BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010496
(509 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/511 (62%), Positives = 415/511 (81%), Gaps = 4/511 (0%)
Query: 3 SSATATILPQPFLPHQQNPNQ-NLTTTPQIS---IQTNNSKSTVNPTVQWTSSISRHCRS 58
++ ++++ P PNQ + P + + +++ S ++P V WTSSI+ HCR+
Sbjct: 8 ATTPSSLVTHPNSSPNSKPNQPTFPSRPHSTKYHLTRSHTHSPIDPIVSWTSSIALHCRN 67
Query: 59 GRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNV 118
G++ EAA EF+RM + G PNHITF+TLLS C DFP + L G IH V KLGLD NV
Sbjct: 68 GQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSIHAYVRKLGLDTENV 127
Query: 119 MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR 178
MVGTAL+DMY+K G++DLA ++FD M V++S +WN MIDG MR G++ A+ +FD+M R
Sbjct: 128 MVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGEAIVLFDQMSER 187
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIH 238
DAISWT+++ GFVK+G FE+ALE FREMQ++GVEPDYVTIISVL ACAN+G LG+GLWI+
Sbjct: 188 DAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLGALGLGLWIN 247
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
R+V+KQDFKDN+K+ N+LID+YSRCGCI ARQVF++M KR+LVSWNS+IVGFA+NG
Sbjct: 248 RFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAE 307
Query: 299 EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCI 358
EALE+FN M+KEGF+PDGVSFTGALTACSH+GL+++GL++FDIMK+ ++SPRIEHYGC+
Sbjct: 308 EALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYGCL 367
Query: 359 VDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD 418
VDLYSRAGRLEDALNV+ NMPMKPNEVVLGSLLAACRT GD+ LAERLMKYL ++DPG D
Sbjct: 368 VDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSD 427
Query: 419 SNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESE 478
SNYVLL+N+YAAVG+WDGA K+R+ MK GI KKPG SSIE+ IHEF+AGD++H+E++
Sbjct: 428 SNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAGDKTHVETQ 487
Query: 479 HIYSMLELLSFDLKLCGYVPETVAGELYEND 509
+IY+ML+ L +L++CGYVPE G+ YE+D
Sbjct: 488 NIYAMLDHLFLELRICGYVPEIEVGKSYEHD 518
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/510 (62%), Positives = 401/510 (78%), Gaps = 12/510 (2%)
Query: 1 MNSSATATILPQ-----PFLPHQ---QNPNQ----NLTTTPQISIQTNNSKSTVNPTVQW 48
M+S + T P PF P NP + +P +I + + ++V+P V W
Sbjct: 1 MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
TSS++R+CR+G+++EAA EFTRM L G PNHITFITLLS CADFPS+ F + +HG
Sbjct: 61 TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
CK GLD +VMVGTAL+DMY+K ++ A VF + VK+S +WN M++G+MR G+IE A
Sbjct: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
+++FDEMP RDAISWTAL+NG +K GY E+ALECF +MQ SGV DYV+II+VL ACA++
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
G L +GLW+HR+V+ Q+FKDN+K+ N+LID+YSRCGCIEFARQVF +M KRTLVSWNSII
Sbjct: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
VGFAVNGF E+LE+F +MQKEGFKPDGVS+TGALTACSHAGL+ GL FD MK ++++
Sbjct: 301 VGFAVNGFADESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
+PRIEHYGCIVDLY RAGRLEDALN++E MPMKPNEVVLGSLLAACRT GD+ LAERLMK
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
Query: 409 YLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFM 468
+L LDP D+ YVLL+N+YAA+GKWDGA +RRTMK RG+QKKPG SS+EI +HEF+
Sbjct: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
Query: 469 AGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
AGD H ++++IYSML+LL +LK+CGYVP
Sbjct: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVP 510
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/510 (62%), Positives = 401/510 (78%), Gaps = 12/510 (2%)
Query: 1 MNSSATATILPQ-----PFLPHQ---QNPNQ----NLTTTPQISIQTNNSKSTVNPTVQW 48
M+S + T P PF P NP + +P +I + + ++V+P V W
Sbjct: 1 MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
TSS++R+CR+G+++EAA EFTRM L G PNHITFITLLS CADFPS+ F + +HG
Sbjct: 61 TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
CK GLD +VMVGTAL+DMY+K ++ A VF + VK+S +WN M++G+MR G+IE A
Sbjct: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
+++FDEMP RDAISWTAL+NG +K GY E+ALECF +MQ SGV DYV+II+VL ACA++
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
G L +GLW+HR+V+ Q+FKDN+K+ N+LID+YSRCGCIEFARQVF +M KRTLVSWNSII
Sbjct: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
VGFAVNGF E+LE+F +MQKEGFKPDGVS+TGALTACSHAGL+ GL FD MK ++++
Sbjct: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
+PRIEHYGCIVDLY RAGRLEDALN++E MPMKPNEVVLGSLLAACRT GD+ LAERLMK
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
Query: 409 YLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFM 468
+L LDP D+ YVLL+N+YAA+GKWDGA +RRTMK RG+QKKPG SS+EI +HEF+
Sbjct: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
Query: 469 AGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
AGD H ++++IYSML+LL +LK+CGYVP
Sbjct: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVP 510
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/514 (63%), Positives = 403/514 (78%), Gaps = 9/514 (1%)
Query: 4 SATATILPQPFLPHQQN--PNQNLTTTPQI------SIQTNNSKSTVNPTVQWTSSISRH 55
+AT T LP P N PNQ +T + ++ +P V WT+SI+ +
Sbjct: 7 NATPTQLPHPPKSPSSNSLPNQTHSTFSNTNTNTNQGLSLRHTTKYNDPIVSWTTSIADY 66
Query: 56 CRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC-LFLGAMIHGLVCKLGLD 114
C+SG + +AA +F +M PNHITFITLLS CA +PS+ + G IH V KLGLD
Sbjct: 67 CKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTAIHAHVRKLGLD 126
Query: 115 RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDE 174
N+VMVGTAL+DMYAK GR++ A + FD M V++ +WN MIDGYMR G E A+++FD
Sbjct: 127 INDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNGKFEDALQVFDG 186
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
+PV++AISWTAL+ GFVK+ Y EEALECFREMQ+SGV PDYVT+I+V+ ACAN+GTLG+G
Sbjct: 187 LPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIAACANLGTLGLG 246
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
LW+HR V+ QDF++NVKV N+LID+YSRCGCI+ ARQVF RM +RTLVSWNSIIVGFAVN
Sbjct: 247 LWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLVSWNSIIVGFAVN 306
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
G EAL YFNSMQ+EGFKPDGVS+TGAL ACSHAGLI +GLR F+ MK++ R+ PRIEH
Sbjct: 307 GLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKRVRRILPRIEH 366
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
YGC+VDLYSRAGRLE+ALNV++NMPMKPNEV+LGSLLAACRT+G+I LAE +M YL++LD
Sbjct: 367 YGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQGNIGLAENVMNYLIELD 426
Query: 415 PGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSH 474
G DSNYVLL+N+YAAVGKWDGA K+RR MK RGIQKKPG SSIEI S IH+F++GD+SH
Sbjct: 427 SGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFSSIEIDSSIHKFVSGDKSH 486
Query: 475 IESEHIYSMLELLSFDLKLCGYVPETVAGELYEN 508
E +HIY+ LE LSF+L+LCGY+P+ E YE+
Sbjct: 487 EEKDHIYAALEFLSFELQLCGYIPDFSGKESYED 520
>gi|296084034|emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/511 (59%), Positives = 399/511 (78%), Gaps = 20/511 (3%)
Query: 3 SSATATILPQPFLPHQQNPNQ-NLTTTPQIS---IQTNNSKSTVNPTVQWTSSISRHCRS 58
++ ++++ P PNQ + P + + +++ S ++P V WTSSI+ HCR+
Sbjct: 8 ATTPSSLVTHPNSSPNSKPNQPTFPSRPHSTKYHLTRSHTHSPIDPIVSWTSSIALHCRN 67
Query: 59 GRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNV 118
G++ EAA EF+RM + G PNHITF+TLLS C DFP + L G IH V KLGLD NV
Sbjct: 68 GQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSIHAYVRKLGLDTENV 127
Query: 119 MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR 178
MVGTAL+DMY+K G++DLA ++FD M V++S +WN MIDG MR G++ A+ +FD+M R
Sbjct: 128 MVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGEAIVLFDQMSER 187
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIH 238
DAISWT+++ GFVK+G FE+ALE FREMQ++GVEPDYVTIISVL ACAN+G LG+GLWI+
Sbjct: 188 DAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLGALGLGLWIN 247
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
R+V+KQDFKDN+K+ N+LID+YSRCGCI ARQVF++M KR+LVSWNS+IVGFA+NG
Sbjct: 248 RFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAE 307
Query: 299 EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCI 358
EALE+FN M+KEG H+GL+++GL++FDIMK+ ++SPRIEHYGC+
Sbjct: 308 EALEFFNLMRKEG----------------HSGLVDEGLQFFDIMKRTRKISPRIEHYGCL 351
Query: 359 VDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD 418
VDLYSRAGRLEDALNV+ NMPMKPNEVVLGSLLAACRT GD+ LAERLMKYL ++DPG D
Sbjct: 352 VDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSD 411
Query: 419 SNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESE 478
SNYVLL+N+YAAVG+WDGA K+R+ MK GI KKPG SSIE+ IHEF+AGD++H+E++
Sbjct: 412 SNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAGDKTHVETQ 471
Query: 479 HIYSMLELLSFDLKLCGYVPETVAGELYEND 509
+IY+ML+ L +L++CGYVPE G+ YE+D
Sbjct: 472 NIYAMLDHLFLELRICGYVPEIEVGKSYEHD 502
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/474 (66%), Positives = 379/474 (79%), Gaps = 2/474 (0%)
Query: 33 IQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD 92
IQ +N +ST TV WTS I+ R+GR+AEAA EF+ MTL G PNHITFI LLSGC D
Sbjct: 25 IQRHN-QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGD 83
Query: 93 FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTW 152
F S LG ++HG CKLGLDRN+VMVGTA++ MY+K GR A +VFD M K+S TW
Sbjct: 84 FTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTW 143
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N MIDGYMR G +++A +MFD+MP RD ISWTA++NGFVK+GY EEAL FREMQISGV+
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PDYV II+ LNAC N+G L GLW+HRYVL QDFK+NV+V N+LIDLY RCGC+EFARQV
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F M KRT+VSWNS+IVGFA NG E+L YF MQ++GFKPD V+FTGALTACSH GL+
Sbjct: 264 FYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLV 323
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
E+GLRYF IMK YR+SPRIEHYGC+VDLYSRAGRLEDAL +V++MPMKPNEVV+GSLLA
Sbjct: 324 EEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLA 383
Query: 393 ACRTKG-DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQK 451
AC G +I+LAERLMK+L DL+ SNYV+L+NMYAA GKW+GA K+RR MKG G++K
Sbjct: 384 ACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKK 443
Query: 452 KPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGEL 505
+PG SSIEI +H FMAGD +H+E+ +I +LEL+S DL+L G V ET+AG+L
Sbjct: 444 QPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVETLAGDL 497
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/438 (69%), Positives = 368/438 (84%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
M L +PNH+TFITLLSGCAD PSQ LG ++H KLGLD N+MVGTAL+DMYAK
Sbjct: 1 MRLLEIDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAK 60
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
G ++L+ + FD ++VK+SF+WN MIDG++R G I A+ +FDEMP R ISWT L+NGF
Sbjct: 61 CGHVELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGF 120
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
VK G FEEALE FR+MQ+S VEPD VTI++VL+ACAN+G LG+GLW+HRY LK+ +DNV
Sbjct: 121 VKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRDNV 180
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
K+CN+LIDLYSRCG IE ARQVF++M +RTLVSWNSII G A NGF EALE+F+ MQK+
Sbjct: 181 KICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQ 240
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
GFKP+ VSFTGALTACSH GL+++GL+YFDIM++++++SPRIEHYGCIVDLYSRAGRLED
Sbjct: 241 GFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLED 300
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
A++VV+NMPMKPNEVV+GSLLAACRT+GD+ LAERLM YLV LDPG DSNYVLL+N+YAA
Sbjct: 301 AMSVVQNMPMKPNEVVVGSLLAACRTRGDVELAERLMNYLVHLDPGADSNYVLLSNIYAA 360
Query: 431 VGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFD 490
VG+WDGA K R TMK GIQKKPG SSIEIG IHEF+AGD+SH ++E IYSMLELLSFD
Sbjct: 361 VGRWDGACKQRMTMKALGIQKKPGFSSIEIGCDIHEFVAGDKSHDKAEDIYSMLELLSFD 420
Query: 491 LKLCGYVPETVAGELYEN 508
LCGYVPE +A ++ N
Sbjct: 421 QALCGYVPEAMAKDMLGN 438
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 70/281 (24%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEA------------------------------ALE-FTR 70
V + W + I R+G+I EA ALE F +
Sbjct: 76 VKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFVKMGLFEEALEWFRK 135
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
M + P+ +T +T+LS CA+ + L LG +H K GL R+NV + +L+D+Y++
Sbjct: 136 MQVSKVEPDRVTIVTVLSACANLGA--LGLGLWVHRYALKKGL-RDNVKICNSLIDLYSR 192
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
G ++LA VF+ M ++ +WN++I G
Sbjct: 193 CGAIELARQVFEKMGERTLVSWNSIIGG-------------------------------L 221
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK-QDFKDN 249
G+ EEALE F MQ G +P+ V+ L AC++ G + GL + +
Sbjct: 222 AANGFTEEALEHFDLMQKQGFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPR 281
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
++ ++DLYSR G +E A V Q M + N ++VG
Sbjct: 282 IEHYGCIVDLYSRAGRLEDAMSVVQNMPMKP----NEVVVG 318
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 91/232 (39%), Gaps = 41/232 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I +G EA F M G PN ++F L+ C+ H
Sbjct: 212 VSWNSIIGGLAANGFTEEALEHFDLMQKQGFKPNDVSFTGALTACS-------------H 258
Query: 106 GLVCKLGLDRNNVMVGT-----------ALLDMYAKFGRMDLATVVFDAMRVK-SSFTWN 153
+ GL ++M ++D+Y++ GR++ A V M +K +
Sbjct: 259 TGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLEDAMSVVQNMPMKPNEVVVG 318
Query: 154 AMIDGYMRRGDIESAVRMFDEM----PVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
+++ RGD+E A R+ + + P D+ ++ L N + G ++ A + M+
Sbjct: 319 SLLAACRTRGDVELAERLMNYLVHLDPGADS-NYVLLSNIYAAVGRWDGACKQRMTMKAL 377
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
G++ ++ IG IH +V D + ++++L S
Sbjct: 378 GIQKK-----------PGFSSIEIGCDIHEFVAGDKSHDKAEDIYSMLELLS 418
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/497 (61%), Positives = 382/497 (76%), Gaps = 9/497 (1%)
Query: 13 PFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMT 72
PF+ Q+ + QI ++ST TV WTS I+ R+GR+AEAA EF+ M
Sbjct: 6 PFVTRQK--------SSQIQRILKLNQSTSETTVSWTSRITLLSRNGRLAEAAKEFSSMR 57
Query: 73 LHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFG 132
L G PNHITFI LLSGC D S LG ++HG CKLGLDR +VMVGTA+L MY+K G
Sbjct: 58 LAGVEPNHITFIALLSGCGDVSSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRG 117
Query: 133 RMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVK 192
R A +VFD M K+S TWN MIDGYMR G + +AV++FDEMP RD ISWTA++NGFVK
Sbjct: 118 RFGKARLVFDFMEDKNSVTWNTMIDGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVK 177
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
+G+ EEAL FREMQISGV+PDYV II+ L AC ++G L GLW+HRYV+ QDFK+N++V
Sbjct: 178 KGFHEEALAWFREMQISGVKPDYVAIIAALAACTHLGALSFGLWVHRYVMNQDFKNNIRV 237
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
N+LIDLY RCGC+EFAR+VF +M KRT+VSWNS+IVGFA NG E+L YF MQ+EGF
Sbjct: 238 SNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGF 297
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
KPD V+FTGALTACSH GL+E+GLRYF MK+ +R+SPRIEHYGC+VDLYSRAGRLEDAL
Sbjct: 298 KPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDAL 357
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKG-DIILAERLMKYLVDLDPGVDSNYVLLANMYAAV 431
NVV++MPMKPNEVV+GSLLAACR G + +LAERL+K+L DL+ SNYV+L+NMYAA
Sbjct: 358 NVVQSMPMKPNEVVIGSLLAACRNHGNNTVLAERLVKHLSDLNVKSHSNYVILSNMYAAD 417
Query: 432 GKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
G W+GA K+RR MKG G++K+PG SS+EI H FMAGD +H+E+ +I +LEL+S DL
Sbjct: 418 GIWEGASKMRRKMKGLGLKKQPGFSSVEIDDCTHVFMAGDSAHVETAYIREVLELISSDL 477
Query: 492 KLCGYVPETVAGELYEN 508
+L G V ET+AG+L+ +
Sbjct: 478 RLQGCVFETLAGDLFND 494
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/469 (64%), Positives = 372/469 (79%), Gaps = 1/469 (0%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
++ST TV WTS I+ R+GR+AEAA EF+ M L G PNHITFI +LSGC DFPS
Sbjct: 29 NQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSGS 88
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
LG ++HG CKLGLDRN+VMVGTA++ MY+K GR+ A VFD M K+S TWN MID
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMID 148
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GYMR G +++A +MFD+MP RD ISWTA++NGFV +G+ EEAL FREMQISGV+PDYV
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYVA 208
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
II+ LNAC N+G L GLW+HRYV+ QDFK+NV+V N+LIDLY RCGC+EFARQVF +M
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKME 268
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
KRT+VSWNS+IVGFA NG E+L YF MQ+E FKPD V+FTGALTACSH GL+E+GLR
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF IM YR+SPRIEHYGC+VDLYSRAGRLEDAL +V++MPMKPNEVV+GSLLAACR
Sbjct: 329 YFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACRNH 388
Query: 398 G-DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
G + +LAE+LMK+L DL+ SNYV+L+NMYAA GKW+GA K+RR MKG G++K+PG S
Sbjct: 389 GNNTVLAEKLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGEL 505
SIEI H FMAGD +H+E+ +I +L+L+S +L+L G V ET+ G+L
Sbjct: 449 SIEIDDCTHVFMAGDSAHVETTNICEVLKLISSNLRLQGCVVETLPGDL 497
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 163/358 (45%), Gaps = 79/358 (22%)
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R+ ++ ++ + +SWT+ + + G EA + F +M+++GVEP+++T I+
Sbjct: 17 RKRHANPKIQRLNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIA 76
Query: 221 VLNACAN---------------------------VGTLGIGLWIHRYVLKQ-----DFKD 248
+L+ C + VGT IG++ R +K+ D+ +
Sbjct: 77 ILSGCGDFPSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYME 136
Query: 249 --NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
N NT+ID Y R G ++ A ++F +M +R L+SW ++I GF GF EAL +F
Sbjct: 137 DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFRE 196
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGL---RYFDIMKKIYRVSPRIEHYGCIVDLYS 363
MQ G KPD V+ AL AC++ G + GL RY +M + ++ + R+ + ++DLY
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRY--VMSQDFKNNVRVSN--SLIDLYC 252
Query: 364 RAGRLEDALNVVENMP----------------------------------MKPNEVVLGS 389
R G +E A V + M KP+ V
Sbjct: 253 RCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTG 312
Query: 390 LLAACRTKGDIILAERLMKYLVD---LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
L AC G + R + ++ + P ++ +Y L ++Y+ G+ + A K+ ++M
Sbjct: 313 ALTACSHVGLVEEGLRYFQIMISDYRISPRIE-HYGCLVDLYSRAGRLEDALKLVQSM 369
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/468 (64%), Positives = 371/468 (79%), Gaps = 1/468 (0%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
++ST V WTS I+ R+GR+AEAA EF+ M L G PNHITFI LLSGC DF S
Sbjct: 18 NQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSGS 77
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
LG ++HG CKLG DR +VMVGTA+L MY+K R+ A +VFD M K+S TWN MID
Sbjct: 78 EALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMID 137
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GYMR G +++AV+MFD+MP RD ISWTA++NGFVK+G+ EEAL FREMQISGV+PDYV
Sbjct: 138 GYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVA 197
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
II+ LNAC N+G L GLW+HRYV+ QDFK+NVKV N+LIDLY RCGC+EFAR+VF +M
Sbjct: 198 IIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKME 257
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
KRT+VSWNS+IVGFA NG E+L YF MQ+EGFKPD V+FTGALTACSH GL+E+GLR
Sbjct: 258 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLR 317
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF MK+ +R+SPRIEHYGC+VDLYSRAGRLE+AL VV++MPMKPNEVV+GSLLAACRT
Sbjct: 318 YFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQSMPMKPNEVVIGSLLAACRTH 377
Query: 398 G-DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
G + +LAERLMK+L D++ SNYV+L+NMYAA GKW+GA ++RR MKG G++K+PG S
Sbjct: 378 GNNTVLAERLMKHLSDVNVKGHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQPGFS 437
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGE 504
SIEI H FMAGD +H+E+ I +LEL+S DL+L G ET+AG+
Sbjct: 438 SIEIDDCTHVFMAGDSAHVETADIREVLELVSSDLQLQGCEDETLAGD 485
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 184/426 (43%), Gaps = 96/426 (22%)
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R+ + ++ ++ +SWT+ + + G EA + F +M+++GVEP+++T I+
Sbjct: 6 RKHHADPKIQKLNQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIA 65
Query: 221 VLNACANV--GTLGIGLWIHRYVLKQ------------------------------DFKD 248
+L+ C + G+ +G +H Y K D+ +
Sbjct: 66 LLSGCGDFSSGSEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYME 125
Query: 249 --NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
N NT+ID Y R G ++ A ++F +M +R L+SW ++I GF GF EAL +F
Sbjct: 126 DKNSVTWNTMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFRE 185
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGL---RYFDIMKKIYRVSPRIEHYGCIVDLYS 363
MQ G KPD V+ AL AC++ G + GL RY +M + ++ + ++ + ++DLY
Sbjct: 186 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRY--VMSQDFKNNVKVSN--SLIDLYC 241
Query: 364 RAGRLEDALNVVENMP----------------------------------MKPNEVVLGS 389
R G +E A V + M KP+ V
Sbjct: 242 RCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTG 301
Query: 390 LLAACRTKGDIILAERLMKYLVDL------DPGVDSNYVLLANMYAAVGKWDGAGKIRRT 443
L AC G L E ++Y + P ++ +Y L ++Y+ G+ + A K+ ++
Sbjct: 302 ALTACSHVG---LVEEGLRYFQTMKRDHRISPRIE-HYGCLVDLYSRAGRLEEALKVVQS 357
Query: 444 MKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAG 503
M KP + + IGS +A R+H + + L D+ + G+ +
Sbjct: 358 MP-----MKP--NEVVIGS----LLAACRTHGNNTVLAERLMKHLSDVNVKGHSNYVILS 406
Query: 504 ELYEND 509
+Y D
Sbjct: 407 NMYAAD 412
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/468 (64%), Positives = 369/468 (78%), Gaps = 1/468 (0%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
++ST TV WTS I+ R+GR+AEAA F+ M L G PNHITFI LLSGC DFPS
Sbjct: 20 NQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSGS 79
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L ++HG CKLGLDR +VMVGTA++ MY+K G + A +VFD M +S TWN MID
Sbjct: 80 ETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMID 139
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GYMR G +++AV+MFD+MP RD ISWTA++NGFVK+G+ EEAL FREMQISGV PDYV
Sbjct: 140 GYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVA 199
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
II+ LNAC N+G L GLW+HRYV+ QDFK+NV+V N+LIDLY RCGC+EFAR+VF +M
Sbjct: 200 IIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKME 259
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
KRT+VSWNS+IVGFA NG E+L YF MQ+EGFKPD V+FTGALTACSH GL+E+GLR
Sbjct: 260 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLR 319
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF MK+ Y +SPRIEHYGC+VDLYSRAGRLEDAL V+E+MPMKPNEVV+GSLLAACRT
Sbjct: 320 YFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEVVIGSLLAACRTH 379
Query: 398 G-DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
G + +LAERLMK+L DL+ SNYV+L+NMYAA GKW+GA ++RR MKG G++K+PG S
Sbjct: 380 GNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQPGFS 439
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGE 504
SIEI H FMAGD +H+E+ I +LEL+S DL+L G V ET AG+
Sbjct: 440 SIEIDDCTHVFMAGDSAHVETAIIREVLELVSSDLRLQGCVVETPAGD 487
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 160/352 (45%), Gaps = 83/352 (23%)
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN- 227
++ ++ +SWT+ + + G EA + F +M++SGVEP+++T I++L+ C +
Sbjct: 16 IQRLNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDF 75
Query: 228 --------------------------VGTLGIGLWIHRYVLKQ-----DFKDNVK--VCN 254
VGT IG++ R +K+ D+ +++ N
Sbjct: 76 PSGSETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWN 135
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
T+ID Y R G ++ A ++F +M +R L+SW ++I GF GF EAL +F MQ G +P
Sbjct: 136 TMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRP 195
Query: 315 DGVSFTGALTACSHAGLIEDGL---RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
D V+ AL AC++ G + GL RY +M + ++ + R+ + ++DLY R G +E A
Sbjct: 196 DYVAIIAALNACTNLGALSFGLWVHRY--VMNQDFKNNVRVSN--SLIDLYCRCGCVEFA 251
Query: 372 LNVVENMP----------------------------------MKPNEVVLGSLLAACRTK 397
V + M KP+ V L AC
Sbjct: 252 REVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHV 311
Query: 398 GDIILAERLMKYLVDL--DPGVD---SNYVLLANMYAAVGKWDGAGKIRRTM 444
G L E ++Y + D G+ +Y L ++Y+ G+ + A K+ +M
Sbjct: 312 G---LVEEGLRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESM 360
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 299/470 (63%), Positives = 369/470 (78%), Gaps = 1/470 (0%)
Query: 37 NSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQ 96
+++ST V WTS I+ RS +AEAA EF M L G P HITFI LLSGC DFPS
Sbjct: 3 HNQSTSETIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSG 62
Query: 97 CLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMI 156
LG ++HG CKLGLDRN+VMVGTA+L MY+K GR+ A +VFD M K+S TWN MI
Sbjct: 63 SETLGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMI 122
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
DGYMR G + +AV++FD+MP D ISWTA++NGFVK+G+ EEAL FREMQISGV+PDYV
Sbjct: 123 DGYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYV 182
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
II+ LNAC N+G L +GLW+HRYV+ QDFK+NV+V N+LIDLY RCGC+EFAR+VF +M
Sbjct: 183 AIIAALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKM 242
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
KRT+VSWNS+IVGFA NG E+L YF MQ+EGFKP+ V+FTGALTACSH GL+++GL
Sbjct: 243 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEGL 302
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
R+F MK+ Y +SPRIEHYGC+VDLYSRAGRLEDAL VV++MPMKPNEVV+GSLLAACR
Sbjct: 303 RFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACRN 362
Query: 397 KG-DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
G + +LAERLMK+L DL+ SNYV+L+NMYAA KW+GA ++RR MKG G++K+PG
Sbjct: 363 HGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADAKWEGASRMRRKMKGLGLKKQPGF 422
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGEL 505
SSIEI H FMAGD +H+E+ +I +LEL+S DL L G V E +AG+L
Sbjct: 423 SSIEIDDCTHVFMAGDSAHVETAYIREVLELISSDLGLQGCVLENLAGDL 472
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 299/472 (63%), Positives = 365/472 (77%), Gaps = 1/472 (0%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
++ST V WTS I+ R GR+AEA EF+ M L G PNHITFI LLS C +FPS
Sbjct: 14 NQSTSETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFPSGS 73
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
LG ++HG CKLGL+R++VMVGTA+L MY+K G + A +VFD + K+S TWN MID
Sbjct: 74 EGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMID 133
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GYMR G +++AV +FD+MP RD ISWTA++ GFVK+G+ EEAL FREMQISGV PDYV
Sbjct: 134 GYMRNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVA 193
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
IIS + AC N+G L GLW+HRYVL QDF++NV+V N+LIDLY RCGC+EFARQVF +M
Sbjct: 194 IISAVAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKME 253
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
KRT+VSWNS+IVGFA NG E+L YF MQ+EGF PDGV+FTGALTACSH GL+E+G +
Sbjct: 254 KRTVVSWNSVIVGFAANGNANESLVYFRKMQREGFTPDGVTFTGALTACSHVGLVEEGFQ 313
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF +MK YR+SPRIEHYGC+VDLYSRAGRLEDA VVE+MPMKPNEVV+GSLLAACR
Sbjct: 314 YFQMMKHDYRISPRIEHYGCLVDLYSRAGRLEDAFIVVESMPMKPNEVVIGSLLAACRNH 373
Query: 398 GD-IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
G+ ILAERLMKY+ DLD SNYV+L+NMYAA GKW+GA K+RR MKG G++K+PG S
Sbjct: 374 GNHTILAERLMKYITDLDVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGYS 433
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEN 508
SIEI H FMAGD +H+E+ +I +LEL+S DL+L V ET A +L +
Sbjct: 434 SIEIDDCTHVFMAGDSAHVETAYIREVLELISSDLRLQCCVIETPAIDLVHD 485
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 129/269 (47%), Gaps = 45/269 (16%)
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R+ ++ ++ +SWT+ + + G EA+ F +M+++G+EP+++T I+
Sbjct: 2 RKNHANPKIQKLNQSTSETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIA 61
Query: 221 VLNACANV--GTLGIGLWIHRYVLKQDFK------------------------------- 247
+L+AC N G+ G+G +H Y K +
Sbjct: 62 LLSACGNFPSGSEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIE 121
Query: 248 -DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
N NT+ID Y R G ++ A VF +M R L+SW ++I GF GF EAL +F
Sbjct: 122 DKNSVTWNTMIDGYMRNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFRE 181
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGL---RYFDIMKKIYRVSPRIEHYGCIVDLYS 363
MQ G PD V+ A+ AC++ G + GL RY ++ + +R + R+ + ++DLY
Sbjct: 182 MQISGVNPDYVAIISAVAACTNLGALSFGLWVHRY--VLSQDFRNNVRVSN--SLIDLYC 237
Query: 364 RAGRLEDALNVVENMPMKP----NEVVLG 388
R G +E A V + M + N V++G
Sbjct: 238 RCGCVEFARQVFDKMEKRTVVSWNSVIVG 266
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust.
Identities = 296/472 (62%), Positives = 367/472 (77%), Gaps = 4/472 (0%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
++ST V WTS I+ R R+AEAA EF+ M L G PNHITFI+LLS C +FPS
Sbjct: 26 NQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFISLLSACGNFPSGS 85
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L ++HG CKLGLDR++VMVGTA+L MY+K G + A +VFD M K+S TWN MID
Sbjct: 86 EALSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDKNSVTWNTMID 145
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GYMR G +++AV++FDEMP RD ISWTA++ GFVK+G+ EEAL FREMQISGV PDYV
Sbjct: 146 GYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVA 205
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
II+ L AC N+G L GLW HRYV+ QDF++NV+V N+LIDLY RCGC+EFARQVF M
Sbjct: 206 IIAALAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTME 265
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
KRT+VSWNS+IVGFA NG E+L YF MQ+EGFKPD V+FTGALTACSH GL+E+G +
Sbjct: 266 KRTVVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGFQ 325
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF +MK YR+SPRIEH+GC+VDLYSRAGRLEDA+ VVE+MPMKPNEVV+GSLLAACR
Sbjct: 326 YFQMMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESMPMKPNEVVIGSLLAACRNH 385
Query: 398 GD-IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
G+ ILAERLMK++ DLD SNYV+L+NMYAA GKW+GA K+RR MKG G++K+PG S
Sbjct: 386 GNHTILAERLMKHISDLDVKGHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGYS 445
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEN 508
SIEI H FMAGD +H+E+ +I +LE++S+DL+L G V +A +L ++
Sbjct: 446 SIEIDDYTHVFMAGDNAHVETAYIREVLEVISYDLRLQGCV---IASDLVDD 494
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 134/269 (49%), Gaps = 45/269 (16%)
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R+ ++ ++ ++ +SWT+ + + EA F +M+++G+EP+++T IS
Sbjct: 14 RKNNVNPKIQKLNQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFIS 73
Query: 221 VLNACAN---------------------------VGTLGIGLWIHRYVLKQ-----DFKD 248
+L+AC N VGT +G++ R +++ D+ +
Sbjct: 74 LLSACGNFPSGSEALSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYME 133
Query: 249 --NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
N NT+ID Y R G ++ A +VF M +R L+SW ++I GF GF EAL +F
Sbjct: 134 DKNSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFRE 193
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGL---RYFDIMKKIYRVSPRIEHYGCIVDLYS 363
MQ G PD V+ AL AC++ G + GL RY ++ + +R + R+ + ++DLY
Sbjct: 194 MQISGVNPDYVAIIAALAACTNLGALSFGLWAHRY--VVSQDFRNNVRVSN--SLIDLYC 249
Query: 364 RAGRLEDALNVVENMPMKP----NEVVLG 388
R G +E A V + M + N V++G
Sbjct: 250 RCGCVEFARQVFDTMEKRTVVSWNSVIVG 278
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 294/495 (59%), Positives = 382/495 (77%), Gaps = 9/495 (1%)
Query: 11 PQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTR 70
P F P NPN+N T + + K N TV WTSSIS HC++ +AA EF +
Sbjct: 26 PSTFSP-PNNPNKNQTLSLK-------HKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQ 77
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQC-LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA 129
M PNHIT ITLLS CA PS+ + GA +H K G N+VMVGTAL+DMYA
Sbjct: 78 MLEAEVEPNHITLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYA 137
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
K G++D A +VFD M V++ +WN MIDGYM+ GD++ A+++FD++PV++ +SWT ++ G
Sbjct: 138 KCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGG 197
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
FVK+ +EEALECFREMQ++GV PD+VT+I++++ACAN+G LG+GLW+HR V+K++F+DN
Sbjct: 198 FVKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDN 257
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
VKV N+LID+Y+RCGCIE ARQVF M +R LVSWNSIIVGFAVNG +AL +F SM+K
Sbjct: 258 VKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKK 317
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
EG +P+GVS+T ALTACSHAGLI++GL+ F +K+ +R SPRIEHYGC+VDLYSRAGRL+
Sbjct: 318 EGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLK 377
Query: 370 DALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYA 429
+A +V++ MPM PNEVVLGSLLAACRT+GD+ LAE++MKY V+L PG DSNYVL +N+YA
Sbjct: 378 EAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGGDSNYVLFSNIYA 437
Query: 430 AVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSF 489
AVGKWDGA K+RR MK RG+QK SSIEI SGIH+F++GD+ H E+++IYS LELLSF
Sbjct: 438 AVGKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHKFVSGDKYHEENDYIYSALELLSF 497
Query: 490 DLKLCGYVPETVAGE 504
+L L GYVP+ E
Sbjct: 498 ELHLYGYVPDFSGKE 512
>gi|347954504|gb|AEP33752.1| chloroplast biogenesis 19, partial [Lobularia maritima]
Length = 496
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 294/480 (61%), Positives = 365/480 (76%), Gaps = 1/480 (0%)
Query: 23 QNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHIT 82
Q TT K ++ T+ WTS I+ R+GR+AEAA EF+ M G PNHIT
Sbjct: 10 QTHFTTRNDQTNAKTQKLNLSTTISWTSRITLLSRNGRLAEAAKEFSDMRFAGVEPNHIT 69
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
FI LLSGC DF S G ++HG CKLGLDRN+VMVGTA++ MY+K GR+ A +VFD
Sbjct: 70 FIALLSGCGDFSSGSESFGDLLHGYACKLGLDRNHVMVGTAIIGMYSKHGRVSKARLVFD 129
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
M K+S TWN MIDGYMR+G I+ A ++FDEMP R ISWTA++NGFVK+G+ EEAL
Sbjct: 130 HMEGKNSMTWNTMIDGYMRKGKIDDAYKLFDEMPERGLISWTAMINGFVKKGFHEEALVW 189
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
FREMQ SGVEPDYV II+VL AC N+G L GLW+HRY++ +DF++NV+V N+ IDL+ R
Sbjct: 190 FREMQSSGVEPDYVAIIAVLAACTNLGALSFGLWVHRYLVSRDFRNNVRVNNSSIDLHCR 249
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
CGC+E A+ VF M KRT+VSWNS+IV F+ NG E+L YF MQ+EGFKP+ V+FTGA
Sbjct: 250 CGCVELAQPVFDHMEKRTVVSWNSVIVVFSANGHADESLVYFRRMQEEGFKPNAVTFTGA 309
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP 382
LTACSH GL+E+GLRYF MKK YR+SPRIEHYGC+VDLYSRAGRLEDALNVV++MPMKP
Sbjct: 310 LTACSHVGLVEEGLRYFQTMKKEYRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKP 369
Query: 383 NEVVLGSLLAACRTKG-DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
NEVV+GSLLAACRT G + +LAERLMK+L D + SNYV+L+NMYAA GKW+GA K+R
Sbjct: 370 NEVVIGSLLAACRTHGNNTVLAERLMKHLSDTNVKSHSNYVILSNMYAADGKWEGASKMR 429
Query: 442 RTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
R MKG G++K+PG SSIEI H FMAGD +H+E+ +I +LE+LS D++ G V ET+
Sbjct: 430 RKMKGLGLKKQPGFSSIEIDDCTHVFMAGDSAHVETGYIREVLEILSSDMQSQGCVDETI 489
>gi|347954508|gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium officinale]
Length = 447
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 292/443 (65%), Positives = 351/443 (79%), Gaps = 1/443 (0%)
Query: 64 AALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTA 123
A F+ M G PNHITFI LLSGC DFPS LG ++HG CKLGLDR +VMVGTA
Sbjct: 2 GAQGFSDMRFAGVEPNHITFIALLSGCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGTA 61
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
+L MY+K GR A ++FD M K+S TWN MIDGYMR G + +AV++FDEM RD ISW
Sbjct: 62 ILGMYSKRGRFRKARLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISW 121
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
TA++NGFVK+G+ EEAL FREMQISGV+PDYV II+ L AC N+G L GLWIHRYV+
Sbjct: 122 TAMVNGFVKKGFHEEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVMS 181
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
QDFK+NV+V N+LIDLY RCGC+EFARQVF +M KRT+VSWNS+IVGFA NG E+L Y
Sbjct: 182 QDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLFY 241
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F MQ+EGFKPD V+FTGALTACSH GL+E+GLRYF MK+ YR+SPRIEHYGCIVDLYS
Sbjct: 242 FRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVDLYS 301
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG-DIILAERLMKYLVDLDPGVDSNYV 422
RAGRLEDAL VV++MPMKPNEVV+GSLLAAC+ G + +LAERLMK+L DL+ SNYV
Sbjct: 302 RAGRLEDALKVVQSMPMKPNEVVIGSLLAACKNHGNNTLLAERLMKHLSDLNVKSHSNYV 361
Query: 423 LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS 482
+L+NMYAA GKW+GA K+RR MKG G++K+PG SSIEI H FMAGD +H+E+ +I
Sbjct: 362 ILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDECTHVFMAGDSAHVETANIRE 421
Query: 483 MLELLSFDLKLCGYVPETVAGEL 505
+L L+S DL+L G V ET+AG+L
Sbjct: 422 ILGLMSSDLRLQGCVVETLAGDL 444
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 86/208 (41%), Gaps = 26/208 (12%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I +G E+ F +M G P+ +TF L+ C+ +G +
Sbjct: 219 VVSWNSVIVGFAANGNAHESLFYFRKMQEEGFKPDAVTFTGALTACSH-------VGLVE 271
Query: 105 HGLVCKLGLDRN-----NVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDG 158
GL + R+ + ++D+Y++ GR++ A V +M +K + +++
Sbjct: 272 EGLRYFQTMKRDYRISPRIEHYGCIVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAA 331
Query: 159 YMRRGD----IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ------- 207
G+ E ++ ++ V+ ++ L N + G +E A + R+M+
Sbjct: 332 CKNHGNNTLLAERLMKHLSDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQ 391
Query: 208 --ISGVEPDYVTIISVLNACANVGTLGI 233
S +E D T + + A+V T I
Sbjct: 392 PGFSSIEIDECTHVFMAGDSAHVETANI 419
>gi|347954494|gb|AEP33747.1| chloroplast biogenesis 19, partial [Brassica oleracea]
Length = 485
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 303/493 (61%), Positives = 371/493 (75%), Gaps = 13/493 (2%)
Query: 13 PFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMT 72
PF+ +PN P++ + N +ST TV WTS I+ R+GR+AEAA EFT M
Sbjct: 5 PFISRNNHPN------PKLHQKLN--QSTSETTVSWTSRITLLSRNGRLAEAAKEFTAMR 56
Query: 73 LHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFG 132
L G PNHIT I LLSGCAD C G +HG CKLGLDRN VMVGTA+L MY+K
Sbjct: 57 LAGVEPNHITLIALLSGCAD----CEPFGDSLHGYACKLGLDRNQVMVGTAILGMYSKRR 112
Query: 133 RMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVK 192
R A +VFD + K+S TWN MIDGYMR G ++ A ++FDEMP RD ISWTA++NGFVK
Sbjct: 113 RFRKARLVFDRVEDKNSVTWNTMIDGYMRSGRVDDAAKVFDEMPERDLISWTAMINGFVK 172
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
+G EEAL FREMQ+SGV+PDYV +I+ L ACAN+G L GLW+HR+V+ QDFK+NV+V
Sbjct: 173 KGLHEEALAWFREMQVSGVKPDYVAVIAALAACANLGALSFGLWVHRFVVSQDFKNNVRV 232
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
N+LIDLY RCGC+EFARQVF M KRT+VSWNS+IVGFA NG E+L YF MQ+E F
Sbjct: 233 SNSLIDLYCRCGCVEFARQVFDEMEKRTVVSWNSVIVGFAANGHAHESLVYFRRMQEERF 292
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
KPD V+FTGALTACSH GL+E+G+RYF+ MK+ YR+SPRIEHYGC+VDLYSRAGRLE+AL
Sbjct: 293 KPDAVTFTGALTACSHVGLVEEGVRYFEAMKRDYRISPRIEHYGCLVDLYSRAGRLEEAL 352
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKG-DIILAERLMKYLVDLDPGVDSNYVLLANMYAAV 431
VVE+MPMKPNEVV+GSLLAACRT G D LAER+MK L +L SNYV+L+NMYAA
Sbjct: 353 KVVESMPMKPNEVVIGSLLAACRTHGNDTELAERMMKRLSELKVKGHSNYVILSNMYAAD 412
Query: 432 GKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
G+W+GA K+RR MKG G++K+PG SSIEI H FMAGD +H+E+ +I +LEL+S D
Sbjct: 413 GQWEGASKMRRKMKGLGLKKQPGFSSIEIDDRTHVFMAGDSAHVENGYIREVLELISSDS 472
Query: 492 KLCGYVPETVAGE 504
+L V ET+ G+
Sbjct: 473 RLQCSVVETLGGD 485
>gi|347954490|gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
Length = 435
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 282/427 (66%), Positives = 341/427 (79%), Gaps = 1/427 (0%)
Query: 67 EFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD 126
EF+ M L G PNHITFI LLSG D S LG ++HG CKLGLDR +VMVGTA+L
Sbjct: 1 EFSGMRLAGVEPNHITFIALLSGWGDLLSGSEALGDLLHGYACKLGLDRAHVMVGTAILG 60
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTAL 186
MY+K GR A +VFD M K+S TWN MIDGYMR G ++ AV++FDEMP RD ISWTA+
Sbjct: 61 MYSKRGRFRKARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAM 120
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
+NGFVK+G+ EEAL FREMQISGV+PDYV II+ L AC N+G L GLWIHRYV+ QDF
Sbjct: 121 INGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVVSQDF 180
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
K+NV+V N+LIDLY RCGC+EFARQVF +M KRT+VSWNS+IVGFA NG E+L YF
Sbjct: 181 KNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVYFRK 240
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
MQ+EGFKP+ V+FTGAL AC+H GL+E+GLRYF MK+ YR+SPRIEHYGC+VDLYSRAG
Sbjct: 241 MQEEGFKPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLYSRAG 300
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKG-DIILAERLMKYLVDLDPGVDSNYVLLA 425
RLEDAL VV++MPMKPNEVV+GSLLAACRT+G + +LAER+MK+L DL+ SNYV+L+
Sbjct: 301 RLEDALKVVQSMPMKPNEVVIGSLLAACRTQGNNTVLAERVMKHLSDLNVKSHSNYVILS 360
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
NMYAA GKW+GA K+RR MKG G++K+PG SSIEI H FMAGD +H+E+ +I +LE
Sbjct: 361 NMYAADGKWEGASKMRRKMKGLGLKKEPGFSSIEIDDCTHVFMAGDNTHVETTNIREVLE 420
Query: 486 LLSFDLK 492
LLS D +
Sbjct: 421 LLSSDTR 427
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 19/186 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I +G E+ + F +M G PN +TF L+ C +G +
Sbjct: 215 VVSWNSVIVGFAANGHAHESLVYFRKMQEEGFKPNAVTFTGALAACNH-------VGLVE 267
Query: 105 HGLVCKLGLDRN-----NVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDG 158
GL + R+ + L+D+Y++ GR++ A V +M +K + +++
Sbjct: 268 EGLRYFQSMKRDYRISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAA 327
Query: 159 YMRRGD----IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV--E 212
+G+ E ++ ++ V+ ++ L N + G +E A + R+M+ G+ E
Sbjct: 328 CRTQGNNTVLAERVMKHLSDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKE 387
Query: 213 PDYVTI 218
P + +I
Sbjct: 388 PGFSSI 393
>gi|347954512|gb|AEP33756.1| chloroplast biogenesis 19, partial [Raphanus sativus]
Length = 476
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 295/501 (58%), Positives = 355/501 (70%), Gaps = 33/501 (6%)
Query: 6 TATILPQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAA 65
+AT+ PF+ + N Q ST TV WTS I+ R+GR+AEAA
Sbjct: 4 SATVTAHPFISRNNHANPKTHHLNQ---------STPETTVSWTSRITLLSRNGRLAEAA 54
Query: 66 LEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALL 125
E T M L G PNHIT I LLSGC+D C LG +HG CKLG DRN+VMVGTA+L
Sbjct: 55 KELTAMRLAGVEPNHITLIALLSGCSD----CEPLGDSLHGYACKLGFDRNHVMVGTAIL 110
Query: 126 DMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTA 185
MY+K R A +VFD M +S TWN MIDGY R D IS T
Sbjct: 111 GMYSKRRRFRKARLVFDRMGDXNSVTWNTMIDGYXR-----------------DLISXTX 153
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
++NGFVK+G EEAL FREMQ+SGVEPDYV II+ L AC N+G L GLW+HRYV+ QD
Sbjct: 154 MINGFVKKGLNEEALAWFREMQVSGVEPDYVAIIAALAACTNLGALSFGLWVHRYVVSQD 213
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
FK+NV+V N+LIDLY RCGC+EFARQVF +M KRT+VSWNS+IVGFA NG E+L YF
Sbjct: 214 FKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVYFR 273
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
MQ+E FKPD V+FTGALTACSH GL+E+G+RYF+ MK+ YR+SPRIEHYGC+VDLYSRA
Sbjct: 274 KMQEERFKPDAVTFTGALTACSHVGLVEEGVRYFEAMKRDYRISPRIEHYGCLVDLYSRA 333
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKG-DIILAERLMKYLVDLDPGVDSNYVLL 424
GRLEDAL VVE+MPMKPNEVV+GSLLAACRT G D LAER+MK+L +L SNYV+L
Sbjct: 334 GRLEDALKVVESMPMKPNEVVIGSLLAACRTHGNDTELAERMMKHLSELKVKSHSNYVIL 393
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
+NMYAA GKW+GA K+RR MKG G++K+PG SSIEI H FMAGD +H+E+ +I ++
Sbjct: 394 SNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDRTHVFMAGDSAHVETAYIREVV 453
Query: 485 ELLSFDLKLCGYVPE--TVAG 503
EL+S D +L G V E T+AG
Sbjct: 454 ELISSDSRLQGSVVELSTLAG 474
>gi|87240913|gb|ABD32771.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 497
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 282/500 (56%), Positives = 367/500 (73%), Gaps = 29/500 (5%)
Query: 11 PQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTR 70
P F P NPN+N T + + K N TV WTSSIS HC++ +AA EF +
Sbjct: 26 PSTFSP-PNNPNKNQTLSLK-------HKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQ 77
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQC-LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA 129
M PNHIT ITLLS CA PS+ + GA +H K G N+VMVGTAL+DMYA
Sbjct: 78 MLEAEVEPNHITLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYA 137
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
K G++D A +VFD M V++ +WN MIDGYM+ GD++ A+++FD++PV++ +SWT ++ G
Sbjct: 138 KCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGG 197
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
FVK+ +EEALECFREMQ++GV PD+VT+I++++ACAN+G LG+GLW+HR V+K++F+DN
Sbjct: 198 FVKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDN 257
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
VKV N+LID+Y+RCGCIE ARQVF M +R LVSWNSIIVGFAVNG +AL +F
Sbjct: 258 VKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFF----- 312
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
CSHAGLI++GL+ F +K+ +R SPRIEHYGC+VDLYSRAGRL+
Sbjct: 313 ---------------PCSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLK 357
Query: 370 DALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYA 429
+A +V++ MPM PNEVVLGSLLAACRT+GD+ LAE++MKY V+L PG DSNYVL +N+YA
Sbjct: 358 EAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGGDSNYVLFSNIYA 417
Query: 430 AVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSF 489
AVGKWDGA K+RR MK RG+QK SSIEI SGIH+F++GD+ H E+++IYS LELLSF
Sbjct: 418 AVGKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHKFVSGDKYHEENDYIYSALELLSF 477
Query: 490 DLKLCGYVPETVAGELYEND 509
+L L GYVP+ E Y +D
Sbjct: 478 ELHLYGYVPDFSGKESYVDD 497
>gi|347954488|gb|AEP33744.1| chloroplast biogenesis 19, partial [Aethionema grandiflorum]
Length = 413
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 264/406 (65%), Positives = 321/406 (79%), Gaps = 1/406 (0%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
M L G PNHITFI L+SGC DFP+ LG ++HG CKLGLDR +VMVGTA+L MY+K
Sbjct: 8 MRLAGFEPNHITFIALISGCGDFPTGSETLGDLLHGYACKLGLDRTHVMVGTAILGMYSK 67
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
R A VFD M K+S TWN MID YMR G ++ AV++FDEMP D ISWTA++NGF
Sbjct: 68 RCRFGKARCVFDYMEDKNSVTWNTMIDAYMRSGKVDRAVKLFDEMPDPDLISWTAMINGF 127
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
VK+G+ EEAL FREMQISGV+PDYV II+ L AC N+G L GLW+HRYVL QDFK+NV
Sbjct: 128 VKKGFHEEALVWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWVHRYVLSQDFKNNV 187
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
+V N+LIDLY RCGC+EFAR+VF +M KRT+VSWNS+IVG A NG E+L YF MQ+E
Sbjct: 188 RVNNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGSAANGNAHESLVYFRKMQEE 247
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
GF PD V+FTGALTACSH GL+E+G++YF MK+ Y++SPRIEHYGC+VDLYSRAGRLED
Sbjct: 248 GFNPDAVTFTGALTACSHVGLVEEGIQYFQTMKRDYKISPRIEHYGCLVDLYSRAGRLED 307
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKG-DIILAERLMKYLVDLDPGVDSNYVLLANMYA 429
AL +V++M MKPNEVV+GSLLAACRT G + LAERLMK+L +++ SNYV+L+NMYA
Sbjct: 308 ALKLVQSMSMKPNEVVIGSLLAACRTHGNNTELAERLMKHLSEMNVKGHSNYVILSNMYA 367
Query: 430 AVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
A GKW+GA K+RR MKG G++K+PG SSIEI H FMAGD +H+
Sbjct: 368 ADGKWEGAXKMRRKMKGLGLKKQPGFSSIEIDDHTHVFMAGDSAHV 413
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 19/185 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I +G E+ + F +M G NP+ +TF L+ C+ +G +
Sbjct: 219 VSWNSVIVGSAANGNAHESLVYFRKMQEEGFNPDAVTFTGALTACSH-------VGLVEE 271
Query: 106 GLVCKLGLDRN-----NVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDGY 159
G+ + R+ + L+D+Y++ GR++ A + +M +K + +++
Sbjct: 272 GIQYFQTMKRDYKISPRIEHYGCLVDLYSRAGRLEDALKLVQSMSMKPNEVVIGSLLAAC 331
Query: 160 MRRGD----IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV--EP 213
G+ E ++ EM V+ ++ L N + G +E A + R+M+ G+ +P
Sbjct: 332 RTHGNNTELAERLMKHLSEMNVKGHSNYVILSNMYAADGKWEGAXKMRRKMKGLGLKKQP 391
Query: 214 DYVTI 218
+ +I
Sbjct: 392 GFSSI 396
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/480 (49%), Positives = 331/480 (68%), Gaps = 7/480 (1%)
Query: 21 PNQNLTTTPQISIQTNNS-KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRM--TLHGTN 77
P+ L P+ + ++ + + V WTS+I+R R G + AA M +
Sbjct: 7 PSLALRPPPRSTKESQRAPRHAPRDVVSWTSTIARAARQGDLHAAAASLCAMLSSPAAPA 66
Query: 78 PNHITFITLLSGCADFPSQCLF--LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMD 135
PN +T +T+LS CAD PS L L +H KL +++++ T L Y
Sbjct: 67 PNDVTLLTVLSACADSPSSPLARPLALTLHARALKLF--PSHLLLSTCLARFYLASRLPH 124
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
LA +FD M V+S T+N M+ G MR G +++A +FD MP D +SWTAL++GFVK G
Sbjct: 125 LALQLFDTMPVRSVVTYNTMVSGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGR 184
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
+EA++CFR M + VEPDYVT+I+V++ACA VG LG+G+W+HR VL+Q + NV+V N+
Sbjct: 185 HDEAIDCFRAMLLDSVEPDYVTLIAVVSACAEVGALGLGMWVHRLVLRQGLERNVRVANS 244
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
LID+Y+RCG ++ A QVF + KRT+VSWNS+IVG A NG EA+E F M+++GFKPD
Sbjct: 245 LIDMYARCGQVKLAAQVFHSIRKRTVVSWNSMIVGLAANGLCTEAIELFEEMRRQGFKPD 304
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V+ TG LTACSHAGL E GLRY+D+M Y ++ R+EHYGC+VDL RAGRL++A++VV
Sbjct: 305 AVTLTGVLTACSHAGLTEHGLRYYDLMTTEYGIAARMEHYGCVVDLLGRAGRLDEAMHVV 364
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
E MPM+PNEVVLG+LLA CR GD+ +AE+LM++L +LDPG D+NYVLL+N+YAAVGKWD
Sbjct: 365 ETMPMRPNEVVLGALLAGCRMHGDLDMAEQLMQHLFELDPGGDANYVLLSNIYAAVGKWD 424
Query: 436 GAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCG 495
GAGK+R MK RG++K+PG S +EI +HEF++ DRSH ++E I ML LL ++ + G
Sbjct: 425 GAGKVRSLMKARGVKKRPGHSIVEIDGDVHEFVSSDRSHPQAEEIGQMLGLLRHEMAMYG 484
>gi|125541284|gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/475 (50%), Positives = 334/475 (70%), Gaps = 7/475 (1%)
Query: 21 PNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNP-- 78
P+ L PQ + + WTS+I+R + G + AA + M P
Sbjct: 7 PSLALPQPPQNPTPKPRRRPPRD-VASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVP 65
Query: 79 NHITFITLLSGCADFPSQCLF--LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
N +T +T+LS CAD PS L L +H V KL +++++ T L+ Y L
Sbjct: 66 NDVTLLTVLSACADSPSSPLARRLALSVHARVLKLF--PSHLLLSTCLVRFYFASRLPHL 123
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A +FDAM V+S+ T+N +I G MR G + +A +FD MP D +SWTAL++G VK G
Sbjct: 124 ALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRH 183
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
+EA+ CFR M + GVEPDYVT+I+V++ACA VG LG+G+W+HR V++Q + NV++ N+L
Sbjct: 184 DEAINCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSL 243
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
ID+Y+RCG +E ARQVF M KRT+VSWNS+IVGFA NG +A+E+F +M++EGFKPD
Sbjct: 244 IDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDA 303
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
V+FTG LTACSH GL ++GLRY+D+M+ Y ++ R+EHYGC+VDL R+GRLE+A+ VV
Sbjct: 304 VTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGRLEEAMRVVT 363
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDG 436
MPM+PNEVVLG+LLA CR GD+ +AE+LM++L++LDPG D+NYVLL+N+YAAVGKWDG
Sbjct: 364 TMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWDG 423
Query: 437 AGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
AGK+R MK RG++K+PG S++EI +HEF++GDRSH ++E I ML LL ++
Sbjct: 424 AGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQMLGLLMHEM 478
>gi|46805412|dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215704291|dbj|BAG93131.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/475 (50%), Positives = 335/475 (70%), Gaps = 7/475 (1%)
Query: 21 PNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNP-- 78
P+ L PQ + + WTS+I+R + G + AA + M P
Sbjct: 41 PSLALPQPPQNPTPKPRRRPPRD-VASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVP 99
Query: 79 NHITFITLLSGCADFPSQCLF--LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
N +T +T+LS CAD PS L L +H V KL +++++ T L+ Y L
Sbjct: 100 NDVTLLTVLSACADSPSSPLARRLALSVHARVLKLF--PSHLLLSTCLVRFYFASRLPHL 157
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A +FDAM V+S+ T+N +I G MR G + +A +FD MP D +SWTAL++G VK G
Sbjct: 158 ALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRH 217
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
+EA++CFR M + GVEPDYVT+I+V++ACA VG LG+G+W+HR V++Q + NV++ N+L
Sbjct: 218 DEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSL 277
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
ID+Y+RCG +E ARQVF M KRT+VSWNS+IVGFA NG +A+E+F +M++EGFKPD
Sbjct: 278 IDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDA 337
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
V+FTG LTACSH GL ++GLRY+D+M+ Y ++ R+EHYGC+VDL R+G+LE+A+ VV
Sbjct: 338 VTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVVT 397
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDG 436
MPM+PNEVVLG+LLA CR GD+ +AE+LM++L++LDPG D+NYVLL+N+YAAVGKWDG
Sbjct: 398 TMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWDG 457
Query: 437 AGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
AGK+R MK RG++K+PG S++EI +HEF++GDRSH ++E I ML LL ++
Sbjct: 458 AGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQMLGLLMHEM 512
>gi|297599966|ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza sativa Japonica Group]
Length = 438
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 226/416 (54%), Positives = 314/416 (75%), Gaps = 4/416 (0%)
Query: 78 PNHITFITLLSGCADFPSQCLF--LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMD 135
PN +T +T+LS CAD PS L L +H V KL +++++ T L+ Y
Sbjct: 10 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKLF--PSHLLLSTCLVRFYFASRLPH 67
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
LA +FDAM V+S+ T+N +I G MR G + +A +FD MP D +SWTAL++G VK G
Sbjct: 68 LALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGR 127
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
+EA++CFR M + GVEPDYVT+I+V++ACA VG LG+G+W+HR V++Q + NV++ N+
Sbjct: 128 HDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANS 187
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
LID+Y+RCG +E ARQVF M KRT+VSWNS+IVGFA NG +A+E+F +M++EGFKPD
Sbjct: 188 LIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPD 247
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V+FTG LTACSH GL ++GLRY+D+M+ Y ++ R+EHYGC+VDL R+G+LE+A+ VV
Sbjct: 248 AVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVV 307
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
MPM+PNEVVLG+LLA CR GD+ +AE+LM++L++LDPG D+NYVLL+N+YAAVGKWD
Sbjct: 308 TTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWD 367
Query: 436 GAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
GAGK+R MK RG++K+PG S++EI +HEF++GDRSH ++E I ML LL ++
Sbjct: 368 GAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQMLGLLMHEM 423
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 129/267 (48%), Gaps = 42/267 (15%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I ++GR EA F M L G P+++T I ++S CA+ + L LG +H
Sbjct: 113 VSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGA--LGLGMWVH 170
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
LV + GL+R NV + +L+DMYA+ G+++LA VF MR ++ +WN+MI G+ G
Sbjct: 171 RLVVRQGLER-NVRIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRC 229
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
AV E F M+ G +PD VT VL AC
Sbjct: 230 ADAV-------------------------------EHFEAMRREGFKPDAVTFTGVLTAC 258
Query: 226 ANVGTLGIGLWIHRY--VLKQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRMHKR-T 280
++ G GL RY +++ ++ ++ + ++DL R G +E A +V M R
Sbjct: 259 SHGGLTDEGL---RYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVVTTMPMRPN 315
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSM 307
V +++ G ++G VG A + +
Sbjct: 316 EVVLGALLAGCRMHGDVGMAEQLMQHL 342
>gi|413924390|gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/454 (51%), Positives = 322/454 (70%), Gaps = 6/454 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRM--TLHGTNPNHITFITLLSGCADFPSQCLF--LG 101
V WTS+ISR R G + AA M + PN +T +T+LS CAD PS L L
Sbjct: 33 VSWTSTISRAARQGDLHAAAASLCAMVSSPAAPAPNDVTLLTVLSACADSPSSPLASPLA 92
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H KL +++++ T L Y LA +FD+M V+S T+N MI G MR
Sbjct: 93 LTLHARALKLF--PSHLLLSTCLARFYLASRLPHLALQLFDSMPVRSVVTYNTMISGLMR 150
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G +++A +FD MP D +SWTAL++GFVK G +EA++CFR M + GVE DY+T+++V
Sbjct: 151 NGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDGVETDYITLVAV 210
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
++ACA VG LG+G+W+HR VL+Q + NV+V N+LID+Y+RCG + A QVF+ + KRT+
Sbjct: 211 VSACAEVGALGLGMWVHRLVLRQRLERNVRVANSLIDMYARCGQVNLAAQVFRSIRKRTV 270
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSWNS+IVGFA NG +A+E F M+++GFKPD V+ TG LTACSHAGL E GLRY+D+
Sbjct: 271 VSWNSMIVGFAANGRCTDAIELFEEMRRQGFKPDAVTLTGVLTACSHAGLTEHGLRYYDL 330
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M Y V+ R+EHYGC+VDL RAGRL++A++VVE MPM+PNEVVLG+LLA CRT G++
Sbjct: 331 MTTEYGVAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLAGCRTHGNLD 390
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
+AE++M++L +LDP D+NYVLL+N+YAAVGKWDGAGK+R MK RG++K+PG S++EI
Sbjct: 391 MAEQMMQHLFELDPQGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKKRPGHSTVEID 450
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCG 495
+HEF++GD+SH + I ML LL ++ G
Sbjct: 451 GDVHEFVSGDQSHPLAGEIGQMLGLLWHEMTRYG 484
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 140/345 (40%), Gaps = 79/345 (22%)
Query: 178 RDAISWTALLNGFVKRGYFEEALECFREMQIS--GVEPDYVTIISVLNACANVGT----L 231
RD +SWT+ ++ ++G A M S P+ VT+++VL+ACA+ +
Sbjct: 30 RDVVSWTSTISRAARQGDLHAAAASLCAMVSSPAAPAPNDVTLLTVLSACADSPSSPLAS 89
Query: 232 GIGLWIHRYVLK--------------------------QDFKD----NVKVCNTLIDLYS 261
+ L +H LK Q F +V NT+I
Sbjct: 90 PLALTLHARALKLFPSHLLLSTCLARFYLASRLPHLALQLFDSMPVRSVVTYNTMISGLM 149
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
R G ++ A +VF M VSW ++I GF NG EA++ F +M +G + D ++
Sbjct: 150 RNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDGVETDYITLVA 209
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA---------------- 365
++AC+ G + G+ ++ + R+ + ++D+Y+R
Sbjct: 210 VVSACAEVGALGLGMWVHRLVLR-QRLERNVRVANSLIDMYARCGQVNLAAQVFRSIRKR 268
Query: 366 ---------------GRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLM 407
GR DA+ + E M KP+ V L +L AC G L E +
Sbjct: 269 TVVSWNSMIVGFAANGRCTDAIELFEEMRRQGFKPDAVTLTGVLTACSHAG---LTEHGL 325
Query: 408 KY--LVDLDPGVDS---NYVLLANMYAAVGKWDGAGKIRRTMKGR 447
+Y L+ + GV + +Y + ++ G+ D A + TM R
Sbjct: 326 RYYDLMTTEYGVAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMR 370
>gi|357143748|ref|XP_003573036.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Brachypodium distachyon]
Length = 484
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/479 (49%), Positives = 332/479 (69%), Gaps = 6/479 (1%)
Query: 20 NPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRI--AEAALEFTRMTLHGTN 77
P+ +L Q S + + V WTS+I+R R G + A AAL +
Sbjct: 6 TPSLSLPPPAQRSATSKPRRLPPRDVVSWTSAIARPAREGDLQGAAAALSAMLSSPAAPP 65
Query: 78 PNHITFITLLSGCADFPSQCLF--LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMD 135
PN +T +T+LS CA S L L +H L KL N+++ T L Y
Sbjct: 66 PNDVTLLTVLSACAGDSSSALARPLALSLHALAVKLF--PCNLLLCTCLARFYLASRLPH 123
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
LA +FD+M +S T+N MI G MR G + +A +FDEMP D +SWTAL++G VK G
Sbjct: 124 LAIKLFDSMPDRSVVTYNTMITGLMRNGLVAAAREVFDEMPAPDKVSWTALIDGCVKNGR 183
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
+EA++CF M GVEPDYVT+++ ++ACA VG LG+G+W+HR+V+ + + NV+V N+
Sbjct: 184 HDEAIDCFHSMLRDGVEPDYVTLVAAISACAEVGALGLGMWVHRFVVDKRLEHNVRVANS 243
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
LID+Y+RCG ++FARQVF R+ KRT+VSWNS+IVGFA NG +A+E+F +M++EGFKPD
Sbjct: 244 LIDMYARCGQVDFARQVFGRIRKRTVVSWNSMIVGFAANGQYADAVEHFEAMRREGFKPD 303
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V+FTG LTACSHAGL ++GLRY+D M+ + ++ R+EHYGC+VDL RAGRL +A+ VV
Sbjct: 304 TVTFTGVLTACSHAGLTDEGLRYYDAMRTEHGIAARMEHYGCVVDLLGRAGRLGEAMRVV 363
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
E+MPM+PNEVVLG+LLA CR GD+ LAE+LM++L++ DPG DSNYVLL+N+YAAVGKW
Sbjct: 364 ESMPMRPNEVVLGALLAGCRMHGDVDLAEQLMQHLLEQDPGGDSNYVLLSNIYAAVGKWG 423
Query: 436 GAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC 494
GAGK+R MK RG++K+PG S++EI +HEF+ GDRSH ++ ++ +L LL+ ++ C
Sbjct: 424 GAGKVRSLMKSRGVKKRPGQSTVEIDGEVHEFVCGDRSHPQAREVFEVLGLLTHEMAGC 482
>gi|326489701|dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 220/448 (49%), Positives = 316/448 (70%), Gaps = 2/448 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRM--TLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V WT++I+R R G + A + M + PN +T +T+LS CA PS L
Sbjct: 32 VSWTAAIARPAREGDLPATAAALSAMLSSPAAPAPNDVTLLTVLSACAGAPSSPLARPLA 91
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+ L +++++ T L Y LA +F +M V+S T+N MI G MR G
Sbjct: 92 LSLHALAAKLFPSHLLLCTCLARFYLASRLPHLALQLFGSMTVRSLVTYNTMITGLMRNG 151
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+ +A +FD MP D +SWTAL++G VK G +EA++CF M + GVEPDYVT+++ ++
Sbjct: 152 LVAAAREVFDGMPEPDKVSWTALIDGCVKNGRHDEAIDCFHAMLLDGVEPDYVTLVAAIS 211
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA VG LG+G+W+HR V ++ + N+++ N+LID+Y+RCG +EFARQVF M RT+VS
Sbjct: 212 ACAEVGALGLGMWVHRLVTRERLEGNIRIANSLIDMYARCGQVEFARQVFDSMRNRTVVS 271
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WNS+IVGFA NG +A+E+F +M+++GF+PD V+FTG LTACSHAGL ++GLRY+ M+
Sbjct: 272 WNSMIVGFAANGRCTDAIEHFEAMRRKGFRPDAVTFTGVLTACSHAGLTDEGLRYYKAMR 331
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ ++ R+EHYGC+VDL RAGRL +A++VV MPM+PNEVVLG+LLA CR GD+ +A
Sbjct: 332 AEHGITARMEHYGCVVDLLGRAGRLGEAMSVVATMPMRPNEVVLGALLAGCRMHGDVDMA 391
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E+LM++L++ DPG DSNYVLL+N+YAA GKWDGAGK+R MK RG++K+PG S++EI
Sbjct: 392 EQLMQHLLEQDPGGDSNYVLLSNIYAATGKWDGAGKVRGLMKARGVKKRPGRSAVEIDGD 451
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDL 491
+HEF+ GDRSH +++ ++ ML LLS ++
Sbjct: 452 VHEFVCGDRSHPQADEVFDMLGLLSHEM 479
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 37/236 (15%)
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQIS--GVEPDYVTIISVLNACANVGT------ 230
D +SWTA + + G M S P+ VT+++VL+ACA +
Sbjct: 30 DVVSWTAAIARPAREGDLPATAAALSAMLSSPAAPAPNDVTLLTVLSACAGAPSSPLARP 89
Query: 231 ----------------LGIGLWIHRYVLKQDFKD------------NVKVCNTLIDLYSR 262
L + + R+ L ++ NT+I R
Sbjct: 90 LALSLHALAAKLFPSHLLLCTCLARFYLASRLPHLALQLFGSMTVRSLVTYNTMITGLMR 149
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
G + AR+VF M + VSW ++I G NG EA++ F++M +G +PD V+ A
Sbjct: 150 NGLVAAAREVFDGMPEPDKVSWTALIDGCVKNGRHDEAIDCFHAMLLDGVEPDYVTLVAA 209
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
++AC+ G + G+ ++ + R+ I ++D+Y+R G++E A V ++M
Sbjct: 210 ISACAEVGALGLGMWVHRLVTR-ERLEGNIRIANSLIDMYARCGQVEFARQVFDSM 264
>gi|255565773|ref|XP_002523876.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536964|gb|EEF38602.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 384
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/364 (59%), Positives = 280/364 (76%), Gaps = 14/364 (3%)
Query: 1 MNSSATATILPQPF----------LPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTS 50
+ S++T T LPQ F P P +L P+ +++ ++S ++ T+ WTS
Sbjct: 6 LTSASTITQLPQRFNSKPTPTLTPAPPNLPPPSHLIQHPRTNLKHQCNRS-IDLTIAWTS 64
Query: 51 SISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCK 110
SISRHC +G++ EAA FT+M L PNHITF TL+S CADFP Q +G IH V K
Sbjct: 65 SISRHCCNGQLPEAASLFTQMRLAAVEPNHITFATLISFCADFPFQGKSIGPSIHAYVRK 124
Query: 111 LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR 170
LGLD NVMVGTAL+DMYAK G++ LA ++FD ++VK+S +WN MIDGYMR G+ SA+
Sbjct: 125 LGLDTCNVMVGTALVDMYAKCGKVQLARLIFDDLKVKNSVSWNTMIDGYMRNGETGSAME 184
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+FDEMP +DAISWT ++GF+K+G+FE+ALE FREMQ+S VEPDYVTII+VL+ACAN+G
Sbjct: 185 LFDEMPEKDAISWTVFIDGFIKKGHFEQALEWFREMQVSKVEPDYVTIIAVLSACANLGA 244
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
LG+GLWIHRYVL+++F++NV++ N+LID+YSRCGCIE ARQVF +M KRTLVSWNSIIVG
Sbjct: 245 LGLGLWIHRYVLEKEFRNNVRIGNSLIDMYSRCGCIELARQVFHKMLKRTLVSWNSIIVG 304
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY---R 347
FA NGF EALEYF MQKEGFKPDGVSFTGALTACSHAG++++GL+ FDIMK+ +
Sbjct: 305 FAANGFAEEALEYFGLMQKEGFKPDGVSFTGALTACSHAGMVDEGLKCFDIMKRHFTFNT 364
Query: 348 VSPR 351
V+P+
Sbjct: 365 VNPK 368
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 130/267 (48%), Gaps = 45/267 (16%)
Query: 181 ISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG--IGLWIH 238
I+WT+ ++ G EA F +M+++ VEP+++T ++++ CA+ G IG IH
Sbjct: 60 IAWTSSISRHCCNGQLPEAASLFTQMRLAAVEPNHITFATLISFCADFPFQGKSIGPSIH 119
Query: 239 RYVLKQDFKD-NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
YV K NV V L+D+Y++CG ++ AR +F + + VSWN++I G+ NG
Sbjct: 120 AYVRKLGLDTCNVMVGTALVDMYAKCGKVQLARLIFDDLKVKNSVSWNTMIDGYMRNGET 179
Query: 298 G-------------------------------EALEYFNSMQKEGFKPDGVSFTGALTAC 326
G +ALE+F MQ +PD V+ L+AC
Sbjct: 180 GSAMELFDEMPEKDAISWTVFIDGFIKKGHFEQALEWFREMQVSKVEPDYVTIIAVLSAC 239
Query: 327 SHAGLIEDGL---RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPN 383
++ G + GL RY +++K +R + RI + ++D+YSR G +E A V M +K
Sbjct: 240 ANLGALGLGLWIHRY--VLEKEFRNNVRIGN--SLIDMYSRCGCIELARQVFHKM-LKRT 294
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYL 410
V S++ G AE ++Y
Sbjct: 295 LVSWNSIIVGFAANG---FAEEALEYF 318
>gi|347954506|gb|AEP33753.1| chloroplast biogenesis 19, partial [Matthiola incana]
Length = 324
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/324 (65%), Positives = 259/324 (79%), Gaps = 1/324 (0%)
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
++NGFVK+G+ EEAL FREMQISGV+PDYV II+ LNAC N+G L GLW+HRYV+ QD
Sbjct: 1 MINGFVKKGFQEEALVWFREMQISGVKPDYVAIIAALNACTNLGXLSFGLWVHRYVMNQD 60
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
FK+NV+V N+ IDLY RCGC+EFAR+VF +M KRT+VSWNS+IVGFA NG E+L YF
Sbjct: 61 FKNNVRVSNSXIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFR 120
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
MQ++GFKPD V+FTGALTACSH G +E+GLRYF IMK YR+SPRIEHYG +VDLYSRA
Sbjct: 121 KMQEKGFKPDAVTFTGALTACSHVGXVEEGLRYFQIMKCDYRISPRIEHYGXLVDLYSRA 180
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKG-DIILAERLMKYLVDLDPGVDSNYVLL 424
GRLEDAL +V++MPMKPNEVV+GSLLAAC G + +LAERLMK+L DL+ SNYV+L
Sbjct: 181 GRLEDALKLVQSMPMKPNEVVIGSLLAACXNHGNNTVLAERLMKHLSDLNVKSHSNYVIL 240
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
+NMYAA GKW+GA K+RR MKG G++K+PG SSIEI H FMAGD +H+E+ +I +L
Sbjct: 241 SNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDHTHVFMAGDGAHVETVYIRDVL 300
Query: 485 ELLSFDLKLCGYVPETVAGELYEN 508
L+S D +L G E +A EL N
Sbjct: 301 LLISSDSRLEGCAVEALADELLHN 324
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 110/238 (46%), Gaps = 45/238 (18%)
Query: 57 RSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRN 116
+ G EA + F M + G P+++ I L+ C + L G +H V +N
Sbjct: 7 KKGFQEEALVWFREMQISGVKPDYVAIIAALNACTNLGX--LSFGLWVHRYVMNQDF-KN 63
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
NV V N+ ID Y R G +E A +FD+M
Sbjct: 64 NVRVS-------------------------------NSXIDLYCRCGCVEFAREVFDKME 92
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
R +SW +++ GF G E+L FR+MQ G +PD VT L AC++VG + GL
Sbjct: 93 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGXVEEGL- 151
Query: 237 IHRY--VLKQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
RY ++K D++ + ++ + L+DLYSR G +E A ++ Q M + N +++G
Sbjct: 152 --RYFQIMKCDYRISPRIEHYGXLVDLYSRAGRLEDALKLVQSMPMKP----NEVVIG 203
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/458 (42%), Positives = 286/458 (62%), Gaps = 2/458 (0%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
+ V W + IS H R GR E+ F M G P +T++++LS C ++ + LG
Sbjct: 85 DTPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGK-GTRDVLLGM 143
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+HG V G+ ++ V AL+DMYA+ M A VFD M+V+S +W +++ G R
Sbjct: 144 QVHGRVVGSGV-LPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARL 202
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G ++ A +FD MP RD +SWTA+++G+V F EALE FREMQ S V D T++SV+
Sbjct: 203 GQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVI 262
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
ACA +G L +G W+ Y+ +Q K + V N LID+YS+CG IE A VF+ MH R
Sbjct: 263 TACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKF 322
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+W +II+G AVNG+ EA+E F+ M + PD V+F G LTAC+HAGL++ G +F M
Sbjct: 323 TWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSM 382
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+ Y ++P + HYGCI+DL RAG++ +AL+ ++ MPM PN + G+LLAACR G+ +
Sbjct: 383 IEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEI 442
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
E + + L++LDP Y+LL+N+YA +W+ ++R + +GI+K+PG S IE+
Sbjct: 443 GELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDG 502
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IHEF+AGD+SH S+ IYS LE + DL GY P+
Sbjct: 503 IIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDV 540
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 11/224 (4%)
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANV----GTLGIGLWIHRYVLKQDFKDNVKV 252
E+A+ + M G PD T ++L A A G+ +H +V++ N V
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
++L+ Y+ G AR + T V+WN++I G G GE+ F M + G
Sbjct: 61 ASSLVAAYTAGGDGAAARALVGECD--TPVAWNALISGHNRGGRFGESCGSFVDMARAGA 118
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY--RVSPRIEHYGCIVDLYSRAGRLED 370
P V++ L+AC D L + ++ V P + +VD+Y+ +
Sbjct: 119 APTPVTYVSVLSACGKG--TRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGS 176
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
A V + M ++ + V SLL+ G + A L + + D
Sbjct: 177 AWKVFDGMQVR-SVVSWTSLLSGLARLGQVDEARDLFDRMPERD 219
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/462 (41%), Positives = 286/462 (61%), Gaps = 2/462 (0%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
S+ + V W + IS H R R EA F M G P +T++++LS C
Sbjct: 102 SERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDV 161
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L LG +HG V G+ ++ V AL+DMYA+ M+ A +FD M+V+S +W +++
Sbjct: 162 L-LGMQVHGRVVGSGV-LPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLS 219
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
G R G ++ A +F MP RD +SWTA+++G+V+ F EALE FREMQ S V D T
Sbjct: 220 GLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFT 279
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++SV+ ACA +G L +G W+ Y+ +Q K + V N LID+YS+CG IE A VF+ MH
Sbjct: 280 MVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMH 339
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
R +W +II+G AVNG+ EA+E F+ M PD V+F G LTAC+HAGL++ G
Sbjct: 340 HRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGRE 399
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
+F M++ Y ++P + HYGCI+DL+ RAG++ +AL+ ++ MPM PN + G+LLAACR
Sbjct: 400 FFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVH 459
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G+ + E + + L+ +DP + Y LL+N+YA +W+ ++R T+ +GI+K+PG S
Sbjct: 460 GNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSL 519
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
IE+ IHEF+AGD+SH S+ IY LE + DL GY P+
Sbjct: 520 IEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFPD 561
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 149/363 (41%), Gaps = 75/363 (20%)
Query: 52 ISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKL 111
I R C +A + RM G P+ TF LL A S +H V K
Sbjct: 15 IPRRCLVAAREDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRA--VHAHVVKF 72
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
G+ RN V T+L+ YA G A + + WNA+I
Sbjct: 73 GMGRN-AHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALI--------------- 116
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN-VGT 230
+G + F EA F +M +G P VT +SVL+AC G
Sbjct: 117 ----------------SGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGD 160
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
+ +G+ +H V+ +++V N L+D+Y+ C +E A ++F M R++VSW S++ G
Sbjct: 161 VLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSG 220
Query: 291 FA--------------------------VNGFVG-----EALEYFNSMQKEGFKPDGVSF 319
++G+V EALE F MQ D +
Sbjct: 221 LTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTM 280
Query: 320 TGALTACSHAGLIEDG--LRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVV 375
+TAC+ G +E G +R + + R +++ + ++D+YS+ G +E AL+V
Sbjct: 281 VSVITACAQLGALEMGEWVRVY-----MSRQGIKMDAFVGNALIDMYSKCGSIERALDVF 335
Query: 376 ENM 378
++M
Sbjct: 336 KDM 338
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 109/265 (41%), Gaps = 11/265 (4%)
Query: 186 LLNGFVKR---GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
LL G +R E+A+ + M G PD T +L A A + +H +V+
Sbjct: 11 LLEGIPRRCLVAAREDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVV 70
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
K N V +L+ Y+ G AR + + T V WN++I G GEA
Sbjct: 71 KFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACC 130
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY--RVSPRIEHYGCIVD 360
F M + G P V++ L+AC D L + ++ V P + +VD
Sbjct: 131 SFVDMARAGAAPTPVTYVSVLSACGKG--TGDVLLGMQVHGRVVGSGVLPDLRVENALVD 188
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
+Y+ +E A + + M ++ + V SLL+ G + A L + + D +
Sbjct: 189 MYAECADMESAWKLFDGMQVR-SVVSWTSLLSGLTRLGRVDEARDLFGRMPERD---TVS 244
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMK 445
+ + + Y ++ A ++ R M+
Sbjct: 245 WTAMIDGYVQAARFREALEMFREMQ 269
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/454 (42%), Positives = 285/454 (62%), Gaps = 3/454 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + IS H RSGR + F M +T++++LS C + L LG +H
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACG--KGKDLLLGMQVH 184
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + G+ + V AL+DMYA+ G MD A V+F+ M+++S +W ++I G +R G +
Sbjct: 185 KRVLESGVLPDQ-RVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQV 243
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A +FD MP RD I+WTA+++G+V+ G F +ALE FR MQI V D T++SV+ AC
Sbjct: 244 DRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTAC 303
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A +G L G W Y+ + K +V V N LID+YS+CG IE A VF+ MH R +W
Sbjct: 304 AQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWT 363
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+II+G AVNG EA++ F M + PD V+F G LTAC+HAGL++ G +F M +
Sbjct: 364 AIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEA 423
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y +SP + HYGC++D+ RAG+L++AL+ ++ MPMKPN + G+LLA+CR G+ + E
Sbjct: 424 YNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGEL 483
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ L++LDP + Y+LL+NMYA +W +IR+ + +GI+K+PG S IE+ IH
Sbjct: 484 AAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIH 543
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
EF+A DRSH ++ IYS LE + DL+ GYVP+
Sbjct: 544 EFVAADRSHPMNKEIYSKLENVLTDLRNAGYVPD 577
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 105/256 (41%), Gaps = 42/256 (16%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T+ WT+ I + + GR +A F M + + T +++++ CA + L G
Sbjct: 258 TIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGA--LETGEWA 315
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ +LG+ + +V VG AL+DMY+K G ++ A VF M + FTW A+I G G
Sbjct: 316 RIYMGRLGI-KMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGR 374
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
E A+ MF M R +Q PD VT + VL A
Sbjct: 375 GEEAIDMFYRM---------------------------LRALQT----PDEVTFVGVLTA 403
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVC----NTLIDLYSRCGCIEFARQVFQRM-HKR 279
C + G + G + L N+ LID+ R G ++ A +M K
Sbjct: 404 CTHAGLVDKG---REFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKP 460
Query: 280 TLVSWNSIIVGFAVNG 295
W +++ V G
Sbjct: 461 NSTIWGTLLASCRVYG 476
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 22/292 (7%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN- 223
+ A + D +P R + ++ ++G EEA+ + M G PD T S+L
Sbjct: 5 LSRARSLLDGIPHRRGRAASSSVSGHGA----EEAVAGYVRMLAGGARPDAYTFPSLLKA 60
Query: 224 ----ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
A V +G IH +V+K + N ++LI +Y+ G AR V +
Sbjct: 61 AAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLA 120
Query: 280 T----LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
T V WN++I G +G + F M + V++ L+AC G +D
Sbjct: 121 TGGGAPVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSAC---GKGKDL 177
Query: 336 LRYFDIMKKIYR--VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
L + K++ V P +VD+Y+ G ++ A + E M M+ + S+++
Sbjct: 178 LLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMR-SMASWTSVISG 236
Query: 394 CRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
G + A L ++ + D + + + Y VG++ A + R M+
Sbjct: 237 LVRSGQVDRARDLFDHMPERDT---IAWTAMIDGYVQVGRFRDALETFRYMQ 285
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/456 (41%), Positives = 292/456 (64%), Gaps = 3/456 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W S + +A + F R+ + P+ T ++L C + L G ++
Sbjct: 93 TFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLD--LSNGRIL 150
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG+V K+G R+N+ + ++ +YA G M A ++F+ M + TWN MI +++GD
Sbjct: 151 HGVVEKVGF-RSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGD 209
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
E A +F MP R+ SWT+++ G+V+ G +EA+ F +M+ +GV+ + VT+++VL A
Sbjct: 210 HEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAA 269
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L +G+ IH Y + FK NV++ NTLID+Y +CGC+E A +VF+ M +RT+VSW
Sbjct: 270 CADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSW 329
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+++I G A++G EAL F+ M + G +P+GV+F G L ACSH GLI +G R+F M +
Sbjct: 330 SAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTR 389
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P+IEHYGC+VDL SRAG L +A + NMPMKPN VV G+LL ACR ++ +AE
Sbjct: 390 DYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAE 449
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+K+L++LDP D YV+L+N+YA G+W+ ++R+ MK R ++K PG SSI + +
Sbjct: 450 EAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVV 509
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF+AG+ SH ++E I+ E L +++L GYVP T
Sbjct: 510 HEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNT 545
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/456 (41%), Positives = 292/456 (64%), Gaps = 3/456 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W S + +A + F R+ + P+ T ++L C + L G ++
Sbjct: 93 TFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLD--LSNGRIL 150
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG+V K+G R+N+ + ++ +YA G M A ++F+ M + TWN MI +++GD
Sbjct: 151 HGVVEKVGF-RSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGD 209
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
E A +F MP R+ SWT+++ G+V+ G +EA+ F +M+ +GV+ + VT+++VL A
Sbjct: 210 HEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAA 269
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L +G+ IH Y + FK NV++ NTLID+Y +CGC+E A +VF+ M +RT+VSW
Sbjct: 270 CADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSW 329
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+++I G A++G EAL F+ M + G +P+GV+F G L ACSH GLI +G R+F M +
Sbjct: 330 SAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTR 389
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P+IEHYGC+VDL SRAG L +A + NMPMKPN VV G+LL ACR ++ +AE
Sbjct: 390 DYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAE 449
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+K+L++LDP D YV+L+N+YA G+W+ ++R+ MK R ++K PG SSI + +
Sbjct: 450 EAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVV 509
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF+AG+ SH ++E I+ E L +++L GYVP T
Sbjct: 510 HEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNT 545
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/455 (40%), Positives = 295/455 (64%), Gaps = 9/455 (1%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTL---HGTNP---NHITFITLLSGCAD 92
K +P +++ R + ++ A+ + L HG NP + TF ++ CA
Sbjct: 70 KRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAG 129
Query: 93 FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTW 152
C LG +HG V K G ++N +V +L++MY K +D A VF+ M + + +W
Sbjct: 130 L--MCYDLGKQVHGHVFKFG-QKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSW 186
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N +I G++R G + A +F+EM + SWTA+++G+ + G + +ALE FR MQ+ G+E
Sbjct: 187 NTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIE 246
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD ++++SVL ACA +G L +G WIH Y K F N+ VCN LI++Y++CG I+ R++
Sbjct: 247 PDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRL 306
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F +M++R ++SW+++IVG A +G EA+E F MQK +P+ ++F G L+AC+HAGL+
Sbjct: 307 FDQMNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLL 366
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
+GLRYF+ MK+ Y + P +EHYGC+V+L +GRL+ AL +++ MPMKP+ + GSLL+
Sbjct: 367 NEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLS 426
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
+CR+ ++ +A M++L++L+P NYVLL+N+YA +GKWDG ++R+ M+ + ++K
Sbjct: 427 SCRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKT 486
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
PG SSIE+ + + EF +GD S S+ IY +L+LL
Sbjct: 487 PGCSSIEVDNMVQEFASGDDSKPFSKAIYRVLKLL 521
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 156/377 (41%), Gaps = 87/377 (23%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+SSF M+D + E A +F + +A + A++ + + A+ +++M
Sbjct: 44 QSSFLVTKMVDVCNHHAETEYANLLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQM 103
Query: 207 Q-----ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
+ + PD T V+ +CA + +G +H +V K K N V N+L+++Y
Sbjct: 104 LGHSHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYV 163
Query: 262 RC-------------------------------GCIEFARQVFQRMHKRTLVSWNSIIVG 290
+C G + AR +F+ M +T+ SW +I+ G
Sbjct: 164 KCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSG 223
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE----------------- 333
+A G +ALE+F MQ G +PD +S L AC+ G +E
Sbjct: 224 YARIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRN 283
Query: 334 ------------------DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
+G R FD M + +S + ++ + GR +A+ +
Sbjct: 284 ICVCNALIEMYAKCGSIDEGRRLFDQMNERDVIS-----WSTMIVGLANHGRAHEAIELF 338
Query: 376 ENM---PMKPNEVVLGSLLAACRTKGDIILAERL-----MKYLVDLDPGVDSNYVLLANM 427
+ M ++PN + LL+AC G +L E L MK +++PGV+ +Y L N+
Sbjct: 339 QEMQKAKIEPNIITFVGLLSACAHAG--LLNEGLRYFESMKRDYNIEPGVE-HYGCLVNL 395
Query: 428 YAAVGKWDGAGKIRRTM 444
G+ D A ++ + M
Sbjct: 396 LGLSGRLDQALELIKKM 412
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 121/287 (42%), Gaps = 43/287 (14%)
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
R ++I +E +V I L C N+ L IH +++K + + ++D+ +
Sbjct: 5 LRALKIREMEDIFVPI---LKNCPNIVELK---KIHAHIVKFSLSQSSFLVTKMVDVCNH 58
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ-----KEGFKPDGV 317
E+A +F+R+ +N++I + N A+ + M + PD
Sbjct: 59 HAETEYANLLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKF 118
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKIY--------RVSPRIEHYGCIVDLYSRAGRLE 369
+F + +C+ GL +D+ K+++ + + +E+ +V++Y + L+
Sbjct: 119 TFPFVVKSCA-------GLMCYDLGKQVHGHVFKFGQKSNTVVEN--SLVEMYVKCDSLD 169
Query: 370 DALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYA 429
DA V E M + + V +L++ G + A + + + D ++ + + YA
Sbjct: 170 DAHKVFEEMTER-DAVSWNTLISGHVRLGQMRRARAIFEEMQD---KTIFSWTAIVSGYA 225
Query: 430 AVGKWDGAGKIRRTMKGRGIQKK-----------PGLSSIEIGSGIH 465
+G + A + R M+ GI+ L ++E+G IH
Sbjct: 226 RIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIH 272
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/454 (41%), Positives = 285/454 (62%), Gaps = 3/454 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + IS H RS + + F M G P +T+IT+LS C + ++LG +H
Sbjct: 89 VVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGK--DKYIWLGMQVH 146
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V G+ ++ VG AL+DMYA+ MD A +F+ M V+++ +W ++I G++R G +
Sbjct: 147 KCVVASGV-LPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQV 205
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A +FD MP RD +SWTA+++G+V+ G F EALE FREMQ S V D T++SV+ AC
Sbjct: 206 DQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTAC 265
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A +G L G W Y+ + K + V N L+D+YS+CG I+ A VF+ M+ R +W
Sbjct: 266 AQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWT 325
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I+G AVNG EA+ F M + PD V+F G LTAC+HAGL++ G +F M
Sbjct: 326 AVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGS 385
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y ++P + H+GC++DL RAG+L++AL + NMPM+PN + G+LLAACR G+ + +
Sbjct: 386 YGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQL 445
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
++L++LD Y+LL+N+YA +W+ ++R+ + +GI+K+PG S IE+ IH
Sbjct: 446 AAEHLLELDTENGMVYILLSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIEMNGTIH 505
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
EF+AGDRSH S+ IYS L+ + DLK GYVP+
Sbjct: 506 EFIAGDRSHPMSKEIYSKLDKVLTDLKDAGYVPD 539
>gi|222623741|gb|EEE57873.1| hypothetical protein OsJ_08529 [Oryza sativa Japonica Group]
Length = 500
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/445 (44%), Positives = 281/445 (63%), Gaps = 28/445 (6%)
Query: 21 PNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNP-- 78
P+ L PQ + + WTS+I+R + G + AA + M P
Sbjct: 41 PSLALPQPPQNPTPKPRRRPPRD-VASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVP 99
Query: 79 NHITFITLLSGCADFPSQCLF--LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
N +T +T+LS CAD PS L L +H V KL +++++ T L+ Y L
Sbjct: 100 NDVTLLTVLSACADSPSSPLARRLALSVHARVLKL--FPSHLLLSTCLVRFYFASRLPHL 157
Query: 137 ATVVFDAMRVKSSFTWNAMIDG-YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
A +FDAM V+S+ T+N +I G + G + +A +FD MP D +SWTAL++G VK G
Sbjct: 158 ALQLFDAMPVRSAVTYNTVISGPHAGTGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGR 217
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
+EA++CFR G GL + + NV++ N+
Sbjct: 218 HDEAIDCFRRHA--------------------SGRCRAGLRHADSRHLRGLERNVRIANS 257
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
LID+Y+RCG +E ARQVF M KRT+VSWNS+IVGFA NG +A+E+F +M++EGFKPD
Sbjct: 258 LIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPD 317
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V+FTG LTACSH GL ++GLRY+D+M+ Y ++ R+EHYGC+VDL R+G+LE+A+ VV
Sbjct: 318 AVTFTGVLTACSHGGLTDEGLRYYDLMRPNYGIAARMEHYGCVVDLLGRSGQLEEAMRVV 377
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
MPM+PNEVVLG+ A CR GD+ +AE+LM++L++LDPG D+NYVLL+N+YAAVGKWD
Sbjct: 378 TTMPMRPNEVVLGAFFAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWD 437
Query: 436 GAGKIRRTMKGRGIQKKPGLSSIEI 460
GAGK+R MK RG++K+PG S++EI
Sbjct: 438 GAGKVRSLMKARGLRKRPGYSAVEI 462
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/456 (39%), Positives = 285/456 (62%), Gaps = 3/456 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W +S + R + ++ + F M G +PN +T + +LS C+ L G I
Sbjct: 173 VVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKD--LEGGKHI 230
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ + G+ N+++ L+DM+A G MD A VFD M+ + +W +++ G+ G
Sbjct: 231 YKYI-NGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQ 289
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A + FD++P RD +SWTA+++G+++ F EAL FREMQ+S V+PD T++S+L A
Sbjct: 290 IDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTA 349
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L +G W+ Y+ K K++ V N LID+Y +CG + A++VF+ MH + +W
Sbjct: 350 CAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTW 409
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++IVG A+NG EAL F++M + PD +++ G L AC+HAG++E G +F M
Sbjct: 410 TAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTM 469
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ + P + HYGC+VDL RAGRLE+A V+ NMP+KPN +V GSLL ACR ++ LAE
Sbjct: 470 QHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAE 529
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
K +++L+P + YVLL N+YAA +W+ ++R+ M RGI+K PG S +E+ +
Sbjct: 530 MAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNV 589
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+EF+AGD+SH +S+ IY+ LE + DL GY P+T
Sbjct: 590 YEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPDT 625
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 155/367 (42%), Gaps = 70/367 (19%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I + R + M P+ TF LL G + L G ++
Sbjct: 75 WNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTR--NMALQYGKVLLNH 132
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
K G D +N+ V A + M++ +DLA VFD TWN M+ GY R
Sbjct: 133 AVKHGFD-SNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNR------ 185
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
VK+ F+++ F EM+ GV P+ VT++ +L+AC+
Sbjct: 186 -----------------------VKQ--FKKSKMLFIEMEKRGVSPNSVTLVLMLSACSK 220
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ L G I++Y+ + N+ + N LID+++ CG ++ A+ VF M R ++SW SI
Sbjct: 221 LKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSI 280
Query: 288 IVGFA--------------------------VNGFVG-----EALEYFNSMQKEGFKPDG 316
+ GFA ++G++ EAL F MQ KPD
Sbjct: 281 VTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDE 340
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNV 374
+ LTAC+H G +E G + I + S + + + ++D+Y + G + A V
Sbjct: 341 FTMVSILTACAHLGALELGEW---VKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKV 397
Query: 375 VENMPMK 381
+ M K
Sbjct: 398 FKEMHHK 404
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 139/338 (41%), Gaps = 51/338 (15%)
Query: 84 ITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA-KFGRMDLATVVFD 142
I+LL C + ++ IH K+GL + + + A + G+M A VFD
Sbjct: 11 ISLLEKC-----KSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFD 65
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
A+ + F WN MI GY R ++ V M+ LL
Sbjct: 66 AIPQPTLFIWNTMIKGYSRINHPQNGVSMY-------------LL--------------- 97
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
M S ++PD T +L L G + + +K F N+ V I ++S
Sbjct: 98 ---MLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSL 154
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
C ++ AR+VF +V+WN ++ G+ ++ F M+K G P+ V+
Sbjct: 155 CRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLM 214
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYR------VSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
L+ACS +E G K IY+ V + ++D+++ G +++A +V +
Sbjct: 215 LSACSKLKDLEGG-------KHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFD 267
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
NM + + + S++ G I LA + + + D
Sbjct: 268 NMKNR-DVISWTSIVTGFANIGQIDLARKYFDQIPERD 304
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/462 (40%), Positives = 283/462 (61%), Gaps = 3/462 (0%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S+ V W IS + RS + E+ F M P+ IT +++LS C+ L
Sbjct: 179 RSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKD--L 236
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
+G +H V L ++ V+ AL+DMYA G MD A +FD M+ + +W A++ G
Sbjct: 237 NVGKRVHRYVKDLKIEPVRVL-ENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTG 295
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+ G + A FD+MP RD +SWTA+++G+++ F+E L FREMQ + ++PD T+
Sbjct: 296 FTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTM 355
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+S+L ACA++G L +G WI Y+ K + K + V N LID+Y CG +E A ++F M
Sbjct: 356 VSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPH 415
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R +SW ++I G A+NG+ EAL+ F+ M K PD V+ G L AC+H+G+++ G ++
Sbjct: 416 RDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKF 475
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M + + P + HYGC+VDL RAG L++A V++NMP+KPN +V GSLL ACR
Sbjct: 476 FARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHR 535
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
D +AE + +++L+P + YVLL N+YAA +W+ ++R+ M RGI+K PG S I
Sbjct: 536 DEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLI 595
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
E+ +HEF+AGD+ H +S+ IYS L+ +S DLK GY P+T
Sbjct: 596 EMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDT 637
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 161/370 (43%), Gaps = 76/370 (20%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSG-CADFPSQCLFLGAMIHG 106
W + I + R G A + M G P+ T+ LL D +C G +H
Sbjct: 87 WNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKC---GRELHD 143
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
+ KLG +NV V AL+ +Y+ G + +A VFD TWN MI GY R +
Sbjct: 144 HIVKLGFS-SNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFD 202
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
++++FDEM E R V P +T++SVL+AC+
Sbjct: 203 ESMKLFDEM-------------------------ERMR------VLPSSITLVSVLSACS 231
Query: 227 NVGTLGIGLWIHRYVLKQDFK-DNVKVC-NTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
+ L +G +HRYV +D K + V+V N LID+Y+ CG ++ A +F M R ++SW
Sbjct: 232 KLKDLNVGKRVHRYV--KDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISW 289
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGF-------------------------------K 313
+I+ GF G VG A YF+ M + F K
Sbjct: 290 TAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIK 349
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDA 371
PD + LTAC+H G +E G I I + +I+ + ++D+Y G +E A
Sbjct: 350 PDEFTMVSILTACAHLGALELGEW---IKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKA 406
Query: 372 LNVVENMPMK 381
+ + MP +
Sbjct: 407 IRIFNAMPHR 416
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 155/360 (43%), Gaps = 49/360 (13%)
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
+ G M+ A +VFD M + F WN MI GY R G SAV M+ EM R +
Sbjct: 65 ELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPF 124
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
+KR + A++C RE+ H +++K F N
Sbjct: 125 LLKRFTRDTAVKCGREL-------------------------------HDHIVKLGFSSN 153
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
V V N LI LYS G + AR VF R K +V+WN +I G+ + E+++ F+ M++
Sbjct: 154 VFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMER 213
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
P ++ L+ACS + G R +K + ++ P ++D+Y+ G ++
Sbjct: 214 MRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDL-KIEPVRVLENALIDMYAACGDMD 272
Query: 370 DALNVVENMPMKPNEVVLGSLLAACRTK-GDIILAERLMKYLVDLDPGVDSNYVLLANMY 428
AL + +N MK +V+ + + T G + LA + + D ++ + + Y
Sbjct: 273 TALGIFDN--MKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERD---FVSWTAMIDGY 327
Query: 429 AAVGKWDGAGKIRRTMKGRGIQKK-----------PGLSSIEIGSGIHEFMAGDRSHIES 477
V ++ + R M+ I+ L ++E+G I ++ + I+S
Sbjct: 328 LQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDS 387
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/449 (41%), Positives = 281/449 (62%), Gaps = 10/449 (2%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLF 99
T +V W IS + R R +A F M G P+ T ++ LS C + L
Sbjct: 259 TTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKN--LE 316
Query: 100 LGAMIHGLVCK-LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
LG IH V K LG + ALLDMYAK G +++A +FD M +K+ W +MI G
Sbjct: 317 LGDEIHNYVRKELGF---TTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISG 373
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y+ GD+ A +FD+ PVRD + WTA++NG+V+ +F++A+ FREMQI ++PD T+
Sbjct: 374 YINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTV 433
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+++L CA +G L G WIH Y+ + +V V LI++YS+CGC++ + ++F +
Sbjct: 434 VTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELED 493
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ SW SII G A+NG EAL F+ M++ G KPD ++F G L+ACSH GL+E+G R+
Sbjct: 494 KDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRF 553
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL---GSLLAACR 395
F+ MKK++R+ P++EHYGC++DL RAG L++A +++ +P++ E+V+ G+LL+ACR
Sbjct: 554 FNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACR 613
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
++ + ERL K L +++ S + LLAN+YA+V +W+ A K+RR MK G++K PG
Sbjct: 614 IHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGC 673
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSML 484
S IE+ +HEF+ GD SH E I SML
Sbjct: 674 SLIEVDGIVHEFLVGDPSHPEMIEICSML 702
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 199/457 (43%), Gaps = 110/457 (24%)
Query: 55 HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLS--GCADFPSQCLFLGAMIHGLVCKLG 112
+ + G + + L F ++ G P+ T+ +L GC Q G + G + K G
Sbjct: 172 YAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQ----GEKVRGFIVKTG 227
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
+D +N + +N++ID Y ++E+A ++F
Sbjct: 228 MDLDN--------------------------------YVYNSLIDMYYELSNVENAKKLF 255
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE-PDYVTIISVLNACANVGTL 231
DEM RD++SW +++G+V+ FE+A+ FREMQ G E PD T++S L+AC + L
Sbjct: 256 DEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNL 315
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
+G IH YV +++ ++ N L+D+Y++CGC+ AR +F M + ++ W S+I G+
Sbjct: 316 ELGDEIHNYV-RKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGY 374
Query: 292 --------------------------AVNGFV-----GEALEYFNSMQKEGFKPDGVSFT 320
+NG+V +A+ F MQ + KPD +
Sbjct: 375 INCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVV 434
Query: 321 GALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV------ 374
LT C+ G +E G ++ R++ + ++++YS+ G ++ +L +
Sbjct: 435 TLLTGCAQLGALEQG-KWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELED 493
Query: 375 ----------------------------VENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+E + KP+++ +L+AC G + R
Sbjct: 494 KDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRF 553
Query: 407 ---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKI 440
MK + ++P V+ +Y + ++ G D A ++
Sbjct: 554 FNSMKKVHRIEPKVE-HYGCVIDLLGRAGLLDEAEEL 589
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 167/355 (47%), Gaps = 30/355 (8%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G++ A ++F+ + + ++ + KRG + L F++++ G+ PD T VL
Sbjct: 145 GNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVL 204
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
A + + G + +++K + V N+LID+Y +E A+++F M R V
Sbjct: 205 KAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSV 264
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
SWN +I G+ +A+ F MQ+EG KPD + L+AC+ +E G +
Sbjct: 265 SWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY 324
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
++K + RI++ ++D+Y++ G L A N+ + M MK N + S+++ GD+
Sbjct: 325 VRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMSMK-NVICWTSMISGYINCGDL- 380
Query: 402 LAERLMKYLVDLDPGVDSN-YVLLANMYAAVGKWDGAGKIRRTMKGRGIQK-KPG----- 454
R + L D P D + + N Y +D A + R M+ IQK KP
Sbjct: 381 ---REARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQ---IQKIKPDKFTVV 434
Query: 455 --------LSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
L ++E G IH ++ +R ++ +++E+ S CG V +++
Sbjct: 435 TLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYS----KCGCVDKSL 485
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 43/243 (17%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
KS V V WT+ I+ + + +A F M + P+ T +TLL+GCA + L
Sbjct: 389 KSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGA--L 446
Query: 99 FLGAMIHGLVCKLGLDRN----NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNA 154
G IHG LD N +V+VGTAL++MY+K G +D + +F + K + +W +
Sbjct: 447 EQGKWIHGY-----LDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTS 501
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+I G G A+R+F EM+ G +PD
Sbjct: 502 IICGLAMNGKTSEALRLFS-------------------------------EMERVGAKPD 530
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
+T I VL+AC++ G + G + K + V+ +IDL R G ++ A ++
Sbjct: 531 DITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELI 590
Query: 274 QRM 276
Q +
Sbjct: 591 QEI 593
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/449 (41%), Positives = 281/449 (62%), Gaps = 10/449 (2%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLF 99
T +V W IS + R R +A F M G P+ T ++ LS C + L
Sbjct: 305 TTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKN--LE 362
Query: 100 LGAMIHGLVCK-LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
LG IH V K LG + ALLDMYAK G +++A +FD M +K+ W +MI G
Sbjct: 363 LGDEIHNYVRKELGF---TTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISG 419
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y+ GD+ A +FD+ PVRD + WTA++NG+V+ +F++A+ FREMQI V+PD T+
Sbjct: 420 YINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTV 479
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+++L CA +G L G WIH Y+ + +V V LI++YS+CGC++ + ++F +
Sbjct: 480 VTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELED 539
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ SW SII G A+NG EAL F+ M++ G KPD ++F G L+ACSH GL+E+G R+
Sbjct: 540 KDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRF 599
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL---GSLLAACR 395
F+ MKK++R+ P++EHYGC++DL RAG L++A +++ +P++ E+V+ G+LL+ACR
Sbjct: 600 FNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACR 659
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
++ + ERL K L +++ S + LLAN+YA+V +W+ A K+RR MK G++K PG
Sbjct: 660 IHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGC 719
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSML 484
S IE+ +HEF+ GD SH E I SML
Sbjct: 720 SLIEVDGIVHEFLVGDPSHPEMMEICSML 748
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 127/547 (23%), Positives = 236/547 (43%), Gaps = 125/547 (22%)
Query: 4 SATATILPQPFLPHQQNPNQNLTTTPQ-ISIQTNNSKSTVNPTVQWTSSISRHCRS-GRI 61
S ++ +LP + Q +++ +++P + + SK T ++ R+C+S ++
Sbjct: 104 SQSSHMLPLSIIRRVQFISRHFSSSPHLVPVLLRISKLTKKSCIECL----RNCKSMDQL 159
Query: 62 AEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG 121
+ + R+ L G + T L++ CAD L I V L NVMV
Sbjct: 160 KQIQSQIFRIGLEG---DRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMV- 215
Query: 122 TALLDMYAKFGRMDLATVVFDAMR----------------------------------VK 147
MYAK G + ++F +R VK
Sbjct: 216 ----KMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVK 271
Query: 148 S-----SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
+ ++ +N++ID Y ++E+A ++FDEM RD++SW +++G+V+ FE+A+
Sbjct: 272 TGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINT 331
Query: 203 FREMQISGVE-PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
FREMQ G E PD T++S L+AC + L +G IH YV +++ ++ N L+D+Y+
Sbjct: 332 FREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDMYA 390
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGF--------------------------AVNG 295
+CGC+ AR +F M + ++ W S+I G+ +NG
Sbjct: 391 KCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMING 450
Query: 296 FV-----GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
+V +A+ F MQ + KPD + LT C+ G +E G ++ R++
Sbjct: 451 YVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQG-KWIHGYLDENRITM 509
Query: 351 RIEHYGCIVDLYSRAGRLEDALNV----------------------------------VE 376
+ ++++YS+ G ++ +L + +E
Sbjct: 510 DVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEME 569
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGK 433
+ KP+++ +L+AC G + R MK + ++P V+ +Y + ++ G
Sbjct: 570 RVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVE-HYGCVIDLLGRAGL 628
Query: 434 WDGAGKI 440
D A ++
Sbjct: 629 LDEAEEL 635
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 167/355 (47%), Gaps = 30/355 (8%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G++ A ++F+ + + ++ + KRG + L F++++ G+ PD T VL
Sbjct: 191 GNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVL 250
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
A + + G + +++K + V N+LID+Y +E A+++F M R V
Sbjct: 251 KAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSV 310
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
SWN +I G+ +A+ F MQ+EG KPD + L+AC+ +E G +
Sbjct: 311 SWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY 370
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
++K + RI++ ++D+Y++ G L A N+ + M MK N + S+++ GD+
Sbjct: 371 VRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMSMK-NVICWTSMISGYINCGDL- 426
Query: 402 LAERLMKYLVDLDPGVDSN-YVLLANMYAAVGKWDGAGKIRRTMKGRGIQK-KPG----- 454
R + L D P D + + N Y +D A + R M+ IQ+ KP
Sbjct: 427 ---REARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQ---IQRVKPDKFTVV 480
Query: 455 --------LSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
L ++E G IH ++ +R ++ +++E+ S CG V +++
Sbjct: 481 TLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYS----KCGCVDKSL 531
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/473 (38%), Positives = 289/473 (61%), Gaps = 13/473 (2%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTN----------PNHITFITLLS 88
K ++P +++ R C + ++F + L P+ TF ++
Sbjct: 44 KEVIDPNAYLYNAMIRACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVK 103
Query: 89 GCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS 148
CA L G +H K G +++++ AL+DMY K + A +FD M +
Sbjct: 104 ACARLGLHNL--GKQVHAQFFKFG-KKSHLITENALIDMYTKCDNLLDAHNLFDEMHERG 160
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
+ +WN +I G++R G + A +FDEMP R +SWTA+++G+ + G + +AL+ FREMQI
Sbjct: 161 AISWNGIISGHVRLGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQI 220
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
+G+EPD +IISVL ACA +G L G WIH + + +CN LI++Y++CGCI+
Sbjct: 221 AGIEPDEASIISVLPACAKLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQ 280
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
A Q+F +M R ++SW+++I G A +G V EA+ F M++ KP+G++F G L+AC+H
Sbjct: 281 ACQLFDQMRGRDVISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAH 340
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
AG E+GL YFD MKK + + P IEHYG +VDL RAGRL AL++VE MPMKP+ + G
Sbjct: 341 AGFWEEGLMYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWG 400
Query: 389 SLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
SLL++CRT +I +A M++L +L+P NYVLL+N+YA +GKWD ++R+ ++ +
Sbjct: 401 SLLSSCRTHCNIEVAVIAMEHLEELEPDDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKR 460
Query: 449 IQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
++K PG S IE+ + EF++GD S S+ I+ +LELL+F + ++ E +
Sbjct: 461 MKKTPGCSLIEVNNVAQEFVSGDDSKPYSKEIFWLLELLAFHQDMDKHILEII 513
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 154/374 (41%), Gaps = 77/374 (20%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG-------YFEEA 199
+S+F MID R D++ A +F E+ +A + A++ ++++
Sbjct: 18 QSNFLVTKMIDVCDRNEDMDYASFLFKEVIDPNAYLYNAMIRACTHNSMYSLTIDFYKQM 77
Query: 200 LECFREMQISG--VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
L +R Q S + PD T V+ ACA +G +G +H K K ++ N LI
Sbjct: 78 LREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHAQFFKFGKKSHLITENALI 137
Query: 258 DLYSRC-------------------------------GCIEFARQVFQRMHKRTLVSWNS 286
D+Y++C G + AR +F M RT+VSW +
Sbjct: 138 DMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQMRRARALFDEMPNRTIVSWTA 197
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG--LRYF----D 340
II G+ G +AL+ F MQ G +PD S L AC+ G +E G + F
Sbjct: 198 IISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKLGALETGKWIHMFCARNG 257
Query: 341 IMKKIYRVSPRIEHY---GCI---VDLYSRA------------------GRLEDALNVVE 376
++++ + IE Y GCI L+ + G++ +A+ + E
Sbjct: 258 LLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMIGGLANHGKVREAIAIFE 317
Query: 377 NMP---MKPNEVVLGSLLAACRTKG---DIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
M +KPN + LL+AC G + ++ MK ++P ++ +Y L ++
Sbjct: 318 RMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIE-HYGSLVDLLGR 376
Query: 431 VGKWDGAGKIRRTM 444
G+ A I M
Sbjct: 377 AGRLSQALDIVEKM 390
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 37/258 (14%)
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
H V+K + + +ID+ R +++A +F+ + +N++I N
Sbjct: 8 HALVIKYALSQSNFLVTKMIDVCDRNEDMDYASFLFKEVIDPNAYLYNAMIRACTHNSMY 67
Query: 298 GEALEYFNSMQKEG---------FKPDGVSFTGALTACSHAGLIEDG----LRYFDIMKK 344
++++ M +E PD +F + AC+ GL G ++F KK
Sbjct: 68 SLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHAQFFKFGKK 127
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ ++ ++D+Y++ L DA N+ + M + G++ G + L +
Sbjct: 128 SHLITE-----NALIDMYTKCDNLLDAHNLFDEMHER------GAISWNGIISGHVRLGQ 176
Query: 405 -RLMKYLVDLDPG-VDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPG-------- 454
R + L D P ++ + + Y +G + A + R M+ GI+
Sbjct: 177 MRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPA 236
Query: 455 ---LSSIEIGSGIHEFMA 469
L ++E G IH F A
Sbjct: 237 CAKLGALETGKWIHMFCA 254
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/455 (40%), Positives = 291/455 (63%), Gaps = 9/455 (1%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTL---HGTNP---NHITFITLLSGCAD 92
K +P +++ R + ++ A+ + L HG NP + TF ++ CA
Sbjct: 70 KGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAG 129
Query: 93 FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTW 152
C LG +HG V K G ++N +V +L++MY K +D A VF+ M + + +W
Sbjct: 130 L--MCYDLGKQVHGHVFKFG-QKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSW 186
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N +I G++R G + A +F+EM + SWTA+++G+ + G + +ALE FR MQ+ G+E
Sbjct: 187 NTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIE 246
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD ++++SVL CA +G L +G WIH Y K F N+ VCN LI++Y++CG I+ R++
Sbjct: 247 PDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRL 306
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F +M +R ++SW+++IVG A +G EA+E F MQK +P ++F G LTAC+HAGL+
Sbjct: 307 FDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLL 366
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
+GLRYF+ MK+ Y + P +EHYGC+V+L +GRL+ AL +V+ MP KP+ + GSLL+
Sbjct: 367 NEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLS 426
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
+CR+ G++ +A M++L++L+P NYVLL+N+YA +GKWDG ++R+ M+ + ++K
Sbjct: 427 SCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKT 486
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
PG SSIE+ + + EF +GD S S+ I +L+LL
Sbjct: 487 PGCSSIEVDNMVQEFASGDDSKPFSKAICRVLKLL 521
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 155/377 (41%), Gaps = 87/377 (23%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+SSF M+D G+ E A +F + +A + A++ + + A+ +++M
Sbjct: 44 QSSFLVTKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQM 103
Query: 207 -----QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
+ + PD T V+ +CA + +G +H +V K K N V N+L+++Y
Sbjct: 104 LGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYV 163
Query: 262 RC-------------------------------GCIEFARQVFQRMHKRTLVSWNSIIVG 290
+C G + AR +F+ M +T+ SW +I+ G
Sbjct: 164 KCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSG 223
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE----------------- 333
+A G +ALE+F MQ G +PD +S L C+ G +E
Sbjct: 224 YARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRN 283
Query: 334 ------------------DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
G R FD MK+ +S + ++ + GR +A+ +
Sbjct: 284 ICVCNALIEMYAKCGSIDQGRRLFDQMKERDVIS-----WSTMIVGLANHGRAREAIELF 338
Query: 376 ENM---PMKPNEVVLGSLLAACRTKGDIILAERL-----MKYLVDLDPGVDSNYVLLANM 427
+ M ++P+ + LL AC G +L E L MK +++PGV+ +Y L N+
Sbjct: 339 QEMQKAKIEPSIITFVGLLTACAHAG--LLNEGLRYFESMKRDYNIEPGVE-HYGCLVNL 395
Query: 428 YAAVGKWDGAGKIRRTM 444
G+ D A ++ + M
Sbjct: 396 LGLSGRLDQALELVKKM 412
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 121/287 (42%), Gaps = 43/287 (14%)
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
R ++I +E +V I L C N+ L IH +++K + + ++D+ +
Sbjct: 5 LRALKIREMEDMFVPI---LKDCPNIVELK---KIHAHIVKFSLSQSSFLVTKMVDVCNH 58
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM-----QKEGFKPDGV 317
G E+A +F+ + +N++I + N A+ + M + PD
Sbjct: 59 YGETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKF 118
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKIY--------RVSPRIEHYGCIVDLYSRAGRLE 369
+F + +C+ GL +D+ K+++ + + +E+ +V++Y + L+
Sbjct: 119 TFPFVVKSCA-------GLMCYDLGKQVHGHVFKFGQKSNTVVEN--SLVEMYVKCDSLD 169
Query: 370 DALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYA 429
DA V E M + + V +L++ G + A + + + D ++ + + YA
Sbjct: 170 DAHRVFEEMTER-DAVSWNTLISGHVRLGQMRRARAIFEEMQD---KTIFSWTAIVSGYA 225
Query: 430 AVGKWDGAGKIRRTMKGRGIQKK-----------PGLSSIEIGSGIH 465
+G + A + R M+ GI+ L ++E+G IH
Sbjct: 226 RIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIH 272
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/454 (40%), Positives = 284/454 (62%), Gaps = 3/454 (0%)
Query: 47 QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
W + + A+A F R+ +P+H T +L C+ + G ++HG
Sbjct: 80 HWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLD--VRNGKIVHG 137
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
V KLGL ++N+ + ++ +YA G + +A VFD M + TWN MI ++ GD E
Sbjct: 138 YVEKLGL-QSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAE 196
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A ++F EMP R+ SWT+++ G+ + G +EA++ F EM+ +G+ P+ VT+++VL ACA
Sbjct: 197 GAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACA 256
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
++G L +G IH + + ++ N++VCNTLID+Y +CGC+E A ++F M +RT+VSW++
Sbjct: 257 DMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSA 316
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I G A +G +AL FN M G KP+ V+F G L ACSH G++E G +YF M + Y
Sbjct: 317 MIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDY 376
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+ PRIEHYGC+VDL+SRAG L++A + NMP+ PN VV G+LL C+ +I LAE
Sbjct: 377 GIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEA 436
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHE 466
++L LDP D YV+L+N+YA G+W+ ++R+ M+ RG++K PG SSI + ++
Sbjct: 437 TRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYN 496
Query: 467 FMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F+AGD +H ++E I+ E L +KL GYVP T
Sbjct: 497 FVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNT 530
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 34/240 (14%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+F + + W L F + +A+ F ++ + PD+ T VL AC+ +
Sbjct: 69 IFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLD 128
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN----- 285
+ G +H YV K + N+ + N ++ LY+ CG I AR+VF +M +R +++WN
Sbjct: 129 VRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIAR 188
Query: 286 --------------------------SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
S+I G+A G EA++ F M+ G P+ V+
Sbjct: 189 LVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTV 248
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKI-YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
L AC+ G + G R D + Y + R+ ++D+Y + G LEDA + +NM
Sbjct: 249 VAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRV--CNTLIDMYVKCGCLEDACRIFDNM 306
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 70/184 (38%), Gaps = 35/184 (19%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I+ GR +A F +M G PN +TFI +L C+
Sbjct: 311 VVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHM----------- 359
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
G+V K GR A++ D V + M+D + R G
Sbjct: 360 -GMVEK---------------------GRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGL 397
Query: 165 IESAVRMFDEMPVR-DAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVL 222
++ A MP+ + + W ALL G + A E R + ++ + Y ++S +
Sbjct: 398 LQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNI 457
Query: 223 NACA 226
A A
Sbjct: 458 YAEA 461
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 7/183 (3%)
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
+A+ +FQ + + WN+ + FA +A+ F +++ PD + + L ACS
Sbjct: 65 YAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACS 124
Query: 328 HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
+ +G ++K+ + + IV LY+ G + A V + MP + +V+
Sbjct: 125 RLLDVRNGKIVHGYVEKL-GLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQR--DVIT 181
Query: 388 GSLLAACRTK-GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKG 446
+++ A K GD AE K ++ ++ + YA GK A + M+
Sbjct: 182 WNIMIARLVKMGD---AEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMED 238
Query: 447 RGI 449
G+
Sbjct: 239 AGL 241
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/462 (41%), Positives = 286/462 (61%), Gaps = 10/462 (2%)
Query: 41 TVNPTVQ-WTSSISRHCRSGRIAEAALEF-TRMTLHGTNPNHITFITLLSGCADFPSQCL 98
T NP+V WT+ I H G + E AL F +M G PN TF ++L C P
Sbjct: 88 TQNPSVFFWTAIIHGHALRG-LHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEP---- 142
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G +H KLG D +++ V T LLD+YA+ G + A +FD M KS + AM+
Sbjct: 143 --GKALHSQAVKLGFD-SDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTC 199
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + G++++A +FD M RD + W +++G+ + G EAL FR M + +P+ VT+
Sbjct: 200 YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTV 259
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+SVL+AC +G L G W+H Y+ + NV V L+D+YS+CG +E AR VF ++
Sbjct: 260 LSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD 319
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +V+WNS+IVG+A++GF EAL+ F SM + G P ++F G L+AC H+G + +G
Sbjct: 320 KDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDI 379
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F+ MK Y + P+IEHYGC+V+L RAG +E A +V+NM ++P+ V+ G+LL ACR G
Sbjct: 380 FNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG 439
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
I L E++++ LVD + Y+LL+N+YAAVG WDG ++R MK G++K+PG SSI
Sbjct: 440 KIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSI 499
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
E+ + +HEF+AG +H + + IY MLE ++ LK GY P+T
Sbjct: 500 EVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQT 541
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 128/309 (41%), Gaps = 68/309 (22%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH ++ + GLD + ++ L YA GR+D + +F + S F W A+I G+ R
Sbjct: 49 IHAVLFRHGLDHHPIL-NFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALR- 106
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
G E+AL + +M GVEP+ T S+L
Sbjct: 107 ------------------------------GLHEQALNFYAQMLTQGVEPNAFTFSSILK 136
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
C + G +H +K F ++ V L+D+Y+R G + A+Q+F M +++LVS
Sbjct: 137 LCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVS 192
Query: 284 -------------------------------WNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
WN +I G+ NG EAL F M K
Sbjct: 193 LTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKA 252
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
KP+ V+ L+AC G +E G R+ + + + +VD+YS+ G LEDA
Sbjct: 253 KPNEVTVLSVLSACGQLGALESG-RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDAR 311
Query: 373 NVVENMPMK 381
V + + K
Sbjct: 312 LVFDKIDDK 320
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/456 (39%), Positives = 289/456 (63%), Gaps = 7/456 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W IS + + G+ E+ F M P +T + +LS C+ L G +H
Sbjct: 206 ITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKD--LRTGKKVH 263
Query: 106 GLV--CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
V CK+ +N+++ A++DMYA G MD A +F +M + +W ++ G+ G
Sbjct: 264 SYVKNCKV---ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLG 320
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+I+ A FD+MP +D +SWTA+++G+++ F+EALE FR MQ + V+PD T++SVL
Sbjct: 321 EIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLT 380
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA++G L +G WI Y+ + K+++ V N LID+Y +CG ++ A +F+ M +R +
Sbjct: 381 ACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT 440
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W ++IVG AVNG +AL+ F++M K PD +++ G L+AC+H GL++ G +YF M
Sbjct: 441 WTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMT 500
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ + P I HYGC+VDL +RAGRL++A V+ENMP+K N +V G+LLA CR + +A
Sbjct: 501 SQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMA 560
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E ++K +++L+P + YVLL N+YAA +W+ ++R+ M +GI+K PG S IE+
Sbjct: 561 EMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGR 620
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+HEF+AGDRSH ++++I + L+ ++ DLKL GY P+
Sbjct: 621 VHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPD 656
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 183/446 (41%), Gaps = 106/446 (23%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ M G P+ TF L G L G +HG V K GL + NV V TAL+ M
Sbjct: 127 YLEMLRRGVKPDRYTFPFLFKGFTR--DIALEYGRQLHGHVLKHGL-QYNVFVHTALVQM 183
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y G++D A VFD TWN +I Y + G
Sbjct: 184 YLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGK----------------------- 220
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
FEE+ F M+ V P VT++ VL+AC+ + L G +H YV +
Sbjct: 221 --------FEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVE 272
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA--------------- 292
N+ + N +ID+Y+ CG ++ A +F+ M+ R ++SW +I+ GF
Sbjct: 273 SNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKM 332
Query: 293 -----------VNGFV-----GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG- 335
++G++ EALE F +MQ KPD + LTAC+H G +E G
Sbjct: 333 PEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGE 392
Query: 336 -LR---------------------YF-----DIMKKIYRVSPRIEHYGCIVDLYSRA--G 366
+R YF D + I+R + + + + A G
Sbjct: 393 WIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNG 452
Query: 367 RLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP--GVDSN- 420
E AL++ NM + P+E+ +L+AC G L ++ KY + + G++ N
Sbjct: 453 HGEKALDMFSNMLKASILPDEITYIGVLSACTHTG---LVDKGRKYFLRMTSQHGIEPNI 509
Query: 421 --YVLLANMYAAVGKWDGAGKIRRTM 444
Y L ++ A G+ A ++ M
Sbjct: 510 AHYGCLVDLLARAGRLKEAYEVIENM 535
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 161/363 (44%), Gaps = 28/363 (7%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD + A R+FDE+P + W ++ G+ + + + + + EM GV+PD T +
Sbjct: 87 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 146
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
L G +H +VLK + NV V L+ +Y CG ++ AR VF K ++
Sbjct: 147 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 206
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+WN II + G E+ F M+ + P V+ L+ACS + G + +
Sbjct: 207 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 266
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
K +V + ++D+Y+ G ++ AL + +M + + + ++++ G+I +
Sbjct: 267 KNC-KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR-DIISWTTIVSGFTNLGEIDV 324
Query: 403 AERLMKYLVDLDPGVDSNYVLLANM---YAAVGKWDGAGKIRRTMKGRGIQKK------- 452
A D + +YV M Y ++ A ++ R M+ ++
Sbjct: 325 ARNY------FDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSV 378
Query: 453 ----PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV--PETVAGELY 506
L ++E+G I ++ DR+ I+++ ++ L+ K CG V E++ E+
Sbjct: 379 LTACAHLGALELGEWIRTYI--DRNKIKND-LFVRNALIDMYFK-CGDVDKAESIFREMS 434
Query: 507 END 509
+ D
Sbjct: 435 QRD 437
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/456 (39%), Positives = 289/456 (63%), Gaps = 7/456 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W IS + + G+ E+ F M P +T + +LS C+ L G +H
Sbjct: 185 ITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKD--LRTGKKVH 242
Query: 106 GLV--CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
V CK+ +N+++ A++DMYA G MD A +F +M + +W ++ G+ G
Sbjct: 243 SYVKNCKV---ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLG 299
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+I+ A FD+MP +D +SWTA+++G+++ F+EALE FR MQ + V+PD T++SVL
Sbjct: 300 EIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLT 359
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA++G L +G WI Y+ + K+++ V N LID+Y +CG ++ A +F+ M +R +
Sbjct: 360 ACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT 419
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W ++IVG AVNG +AL+ F++M K PD +++ G L+AC+H GL++ G +YF M
Sbjct: 420 WTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMT 479
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ + P I HYGC+VDL +RAGRL++A V+ENMP+K N +V G+LLA CR + +A
Sbjct: 480 SQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMA 539
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E ++K +++L+P + YVLL N+YAA +W+ ++R+ M +GI+K PG S IE+
Sbjct: 540 EMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGR 599
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+HEF+AGDRSH ++++I + L+ ++ DLKL GY P+
Sbjct: 600 VHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPD 635
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 183/446 (41%), Gaps = 106/446 (23%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ M G P+ TF L G L G +HG V K GL + NV V TAL+ M
Sbjct: 106 YLEMLRRGVKPDRYTFPFLFKGFTR--DIALEYGRQLHGHVLKHGL-QYNVFVHTALVQM 162
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y G++D A VFD TWN +I Y + G
Sbjct: 163 YLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGK----------------------- 199
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
FEE+ F M+ V P VT++ VL+AC+ + L G +H YV +
Sbjct: 200 --------FEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVE 251
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA--------------- 292
N+ + N +ID+Y+ CG ++ A +F+ M+ R ++SW +I+ GF
Sbjct: 252 SNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKM 311
Query: 293 -----------VNGFV-----GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG- 335
++G++ EALE F +MQ KPD + LTAC+H G +E G
Sbjct: 312 PEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGE 371
Query: 336 -LR---------------------YF-----DIMKKIYRVSPRIEHYGCIVDLYSRA--G 366
+R YF D + I+R + + + + A G
Sbjct: 372 WIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNG 431
Query: 367 RLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP--GVDSN- 420
E AL++ NM + P+E+ +L+AC G L ++ KY + + G++ N
Sbjct: 432 HGEKALDMFSNMLKASILPDEITYIGVLSACTHTG---LVDKGRKYFLRMTSQHGIEPNI 488
Query: 421 --YVLLANMYAAVGKWDGAGKIRRTM 444
Y L ++ A G+ A ++ M
Sbjct: 489 AHYGCLVDLLARAGRLKEAYEVIENM 514
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 162/360 (45%), Gaps = 22/360 (6%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD + A R+FDE+P + W ++ G+ + + + + + EM GV+PD T +
Sbjct: 66 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 125
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
L G +H +VLK + NV V L+ +Y CG ++ AR VF K ++
Sbjct: 126 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 185
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+WN II + G E+ F M+ + P V+ L+ACS + G + +
Sbjct: 186 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 245
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
K +V + ++D+Y+ G ++ AL + +M + + + ++++ G+I +
Sbjct: 246 KNC-KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR-DIISWTTIVSGFTNLGEIDV 303
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK---------- 452
A + + D ++ + + Y ++ A ++ R M+ ++
Sbjct: 304 ARNYFDKMPEKDY---VSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTA 360
Query: 453 -PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV--PETVAGELYEND 509
L ++E+G I ++ DR+ I+++ ++ L+ K CG V E++ E+ + D
Sbjct: 361 CAHLGALELGEWIRTYI--DRNKIKND-LFVRNALIDMYFK-CGDVDKAESIFREMSQRD 416
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/462 (41%), Positives = 285/462 (61%), Gaps = 10/462 (2%)
Query: 41 TVNPTVQ-WTSSISRHCRSGRIAEAALEF-TRMTLHGTNPNHITFITLLSGCADFPSQCL 98
T NP+V WT+ I H G + E AL F +M G PN TF ++L C P
Sbjct: 35 TQNPSVFFWTAIIHGHALRG-LHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEP---- 89
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G +H KLG D +++ V T LLD+YA+ G + A +FD M KS + AM+
Sbjct: 90 --GKALHSQAVKLGFD-SDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTC 146
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + G++++A +FD M RD + W +++G+ + G EAL FR M + +P+ VT+
Sbjct: 147 YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTV 206
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+SVL+AC +G L G W+H Y+ + NV V L+D+YS+CG +E AR VF ++
Sbjct: 207 LSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD 266
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +V+WNS+IVG+A+ GF EAL+ F SM + G P ++F G L+AC H+G + +G
Sbjct: 267 KDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDI 326
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F+ MK Y + P+IEHYGC+V+L RAG +E A +V+NM ++P+ V+ G+LL ACR G
Sbjct: 327 FNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG 386
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
I L E++++ LVD + Y+LL+N+YAAVG WDG ++R MK G++K+PG SSI
Sbjct: 387 KIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSI 446
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
E+ + +HEF+AG +H + + IY MLE ++ LK GY P+T
Sbjct: 447 EVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQT 488
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 36/254 (14%)
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y G ++ +V +F WTA+++G RG E+AL + +M GVEP+ T
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
S+L C + G +H +K F ++ V L+D+Y+R G + A+Q+F M +
Sbjct: 79 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134
Query: 279 RTLVS-------------------------------WNSIIVGFAVNGFVGEALEYFNSM 307
++LVS WN +I G+ NG EAL F M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
K KP+ V+ L+AC G +E G R+ + + + +VD+YS+ G
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESG-RWVHSYIENNGIQFNVHVGTALVDMYSKCGS 253
Query: 368 LEDALNVVENMPMK 381
LEDA V + + K
Sbjct: 254 LEDARLVFDKIDDK 267
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 284/449 (63%), Gaps = 5/449 (1%)
Query: 43 NPTV-QWTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFL 100
NP V + + I + + + A F +M T +P+ TF ++ CA C L
Sbjct: 67 NPNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGL--LCRRL 124
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +H VCK G + + + AL+DMY K G M A V++ M + + +WN++I G++
Sbjct: 125 GQQVHAHVCKFG-PKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHV 183
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R G ++SA +FDEMP R +SWT ++NG+ + G + +AL FREMQ+ G+EPD +++IS
Sbjct: 184 RLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVIS 243
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VL ACA +G L +G WIH+Y K F N V N L+++Y++CGCI+ A +F +M ++
Sbjct: 244 VLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKD 303
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
++SW+++I G A +G A+ F MQK G P+GV+F G L+AC+HAGL +GLRYFD
Sbjct: 304 VISWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLRYFD 363
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+M+ Y + P+IEHYGC+VDL R+G++E AL+ + MPM+P+ SLL++CR ++
Sbjct: 364 VMRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSSCRIHHNL 423
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+A M+ L+ L+P NYVLLAN+YA + KW+G +R+ ++ + I+K PG S IE+
Sbjct: 424 EIAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKTPGCSLIEV 483
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSF 489
+ + EF++GD S S+ ++ +L+ L+
Sbjct: 484 NNLVQEFVSGDDSKPFSQEVFWILKGLTL 512
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 80/336 (23%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
F+T L C IH + KL L ++N +V T +LD+ +D AT++F
Sbjct: 10 FVTTLRNCPKIAEL-----KKIHAHIVKLSLSQSNFLV-TKMLDLCDNLSHVDYATMIFQ 63
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
+ + F++NA+I Y A+ +F++M + S
Sbjct: 64 QLENPNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSAS-------------------- 103
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
PD T V+ +CA + +G +H +V K K + N LID+Y++
Sbjct: 104 ----------PDKFTFPFVIKSCAGLLCRRLGQQVHAHVCKFGPKTHAITENALIDMYTK 153
Query: 263 C-------------------------------GCIEFARQVFQRMHKRTLVSWNSIIVGF 291
C G ++ AR+VF M RT+VSW ++I G+
Sbjct: 154 CGDMSGAYQVYEEMTERDAVSWNSLISGHVRLGQMKSAREVFDEMPCRTIVSWTTMINGY 213
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR 351
A G +AL F MQ G +PD +S L AC+ G +E G K I++ S +
Sbjct: 214 ARGGCYADALGIFREMQVVGIEPDEISVISVLPACAQLGALEVG-------KWIHKYSEK 266
Query: 352 IEH------YGCIVDLYSRAGRLEDALNVVENMPMK 381
+ +V++Y++ G +++A + M K
Sbjct: 267 SGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEK 302
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 119/284 (41%), Gaps = 73/284 (25%)
Query: 41 TVNPTVQWTSSISRHCRSGRI-------------------------------AEAALEFT 69
T V W S IS H R G++ A+A F
Sbjct: 168 TERDAVSWNSLISGHVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFR 227
Query: 70 RMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA 129
M + G P+ I+ I++L CA + L +G IH K G + N V AL++MYA
Sbjct: 228 EMQVVGIEPDEISVISVLPACAQLGA--LEVGKWIHKYSEKSGFLK-NAGVFNALVEMYA 284
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
K G +D A +F+ M K +W+ MI G G +A+R+F+
Sbjct: 285 KCGCIDEAWGLFNQMIEKDVISWSTMIGGLANHGKGYAAIRVFE---------------- 328
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRY--VLKQDF- 246
+MQ +GV P+ VT + VL+ACA+ G GL RY V++ D+
Sbjct: 329 ---------------DMQKAGVTPNGVTFVGVLSACAHAGLWNEGL---RYFDVMRVDYH 370
Query: 247 -KDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVSWNSII 288
+ ++ L+DL R G +E A +M + +WNS++
Sbjct: 371 LEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLL 414
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 111/263 (42%), Gaps = 24/263 (9%)
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
++ L C + L IH +++K + + ++DL +++A +FQ++
Sbjct: 11 VTTLRNCPKIAELKK---IHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATMIFQQLEN 67
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+ S+N+II + N A+ FN M + PD +F + +C AGL+ L
Sbjct: 68 PNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSC--AGLLCRRLG 125
Query: 338 YFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
+ + + P+ ++D+Y++ G + A V E M + + V SL++
Sbjct: 126 Q-QVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTER-DAVSWNSLISGHV 183
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK--- 452
G + A + ++ ++ + N YA G + A I R M+ GI+
Sbjct: 184 RLGQMKSAREVFD---EMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEIS 240
Query: 453 --------PGLSSIEIGSGIHEF 467
L ++E+G IH++
Sbjct: 241 VISVLPACAQLGALEVGKWIHKY 263
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/411 (42%), Positives = 267/411 (64%), Gaps = 3/411 (0%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ TF ++ C+ C LG +H +CK G ++N+ + AL+DMY K + A
Sbjct: 117 PDRFTFPFVIKSCSGL--VCYNLGKQVHAHLCKFG-PKSNITMENALIDMYTKCASLLDA 173
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
VFD M + + +WN++I G++ G + A +FD MP R +SWTA+++G+ + G +
Sbjct: 174 HKVFDGMVERDAISWNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYA 233
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
+AL FR+MQI GVEPD ++IISVL ACA +G L +G WIH Y + +CN L+
Sbjct: 234 DALYVFRQMQIVGVEPDEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALM 293
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
++YS+CGCI A Q+F +M K ++SW+++I G A +G EA+E F M+K +P+G+
Sbjct: 294 EMYSKCGCIGQAYQLFDQMSKGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGI 353
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
+F G L+AC+HAG +GL YFD M K Y + P +EHYGC+VD+ RAGRL AL+V+E
Sbjct: 354 TFLGLLSACAHAGFWNEGLAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEK 413
Query: 378 MPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGA 437
MPMKP+ + GSLL++CRT ++ +A M++L +L+P NYVLL+N+YA + KWDG
Sbjct: 414 MPMKPDSKIWGSLLSSCRTHSNLDIAIIAMEHLEELEPDDTGNYVLLSNIYADLAKWDGV 473
Query: 438 GKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
++R+ +K + ++K PG S I+I + + EF++ D S S I+ +LELL+
Sbjct: 474 SRMRKLIKSKSMKKTPGSSLIDINNVVQEFVSWDDSKPFSRDIFWLLELLT 524
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 151/381 (39%), Gaps = 96/381 (25%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
F+ +L C + IH V K L +++ +V T ++D+ K + A+++F
Sbjct: 17 FVPILQNCKNIVEL-----KSIHAHVIKYSLSQSSFLV-TKMVDVCDKTEDLGYASLLFK 70
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM-PVRDAISWTALLNGFVKRGYFEEALE 201
++ + + +NAMI + A+ + EM ++D S +
Sbjct: 71 QVKEPNGYLYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIF-------------- 116
Query: 202 CFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
PD T V+ +C+ + +G +H ++ K K N+ + N LID+Y+
Sbjct: 117 -----------PDRFTFPFVIKSCSGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMYT 165
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFA--------------------------VNG 295
+C + A +VF M +R +SWNSII G ++G
Sbjct: 166 KCASLLDAHKVFDGMVERDAISWNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISG 225
Query: 296 FV-----GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL---RYFD---IMKK 344
+ +AL F MQ G +PD +S L AC+ G +E G Y D +++K
Sbjct: 226 YTRLGSYADALYVFRQMQIVGVEPDEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRK 285
Query: 345 IYRVSPRIEHY---GCIVDLY---------------------SRAGRLEDALNVVENM-- 378
+ +E Y GCI Y + G+ +A+ + + M
Sbjct: 286 TSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWSTMIGGLANHGKAREAIELFKRMKK 345
Query: 379 -PMKPNEVVLGSLLAACRTKG 398
++PN + LL+AC G
Sbjct: 346 AKIEPNGITFLGLLSACAHAG 366
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/462 (39%), Positives = 284/462 (61%), Gaps = 11/462 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W+ I +C+SG +A L F M + P+ + T+LS C + L G MI
Sbjct: 188 VVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGN--LSYGKMI 245
Query: 105 HGLVCKLGLDRNNVMVG----TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
H + + NN++V +AL+ MYA G MDLA +F+ M K+ AM+ GY
Sbjct: 246 HDFIME-----NNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYS 300
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G IE+A +F++M +D + W+A+++G+ + +EAL F EMQ G++PD VT++S
Sbjct: 301 KLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLS 360
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
V+ ACA++G L WIH +V K F + + N LI++Y++CG +E AR++F +M ++
Sbjct: 361 VITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKN 420
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
++SW +I FA++G G AL +F+ M+ E +P+G++F G L ACSHAGL+E+G + F
Sbjct: 421 VISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFY 480
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + ++P+ HYGC+VDL+ RA L +AL +VE MP+ PN ++ GSL+AACR G+I
Sbjct: 481 SMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEI 540
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E K L++LDP D +V L+N+YA +W+ G++R+ MK +GI K+ G S E+
Sbjct: 541 ELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFEL 600
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
+ IHEF+ DRSH ++ IY L + LKL GY P T +
Sbjct: 601 NNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCS 642
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 171/387 (44%), Gaps = 67/387 (17%)
Query: 57 RSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRN 116
RS + L + RM G + +F LL + S L G IHGL KLG D +
Sbjct: 99 RSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKS--LVEGLEIHGLAAKLGFD-S 155
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
+ V T L+ MYA GR I A MFD+M
Sbjct: 156 DPFVQTGLVRMYAACGR-------------------------------IAEARLMFDKMF 184
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
RD ++W+ +++G+ + G F +AL F EM+ VEPD + + +VL+AC G L G
Sbjct: 185 HRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKM 244
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGC------------------------------- 265
IH ++++ + + + + L+ +Y+ CG
Sbjct: 245 IHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQ 304
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
IE AR VF +M K+ LV W+++I G+A + EAL FN MQ G KPD V+ +TA
Sbjct: 305 IENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITA 364
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
C+H G + D ++ + + ++++Y++ G LE A + + MP K N +
Sbjct: 365 CAHLGAL-DQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRK-NVI 422
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVD 412
+++A GD A R + D
Sbjct: 423 SWTCMISAFAMHGDAGSALRFFHQMED 449
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/423 (42%), Positives = 271/423 (64%), Gaps = 3/423 (0%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ TF LL C++ PS L LG IH V KLG + V V L+ MYA G ++ A
Sbjct: 134 PDVHTFPLLLKACSEIPS--LRLGEAIHSHVFKLGWS-SEVSVSNFLVQMYASCGLIESA 190
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
+VFD +WN MI GY++ G +SA RMF+ MP RD +SW+ ++NG+V+ F+
Sbjct: 191 GLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFK 250
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
E L F++M +EP+ +++ L+ACA++G + G WI RY+ +++ + V++ LI
Sbjct: 251 EGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALI 310
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
D+YS+CG +E A +VF +M ++ +++W+++I G A+NG +AL F+ M+ +G KP+ V
Sbjct: 311 DMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEV 370
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
+F G L ACSH+ L+++G +F M IY + P H+ C+VDLY RAG L+ A V+++
Sbjct: 371 TFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKS 430
Query: 378 MPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGA 437
MP KPN + G+LL ACR GD L E++ K L++LDP YVLL+N+YAA G+WD
Sbjct: 431 MPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRV 490
Query: 438 GKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV 497
++RR M+ R + K PG S I++G IHEF+AGD SH + E IY+ L +S +LK GY
Sbjct: 491 AELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYK 550
Query: 498 PET 500
P+T
Sbjct: 551 PDT 553
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 110/256 (42%), Gaps = 44/256 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W+ I+ + + R E F M PN + LS CA LGAM
Sbjct: 234 VSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAH-------LGAMEQ 286
Query: 106 GLVCKLGLDRNN----VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
G + ++R N V +GTAL+DMY+K G ++ A VF M+ K+ W+AMI+G
Sbjct: 287 GQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMING--- 343
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G ++AL F +M++ GV+P+ VT I +
Sbjct: 344 ----------------------------LAINGQGKDALNLFSQMEMQGVKPNEVTFIGI 375
Query: 222 LNACANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKR 279
LNAC++ + G + H K N ++DLY R G ++ A+ V + M K
Sbjct: 376 LNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKP 435
Query: 280 TLVSWNSIIVGFAVNG 295
W +++ ++G
Sbjct: 436 NSAIWGALLNACRIHG 451
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 129/319 (40%), Gaps = 77/319 (24%)
Query: 198 EALECFREMQISGVE-PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
+A+ + EM S V PD T +L AC+ + +L +G IH +V K + V V N L
Sbjct: 118 DAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFL 177
Query: 257 IDLYSRCGCIE-------------------------------FARQVFQRMHKRTLVSWN 285
+ +Y+ CG IE AR++F+ M R +VSW+
Sbjct: 178 VQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWS 237
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL---RYFDIM 342
+I G+ E L F M E +P+ AL+AC+H G +E G RY +
Sbjct: 238 VMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYME-- 295
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLE-------------------------------DA 371
+K R++ R+ ++D+YS+ G +E DA
Sbjct: 296 RKNVRLTVRLG--TALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDA 353
Query: 372 LNVVENMPM---KPNEVVLGSLLAACRTKGDIILAERL---MKYLVDLDPGVDSNYVLLA 425
LN+ M M KPNEV +L AC + M + L P ++ +
Sbjct: 354 LNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAH-HHCCMV 412
Query: 426 NMYAAVGKWDGAGKIRRTM 444
++Y G D A + ++M
Sbjct: 413 DLYGRAGMLDQAQTVIKSM 431
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD---FPSQCLFLGA 102
+ W++ I+ +G+ +A F++M + G PN +TFI +L+ C+ C F +
Sbjct: 335 LAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHS 394
Query: 103 M--IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDGY 159
M I+GL + N ++D+Y + G +D A V +M K +S W A+++
Sbjct: 395 MTSIYGL-------KPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNAC 447
Query: 160 MRRGDIE 166
GD E
Sbjct: 448 RIHGDTE 454
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/411 (41%), Positives = 274/411 (66%), Gaps = 3/411 (0%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ TF + CA S +LG +HG +CK G R +V+ AL+DMY KF + A
Sbjct: 107 PDRFTFPFMFKSCASLGS--CYLGKQVHGHLCKFG-PRFHVVTENALIDMYMKFDDLVDA 163
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
VFD M + +WN+++ GY R G ++ A +F M + +SWTA+++G+ G +
Sbjct: 164 HKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYV 223
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
EA++ FREMQ++G+EPD +++ISVL +CA +G+L +G WIH Y ++ F VCN LI
Sbjct: 224 EAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALI 283
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
++YS+CG I A Q+F +M + ++SW+++I G+A +G A+E FN MQ+ KP+G+
Sbjct: 284 EMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGI 343
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
+F G L+ACSH G+ ++GLRYFD+M++ Y++ P+IEHYGC++D+ +RAG+LE A+ + +
Sbjct: 344 TFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKT 403
Query: 378 MPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGA 437
MPMKP+ + GSLL++CRT G++ +A M +LV+L+P NYVLLAN+YA +GKW+
Sbjct: 404 MPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDV 463
Query: 438 GKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
++R+ ++ ++K PG S IE+ + + EF++GD S I +L+L +
Sbjct: 464 SRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFT 514
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 164/373 (43%), Gaps = 83/373 (22%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+SSF M+D + D++ A R+F+++ + + +++ + + + + ++++
Sbjct: 40 QSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQL 99
Query: 207 QISGVE-PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
E PD T + +CA++G+ +G +H ++ K + +V N LID+Y +
Sbjct: 100 LRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDD 159
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFA--------------------------VNGFVG- 298
+ A +VF M++R ++SWNS++ G+A ++G+ G
Sbjct: 160 LVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGI 219
Query: 299 ----EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR--- 351
EA+++F MQ G +PD +S L +C+ G +E G K I+ + R
Sbjct: 220 GCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG-------KWIHLYAERRGF 272
Query: 352 IEHYG---CIVDLYSRAGRLEDAL----------------------------------NV 374
++ G ++++YS+ G + A+ N
Sbjct: 273 LKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNE 332
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAER---LMKYLVDLDPGVDSNYVLLANMYAAV 431
++ +KPN + LL+AC G R +M+ ++P ++ +Y L ++ A
Sbjct: 333 MQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIE-HYGCLIDVLARA 391
Query: 432 GKWDGAGKIRRTM 444
GK + A +I +TM
Sbjct: 392 GKLERAVEITKTM 404
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 96/226 (42%), Gaps = 21/226 (9%)
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK-P 314
++D + +++A ++F ++ + +NSII + N + + + + ++ F+ P
Sbjct: 48 MVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELP 107
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR--IEHYGCIVDLYSRAGRLEDAL 372
D +F +C+ G G + + + + PR + ++D+Y + L DA
Sbjct: 108 DRFTFPFMFKSCASLGSCYLGKQ---VHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAH 164
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
V + M + + + SLL+ G + A+ L ++D ++ + + Y +G
Sbjct: 165 KVFDEM-YERDVISWNSLLSGYARLGQMKKAKGLFHLMLD---KTIVSWTAMISGYTGIG 220
Query: 433 KWDGAGKIRRTMKGRGIQKK-----------PGLSSIEIGSGIHEF 467
+ A R M+ GI+ L S+E+G IH +
Sbjct: 221 CYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W++ IS + G A F M PN ITF+ LLS C+ +G
Sbjct: 307 VISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSH-------VGMWQ 359
Query: 105 HGLVCKLGLDRNNVMVGT------ALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMID 157
GL + R + + L+D+ A+ G+++ A + M +K S W +++
Sbjct: 360 EGLR-YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLS 418
Query: 158 GYMRRGDIESAVRMFD---EMPVRDAISWTALLNGFVKRGYFEEA 199
G+++ A+ D E+ D ++ L N + G +E+
Sbjct: 419 SCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDV 463
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/430 (43%), Positives = 275/430 (63%), Gaps = 3/430 (0%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
M L P+ T +L C + G IHGL KLG +N+ + +L++Y
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSD--VVNGKTIHGLFQKLGFG-SNLFLQNMILNLYGL 57
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
G M A ++F+ M + + TWN +I +RGDI+ A F MP ++ SWT++++GF
Sbjct: 58 CGEMGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGF 117
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
V+ G EA++ F +++ V P+ VT++SVL ACA++G L +G +H Y K FK NV
Sbjct: 118 VQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNV 177
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
VCNTLID+Y +CGC+E AR+VF M +RT+VSW+++I G A++G EAL F+ M K
Sbjct: 178 HVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKL 237
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
G KP+GV+F G L ACSH GLI++G R+F M Y V P+IEHYGC+VDL+SRAG LE+
Sbjct: 238 GVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEE 297
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
A + +MP+KPN VV G+LL C+ +I LAE +K+L +LDP D YV+++N+YA
Sbjct: 298 AHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAE 357
Query: 431 VGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFD 490
+W+ A ++R+ MK RG++K G SSI + +HEF+AGD++H ++E I + + L
Sbjct: 358 AERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVK 417
Query: 491 LKLCGYVPET 500
+K GY P+T
Sbjct: 418 MKRRGYAPKT 427
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 141/338 (41%), Gaps = 83/338 (24%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WTS IS + G+ EA F ++ PN +T +++L+ CAD L LG ++H
Sbjct: 110 WTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGD--LDLGRIVHEY 167
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
K G R NV V L+DMY K G ++ A VF M ++ +W+AMI G G E
Sbjct: 168 STKSGFKR-NVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAE- 225
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
EAL F EM GV+P+ VT I +L+AC++
Sbjct: 226 ------------------------------EALCLFSEMIKLGVKPNGVTFIGLLHACSH 255
Query: 228 VGTLGIGLWIHRYV--LKQDFK--DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
+G + G R+ + D+ ++ ++DL+SR G +E
Sbjct: 256 MGLIDEG---RRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLE---------------- 296
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC---SHAGLIEDGLRYFD 340
EA E+ SM KP+GV + L C + L E+ +++
Sbjct: 297 ---------------EAHEFILSMP---IKPNGVVWGALLGGCKVHKNIDLAEEAIKHLS 338
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+ + +Y I ++Y+ A R EDA V + M
Sbjct: 339 ELDPLND-----GYYVVISNIYAEAERWEDAARVRKLM 371
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 70/185 (37%), Gaps = 35/185 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I+ G+ EA F+ M G PN +TFI LL C+
Sbjct: 208 VVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHM----------- 256
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
L+D GR A++ D + + ++D + R G
Sbjct: 257 ------------------GLIDE----GRRFFASMTADYGVIPQIEHYGCVVDLFSRAGL 294
Query: 165 IESAVRMFDEMPVR-DAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVL 222
+E A MP++ + + W ALL G + A E + + ++ + Y +IS +
Sbjct: 295 LEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNI 354
Query: 223 NACAN 227
A A
Sbjct: 355 YAEAE 359
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 191/492 (38%), Positives = 289/492 (58%), Gaps = 24/492 (4%)
Query: 19 QNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT-N 77
QN Q PQ + V W IS + + R +A F RM +
Sbjct: 184 QNLRQVFEEMPQRDV------------VSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLR 231
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVC-KLGLDRNNVMVGTALLDMYAKFGRMDL 136
PN T ++ LS C + L LG IH V +LG + +G AL+DMY K G + +
Sbjct: 232 PNEATVVSTLSACIAL--KMLELGKEIHRYVREQLGF---TIKIGNALVDMYCKCGHLSI 286
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A +F+ M +K+ W +M+ GY+ G ++ A +F+ PVRD + WTA++NG+V+ F
Sbjct: 287 AREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRF 346
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
++A+ FREMQI V PD T++++L CA +GTL G WIH Y+ + + V L
Sbjct: 347 DDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTAL 406
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
I++Y++CG IE + ++F + ++ SW SII G A+NG +ALE F M + G KPD
Sbjct: 407 IEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDD 466
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
++F G L+ACSH GL+E+G ++F M +Y++ P++EHYGC++DL RAG+L++A ++E
Sbjct: 467 ITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIE 526
Query: 377 NMPMKPNEVVL---GSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGK 433
P NEV++ G+LL+ACRT G++ + ER+ K LV ++ G S + LLAN+YA+ +
Sbjct: 527 KSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADR 586
Query: 434 WDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493
W+ K+RR MK G++K PG SS+E+ +HEF+ GD SH E IYSML+ S L
Sbjct: 587 WEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLD--SIAKPL 644
Query: 494 CGYVPETVAGEL 505
G + GE+
Sbjct: 645 LGLDENEMEGEI 656
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 167/367 (45%), Gaps = 78/367 (21%)
Query: 52 ISRHCRSGRIAEAALEFTRMTLHGTNPNHIT--FITLLSGCADFPSQCLFLGAMIHGLVC 109
I ++G +A L F ++ G +P++ T F+ GC + G ++G V
Sbjct: 104 IKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVRE----GEKVYGFVV 159
Query: 110 KLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAV 169
K GL+ FD ++ N+++D Y G +++
Sbjct: 160 KSGLE--------------------------FD------TYVCNSLMDMYAEVGRVQNLR 187
Query: 170 RMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNACANV 228
++F+EMP RD +SW L++G+VK +E+A++ FR M Q S + P+ T++S L+AC +
Sbjct: 188 QVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIAL 247
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
L +G IHRYV +Q +K+ N L+D+Y +CG + AR++F M +T++ W S++
Sbjct: 248 KMLELGKEIHRYVREQ-LGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMV 306
Query: 289 VGFA--------------------------VNGFV-----GEALEYFNSMQKEGFKPDGV 317
G+ +NG+V +A+ F MQ + PD
Sbjct: 307 SGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRF 366
Query: 318 SFTGALTACSHAGLIEDGL---RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
+ LT C+ G +E G Y D K + ++++Y++ G +E +L +
Sbjct: 367 TLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGT----ALIEMYAKCGFIEKSLEI 422
Query: 375 VENMPMK 381
+ K
Sbjct: 423 FNGLKEK 429
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 170/352 (48%), Gaps = 24/352 (6%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G++ A R+F+ + + + ++ F K G F +A+ FR+++ G+ PD T V
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
A +G + G ++ +V+K + + VCN+L+D+Y+ G ++ RQVF+ M +R +V
Sbjct: 140 KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVV 199
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKE-GFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
SWN +I G+ +A++ F MQ++ +P+ + L+AC ++E G
Sbjct: 200 SWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRY 259
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
+++ + +I + +VD+Y + G L A + +MP+K + S+++ G +
Sbjct: 260 VREQLGFTIKIGN--ALVDMYCKCGHLSIAREIFNDMPIK-TVICWTSMVSGYVNCGQLD 316
Query: 402 LAERLMKYLVDLDPGVDSN-YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK-------- 452
A L + P D + + N Y ++D A + R M+ + +
Sbjct: 317 EARELF----ERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALL 372
Query: 453 ---PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
L ++E G IH ++ ++ I++ +++E+ + CG++ +++
Sbjct: 373 TGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYA----KCGFIEKSL 420
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 188/458 (41%), Positives = 282/458 (61%), Gaps = 6/458 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV WT+ + R EA L F M G P+ +T + L GCA + +GA
Sbjct: 83 TVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGD--VVVGAQG 140
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + K+GL A++DMYAK G M A VF M+ +S +W ++DG +R
Sbjct: 141 HGCMVKMGLGGVEKAC-NAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEG 199
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLN 223
+ + +FDEMP R+ ++WT ++ G++ G +E+ REM +E +YVT+ S+L
Sbjct: 200 VRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILT 259
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKD-NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC+ G L +G W+H Y LK K+ N+ V ++D+Y++CG I A + F++M +R +V
Sbjct: 260 ACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVV 319
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN+++ G A++G AL+ F M KE KPD V+FT L+ACSH+GL++ G YF +
Sbjct: 320 SWNAMLSGLAMHGLGRAALDIFPQMFKEA-KPDDVTFTSVLSACSHSGLVDQGCFYFGNL 378
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+ +Y ++P++EHY C+VDL RAGRLE+A +V MP++PNEVVLGSLL +C G + L
Sbjct: 379 ESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQL 438
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
E L++ LV LDP ++LL+NMYA GK + A +R+ +K RGI+K PG+SSI +G
Sbjct: 439 GEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQVLKKRGIKKVPGMSSIHVGG 498
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H+F AGD+SH + +Y+ML+ + L+L GY P T
Sbjct: 499 QVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNT 536
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 143/312 (45%), Gaps = 54/312 (17%)
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPV--RDAISWTALLNGFVKRGYFEEALECFREM 206
+F NA++ Y G A ++FDE+P +D + WT L+ FV+ +EAL F EM
Sbjct: 50 TFLHNALLQFYASCGCAWQARKVFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEM 109
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
+ GV+PD VT++ + CA +G + +G H ++K K CN ++D+Y++ G +
Sbjct: 110 RRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLM 169
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
AR+VF M +++VSW I+ G ++ EG
Sbjct: 170 GEARRVFYEMKGQSVVSWTVILDGV---------------IRSEG--------------- 199
Query: 327 SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM----PMKP 382
+ +G FD M + V+ I ++ Y +G +++ +V M M+
Sbjct: 200 -----VRNGRVVFDEMPERNEVAWTI-----MIAGYLDSGLTQESFALVREMIFDLEMEL 249
Query: 383 NEVVLGSLLAACRTKGDIILAERLMKYLV-----DLDPGVDSNYVLLANMYAAVGKWDGA 437
N V L S+L AC GD+++ + Y + +L+ V + V +MYA G+ A
Sbjct: 250 NYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMV---DMYAKCGRIHIA 306
Query: 438 GKIRRTMKGRGI 449
K + M R +
Sbjct: 307 FKFFKKMPQRNV 318
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 178/459 (38%), Positives = 281/459 (61%), Gaps = 35/459 (7%)
Query: 74 HGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFG- 132
+ NP+ TF ++L CA + G +H V K G + +N+ V +L+D+Y K G
Sbjct: 121 NAPNPDEYTFTSVLKACAGLAQ--VLEGQKVHCFVTKYGCE-SNLFVRNSLVDLYFKVGC 177
Query: 133 ------------------------------RMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+D A +VFD M K+ +W+ MI GY R
Sbjct: 178 NCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARV 237
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISV 221
G++E A ++F+ MP+R+ +SW A++ G+ + + +A+E FR+MQ G + P+ VT++SV
Sbjct: 238 GNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSV 297
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+ACA++G L +G WIHR++ + + + + N L D+Y++CGC+ A+ VF MH+R +
Sbjct: 298 LSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDV 357
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+SW+ II+G A+ G+ EA +F M ++G +P+ +SF G LTAC+HAGL++ GL YFD+
Sbjct: 358 ISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDM 417
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M ++Y ++P+IEHYGC+VDL SRAGRL+ A +++ +MPM+PN +V G+LL CR D
Sbjct: 418 MPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAE 477
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
ER++ +++LD + V LAN+YA++G+ D A R M+ K PG S IEI
Sbjct: 478 RGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEIN 537
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ ++EF GD SH +S IYSM+ L + +K+ GY P+T
Sbjct: 538 NSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKT 576
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 139/280 (49%), Gaps = 21/280 (7%)
Query: 163 GDIESAVRMFDE-MPVRDAISWTALLNGFVKRGYFEEALECFREMQI--SGVEPDYVTII 219
G++ +V +F+ + + ++ ALL F + + + F + + PD T
Sbjct: 72 GNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFT 131
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
SVL ACA + + G +H +V K + N+ V N+L+DLY + GC A+++F M R
Sbjct: 132 SVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR 191
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+VSWN++I G+ +G V +A F+ M ++ VS++ ++ + G +E+ + F
Sbjct: 192 DVVSWNTLISGYCFSGMVDKARMVFDGMMEKNL----VSWSTMISGYARVGNLEEARQLF 247
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP----MKPNEVVLGSLLAACR 395
+ M VS + ++ Y++ + DA+ + M + PN+V L S+L+AC
Sbjct: 248 ENMPMRNVVS-----WNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACA 302
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVG 432
G + L + + +++ ++ L LA+MYA G
Sbjct: 303 HLGALDLGKWIHRFI--RRNKIEVGLFLGNALADMYAKCG 340
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 49/254 (19%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLH--GTNPNHITFITLLSGCADFPSQCLFLGAM 103
V W + I+ + ++ + A+A +E R H G PN +T +++LS CA + L LG
Sbjct: 256 VSWNAMIAGYAQNEKYADA-IELFRQMQHEGGLAPNDVTLVSVLSACAHLGA--LDLGKW 312
Query: 104 IHGLVCKLGLDRNNVMV----GTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
IH + RN + V G AL DMYAK G + A VF M + +W+ +I
Sbjct: 313 IHRFI-----RRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIII--- 364
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
G GY EA F EM G+EP+ ++ +
Sbjct: 365 ----------------------------MGLAMYGYANEAFNFFAEMIEDGLEPNDISFM 396
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRM- 276
+L AC + G + GL ++ Q + K+ + ++DL SR G ++ A + M
Sbjct: 397 GLLTACTHAGLVDKGLEYFD-MMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMP 455
Query: 277 HKRTLVSWNSIIVG 290
+ ++ W +++ G
Sbjct: 456 MQPNVIVWGALLGG 469
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 189/457 (41%), Positives = 284/457 (62%), Gaps = 11/457 (2%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
N +Q SSI G L + +M G +PN +F L CA + ++ G
Sbjct: 51 NKFIQTFSSI------GHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFN--VYPGQ 102
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
M+H CK G +++ TALLDMYAK G + A +FD M V+ TWN++I GY R
Sbjct: 103 MLHSHFCKSGF-ASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARS 161
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTIISV 221
G +E+A+ +F++MPVR+ ISWTAL++G+ + G + +ALE F ++ G +P+ V+I SV
Sbjct: 162 GHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASV 221
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRT 280
L AC+ +G L IG I Y F N V N +++L++RCG IE A+QVF + KR
Sbjct: 222 LPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRN 281
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
L SWN++I+G AV+G +AL+ ++ M +PD V+F G L AC+H G++ +G + F+
Sbjct: 282 LCSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFE 341
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M+ ++V+P++EHYGC+VDL RAG L++A N+++NMPM P+ V+ G+LL AC G++
Sbjct: 342 SMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNV 401
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E + L L+P NYV+L+N+YA G W G ++R+ MKG I K+ G S IE+
Sbjct: 402 ELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEV 461
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV 497
G GIHEF+ DRSH++S IY++L + +KL +V
Sbjct: 462 GDGIHEFIVEDRSHLKSGEIYALLHKIYDIIKLHKHV 498
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 33/284 (11%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+I+ ++ D+ A +FD++P + + F G+ + +M G P+
Sbjct: 22 LIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQTFSSIGHPHRCWLLYCQMCSQGCSPN 81
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+ + ACA++ + G +H + K F ++ L+D+Y++ G + ARQ+F
Sbjct: 82 QYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFD 141
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM--------------------------- 307
M R + +WNS+I G+A +G + ALE FN M
Sbjct: 142 EMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEM 201
Query: 308 -----QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
++G KP+ VS L ACS G ++ G R + + +++L+
Sbjct: 202 FIGLENEKGTKPNEVSIASVLPACSQLGALDIGKR-IEAYARNNGFFKNAYVSNAVLELH 260
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+R G +E+A V + + K N +++ G I A +L
Sbjct: 261 ARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGRCIDALQL 304
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 186/482 (38%), Positives = 292/482 (60%), Gaps = 7/482 (1%)
Query: 30 QISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALE-FTRMTLHGTN---PNHITFIT 85
+S T K ++P + ++I R R +A+ F +M H TN P+ TF
Sbjct: 57 HVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPF 116
Query: 86 LLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR 145
++ C C LG +HGLV K G D + + AL+DMY KFG + A VF+ M
Sbjct: 117 VIKSCTGI--LCHRLGMQVHGLVYKFGADFH-CITENALIDMYTKFGDLTNACKVFEEMS 173
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
+ +WN++I GY++ G + SA +FD+MPVR +SWT ++ G+ + G + +AL+ FRE
Sbjct: 174 HRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFRE 233
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
MQ+ G+EPD ++II+VL ACA +G L +G WIH Y K F +CN LI++Y++CGC
Sbjct: 234 MQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGC 293
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
I+ A +F ++ ++ ++SW+++I G A +G EA++ F M K P+ ++F G L A
Sbjct: 294 IDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLA 353
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
CSH GL ++GL+YFD+M Y + P IEHYGC++DL R+G L AL+ + MP+KP+
Sbjct: 354 CSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSR 413
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+ SLL++CR ++ +A +K L++L+P NYVLLANMYA GKW+ IR+ ++
Sbjct: 414 IWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIR 473
Query: 446 GRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGEL 505
+ I+K PG SSIE+ + + EF++ D S S+ ++ +LE L+ + + E V +
Sbjct: 474 NKRIKKTPGSSSIEVNNVVQEFVSSDDSKPFSQEVFWILEGLALNQTRTNDLMEPVEEDK 533
Query: 506 YE 507
+E
Sbjct: 534 HE 535
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 128/309 (41%), Gaps = 61/309 (19%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH V KL L ++N +V T +LD G + AT++F + + FT+NA+I Y
Sbjct: 29 IHAHVVKLSLSQSNFLV-TKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNR 87
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
SA+ +F +M + V PD T V+
Sbjct: 88 HHSSAISVFVQMLTHST----------------------------NSVFPDKFTFPFVIK 119
Query: 224 ACANVGTLGIGLWIHRYVLK-----------------QDFKDNVKVC------------- 253
+C + +G+ +H V K F D C
Sbjct: 120 SCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVIS 179
Query: 254 -NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
N+LI Y + G + AR++F M RT+VSW ++I G+ G G+AL+ F MQ G
Sbjct: 180 WNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGI 239
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
+PD +S L AC+ G +E G ++ + + ++++Y++ G +++A
Sbjct: 240 EPDEISIIAVLPACAQLGALEVG-KWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAW 298
Query: 373 NVVENMPMK 381
N+ + + K
Sbjct: 299 NLFDQLVEK 307
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 184/460 (40%), Positives = 275/460 (59%), Gaps = 3/460 (0%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
KS V V W S I+ + R G EA + M + G P+ +T I ++S CA L
Sbjct: 167 KSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLED--L 224
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
LG H + + GL + V + AL+DMY K G ++ A +FD+M K+ +W M+ G
Sbjct: 225 DLGRESHCYIEENGL-KLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVG 283
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + G ++ A ++FDEMP +D + W A++ G+V +EAL F EMQ + PD VT+
Sbjct: 284 YAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTM 343
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+S L+AC+ +G L +G+WIH Y+ K + NV + LID+Y++CG I A QVFQ +
Sbjct: 344 VSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPG 403
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R ++W +II G A++G A+ YF+ M PD V+F G L+AC H GL+E+G +Y
Sbjct: 404 RNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKY 463
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M + +SP+++HY C+VDL RAG LE+A ++++MP++ + VV G+L ACR G
Sbjct: 464 FSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHG 523
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++++ ER L+ +DP YVLLANMY W AGK R+ M+ RG++K PG SSI
Sbjct: 524 NVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSI 583
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
E+ ++EF+ D+SH +SE IY L L+ L+L P
Sbjct: 584 EVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLELVECTP 623
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 183/378 (48%), Gaps = 68/378 (17%)
Query: 35 TNNSKSTVNP-TVQWTSSISRHCRSGRIAEAALEFTR-MTLHGTNPNHITFITLLSGCAD 92
TN +T NP T W +I S EA + + R + GT P++ T+ L CA
Sbjct: 60 TNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACAR 119
Query: 93 FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTW 152
+ +G+ I G V LG D + F
Sbjct: 120 L--SLIRMGSEILGHVLHLGFDSD--------------------------------IFVS 145
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
NA+I + GD++ A +MFD+ VRD +SW +++NG+V+RG+ EAL +REM++ G++
Sbjct: 146 NAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIK 205
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD VT+I V+++CA + L +G H Y+ + K V + N L+D+Y +CG +E AR++
Sbjct: 206 PDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKL 265
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVG-------------------------------EAL 301
F M +T+VSW +++VG+A +G + EAL
Sbjct: 266 FDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEAL 325
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
FN MQ PD V+ L+ACS G ++ G+ ++K + +S + ++D+
Sbjct: 326 ALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK-HELSLNVALGTALIDM 384
Query: 362 YSRAGRLEDALNVVENMP 379
Y++ G++ A+ V + +P
Sbjct: 385 YAKCGKITKAIQVFQELP 402
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 151/355 (42%), Gaps = 62/355 (17%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
M+L NP F++LL C M+ + + G + ++ A+ ++
Sbjct: 1 MSLQLINP----FLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAI----SE 52
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
+ +D T + R ++F+WN I G++ + AV ++
Sbjct: 53 WRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYK----------------- 95
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
R +Q G +PD T + ACA + + +G I +VL F ++
Sbjct: 96 -------------RVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDI 142
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
V N +I L CG ++ AR++F + R LVSWNS+I G+ G+ EAL ++ M+ E
Sbjct: 143 FVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVE 202
Query: 311 GFKPDGVSFTGALTAC-----------SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
G KPD V+ G +++C SH + E+GL+ + ++
Sbjct: 203 GIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKL------------TVPLANALM 250
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
D+Y + G LE A + ++M K V +++ G + +A +L + D D
Sbjct: 251 DMYMKCGNLESARKLFDSMTNK-TMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKD 304
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 179/457 (39%), Positives = 275/457 (60%), Gaps = 4/457 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRM--TLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V W +S + R R E+ F M +PN +T + +LS C+ L G
Sbjct: 203 VTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKD--LVGGKC 260
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
I+ K G+ N+++ AL+DM+A G MD A VFD M+ + +W +++ G+
Sbjct: 261 IYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTC 320
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
I+ A + FD+MP RD +SWTA+++G+++ F+E L FR+MQ+S V+PD T++S+L
Sbjct: 321 RIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILT 380
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA++G L +G W Y+ K K++ + N LID+Y +CG +E A+++F M K+ +
Sbjct: 381 ACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFT 440
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W ++IVG A NG EAL F+ M + PD +++ G + AC+H GL+ G +F M
Sbjct: 441 WTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMA 500
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ + P + HYGC+VDL RAG L++AL V+ NMP+KPN +V GSLL ACR ++ LA
Sbjct: 501 VQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLA 560
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E +++L+P + YVLL N+YAA KW +R+ M RGI+K PG S +E+
Sbjct: 561 EMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGI 620
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
++EF+AGD+SH +S+ IY+ LE + DL GY P+T
Sbjct: 621 VYEFVAGDKSHPQSKEIYAKLENMKQDLSNAGYSPDT 657
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 155/374 (41%), Gaps = 80/374 (21%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSG----CADFPSQCLFLGAM 103
W + I + R + M +H P+ TF LL G A + L A+
Sbjct: 103 WNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAV 162
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IHG + +N+ V + +++ G ++ A +FD TWN ++ GY R
Sbjct: 163 IHGFL------DSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFK 216
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
E + R+F EM E+ EC V P+ VT++ +L+
Sbjct: 217 RYEESKRLFIEM---------------------EKKCEC--------VSPNSVTLVLMLS 247
Query: 224 ACANVGTLGIGLWIH-RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC+ + L G I+ +Y+ + + N+ + N LID+++ CG ++ AR VF M R ++
Sbjct: 248 ACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVI 307
Query: 283 SWNSIIVGFA--------------------------VNGFV-----GEALEYFNSMQKEG 311
SW SI+ GFA ++G++ E L F MQ
Sbjct: 308 SWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSN 367
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY----GCIVDLYSRAGR 367
KPD + LTAC+H G +E G K Y +I++ ++D+Y + G
Sbjct: 368 VKPDEFTMVSILTACAHLGALELGE-----WAKTYIDKNKIKNDTFIGNALIDMYFKCGN 422
Query: 368 LEDALNVVENMPMK 381
+E A + M K
Sbjct: 423 VEKAKKIFNEMQKK 436
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 140/355 (39%), Gaps = 71/355 (20%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD+ A ++FDE+P W ++ G+ + E + ++ M + ++PD T +L
Sbjct: 83 GDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLL 142
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKD-NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L G + + + F D N+ V I L+S CG + +AR++F +
Sbjct: 143 KGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEV 202
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQK--EGFKPDGVSFTGALTACS------------ 327
V+WN ++ G+ E+ F M+K E P+ V+ L+ACS
Sbjct: 203 VTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIY 262
Query: 328 ----HAGLIE-------------------DGLR-YFDIMK-------------------- 343
G++E D R FD MK
Sbjct: 263 NKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRI 322
Query: 344 ----KIYRVSPRIEH--YGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAAC 394
K + P ++ + ++D Y R R ++ L + +M M KP+E + S+L AC
Sbjct: 323 DLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTAC 382
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYV--LLANMYAAVGKWDGAGKIRRTMKGR 447
G + L E Y +D + + ++ L +MY G + A KI M+ +
Sbjct: 383 AHLGALELGEWAKTY-IDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKK 436
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 187/435 (42%), Positives = 273/435 (62%), Gaps = 5/435 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+T+M L G +PN +F L S CA S G M+H K G +V TAL+DM
Sbjct: 70 YTQMCLQGCSPNEHSFTFLFSACASLSSHQQ--GRMLHTHFVKSGFG-CDVFALTALVDM 126
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YAK G + LA FD M V+ TWN+MI GY R GD+E A+ +F MP R+ SWTA++
Sbjct: 127 YAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMI 186
Query: 188 NGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
+G+ + G + +AL F M+ + + P+ VT+ SVL ACAN+G L +G I Y +
Sbjct: 187 SGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGY 246
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSWNSIIVGFAVNGFVGEALEYFN 305
N+ V N L+++Y+RCG I+ A VF+ + +R L SWNS+I+G AV+G EA+E F
Sbjct: 247 FKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFY 306
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
M +EG PD V+F G L AC+H G++ +G +F+ M++ + ++P++EHYGC+VDL RA
Sbjct: 307 KMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRA 366
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLA 425
G L +A +++ MPM+P+ VV G+LL AC G + LAE+ L +L+P NYV+L+
Sbjct: 367 GELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILS 426
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
N+YA G+WDG ++R+ MKG I K G S IE G IH+F+ DRSH S+ IY++L+
Sbjct: 427 NIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVEDRSHSRSDEIYALLD 486
Query: 486 LLSFDLKLCGYVPET 500
+S +KL G V ++
Sbjct: 487 EVSMKMKLHGNVNDS 501
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 128/289 (44%), Gaps = 10/289 (3%)
Query: 115 RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDE 174
RN + L+ + + A +FD + + F +N +I Y G ++ +
Sbjct: 13 RNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQ 72
Query: 175 MPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
M ++ + S+T L + ++ SG D + ++++ A +G
Sbjct: 73 MCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGL 132
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
L + R + +V N++I Y+RCG +E A ++F+ M R + SW ++I G
Sbjct: 133 LSLA----RKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISG 188
Query: 291 FAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVS 349
+A NG +AL F M++E +P+ V+ L AC++ G +E G R ++ +
Sbjct: 189 YAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGER-IEVYARGNGYF 247
Query: 350 PRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
+ ++++Y+R GR++ A V E + + N S++ G
Sbjct: 248 KNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHG 296
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 188/468 (40%), Positives = 292/468 (62%), Gaps = 9/468 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ + ++G +EA F RM G P+ +T +++S CA + L G IH
Sbjct: 214 VTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCA--LKEGLQIH 271
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V K R+++++G AL+DMYAK +++ A VFD M +++ + +M+ GY R +
Sbjct: 272 ARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASV 331
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
++A MF +M R+ +SW AL+ G+ + G EEAL FR ++ + P + T ++L+AC
Sbjct: 332 KAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSAC 391
Query: 226 ANVGTLGIGLWIHRYVLKQDFK------DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
AN+ L +G H +VLKQ F+ ++ V N+LID+Y +CG IE +VF++M +R
Sbjct: 392 ANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKER 451
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
VSWN+IIVG+A NG+ EAL+ F M G KPD V+ G L ACSHAGL+E+G YF
Sbjct: 452 DCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYF 511
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M++ + + P +HY C+VDL RAG L +A N++E MP+ P+ VV GSLLAAC+ G+
Sbjct: 512 FSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGN 570
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
I + + + L+++DP YVLL+NMYA +G+W ++R+ M+ +G+ K+PG S IE
Sbjct: 571 IEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIE 630
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYE 507
+ S +H F+ D+SH + IYS+L++L+ +K GY+P+ E Y+
Sbjct: 631 VESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDFEAYD 678
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 172/332 (51%), Gaps = 9/332 (2%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHG--LVCKLGLDRNNVMVGTALLDMYAKFGRMD 135
PN F LL C S+ ++H L+ + ++ + + L+D+Y K +D
Sbjct: 13 PNSSPFAKLLDSC--LRSRSARGTRLVHARILMTQFSME---IFIQNRLIDVYGKCDCLD 67
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
A +FD M +++FTWN++I + G ++ A R+F MP D SW ++++GF +
Sbjct: 68 DARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDR 127
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
FEE+LE F +M + + S L+ACA + L +G +H V K + +V + +
Sbjct: 128 FEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSA 187
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
LID+YS+CG + A +VF M +R LV+WNS+I + NG EALE F M G +PD
Sbjct: 188 LIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPD 247
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V+ ++AC+ +++GL+ + K + + +VD+Y++ ++ +A V
Sbjct: 248 EVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVF 307
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ M ++ VV + + + + + A R M
Sbjct: 308 DRMSIR--NVVSETSMVSGYARAASVKAARFM 337
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 179/416 (43%), Gaps = 106/416 (25%)
Query: 45 TVQWTSSISRHCRSGRIAEAA------------------------------LE-FTRMTL 73
T W S IS +SG + EAA LE F +M
Sbjct: 81 TFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHR 140
Query: 74 HGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR 133
N +F + LS CA L +G +H LV K +V +G+AL+DMY+K G
Sbjct: 141 EDFLLNEYSFGSALSACAGLMD--LNMGTQVHALVSKSRYS-TDVYMGSALIDMYSKCGS 197
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR 193
+ A VF M ++ TWN++I Y + G
Sbjct: 198 VACAEEVFSGMIERNLVTWNSLITCYEQNGPA---------------------------- 229
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD-FKDNVKV 252
EALE F M SG+EPD VT+ SV++ACA++ L GL IH V+K + F+D++ +
Sbjct: 230 ---SEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVL 286
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMH-------------------------------KRTL 281
N L+D+Y++C + AR+VF RM +R +
Sbjct: 287 GNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNV 346
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH-AGLIEDGLRYFD 340
VSWN++I G+ NG EAL F +++E P +F L+AC++ A L+ +
Sbjct: 347 VSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTH 406
Query: 341 IMKKIYRVSPRIEHY----GCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLG 388
++K+ + E ++D+Y + G +ED V E M + N +++G
Sbjct: 407 VLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVG 462
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 49/269 (18%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
SK T V W + I+ + ++G EA F + P H TF LLS CA+
Sbjct: 339 SKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLAD-- 396
Query: 98 LFLGAMIHGLVCKLGLD-----RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTW 152
L LG H V K G + +++ VG +L+DMY K G ++ + VF+ M+ + +W
Sbjct: 397 LLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSW 456
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
NA+I GY + GY EAL+ FR+M + G +
Sbjct: 457 NAIIVGY-------------------------------AQNGYGAEALQIFRKMLVCGEK 485
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQD-----FKDNVKVCNTLIDLYSRCGCIE 267
PD+VT+I VL AC++ G + G H + ++ KD+ ++DL R GC+
Sbjct: 486 PDHVTMIGVLCACSHAGLVEEGR--HYFFSMEEHGLIPLKDHY---TCMVDLLGRAGCLN 540
Query: 268 FARQVFQRMH-KRTLVSWNSIIVGFAVNG 295
A+ + + M V W S++ V+G
Sbjct: 541 EAKNLIEAMPVNPDAVVWGSLLAACKVHG 569
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 184/451 (40%), Positives = 279/451 (61%), Gaps = 3/451 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ + + G EA L F M G + T ++LLS + + L LG +H
Sbjct: 204 VSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCN--LDLGRFVH 261
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ G++ +++ V AL+DMYAK G + A VFD M K +W +M++ Y +G +
Sbjct: 262 LYIVITGVEIDSI-VTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLV 320
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E+AV++F+ MPV++ +SW +++ V+ G + EA+E F M ISGV PD T++S+L+ C
Sbjct: 321 ENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCC 380
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+N G L +G H Y+ +V +CN+LID+Y++CG ++ A +F M ++ +VSWN
Sbjct: 381 SNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWN 440
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
II A++GF EA+E F SMQ G PD ++FTG L+ACSH+GL++ G YFDIM
Sbjct: 441 VIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMIST 500
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+R+SP +EHY C+VDL R G L +A+ +++ MP+KP+ VV G+LL ACR G++ +A++
Sbjct: 501 FRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQ 560
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+MK L++L YVLL+NMY+ +WD KIR+ M GI+K +S IEI +
Sbjct: 561 IMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFIEIDGCCY 620
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGY 496
+FM D+ H S IYS+L+ L LK GY
Sbjct: 621 QFMVDDKRHCASTGIYSILDQLMDHLKSVGY 651
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 166/363 (45%), Gaps = 71/363 (19%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
++ L F +M G PN TF +L CA P + ++H KLG+ +
Sbjct: 120 KSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPF--YWEAVIVHAQAIKLGMGPH------ 171
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
+ NA++ Y+ I SA ++FD++ R +S
Sbjct: 172 --------------------------ACVQNAILTAYVACRLILSARQVFDDISDRTIVS 205
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
W +++ G+ K G+ +EA+ F+EM GVE D T++S+L+A + L +G ++H Y++
Sbjct: 206 WNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIV 265
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV----- 297
+ + V N LID+Y++CG ++FA+ VF +M + +VSW S++ +A G V
Sbjct: 266 ITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQ 325
Query: 298 --------------------------GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
EA+E F+ M G PD + L+ CS+ G
Sbjct: 326 IFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGD 385
Query: 332 IEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK---PNEVVL 387
+ G + + I I VS + ++D+Y++ G L+ A+++ MP K V++
Sbjct: 386 LALGKQAHCYICDNIITVSVTL--CNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVII 443
Query: 388 GSL 390
G+L
Sbjct: 444 GAL 446
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 121/257 (47%), Gaps = 4/257 (1%)
Query: 124 LLDMYAKFGRMDL--ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
LLD + R+ L A ++ + + T ++ ++ GD+ A +FD++P +
Sbjct: 45 LLDQCSSMKRLKLVHAQIILHGLAAQV-VTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKF 103
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
+ L+ G+ ++L FR+M +G P+ T VL ACA + +H
Sbjct: 104 MYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQA 163
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
+K + V N ++ Y C I ARQVF + RT+VSWNS+I G++ GF EA+
Sbjct: 164 IKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAI 223
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
F M + G + D + L+A S ++ G R+ + I V ++D+
Sbjct: 224 LLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLG-RFVHLYIVITGVEIDSIVTNALIDM 282
Query: 362 YSRAGRLEDALNVVENM 378
Y++ G L+ A +V + M
Sbjct: 283 YAKCGHLQFAKHVFDQM 299
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 193/503 (38%), Positives = 302/503 (60%), Gaps = 16/503 (3%)
Query: 7 ATILPQPFLPHQQNPNQNL------TTTPQISIQTNNSKSTVNPTV-QWTSSISRHCRSG 59
A IL L H + P NL + +I T++P + +T++I+ +G
Sbjct: 50 AAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASING 109
Query: 60 RIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVM 119
+A L + ++ NPN TF +LL C+ G +IH V K GL +
Sbjct: 110 LKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS------GKLIHTHVLKFGLGIDP-Y 162
Query: 120 VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD 179
V T L+D+YAK G + A VFD M +S + AMI Y ++G++E+A +FD M RD
Sbjct: 163 VATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERD 222
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGV-EPDYVTIISVLNACANVGTLGIGLWIH 238
+SW +++G+ + G+ +AL F+++ G +PD +T+++ L+AC+ +G L G WIH
Sbjct: 223 IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIH 282
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
+V + NVKVC LID+YS+CG +E A VF ++ +V+WN++I G+A++G+
Sbjct: 283 VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQ 342
Query: 299 EALEYFNSMQK-EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC 357
+AL FN MQ G +P ++F G L AC+HAGL+ +G+R F+ M + Y + P+IEHYGC
Sbjct: 343 DALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGC 402
Query: 358 IVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGV 417
+V L RAG+L+ A ++NM M + V+ S+L +C+ GD +L + + +YL+ L+
Sbjct: 403 LVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKN 462
Query: 418 DSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIES 477
YVLL+N+YA+VG ++G K+R MK +GI K+PG+S+IEI + +HEF AGDR H +S
Sbjct: 463 SGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKS 522
Query: 478 EHIYSMLELLSFDLKLCGYVPET 500
+ IY+ML +S +K GYVP T
Sbjct: 523 KEIYTMLRKISERIKSHGYVPNT 545
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 172/425 (40%), Positives = 274/425 (64%), Gaps = 4/425 (0%)
Query: 77 NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
NP+ TF ++L CA + G +H V K G + +N+ V +L+D+Y K G +
Sbjct: 124 NPDEYTFTSVLKACAGLAQ--VLEGQKVHCFVTKYGCE-SNLFVRNSLVDLYFKVGCNCI 180
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A +FD M V+ +WN +I GY G ++ A +FD M ++ +SW+ +++G+ + +
Sbjct: 181 AQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKY 240
Query: 197 EEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
+A+E FR+MQ G + P+ VT++SVL+ACA++G L +G WIHR++ + + + + N
Sbjct: 241 ADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNA 300
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
L D+Y++CGC+ A+ VF MH+R ++SW+ II+G A+ G+ EA +F M ++G +P+
Sbjct: 301 LADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPN 360
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
+SF G LTAC+HAGL++ GL YFD+M ++Y ++P+IEHYGC+VDL SRAGRL+ A +++
Sbjct: 361 DISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLI 420
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
+MPM+PN +V G+LL CR D ER++ +++LD + V LAN+YA++G+ D
Sbjct: 421 NSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLD 480
Query: 436 GAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCG 495
A R M+ K PG S IEI + ++EF GD SH +S IYSM+ L + +K+ G
Sbjct: 481 DAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAG 540
Query: 496 YVPET 500
Y P+T
Sbjct: 541 YKPKT 545
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 41/250 (16%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLH--GTNPNHITFITLLSGCADFPSQCLFLGAM 103
V W++ IS + R+ + A+A +E R H G PN +T +++LS CA + L LG
Sbjct: 225 VSWSTMISGYARNEKYADA-IELFRQMQHEGGLAPNDVTLVSVLSACAHLGA--LDLGKW 281
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH + + ++ + +G AL DMYAK G + A VF M + +W+ +I
Sbjct: 282 IHRFIRRNKIEV-GLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIII------- 333
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
G GY EA F EM G+EP+ ++ + +L
Sbjct: 334 ------------------------MGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLT 369
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRM-HKRT 280
AC + G + GL ++ Q + K+ + ++DL SR G ++ A + M +
Sbjct: 370 ACTHAGLVDKGLEYFD-MMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPN 428
Query: 281 LVSWNSIIVG 290
++ W +++ G
Sbjct: 429 VIVWGALLGG 438
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 180/454 (39%), Positives = 280/454 (61%), Gaps = 3/454 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W + I + S EA L + M H N TF LL C+ + L I
Sbjct: 83 TFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSA--LEETQQI 140
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K+G + + +LL++Y+K G + A ++FD + + + +WN+MIDGY + G+
Sbjct: 141 HAHIIKMGFG-SEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGE 199
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
IE A +F+ MP R+ ISWT++++G V G +EAL F MQ +G++ D V ++S L A
Sbjct: 200 IEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQA 259
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L G WIH Y+ K + + + + LID+Y++CG +E A +VF++M ++ + W
Sbjct: 260 CADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVW 319
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G+A++G EALE+F MQ G +P+ ++FTG LTACSHAGL+ + F+ M++
Sbjct: 320 TAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMER 379
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
I+ P IEHYGC+VDL RAG L++A ++ENMP+KPN + G+LL AC G++ L +
Sbjct: 380 IHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGK 439
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++ K L+ +DPG Y+ LA+++AA G+W+ A ++RR MK +G+ K PG S I +
Sbjct: 440 QIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTA 499
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
HEF+AGD SH + + I MLE + L+ GY P
Sbjct: 500 HEFLAGDESHPQIKEIDHMLEQIVERLREEGYKP 533
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 136/287 (47%), Gaps = 18/287 (6%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAK--FGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHG + K GL + + + LL A G + A VFD + ++F WN MI GY
Sbjct: 37 IHGQMLKTGLILDEI-PASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSN 95
Query: 162 RGDIESAVRMFDEMPV----RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
+ E A+ ++ M +A ++ LL EE + + G + T
Sbjct: 96 SKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYT 155
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
S+LN + G + R + Q D +D V N++ID Y++CG IE A ++F M
Sbjct: 156 TNSLLNVYSKSGDIKSA----RLLFDQVDQRDTVS-WNSMIDGYTKCGEIEMAYEIFNHM 210
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+R ++SW S+I G G EAL F+ MQ G K D V+ L AC+ G+++ G
Sbjct: 211 PERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGK 270
Query: 337 RYFDIMKKI-YRVSPRIEHYGCI-VDLYSRAGRLEDALNVVENMPMK 381
+KK + P + GC+ +D+Y++ G LE+A+ V M K
Sbjct: 271 WIHAYIKKHEIEIDPIL---GCVLIDMYAKCGDLEEAIEVFRKMEEK 314
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/463 (40%), Positives = 279/463 (60%), Gaps = 4/463 (0%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
SK V W S IS + G EA F RM + PN +T + +LS CA
Sbjct: 190 SKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRID-- 247
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L G + + G+D N +++ A+LDMY K G ++ A +FD M K +W MID
Sbjct: 248 LEFGRWACDYIERNGIDIN-LILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMID 306
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYV 216
GY + GD ++A R+FD MP D +W AL++ + + G +EAL FRE+Q++ +P+ V
Sbjct: 307 GYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEV 366
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T+ S L ACA +G + +G WIH Y+ KQ K N + +LID+YS+CG +E A +VF +
Sbjct: 367 TLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSV 426
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+R + W+++I G A++G A++ F+ MQ+ KP+ V+FT L ACSH+GL+++G
Sbjct: 427 ERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGR 486
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+F+ M+ +Y V P +HY C+VD+ RAG LE+A+ ++E MP+ P+ V G+LL ACR
Sbjct: 487 LFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRI 546
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
G++ LAE L++ D YVLL+N+YA GKWD ++R+ MK G++K+PG S
Sbjct: 547 YGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCS 606
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
SIE+ IHEF+ GD SH S IYS L+ + +K GYV +
Sbjct: 607 SIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSD 649
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 181/420 (43%), Gaps = 106/420 (25%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTN--PNHITFITLLSGCADFPSQCLFLGAMIH 105
W + I S + + L F +M LH + PN TF ++ + S L G IH
Sbjct: 98 WNTLIRAFASSPKPIQGLLVFIQM-LHESQRFPNSYTFPFVIKAATEVSS--LLAGQAIH 154
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G+V M A FG DL F N++I Y GD+
Sbjct: 155 GMV------------------MKASFGS-DL-------------FISNSLIHFYSSLGDL 182
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+SA +F ++ +D +SW ++++GFV+ G EEAL+ F+ M++ P+ VT++ VL+AC
Sbjct: 183 DSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSAC 242
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A L G W Y+ + N+ + N ++D+Y +CG +E AR++F +M ++ +VSW
Sbjct: 243 AKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWT 302
Query: 286 SIIVGFA-------------------------------VNGFVGEALEYFNSMQ-KEGFK 313
++I G+A NG EAL F +Q + K
Sbjct: 303 TMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTK 362
Query: 314 PDGVSFTGALTACSHAGLIE-DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
P+ V+ L AC+ G ++ G + I K+ +++ I ++D+YS+ G LE AL
Sbjct: 363 PNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHIT--TSLIDMYSKCGHLEKAL 420
Query: 373 NV----------------------------------VENMPMKPNEVVLGSLLAACRTKG 398
V ++ +KPN V +LL AC G
Sbjct: 421 EVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSG 480
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 154/354 (43%), Gaps = 71/354 (20%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLN 223
++ A ++FD++P + +W L+ F + L F +M S P+ T V+
Sbjct: 80 LDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIK 139
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
A V +L G IH V+K F ++ + N+LI YS G ++ A VF ++ ++ +VS
Sbjct: 140 AATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVS 199
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS---------------- 327
WNS+I GF G EAL+ F M+ E +P+ V+ G L+AC+
Sbjct: 200 WNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIE 259
Query: 328 -------------------HAGLIEDGLRYFDIM------------------------KK 344
G +ED R FD M ++
Sbjct: 260 RNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARR 319
Query: 345 IYRVSPR--IEHYGCIVDLYSRAGRLEDALNVVENMPM----KPNEVVLGSLLAACRTKG 398
++ V PR I + ++ Y + G+ ++AL + + + KPNEV L S LAAC G
Sbjct: 320 VFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLG 379
Query: 399 DIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
+ L + Y+ G+ N+ + L +MY+ G + A ++ +++ R +
Sbjct: 380 AMDLGGWIHVYIK--KQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDV 431
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 178/428 (41%), Positives = 276/428 (64%), Gaps = 3/428 (0%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
M G PN T T++ CA S L G H + K+G + ++V+V TAL+ MYA+
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIAS--LEQGKQAHNYIIKMGFE-SDVVVQTALVHMYAR 57
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
G ++ A VFD M +S+ TWNAMI G+ + D++ A+++F EM RD +SWTA++ G+
Sbjct: 58 CGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGY 117
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
+ GY +E+L F +M+ +G++ D + SVL+ACA++ L +G H YV++ F ++
Sbjct: 118 AQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDI 177
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
V + L+D+Y++ G +E A QVF +M +R VSWNSII G A +G +A+ F M +
Sbjct: 178 VVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQA 237
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
G KP+ +SF G L+ACSH GL+ +G YF++M + Y + P + HY C++DL RAG L++
Sbjct: 238 GIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDE 297
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
A N + MP++P+ V G+LL ACR G+ LA+R+ ++L+ ++ + YVLL+N+YAA
Sbjct: 298 AENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAA 357
Query: 431 VGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFD 490
G+WD A K+R+ MK RG+ K+PG S IE+ + +H F+AG+ SH + + I+ LE LS
Sbjct: 358 AGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRK 417
Query: 491 LKLCGYVP 498
+K GYVP
Sbjct: 418 MKAAGYVP 425
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 30/190 (15%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ + GR +A L F +M G PN I+F+ +LS C+ H
Sbjct: 209 VSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACS-------------H 255
Query: 106 GLVCKLGLDRNNVMVG-----------TALLDMYAKFGRMDLATVVFDAMRVKSSFT-WN 153
+ G N+M T ++D+ + G +D A + M V+ + W
Sbjct: 256 TGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWG 315
Query: 154 AMIDGYMRRGDIESAVRMFDE---MPVRDAISWTALLNGFVKRGYFEEALECFREMQISG 210
A++ G+ E A R+ + M V+ A + L N + G +++A + + M+ G
Sbjct: 316 ALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRG 375
Query: 211 V--EPDYVTI 218
V +P Y I
Sbjct: 376 VMKQPGYSWI 385
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 179/454 (39%), Positives = 279/454 (61%), Gaps = 3/454 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W + I + S EA L + M H N TF LL C+ + I
Sbjct: 83 TFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSAS--EETQQI 140
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K+G + + +LL++Y+K G + A ++FD + + + +WN+MIDGY + G+
Sbjct: 141 HAHIIKMGFG-SEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGE 199
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
IE A +F+ MP R+ ISWT++++G V G +EAL F MQ +G++ D V ++S L A
Sbjct: 200 IEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQA 259
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L G WIH Y+ K + + + + LID+Y++CG +E A +VF++M ++ + W
Sbjct: 260 CADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVW 319
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G+A++G EALE+F MQ G +P+ ++FTG LTACSHAGL+ + F+ M++
Sbjct: 320 TAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMER 379
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
I+ P IEHYGC+VDL RAG L++A ++ENMP+KPN + G+LL AC G++ L +
Sbjct: 380 IHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGK 439
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++ K L+ +DPG Y+ LA+++AA G+W+ A ++RR MK +G+ K PG S I +
Sbjct: 440 QIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTA 499
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
HEF+AGD SH + + I MLE + L+ GY P
Sbjct: 500 HEFLAGDESHPQIKEIDHMLEQIVERLREEGYKP 533
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 136/287 (47%), Gaps = 18/287 (6%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAK--FGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHG + K GL + + + LL A G + A VFD + ++F WN MI GY
Sbjct: 37 IHGQMLKTGLILDEI-PASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSN 95
Query: 162 RGDIESAVRMFDEMPV----RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
+ E A+ ++ M +A ++ LL EE + + G + T
Sbjct: 96 SKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYT 155
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
S+LN + G + R + Q D +D V N++ID Y++CG IE A ++F M
Sbjct: 156 TNSLLNVYSKSGDIKSA----RLLFDQVDQRDTVS-WNSMIDGYTKCGEIEMAYEIFNHM 210
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+R ++SW S+I G G EAL F+ MQ G K D V+ L AC+ G+++ G
Sbjct: 211 PERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGK 270
Query: 337 RYFDIMKKI-YRVSPRIEHYGCI-VDLYSRAGRLEDALNVVENMPMK 381
+KK + P + GC+ +D+Y++ G LE+A+ V M K
Sbjct: 271 WIHAYIKKHEIEIDPIL---GCVLIDMYAKCGDLEEAIEVFRKMEEK 314
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 187/468 (39%), Positives = 287/468 (61%), Gaps = 8/468 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W I+ + ++G EA F RMT G P+ +T +++S CA + G I
Sbjct: 222 VVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAA--FKEGVQI 279
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V K RN++++G AL+DMYAK GR++ A VFD M V+++ + M+ GY +
Sbjct: 280 HARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSAS 339
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+++A MF + +D +SW AL+ G+ + G EEAL FR ++ V P + T ++LNA
Sbjct: 340 VKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNA 399
Query: 225 CANVGTLGIGLWIHRYVLKQDFK------DNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
AN+ L +G H +V+K F+ ++ V N+LID+Y +CG +E +VF+ M +
Sbjct: 400 SANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVE 459
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ VSWN++I+G+A NG+ EALE F M + G KPD V+ G L ACSHAGL+E+G RY
Sbjct: 460 KDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRY 519
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M K + + P +HY C+VDL RAG LE+A +++E+MP +P+ VV SLL+AC+
Sbjct: 520 FFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHR 579
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
+I L + + + + ++DP YVLLANMY+ +G+W A +R+ M+ RG+ K+PG S I
Sbjct: 580 NITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWI 639
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELY 506
+I S +H FM D+ H + + IYS+L+LL+ ++ GYVP+ E Y
Sbjct: 640 DIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPDASDHEAY 687
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 147/266 (55%)
Query: 116 NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM 175
V + L+D+Y K G +D A VFD M ++ F++N++I MR G ++ + +F M
Sbjct: 57 EEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLM 116
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
P +D SW +++ GF + FEEAL+ F M + + S L+AC+ + L +G
Sbjct: 117 PEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGA 176
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
IH + K + +V + + LID YS+CG + AR+VF M ++ +VSWN +I + NG
Sbjct: 177 QIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNG 236
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
EALE F M + GFKPD V+ ++AC+ ++G++ + K + +
Sbjct: 237 PAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILG 296
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMK 381
+VD+Y++ GR+ +A V + MP++
Sbjct: 297 NALVDMYAKCGRVNEARCVFDRMPVR 322
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 170/375 (45%), Gaps = 75/375 (20%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W S I+ + R EA F RM N +F + LS C+ L LGA IHGL
Sbjct: 124 WNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKD--LKLGAQIHGL 181
Query: 108 VCK--LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K LD V +G+ L+D Y+K G + A VFD M K+ +WN +I Y + G
Sbjct: 182 ISKSKYSLD---VFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNG-- 236
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
AI EALE F M G +PD VT+ SV++AC
Sbjct: 237 -------------PAI----------------EALEAFGRMTELGFKPDEVTLASVVSAC 267
Query: 226 ANVGTLGIGLWIHRYVLKQD-FKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-------- 276
A + G+ IH V+K D F++++ + N L+D+Y++CG + AR VF RM
Sbjct: 268 ATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSE 327
Query: 277 -----------------------HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
++ +VSWN++I G+ NG EAL F +++E
Sbjct: 328 TTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVC 387
Query: 314 PDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVS----PRIEHYGCIVDLYSRAGRL 368
P +F L A ++ +E G + + ++K +R P I ++D+Y + G +
Sbjct: 388 PTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSV 447
Query: 369 EDALNVVENMPMKPN 383
E+ L V ENM K +
Sbjct: 448 EEGLRVFENMVEKDH 462
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 119/296 (40%), Gaps = 78/296 (26%)
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
D +L+ C + + +H +++ F + V + N LID+Y +CG +++AR+VF
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 274 QRMHKRTL-------------------------------VSWNSIIVGFAVNGFVGEALE 302
RM +R + SWNS+I GFA + EAL+
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSH---------------------------------- 328
+F M ++ F + SF L+ACS
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202
Query: 329 -AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNE 384
GL+ R FD M++ VS + C++ Y + G +AL M KP+E
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVS-----WNCLITCYEQNGPAIEALEAFGRMTELGFKPDE 257
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGA 437
V L S+++AC T ++ +V D ++ +L L +MYA G+ + A
Sbjct: 258 VTLASVVSACATLAAFKEGVQIHARVVKSDK-FRNDLILGNALVDMYAKCGRVNEA 312
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 181/450 (40%), Positives = 271/450 (60%), Gaps = 20/450 (4%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ M P+ T+ L G S L LG +H V K GLD +NV AL++M
Sbjct: 102 YLEMLERNVKPDCYTYPFLFKGFTR--SVALQLGRELHCHVVKYGLD-SNVFAHNALINM 158
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR-----------------RGDIESAVR 170
Y+ G +D+A +FD TWNAMI GY R G +++A +
Sbjct: 159 YSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARK 218
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
F +MP RD +SWTA+++G+++ ++EAL FREMQ S ++PD T++SVL ACA +G
Sbjct: 219 YFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGA 278
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
L +G WI Y+ K K++ V N LID+Y +CG +E A +F + +R +W +++VG
Sbjct: 279 LELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVG 338
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
A+NG EAL F+ M K PD V++ G L+AC+H G++++G ++F M + + P
Sbjct: 339 LAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEP 398
Query: 351 RIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
I HYGC+VDL +AG L++A +++NMPMKPN +V G+LL ACR D +AER ++ +
Sbjct: 399 NIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQI 458
Query: 411 VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAG 470
++L+P + YVL N+YAA KWD ++R+ M RGI+K PG S IE+ +HEF+AG
Sbjct: 459 LELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAG 518
Query: 471 DRSHIESEHIYSMLELLSFDLKLCGYVPET 500
D+SH +++ IY L ++ DLK+ GY P T
Sbjct: 519 DQSHPQTKEIYGKLNKMTSDLKIAGYSPNT 548
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 29/290 (10%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD+ A ++FD +P SW + G+ + + + + EM V+PD T +
Sbjct: 62 GDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLF 121
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
L +G +H +V+K NV N LI++YS CG I+ AR +F K +V
Sbjct: 122 KGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVV 181
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+WN++I G+ K D +S+T +T + G ++ +YF M
Sbjct: 182 TWNAMISGY------------------NRIKKDVISWTAIVTGFVNTGQVDAARKYFHKM 223
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGD 399
+ VS + ++D Y R ++AL + M +KP+E + S+L AC G
Sbjct: 224 PERDHVS-----WTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGA 278
Query: 400 IILAERLMKYLVDLDPGVDSNYV--LLANMYAAVGKWDGAGKIRRTMKGR 447
+ L E + Y +D + + +V L +MY G + A I T+ R
Sbjct: 279 LELGEWIRTY-IDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQR 327
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 175/448 (39%), Positives = 283/448 (63%), Gaps = 5/448 (1%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT--NPNHITFITLLSGCADFPSQCLFL 100
NP V +SI R + + + L T P+ TF + CA S +L
Sbjct: 70 NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGS--CYL 127
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +HG + K G R +V+ AL+DMY KF + A VFD M + +WN+++ GY
Sbjct: 128 GKQVHGHLYKFG-PRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGYA 186
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R G ++ A +F M + +SWTA+++G+ G + EA++ FREMQ++G+EPD +++IS
Sbjct: 187 RLGQMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLIS 246
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VL +CA++G+L +G WIH Y ++ VCN LI++YS+CG + A Q+F++ +
Sbjct: 247 VLPSCAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKD 306
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
++SW+++I G+A +G A E F MQ+ KP+G++F G L+ACSH GL + GL+YFD
Sbjct: 307 VISWSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGLKYFD 366
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+M++ Y++ P+IEHYGC++D+ +RAG+LE A+ + + MP+KP+ + GSLL++CRTKG++
Sbjct: 367 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTKGNL 426
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+A M +LV+++P NYVLLAN+YA +GKW+ ++R+ ++ ++K PG S IE+
Sbjct: 427 DVALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKKTPGCSLIEV 486
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLS 488
+ + EF+AGD S I +L+L +
Sbjct: 487 NNIVQEFVAGDNSKPFWTEISLVLQLFT 514
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 167/376 (44%), Gaps = 89/376 (23%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+SSF M+D + GD++ A R+F+++ + + +++ + + + + ++++
Sbjct: 40 QSSFMVTKMVDLCDKLGDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQL 99
Query: 207 QISGVE-PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
+E PD T + +CA++G+ +G +H ++ K + +V N LID+Y +
Sbjct: 100 LRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVHGHLYKFGPRFHVVTENALIDMYMKFDD 159
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFA--------------------------VNGFVG- 298
+ A +VF M +R ++SWNS++ G+A ++G+ G
Sbjct: 160 LVDAHKVFDEMSERDVISWNSLLSGYARLGQMKKAKGLFHLMIDKTIVSWTAMISGYTGI 219
Query: 299 ----EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR--- 351
EA+++F MQ G +PD +S L +C+H G +E G K I+ + R
Sbjct: 220 GCYVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGSLELG-------KWIHMYAERRGL 272
Query: 352 IEHYG---CIVDLYSRAGRLEDALNVVENM------------------------------ 378
++ G ++++YS+ G L A+ + E
Sbjct: 273 LKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDVISWSTMISGYAYHGNAHRAFETFIE 332
Query: 379 ----PMKPNEVVLGSLLAACRTKGDIILAERLMKYL------VDLDPGVDSNYVLLANMY 428
+KPN + LL+AC G L ++ +KY ++P ++ +Y L ++
Sbjct: 333 MQRAKVKPNGITFLGLLSACSHVG---LWQQGLKYFDMMRQDYQIEPKIE-HYGCLIDVL 388
Query: 429 AAVGKWDGAGKIRRTM 444
A GK + A +I +TM
Sbjct: 389 ARAGKLERAVEITKTM 404
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 104/245 (42%), Gaps = 21/245 (8%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
IH ++ + + ++DL + G +++A ++F ++ + +NSII + N
Sbjct: 29 IHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSL 88
Query: 297 VGEALEYFNSMQKEGFK-PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR--IE 353
+ + + + ++ + PD +F +C+ G G + + +Y+ PR +
Sbjct: 89 YCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQ---VHGHLYKFGPRFHVV 145
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
++D+Y + L DA V + M + + + SLL+ G + A+ L ++D
Sbjct: 146 TENALIDMYMKFDDLVDAHKVFDEMSER-DVISWNSLLSGYARLGQMKKAKGLFHLMID- 203
Query: 414 DPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK-----------PGLSSIEIGS 462
++ + + Y +G + A R M+ GI+ L S+E+G
Sbjct: 204 --KTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGSLELGK 261
Query: 463 GIHEF 467
IH +
Sbjct: 262 WIHMY 266
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 185/459 (40%), Positives = 279/459 (60%), Gaps = 6/459 (1%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
NP + WT+ I + G E+ L + M G P TF LL C+ + + LG
Sbjct: 103 NPFL-WTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACS--AALDVNLGR 159
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H +G +++ VG L+DMY K G + VFD M + +W ++I Y +
Sbjct: 160 QVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKV 219
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G++E+A +FD +P++D ++WTA++ G+ + EALE F MQ +GV+ D VT++ V+
Sbjct: 220 GNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVI 279
Query: 223 NACANVGTLGIGLWIHRYVLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+ACA +G W+ + F NV V + LID+Y++CG +E A +VF+RM +R
Sbjct: 280 SACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERN 339
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+ S++S+IVGFA++G G A+E F+ M K KP+ V+F G LTACSHAG++E G + F
Sbjct: 340 VYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFA 399
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+M++ + V+P +HY C+VDL RAGRLE+ALN+V+ MPM P+ V G+LL ACR G+
Sbjct: 400 MMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNP 459
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+A+ +L +L+P NY+LL+N+YA+ G+WD K+R+ M+ +G++K PG S +E
Sbjct: 460 DMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEG 519
Query: 461 GSG-IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
G IHEF AGD SH +S I LE L LK GY P
Sbjct: 520 KKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQP 558
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 165/433 (38%), Gaps = 108/433 (24%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMD-LATVVF 141
+++L GC +H + + GL++ ++ L + MD +VF
Sbjct: 42 LVSVLHGCTHINQV-----KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVF 96
Query: 142 DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALE 201
+ + F W A+I GY +G F E++
Sbjct: 97 QQVEYPNPFLWTALIRGYALQGP-------------------------------FMESVL 125
Query: 202 CFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIH-RYVLKQDFKDNVKVCNTLIDLY 260
+ M+ G+ P T ++L AC+ + +G +H + +L F ++ V NTLID+Y
Sbjct: 126 LYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMY 185
Query: 261 SRCGCIEFARQVFQRMHKRTLVSWNSIIV------------------------------- 289
+CGC+ +VF M R ++SW S+IV
Sbjct: 186 VKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVT 245
Query: 290 GFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI-YRV 348
G+A N EALE F MQ G K D V+ G ++AC+ G + D+ ++ +
Sbjct: 246 GYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGP 305
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENM------------------------------ 378
+ + ++D+Y++ G +EDA V E M
Sbjct: 306 TSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDE 365
Query: 379 ----PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD---LDPGVDSNYVLLANMYAAV 431
+KPN V +L AC G + ++L + + + P D +Y + ++
Sbjct: 366 MLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSED-HYACMVDLLGRA 424
Query: 432 GKWDGAGKIRRTM 444
G+ + A + + M
Sbjct: 425 GRLEEALNLVKMM 437
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/453 (39%), Positives = 274/453 (60%), Gaps = 3/453 (0%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W S I+ + R + EA + +M P+ +T I ++S CA S L LG
Sbjct: 217 VRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLES--LKLG 274
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IH + + GL+ +V AL+DMY K G ++ V+FD MR K+ +W MI GY +
Sbjct: 275 REIHRYIEESGLNLKISLV-NALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAK 333
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G ++ A ++F +MP ++ ++W A++ V+ EALE FREMQ S ++PD VT++
Sbjct: 334 NGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHC 393
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+AC+ +G L G+W H Y+ K + +V + LID+Y++CG + A QVF M +R
Sbjct: 394 LSACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNS 453
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
++W +II G A+ G V +A+ YF+ M G PD ++F G LTAC H GL+E+G +YFD
Sbjct: 454 LTWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQ 513
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
MK + +SP+ +HY C+V+L RAG LE+A +++ MPM+ + +V G+L AC +++
Sbjct: 514 MKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLL 573
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
+ ER L+DLDP YVLLANMY GKW+ A IR+ M RG++K PG SSIE+
Sbjct: 574 IGERAASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIEVN 633
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC 494
I+EF+ D+SH +SE IY L++ + +C
Sbjct: 634 GIINEFIVRDKSHPQSEQIYECFNLINKTIGVC 666
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 184/391 (47%), Gaps = 69/391 (17%)
Query: 43 NPTV-QWTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFL 100
NP V W + I S + + + RM T G P++ T+ L CA+ ++
Sbjct: 115 NPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLS--YM 172
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G I G V K+G D+ DMY +N +I +
Sbjct: 173 GFEILGQVLKMGFDK----------DMY----------------------LYNGIIHMLV 200
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G+ A ++FDE VRD +SW +L+NG+V+R EA+ +++M V+PD VT+I
Sbjct: 201 SVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIG 260
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
V++ACA + +L +G IHRY+ + + + N L+D+Y +CG +E + +F M K+T
Sbjct: 261 VVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKT 320
Query: 281 LVSWNSIIVGFAVNGFVG-------------------------------EALEYFNSMQK 309
+VSW ++IVG+A NG + EALE F MQ
Sbjct: 321 VVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQW 380
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
KPD V+ L+ACS G ++ G+ + +KK + +S + ++D+Y++ G +
Sbjct: 381 SNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKK-HNLSLDVALGTALIDMYAKCGNMT 439
Query: 370 DALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
AL V MP + N + +++ G++
Sbjct: 440 KALQVFNEMP-RRNSLTWTAIIGGLALYGNV 469
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 14/225 (6%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVL 222
+++ +++ + + + SW A++ G V+ ++ L ++ M +G PD T +
Sbjct: 102 NLDYCIKILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLF 161
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
CAN+ +G I VLK F ++ + N +I + G A +VF R LV
Sbjct: 162 KVCANLVLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLV 221
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWNS+I G+ EA+ + M E KPD V+ G ++AC+ L +
Sbjct: 222 SWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQ-------LESLKLG 274
Query: 343 KKIYR------VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
++I+R ++ +I ++D+Y + G LE + +NM K
Sbjct: 275 REIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKK 319
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 285/455 (62%), Gaps = 3/455 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ IS + ++ EA + F M +G + + +++LS C+ + G ++H
Sbjct: 255 VSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRL--LVVITGKLVH 312
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
GLV K+G++ V + AL+ MY+ + A +F +WN+MI GY++ G+I
Sbjct: 313 GLVVKVGIE-TYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEI 371
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A +FD MP +D +SW+A+++G+ ++ F E L F+EMQI G +PD ++SV++AC
Sbjct: 372 EKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISAC 431
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++ L G WIH Y+ K K N+ + TLI++Y + GC+E A +VF+ + ++ + +WN
Sbjct: 432 THLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWN 491
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I+G A+NG V ++L+ F+ M++ G P+ ++F L AC H GL+++G R+F+ M +
Sbjct: 492 ALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQE 551
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+++ P I+HYGC+VDL RAG L++A ++E+MPM P+ G+LL AC+ GD ER
Sbjct: 552 HKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGER 611
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ + LV+L P D VLL+N+YA+ G W ++R M+ G+ K PG S IE +H
Sbjct: 612 IGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVH 671
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
EF+AGD++H ++EHI ML+ ++ LKL GY P+T
Sbjct: 672 EFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDT 706
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 179/420 (42%), Gaps = 108/420 (25%)
Query: 79 NHITFITLLSGC----ADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
++ T+ L C A+F +C I V K+G D ++V + L++MYA G +
Sbjct: 125 DNYTYPILFQSCSIRLAEFDGKC------IQDHVLKVGFD-SDVYIQNTLINMYAVCGNL 177
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYM-------------------------------RRG 163
A VFD V +WN+M+ GY+ ++G
Sbjct: 178 SDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKG 237
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
++E A ++F+EM +D +SW+AL++ + + +EEAL F+EM +G+ D V ++SVL+
Sbjct: 238 NVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLS 297
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
AC+ + + G +H V+K + V + N LI +YS C + A+++F +S
Sbjct: 298 ACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQIS 357
Query: 284 WNSIIVGFA--------------------------VNGFV-----GEALEYFNSMQKEGF 312
WNS+I G+ ++G+ E L F MQ EG
Sbjct: 358 WNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGT 417
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
KPD ++AC+H ++ G ++ + + I ++++Y + G +EDAL
Sbjct: 418 KPDETILVSVISACTHLAALDQG-KWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDAL 476
Query: 373 NVVENMPMK----------------------------------PNEVVLGSLLAACRTKG 398
V + + K PNE+ ++L ACR G
Sbjct: 477 EVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMG 536
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 141/284 (49%), Gaps = 19/284 (6%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+I + ++F + + ++ G+++R +A+ ++ M S V D T +
Sbjct: 75 NINQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQ 134
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
+C+ G I +VLK F +V + NTLI++Y+ CG + AR+VF +VS
Sbjct: 135 SCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVS 194
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WNS++ G+ + G V EA + ++ M + ++ + G +E+ + F+ MK
Sbjct: 195 WNSMLAGYVLVGNVEEAKDVYDRMPERNV----IASNSMIVLFGKKGNVEEACKLFNEMK 250
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDI 400
+ VS + ++ Y + E+AL + + M + +EVV+ S+L+AC ++ +
Sbjct: 251 QKDLVS-----WSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSAC-SRLLV 304
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLAN----MYAAVGKWDGAGKI 440
++ +L+ LV + G+++ YV L N MY++ + A K+
Sbjct: 305 VITGKLVHGLV-VKVGIET-YVNLQNALIHMYSSCEEVVTAQKL 346
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/476 (38%), Positives = 288/476 (60%), Gaps = 9/476 (1%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHG--TNPNHITFITLLSGCADFPSQCL 98
++ PT+ W I + ++ E+ F +M HG T+ + TF + + C+ P+
Sbjct: 115 SLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRG 174
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
+ G +HG+V K G + +++ VG +L++MY+ F RM A VFD M + TW +++ G
Sbjct: 175 Y-GENVHGMVVKDGYE-SDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKG 232
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVT 217
Y RG++ A +FD MP R+ +SW ++ G+V ++ EAL+CF +M V+P+
Sbjct: 233 YAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAV 292
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++S+L+ACA++G L G WIH Y+ K + + LID+Y++CG I+ AR+VF +H
Sbjct: 293 LVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLH 352
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
KR L++W S+I G +++G E L F+ M EGFKPD ++ G L CSH+GL+E+GL
Sbjct: 353 KRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLS 412
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
F M ++ + P++EHYGC++DL RAGRLE A +++MPM+P+ V +LL+ACR
Sbjct: 413 IFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIH 472
Query: 398 GDIILAERLMKYLVDLDPGVD-SNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
GD+ L ER++ ++ +L PG YVLL+N+YA++G+W+ K+R+ M RG + PG S
Sbjct: 473 GDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGCS 532
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSML-ELLSFDLKLCGYVPET--VAGELYEND 509
IEI +HEF+A D+ H I L E+L GYVP T V +L E D
Sbjct: 533 WIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFDLNEED 588
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 34/196 (17%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK-RTLVSWNSIIVGFAVNG 295
IH V+ N + LI Y C + FAR VF + + WN +I ++
Sbjct: 74 IHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKTP 133
Query: 296 FVGEALEYFNSMQKEGFKP---DGVSFTGALTACS------------HAGLIEDGLRYFD 340
E+L F+ M G +P D +FT TACS H +++DG D
Sbjct: 134 SSQESLYLFHQMLAHG-RPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYES-D 191
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
I +V++YS R+ DA V + MP + + + S++ +G++
Sbjct: 192 IFVG-----------NSLVNMYSIFSRMVDAKRVFDEMPQR-DVITWTSVVKGYAMRGEL 239
Query: 401 ILAERLMKYLVDLDPG 416
+ A L D+ PG
Sbjct: 240 VRARELF----DMMPG 251
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 189/474 (39%), Positives = 286/474 (60%), Gaps = 8/474 (1%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W S I+ + ++G +A F RM G P+ IT ++ S CA + + G
Sbjct: 214 VRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSA--IREG 271
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IH V K RN++++G AL+DMYAK R++ A +VFD M ++ + +M+ GY +
Sbjct: 272 LQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAK 331
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+++A MF M R+ +SW AL+ G+ + G EEA+ F ++ + P + T ++
Sbjct: 332 ASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNL 391
Query: 222 LNACANVGTLGIGLWIHRYVLKQDF------KDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
LNACAN+ L +G H ++LK F ++ V N+LID+Y +CG +E R VF+R
Sbjct: 392 LNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFER 451
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M +R VSWN++IVG+A NG+ EALE F M G +PD V+ G L+ACSHAGL+E+G
Sbjct: 452 MLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEG 511
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
YF M + + P +HY C+VDL RAG L++A N+++ MPM+P+ VV GSLLAAC+
Sbjct: 512 RCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACK 571
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
G+I L + + + L+++DP YVLL+NMYA +G+W ++R+ M+ G+ K+PG
Sbjct: 572 VHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGC 631
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
S I I S +H FM D+ H + IY +L++L+ +K GYVPE E YE +
Sbjct: 632 SWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPEADDDEPYEEE 685
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 173/325 (53%), Gaps = 5/325 (1%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
F LL C S+ +F ++H + K + + + L+D+Y K G ++ A VFD
Sbjct: 22 FAKLLDTCV--KSKSVFEARLVHARIIKTQFS-SEIFIQNRLVDVYGKCGFLEDARKVFD 78
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
M+ +++F+WNA++ + G ++ A+ +F MP RD SW A+++GF +R FEEAL
Sbjct: 79 HMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRF 138
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
+M + + S L+ACA + L IG+ IH + K + +V + + L+D+YS+
Sbjct: 139 VVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSK 198
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
C + A++ F M R +VSWNS+I + NG G+ALE F M G +PD ++
Sbjct: 199 CRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASV 258
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP 382
+AC+ I +GL+ + K + + +VD+Y++ R+ +A V + MP++
Sbjct: 259 ASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR- 317
Query: 383 NEVVLGSLLAACRTKGDIILAERLM 407
+VV + + + K + A RLM
Sbjct: 318 -DVVSETSMVSGYAKASSVKAARLM 341
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 187/477 (39%), Positives = 282/477 (59%), Gaps = 36/477 (7%)
Query: 65 ALE-FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTA 123
ALE + +M +P TF +L+ C SQ F A +HG V + G D ++V V T+
Sbjct: 64 ALELYVQMLRANVSPTSYTFPSLIKACG-LVSQLRFAEA-VHGHVWRNGFD-SHVFVQTS 120
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD---------- 173
L+D Y+ GR++ + VFD M + F W M+ G +R GD+ SA R+FD
Sbjct: 121 LVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATW 180
Query: 174 ---------------------EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
+MP RD ISWT ++N + + F EAL F EM G+
Sbjct: 181 NTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGIS 240
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD VT+ +V++ACA++G L +G IH Y+++ F +V + + LID+Y++CG ++ + +
Sbjct: 241 PDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLM 300
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F ++ ++ L WNS+I G AV+G+ EAL F+ M++E KP+GV+F L+AC+HAGLI
Sbjct: 301 FFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLI 360
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
E+G + F M + + + P +EHYGC+VDL S+AG LE+AL ++ M ++PN V+ G+LL+
Sbjct: 361 EEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLS 420
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
C+ ++ +A+ L+ L+PG Y LL NM A V +W A KIR TMK +G++K+
Sbjct: 421 GCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEKR 480
Query: 453 -PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEN 508
PG S IE+ S +H+F A D+SH S+ IYS+L L +KL GYVPE E E
Sbjct: 481 CPGSSWIEMESQVHQFAASDKSHAASDEIYSLLAELDGQMKLAGYVPELCEAETVEQ 537
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 44/251 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ WT+ I+ + ++ R EA F M HG +P+ +T T++S CA + L LG IH
Sbjct: 209 ISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGA--LDLGKEIH 266
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + G + +V +G+AL+DMYAK G +D + ++F +R K+ F WN++I+G G
Sbjct: 267 YYIMQHGFNL-DVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYA 325
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A+ MFD+M RE ++P+ VT +SVL+AC
Sbjct: 326 EEALAMFDKME---------------------------RE----KIKPNGVTFVSVLSAC 354
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDN-----VKVCNTLIDLYSRCGCIEFARQVFQRMH-KR 279
+ G + G R +D+ V+ ++DL S+ G +E A Q+ + M +
Sbjct: 355 NHAGLIEEG----RKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEP 410
Query: 280 TLVSWNSIIVG 290
V W +++ G
Sbjct: 411 NAVIWGALLSG 421
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 169/395 (42%), Gaps = 90/395 (22%)
Query: 129 AKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS------ 182
+ F RMD A + + M + + F +NAMI G+++ A+ ++ +M +R +S
Sbjct: 25 STFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQM-LRANVSPTSYTF 83
Query: 183 -----------------------W-----------TALLNGFVKRGYFEEALECFREMQI 208
W T+L++ + G EE++ F EM
Sbjct: 84 PSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPE 143
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
V + T++S L ++ + G + + D N+ NTLID Y+R ++
Sbjct: 144 RDVFA-WTTMVSGLVRVGDMSSAG-----RLFDMMPD--RNLATWNTLIDGYARLREVDV 195
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
A +F +M R ++SW ++I ++ N EAL FN M K G PD V+ ++AC+H
Sbjct: 196 AELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAH 255
Query: 329 AGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL------------------- 368
G ++ G ++ IM+ + + I ++D+Y++ G L
Sbjct: 256 LGALDLGKEIHYYIMQHGFNLDVYIG--SALIDMYAKCGSLDRSLLMFFKLREKNLFCWN 313
Query: 369 ------------EDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLV-- 411
E+AL + + M +KPN V S+L+AC G I + +
Sbjct: 314 SVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRD 373
Query: 412 -DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+ PGV+ +Y + ++ + G + A ++ RTMK
Sbjct: 374 HSIPPGVE-HYGCMVDLLSKAGLLEEALQLIRTMK 407
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 23/292 (7%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N I ++ AV + +M + + + A++ GFV+ +ALE + +M + V
Sbjct: 18 NQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANVS 77
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P T S++ AC V L +H +V + F +V V +L+D YS G IE + +V
Sbjct: 78 PTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRV 137
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F M +R + +W +++ G G + A F+ M PD T +A
Sbjct: 138 FDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMM------PDRNLATWNTLIDGYA--- 188
Query: 333 EDGLRYFDIMKKIYRVSPR--IEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVL 387
LR D+ + ++ P I + +++ YS+ R +AL V M + P+EV +
Sbjct: 189 --RLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTM 246
Query: 388 GSLLAACRTKGDIILAERLMKYLV----DLDPGVDSNYVLLANMYAAVGKWD 435
++++AC G + L + + Y++ +LD + S L +MYA G D
Sbjct: 247 ATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSA---LIDMYAKCGSLD 295
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 97/216 (44%), Gaps = 11/216 (5%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
++ ++K + + + N I S +++A + +M + +N++I GF +
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKKIYR--VSPRIE 353
+ALE + M + P +F + AC GL+ LR+ + + ++R +
Sbjct: 61 PVQALELYVQMLRANVSPTSYTFPSLIKAC---GLVSQ-LRFAEAVHGHVWRNGFDSHVF 116
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
+VD YS GR+E+++ V + MP + + ++++ GD+ A RL + D
Sbjct: 117 VQTSLVDFYSSMGRIEESVRVFDEMPER-DVFAWTTMVSGLVRVGDMSSAGRLFDMMPDR 175
Query: 414 DPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+ + + L + YA + + D A + M R I
Sbjct: 176 NL---ATWNTLIDGYARLREVDVAELLFNQMPARDI 208
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 181/492 (36%), Positives = 289/492 (58%), Gaps = 35/492 (7%)
Query: 40 STVNPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
S NP V W I + ++ +A + RM + PN T+ TL C+ +Q +
Sbjct: 92 SIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVI-DARPNKFTYPTLFKACS--VAQAV 148
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMD----------------------- 135
G IHG V K G+ ++V + +A + MYA FGR++
Sbjct: 149 QEGRQIHGHVVKHGIG-SDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGY 207
Query: 136 -------LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLN 188
A +F M VK+ +WN MI+G + G++ A ++FDEM RD ISW+++++
Sbjct: 208 LKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVD 267
Query: 189 GFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD 248
G++ G ++EALE F++MQ P + SVL AC+N+G + G W+H Y+ + K
Sbjct: 268 GYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKL 327
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
+ + L+D+Y++CG ++ +VF+ M +R + +WN++I G A++G +ALE F+ +Q
Sbjct: 328 DAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQ 387
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
+ KP+G++ G LTAC+HAG ++ GLR F M++ Y V P +EHYGC+VDL R+G
Sbjct: 388 EGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLF 447
Query: 369 EDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMY 428
+A +++ +MPMKPN V G+LL ACR G+ LAER+ K L++L+P YVLL+N+Y
Sbjct: 448 SEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIY 507
Query: 429 AAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
A VG++D KIR+ MK RGI+ PG+S +++ +HEF GD SH + + IY L+++
Sbjct: 508 AKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIK 567
Query: 489 FDLKLCGYVPET 500
L++ G+ P+T
Sbjct: 568 ERLQMAGHSPDT 579
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 4/137 (2%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYS--RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
+H VL+ + V L+ Y+ +FA +VF + + WN +I G N
Sbjct: 52 LHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLEN 111
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
+ +A+ ++ M + +P+ ++ ACS A +++G + + K + + +
Sbjct: 112 NKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVK-HGIGSDVHI 169
Query: 355 YGCIVDLYSRAGRLEDA 371
+ +Y+ GRLEDA
Sbjct: 170 KSAGIQMYASFGRLEDA 186
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 188/503 (37%), Positives = 303/503 (60%), Gaps = 16/503 (3%)
Query: 7 ATILPQPFLPHQQNPNQNL------TTTPQISIQTNNSKSTVNPTV-QWTSSISRHCRSG 59
A IL L H + P NL + +I T++P + +T++I+ +G
Sbjct: 48 AAILRHNLLIHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASING 107
Query: 60 RIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVM 119
+A L + ++ NPN TF ++L C+ G +IH V K GL +
Sbjct: 108 LKDQAFLLYVQLLSSQINPNEFTFSSILKSCSTKS------GKLIHTHVLKFGLGLDP-Y 160
Query: 120 VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD 179
V T L+D+YAK G + A VFD M +S + AMI Y ++G++E+A +FD M RD
Sbjct: 161 VATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERD 220
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGV-EPDYVTIISVLNACANVGTLGIGLWIH 238
+SW +++G+ + G+ +AL F+++ G +PD +T+++ L+AC+ +G L G WIH
Sbjct: 221 IVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIH 280
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
+V + NVKVC LID+YS+CG +E A VF ++ +V+WN++I G+A++G+
Sbjct: 281 VFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQ 340
Query: 299 EALEYFNSMQK-EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC 357
+AL F+ MQ G +P ++F G L AC+HAGL+ +G++ F+ M + Y + P+IEHYGC
Sbjct: 341 DALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGC 400
Query: 358 IVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGV 417
+V L RAG+L+ A +++NM M+ + V+ S+L +C+ G+ +L + + +YL+ +
Sbjct: 401 LVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISN 460
Query: 418 DSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIES 477
YVLL+N+YA VG ++G K+R MK +GI K+PG+S+IEI + +HEF AGDR H++S
Sbjct: 461 SGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDREHLKS 520
Query: 478 EHIYSMLELLSFDLKLCGYVPET 500
+ IY+ML +S +K GYVP T
Sbjct: 521 KEIYTMLRKMSERIKSHGYVPNT 543
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 165/413 (39%), Positives = 263/413 (63%), Gaps = 3/413 (0%)
Query: 87 LSGCADFPSQCL---FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDA 143
L A PS L LG +H L+ + G ++ V +L+ +Y + A VF
Sbjct: 80 LRAAARLPSHLLRRSLLGPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHE 139
Query: 144 MRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF 203
M V+ WN MI GY++ GD+ A +FD MP R+ +SWT ++ G+ + EEA+E F
Sbjct: 140 MAVRDVVAWNVMIAGYVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVF 199
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
R MQ+ G+EPD V ++SVL+AC ++G + +G W+HR+V+++ + + + N++ID+Y +C
Sbjct: 200 RRMQVEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKC 259
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
GCIE A +VF+ M ++++V+W ++I GFA++G +A+E F M++E P+ V+F L
Sbjct: 260 GCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAIL 319
Query: 324 TACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPN 383
+ACSH GL + G YF+IM YR+ P++EHYGC+VDL RAG L++A ++V++MP+K N
Sbjct: 320 SACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKAN 379
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRT 443
+ G+LLAA RT GD L E + +L++L+P NY+LL+N++A +WD K+R+
Sbjct: 380 AAIWGALLAASRTHGDADLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKA 439
Query: 444 MKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGY 496
MK RG++ PG SSIE+ +HEF + D SH I +L ++ ++K G+
Sbjct: 440 MKERGLRNVPGASSIEVDGMVHEFTSRDGSHPFLHKICEVLCEINTNMKSVGF 492
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 182/458 (39%), Positives = 279/458 (60%), Gaps = 8/458 (1%)
Query: 44 PTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
P V +++ I H +S A +++M G PN TF ++L C+ L G
Sbjct: 108 PNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS------LESGK 161
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
++H KLGL +++ V T L+D+YA+ G + A +FD M +S + M+ Y +
Sbjct: 162 VLHCQAIKLGLG-SDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKM 220
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G+++ A +F+ M RD + W ++ G+ + G E+L+ FR M ++ P+ VT+++VL
Sbjct: 221 GELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVL 280
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+AC +G L G WIH Y+ + + NV V LID+YS+CG +E AR VF R+ + +V
Sbjct: 281 SACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVV 340
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+WNS+IVG+A++GF AL+ F M + G KP ++F G L+AC H GL+E+G +F +M
Sbjct: 341 AWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLM 400
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+ Y + P+IEHYGC+V+L RAG LE+A +V+NM + + V+ G+LL CR +I L
Sbjct: 401 RDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKL 460
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
E + K+LVD YVLL+NMYAA G W+G K+R MK GI+K+ G SSIE+ +
Sbjct: 461 GEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDN 520
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+HEF+AG+R H +S+ IY ML ++ LK GY P+T
Sbjct: 521 KVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQT 558
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 163/409 (39%), Gaps = 106/409 (25%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH + + GL N ++ L YA GR+D + VF+ + F+++A+I +++
Sbjct: 66 IHASLLRRGLYHNPIL-NFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQS- 123
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
R+FD GY+ + L C GVEP+ T SVL
Sbjct: 124 ------RLFDR-----------------AFGYYSQMLSC-------GVEPNAFTFSSVLK 153
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
+C +L G +H +K ++ V L+D+Y+R G + ARQ+F +M +R+LVS
Sbjct: 154 SC----SLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVS 209
Query: 284 -------------------------------WNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
WN +I G+A +G E+L+ F M
Sbjct: 210 LTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKA 269
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED-- 370
P+ V+ L+AC G +E G R+ + + + ++D+YS+ G LED
Sbjct: 270 IPNEVTVLAVLSACGQLGALESG-RWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDAR 328
Query: 371 -----------------------------ALNVVENMP---MKPNEVVLGSLLAACRTKG 398
AL + E M KP ++ +L+AC G
Sbjct: 329 LVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGG 388
Query: 399 DIILAE---RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
+ RLM+ ++P ++ +Y + N+ G + A + + M
Sbjct: 389 LVEEGRSFFRLMRDKYGIEPKIE-HYGCMVNLLGRAGHLEEAYGLVKNM 436
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 6/180 (3%)
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
L IH +L++ N + L Y+ G ++ + VF + + S+++II +
Sbjct: 64 LQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQS 123
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
A Y++ M G +P+ +F+ L +CS +E G K+ S
Sbjct: 124 RLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVR 179
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
G +VD+Y+R G + A + + MP + + V L ++L G++ A L + + + D
Sbjct: 180 TG-LVDVYARGGDVVCARQLFDKMPER-SLVSLTTMLTCYSKMGELDKARSLFEGMKERD 237
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 183/459 (39%), Positives = 278/459 (60%), Gaps = 8/459 (1%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTR-MTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NPT +SI R + + A+ F + M L G +P+ TF +L C L G
Sbjct: 40 NPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG-----VLCEG 94
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H KLG ++ + L++MY+ G + A VFD M KS +W MI Y +
Sbjct: 95 KQLHCHSTKLGF-ASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQ 153
Query: 162 RGDIESAVRMFDEMPV-RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
A+++F M + + W ++NG V+ +EEAL F EMQ+SGV+ D VT+ S
Sbjct: 154 WDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMAS 213
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+L AC ++G L +G W+H Y+ K+ + +V + L+D+Y++CG IE A +VFQ M ++
Sbjct: 214 LLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKD 273
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+++W ++IVG A+ G +ALE F+ MQ KPD ++F G L ACSHAGL+ +G+ YF+
Sbjct: 274 VMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFN 333
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M Y + P IEHYGC+VD+ RAGR+ +A ++++NMPM P+ VL LL+ACR G++
Sbjct: 334 SMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNL 393
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
++AER + L++LDP YVLL+N+Y+++ W+ A K+R M R I+K PG S+IE+
Sbjct: 394 VVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEV 453
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
G +HEF+ GD SH +S IY L+ + LK GYVP+
Sbjct: 454 GGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPD 492
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 127/282 (45%), Gaps = 67/282 (23%)
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
G + A +VF+ + ++FT N++I GY + +P R AI + L
Sbjct: 26 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKN-----------LP-RQAILFYQL----- 68
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
M + G++PD T S+ +C G L G +H + K F +
Sbjct: 69 --------------MMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAY 111
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA------------------- 292
+ NTL+++YS CGC+ AR+VF +M +++VSW ++I +A
Sbjct: 112 IQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIAS 171
Query: 293 --------VNGFV-----GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+NG V EAL FN MQ G K D V+ L AC+H G +E G ++
Sbjct: 172 NLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELG-KWL 230
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ + ++ + +VD+Y++ G +E A+ V + MP K
Sbjct: 231 HVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEK 272
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 171/455 (37%), Positives = 278/455 (61%), Gaps = 3/455 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ IS + ++G EA + F M +G + + +++LS CA + G MIH
Sbjct: 270 VSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHL--SIVKTGKMIH 327
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
GLV ++G++ + V + AL+ MY+ G + A +F+ +WN+MI G M+ G +
Sbjct: 328 GLVIRMGIE-SYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSV 386
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A +FD MP +D +SW+A+++G+ + F E L F EMQ+ + PD ++SV++AC
Sbjct: 387 EKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISAC 446
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++ L G W+H Y+ K K NV + TL+D+Y +CGC+E A +VF M ++ + SWN
Sbjct: 447 THLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWN 506
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I+G AVNG V +L+ F+ M+ G P+ ++F G L AC H GL+++G +F M +
Sbjct: 507 ALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEK 566
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ + P ++HYGC+VDL RAG L +A ++E+MPM P+ G+LL AC+ GD + ER
Sbjct: 567 HGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGER 626
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ + L++L P D +VLL+N++A+ G W+ ++R MK +G+ K PG S IE +H
Sbjct: 627 VGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVH 686
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
EF+AGD++H + ML ++ LK+ GY P+T
Sbjct: 687 EFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDT 721
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 197/447 (44%), Gaps = 100/447 (22%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + + + +S +A L + M + P++ T+ ++ CA + F G IH
Sbjct: 109 WNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLE--FGGKEIHDH 166
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V K+G D ++V V L++MYA G M A +FD V S +WN+++ GY+++GD+E
Sbjct: 167 VLKVGFD-SDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEE 225
Query: 168 AVRMFDEMPVR-------------------------------DAISWTALLNGFVKRGYF 196
A +FD+MP R D +SW+AL++G+ + G +
Sbjct: 226 AKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMY 285
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
EEAL F EM +G+ D V ++SVL+ACA++ + G IH V++ + V + N L
Sbjct: 286 EEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNAL 345
Query: 257 IDLYS-------------------------------RCGCIEFARQVFQRMHKRTLVSWN 285
I +YS +CG +E AR +F M ++ +VSW+
Sbjct: 346 IHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWS 405
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G+A + E L F+ MQ +PD ++AC+H ++ G ++K
Sbjct: 406 AVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRK- 464
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK------------------------ 381
+ + ++D+Y + G +E+AL V M K
Sbjct: 465 NGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDM 524
Query: 382 ----------PNEVVLGSLLAACRTKG 398
PNE+ +L ACR G
Sbjct: 525 FSEMKNNGVIPNEITFMGVLGACRHMG 551
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 140/284 (49%), Gaps = 17/284 (5%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ ++++FD + + W ++ +++ E+AL ++ M + V PD T V+ A
Sbjct: 91 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 150
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA G IH +VLK F +V V NTLI++Y+ CG + AR++F VSW
Sbjct: 151 CAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSW 210
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
NSI+ G+ G V EA F+ M + V+ + G + + + F+ M +
Sbjct: 211 NSILAGYVKKGDVEEAKLIFDQMPQRNI----VASNSMIVLLGKMGQVMEAWKLFNEMDE 266
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDII 401
VS + ++ Y + G E+AL + M M+ +EVV+ S+L+AC I+
Sbjct: 267 KDMVS-----WSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSAC-AHLSIV 320
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+++ LV + G++S YV L N A + + G+G+I K
Sbjct: 321 KTGKMIHGLV-IRMGIES-YVNLQN--ALIHMYSGSGEIMDAQK 360
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 181/454 (39%), Positives = 272/454 (59%), Gaps = 3/454 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + +S + R G E M HG P+ IT ++ +S C++ + G H
Sbjct: 307 VLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDD--VSCGKWCH 364
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V + GL+ + V A+++MY K G+ ++A VFD M K+ +WN++I G++R GD+
Sbjct: 365 GYVLRNGLEGWD-NVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDM 423
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
ESA ++F MP D +SW ++ V+ F+EA+E FR MQ G+ D VT++ V +AC
Sbjct: 424 ESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASAC 483
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+G L + WIH Y+ K+D ++ + L+D+++RCG + A QVF +M KR + +W
Sbjct: 484 GYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWT 543
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+ I A+ G A+E F+ M ++G KPDGV F LTA SH GL+E G F MK I
Sbjct: 544 AAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDI 603
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y ++P+ HYGC+VDL RAG L +AL+++ +M M+PN+V+ GSLLAACR ++ +A
Sbjct: 604 YGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAY 663
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ + +LDP +VLL+N+YA+ G+WD K+R +K +G K PG SSIEI I
Sbjct: 664 AAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIF 723
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
EF GD SH E HI ML+ + L+ GYVP+
Sbjct: 724 EFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPD 757
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 163/377 (43%), Gaps = 78/377 (20%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K + V WTS I + + G EA F M G PN +T + ++S CA Q L
Sbjct: 199 KMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKL--QDL 256
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
LG + + +L L+ N +MV AL+DMY K G +D A +FD K+ +N ++
Sbjct: 257 QLGEQVCTCIGELELEVNALMV-NALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSN 315
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y+R +G E L EM G PD +T+
Sbjct: 316 YVR-------------------------------QGLAREVLAVLGEMLKHGPRPDRITM 344
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+S ++AC+ + + G W H YVL+ + VCN +I++Y +CG E A +VF RM
Sbjct: 345 LSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLN 404
Query: 279 RTLVSWNSIIVGFAVNG-------------------------------FVGEALEYFNSM 307
+T VSWNS+I GF NG EA+E F M
Sbjct: 405 KTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVM 464
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE-----HYG-CIVDL 361
Q EG D V+ G +AC + G + D+ K I+ + + H G +VD+
Sbjct: 465 QSEGITADKVTMVGVASACGYLGAL-------DLAKWIHGYIKKKDIHFDMHLGTALVDM 517
Query: 362 YSRAGRLEDALNVVENM 378
++R G + A+ V M
Sbjct: 518 FARCGDPQSAMQVFNKM 534
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 173/363 (47%), Gaps = 58/363 (15%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
+A + F ++ G P++ TF +LS C S L G +HG + K+G +R
Sbjct: 122 KAIVVFRQLMCMGAVPDNFTFPFVLSACT--KSAALTEGFQVHGAIVKMGFER------- 172
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
DM+ + N++I Y G+I+ R+FD+M R+ +S
Sbjct: 173 ---DMFVE----------------------NSLIHFYGECGEIDCMRRVFDKMSERNVVS 207
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
WT+L+ G+ KRG ++EA+ F EM G+ P+ VT++ V++ACA + L +G + +
Sbjct: 208 WTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIG 267
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
+ + + N + N L+D+Y +CG I+ AR++F + LV +N+I+ + G E L
Sbjct: 268 ELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLA 327
Query: 303 YFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLRYFDIMKKIYRVSPR 351
M K G +PD ++ A++ACS H ++ +GL +D +
Sbjct: 328 VLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNV--------- 378
Query: 352 IEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
I+++Y + G+ E A V + M + V SL+A GD+ A ++ +
Sbjct: 379 ---CNAIINMYMKCGKQEMACRVFDRM-LNKTRVSWNSLIAGFVRNGDMESAWKIFSAMP 434
Query: 412 DLD 414
D D
Sbjct: 435 DSD 437
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 34/292 (11%)
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
+++L+ GF G +A+ FR++ G PD T VL+AC L G +H ++
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
K F+ ++ V N+LI Y CG I+ R+VF +M +R +VSW S+I G+A G EA+
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVS 226
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY------------------------ 338
F M + G +P+ V+ G ++AC+ ++ G +
Sbjct: 227 LFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYM 286
Query: 339 ----FDIMKKIYR--VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGS 389
D +KI+ V + Y I+ Y R G + L V+ M +P+ + + S
Sbjct: 287 KCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLS 346
Query: 390 LLAACRTKGDIILAERLMKYLV-DLDPGVDSNYVLLANMYAAVGKWDGAGKI 440
++AC D+ + Y++ + G D+ + NMY GK + A ++
Sbjct: 347 AVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRV 398
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 181/492 (36%), Positives = 289/492 (58%), Gaps = 35/492 (7%)
Query: 40 STVNPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
S NP V W I + ++ +A + RM + PN T+ TL C+ +Q +
Sbjct: 92 SIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVI-DARPNKFTYPTLFKACS--VAQAV 148
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMD----------------------- 135
G IHG V K G+ ++V + +A + MYA FGR++
Sbjct: 149 QEGRQIHGHVVKHGIG-SDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGY 207
Query: 136 -------LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLN 188
A +F M VK+ +WN MI+G + G++ A ++FDEM RD ISW+++++
Sbjct: 208 LKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVD 267
Query: 189 GFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD 248
G++ G ++EALE F++MQ P + SVL AC+N+G + G W+H Y+ + K
Sbjct: 268 GYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKL 327
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
+ + L+D+Y++CG ++ +VF+ M +R + +WN++I G A++G +ALE F+ +Q
Sbjct: 328 DAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQ 387
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
+ KP+G++ G LTAC+HAG ++ GLR F M++ Y V P +EHYGC+VDL R+G
Sbjct: 388 EGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLF 447
Query: 369 EDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMY 428
+A +++ +MPMKPN V G+LL ACR G+ LAER+ K L++L+P YVLL+N+Y
Sbjct: 448 SEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIY 507
Query: 429 AAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
A VG++D KIR+ MK RGI+ PG+S +++ +HEF GD SH + + IY L+++
Sbjct: 508 AKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIK 567
Query: 489 FDLKLCGYVPET 500
L++ G+ P+T
Sbjct: 568 ERLQMAGHSPDT 579
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 152/390 (38%), Gaps = 84/390 (21%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAK--FGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+HGLV + G +++ + G ALL YA F D A VF ++ + F WN +I G +
Sbjct: 52 LHGLVLRSGHFQDHYVSG-ALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110
Query: 162 RGDIESAVRMFDEMPVR---DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+ A+ + M + + ++ L +E + + G+ D
Sbjct: 111 NNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIK 170
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF---------- 268
+ ++ A+ G L R + D V NT+ID Y +CG +E
Sbjct: 171 SAGIHMYASFGRLEDA----RKMFYSGESD-VVCWNTMIDGYLKCGVLEAAKGLFAQMPV 225
Query: 269 ---------------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
AR++F M +R +SW+S++ G+ G EALE F M
Sbjct: 226 KNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQM 285
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRA 365
Q+E +P + L ACS+ G I+ G +K R S +++ ++D+Y++
Sbjct: 286 QREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLK---RNSIKLDAVLGTALLDMYAKC 342
Query: 366 GRLEDALNVVENMP----------------------------------MKPNEVVLGSLL 391
GRL+ V E M MKPN + L +L
Sbjct: 343 GRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVL 402
Query: 392 AACRTKGDIILAERL---MKYLVDLDPGVD 418
AC G + R+ M+ +DP ++
Sbjct: 403 TACAHAGFVDKGLRIFQTMREFYGVDPELE 432
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 179/462 (38%), Positives = 277/462 (59%), Gaps = 18/462 (3%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA---DFPSQCLFLG 101
V W S I+ + G EA F M PN IT + +LS CA DF G
Sbjct: 202 VVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFE-----FG 256
Query: 102 AMIHGLVCKLGLDRNNV----MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
+H + +RN + + A+LDMY K G ++ A +FD M K +W M+
Sbjct: 257 RWVHSYI-----ERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLV 311
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV-EPDYV 216
GY + G+ ++A +FD MP +D +W AL++ + + G +EALE F E+Q+S +PD V
Sbjct: 312 GYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEV 371
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T++S L+ACA +G + +G WIH Y+ KQ K N + +LID+Y +CG ++ A VF +
Sbjct: 372 TLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSV 431
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
++ + W+++I G A++G +A+ F+ MQ++ KP+ V+FT L ACSH GL+E+G
Sbjct: 432 ERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGR 491
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+F+ M+ +Y V P ++HY C+VD+ RAG LE+A+ ++E MPM P V G+LL AC
Sbjct: 492 TFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTI 551
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
+++LAE+ L++L+PG YVLL+N+YA GKWD +R+ M+ G++K+PG S
Sbjct: 552 HENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCS 611
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
SIE+ +HEF+ GD SH ++ IY+ L+ + L+ GYVP
Sbjct: 612 SIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVP 653
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 179/369 (48%), Gaps = 72/369 (19%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTN--PNHITFITLLSGCADFPSQCLFLGAMIH 105
W + I + S ++ L F RM LH + P+ TF L+ ++ LF G H
Sbjct: 103 WNTLIRAYASSSNPHQSLLIFLRM-LHQSPDFPDKFTFPFLIKAASELEE--LFTGKAFH 159
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G+V K+ L ++V + +L+ YAK G + L GY
Sbjct: 160 GMVIKVLLG-SDVFILNSLIHFYAKCGELGL---------------------GY------ 191
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
R+F +P RD +SW +++ FV+ G EEALE F+EM+ V+P+ +T++ VL+AC
Sbjct: 192 ----RVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSAC 247
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A G W+H Y+ + +++ + N ++D+Y++CG +E A+++F +M ++ +VSW
Sbjct: 248 AKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWT 307
Query: 286 SIIVGFAV----------------------NGFVG---------EALEYFNSMQ-KEGFK 313
+++VG+A N + EALE F+ +Q + K
Sbjct: 308 TMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAK 367
Query: 314 PDGVSFTGALTACSHAGLIE-DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
PD V+ L+AC+ G ++ G + I K+ +++ + ++D+Y + G L+ AL
Sbjct: 368 PDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLT--TSLIDMYCKCGDLQKAL 425
Query: 373 NVVENMPMK 381
V ++ K
Sbjct: 426 MVFHSVERK 434
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 138/326 (42%), Gaps = 56/326 (17%)
Query: 72 TLHGTNPNHITF-----------ITLLSGCADFPSQCLFLGAMIHGLVCKLGL-----DR 115
+L NPN IT ++L+ C++ IH + + GL
Sbjct: 16 SLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQL-----KQIHAQMLRTGLFFDPFSA 70
Query: 116 NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM 175
+ ++ AL + F +D A VFD + + +TWN +I Y + ++ +F
Sbjct: 71 SRLITAAAL----SPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIF--- 123
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
R + S PD T ++ A + + L G
Sbjct: 124 ---------------------------LRMLHQSPDFPDKFTFPFLIKAASELEELFTGK 156
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
H V+K +V + N+LI Y++CG + +VF + +R +VSWNS+I F G
Sbjct: 157 AFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGG 216
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
EALE F M+ + KP+G++ G L+AC+ E G R+ + R+ +
Sbjct: 217 CPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFG-RWVHSYIERNRIGESLTLS 275
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMK 381
++D+Y++ G +EDA + + MP K
Sbjct: 276 NAMLDMYTKCGSVEDAKRLFDKMPEK 301
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 190/475 (40%), Positives = 282/475 (59%), Gaps = 8/475 (1%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
TV V W S I+ + ++G + EA F M G P+ +T +++S CA + +
Sbjct: 213 TVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISA--IKE 270
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G IH V K RN++++G ALLDMYAK R++ A ++FD M ++S + +M+ GY
Sbjct: 271 GQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYA 330
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ ++ A MF M V+D I+W AL+ G + G EEAL FR ++ V P + T +
Sbjct: 331 KASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGN 390
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFK------DNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+LNACAN+ L +G H +VLK F+ +V V N+LID+Y +CG +E +VFQ
Sbjct: 391 LLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQ 450
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
M ++ VSWN++IVG+A NGF +ALE F M + G PD V+ G L ACSHAGL+++
Sbjct: 451 HMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDE 510
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
G YF M + + P +HY C+VDL RAG LE+A N++E M M+P+ +V GSLLAAC
Sbjct: 511 GRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAAC 570
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPG 454
+ +I L E ++K L+++DP YVLL+NMYA W ++R+ M+ RG+ K+PG
Sbjct: 571 KVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPG 630
Query: 455 LSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
S IEI ++ FM D+ H + IY +L + +K GYVP + E E++
Sbjct: 631 CSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYVPYVGSNEFDEDE 685
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 167/299 (55%), Gaps = 3/299 (1%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
F LL+ CA S+ + +H + K + + L+D+Y K G +D+A +FD
Sbjct: 22 FSKLLNQCA--RSRSARDTSRVHACIIKSPF-ASETFIQNRLIDVYGKCGCVDVARKLFD 78
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
M ++ F+WN++I + + G ++ AV +F++MP D SW ++++GF + G F+EAL
Sbjct: 79 RMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVY 138
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
F +M G + + S L+ACA + L +G IH V + ++ +V + + L+D+YS+
Sbjct: 139 FAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSK 198
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
CG +E+A+ VF M R+ VSWNS+I + NG V EAL+ F M K G +PD V+
Sbjct: 199 CGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASV 258
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
++AC+ I++G + + K + ++D+Y++ R+ +A + + MP++
Sbjct: 259 VSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIR 317
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 181/376 (48%), Gaps = 81/376 (21%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W S IS + GR EA + F +M HG N +F + LS CA Q L LG+ IH L
Sbjct: 119 WNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGL--QDLKLGSQIHSL 176
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V + ++V +G+AL+DMY+K GR++ A VFD M V+S +WN++I Y + G ++
Sbjct: 177 VYRSNY-LSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDE 235
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A+++F EM ++C GVEPD VT+ SV++ACA
Sbjct: 236 ALKIFVEM------------------------IKC-------GVEPDEVTLASVVSACAT 264
Query: 228 VGTLGIGLWIHRYVLKQD-FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS--- 283
+ + G IH V+K D F++++ + N L+D+Y++C I AR +F M R++VS
Sbjct: 265 ISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETS 324
Query: 284 ----------------------------WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
WN++I G NG EAL F +++E P
Sbjct: 325 MVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPT 384
Query: 316 GVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYG---------CIVDLYSRA 365
+F L AC++ ++ G + + ++K +R YG ++D+Y +
Sbjct: 385 HYTFGNLLNACANLADLQLGRQAHSHVLKHGFRF-----QYGEDSDVFVGNSLIDMYMKC 439
Query: 366 GRLEDALNVVENMPMK 381
G +E+ V ++M K
Sbjct: 440 GSVENGCRVFQHMLEK 455
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 116/267 (43%), Gaps = 46/267 (17%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
S V + W + I+ ++G EA + F + P H TF LL+ CA+
Sbjct: 343 SNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLAD-- 400
Query: 98 LFLGAMIHGLVCKLGL-----DRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTW 152
L LG H V K G + ++V VG +L+DMY K G ++ VF M K +W
Sbjct: 401 LQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSW 460
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
NAMI GY + G+ +ALE F +M SG
Sbjct: 461 NAMIVGY-------------------------------AQNGFGNKALEVFCKMLESGEA 489
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQD----FKDNVKVCNTLIDLYSRCGCIEF 268
PD+VT+I VL AC++ G L G + R + Q KD+ ++DL R G +E
Sbjct: 490 PDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHY---TCMVDLLGRAGYLEE 546
Query: 269 ARQVFQRMHKR-TLVSWNSIIVGFAVN 294
A+ + + M + + W S++ V+
Sbjct: 547 AKNLIEEMSMQPDAIVWGSLLAACKVH 573
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 170/432 (39%), Positives = 276/432 (63%), Gaps = 3/432 (0%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+TR+ + G P+ + ++L + + +G IH LD + V V T+L+ M
Sbjct: 110 YTRIRIDGLRPDSYSIPSVLKAVVKLSA--VEVGRQIHTQTVSSALDMD-VNVATSLIQM 166
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y+ G + A +FD + K WNAM+ GY++ G+++SA ++F+EMP R+ ISWT L+
Sbjct: 167 YSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLI 226
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
G+ + EA+E FR+MQ+ VEPD + +++VL+ACA++G L +G WIH Y+ K
Sbjct: 227 AGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLC 286
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
V + N LID+Y++ G I A +VF+ M ++++++W+++I A++G GEA++ F M
Sbjct: 287 RIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRM 346
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+K +P+ V+F L+ACSH G+++ G YFD M+ +Y++ P+IEHYGC++DL +RAG
Sbjct: 347 EKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGY 406
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
L++A ++ +MP + N ++ GSLLAA T D LA+ +K+L L+PG NYVLL+N
Sbjct: 407 LQEAQKLLHDMPFEANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPGNSGNYVLLSNT 466
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
YAA+GKW+ +G +R+ M+ G++K PG S IEI + ++EF+AGD S + IY +L +
Sbjct: 467 YAALGKWNESGTVRKLMRNAGVKKAPGGSVIEINNIVYEFLAGDMSDSQVHEIYHVLCKI 526
Query: 488 SFDLKLCGYVPE 499
LK+ G E
Sbjct: 527 ILQLKMAGSYQE 538
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 133/314 (42%), Gaps = 70/314 (22%)
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
A+ + ++I G+ PD +I SVL A + + +G IH + +V V +LI
Sbjct: 106 AIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQ 165
Query: 259 LYSRCGCI-------------------------------EFARQVFQRMHKRTLVSWNSI 287
+YS CG + + AR+VF M +R ++SW ++
Sbjct: 166 MYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTL 225
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+A EA+E F MQ E +PD ++ L+AC+ G +E G + ++K +
Sbjct: 226 IAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEK-HG 284
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK-------------------------- 381
+ + Y ++D+Y+++G + AL V ENM K
Sbjct: 285 LCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFL 344
Query: 382 --------PNEVVLGSLLAACRTKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAA 430
PNEV ++L+AC G + + M+ + ++P ++ +Y + ++ A
Sbjct: 345 RMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKIEPKIE-HYGCMIDLLAR 403
Query: 431 VGKWDGAGKIRRTM 444
G A K+ M
Sbjct: 404 AGYLQEAQKLLHDM 417
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 186/475 (39%), Positives = 291/475 (61%), Gaps = 8/475 (1%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
V V W S I+ + ++G +A F M +G P+ IT +++S CA + + +
Sbjct: 213 AVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSA--IRE 270
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G IH V K RN++++G AL+DMYAK R++ A +VFD M +++ + +M+ GY
Sbjct: 271 GLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYA 330
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R +++A MF M ++ +SW AL+ G+ + G EEA+ F ++ + P + T +
Sbjct: 331 RAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGN 390
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDF------KDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+LNACAN+ L +G H +LK F + ++ V N+LID+Y +CG +E VF+
Sbjct: 391 LLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFE 450
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
RM +R +VSWN++IVG+A NG+ ALE F M G KPD V+ G L+ACSHAGL+E+
Sbjct: 451 RMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEE 510
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
G RYF M+ ++P +H+ C+VDL RAG L++A ++++ MPM+P+ VV GSLLAAC
Sbjct: 511 GRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAAC 570
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPG 454
+ G+I L + + + L+++DP YVLL+NMYA +G+W ++R+ M+ RG+ K+PG
Sbjct: 571 KVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPG 630
Query: 455 LSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
S IEI S +H FM D+ H + I+ +L+ L+ +K GYVPE E+ E +
Sbjct: 631 CSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYVPEADDDEICEEE 685
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 165/325 (50%), Gaps = 5/325 (1%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
F LL C S+ IH + K + + + L+D Y K G + A VFD
Sbjct: 22 FAKLLDSCV--RSKSGIDARRIHARIIKTQFS-SEIFIQNRLVDAYGKCGYFEDARKVFD 78
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
M +++F++NA++ + G ++ A +F MP D SW A+++GF + FEEAL
Sbjct: 79 RMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRF 138
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
F +M + + S L+ACA + L +G+ IH + K + +V + + L+D+YS+
Sbjct: 139 FVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSK 198
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
CG + A++ F M R +VSWNS+I + NG G+ALE F M G +PD ++
Sbjct: 199 CGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASV 258
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP 382
++AC+ I +GL+ + K + + +VD+Y++ R+ +A V + MP++
Sbjct: 259 VSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR- 317
Query: 383 NEVVLGSLLAACRTKGDIILAERLM 407
VV + + + + A RLM
Sbjct: 318 -NVVSETSMVCGYARAASVKAARLM 341
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 171/453 (37%), Positives = 276/453 (60%), Gaps = 3/453 (0%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W IS + R E+ M + +P +T + +LS C+ + L +H
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDK--DLCKRVHEY 261
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V + + ++ + AL++ YA G MD+A +F +M+ + +W +++ GY+ RG+++
Sbjct: 262 VSECKTE-PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKL 320
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A FD+MPVRD ISWT +++G+++ G F E+LE FREMQ +G+ PD T++SVL ACA+
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAH 380
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G+L IG WI Y+ K K++V V N LID+Y +CGC E A++VF M +R +W ++
Sbjct: 381 LGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAM 440
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
+VG A NG EA++ F MQ +PD +++ G L+AC+H+G+++ ++F M+ +R
Sbjct: 441 VVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHR 500
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ P + HYGC+VD+ RAG +++A ++ MPM PN +V G+LL A R D +AE
Sbjct: 501 IEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAA 560
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
K +++L+P + Y LL N+YA +W ++RR + I+K PG S IE+ HEF
Sbjct: 561 KKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEF 620
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+AGD+SH++SE IY LE L+ + Y+P+T
Sbjct: 621 VAGDKSHLQSEEIYMKLEELAQESTFAAYLPDT 653
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 157/368 (42%), Gaps = 65/368 (17%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I + E + M G P+ TF LL+G L G +
Sbjct: 99 VVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR-DGGALACGKKL 157
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V K GL +N+ V AL+ MY+ G MD+A VFD + F+WN MI GY R +
Sbjct: 158 HCHVVKFGLG-SNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKE 216
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+EE++E EM+ + V P VT++ VL+A
Sbjct: 217 -------------------------------YEESIELLVEMERNLVSPTSVTLLLVLSA 245
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+ V + +H YV + + ++++ N L++ Y+ CG ++ A ++F+ M R ++SW
Sbjct: 246 CSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISW 305
Query: 285 NSIIVGFA--------------------------VNGFV-----GEALEYFNSMQKEGFK 313
SI+ G+ ++G++ E+LE F MQ G
Sbjct: 306 TSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
PD + LTAC+H G +E G + ++ + ++D+Y + G E A
Sbjct: 366 PDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQK 424
Query: 374 VVENMPMK 381
V +M +
Sbjct: 425 VFHDMDQR 432
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 155/335 (46%), Gaps = 33/335 (9%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G + A ++F ++P D + W ++ G+ K E + + M GV PD T +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 223 NACA-NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
N + G L G +H +V+K N+ V N L+ +YS CG ++ AR VF R K +
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
SWN +I G+ E++E M++ P V+ L+ACS ++D D+
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK---VKDK----DL 254
Query: 342 MKKIY------RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
K+++ + P + +V+ Y+ G ++ A+ + +M + + + S++
Sbjct: 255 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYV 313
Query: 396 TKGDIILAERLMKYLVDLDPGVDS-NYVLLANMYAAVGKWDGAGKIRRTMKGRG------ 448
+G++ LA + D P D ++ ++ + Y G ++ + +I R M+ G
Sbjct: 314 ERGNLKLA----RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEF 369
Query: 449 -----IQKKPGLSSIEIGSGIHEFMAGDRSHIESE 478
+ L S+EIG I ++ D++ I+++
Sbjct: 370 TMVSVLTACAHLGSLEIGEWIKTYI--DKNKIKND 402
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 45/253 (17%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V + WT I + R+G E+ F M G P+ T +++L+ CA S L +G
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS--LEIG 387
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
I + K + +N+V+VG AL+DMY K G + A VF M + FTW AM+ G
Sbjct: 388 EWIKTYIDKNKI-KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVG--- 443
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G +EA++ F +MQ ++PD +T + V
Sbjct: 444 ----------------------------LANNGQGQEAIKVFFQMQDMSIQPDDITYLGV 475
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVC----NTLIDLYSRCGCIEFARQVFQRMH 277
L+AC + G + ++ K ++ ++D+ R G ++ A ++ ++M
Sbjct: 476 LSACNHSGMVDQA---RKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP 532
Query: 278 KRTLVSWNSIIVG 290
++ NSI+ G
Sbjct: 533 ----MNPNSIVWG 541
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 171/453 (37%), Positives = 274/453 (60%), Gaps = 3/453 (0%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W IS + R E+ M + +P +T + +LS C+ + L +
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS 263
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
CK ++ + AL++ YA G MD+A +F +M+ + +W +++ GY+ RG+++
Sbjct: 264 ECK---TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKL 320
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A FD+MPVRD ISWT +++G+++ G F E+LE FREMQ +G+ PD T++SVL ACA+
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAH 380
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G+L IG WI Y+ K K++V V N LID+Y +CGC E A++VF M +R +W ++
Sbjct: 381 LGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAM 440
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
+VG A NG EA++ F MQ +PD +++ G L+AC+H+G+++ ++F M+ +R
Sbjct: 441 VVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHR 500
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ P + HYGC+VD+ RAG +++A ++ MPM PN +V G+LL A R D +AE
Sbjct: 501 IEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAA 560
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
K +++L+P + Y LL N+YA +W ++RR + I+K PG S IE+ HEF
Sbjct: 561 KKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEF 620
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+AGD+SH++SE IY LE L+ + Y+P+T
Sbjct: 621 VAGDKSHLQSEEIYMKLEELAQESTFAAYLPDT 653
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 157/368 (42%), Gaps = 65/368 (17%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I + E + M G P+ TF LL+G L G +
Sbjct: 99 VVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR-DGGALACGKKL 157
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V K GL +N+ V AL+ MY+ G MD+A VFD + F+WN MI GY R +
Sbjct: 158 HCHVVKFGLG-SNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKE 216
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+EE++E EM+ + V P VT++ VL+A
Sbjct: 217 -------------------------------YEESIELLVEMERNLVSPTSVTLLLVLSA 245
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+ V + +H YV + + ++++ N L++ Y+ CG ++ A ++F+ M R ++SW
Sbjct: 246 CSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISW 305
Query: 285 NSIIVGFA--------------------------VNGFV-----GEALEYFNSMQKEGFK 313
SI+ G+ ++G++ E+LE F MQ G
Sbjct: 306 TSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
PD + LTAC+H G +E G + ++ + ++D+Y + G E A
Sbjct: 366 PDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQK 424
Query: 374 VVENMPMK 381
V +M +
Sbjct: 425 VFHDMDQR 432
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 155/335 (46%), Gaps = 33/335 (9%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G + A ++F ++P D + W ++ G+ K E + + M GV PD T +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 223 NACA-NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
N + G L G +H +V+K N+ V N L+ +YS CG ++ AR VF R K +
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
SWN +I G+ E++E M++ P V+ L+ACS ++D D+
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK---VKDK----DL 254
Query: 342 MKKIY------RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
K+++ + P + +V+ Y+ G ++ A+ + +M + + + S++
Sbjct: 255 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYV 313
Query: 396 TKGDIILAERLMKYLVDLDPGVDS-NYVLLANMYAAVGKWDGAGKIRRTMKGRG------ 448
+G++ LA + D P D ++ ++ + Y G ++ + +I R M+ G
Sbjct: 314 ERGNLKLA----RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEF 369
Query: 449 -----IQKKPGLSSIEIGSGIHEFMAGDRSHIESE 478
+ L S+EIG I ++ D++ I+++
Sbjct: 370 TMVSVLTACAHLGSLEIGEWIKTYI--DKNKIKND 402
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 45/253 (17%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V + WT I + R+G E+ F M G P+ T +++L+ CA S L +G
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS--LEIG 387
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
I + K + +N+V+VG AL+DMY K G + A VF M + FTW AM+ G
Sbjct: 388 EWIKTYIDKNKI-KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVG--- 443
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G +EA++ F +MQ ++PD +T + V
Sbjct: 444 ----------------------------LANNGQGQEAIKVFFQMQDMSIQPDDITYLGV 475
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVC----NTLIDLYSRCGCIEFARQVFQRMH 277
L+AC + G + ++ K ++ ++D+ R G ++ A ++ ++M
Sbjct: 476 LSACNHSGMVDQA---RKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP 532
Query: 278 KRTLVSWNSIIVG 290
++ NSI+ G
Sbjct: 533 ----MNPNSIVWG 541
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/451 (41%), Positives = 275/451 (60%), Gaps = 13/451 (2%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
N +Q SSI G L + +M G +PN +F L CA + ++ G
Sbjct: 51 NKFIQTFSSI------GHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFN--VYPGQ 102
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
M+H CK G +++ TALLDMYAK G + A +FD M V+ TWN++I GY R
Sbjct: 103 MLHSHFCKSGF-ASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARS 161
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTIISV 221
G +E+A+ +F++MPVR+ ISWTAL++G+ + G + +ALE F ++ G +P+ V+I SV
Sbjct: 162 GHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASV 221
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRT 280
L AC+ +G L IG I Y F N V N +++L++RCG IE A+QVF + KR
Sbjct: 222 LPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRN 281
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
L SWN++I+G AV+G +AL+ ++ M +PD V+F G L AC+H G++ +G + F+
Sbjct: 282 LCSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFE 341
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M+ ++V+P++EHYGC+VDL RAG L++A N+++NMPM P+ V+ G+LL AC G++
Sbjct: 342 SMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNV 401
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E + L L+P NYV+L+N+YA G W G ++R+ MKG I K+ G S IE+
Sbjct: 402 ELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEV 461
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
G GIHEF+ DR I S + L LL L
Sbjct: 462 GDGIHEFIVEDR--ITSRCVQPFLLLLHVTL 490
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 59/297 (19%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+I+ ++ D+ A +FD++P + + F G+ + +M G P+
Sbjct: 22 LIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQTFSSIGHPHRCWLLYCQMCSQGCSPN 81
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+ + ACA++ + G +H + K F ++ L+D+Y++ G + ARQ+F
Sbjct: 82 QYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFD 141
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM--------------------------- 307
M R + +WNS+I G+A +G + ALE FN M
Sbjct: 142 EMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEM 201
Query: 308 -----QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG------ 356
++G KP+ VS L ACS G ++ G RIE Y
Sbjct: 202 FIGLENEKGTKPNEVSIASVLPACSQLGALDIG--------------KRIEAYARNNGFF 247
Query: 357 -------CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+++L++R G +E+A V + + K N +++ G I A +L
Sbjct: 248 KNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGRCIDALQL 304
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/454 (40%), Positives = 284/454 (62%), Gaps = 19/454 (4%)
Query: 63 EAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG 121
+A L F M PN TF ++ C ++ L G +HGL K GLD + +V
Sbjct: 94 DALLVFIEMVEDCSVEPNCFTFPSVFKACGR--AERLREGRQVHGLAVKFGLDSDEFVVS 151
Query: 122 TALLDMYAKFGRMDLATVVF---------DAMRVKSS------FTWNAMIDGYMRRGDIE 166
++ MY G M+ A +F D +R K WN MIDGY+R G++E
Sbjct: 152 N-VVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELE 210
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A +FDEMP R +SW ++ G+ + G+F+EA+E FREMQ++ V P+YVT++SVL A +
Sbjct: 211 VARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMS 270
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+G L +G W+H Y ++ + + + + LID+Y++CG IE A QVF+ + KR +V+W++
Sbjct: 271 RLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWST 330
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
II G A++G + L++F M++ G P V++ G L+ACSHAGL+ +G +FD M ++
Sbjct: 331 IIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVS 390
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+ PRIEHYGC+VDL RAG LE++ ++ NMP+KP++V+ +LL AC+ G++ + +R+
Sbjct: 391 GLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRV 450
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHE 466
++L++L P +YV L+N+YA++G W+G K+R MK ++K PG S IE+ IHE
Sbjct: 451 AEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHE 510
Query: 467 FMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F+ D SH +S+ I+SML+ +S +L L GY P T
Sbjct: 511 FLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNT 544
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 43/225 (19%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W I+ + +SG EA F M + PN++T +++L + LGA+
Sbjct: 224 VVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSR-------LGALE 276
Query: 105 HGLVCKLGLDRNNV----MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G L RNN+ ++G+AL+DMYAK G ++ A VF+ + ++ TW+ +I
Sbjct: 277 LGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTII---- 332
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G G ++ L+ F +M+ +GV P VT I
Sbjct: 333 ---------------------------AGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIG 365
Query: 221 VLNACANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCG 264
+L+AC++ G + G W ++++ + ++ ++DL R G
Sbjct: 366 LLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAG 410
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 105/294 (35%), Gaps = 88/294 (29%)
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE-GFKPDGVSFTGALT 324
+++AR++F+ MH+ S+N++I + + +AL F M ++ +P+ +F
Sbjct: 61 LDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFK 120
Query: 325 ACSHA-----------------------------------GLIEDGLRYF---------- 339
AC A G++ED R F
Sbjct: 121 ACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCD 180
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK------------------ 381
I K RV + + ++D Y R G LE A N+ + MP +
Sbjct: 181 GIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHF 240
Query: 382 ----------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL-- 423
PN V L S+L A G + L + + Y V + GVD VL
Sbjct: 241 KEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDD--VLGS 298
Query: 424 -LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIE 476
L +MYA G + A ++ + R + S+I G +H H E
Sbjct: 299 ALIDMYAKCGSIEKALQVFEGLPKRNVVT---WSTIIAGLAMHGRAKDTLDHFE 349
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 179/460 (38%), Positives = 277/460 (60%), Gaps = 3/460 (0%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S V V W S I+ + R G EA + +M P+ +T I ++S A + L
Sbjct: 215 ESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLEN--L 272
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
LG +H + ++GL+ V + AL+DMY K ++ A ++F+ M K+ +W M+ G
Sbjct: 273 ALGRKLHQSIEEMGLNLT-VPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIG 331
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + G +ESAVR+F+EMP +D + W AL+ GFV+ +EAL F EMQ S V PD +T+
Sbjct: 332 YAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITV 391
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
++ L+AC+ +G L +G+W+H YV K + NV + L+D+Y++CG I+ A QVF+ M
Sbjct: 392 VNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPG 451
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R ++W +II G A++G A+ YF+ M G PD ++F G L+AC H GL++ G Y
Sbjct: 452 RNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDY 511
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M Y +SP+++HY C+VDL RAG LE+A ++ +MP +P+ VV G+L R G
Sbjct: 512 FYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHG 571
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ + ER L++LDP YVLLANMY W+ A K+R+ M+ RG++K PG SSI
Sbjct: 572 NVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSI 631
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
E+ +++F+ D+SH +SE IY L L+ +++ P
Sbjct: 632 EMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIEVIEVDP 671
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 173/375 (46%), Gaps = 68/375 (18%)
Query: 37 NSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPS 95
N+ + +N W +I + S A L + M G+ P++ T+ L CA F
Sbjct: 112 NNAANLN-XFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSL 170
Query: 96 QCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAM 155
+ I G V +LG D DL F NA+
Sbjct: 171 S--WTANEILGHVIQLGFDS-------------------DL-------------FVHNAI 196
Query: 156 IDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
I + G++ +A ++FDE VRD +SW +++NG+V+ G +EA + + +M V PD
Sbjct: 197 IHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDE 256
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
VT+I V++A A + L +G +H+ + + V + N L+D+Y +C IE A+ +F+
Sbjct: 257 VTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFEN 316
Query: 276 MHKRTLVSWNSIIVGFA--------------------------VNGFV-----GEALEYF 304
M K+T+VSW ++++G+A + GFV EAL F
Sbjct: 317 MTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALF 376
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
+ MQ PD ++ L+ACS G ++ G+ + K + ++ + +VD+Y++
Sbjct: 377 HEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK-HNLTMNVALGTALVDMYAK 435
Query: 365 AGRLEDALNVVENMP 379
G ++ A+ V E MP
Sbjct: 436 CGNIKKAIQVFEEMP 450
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGVE-PDYVTIISVLNACANVGTLGIGLWI 237
+ SW + G+V+ A+ +R M G PD T + CA I
Sbjct: 118 NXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEI 177
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
+V++ F ++ V N +I + CG + AR++F R LVSWNSII G+ G
Sbjct: 178 LGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLA 237
Query: 298 GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC 357
EA + + M + PD V+ G ++A + + G + ++++ ++ +
Sbjct: 238 DEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEM-GLNLTVPLANA 296
Query: 358 IVDLYSRAGRLEDALNVVENMPMK 381
++D+Y + +E A + ENM K
Sbjct: 297 LMDMYIKCKNIEAAKILFENMTKK 320
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 179/460 (38%), Positives = 277/460 (60%), Gaps = 3/460 (0%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S V V W S I+ + R G EA + +M P+ +T I ++S A + L
Sbjct: 215 ESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLEN--L 272
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
LG +H + ++GL+ V + AL+DMY K ++ A ++F+ M K+ +W M+ G
Sbjct: 273 ALGRKLHQSIEEMGLNLT-VPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIG 331
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + G +ESAVR+F+EMP +D + W AL+ GFV+ +EAL F EMQ S V PD +T+
Sbjct: 332 YAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITV 391
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
++ L+AC+ +G L +G+W+H YV K + NV + L+D+Y++CG I+ A QVF+ M
Sbjct: 392 VNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPG 451
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R ++W +II G A++G A+ YF+ M G PD ++F G L+AC H GL++ G Y
Sbjct: 452 RNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDY 511
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M Y +SP+++HY C+VDL RAG LE+A ++ +MP +P+ VV G+L R G
Sbjct: 512 FYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHG 571
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ + ER L++LDP YVLLANMY W+ A K+R+ M+ RG++K PG SSI
Sbjct: 572 NVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSI 631
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
E+ +++F+ D+SH +SE IY L L+ +++ P
Sbjct: 632 EMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIEVIEVDP 671
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 173/375 (46%), Gaps = 68/375 (18%)
Query: 37 NSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPS 95
N+ + +N W +I + S A L + M G+ P++ T+ L CA F
Sbjct: 112 NNAANLN-VFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSL 170
Query: 96 QCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAM 155
+ I G V +LG D DL F NA+
Sbjct: 171 S--WTANEILGHVIQLGFDS-------------------DL-------------FVHNAI 196
Query: 156 IDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
I + G++ +A ++FDE VRD +SW +++NG+V+ G +EA + + +M V PD
Sbjct: 197 IHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDE 256
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
VT+I V++A A + L +G +H+ + + V + N L+D+Y +C IE A+ +F+
Sbjct: 257 VTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFEN 316
Query: 276 MHKRTLVSWNSIIVGFA--------------------------VNGFV-----GEALEYF 304
M K+T+VSW ++++G+A + GFV EAL F
Sbjct: 317 MTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALF 376
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
+ MQ PD ++ L+ACS G ++ G+ + K + ++ + +VD+Y++
Sbjct: 377 HEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK-HNLTMNVALGTALVDMYAK 435
Query: 365 AGRLEDALNVVENMP 379
G ++ A+ V E MP
Sbjct: 436 CGNIKKAIQVFEEMP 450
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGVE-PDYVTIISVLNACANVGTLGIGLWI 237
+ SW + G+V+ A+ +R M G PD T + CA I
Sbjct: 118 NVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEI 177
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
+V++ F ++ V N +I + CG + AR++F R LVSWNSII G+ G
Sbjct: 178 LGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLA 237
Query: 298 GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC 357
EA + + M + PD V+ G ++A + + G + ++++ ++ +
Sbjct: 238 DEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEM-GLNLTVPLANA 296
Query: 358 IVDLYSRAGRLEDALNVVENMPMK 381
++D+Y + +E A + ENM K
Sbjct: 297 LMDMYIKCKNIEAAKILFENMTKK 320
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 185/456 (40%), Positives = 270/456 (59%), Gaps = 35/456 (7%)
Query: 76 TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMY------- 128
+P TF +L+ C+ L G +HG + K G D ++V V TAL+D Y
Sbjct: 6 VSPTSFTFSSLVKACSLVSE--LGFGEAVHGHIWKYGFD-SHVFVQTALVDFYGNAGKIV 62
Query: 129 ------------------------AKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
A+ G M A +FD M V+++ +WNAMIDGY R +
Sbjct: 63 EARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRN 122
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ESA +F +MP RD ISWT ++ + + F EAL F EMQ +G++PD VT+ ++++A
Sbjct: 123 VESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISA 182
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L +G IH Y ++ F +V + + LID+Y++CG ++ + VF ++ K+ L W
Sbjct: 183 CAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCW 242
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
NSII G AV+G+ EAL F+ MQ+E KP+GV+F L AC+HAGL+E+G + F M +
Sbjct: 243 NSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSR 302
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ + P IEHYGC+VDL +AG LEDAL +V +M M+PN V+ G+LL C+ ++ +A+
Sbjct: 303 DFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKIAQ 362
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQK-KPGLSSIEIGSG 463
+ L+P Y LL NMYA V +W IR TMK G++K PG S IE+
Sbjct: 363 VAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSWIEMDRK 422
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
IH+F A D+SH+ S+ IY++L L LKL GYVPE
Sbjct: 423 IHQFAASDKSHLASDEIYTLLVELDGQLKLSGYVPE 458
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 184/470 (39%), Positives = 278/470 (59%), Gaps = 15/470 (3%)
Query: 41 TVNPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
T NP V WT I+ H A +++M H PN T +LL C P++
Sbjct: 81 TPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHPARA-- 138
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+H K GL +++ V T L+D YA+ G + A +FDAM +S ++ AM+ Y
Sbjct: 139 ----VHSHAIKFGLS-SHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCY 193
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-------GVE 212
+ G + A +F+ M ++D + W +++G+ + G EAL FR+M + V
Sbjct: 194 AKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVR 253
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P+ +T+++VL++C VG L G W+H YV K NV+V L+D+Y +CG +E AR+V
Sbjct: 254 PNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKV 313
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F M + +V+WNS+I+G+ ++GF EAL+ F+ M G KP ++F LTAC+HAGL+
Sbjct: 314 FDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLV 373
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
G FD MK Y + P++EHYGC+V+L RAGR+++A ++V +M ++P+ V+ G+LL
Sbjct: 374 SKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLW 433
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
ACR ++ L E + + LV YVLL+NMYAA W G K+R MKG G++K+
Sbjct: 434 ACRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKE 493
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
PG SSIE+ + +HEF+AGDR H S+ IYSMLE ++ LK Y P+T A
Sbjct: 494 PGCSSIEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPKTDA 543
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 143/363 (39%), Gaps = 83/363 (22%)
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y G + +V +F P + WT ++N F AL + +M ++P+ T+
Sbjct: 65 YASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTL 124
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
S+L AC TL +H + +K ++ V L+D Y+R G + A+++F M +
Sbjct: 125 SSLLKAC----TLHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPE 180
Query: 279 RTLVS-------------------------------WNSIIVGFAVNGFVGEALEYFNS- 306
R+LVS WN +I G+A +G EAL +F
Sbjct: 181 RSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKM 240
Query: 307 ------MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI-YRVSPRIEHYGCIV 359
+P+ ++ L++C G +E G ++ +V+ R+ +V
Sbjct: 241 MMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVG--TALV 298
Query: 360 DLYSRAGRLEDALNVVENMP----------------------------------MKPNEV 385
D+Y + G LEDA V + M +KP+++
Sbjct: 299 DMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDI 358
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVD---LDPGVDSNYVLLANMYAAVGKWDGAGKIRR 442
++L AC G + + + D ++P V+ +Y + N+ G+ A + R
Sbjct: 359 TFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVE-HYGCMVNLLGRAGRMQEAYDLVR 417
Query: 443 TMK 445
+M+
Sbjct: 418 SME 420
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 183/425 (43%), Positives = 261/425 (61%), Gaps = 5/425 (1%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
M L G PN +TF L CA F S L G +IH K G D + V TAL+DMYAK
Sbjct: 1 MLLKGCPPNELTFTFLFPACASFYS--LLHGKVIHTHFIKSGFDFD-VYALTALVDMYAK 57
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
G + LA VFD M V+ TWN++I GY R GD+E A+ +F MP R +SWT +++G+
Sbjct: 58 LGVLMLARQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGY 117
Query: 191 VKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
+ G + +ALE F +M+ V P+ VTI SV +ACA +G L +G I Y N
Sbjct: 118 SQNGMYTKALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKN 177
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKR-TLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
+ V NTL+++Y+RCG I+ AR VF + KR L SWNS+++G AV+G EAL+ ++ M
Sbjct: 178 LYVSNTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQML 237
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
EG +PD V+F G + AC+H GL+ G + F M+ + + P++EHYGC+VDL RAG L
Sbjct: 238 GEGIEPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGEL 297
Query: 369 EDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMY 428
++A ++V++MPMKP+ V+ G+LL AC ++ AE + L ++P NYV+L N+Y
Sbjct: 298 QEAYDLVKSMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIY 357
Query: 429 AAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
A+ +WDG K+R+ MKG I K G S IE IH+F+ D+SH IY++L +S
Sbjct: 358 ASAQRWDGVAKLRKLMKGGQITKAAGYSVIEGEGEIHKFIVEDKSHPRHYEIYALLNEIS 417
Query: 489 FDLKL 493
+KL
Sbjct: 418 TKMKL 422
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 178/451 (39%), Positives = 268/451 (59%), Gaps = 16/451 (3%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W IS + + R +A F RM G P+ T ++ LS C L LG I
Sbjct: 204 ISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKR--LELGKKI 261
Query: 105 HGLVCKLGLDRNNV----MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
H V R+NV ++G ALLDMY K G + +A VF+ M K+ W M+ GY
Sbjct: 262 HHYV------RDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYA 315
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G++E A +F+ P+RD + WTA++NG+V+ F+EA+ FREMQI V+PD ++S
Sbjct: 316 NCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVS 375
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+L CA G + G WIH ++ + + V LI++Y++CG IE A ++F + +
Sbjct: 376 LLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKD 435
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
SW SII G A+NG +ALE F+ M++ G +PD ++F G L+ACSH GL+E+G ++F+
Sbjct: 436 TASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFN 495
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL---GSLLAACRTK 397
M+ Y++ P++EHYGC+VDL RAG L +A +++ +P + + + GSLL+ACR
Sbjct: 496 SMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIY 555
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G++ + ER+ K LV + S + LLAN+YA +W+ K+RR MK G++K PG SS
Sbjct: 556 GNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSS 615
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
IE+ S IHEF +G SH E IY ML +++
Sbjct: 616 IEVDSIIHEFFSGHPSHPEMREIYYMLNIMA 646
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 133/269 (49%), Gaps = 42/269 (15%)
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ- 207
++ N++ID Y + + +FDEMP RD ISW +++G+VK FE+A+ F MQ
Sbjct: 172 TYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQE 231
Query: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK----VCNTLIDLYSRC 263
SG+ PD T++S L+AC + L +G IH YV +DNVK + N L+D+Y +C
Sbjct: 232 ESGLMPDEATVVSTLSACTALKRLELGKKIHHYV-----RDNVKFTPIIGNALLDMYCKC 286
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFA--------------------------VNGFV 297
GC+ AR VF+ M + ++ W +++ G+A +NG+V
Sbjct: 287 GCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYV 346
Query: 298 -----GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
EA+ F MQ KPD LT C+ G IE G + + + R+
Sbjct: 347 QFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDE-NRIPIDA 405
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMK 381
++++Y++ G +E AL + + +K
Sbjct: 406 VVGTALIEMYAKCGFIEKALEIFYGLRVK 434
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 161/351 (45%), Gaps = 22/351 (6%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G++ A +MF + + + ++ F K+G ++ L F +++ G+ PD T V
Sbjct: 85 GNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVF 144
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
A +G + + V K + + V N+LID+Y++ + + +F M R ++
Sbjct: 145 KAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVI 204
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKE-GFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
SWN +I G+ +A+ F MQ+E G PD + L+AC+ +E G +
Sbjct: 205 SWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHY 264
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
++ + +P I + ++D+Y + G L A V E MP K N + ++++ G++
Sbjct: 265 VRDNVKFTPIIGN--ALLDMYCKCGCLSIARAVFEEMPSK-NVICWTTMVSGYANCGELE 321
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL------ 455
A L + D + + + N Y ++D A + R M+ R ++ +
Sbjct: 322 EARELFEGSPIRDVVI---WTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLT 378
Query: 456 -----SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
+IE G IHEF+ +R I++ +++E+ + CG++ + +
Sbjct: 379 GCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYA----KCGFIEKAL 425
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 43/242 (17%)
Query: 40 STVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
S + V WT+ I+ + + R EA F M + P+ ++LL+GCA + +
Sbjct: 330 SPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQ--TGAIE 387
Query: 100 LGAMIHGLVCKLGLDRNNV----MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAM 155
G IH + D N + +VGTAL++MYAK G ++ A +F +RVK + +W ++
Sbjct: 388 QGKWIHEFI-----DENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSI 442
Query: 156 IDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
I G G +ALE F +M+ +GV PD
Sbjct: 443 ICGLAMNGKT-------------------------------SKALELFSKMKQAGVRPDD 471
Query: 216 VTIISVLNACANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+T I VL+AC++ G + G + + ++ K V+ L+DL R G + A ++ +
Sbjct: 472 ITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIK 531
Query: 275 RM 276
++
Sbjct: 532 KI 533
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 181/457 (39%), Positives = 279/457 (61%), Gaps = 20/457 (4%)
Query: 62 AEAALEFTRMTLHG-TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMV 120
+EA + F+ M G PN TF ++L CA + L G IHGL+ K G + ++
Sbjct: 103 SEALMLFSAMLCDGRVKPNRFTFPSVLKACAR--ASRLREGKQIHGLIVKFGFHEDEFVI 160
Query: 121 GTALLDMYAKFGRMDLATVVF---------------DAMRVKSSFT-WNAMIDGYMRRGD 164
L+ MY M+ A +F D + + WN MIDG +R GD
Sbjct: 161 SN-LVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGD 219
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+SA +FDEMP R +SW +++G+ + G+F EA+ F+EMQ S ++P+YVT++SVL A
Sbjct: 220 IKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPA 279
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
A +G L +G WIH Y K + + + + L+D+YS+CG I+ A QVF+ + KR ++W
Sbjct: 280 IARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITW 339
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++II FA++G +A+ +F+ M K G P+ V++ G L+ACSHAGL+E+G +F M K
Sbjct: 340 SAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVK 399
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ + PRIEHYGC+VDL RAG LE+A ++ NMP++P++V+ +LL AC+ ++ + E
Sbjct: 400 VVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGE 459
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
R+ + L++L P +YV L+N+YA++G W+ ++R MKG I+K PG S IEI I
Sbjct: 460 RVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGII 519
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
HEF+ D SH +++ I +ML +S L+ GY P T+
Sbjct: 520 HEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTL 556
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 121/298 (40%), Gaps = 56/298 (18%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRG---YFEEALECFREMQISG-VEPDYVTII 219
DI+ A +F +MP + W +L + EAL F M G V+P+ T
Sbjct: 67 DIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFP 126
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKD------------------------------- 248
SVL ACA L G IH ++K F +
Sbjct: 127 SVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVD 186
Query: 249 ----------------NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
NV + N +ID R G I+ A+ +F M R++VSWN +I G+A
Sbjct: 187 FDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYA 246
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
NG EA+ F MQ P+ V+ L A + G +E G ++ + +V
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELG-KWIHLYAGKNKVEIDD 305
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG---DIILAERLM 407
+VD+YS+ G ++ AL V E +P K N + +++ A G D I+ LM
Sbjct: 306 VLGSALVDMYSKCGSIDKALQVFETLP-KRNAITWSAIIGAFAMHGRAEDAIIHFHLM 362
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 35/233 (15%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W IS + ++G EA F M +PN++T +++L A + L LG I
Sbjct: 235 VVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGA--LELGKWI 292
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H K ++ ++V+ G+AL+DMY+K G +D A VF+ + +++ TW+A+I
Sbjct: 293 HLYAGKNKVEIDDVL-GSALVDMYSKCGSIDKALQVFETLPKRNAITWSAII-------- 343
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
F G E+A+ F M +GV P+ V I +L+A
Sbjct: 344 -----------------------GAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSA 380
Query: 225 CANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
C++ G + G +++K + ++ ++DL R G +E A ++ + M
Sbjct: 381 CSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNM 433
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 86/220 (39%), Gaps = 23/220 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD---FPSQCLFLG 101
+ W++ I GR +A + F M G PN + +I +LS C+ F
Sbjct: 336 AITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFS 395
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDGYM 160
M+ + + ++ MV D+ + G ++ A + M ++ W A++
Sbjct: 396 HMVKVVGLQPRIEHYGCMV-----DLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACK 450
Query: 161 RRGDIESAVRMFD---EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
+++ R+ + E+ D+ S+ AL N + G +E +M+ + D
Sbjct: 451 MHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKD--- 507
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
C+ + GI IH ++++ D K ++
Sbjct: 508 -----PGCSWIEIHGI---IHEFLVEDDSHSKAKEIQAML 539
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 173/453 (38%), Positives = 273/453 (60%), Gaps = 34/453 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I + + + EA F RM + G PN IT +++L CA + L G IHG
Sbjct: 290 WNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFA--LEQGQQIHGY 347
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ G + N+V VG AL++MYAK G++ S
Sbjct: 348 AIRSGFESNDV-VGNALVNMYAKC-------------------------------GNVNS 375
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++F+ MP ++ ++W A+++G+ + G+ EAL F EMQ G++PD I+SVL ACA+
Sbjct: 376 AYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAH 435
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
L G IH Y ++ F+ NV V L+D+Y++CG + A+++F+RM ++ +VSW ++
Sbjct: 436 FLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTM 495
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I+ + ++G +AL F+ MQ+ G K D ++FT LTACSHAGL++ GL+YF MK Y
Sbjct: 496 ILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYG 555
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
++P++EHY C+VDL RAG L++A +++NM ++P+ V G+LL ACR +I L E+
Sbjct: 556 LAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAA 615
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
K+L +LDP YVLL+N+YA +W+ K+R+ MK +G++K+PG S + + + F
Sbjct: 616 KHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTF 675
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ GDR+H +SE IY+MLE+L ++ GYVP T
Sbjct: 676 LVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNT 708
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 176/335 (52%), Gaps = 35/335 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I+ + ++G+ EA F+ M ++G PN T ++++ CA + L G I
Sbjct: 186 VVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLA--LEQGKQI 243
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + G++ ++V+V L++MYAK G +
Sbjct: 244 HCYAIRSGIE-SDVLVVNGLVNMYAKCG-------------------------------N 271
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ +A ++F+ MP+RD SW A++ G+ EAL F MQ+ G++P+ +T++SVL A
Sbjct: 272 VNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPA 331
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++ L G IH Y ++ F+ N V N L+++Y++CG + A ++F+RM K+ +V+W
Sbjct: 332 CAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAW 391
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+II G++ +G EAL F MQ +G KPD + L AC+H +E G + +
Sbjct: 392 NAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIR 451
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
S + G +VD+Y++ G + A + E MP
Sbjct: 452 SGFESNVVVGTG-LVDIYAKCGNVNTAQKLFERMP 485
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 191/382 (50%), Gaps = 48/382 (12%)
Query: 25 LTTTPQISIQTNNSKSTV----NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNH 80
+ TT ++S N ++ T N V W +I + ++G +A + +M G NP+
Sbjct: 61 VKTTREVSACANQTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDK 120
Query: 81 ITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVV 140
+ F++++ C L G +H + G + ++V+VGTAL MY K G
Sbjct: 121 LVFLSVIKACGSQSD--LQAGRKVHEDIIARGFE-SDVIVGTALASMYTKCG-------- 169
Query: 141 FDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEAL 200
+E+A ++FD MP RD +SW A++ G+ + G EAL
Sbjct: 170 -----------------------SLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEAL 206
Query: 201 ECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLY 260
F EMQ++G++P+ T++SV+ CA++ L G IH Y ++ + +V V N L+++Y
Sbjct: 207 ALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMY 266
Query: 261 SRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT 320
++CG + A ++F+RM R + SWN+II G+++N EAL +FN MQ G KP+ ++
Sbjct: 267 AKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMV 326
Query: 321 GALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY----GCIVDLYSRAGRLEDALNVVE 376
L AC+H +E G + Y + E +V++Y++ G + A + E
Sbjct: 327 SVLPACAHLFALEQGQQIHG-----YAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFE 381
Query: 377 NMPMKPNEVVLGSLLAACRTKG 398
MP K N V ++++ G
Sbjct: 382 RMP-KKNVVAWNAIISGYSQHG 402
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 156/393 (39%), Gaps = 83/393 (21%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + IS + + G EA F M G P+ +++L CA F + L G I
Sbjct: 388 VVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLA--LEQGKQI 445
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + G + +NV+VGT L+D+YAK G ++ A +F+ M + +W MI Y G
Sbjct: 446 HGYTIRSGFE-SNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGH 504
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
E A+ +F +M Q +G + D++ ++L A
Sbjct: 505 GEDALALFSKM-------------------------------QETGTKLDHIAFTAILTA 533
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRMHKRTLV 282
C++ G + GL + +K D+ K+ + L+DL R G ++ A + + M
Sbjct: 534 CSHAGLVDQGLQYFQ-CMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNM------ 586
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+PD + L AC IE G +
Sbjct: 587 ----------------------------SLEPDANVWGALLGACRIHCNIELGEQ---AA 615
Query: 343 KKIYRVSP-RIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG-SLLAACRTKGDI 400
K ++ + P +Y + ++Y+ A R ED + + M K + G S++A R
Sbjct: 616 KHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTF 675
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGK 433
++ +R P + Y +L +Y + K
Sbjct: 676 LVGDR-------THPQSEQIYAMLEILYEQMRK 701
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 181/457 (39%), Positives = 279/457 (61%), Gaps = 20/457 (4%)
Query: 62 AEAALEFTRMTLHG-TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMV 120
+EA + F+ M G PN TF ++L CA + L G IHGL+ K G + ++
Sbjct: 103 SEALMLFSAMLCDGRVKPNRFTFPSVLKACAR--ASRLREGKQIHGLIVKFGFHEDEFVI 160
Query: 121 GTALLDMYAKFGRMDLATVVF---------------DAMRVKSSFT-WNAMIDGYMRRGD 164
L+ MY M+ A +F D + + WN MIDG +R GD
Sbjct: 161 SN-LVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGD 219
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+SA +FDEMP R +SW +++G+ + G+F EA+ F+EMQ S ++P+YVT++SVL A
Sbjct: 220 IKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPA 279
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
A +G L +G WIH Y K + + + + L+D+YS+CG I+ A QVF+ + KR ++W
Sbjct: 280 IARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITW 339
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++II FA++G +A+ +F+ M K G P+ V++ G L+ACSHAGL+E+G +F M K
Sbjct: 340 SAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVK 399
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ + PRIEHYGC+VDL RAG LE+A ++ NMP++P++V+ +LL AC+ ++ + E
Sbjct: 400 VVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGE 459
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
R+ + L++L P +YV L+N+YA++G W+ ++R MKG I+K PG S IEI I
Sbjct: 460 RVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGII 519
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
HEF+ D SH +++ I +ML +S L+ GY P T+
Sbjct: 520 HEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTL 556
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRG---YFEEALECFREMQISG-VEPDYVTII 219
DI+ A +F +MP + W +L + EAL F M G V+P+ T
Sbjct: 67 DIDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFP 126
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKD------------------------------- 248
SVL ACA L G IH ++K F +
Sbjct: 127 SVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVD 186
Query: 249 ----------------NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
NV + N +ID R G I+ A+ +F M +R++VSWN +I G+A
Sbjct: 187 FDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYA 246
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
NG EA+ F MQ P+ V+ L A + G +E G ++ + ++
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELG-KWIHLYAGKNKIEIDD 305
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG---DIILAERLM 407
+VD+YS+ G +++AL V E +P K N + +++ A G D I+ LM
Sbjct: 306 VLGSALVDMYSKCGSIDEALQVFETLP-KRNAITWSAIIGAFAMHGRAEDAIIHFHLM 362
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 35/233 (15%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W IS + ++G EA F M +PN++T +++L A + L LG I
Sbjct: 235 VVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGA--LELGKWI 292
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H K ++ ++V+ G+AL+DMY+K G +D A VF+ + +++ TW+A+I
Sbjct: 293 HLYAGKNKIEIDDVL-GSALVDMYSKCGSIDEALQVFETLPKRNAITWSAII-------- 343
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
F G E+A+ F M +GV P+ V I +L+A
Sbjct: 344 -----------------------GAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSA 380
Query: 225 CANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
C++ G + G +++K + ++ ++DL R G +E A ++ + M
Sbjct: 381 CSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNM 433
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 86/220 (39%), Gaps = 23/220 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD---FPSQCLFLG 101
+ W++ I GR +A + F M G PN + +I +LS C+ F
Sbjct: 336 AITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFS 395
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDGYM 160
M+ + + ++ MV D+ + G ++ A + M ++ W A++
Sbjct: 396 HMVKVVGLQPRIEHYGCMV-----DLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACK 450
Query: 161 RRGDIESAVRMFD---EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
+++ R+ + E+ D+ S+ AL N + G +E +M+ + D
Sbjct: 451 MHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKD--- 507
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
C+ + GI IH ++++ D K ++
Sbjct: 508 -----PGCSWIEIHGI---IHEFLVEDDSHSKAKEIQAML 539
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 176/464 (37%), Positives = 281/464 (60%), Gaps = 37/464 (7%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
E + + +M G P++ T +L CA+ S+ + G +HG K+GL ++V V
Sbjct: 123 EGLVVYKQMLSKGIVPDNYTIPFVLKACAE--SRAVREGEEVHGQAIKMGL-ASDVYVSN 179
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTW------------------------------ 152
L+ MYA + A VFD + +W
Sbjct: 180 TLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLD 239
Query: 153 ----NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
NA++D Y++ GD A ++F EMPV++ +SW ++++G ++G F+E+L FR+MQ
Sbjct: 240 VFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQR 299
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
GV+PD VT+++VLN+CAN+G L +G W+H Y+ + + + + N L+D+Y++CG I+
Sbjct: 300 LGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQ 359
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
A VFQ M+++ + S+ ++IVG A++G G+AL+ F+ M K G +PD V+F G LTACSH
Sbjct: 360 ACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSH 419
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
GL+E+G +YF+ M IY + P++EHYGC+VDL RAG + +A + NMP++P+ VLG
Sbjct: 420 VGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLG 479
Query: 389 SLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
+LL AC+ G + L E +MK + ++P D YVL++N+Y++ +W A K+R+TMK R
Sbjct: 480 ALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERN 539
Query: 449 IQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
++K PG SSIE+ IHEF GD+SH + + IY +L+ + LK
Sbjct: 540 LEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLK 583
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 145/342 (42%), Gaps = 79/342 (23%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W S IS + G+ E+ F +M G P+ +T + +L+ CA+ L LG
Sbjct: 268 VKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANL--GVLELG 325
Query: 102 AMIHGLVCKLGLDRNNV----MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
+H LDRN + +G AL+DMYAK G +D A VF AM K +++ AMI
Sbjct: 326 KWVHAY-----LDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIV 380
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
G G A+ +F EMP G+EPD VT
Sbjct: 381 GLAMHGQGGKALDLFSEMPKM-------------------------------GIEPDEVT 409
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+ VL AC++VG + G ++ F+D + N L GC+
Sbjct: 410 FVGVLTACSHVGLVEEG--------RKYFEDMSTIYNLRPQL-EHYGCM----------- 449
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
++G A G + EA E+ +M E PD L AC G +E G
Sbjct: 450 --------VDLLGRA--GLINEAEEFIRNMPIE---PDAFVLGALLGACKIHGKVELG-- 494
Query: 338 YFDIMKKIYRVSPRIE-HYGCIVDLYSRAGRLEDALNVVENM 378
+MKKI ++ PR + Y + ++YS A R DAL + + M
Sbjct: 495 -ESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTM 535
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 175/456 (38%), Positives = 275/456 (60%), Gaps = 5/456 (1%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT--NPNHITFITLLSGCADFPSQ 96
+S V V W + I + R G AEA F RM P+ +T I +SGC
Sbjct: 185 RSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRD- 243
Query: 97 CLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMI 156
L LG +HG V G+ V + AL+DMY K G +++A VF+ + ++ +W MI
Sbjct: 244 -LELGRRLHGFVDSDGVS-CTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMI 301
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
G+ + G ++ A ++FDEMP RD W AL+ G+V+ +EAL F EMQ + V PD +
Sbjct: 302 VGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEI 361
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T++++L AC+ +G L +G+W+HRY+ K +V + +LID+Y++CG IE A +F+ +
Sbjct: 362 TMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEI 421
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
++ ++W ++I G A +G EA+E+F +M + G KPD ++F G L+AC HAGL+++G
Sbjct: 422 PEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGR 481
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+F +M+ Y + +++HY C++DL RAG L++A +V MPM+P+ VV G++ ACR
Sbjct: 482 EFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRM 541
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
+G+I L E+ LV++DP YVLLANMYA A K+R M+ G++K PG S
Sbjct: 542 QGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAMMRHLGVEKVPGCS 601
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
IE+ +HEF+ D+SH++S IY L ++ +K
Sbjct: 602 CIELNGVVHEFIVKDKSHMDSHAIYDCLHEITLQIK 637
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 160/342 (46%), Gaps = 74/342 (21%)
Query: 76 TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMD 135
P+H+TF LL CA A+ H V +LGLD +
Sbjct: 121 ARPDHLTFPFLLKACARLREWGYGDAALAH--VLRLGLDSD------------------- 159
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
F NA RG +E A R+FD PVRD +SW L+ G+V+RG
Sbjct: 160 -------------VFVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGN 206
Query: 196 FEEALECFREM--QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
EALE F M + + V PD VT+I+ ++ C + L +G +H +V V++
Sbjct: 207 PAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLM 266
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA--------------------- 292
N L+D+Y +CG +E A+ VF+R+ RT+VSW ++IVGFA
Sbjct: 267 NALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVF 326
Query: 293 -----VNGFV-----GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL---RYF 339
+ G+V EAL F+ MQ+ PD ++ LTACS G +E G+ RY
Sbjct: 327 PWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYI 386
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ + ++ V+ ++D+Y++ G +E A+++ + +P K
Sbjct: 387 EKHRLVFSVALGTS----LIDMYAKCGNIEKAIHIFKEIPEK 424
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 88/188 (46%), Gaps = 4/188 (2%)
Query: 194 GYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
G L +R + SG PD++T +L ACA + G G +VL+ +V V
Sbjct: 103 GVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFV 162
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG- 311
N S G +E AR++F R R LVSWN++I G+ G EALE F M E
Sbjct: 163 VNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDA 222
Query: 312 -FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
+PD V+ A++ C +E G R + VS + ++D+Y + G LE
Sbjct: 223 VVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDS-DGVSCTVRLMNALMDMYIKCGSLEM 281
Query: 371 ALNVVENM 378
A +V E +
Sbjct: 282 AKSVFERI 289
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/464 (39%), Positives = 282/464 (60%), Gaps = 4/464 (0%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
S++ V + WTS I+ + R+ R EA F M HG P+ +T I +LS CA
Sbjct: 197 SQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKD-- 254
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM-RVKSSFTWNAMI 156
L LG +H LV + G+ + +V AL+DMYAK G A VFDA+ R +WNA+I
Sbjct: 255 LELGRSLHLLVEEKGMPTSENLV-VALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAII 313
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
DGY + G ++ A +FDEM VRD I++ +++ G++ G EAL F M+ + D
Sbjct: 314 DGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNF 373
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T++++L ACA++G L G +H + ++ + ++ + L+D+Y +CG ++ A VFQRM
Sbjct: 374 TVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRM 433
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
KR + +W ++I G A NG ALE+F M+ +GF+P+ VS+ LTACSH+ L+ +G
Sbjct: 434 GKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGR 493
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
YFD M+ +Y + P+IEHYGC++DL R+G L++A+++V+ MP++PN V+ S+L+ACR
Sbjct: 494 LYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRV 553
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
I LA+ ++L+ L+P D YV L N+Y +W+ A KIR M+ R ++K G S
Sbjct: 554 HKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYS 613
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
SI + +H+F+ D+SH I +MLE +S LK GY P T
Sbjct: 614 SITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLT 657
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 161/347 (46%), Gaps = 36/347 (10%)
Query: 66 LEFTRMTLHGTNPNHITFITLLSGCADFPSQ--CLFLGAMIHGLVCKLGLDRNNVMVGTA 123
L F RM G P+ TF L C+ S+ L L M+H + L V +
Sbjct: 89 LLFRRMRRAGVRPDGFTF-HFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNS 147
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
L+ MY + G A FD + VK + W +I G + G + + + PVRD ISW
Sbjct: 148 LIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISW 207
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
T+L+ + + EA+ CF+ M G+ PD VT+I+VL+ACA + L +G +H V +
Sbjct: 208 TSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEE 267
Query: 244 QDFKDNVKVCNTLIDLYSRCG----------------------------C----IEFARQ 271
+ + + LID+Y++CG C ++ AR
Sbjct: 268 KGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARS 327
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
+F M R ++++NS++ G+ +G + EAL F SM++ + D + LTAC+ G
Sbjct: 328 LFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGA 387
Query: 332 IEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
++ G R + V I ++D+Y + GR+++A V + M
Sbjct: 388 LQQG-RALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRM 433
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/458 (39%), Positives = 271/458 (59%), Gaps = 5/458 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHG-TNPNHITFITLLSGCADFPSQCLFLGAM 103
V WT+ + + R G EA F RM + G PN +T + ++S L G M
Sbjct: 207 VVSWTTLVDGYARRGLADEAWRVFCRMVVAGGLQPNEVTLVAVVSAMGQM--GLLAFGRM 264
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
++ V G+ R+ V + AL+DM+ KFG A VFD+M VK ++W M++ Y + G
Sbjct: 265 VYRYVADGGVGRS-VNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCG 323
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+ESA R+FD+MP R+A+SW+ ++ + + EEA+ F+ M GVEP ++SVL+
Sbjct: 324 DLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLS 383
Query: 224 ACANVGTLGIGLWIH-RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
ACA +G L +G WI+ YV+ V + N ID+Y++CG + A ++F M +R +V
Sbjct: 384 ACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAERNVV 443
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWNS+I+ AV+G E L F ++ PD ++F G L+ACSH+GL+ +G RYF M
Sbjct: 444 SWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACSHSGLVSEGRRYFKEM 503
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
K IY + P+ EHY C++DL + G LE+A V + MPM+ +E G+LL ACR G++ +
Sbjct: 504 KLIYGIEPKSEHYACMIDLLGKIGLLEEAFEVAKGMPMETDEAGWGALLNACRMYGNVEI 563
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
E LV L+P YVL++ +YA+ KWD +R M+ RG++K PG SSIE+
Sbjct: 564 GEFAADKLVQLNPLDSGIYVLMSQIYASKNKWDQVKILRVLMRERGVKKNPGCSSIEVDG 623
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF+ D SH+ SE IY+ L+ + F LK GYVP T
Sbjct: 624 KFHEFLVADVSHVHSEDIYAALKNIYFHLKWEGYVPLT 661
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 157/367 (42%), Gaps = 70/367 (19%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+S NA++ Y + A +FDEMP RD +SWT L++G+ +RG +EA F M
Sbjct: 174 QSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRM 233
Query: 207 QIS-GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL------ 259
++ G++P+ VT+++V++A +G L G ++RYV +V + N LID+
Sbjct: 234 VVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGC 293
Query: 260 -------------------------YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
Y++CG +E A ++F M +R VSW+ +I ++
Sbjct: 294 AASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQA 353
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
EA+ F +M +EG +P L+AC+ G ++ G +D + +
Sbjct: 354 NQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNL 413
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMK--------------------------------- 381
+D+Y++ G + A + M +
Sbjct: 414 GNAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCI 473
Query: 382 -PNEVVLGSLLAACRTKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGA 437
P+E+ LL+AC G + R MK + ++P + +Y + ++ +G + A
Sbjct: 474 VPDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSE-HYACMIDLLGKIGLLEEA 532
Query: 438 GKIRRTM 444
++ + M
Sbjct: 533 FEVAKGM 539
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 183/464 (39%), Positives = 282/464 (60%), Gaps = 4/464 (0%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
S++ V + WTS I+ + R+ R EA F M HG P+ +T I +LS CA
Sbjct: 197 SQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKD-- 254
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM-RVKSSFTWNAMI 156
L LG +H LV + G+ + +V AL+DMYAK G A VFDA+ R +WNA+I
Sbjct: 255 LELGRSLHLLVEEKGMPTSENLV-VALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAII 313
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
DGY + G ++ A +FDEM VRD I++ +++ G++ G EAL F M+ + D
Sbjct: 314 DGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNF 373
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T++++L ACA++G L G +H + ++ + ++ + L+D+Y +CG ++ A VFQRM
Sbjct: 374 TVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRM 433
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
KR + +W ++I G A NG ALE+F M+ +GF+P+ VS+ LTACSH+ L+ +G
Sbjct: 434 GKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGR 493
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
YFD M+ +Y + P+IEHYGC++DL R+G L++A+++V+ MP++PN V+ S+L+ACR
Sbjct: 494 LYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRV 553
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
I LA+ ++L+ L+P D YV L N+Y +W+ A KIR M+ R ++K G S
Sbjct: 554 HKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYS 613
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
SI + +H+F+ D+SH I +MLE +S LK GY P T
Sbjct: 614 SITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLT 657
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 161/347 (46%), Gaps = 36/347 (10%)
Query: 66 LEFTRMTLHGTNPNHITFITLLSGCADFPSQ--CLFLGAMIHGLVCKLGLDRNNVMVGTA 123
L F RM G P+ TF L C+ S+ L L M+H + L V +
Sbjct: 89 LLFRRMRRAGVRPDGFTF-HFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNS 147
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
L+ MY + G A FD + VK + W +I G + G + + + PVRD ISW
Sbjct: 148 LIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISW 207
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
T+L+ + + EA+ CF+ M G+ PD VT+I+VL+ACA + L +G +H V +
Sbjct: 208 TSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEE 267
Query: 244 QDFKDNVKVCNTLIDLYSRCG----------------------------C----IEFARQ 271
+ + + LID+Y++CG C ++ AR
Sbjct: 268 KGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARS 327
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
+F M R ++++NS++ G+ +G + EAL F SM++ + D + LTAC+ G
Sbjct: 328 LFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGA 387
Query: 332 IEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
++ G R + V I ++D+Y + GR+++A V + M
Sbjct: 388 LQQG-RALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRM 433
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 181/435 (41%), Positives = 271/435 (62%), Gaps = 7/435 (1%)
Query: 43 NPTV-QWTSSISRHCRSGRIAEAALEFTR-MTL-HGTNPNHITFITLLSGCADFPSQCLF 99
NP V W + I H G A F R ++L NPN + +L+ CA + +
Sbjct: 73 NPNVFSWNAIIKAHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTSLIKACAGL--EAIA 130
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
G +H +V K GLD NN+ +GT+L+DMY KF A VFD M ++ +WN M+ GY
Sbjct: 131 DGLKVHAVVIKSGLD-NNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDVVSWNTMVSGY 189
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTI 218
GD+ESA R+FD+M RD ISW A++ G+V+ G + +A+E F EMQ + GV PD VT+
Sbjct: 190 CLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDDVTL 249
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+SVL+ACA+VG L G WI R+V + N+ + N LID+Y++CG +E AR++F M +
Sbjct: 250 VSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEEARRIFDGMRE 309
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R ++SW+++I G +G EA Y++ M + G KP+ V+F G L+ACSHAGL++ G+
Sbjct: 310 RDVISWSTMICGSGTHGDADEAFGYYSKMLECGVKPNEVTFMGLLSACSHAGLVDKGIEL 369
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M + YR+ P++ HYGC++DL SRAGRL++A +++ +MP++PN +V G+LL CR
Sbjct: 370 FSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVIVWGALLGGCRIHK 429
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
D ER+ ++L++LD +YV +A A+VG+ D A M+ +GI K PG S I
Sbjct: 430 DFRRGERVAQHLLELDSEYTGSYVYIAGAKASVGRVDDAANCWLRMQHKGIIKDPGCSKI 489
Query: 459 EIGSGIHEFMAGDRS 473
E+ + +HEF D +
Sbjct: 490 EVHNTVHEFKECDNT 504
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 165/388 (42%), Gaps = 74/388 (19%)
Query: 79 NHITFITLLSGCADF--PSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
NH+ TLL A+ Q L + A L+ L + ++ L+ A +
Sbjct: 7 NHLKLTTLLLNYAEHFQTKQLLQIQAQ---LITNPPLSLHPNLIAVKLIGACAANANLYH 63
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A ++F + + F+WNA+I + + G +
Sbjct: 64 AQLIFAQLPNPNVFSWNAIIKAH-------------------------------INCGAW 92
Query: 197 EEALECF-REMQI-SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
E AL CF R++ + S P+ S++ ACA + + GL +H V+K +N+ +
Sbjct: 93 EHALNCFNRQLSLPSAPNPNEYIYTSLIKACAGLEAIADGLKVHAVVIKSGLDNNIHLGT 152
Query: 255 TLIDLYSR-------------------------------CGCIEFARQVFQRMHKRTLVS 283
+L+D+Y + CG +E AR+VF +M +R ++S
Sbjct: 153 SLVDMYFKFREPASAGQVFDEMPLRDVVSWNTMVSGYCLCGDLESARRVFDQMLERDVIS 212
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
WN++I G+ NG +A+E F+ MQK G PD V+ L+AC+H G ++ G R+ D
Sbjct: 213 WNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGALDFG-RWIDRF 271
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+ ++D+Y++ G +E+A + + M + + + +++ T GD
Sbjct: 272 VGWRGRGLNLYLGNALIDMYAKCGTMEEARRIFDGMRER-DVISWSTMICGSGTHGDA-- 328
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAA 430
E Y L+ GV N V + +A
Sbjct: 329 DEAFGYYSKMLECGVKPNEVTFMGLLSA 356
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/455 (39%), Positives = 272/455 (59%), Gaps = 3/455 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + +S + ++ + M G P+ +T ++ ++ CA L +G H
Sbjct: 298 VMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGD--LSVGKSSH 355
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + GL+ + + A++DMY K G+ + A VF+ M K+ TWN++I G +R GD+
Sbjct: 356 AYVLRNGLEGWD-NISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDM 414
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A R+FDEM RD +SW ++ V+ FEEA+E FREMQ G+ D VT++ + +AC
Sbjct: 415 ELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASAC 474
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+G L + W+ Y+ K D ++++ L+D++SRCG A VF+RM KR + +W
Sbjct: 475 GYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWT 534
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+ I A+ G A+E FN M ++ KPD V F LTACSH G ++ G + F M+K
Sbjct: 535 AAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKA 594
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ + P I HYGC+VDL RAG LE+A++++++MP++PN+VV GSLLAACR ++ LA
Sbjct: 595 HGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHY 654
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ L L P +VLL+N+YA+ GKW ++R MK +G+QK PG SSIE+ IH
Sbjct: 655 AAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIH 714
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
EF +GD SH E+ HI MLE ++ L GYVP+T
Sbjct: 715 EFTSGDESHAENTHIGLMLEEINCRLSEAGYVPDT 749
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 202/414 (48%), Gaps = 64/414 (15%)
Query: 52 ISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKL 111
I + +G +A L + +M + G P+ TF LLS C+ + L G +HG V K+
Sbjct: 102 IRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILA--LSEGVQVHGAVLKM 159
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
GL+ ++ V +L+ YA+ G++DL ++
Sbjct: 160 GLE-GDIFVSNSLIHFYAECGKVDLGR-------------------------------KL 187
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTL 231
FD M R+ +SWT+L+NG+ R +EA+ F +M +GVEP+ VT++ V++ACA + L
Sbjct: 188 FDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDL 247
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
+G + Y+ + + + + N L+D+Y +CG I ARQ+F + LV +N+I+ +
Sbjct: 248 ELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNY 307
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC-----------SHAGLIEDGLRYFD 340
+ + + L + M ++G +PD V+ + AC SHA ++ +GL +D
Sbjct: 308 VHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWD 367
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+ I+D+Y + G+ E A V E+MP K V SL+A GD+
Sbjct: 368 NISN------------AIIDMYMKCGKREAACKVFEHMPNK-TVVTWNSLIAGLVRDGDM 414
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPG 454
LA R+ +++ D V N ++ A V ++ A ++ R M+ +GI PG
Sbjct: 415 ELAWRIFDEMLERDL-VSWNTMIGA--LVQVSMFEEAIELFREMQNQGI---PG 462
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 156/343 (45%), Gaps = 41/343 (11%)
Query: 147 KSSFTWNAMIDGYMRRGDIES---AVRMF--DEMPVRDAISWTALLNGFVKRGYFEEALE 201
K + N +I ++ G +ES A F D+ + + L+ G+ G ++A+
Sbjct: 57 KPASNLNKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAIL 116
Query: 202 CFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
+ +M + G+ PD T +L+AC+ + L G+ +H VLK + ++ V N+LI Y+
Sbjct: 117 LYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYA 176
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
CG ++ R++F M +R +VSW S+I G++ EA+ F M + G +P+ V+
Sbjct: 177 ECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVC 236
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL------------- 368
++AC+ +E G + + ++ I +VD+Y + G +
Sbjct: 237 VISACAKLKDLELGKKVCSYISELGMELSTI-MVNALVDMYMKCGDICAARQIFDECANK 295
Query: 369 ------------------EDALNVVENMPMK---PNEVVLGSLLAACRTKGDIILAERLM 407
D L +++ M K P++V + S +AAC GD+ + +
Sbjct: 296 NLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSH 355
Query: 408 KYLV-DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
Y++ + G D+ + +MY GK + A K+ M + +
Sbjct: 356 AYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTV 398
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 176/450 (39%), Positives = 271/450 (60%), Gaps = 5/450 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V WT+ + + R+G EA F RM + G PN +T + +S L G M
Sbjct: 209 VVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQM--GLLAFGIM 266
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H V + G+ R+ V + AL+DM+ K G + A VFD M VK ++W +M++ Y + G
Sbjct: 267 LHKYVTEGGVARS-VNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCG 325
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+ESA ++F +MP R+ +SW+ ++ + + EEA+ FREM +GV+P T++SVL+
Sbjct: 326 DLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLS 385
Query: 224 ACANVGTLGIGLWIHR-YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
ACA +G L +G WI+ Y++ V + N LID++++CG + A ++F M +R +V
Sbjct: 386 ACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVV 445
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN++I+ AV+G EA+ F ++ E PD ++F G L +CSH+GL+ +G RYF M
Sbjct: 446 SWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEM 505
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+ YR+ PR+EHY C++DL + G LE+A V MPM+ +E G+LL ACR G++ +
Sbjct: 506 EMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEI 565
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
+ LV+LDP YVL++ +YA+ KWD +R TM+ RG++K PG SSIE+
Sbjct: 566 GACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRGVKKNPGCSSIEVEG 625
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
H+F+ D SH SE IYS L+ + F LK
Sbjct: 626 KFHDFLVADVSHACSEEIYSALKNIYFHLK 655
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 165/412 (40%), Gaps = 99/412 (24%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G IH K G +V+VG AL+ YA +D A VFD M + +W ++DGY
Sbjct: 161 GEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYA 220
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R G + A R+F M V + G+ P+ VT+++
Sbjct: 221 RAGLADEAWRLFCRMVV------------------------------VGGMRPNAVTLVA 250
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR---------- 270
++A +G L G+ +H+YV + +V + N L+D++ +CGC+ +AR
Sbjct: 251 AVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKD 310
Query: 271 ---------------------QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
Q+F+ M +R +VSW+ +I ++ EA+ F M
Sbjct: 311 VYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIA 370
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
G P + L+AC+ G ++ G ++ ++ + ++D++++ G +
Sbjct: 371 AGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVG 430
Query: 370 DALNVVENMPMK----------------------------------PNEVVLGSLLAACR 395
+A + + M + P+++ LLA+C
Sbjct: 431 EASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCS 490
Query: 396 TKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
G + R M+ ++P V+ +Y + ++ VG + A ++ R M
Sbjct: 491 HSGLVSEGRRYFKEMEMFYRIEPRVE-HYACMIDLLGKVGLLEEAFEVARGM 541
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 179/465 (38%), Positives = 271/465 (58%), Gaps = 7/465 (1%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
+KS V V W S I+ + G EA + M PN IT I ++S C+ Q
Sbjct: 217 NKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQV--QD 274
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L LG H + + GL+ + + AL+DMY K G + A V+FD M K+ +W M+
Sbjct: 275 LNLGKEFHCYIKEHGLEFT-IPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVL 333
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GY R G ++ A + ++P + + W A+++G V+ +EAL F EMQI +EPD VT
Sbjct: 334 GYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVT 393
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+++ L+AC+ +G L +G+WIH Y+ + +V + L+D+Y++CG I A QVF+ +
Sbjct: 394 MVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIP 453
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+R ++W ++I G A++G +AL YF+ M G PD ++F G L+AC H GL+E+G +
Sbjct: 454 QRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRK 513
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF M + VSP+++HY C+VDL RAG LE+A +V+NMPM + VLG+L ACR
Sbjct: 514 YFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVY 573
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G++ + ER L+++DP NYVLLA+MY+ W A R+ M +G++K PG S
Sbjct: 574 GNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSL 633
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC----GYVP 498
+EI +HEF+ D SH +SE IY L L+ L + GY P
Sbjct: 634 VEINGIVHEFVVRDVSHPQSEWIYECLVTLTKQLDVIVRKHGYFP 678
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 175/366 (47%), Gaps = 67/366 (18%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMIHG 106
W ++I + SG I + + RM L GT P++ T+ LL GC S CL LG + H
Sbjct: 125 WNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHV 184
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
L KFG F+ F NA I + G++
Sbjct: 185 L----------------------KFG--------FEC----DIFVHNASITMLLSCGELS 210
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A +F++ VRD ++W +++ G VKRG EA++ ++EM+ V P+ +T+I ++++C+
Sbjct: 211 VAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCS 270
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
V L +G H Y+ + + + + N L+D+Y +CG + AR +F M ++TLVSW +
Sbjct: 271 QVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTT 330
Query: 287 IIVGFAVNGFVG-------------------------------EALEYFNSMQKEGFKPD 315
+++G+A GF+ EAL F+ MQ +PD
Sbjct: 331 MVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPD 390
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V+ L+ACS G ++ G+ +++ +++S + +VD+Y++ G + AL V
Sbjct: 391 KVTMVNCLSACSQLGALDVGIWIHHYIER-HKLSIDVALGTALVDMYAKCGNIARALQVF 449
Query: 376 ENMPMK 381
E +P +
Sbjct: 450 EEIPQR 455
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 2/219 (0%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVL 222
+++ R+ + + SW A + G+V+ G E ++ M + G ++PD T +L
Sbjct: 106 ELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLL 165
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
C + +GL + +VLK F+ ++ V N I + CG + A VF + R LV
Sbjct: 166 KGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLV 225
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+WNS+I G G EA++ + M+ E +P+ ++ G +++CS + G + F
Sbjct: 226 TWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLG-KEFHCY 284
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
K + + I ++D+Y + G L A + +NM K
Sbjct: 285 IKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQK 323
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 180/462 (38%), Positives = 281/462 (60%), Gaps = 13/462 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S ++ + G +A F RM G +PN +T ++++S CA + L LG
Sbjct: 309 VSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACA--KTMNLTLGRK-- 364
Query: 106 GLVCKLGLDRNNVM----VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
VC +DRN +M V A +DM+ K G +++A +FD M + +W +IDGY +
Sbjct: 365 --VCDY-IDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAK 421
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI--SGVEPDYVTII 219
+ A +FD MP +D +W L++G+ + G +EAL FRE+Q+ SG PD VT++
Sbjct: 422 MSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLL 481
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
S L+ACA +G + IG WIH Y+ K+ + N + +LID+YS+ G +E A +VF + +
Sbjct: 482 STLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNK 541
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+ W+++I G A++G A+E F MQ+ KP+ V+FT L ACSH+GL+++G R F
Sbjct: 542 DVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLF 601
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
D M+++Y V P+ +HY C+VD+ RAG LE+AL +E MP+ P+ V G+LL AC G+
Sbjct: 602 DEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGN 661
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ LAE+ L++++PG YVLL+N+YA G W+G ++R+ M+ G++K+ G SSIE
Sbjct: 662 LELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIE 721
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
I +HEF+ GD +H S IY+ L+ + L+ GYV T+
Sbjct: 722 IDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTL 763
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 187/428 (43%), Gaps = 103/428 (24%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGT--NPNHITFITLLSGCADFPSQCLFLGAMIH 105
W I S ++ L F RM LH + PN TF L+ A+ +C +G +H
Sbjct: 207 WNILIRALATSSDPIQSVLVFIRM-LHDSPFGPNKFTFPVLIKAVAE--RRCFLVGKAVH 263
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G+ K ++V V +L+ YA G +DLA +VF+ MI+G +
Sbjct: 264 GMAIKTSFG-DDVFVLNSLIHFYASCGHLDLAYLVFE------------MIEGNNK---- 306
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
D +SW +++ GFV+ GY ++AL+ F M+ GV P+ VT++SV++AC
Sbjct: 307 -------------DIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSAC 353
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A L +G + Y+ + + N+ VCN ID++ +CG +E AR +F M KR +VSW
Sbjct: 354 AKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWT 413
Query: 286 SIIVGFA-------------------------------VNGFVGEALEYFNSMQ--KEGF 312
+II G+A +G EAL F +Q K G
Sbjct: 414 TIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGA 473
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
+PD V+ L+AC+ G ++ G +KK R+ ++D+YS++G +E A+
Sbjct: 474 RPDQVTLLSTLSACAQLGAMDIGEWIHGYIKK-ERIQLNRNLATSLIDMYSKSGDVEKAI 532
Query: 373 NV----------------------------------VENMPMKPNEVVLGSLLAACRTKG 398
V ++ +KPN V +LL AC G
Sbjct: 533 EVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSG 592
Query: 399 DIILAERL 406
+ +RL
Sbjct: 593 LVDEGKRL 600
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 148/355 (41%), Gaps = 70/355 (19%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRG-YFEEALECFREMQISGVEPDYVTIISVLN 223
++ A ++FD++P + SW L+ + L R + S P+ T ++
Sbjct: 189 LDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIK 248
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM--HKRTL 281
A A +G +H +K F D+V V N+LI Y+ CG ++ A VF+ + + + +
Sbjct: 249 AVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDI 308
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA------------ 329
VSWNS++ GF G+ +AL+ F M+ EG P+ V+ ++AC+
Sbjct: 309 VSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDY 368
Query: 330 -----------------------GLIEDGLRYFDIMKK---------------------- 344
G +E FD M+K
Sbjct: 369 IDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIA 428
Query: 345 --IYRVSPR--IEHYGCIVDLYSRAGRLEDALNVVENMPM-----KPNEVVLGSLLAACR 395
I+ PR I + ++ Y ++GR ++AL + + + +P++V L S L+AC
Sbjct: 429 RDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACA 488
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVL-LANMYAAVGKWDGAGKIRRTMKGRGI 449
G + + E + Y+ ++ N L +MY+ G + A ++ ++ + +
Sbjct: 489 QLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDV 543
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 175/456 (38%), Positives = 269/456 (58%), Gaps = 3/456 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W I + ++ + M GT P+ I T+LS CA + L G I
Sbjct: 182 VVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAH--AGNLSYGKAI 239
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + G R + T+L++MYA G M LA V+D + K AM+ GY + G
Sbjct: 240 HQFIKDNGF-RVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGM 298
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ A +FD M +D + W+A+++G+ + EAL+ F EMQ + PD +T++SV++A
Sbjct: 299 VQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISA 358
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CANVG L WIH Y K F + + N LID+Y++CG + AR+VF+ M ++ ++SW
Sbjct: 359 CANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISW 418
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+S+I FA++G A+ F+ M+++ +P+GV+F G L ACSHAGL+E+G ++F M
Sbjct: 419 SSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMIN 478
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+R+SP+ EHYGC+VDLY RA L A+ ++E MP PN ++ GSL++AC+ G+I L E
Sbjct: 479 EHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGE 538
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
L++L+P D V+L+N+YA +WD G +R+ MK +G+ K+ S IE+ + +
Sbjct: 539 FAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEV 598
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
H FM DR H +S+ IY L+ + LKL GY P T
Sbjct: 599 HVFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPST 634
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 171/389 (43%), Gaps = 67/389 (17%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP ++++ + R G E L + + +G + +F LL + + L LG
Sbjct: 77 NPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSA--LNLG 134
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHGL K G + + +AL+ MYA GR+ A +FD M + TWN MIDGY
Sbjct: 135 LEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGY-- 192
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+ +++ L+ + EM+ SG EPD + + +V
Sbjct: 193 -----------------------------SQNAHYDHVLKLYEEMKTSGTEPDAIILCTV 223
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV--------- 272
L+ACA+ G L G IH+++ F+ + +L+++Y+ CG + AR+V
Sbjct: 224 LSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHM 283
Query: 273 ----------------------FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
F RM ++ LV W+++I G+A + EAL+ FN MQ+
Sbjct: 284 VVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRR 343
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
PD ++ ++AC++ G + ++ + ++D+Y++ G L
Sbjct: 344 RIVPDQITMLSVISACANVGALVQA-KWIHTYADKNGFGRTLPINNALIDMYAKCGNLVK 402
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGD 399
A V ENMP K N + S++ A GD
Sbjct: 403 AREVFENMPRK-NVISWSSMINAFAMHGD 430
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 174/454 (38%), Positives = 276/454 (60%), Gaps = 8/454 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I+ ++G EA F M P+ +T +++S CA + + +G +
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA--IKVGQEV 275
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG V K RN++++ A +DMYAK R+ A +FD+M +++ +MI GY
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 335
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++A MF +M R+ +SW AL+ G+ + G EEAL F ++ V P + + ++L A
Sbjct: 336 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKA 395
Query: 225 CANVGTLGIGLWIHRYVLKQDFK------DNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
CA++ L +G+ H +VLK FK D++ V N+LID+Y +CGC+E VF++M +
Sbjct: 396 CADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME 455
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R VSWN++I+GFA NG+ EALE F M + G KPD ++ G L+AC HAG +E+G Y
Sbjct: 456 RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHY 515
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M + + V+P +HY C+VDL RAG LE+A +++E MPM+P+ V+ GSLLAAC+
Sbjct: 516 FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHR 575
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
+I L + + + L++++P YVLL+NMYA +GKW+ +R++M+ G+ K+PG S I
Sbjct: 576 NITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 635
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+I H FM D+SH + I+S+L++L +++
Sbjct: 636 KIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 158/299 (52%), Gaps = 2/299 (0%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
F LL C +++ +H V K G N + + L+D Y+K G ++ VFD
Sbjct: 22 FAKLLDSCIKSKLSAIYV-RYVHASVIKSGFS-NEIFIQNRLIDAYSKCGSLEDGRQVFD 79
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
M ++ +TWN+++ G + G ++ A +F MP RD +W ++++GF + EEAL
Sbjct: 80 KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
F M G + + SVL+AC+ + + G+ +H + K F +V + + L+D+YS+
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 199
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
CG + A++VF M R +VSWNS+I F NG EAL+ F M + +PD V+
Sbjct: 200 CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
++AC+ I+ G + K ++ I VD+Y++ R+++A + ++MP++
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 175/433 (40%), Positives = 269/433 (62%), Gaps = 32/433 (7%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFG---------------------------- 132
G +H V K+GL +++ V TAL++MYAKFG
Sbjct: 124 GQKLHTQVLKIGLG-SDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYV 182
Query: 133 ---RMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
++LA +FD M + +WN MI G+ GD+ +A ++FD RD ISW++++
Sbjct: 183 RVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAA 242
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
+ K EAL F EMQ++ V PD VT++SVL+AC +VG LG+G IH + + + +
Sbjct: 243 YAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEID 302
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
+K+ +L+D+Y++CG I+ + +VF M+ R + +W+++I+G A +GF AL++F+ M
Sbjct: 303 LKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMIS 362
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
E KP+ V+F G L+ACSH GL+++G YF M K+Y VSP+IEHYGC+VD+ RAGRL+
Sbjct: 363 EDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQ 422
Query: 370 DALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYA 429
+A+ ++++MP P+ +V +LL ACR ++ +AE L++L+P VD NYVLL+N+Y+
Sbjct: 423 EAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYS 482
Query: 430 AVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSF 489
+WD +RR MK IQK PG SSIE+ + +HEF+AGD+SH ES+ I ML ++
Sbjct: 483 QAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITA 542
Query: 490 DLKLCGYVPETVA 502
LK GY P T +
Sbjct: 543 RLKANGYAPLTAS 555
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 153/355 (43%), Gaps = 51/355 (14%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH L+ K LD NN ++ L ++A DL Y R
Sbjct: 22 IHALIIKTSLDGNNFVLAKLLRRLFACSSANDLL---------------------YARS- 59
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEP-DYVTIISVL 222
+FDE+P D W ++ ++ +E++ F +M+ P D ++ V+
Sbjct: 60 -------VFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVI 112
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC + G G +H VLK ++ V LI++Y++ G IE AR + M LV
Sbjct: 113 QACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLV 172
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+N ++ + G + A + F+ M + D VS+ + + G + + FD
Sbjct: 173 PYNVLLAEYVRVGEINLAHDLFDRMPER----DLVSWNTMIHGHASLGDVGTAKKLFD-- 226
Query: 343 KKIYRVSPR-IEHYGCIVDLYSRAGRLEDALNVVENMPMK---PNEVVLGSLLAACRTKG 398
R R + + ++ Y++A + +AL + M + P++V + S+L+AC G
Sbjct: 227 ----RTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVG 282
Query: 399 DI----ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+ ++ E + + +++D + ++ L +MYA G D + ++ M R +
Sbjct: 283 ALGMGKMIHECIERNRIEIDLKLGTS---LVDMYAKCGDIDNSLRVFNGMNNRDV 334
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/464 (38%), Positives = 280/464 (60%), Gaps = 36/464 (7%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMT-LHGTNPNHITFITLLSGCADFPSQC 97
+STV V W I+ H G +A MT L P+ +T ++L+ CA +
Sbjct: 171 ESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGN-- 228
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L G +H +LGLD N +RV NA++D
Sbjct: 229 LERGKFLHSYSKELGLDEN---------------------------LRVN-----NAILD 256
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
Y + DIESA +F+ + +D +SWT++L+G K GYF+EAL F++MQ++ +E D +T
Sbjct: 257 MYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEIT 316
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++ VL+ACA G L G +IH + K + ++ + L+D+Y++CG I+ A QVF+RM
Sbjct: 317 LVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR 376
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
R + +WN++I G A++G +A+ F+ M+ + PD V+F L ACSHAGL+++GL
Sbjct: 377 VRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLA 436
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
F MK +++ PR+EHYGC+VDL RA +++DAL +ENMP+K N V+ +LL ACR+
Sbjct: 437 MFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSG 496
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G LAE++ + +++L+P YV+L+N+YA V +WD A K+R+ MK +GI+K PG S
Sbjct: 497 GHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSW 556
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL-CGYVPET 500
IE+ IH+F+AGDRSH+++E IY+M+E ++ + L G+VP T
Sbjct: 557 IELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGT 600
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 138/325 (42%), Gaps = 41/325 (12%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD+ A ++F +M D ++ G+ + EA+ + M GV D T VL
Sbjct: 59 GDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVL 118
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
ACA +G + +G H VLK F ++ V N LI Y CG A VF R +V
Sbjct: 119 AACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVV 178
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+WN +I G +A + + M K + +PD V+ + AC+ G +E G ++
Sbjct: 179 TWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERG-KFLHS 237
Query: 342 MKKIYRVSPRIEHYGCIVDLY-------------------------------SRAGRLED 370
K + + I+D+Y +++G ++
Sbjct: 238 YSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQE 297
Query: 371 ALNVVENMPMKP---NEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---L 424
AL + + M + +E+ L +L+AC G + + + L+D ++ + VL L
Sbjct: 298 ALALFQKMQLNKIELDEITLVGVLSACAQTGALDQG-KYIHLLID-KFEINCDLVLETAL 355
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGI 449
+MYA G D A ++ R M+ R +
Sbjct: 356 VDMYAKCGSIDLALQVFRRMRVRNV 380
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 109/251 (43%), Gaps = 41/251 (16%)
Query: 238 HRYVLKQDFKDNVKVCNTLIDLY--SRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
H +L+ N + LI S G + +AR++F +M N++I G+A +
Sbjct: 31 HALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQ 90
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF-DIMKK-----IYRVS 349
EA+ + M + G D ++ L AC+ G ++ G R+ +++K ++ ++
Sbjct: 91 NPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVIN 150
Query: 350 PRIEHY------GCIVDLYSRA------------------GRLEDALNVVENMP----MK 381
I+ Y GC D++ + G E A ++++ M ++
Sbjct: 151 ALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLR 210
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAG 438
P+EV + SL+ AC G++ + L Y +L G+D N + + +MY + A
Sbjct: 211 PDEVTMVSLVPACAQLGNLERGKFLHSYSKEL--GLDENLRVNNAILDMYCKCDDIESAQ 268
Query: 439 KIRRTMKGRGI 449
++ ++ + +
Sbjct: 269 EVFNRIREKDV 279
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/469 (39%), Positives = 274/469 (58%), Gaps = 36/469 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + I+ + +SGR EA F M PN T +T+LS CA S L LG
Sbjct: 226 VRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQ--SGSLELG 283
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ + GL N +V NA+ID Y +
Sbjct: 284 NWVRSWIEDHGLGSNLRLV--------------------------------NALIDMYSK 311
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
GD++ A +F+ + +D ISW ++ G+ ++EAL FR+MQ S VEP+ VT +S+
Sbjct: 312 CGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSI 371
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFK-DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
L ACA +G L +G WIH Y+ K+ N + +LID+Y++CG IE A+QVF M ++
Sbjct: 372 LPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKS 431
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
L SWN++I G A++G ALE F M+ EGF+PD ++F G L+ACSHAGL+E G + F
Sbjct: 432 LGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFS 491
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + Y +SP+++HYGC++DL RAG ++A +++NM MKP+ + GSLL ACR G++
Sbjct: 492 SMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNV 551
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E K+L +L+P YVLL+N+YA G+WD +IR + +G++K PG SSIE+
Sbjct: 552 ELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEV 611
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
S +HEF+ GD+ H +S+ IY ML+ + L+ G+VP+T + LY+ D
Sbjct: 612 DSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDT-SEVLYDMD 659
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 223/435 (51%), Gaps = 41/435 (9%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I + S A + RM L G PN TF LL CA + G IHG
Sbjct: 100 WNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQE--GKQIHGH 157
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLGL+ ++ V T+L++MYA+ G + A +VF ++ + ++ A+I GY RG ++
Sbjct: 158 VLKLGLE-SDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDD 216
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A R+F+E+PVRDA+SW A++ G+ + G FEEAL F+EM+ + V P+ T+++VL+ACA
Sbjct: 217 ARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQ 276
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G+L +G W+ ++ N+++ N LID+YS+CG ++ AR +F+ + ++ ++SWN +
Sbjct: 277 SGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVM 336
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G++ EAL F MQ+ +P+ V+F L AC++ G ++ G + K +
Sbjct: 337 IGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFL 396
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK-------------------------- 381
+ ++D+Y++ G +E A V M K
Sbjct: 397 GLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFR 456
Query: 382 --------PNEVVLGSLLAACRTKGDIILAERLMKYLV---DLDPGVDSNYVLLANMYAA 430
P+++ +L+AC G + L + +V D+ P + +Y + ++
Sbjct: 457 QMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKL-QHYGCMIDLLGR 515
Query: 431 VGKWDGAGKIRRTMK 445
G +D A + + M+
Sbjct: 516 AGLFDEAEALMKNME 530
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 179/413 (43%), Gaps = 54/413 (13%)
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA--KFGRMDL 136
NH + +TLLS C F + IH + K GL N + L++ A FG +
Sbjct: 32 NHPS-LTLLSTCKSFQNL-----KQIHSQIIKTGL-HNTQFALSKLIEFCAISPFGNLSY 84
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRR----GDIESAVRMFDEMPVRDAISWTALLNGFVK 192
A ++F+++ + F WN MI G G I+ VRM ++ ++ LL K
Sbjct: 85 ALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAK 144
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
G +E + + G+E D S++N A G LG + K +D V
Sbjct: 145 VGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFS---KSSLRDAVSF 201
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
LI Y+ GC++ AR++F+ + R VSWN++I G+A +G EAL +F M++
Sbjct: 202 -TALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANV 260
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
P+ + L+AC+ +G +E G + + + + + ++D+YS+ G L+ A
Sbjct: 261 APNESTMVTVLSACAQSGSLELG-NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKAR 319
Query: 373 NVVENMPMK----------------------------------PNEVVLGSLLAACRTKG 398
++ E + K PN+V S+L AC G
Sbjct: 320 DLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLG 379
Query: 399 DIILAERLMKYLVDLDPGV--DSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+ L + + Y+ G+ S + L +MYA G + A ++ MK + +
Sbjct: 380 ALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSL 432
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 257/422 (60%), Gaps = 32/422 (7%)
Query: 111 LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR 170
+G+ R +V+ A++ +K G ++ A +FD M ++S +WN+MI Y + GDI SA
Sbjct: 69 MGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINSARL 128
Query: 171 MFDEMPVRDAISWTALLNGFVKR--------------------------------GYFEE 198
MFD PV+D +SW A+++G+ K G F
Sbjct: 129 MFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGT 188
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
A+ F++MQ V+P VT++S+L+ACA++G L +G WIH Y+ + K +V + N LID
Sbjct: 189 AISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALID 248
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
+Y +CG +E A VF + ++ + WNSIIVG +NG EA+ F M+KEG KPDGV+
Sbjct: 249 MYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVT 308
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
F G L+ CSH+GL+ G RYF M +Y + P +EHYGC+VDL RAG L++AL ++ M
Sbjct: 309 FVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAM 368
Query: 379 PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAG 438
PMKPN +VLGSLL AC+ D L E++ + L++LDP NYV L+N+YA++ +WD
Sbjct: 369 PMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVN 428
Query: 439 KIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
R+ M RG+ K PG SSIE+ + +HEF+AGD SH + I + L+ ++ +LK G+VP
Sbjct: 429 TCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVP 488
Query: 499 ET 500
T
Sbjct: 489 NT 490
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 114/250 (45%), Gaps = 45/250 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W + IS + + G A F +M P +T ++LLS CA + L +G I
Sbjct: 170 SVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGA--LDMGEWI 227
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + L + +V++G AL+DMY K G ++ A VF + K+ F WN++I G
Sbjct: 228 HGYIRTKRL-KIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGL----- 281
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
G RG EEA+ F M+ G++PD VT + +L+
Sbjct: 282 ------------------------GMNGRG--EEAIAAFIVMEKEGIKPDGVTFVGILSG 315
Query: 225 CANVGTLGIGLWIHRYVLKQ----DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
C++ G L G RY + + V+ ++DL R G ++ A ++ + M +
Sbjct: 316 CSHSGLLSAG---QRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKP 372
Query: 281 LVSWNSIIVG 290
NS+++G
Sbjct: 373 ----NSMVLG 378
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 41/261 (15%)
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
V P + +L +CA G +G H ++K F+ ++ + L+D Y++ G ++ A+
Sbjct: 6 VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAK 65
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
+VF M +R +V+ N++I + +G+V EA F++M + + S+ +T G
Sbjct: 66 RVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMITCYCKLG 121
Query: 331 LIEDGLRYFDI--MKKIYRVSPRIEHY-------------------------GCIVDLYS 363
I FD +K + + I+ Y ++ Y
Sbjct: 122 DINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYV 181
Query: 364 RAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
+ G A+++ + M +KP EV + SLL+AC G + + E + Y+ +D
Sbjct: 182 QCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKID-- 239
Query: 421 YVLLAN----MYAAVGKWDGA 437
V+L N MY G + A
Sbjct: 240 -VVLGNALIDMYCKCGALEAA 259
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/441 (41%), Positives = 275/441 (62%), Gaps = 6/441 (1%)
Query: 63 EAALEFTRMTLHG-TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG 121
EA L F+ M G PN TF +L CA + G +HG V KLGL + V
Sbjct: 105 EALLYFSHMLTDGLVEPNKFTFPCVLKACAKLAR--IEEGKQLHGFVVKLGLVSDE-FVR 161
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFT-WNAMIDGYMRRGDIESAVRMFDEMPVRDA 180
+ L+ +Y G M A V+F R++ + WN MIDGY+R GD+ ++ +FD MP +
Sbjct: 162 SNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSV 221
Query: 181 ISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
+SW +++G + G+F+EA+E F +MQ+ V P+YVT++SVL A + +G + +G W+H +
Sbjct: 222 VSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLF 281
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFVGE 299
K + + + + + LID+YS+CG I+ A QVF+ + +K+ ++W++II G A++G +
Sbjct: 282 AEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARD 341
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
AL++F MQ+ G P V + G L+ACSHAGL+E+G + M I + PRIEHYGC+V
Sbjct: 342 ALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMV 401
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
DL RAG LE+A ++ NMP+KP++V+L +LL AC+ G+I + ER+ K L+ P
Sbjct: 402 DLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIEMGERIAKILMGWYPHDSG 461
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEH 479
+YV L+NM+A+ G W+G K+R MK I+K PG S IE+ IHEF+ D SH +E
Sbjct: 462 SYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSWIELDGVIHEFLVEDDSHPRAEG 521
Query: 480 IYSMLELLSFDLKLCGYVPET 500
I+SMLE +S L+ GY P T
Sbjct: 522 IHSMLEEMSDRLRSVGYRPNT 542
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 122/304 (40%), Gaps = 70/304 (23%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W IS ++G EA F M L PN++T +++L + + + LG +
Sbjct: 221 VVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGA--IELGKWV 278
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR-VKSSFTWNAMIDGYMRRG 163
H K ++ ++V+ G+AL+DMY+K G +D A VF+ +R K+ TW+A+I
Sbjct: 279 HLFAEKNEIEIDDVL-GSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAII------- 330
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
G G +AL+ F MQ +GV P V I VL+
Sbjct: 331 ------------------------GGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLS 366
Query: 224 ACANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC++ G + G I+ +++ ++ ++DL R GC+E A Q+ M
Sbjct: 367 ACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNM------ 420
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
KPD V L AC G IE G R I+
Sbjct: 421 ----------------------------PVKPDDVILKALLGACKMHGNIEMGERIAKIL 452
Query: 343 KKIY 346
Y
Sbjct: 453 MGWY 456
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 111/278 (39%), Gaps = 73/278 (26%)
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVG---------FAVNGFVGEALEYFNSMQKEGF-KPD 315
I++AR+ F ++H SWN+II F VN EAL YF+ M +G +P+
Sbjct: 65 IKYARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSL--EALLYFSHMLTDGLVEPN 122
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVS-------------------------- 349
+F L AC+ IE+G + + K+ VS
Sbjct: 123 KFTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFY 182
Query: 350 -PRIEH----YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
R+E + ++D Y R G L + + ++MP K + V +++ C G +
Sbjct: 183 QTRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNK-SVVSWNVMISGCAQNGHF---K 238
Query: 405 RLMKYLVDLDPG-VDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
++ D+ G V NYV L ++ AV + L +IE+G
Sbjct: 239 EAIEMFHDMQLGDVPPNYVTLVSVLPAVSR---------------------LGAIELGKW 277
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
+H F + I+ +++++ S CG + + V
Sbjct: 278 VHLFAEKNEIEIDDVLGSALIDMYS----KCGSIDKAV 311
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 176/466 (37%), Positives = 275/466 (59%), Gaps = 15/466 (3%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W + I + + + + F + +H P++ T ++ GCA + G IH
Sbjct: 82 IHWNTIIKCYVENQFSHDGIVLFHEL-VHEYLPDNFTLPCVIKGCARL--GVVQEGKQIH 138
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK-----------SSFTWNA 154
GL K+G ++V V +L++MY+K G +D A VFD M K + +WNA
Sbjct: 139 GLALKIGFG-SDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNA 197
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
MI+GYM+ GD +SA+ +F +MP+ D ++W ++ G+ G F +A++ F M G P
Sbjct: 198 MINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPS 257
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+ T++SVL+A + + LG G WIH Y+ K F+ + + +LI++Y++CGCIE A VF+
Sbjct: 258 HATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFR 317
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
+ K+ + W +IIVG ++G AL F M K G KP+ + F G L AC+HAGL++D
Sbjct: 318 AIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDD 377
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
G +YFD+M Y++ P +EHYGC+VD+ RAG LE+A N +ENMP+ PN+V+ SLL
Sbjct: 378 GRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGS 437
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPG 454
R G I + E + ++++ P Y+LL+NMYAA G W+ +R M RG +K PG
Sbjct: 438 RNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPG 497
Query: 455 LSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
SS+E +HEF+ GD SH +++ IY+ + + LK G+VP+T
Sbjct: 498 CSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDT 543
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 111/267 (41%), Gaps = 58/267 (21%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+ A +FD + R I W ++ +V+ + + + F E+ + PD T+ V+
Sbjct: 65 DLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHEL-VHEYLPDNFTLPCVIK 123
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
CA +G + G IH LK F +V V +L+++YS+CG I+ AR+VF M + +V
Sbjct: 124 GCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVL 183
Query: 284 WNSI------------------------------------------IVGFAVNGFVGEAL 301
WNS+ I G+ +NG +A+
Sbjct: 184 WNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAV 243
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK-------IYRVSPRIEH 354
+ F M K G +P + L+A S ++ G M+K I S
Sbjct: 244 KMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTS----- 298
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMK 381
++++Y++ G +E AL V + K
Sbjct: 299 ---LIEMYAKCGCIESALTVFRAIQKK 322
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYS--RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
+H + LK ++ V + L+ LYS + + +AR +F R+ +R+L+ WN+II + N
Sbjct: 35 LHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVEN 94
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
F + + F+ + E + PD + + C+ G++++G + + KI +
Sbjct: 95 QFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKI-GFGSDVFV 152
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSLLA 392
G +V++YS+ G ++ A V + M K N ++ G+L++
Sbjct: 153 QGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVS 194
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/460 (39%), Positives = 266/460 (57%), Gaps = 18/460 (3%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
KS V V W S I+ + R G EA + M + G P+ +T I ++S CA L
Sbjct: 139 KSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLED--L 196
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
LG H + + GL + V + AL+DMY K G ++ A +FD+M K+ +W M
Sbjct: 197 DLGRESHCYIEENGL-KLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTM--- 252
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+FDEMP +D + W A++ G+V +EAL F EMQ + PD VT+
Sbjct: 253 ------------LFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTM 300
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+S L+AC+ +G L +G+WIH Y+ K + NV + LID+Y++CG I A QVFQ +
Sbjct: 301 VSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPG 360
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R ++W +II G A++G A+ YF+ M PD V+F G L+AC H GL+E+G +Y
Sbjct: 361 RNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKY 420
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M + +SP+++HY C+VDL RAG LE+A ++++MP++ + VV G+L ACR G
Sbjct: 421 FSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHG 480
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++++ ER L+ +DP YVLLANMY W AGK R+ M+ RG++K PG SSI
Sbjct: 481 NVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSI 540
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
E+ ++EF+ D+SH +SE IY L L+ L+L P
Sbjct: 541 EVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLELVECTP 580
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 179/363 (49%), Gaps = 53/363 (14%)
Query: 35 TNNSKSTVNP-TVQWTSSISRHCRSGRIAEAALEFTR-MTLHGTNPNHITFITLLSGCAD 92
TN +T NP T W +I S EA + + R + GT P++ T+ L CA
Sbjct: 32 TNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACAR 91
Query: 93 FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTW 152
+ +G+ I G V LG D + F
Sbjct: 92 L--SLIRMGSEILGHVLHLGFDSD--------------------------------IFVS 117
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
NA+I + GD++ A +MFD+ VRD +SW +++NG+V+RG+ EAL +REM++ G++
Sbjct: 118 NAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIK 177
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD VT+I V+++CA + L +G H Y+ + K V + N L+D+Y +CG +E AR++
Sbjct: 178 PDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKL 237
Query: 273 FQRMHKRTLVS----------------WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
F M +T+VS WN++I G+ EAL FN MQ PD
Sbjct: 238 FDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDE 297
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
V+ L+ACS G ++ G+ ++K + +S + ++D+Y++ G++ A+ V +
Sbjct: 298 VTMVSCLSACSQLGALDVGIWIHHYIEK-HELSLNVALGTALIDMYAKCGKITKAIQVFQ 356
Query: 377 NMP 379
+P
Sbjct: 357 ELP 359
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 143/320 (44%), Gaps = 51/320 (15%)
Query: 179 DAISWTALLNGFVKRGYFEEALECF-REMQISGVEPDYVTIISVLNACANVGTLGIGLWI 237
+ SW + GF+ EA+ + R +Q G +PD T + ACA + + +G I
Sbjct: 42 NTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEI 101
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
+VL F ++ V N +I L CG ++ AR++F + R LVSWNS+I G+ G+
Sbjct: 102 LGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWA 161
Query: 298 GEALEYFNSMQKEGFKPDGVSFTGALTAC-----------SHAGLIEDGL---------- 336
EAL ++ M+ EG KPD V+ G +++C SH + E+GL
Sbjct: 162 YEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANAL 221
Query: 337 --------------RYFDIMKKIYRVS-----------PRIEHYGCIVDLYSRAGRLEDA 371
+ FD M VS + + ++ Y A R ++A
Sbjct: 222 MDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEA 281
Query: 372 L---NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-VLLANM 427
L N ++ M + P+EV + S L+AC G + + + Y+ + ++ L +M
Sbjct: 282 LALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDM 341
Query: 428 YAAVGKWDGAGKIRRTMKGR 447
YA GK A ++ + + GR
Sbjct: 342 YAKCGKITKAIQVFQELPGR 361
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 183/470 (38%), Positives = 277/470 (58%), Gaps = 11/470 (2%)
Query: 39 KSTVNPTVQWTSS----ISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFP 94
+++ PTV ++ SR R G + + L F RM + PN+ TF L GC
Sbjct: 47 RTSTPPTVFLFNTTIRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGC---- 102
Query: 95 SQCLF--LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTW 152
S C+ LG HG+V K + + V V +++ Y+ GR++ A VFD +W
Sbjct: 103 SNCVAFDLGRQFHGMVIKNSFEMD-VFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSW 161
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N+MIDG +R G+I A+ +F +M R+ ISW +++G+ + G +EAL FREMQ+ E
Sbjct: 162 NSMIDGCIRNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQE 221
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P+ ++SVL+AC+ +G L G W+H Y+ K+ + + + LID+Y++CG I+ A Q
Sbjct: 222 PNSAILVSVLSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQA 281
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F KR + ++ + I G A+NG EAL+ F M+ EG PDGVS+ L ACSHAG +
Sbjct: 282 FSTSRKRDVSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWV 341
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
E G YF M ++ + P ++HY C+VDL RAG LE+A V +MP+KP+ V+ G+LL
Sbjct: 342 EKGFHYFASMSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLG 401
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
ACR G+ + +R+ LV+ D D Y+LL+N+YA K + A ++R+TM+ R + +
Sbjct: 402 ACRVYGNAEMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRV 461
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
PG S IE+ +HEF +GDRSH ++E IY M E + ++K GY ET A
Sbjct: 462 PGCSLIEVAGFVHEFFSGDRSHEKTEEIYLMWEEIVKEIKKFGYREETRA 511
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 19/197 (9%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
SK T + W IS + ++G+ EA F M + PN +++LS C+
Sbjct: 182 SKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQ----- 236
Query: 98 LFLGAMIHG--LVCKLGLD--RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWN 153
LGA+ HG + C +G R + ++ AL+DMYAK G +DLA F R + +
Sbjct: 237 --LGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYT 294
Query: 154 AMIDGYMRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQ-I 208
A I G G E A+++F++M D +S+ A+L G+ E+ F M +
Sbjct: 295 AAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDV 354
Query: 209 SGVEPD---YVTIISVL 222
G+ P+ Y ++ +L
Sbjct: 355 HGIRPELDHYACMVDLL 371
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 176/460 (38%), Positives = 271/460 (58%), Gaps = 5/460 (1%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLG 101
NP +S+ R S + AL L G P+H+T+ ++ C + S + G
Sbjct: 128 NPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE--SSVTWFG 185
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
++H V K G + ++ +V ++L+ +YA + A +F+ + +WNAMIDGY++
Sbjct: 186 LLVHTHVVKSGFECDSYIV-SSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVK 244
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
++ A +FD M RD ISW ++NG+ G EAL F +M+ GV+P T++S+
Sbjct: 245 HVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSL 304
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+ACA++G L GL +H Y+ + N V L+D+Y++CG I A QVF M + +
Sbjct: 305 LSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDV 364
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
++WN+II G A++G V EA + F M++ G +P+ ++F L+ACSHAG++++G + D
Sbjct: 365 LAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDC 424
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M Y + P++EHYGC++DL +RAG LE+A+ ++ MPM+PN LG+LL CR G+
Sbjct: 425 MSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFE 484
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
L E + K L++L P Y+LL+N+YAA KWD A K+R MK GI K PG+S IE+
Sbjct: 485 LGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELK 544
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLK-LCGYVPET 500
+H F+AGD SH ES IY L + LK GY +T
Sbjct: 545 GMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADT 584
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 176/456 (38%), Positives = 271/456 (59%), Gaps = 5/456 (1%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHG--TNPNHITFITLLSGCADFPSQ 96
+S V V W + I + RSG EA F R+ G P+ +T I +SGCA
Sbjct: 181 ESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGD- 239
Query: 97 CLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMI 156
L LG +H V G+ R V + A++DMY K G ++LA VF+ + +++ +W MI
Sbjct: 240 -LELGKRLHEFVDNKGV-RCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMI 297
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
G+ R G +E A +FDEMP RD W AL+ G+V+ +EA+ F EMQ S V+P+ +
Sbjct: 298 VGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEI 357
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T++++L+AC+ +G L +G+W+H Y+ + +V + +L+D+Y++CG I+ A VF +
Sbjct: 358 TMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEI 417
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+ ++W S+I G A +G EA+EYF M G +PD ++F G L+AC HAGL+E G
Sbjct: 418 PVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGR 477
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
++F +M Y + +++HY C++DL RAG L++A +V MPM P+ VV G+L ACR
Sbjct: 478 QFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRM 537
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
G+I L E+ LV+LDP YVLLANMYA A K+R M+ G++K PG S
Sbjct: 538 HGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCS 597
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
IE+ +HEF+ D+SH+++ IY L ++ ++
Sbjct: 598 CIELNGVVHEFIVKDKSHLDTNAIYDCLHEITLQMR 633
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 191/438 (43%), Gaps = 82/438 (18%)
Query: 11 PQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTR 70
P+P L H +L + P + N + ++ + RHC L R
Sbjct: 61 PRPLL-HALAILASLPSPPDSAFPYNAAFRALS-LCPHQHLVDRHC---------LPLYR 109
Query: 71 MTLHG--TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMY 128
LH P+H+TF L+ CA Q GA + G V KLG +
Sbjct: 110 ALLHSGSARPDHLTFPFLIKACARL--QYRSYGAAVLGHVQKLGFSAD------------ 155
Query: 129 AKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLN 188
F NA + + RG + A R+FDE PVRD +SW L+
Sbjct: 156 --------------------VFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIG 195
Query: 189 GFVKRGYFEEALECFREMQISG--VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
G+V+ G EALE F + G V PD VT+I ++ CA +G L +G +H +V +
Sbjct: 196 GYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGV 255
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA-------------- 292
+ V++ N ++D+Y +CG +E A VF+R+ RT VSW ++IVG A
Sbjct: 256 RCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDE 315
Query: 293 ------------VNGFV-----GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+ G+V EA+ F+ MQK P+ ++ L+ACS G +E G
Sbjct: 316 MPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMG 375
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
+ + + +++ + +VD+Y++ G ++ A+ V +P++ N + S++
Sbjct: 376 MWVHHYIDR-HKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQ-NALTWTSMICGLA 433
Query: 396 TKGDIILAERLMKYLVDL 413
G A + ++DL
Sbjct: 434 NHGHADEAIEYFQRMIDL 451
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 182/440 (41%), Positives = 265/440 (60%), Gaps = 10/440 (2%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ M G +P+ TF LL CA L G +HGLV K G + ++ V T+L+ +
Sbjct: 96 YHSMRKEGLSPDSFTFPFLLKACARLLDSKL--GIKLHGLVVKAGCE-SDAFVNTSLVSL 152
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF-------DEMPVRDA 180
Y K G +D A VFD + K+ W A+I GY+ G A+ MF D M +D
Sbjct: 153 YGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDI 212
Query: 181 ISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
+SW++++ G+ G +EAL+ F +M G PD ++ VL ACA +G L +G W
Sbjct: 213 VSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNL 272
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
+ + +F N + LID+Y++CG ++ A +VF+ M K+ +V WN+ I G A++G V A
Sbjct: 273 MDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAA 332
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
F M+K G +PDG +F G L AC+HAGL+++G +YF+ M++++ ++P IEHYGC+VD
Sbjct: 333 FGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVD 392
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
L RAG L++A +V++MPM+ N +V G+LL CR D L E ++K L+ L+P N
Sbjct: 393 LLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGN 452
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHI 480
YVLL+N+Y+A KW+ A KIR M RGI+K PG S IE+ +HEF+ GD SH SE I
Sbjct: 453 YVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKI 512
Query: 481 YSMLELLSFDLKLCGYVPET 500
Y+ L L DLK GYVP T
Sbjct: 513 YAKLGELVKDLKASGYVPTT 532
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 136/317 (42%), Gaps = 73/317 (23%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H + +LGLD ++ ++ +L FG + + +F + + F +N MI
Sbjct: 29 VHAALLRLGLDEDSYLL-NKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMI------- 80
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+G V F+E++E + M+ G+ PD T +L
Sbjct: 81 ------------------------HGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLK 116
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR-------- 275
ACA + +G+ +H V+K + + V +L+ LY +CG I+ A +VF
Sbjct: 117 ACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAA 176
Query: 276 ------------------------------MHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
M ++ +VSW+S+I G+A NG EAL+ F
Sbjct: 177 WTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFF 236
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM-KKIYRVSPRIEHYGCIVDLYSR 364
M EGF+PD + G L AC+ G +E G ++M + + +P + ++D+Y++
Sbjct: 237 KMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLG--TALIDMYAK 294
Query: 365 AGRLEDALNVVENMPMK 381
GR++ A V M K
Sbjct: 295 CGRMDSAWEVFRGMRKK 311
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 173/456 (37%), Positives = 278/456 (60%), Gaps = 4/456 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ +S + ++ EA + F M G + + ++ LS C+ + + +G +H
Sbjct: 236 VSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLN--VEMGRWVH 293
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD-AMRVKSSFTWNAMIDGYMRRGD 164
GL K+G++ + V + AL+ +Y+ G + A +FD + +WN+MI GY+R G
Sbjct: 294 GLAVKVGVE-DYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGS 352
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A +F MP +D +SW+A+++G+ + F EAL F+EMQ+ GV PD ++S ++A
Sbjct: 353 IQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISA 412
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C ++ TL +G WIH Y+ + + NV + TLID+Y +CGC+E A +VF M ++ + +W
Sbjct: 413 CTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTW 472
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I+G A+NG V ++L F M+K G P+ ++F G L AC H GL+ DG YF+ M
Sbjct: 473 NAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIH 532
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+++ I+HYGC+VDL RAG L++A ++++MPM P+ G+LL ACR D + E
Sbjct: 533 EHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGE 592
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
RL + L+ L P D +VLL+N+YA+ G W +IR M G+ K PG S IE +
Sbjct: 593 RLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTV 652
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF+AGD++H + I ML++++ LK+ GYVP T
Sbjct: 653 HEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVPTT 688
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 184/417 (44%), Gaps = 75/417 (17%)
Query: 43 NP-TVQWTSSISRHCR-SGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
NP T W + + H +A L + P+ T+ LL CA S+ F
Sbjct: 66 NPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSE--FE 123
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +H G D +V V L+++YA G + A VF+ V +WN ++ GY+
Sbjct: 124 GRQLHAHAVSSGFD-GDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYV 182
Query: 161 RRGDIESAVRMFDEMP---------------------------------VRDAISWTALL 187
+ G++E A R+F+ MP RD +SW+A++
Sbjct: 183 QAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMV 242
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
+ + + EEAL F EM+ SGV D V ++S L+AC+ V + +G W+H +K +
Sbjct: 243 SCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVE 302
Query: 248 DNVKVCNTLIDLYS--------------------------------RCGCIEFARQVFQR 275
D V + N LI LYS RCG I+ A +F
Sbjct: 303 DYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYS 362
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M ++ +VSW+++I G+A + EAL F MQ G +PD + A++AC+H ++ G
Sbjct: 363 MPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLG 422
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLG 388
++ ++ + ++D+Y + G +E+AL V M K N V+LG
Sbjct: 423 -KWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILG 478
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 34/201 (16%)
Query: 140 VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
+F+ +R ++FTWN ++ ++ P +A
Sbjct: 60 IFNHLRNPNTFTWNTIMRAHL----------YLQNSP--------------------HQA 89
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL 259
L ++ S +PD T +L CA + G +H + + F +V V NTL++L
Sbjct: 90 LLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNL 149
Query: 260 YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
Y+ CG + AR+VF+ LVSWN+++ G+ G V EA F M + + ++
Sbjct: 150 YAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPER----NTIAS 205
Query: 320 TGALTACSHAGLIEDGLRYFD 340
+ G +E R F+
Sbjct: 206 NSMIALFGRKGCVEKARRIFN 226
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 183/456 (40%), Positives = 276/456 (60%), Gaps = 5/456 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W I S + L + RM N TF +LL C++ + L I
Sbjct: 109 TFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSA--LEETTQI 166
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + KLG + N+V +L++ YA G LA ++FD + + +WN++I GY + G
Sbjct: 167 HAQITKLGYE-NDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGK 225
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ A+ +F +M ++AISWT +++G+V+ G +EAL+ F EMQ S VEPD V++ + L+A
Sbjct: 226 MDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSA 285
Query: 225 CANVGTLGIGLWIHRYVLKQDFK-DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
CA +G L G WIH Y+ K + D+V C LID+Y++CG + A +VF+ + ++++ +
Sbjct: 286 CAQLGALEQGKWIHSYLTKTRIRMDSVLGC-VLIDMYAKCGDMGEALEVFKNIQRKSVQA 344
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W ++I G+A +G EA+ F MQK G KP+ ++FT LTACS+ GL+E+G F M+
Sbjct: 345 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNME 404
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ Y + P IEHYGC+VDL SRAG L++A ++ MP+KPN V+ G+LL ACR +I L
Sbjct: 405 RDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 464
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E + + L+ +DP YV AN++A KWD A + RR MK +G+ K PG S+I +
Sbjct: 465 EEIGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGT 524
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
HEF+AGDRSH E E I S +++ L+ GYVPE
Sbjct: 525 THEFLAGDRSHPEIEKIQSKWKIMRRKLEENGYVPE 560
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 137/287 (47%), Gaps = 17/287 (5%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL---ATVVFDAMRVKSSFTWNAMIDGYM 160
IH + K GL +++ + T L D A +VFD +F WN MI G+
Sbjct: 62 IHARMLKTGLIQDSYAI-TKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFS 120
Query: 161 RRGDIESAVRMFDEM----PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
+ E ++ ++ M +A ++ +LL EE + ++ G E D
Sbjct: 121 CSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYENDVY 180
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+ S++N+ A G + + + K D N++I Y++ G ++ A +F++M
Sbjct: 181 AVNSLINSYAATGNFKLAHLLFDRIPKPD----AVSWNSVIKGYAKAGKMDIALTLFRKM 236
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
++ +SW ++I G+ G EAL+ F+ MQ +PD VS AL+AC+ G +E G
Sbjct: 237 VEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 296
Query: 337 RYFDIMKKIYRVSPRIEH-YGCI-VDLYSRAGRLEDALNVVENMPMK 381
+ K R+ R++ GC+ +D+Y++ G + +AL V +N+ K
Sbjct: 297 WIHSYLTKT-RI--RMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRK 340
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/457 (40%), Positives = 281/457 (61%), Gaps = 3/457 (0%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T V W S I + G EA L F +M G P+ TF+ LLS C+ S+ L L
Sbjct: 150 TDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQ--SRDLDL 207
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +H + G+ + +++V AL+DMYAK G + A +FD + K+ +W +MI Y
Sbjct: 208 GRYVHFCIEITGV-KIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYA 266
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G IE A ++FD+MP ++ +SW ++++ +++ G + EAL+ F +M+ S V PD T++S
Sbjct: 267 QHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVS 326
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+L AC+ +G L +G IH Y+L V + N+LID+Y++CG + A +F M +
Sbjct: 327 ILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKN 386
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
LVSWN II A++G EA++ F MQ +G PD ++ TG L+ACSH+GL++ GL YFD
Sbjct: 387 LVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFD 446
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M IYRV IEHY C+VDL R G L +A+ ++ MPMKP+ VV G+LL ACR G++
Sbjct: 447 RMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNV 506
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+ ++++K L++L+P YVL++N+Y +W+ KIR+ M RGI+K +SSIEI
Sbjct: 507 EIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEI 566
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV 497
I+EFM D+ H S IY+ML+ L+ L+ GY+
Sbjct: 567 DGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSAGYL 603
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 167/380 (43%), Gaps = 75/380 (19%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
+ S I + S +A L F RM G +PN T +L C + ++HGL
Sbjct: 56 YNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACG--CKSAYWEAVLVHGL 113
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
KLG+ + V V AL+ +Y G + A +FD + K+ +WN+MI GY G+
Sbjct: 114 AIKLGIG-SLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGN--- 169
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
++EA FR+M+ G+EPD T +++L+ C+
Sbjct: 170 ----------------------------WKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQ 201
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC------------------------ 263
L +G ++H + K ++ V N L+D+Y++C
Sbjct: 202 SRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSM 261
Query: 264 -------GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
G IE ARQ+F +M + +VSWNS+I + G EAL+ FN M+ PD
Sbjct: 262 ISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDE 321
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIM---KKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
+ L ACS G + G + + + K Y V+ Y ++D+Y++ G + AL+
Sbjct: 322 ATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTL----YNSLIDMYAKCGPVVTALD 377
Query: 374 VVENMPMK---PNEVVLGSL 390
+ MP K V++G+L
Sbjct: 378 IFLEMPGKNLVSWNVIIGAL 397
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 124/244 (50%), Gaps = 2/244 (0%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD++ A RMFD++P + + +L+ G+ +A+ FR M SG+ P+ T+ VL
Sbjct: 36 GDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVL 95
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC + +H +K V V N LI +Y CG I AR++F + +TLV
Sbjct: 96 KACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLV 155
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWNS+I G+A G EA F M++ G +PDG +F L+ CS + ++ G RY
Sbjct: 156 SWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLG-RYVHFC 214
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+I V I +VD+Y++ G L A + + K N V S+++A G I +
Sbjct: 215 IEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEK-NVVSWTSMISAYAQHGSIEV 273
Query: 403 AERL 406
A ++
Sbjct: 274 ARQI 277
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/459 (38%), Positives = 272/459 (59%), Gaps = 11/459 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I R+CR G + EA F M P+ + ++S C G M
Sbjct: 180 VVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGR-------TGNMR 232
Query: 105 HGLVCKLGLDRNNVMVGT----ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
+ L N+V + T AL+ MYA G MD+A F M V++ F AM+ GY
Sbjct: 233 YNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYS 292
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G ++ A +FD+ ++D + WT +++ + + + +EAL F EM SG++PD VT++S
Sbjct: 293 KAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLS 352
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
V++AC N+GTL W+HRY + + + N LI++Y++CG ++ AR VF++M R
Sbjct: 353 VISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRN 412
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+VSW+S+I FA++G ++L F M++E +P+ V+F G L CSH+GL+E+G + F
Sbjct: 413 VVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA 472
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M Y ++P+IEHYGC+VDL+ RA L +AL V+E+MPM PN V+ GSL++ACR G++
Sbjct: 473 SMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGEL 532
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E K ++ L+P D VL++N+YA +WD IR M+ + + K+ GLS I++
Sbjct: 533 ELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDL 592
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
HEF+ GD+ H +S IY+ L + LKL GYVP+
Sbjct: 593 NGKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKLAGYVPD 631
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 172/397 (43%), Gaps = 70/397 (17%)
Query: 37 NSKSTVNP---TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADF 93
N S+++P ++ + S + RSG L + R+ G + I+F +L +
Sbjct: 68 NLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKV 127
Query: 94 PSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWN 153
+ LF G +HG K+ ++ V T L+DMYA GR++ A VFD M + TWN
Sbjct: 128 SA--LFEGMELHGFAFKIA-TLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWN 184
Query: 154 AMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEP 213
MI+ Y R G ++ A ++F+ EM+ S V P
Sbjct: 185 TMIERYCRFGLLDEAFKLFE-------------------------------EMKDSNVMP 213
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
D + + ++++AC G + I+ ++++ D + + + L+ +Y+ GC++ A + F
Sbjct: 214 DEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFF 273
Query: 274 QRMHKRT-------------------------------LVSWNSIIVGFAVNGFVGEALE 302
++M R LV W ++I +A + EAL
Sbjct: 274 RKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALR 333
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M G KPD V+ ++AC + G + D ++ + + + ++++Y
Sbjct: 334 VFEEMCCSGIKPDVVTMLSVISACVNLGTL-DKAKWVHRYTHLNGLESVLPIDNALINMY 392
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
++ G L+ A +V E MP + N V S++ A G+
Sbjct: 393 AKCGGLDAARDVFEKMPTR-NVVSWSSMINAFAMHGE 428
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 146/349 (41%), Gaps = 68/349 (19%)
Query: 168 AVRMFDEM-PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A+ +F + P+ ++I + +LL + G + ++ ++ G D ++ +L A +
Sbjct: 66 ALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVS 125
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
V L G+ +H + K + V L+D+Y+ CG I +AR VF M +R +V+WN+
Sbjct: 126 KVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNT 185
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG------LIEDGLRYFD 340
+I + G + EA + F M+ PD + ++AC G I D L D
Sbjct: 186 MIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEND 245
Query: 341 IMKKIYRVSPRIEHY---GC---------------------IVDLYSRAGRLED------ 370
+ + ++ + Y GC +V YS+AGRL+D
Sbjct: 246 VRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFD 305
Query: 371 -------------------------ALNVVENM---PMKPNEVVLGSLLAACRTKGDIIL 402
AL V E M +KP+ V + S+++AC G +
Sbjct: 306 QTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDK 365
Query: 403 AERLMKY--LVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
A+ + +Y L L+ + + L+ NMYA G D A + M R +
Sbjct: 366 AKWVHRYTHLNGLESVLPIDNALI-NMYAKCGGLDAARDVFEKMPTRNV 413
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/470 (38%), Positives = 273/470 (58%), Gaps = 36/470 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + IS + +SGR+ EA F M PN T +++LS CA S L LG
Sbjct: 222 VRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSS-LQLG 280
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ + GL N +V N +ID Y++
Sbjct: 281 NWVRSWIEDRGLGSNIRLV--------------------------------NGLIDMYVK 308
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
GD+E A +F+++ ++ +SW ++ G+ ++EAL FR M S ++P+ VT +S+
Sbjct: 309 CGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSI 368
Query: 222 LNACANVGTLGIGLWIHRYVLK--QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACAN+G L +G W+H YV K + K+ V + +LID+Y++CG + A+++F M+ +
Sbjct: 369 LPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTK 428
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+L +WN++I GFA++G AL F+ M EGF PD ++F G LTAC HAGL+ G RYF
Sbjct: 429 SLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYF 488
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M + Y+VSP++ HYGC++DL+ RAG ++A +V+NM MKP+ + SLL ACR
Sbjct: 489 SSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRR 548
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
I LAE + K+L +L+P S YVLL+N+YA G+W+ KIR + ++K PG SSIE
Sbjct: 549 IELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIE 608
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
+ S +HEF+ GD+ H +S IY ML+ + L+ G+VP+T + LY+ D
Sbjct: 609 VDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDT-SEVLYDMD 657
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 223/450 (49%), Gaps = 50/450 (11%)
Query: 39 KSTVNPT-VQWTSSISRHCRSGRIAEAALEF-TRMTLHGTNPNHITFITLLSGCADFPSQ 96
K+ NP V W I R S ALE+ M GT PN TF ++ C +
Sbjct: 86 KTIRNPNHVIWNHMI-RGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKI--R 142
Query: 97 CLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMI 156
G +H V KLGL+ +N V T+L++MYA+ G + A +VFD ++ + ++ A+I
Sbjct: 143 GAHEGKQVHAHVLKLGLE-HNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALI 201
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
GY +G ++ A +FDE+PVRD +SW A+++G+ + G EEA+ F EM+ + V P+
Sbjct: 202 TGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVS 261
Query: 217 TIISVLNACANVG-TLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
T++SVL+ACA G +L +G W+ ++ + N+++ N LID+Y +CG +E A +F++
Sbjct: 262 TMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEK 321
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+ + +VSWN +I G+ EAL F M + P+ V+F L AC++ G ++ G
Sbjct: 322 IQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLG 381
Query: 336 L---RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK----------- 381
Y D K + + + + ++D+Y++ G L A + + M K
Sbjct: 382 KWVHAYVD--KNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISG 439
Query: 382 -----------------------PNEVVLGSLLAACRTKGDIILAERLMKYLVD---LDP 415
P+++ +L AC+ G + L R ++ + P
Sbjct: 440 FAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSP 499
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+ +Y + +++ G +D A + + M+
Sbjct: 500 KL-PHYGCMIDLFGRAGLFDEAETLVKNME 528
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 57/300 (19%), Positives = 116/300 (38%), Gaps = 73/300 (24%)
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL--YSRCGCIEFARQVFQRM 276
+++L+ C + TL IH ++K + + LI+ S G + +A +F+ +
Sbjct: 32 LTLLSNCKTLQTLK---QIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTI 88
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS--------- 327
V WN +I G + + ALEY+ M G +P+ +F +C+
Sbjct: 89 RNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGK 148
Query: 328 --HAGLIEDGLR------------------------------------------------ 337
HA +++ GL
Sbjct: 149 QVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKG 208
Query: 338 YFDIMKKIYRVSP--RIEHYGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLA 392
+ D ++++ P + + ++ Y+++GR+E+A+ E M + PN + S+L+
Sbjct: 209 FLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLS 268
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
AC G + ++ ++ D G+ SN L L +MY G + A + ++ + +
Sbjct: 269 ACAQSGSSLQLGNWVRSWIE-DRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNV 327
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/454 (37%), Positives = 277/454 (61%), Gaps = 4/454 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + +S + R G EA M G P+ +T ++ +S A LF G + H
Sbjct: 299 VLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVD--LFYGKVCH 356
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V + GL+ + +G ++DMY K G+ ++A VFD M K+ +WN++ G++R GD+
Sbjct: 357 GYVIRNGLEGWDS-IGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDV 415
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
ESA +F+++P R+A+ W +++G V++ FE+A+E FREMQ G++ D VT++ + +AC
Sbjct: 416 ESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASAC 475
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+G + W+H Y+ K ++++ L+D+++RCG + A QVF +M +R + +W
Sbjct: 476 GYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWT 535
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+ I A+ G A FN M +G KPD V F LTACSH G +E GL F +M+
Sbjct: 536 AAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED- 594
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ +SP+IEHYGC+VDL RAG L +A +++++MPM+PN+VV GSLLAACR ++ +A
Sbjct: 595 HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATY 654
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ + +L P +VLL+N+YA+ GKW ++R ++ +G++K PG SS+++ IH
Sbjct: 655 AAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIH 714
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
EF +GD SH E HI ML+ ++ G++P+
Sbjct: 715 EFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPD 748
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 195/416 (46%), Gaps = 67/416 (16%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
S I + +G EA L + RM + G PNH TF +LSGC + C G +HG V
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCE--GIQVHGSV 157
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
K+GL+ + V + L+ YA+ G MD G+
Sbjct: 158 VKMGLEED-VFIQNCLIHFYAECGHMD---------------------HGH--------- 186
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
++F+ M R+ +SWT+L+ G+ + +EA+ F EM +G+ P VT++ V++ACA +
Sbjct: 187 -KVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKL 245
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
L +G + Y+ + K N + N L+D+Y +CG I+ A+++F R LV +N+I+
Sbjct: 246 RDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTIL 305
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLR 337
+A G EAL + M ++G +PD V+ A++A + H +I +GL
Sbjct: 306 SNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLE 365
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
+D + + I+D+Y + G+ E A V + M K V SL A
Sbjct: 366 GWDSIGNV------------IIDMYMKCGKPEMACRVFDLMSNK-TVVSWNSLTAGFIRN 412
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGK---WDGAGKIRRTMKGRGIQ 450
GD+ A + + + N V M + + + ++ A ++ R M+G GI+
Sbjct: 413 GDVESAWEVFNQI------PERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIK 462
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 156/365 (42%), Gaps = 66/365 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WTS I + R R EA F M G P+ +T + ++S CA L +G +
Sbjct: 197 VVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRD--LDMGERV 254
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ +LGL N VMV AL+DMY K G +D A +FD ++ +N ++ Y R+G
Sbjct: 255 CAYIGELGLKLNKVMV-NALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGL 313
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A+ + DEM +Q G PD VT++S ++A
Sbjct: 314 AREALAILDEM------------------------------LQ-QGPRPDRVTMLSAISA 342
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
A + L G H YV++ + + N +ID+Y +CG E A +VF M +T+VSW
Sbjct: 343 SAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSW 402
Query: 285 NSIIVGFAVNGFVGEALEYFNS-------------------------------MQKEGFK 313
NS+ GF NG V A E FN MQ EG K
Sbjct: 403 NSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIK 462
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
D V+ G +AC + G E ++K + + +VD+++R G + A+
Sbjct: 463 ADRVTMMGIASACGYLGAPELAKWVHTYIEK-NGIPCDMRLNTALVDMFARCGDPQSAMQ 521
Query: 374 VVENM 378
V M
Sbjct: 522 VFNKM 526
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/454 (37%), Positives = 273/454 (60%), Gaps = 8/454 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I+ + ++G EA F M P+ +T +++S CA + + +G +
Sbjct: 218 VVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSA--IKVGQEV 275
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V K+ RN++++ A +DMYAK R+ A +FD+M +++ +M+ GY
Sbjct: 276 HARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAAS 335
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++A MF +M R+ +SW AL+ G+ + G EEAL F ++ V P + T ++L A
Sbjct: 336 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKA 395
Query: 225 CANVGTLGIGLWIHRYVLKQDFK------DNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
CA++ L +G+ H +VLK FK D++ V N+LID+Y +CGC+E VF++M +
Sbjct: 396 CADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME 455
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R VSWN++I+GFA NG+ EALE F M G KPD ++ G L+AC HAG +E+G Y
Sbjct: 456 RDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHY 515
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M + + V+P +HY C+VDL RAG LE+A +++E MP++P+ V+ GSLLAAC+
Sbjct: 516 FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHR 575
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
+I L + + + L +++ YVLL+NMYA +GKW A +R+ M+ G+ K+PG S I
Sbjct: 576 NITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWI 635
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+I H FM D+SH + I+S+L++L +++
Sbjct: 636 KIPGHAHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 168/330 (50%), Gaps = 9/330 (2%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
F LL C + + +H V K G N V + L+D YAK G ++ +FD
Sbjct: 22 FAKLLDSCIKLKLSAIDVRC-VHASVIKSGFS-NEVFIQNRLIDAYAKCGSLEDGRQLFD 79
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
M ++ FTWN+++ G + G ++ A +F MP RD +W ++++GF + EEAL
Sbjct: 80 KMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYY 139
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
F M G + T S L+AC+ + + G+ IH + K +V + + L+D+YS+
Sbjct: 140 FAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSK 199
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
CG + A+QVF M R +VSWNS+I + NG EAL+ F M + +PD V+
Sbjct: 200 CGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASV 259
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK- 381
++AC+ I+ G + K+ ++ I VD+Y++ R+++A + ++MP++
Sbjct: 260 ISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 382 ---PNEVVLGSLLAACRTKGDII---LAER 405
+V G +AA ++ +AER
Sbjct: 320 VIAETSMVSGYAMAASTKAARLMFTKMAER 349
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 166/435 (38%), Positives = 272/435 (62%), Gaps = 4/435 (0%)
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
G P+++TF L+ C C+ +G+ HG + K G +++ V V +L+ MYA FG
Sbjct: 114 GLLPDNLTFPFLVKSCTKL--HCISMGSQAHGHIIKHGFEKD-VYVQNSLVHMYATFGDT 170
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
+ AT++F M +W +MI G+ + GD+ESA ++FD+MP ++ ++W+ +++G+ +
Sbjct: 171 EAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNN 230
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
+F++A+E F+ +Q GV + ++SV+++CA++G L +G H YV+K N+ +
Sbjct: 231 HFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGT 290
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
L+D+Y+RCG I+ A VF+ + +R +SW ++I G A++G+ +L+YF +M + G P
Sbjct: 291 ALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTP 350
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
++FT L+ACSH GL+E G + F+ MK+ +RV PR+EHYGC+VDL RAG+LE+A
Sbjct: 351 RDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERF 410
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
V MP+KPN V G+LL ACR + + ER+ K L+ L P YVLL+N+YA +W
Sbjct: 411 VLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEW 470
Query: 435 DGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC 494
+ ++R+ MK +G++K PG S IE+ +H+F GD SH E + I M E + ++
Sbjct: 471 EKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAA 530
Query: 495 GYVPETVAGELYEND 509
GY T A L++ D
Sbjct: 531 GYRGNT-ADALFDID 544
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 131/280 (46%), Gaps = 36/280 (12%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A R+F ++ + + A++ G ++A + + Q G+ PD +T ++ +
Sbjct: 69 IDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKS 128
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C + + +G H +++K F+ +V V N+L+ +Y+ G E A +FQRM+ +VSW
Sbjct: 129 CTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSW 188
Query: 285 NSIIVGF-------------------------------AVNGFVGEALEYFNSMQKEGFK 313
S+I GF A N +A+E F +Q +G +
Sbjct: 189 TSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVR 248
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
+ +++C+H G +E G R D + K ++ + +VD+Y+R G ++ A+
Sbjct: 249 ANETVMVSVISSCAHLGALELGERAHDYVVK-NGMTLNLILGTALVDMYARCGSIDKAVW 307
Query: 374 VVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
V E++P + + + +L+A G +ER +KY +
Sbjct: 308 VFEDLPER-DTLSWTALIAGLAMHG---YSERSLKYFATM 343
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 117/263 (44%), Gaps = 22/263 (8%)
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI----DLYSRCGCIEFARQVFQRMH 277
L C+++ L I IH Y+++ +V + LI D S I++A ++F ++
Sbjct: 24 LETCSDLTHLKI---IHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQ 80
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
L +N++I G + + +A ++ Q++G PD ++F + +C+ I G +
Sbjct: 81 NPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQ 140
Query: 338 -YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+ I+K + +++ +V +Y+ G E A + + M + V S++
Sbjct: 141 AHGHIIKHGFEKDVYVQN--SLVHMYATFGDTEAATLIFQRM-YYVDVVSWTSMIRGFNK 197
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANM---YAAVGKWDGAGKIRRTMKGRGIQKKP 453
GD+ A +L D + N V + M YA +D A ++ + ++ +G++
Sbjct: 198 CGDVESARKL------FDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANE 251
Query: 454 GLSSIEIGSGIH--EFMAGDRSH 474
+ I S H G+R+H
Sbjct: 252 TVMVSVISSCAHLGALELGERAH 274
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/456 (36%), Positives = 274/456 (60%), Gaps = 4/456 (0%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEF-TRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP + +S R + + + F + +G P+++T+ L+ C S L +G
Sbjct: 75 NPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGS--LDMG 132
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
HG + + G D ++V V +L+ MY+ G + A+ VF + +W +M+ GY++
Sbjct: 133 IQAHGQIIRHGFD-SDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIK 191
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
GD+ SA ++FD+MP ++ ++W+ +++G+ K +F++A+E + +Q GV + ++SV
Sbjct: 192 SGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSV 251
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
+ +CA++G L +G H Y+L+ N+ + L+D+Y+RCG I+ A VF ++ R
Sbjct: 252 IASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDA 311
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+SW ++I GFA++G+ +ALEYF+ M+K G P ++FT L+ACSH GL+E GL F+
Sbjct: 312 LSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFES 371
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
MK+ YR+ PR+EHYGC+VDL RAG+L +A V MPMKPN + G+LL ACR +
Sbjct: 372 MKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSE 431
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
+AER K L++L P YVLL+N+YA KW+ IR+ MK RG+ K PG + E+
Sbjct: 432 IAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMD 491
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV 497
+H+F GD++H E + I M E + ++L GY
Sbjct: 492 GKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYT 527
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 142/311 (45%), Gaps = 42/311 (13%)
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A +FD F + +I + + ++ A ++F ++ + + + + GF
Sbjct: 41 AHTIFDV------FAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDP 94
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
+++ + + + +G+ PD +T ++ AC G+L +G+ H +++ F +V V N+L
Sbjct: 95 DKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSL 154
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIV--------------------------- 289
+ +YS G I+ A VF+R+ +VSW S++
Sbjct: 155 VTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWS 214
Query: 290 ----GFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
G+A N F +A+E + +Q EG + + +C+H G +E G R D + +
Sbjct: 215 VMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILR- 273
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+++ + +VD+Y+R G ++ A+ V + +P + + + +L+A G AE+
Sbjct: 274 NKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGR-DALSWTTLIAGFAMHG---YAEK 329
Query: 406 LMKYLVDLDPG 416
++Y ++
Sbjct: 330 ALEYFSRMEKA 340
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 117/262 (44%), Gaps = 18/262 (6%)
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+S L +C + L I IH ++++ +V + LI + +++A QVF ++
Sbjct: 19 LSFLESCTTLSHLKI---IHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQN 75
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR- 337
L +NS I GF+ + ++ ++ ++ G PD +++ + AC+ G ++ G++
Sbjct: 76 PNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQA 135
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
+ I++ + +++ +V +YS G ++ A V + + V S++A
Sbjct: 136 HGQIIRHGFDSDVYVQN--SLVTMYSTLGDIKSASYVFRRISC-LDVVSWTSMVAGYIKS 192
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANM---YAAVGKWDGAGKIRRTMKGRGIQKKPG 454
GD+ A +L D + N V + M YA +D A ++ ++ G+
Sbjct: 193 GDVTSARKL------FDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANET 246
Query: 455 LSSIEIGSGIH--EFMAGDRSH 474
+ I S H G+R+H
Sbjct: 247 VMVSVIASCAHLGALELGERAH 268
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 272/456 (59%), Gaps = 5/456 (1%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHG--TNPNHITFITLLSGCADFPSQ 96
+S V W + I + RSG EA F R+ G P+ +T I +SGCA
Sbjct: 181 ESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGD- 239
Query: 97 CLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMI 156
L LG +H V G+ R V + A++DMY K G ++LA VF+ + K+ +W MI
Sbjct: 240 -LELGKRLHEFVDSKGV-RCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMI 297
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
G+ R G +E A +FDEMP RD W AL+ G+V+ +EA+ F EMQ S V+P+ +
Sbjct: 298 VGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEI 357
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T++++L+AC+ +G L +G+W+H Y+ + +V + +L+D+Y++CG I+ A +F+ +
Sbjct: 358 TMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEI 417
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+ ++W ++I G A +G EA+EYF M G +PD ++F G L+AC HAGL+++G
Sbjct: 418 PDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGR 477
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
++F +M + Y + +++HY C++DL RAG L++A +V MPM P+ VV G+L ACR
Sbjct: 478 QFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRM 537
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
G+I L E+ LV+LDP YVLLANMYA A K+R M+ G++K PG S
Sbjct: 538 HGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCS 597
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
IE+ +HEF+ D+SH+++ IY L ++ +K
Sbjct: 598 CIELNGVVHEFIVKDKSHLDTIAIYDCLHGITLQMK 633
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 178/397 (44%), Gaps = 80/397 (20%)
Query: 52 ISRHCRSGRIAEAALEFTRMTLHGTN--PNHITFITLLSGCADFPSQCLFLGAMIHGLVC 109
+ RHC L R L ++ P+H+TF LL CA Q GA + G V
Sbjct: 100 VDRHC---------LPLYRALLCSSSARPDHLTFPFLLKACARL--QYRPYGAAVLGHVQ 148
Query: 110 KLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAV 169
KLG + F NA + + G + A
Sbjct: 149 KLGFSAD--------------------------------VFVVNAGVHFWSVSGSMVLAR 176
Query: 170 RMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG--VEPDYVTIISVLNACAN 227
R+FDE P RD +SW L+ G+V+ G EALE F + G V PD VT+I ++ CA
Sbjct: 177 RLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQ 236
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G L +G +H +V + + V++ N ++D+Y +CG +E A+ VF+R+ +T+VSW ++
Sbjct: 237 MGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTM 296
Query: 288 IVGFA--------------------------VNGFV-----GEALEYFNSMQKEGFKPDG 316
IVG A + G+V EA+ F+ MQ+ P+
Sbjct: 297 IVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNE 356
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
++ L+ACS G +E G+ + + +++ + +VD+Y++ G ++ A+ + +
Sbjct: 357 ITMVNLLSACSQLGALEMGMWVHHYIDR-HQLYLSVALGTSLVDMYAKCGNIKKAICIFK 415
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
+P K N + +++ G A + ++DL
Sbjct: 416 EIPDK-NALTWTAMICGLANHGHADEAIEYFQRMIDL 451
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 179/464 (38%), Positives = 280/464 (60%), Gaps = 4/464 (0%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
+++ V + WTS I+ + R+ R EA F M G P+ +T I +LS C+
Sbjct: 198 AQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKD-- 255
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM-RVKSSFTWNAMI 156
L LG +H LV + G+ + +V AL+DMYAK G A VFDA+ R + +WNA+I
Sbjct: 256 LELGCSLHSLVKEKGMSMSENLV-VALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAII 314
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
DGY + G ++ A +FD+M VRD I++ +++ G++ G EAL F M+ + D
Sbjct: 315 DGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNF 374
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T++S+L+ACA++G L G +H + + + ++ + L+D+Y +CG + A VFQRM
Sbjct: 375 TVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRM 434
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
KR + +W ++I G A NG LEYF M+ +GF+P+ VS+ LTACSH+ L+ +G
Sbjct: 435 GKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGR 494
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
YFD M+ +Y + P+IEHYGC++DL R+G L++A+++V+ MPM+PN V+ S+L+ACR
Sbjct: 495 LYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSACRV 554
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
I LA+ ++L+ ++P D+ YV L N+ KW+ A KIR M+ R ++K G S
Sbjct: 555 HKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKKTAGYS 614
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
S+ + +H+F+ D+SH I +MLE +S LK GY P T
Sbjct: 615 SVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSAGYSPIT 658
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 199/422 (47%), Gaps = 42/422 (9%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLS---GCADFPSQCLFLG 101
+ W S +S + G + EA +M HG P+ +F++LL+ D+ LG
Sbjct: 962 VISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQ-----LG 1016
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHG+V KLG ++V V T L+DMY K FD
Sbjct: 1017 VQIHGIVHKLGFSCSSVHVQTTLIDMYGK-------CCCFD------------------- 1050
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
++ +F+E+P +L+ ++ F+ ALE M + GV PD VT +
Sbjct: 1051 -----HSLAIFNEIPSIALECCNSLITSSLRCNMFDAALEILHCMIVEGVTPDDVTFSAT 1105
Query: 222 LNACANVGT--LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+ A + + L +H ++K F+ ++ VC++LI Y+ G + + +F+ +
Sbjct: 1106 MKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDP 1165
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
++ + +II A G A+E F+ M G KPD V+F A+ C AG+ E+G
Sbjct: 1166 NVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVI 1225
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
++M+ + P H+ C+V+L SR G +++A+ ++E P++ SLL +C+ G+
Sbjct: 1226 ELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGE 1285
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+L +R L+D+ + + ++N + +G + A +I+ + + KK G S IE
Sbjct: 1286 NVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNVKEV-KKSGHSLIE 1344
Query: 460 IG 461
+
Sbjct: 1345 VS 1346
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 158/343 (46%), Gaps = 34/343 (9%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F RM P+ TF L C+ L M+H + L V +L+ M
Sbjct: 94 FRRMRRAAVRPDGFTF-HFLFKCSSSSRPRALLCTMLHAACLRTMLPSAAPFVANSLIHM 152
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y + G FD + VK + +W +I G + G + A + + PVRD ISWT+L+
Sbjct: 153 YTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLI 212
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
+ + +EA++CF+ M G+ PD VT+I VL+AC+ + L +G +H V ++
Sbjct: 213 AAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMS 272
Query: 248 DNVKVCNTLIDLYSRCG----------------------------C----IEFARQVFQR 275
+ + LID+Y++CG C ++ AR +F +
Sbjct: 273 MSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQ 332
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M R ++++NS+I G+ +G + EAL F +M++ + D + L+AC+ G + G
Sbjct: 333 MEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQG 392
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
R ++ V I ++D+Y + GR+ +A V + M
Sbjct: 393 -RALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRM 434
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 165/381 (43%), Gaps = 54/381 (14%)
Query: 136 LATVVFDAMRVKSS-FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
L VV A + S+ F N+++D Y GD V+ +++ D ISW ++L+ + RG
Sbjct: 917 LHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRG 976
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK-DNVKVC 253
+ +EA+ ++M G P + +S+L G +G+ IH V K F +V V
Sbjct: 977 HMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQ 1036
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
TLID+Y +C C + + +F + L NS+I ALE + M EG
Sbjct: 1037 TTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLRCNMFDAALEILHCMIVEGVT 1096
Query: 314 PDGVSFTG-----------ALTACS--HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
PD V+F+ +LT+C H+ L++ G F++ + S I Y C
Sbjct: 1097 PDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLG---FEMDMAV--CSSLITAYAC--- 1148
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
AG+L + + E + + PN + ++++AC GD A L +V G+ +
Sbjct: 1149 ----AGQLSSSHLIFEGL-LDPNVICFTAIISACARYGDGARAMELFDQMV--SSGLKPD 1201
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHI 480
V A+ D AG +GR + IE+ E +R H
Sbjct: 1202 NV---TFLCAIAGCDQAGMFE---EGRLV--------IELMRASRELDPDER------HF 1241
Query: 481 YSMLELLSFDLKLCGYVPETV 501
M+ LLS D G+V E +
Sbjct: 1242 ACMVNLLSRD----GFVKEAM 1258
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 138/347 (39%), Gaps = 44/347 (12%)
Query: 39 KSTVNPTVQWTSSISR----HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFP 94
+S+V V+ +S++R R G A + M G TF T+L C+ +
Sbjct: 752 RSSVTMAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYE 811
Query: 95 SQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNA 154
+ +HG V LGL N F +A
Sbjct: 812 A------LQLHGRVLALGLCCN--------------------------------PFVGSA 833
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+++ YM +++ +F E+P+++ +L G EE + CF +M+ +E +
Sbjct: 834 LVNHYMHVESPHASLSLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELN 893
Query: 215 YVTIISVLNACANVGT-LGIGLWIHRYVLKQDF-KDNVKVCNTLIDLYSRCGCIEFARQV 272
++ + C G L G +H VLK + N+ + N+L+DLYS G +
Sbjct: 894 GLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKA 953
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
+ ++SWNSI+ +A G + EA+ Y M G P SF L G
Sbjct: 954 LNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDW 1013
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
+ G++ I+ K+ + ++D+Y + + +L + +P
Sbjct: 1014 QLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIP 1060
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 117/285 (41%), Gaps = 15/285 (5%)
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
M VRD S ++ GF++ G + A +R M SG+ T ++L C+
Sbjct: 757 MAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYE----A 812
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
L +H VL N V + L++ Y + +F+ + + N ++ G
Sbjct: 813 LQLHGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLRGLGNL 872
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG-LIEDGLRYFDIMKKIYRVSPRIE 353
E + F M+++ + +G+S+ A+ C G +E G + ++ K + I
Sbjct: 873 KLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIF 932
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV-- 411
+VDLYS G D + + ++ + + + S+L+ +G + A +K ++
Sbjct: 933 LSNSLVDLYSAIGDSVDTVKALNDI-LSEDVISWNSILSMYADRGHMKEAVYYLKQMLWH 991
Query: 412 DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
P + S LLA + G W +I GI K G S
Sbjct: 992 GKMPSIRSFVSLLA-LSGKTGDWQLGVQI------HGIVHKLGFS 1029
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 170/429 (39%), Positives = 266/429 (62%), Gaps = 35/429 (8%)
Query: 73 LHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFG 132
L P+ +T ++L+ CA + L G ++H +LGLD N + V A+LDMY
Sbjct: 4 LDNLRPDEVTMVSLVPACAQLGN--LERGKLLHSYSKELGLDEN-LSVNNAILDMYC--- 57
Query: 133 RMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVK 192
+ DIESA +F+ + +D +SWT++L+G K
Sbjct: 58 ----------------------------KCDDIESAQEVFNRIREKDVLSWTSMLSGLAK 89
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
GYF+E+L FR+MQ+ +EPD +T++ VL+ACA G L G +IH + K + ++ +
Sbjct: 90 SGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVL 149
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
L+D+Y++CG I+ A QVF+RM R + +WN++I G A++G +A+ F+ M+ +
Sbjct: 150 ETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKL 209
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
PD V+F L ACSHAGL+++GL F MK +++ PR+EHYGC+VDL RA +++DAL
Sbjct: 210 MPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDAL 269
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
+ENMP+K N V+ +LL ACR+ G LAE++ + +++L+P YV+L+N+YA V
Sbjct: 270 AFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXRRVIELEPDSCGRYVMLSNLYAGVS 329
Query: 433 KWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+WD A K+R+ MK +GI+K PG S IE+ IH+F+AGDRSH+++E IY+M+E ++ +
Sbjct: 330 QWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVN 389
Query: 493 L-CGYVPET 500
L G+VP T
Sbjct: 390 LDGGHVPGT 398
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 94/167 (56%), Gaps = 7/167 (4%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ WTS +S +SG E+ F +M LH P+ IT + +LS CA + L G I
Sbjct: 77 VLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQ--TGALDQGKYI 134
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H L+ K ++ ++++ TAL+DMYAK G +DLA VF MRV++ FTWNAMI G G
Sbjct: 135 HLLIDKFEIN-CDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGH 193
Query: 165 IESAVRMFDEMP----VRDAISWTALLNGFVKRGYFEEALECFREMQ 207
E A+ +FD+M + D +++ ALL G +E L F+ M+
Sbjct: 194 GEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMK 240
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 158/440 (35%), Positives = 267/440 (60%), Gaps = 6/440 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ +S + + G E+ F +M P+ + +T+LS C LG +H
Sbjct: 334 VSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLED--FDLGRSVH 391
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ G+ + + G ALLD+YAK G++D A F+ + KS+ +WN+M+DG+ R G +
Sbjct: 392 AFIVTYGMLVDGFL-GNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGV 450
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A F+++P +D +SW ++N +VK F E+ E F +MQ S V+PD T+IS+L++C
Sbjct: 451 DKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSC 510
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A VG L G+W++ Y+ K + + + LID+Y +CGC+E A ++F ++ ++ + W
Sbjct: 511 AKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWT 570
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+++ +A+ G EA++ + M++ G KPD V+F L ACSH GL+++G +YF+ ++
Sbjct: 571 AMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSF 630
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P I HYGC+VDL R G LE+ + +E MP++P+ + SL+ ACR+ ++ LAE+
Sbjct: 631 YNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQ 690
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
K L+++DP + +VLL+N+YA G+WD K+R + G+ K+PG + IE +H
Sbjct: 691 AFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVH 750
Query: 466 EFMAGDRSHIESEHIYSMLE 485
EF+A S++ S I ML+
Sbjct: 751 EFVA---SNLVSADILCMLQ 767
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 207/426 (48%), Gaps = 42/426 (9%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K T + W + IS + G EA F M + G P+ IT ++L+S CA L
Sbjct: 193 KMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKD--L 250
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVF---DAMRVKSSFTWNAM 155
+G +H + L ++ L+DMY+K G+MD A + D V W +
Sbjct: 251 EMGKRLHLYIVDNKLWIRGSLLN-CLVDMYSKCGKMDEAHGLLSRCDESEVDVVL-WTTL 308
Query: 156 IDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
+ GY++ I+ A ++FD+M R +SWT +++G+V+ GY+ E+LE F++M+ V PD
Sbjct: 309 VSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDE 368
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
V +++VL+AC ++ +G +H +++ + + N L+DLY++CG ++ A + F++
Sbjct: 369 VALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQ 428
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFN------------------------------ 305
+ ++ SWNS++ GF +G V +A ++FN
Sbjct: 429 LPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIF 488
Query: 306 -SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
MQ KPD + L++C+ G + G+ + ++ + + ++D+Y +
Sbjct: 489 CKMQSSNVKPDKTTLISLLSSCAKVGALNHGI-WVNVYIEKNEIGIDAMLGTALIDMYGK 547
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLL 424
G +E A + + ++ N V +++AA +G + A L YL + GV ++V
Sbjct: 548 CGCVEMAYEIFTQI-IEKNVFVWTAMMAAYAMEGQALEAIDL--YLEMEERGVKPDHVTF 604
Query: 425 ANMYAA 430
+ AA
Sbjct: 605 IALLAA 610
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 190/446 (42%), Gaps = 104/446 (23%)
Query: 12 QPFLP-HQQNPNQNLTTTPQISIQT-------NN--------SKSTVNPTVQWTSSISRH 55
+ F P H NL P+I+ Q NN S S ++ W + +
Sbjct: 49 REFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENK 108
Query: 56 CRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA-DFPSQCLFLGAMIHGLVCKLGLD 114
+ G E + M G + TF L+ C +F + LG+ +HG + K G
Sbjct: 109 LKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVK---LGSEVHGRILKCGFG 165
Query: 115 RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDE 174
RN + L+ +Y+K G++ +F+ M + +WN MI Y+ +G A+ +FDE
Sbjct: 166 RNKSL-NNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDE 224
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
M V SGV PD +T++S+++ CA + L +G
Sbjct: 225 MLV-------------------------------SGVLPDEITMVSLVSTCAKLKDLEMG 253
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCG-----------C------------------ 265
+H Y++ + N L+D+YS+CG C
Sbjct: 254 KRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYV 313
Query: 266 ----IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
I+ ARQ+F +M++R+LVSW +++ G+ G+ E+LE F M+ E PD V+
Sbjct: 314 KSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVT 373
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV---------DLYSRAGRLEDAL 372
L+AC H +ED FD+ + ++ I YG +V DLY++ G+L++AL
Sbjct: 374 VLSACVH---LED----FDLGRSVHAF---IVTYGMLVDGFLGNALLDLYAKCGKLDEAL 423
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKG 398
E +P K L CR+ G
Sbjct: 424 RTFEQLPCKSAASWNSMLDGFCRSGG 449
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 118/231 (51%), Gaps = 9/231 (3%)
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIH 238
++I W LL +K G +E LEC+ M GV D T +++AC + +G +H
Sbjct: 97 ESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVH 156
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
+LK F N + N L+ LYS+CG ++ Q+F++M R ++SWN++I + + G
Sbjct: 157 GRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYR 216
Query: 299 EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG-- 356
EAL+ F+ M G PD ++ ++ C+ +E G R +Y V ++ G
Sbjct: 217 EALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRL-----HLYIVDNKLWIRGSL 271
Query: 357 --CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
C+VD+YS+ G++++A ++ +VVL + L + K + I R
Sbjct: 272 LNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKAR 322
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 107/254 (42%), Gaps = 37/254 (14%)
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
II +L +C+N+ IH +++ + + ++ + ++ ++ A Q+ H
Sbjct: 38 IIDLLKSCSNIREFSP---IHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSH 94
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS---------- 327
+ + WN+++ G E LE + M +G D +F + AC
Sbjct: 95 EPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSE 154
Query: 328 -HAGLIEDGL--------------RYFDIMKKIYRVSPRIEH-----YGCIVDLYSRAGR 367
H +++ G +K++ ++ ++ H + ++ Y G
Sbjct: 155 VHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGM 214
Query: 368 LEDALNVVENMPMK---PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV-L 423
+AL++ + M + P+E+ + SL++ C D+ + +RL Y+VD + + +
Sbjct: 215 YREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNC 274
Query: 424 LANMYAAVGKWDGA 437
L +MY+ GK D A
Sbjct: 275 LVDMYSKCGKMDEA 288
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 183/456 (40%), Positives = 273/456 (59%), Gaps = 5/456 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W I S + L + RM N TF +LL C++ + I
Sbjct: 80 TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA--FEETTQI 137
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + KLG + N+V +L++ YA G LA ++FD + +WN++I GY++ G
Sbjct: 138 HAQITKLGYE-NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 196
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ A+ +F +M ++AISWT +++G+V+ +EAL+ F EMQ S VEPD V++ + L+A
Sbjct: 197 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 256
Query: 225 CANVGTLGIGLWIHRYVLKQDFK-DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
CA +G L G WIH Y+ K + D+V C LID+Y++CG +E A +VF+ + K+++ +
Sbjct: 257 CAQLGALEQGKWIHSYLNKTRIRMDSVLGC-VLIDMYAKCGEMEEALEVFKNIKKKSVQA 315
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W ++I G+A +G EA+ F MQK G KP+ ++FT LTACS+ GL+E+G F M+
Sbjct: 316 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ Y + P IEHYGCIVDL RAG L++A ++ MP+KPN V+ G+LL ACR +I L
Sbjct: 376 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 435
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E + + L+ +DP YV AN++A KWD A + RR MK +G+ K PG S+I +
Sbjct: 436 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGT 495
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
HEF+AGDRSH E E I S ++ L+ GYVPE
Sbjct: 496 THEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPE 531
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 138/287 (48%), Gaps = 17/287 (5%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL---ATVVFDAMRVKSSFTWNAMIDGYM 160
IH + K GL +++ + T L D A +VFD +F WN MI G+
Sbjct: 33 IHARMLKTGLMQDSYAI-TKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFS 91
Query: 161 RRGDIESAVRMFDEM----PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
+ E ++ ++ M +A ++ +LL FEE + ++ G E D
Sbjct: 92 CSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVY 151
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+ S++N+ A G + H + D+V N++I Y + G ++ A +F++M
Sbjct: 152 AVNSLINSYAVTGNFKLA---HLLFDRIPEPDDVS-WNSVIKGYVKAGKMDIALTLFRKM 207
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
++ +SW ++I G+ EAL+ F+ MQ +PD VS AL+AC+ G +E G
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 337 RYFDIMKKIYRVSPRIEH-YGCI-VDLYSRAGRLEDALNVVENMPMK 381
+ K R+ R++ GC+ +D+Y++ G +E+AL V +N+ K
Sbjct: 268 WIHSYLNKT-RI--RMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 311
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 279/454 (61%), Gaps = 3/454 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ I+ ++ EA F M G + + ++ LS CA+ + +G +IH
Sbjct: 342 VTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANL--LVVNMGKLIH 399
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L K+G + + + + AL+ MY+K G + +A +FD + +WN+MI GY++ +
Sbjct: 400 SLSLKIGTE-SYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLV 458
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
++A +FD MP +D +SW+++++G+ + F+E L F+EMQ+SG +PD T++SV++AC
Sbjct: 459 DNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISAC 518
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A + L G W+H Y+ + NV + TLID+Y +CGC+E A +VF M ++ + +WN
Sbjct: 519 ARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWN 578
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I+G A+NG V +L+ F++M+K P+ ++F G L AC H GL+++G +F M
Sbjct: 579 ALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHD 638
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+++ P ++HYGC+VDL RAG+L++A ++ MPM P+ G+LL AC+ GD + R
Sbjct: 639 HKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRR 698
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ + L++L P D +VLL+N+YA+ GKWD +IR M + K PG S IE IH
Sbjct: 699 VGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIH 758
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
EF+AGD++H + + I ML ++ LKL GY P+
Sbjct: 759 EFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPD 792
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 167/376 (44%), Gaps = 70/376 (18%)
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLAT 138
++ T+ L+ C+ S+ + +H V KLG D ++V V L++ ++ M A
Sbjct: 212 DNYTYPLLIQACSIRRSE--WEAKQVHNHVLKLGFD-SDVYVRNTLINCFSVCSNMTDAC 268
Query: 139 VVFDAMRVKSSFTWNAMIDGYMRRGDIESA------------------------------ 168
VF+ V S +WN+++ GY+ G++E A
Sbjct: 269 RVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVE 328
Query: 169 -VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
++FDEM +D ++W+AL+ F + +EEA+ F M GV D V +S L+ACAN
Sbjct: 329 ACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACAN 388
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS- 286
+ + +G IH LK + + + N LI +YS+CG I AR++F + L+SWNS
Sbjct: 389 LLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSM 448
Query: 287 ------------------------------IIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
+I G+A N E L F MQ GFKPD
Sbjct: 449 ISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDE 508
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
+ ++AC+ +E G ++ K ++ + ++D+Y + G +E AL V
Sbjct: 509 TTLVSVISACARLAALEQG-KWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY 567
Query: 377 NMPMKP----NEVVLG 388
M K N ++LG
Sbjct: 568 GMIEKGISTWNALILG 583
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 192 KRGYFEE-----ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
+R Y + A ++ M + + D T ++ AC+ + +H +VLK F
Sbjct: 185 RRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGF 244
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
+V V NTLI+ +S C + A +VF VSWNSI+ G+ G V EA ++
Sbjct: 245 DSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQ 304
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M + ++ + GL+ + + FD M + V+ + ++ + +
Sbjct: 305 MPERSI----IASNSMIVLFGMRGLVVEACKLFDEMLEKDMVT-----WSALIACFQQNE 355
Query: 367 RLEDALNVVENMP---MKPNEVVLGSLLAAC 394
E+A+ M + +EVV S L+AC
Sbjct: 356 MYEEAIRTFVGMHKIGVMVDEVVAVSALSAC 386
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 175/444 (39%), Positives = 262/444 (59%), Gaps = 3/444 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV W + I + S EA L + +M H N TF LL C+ + L I
Sbjct: 76 TVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSA--LAETHQI 133
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K G + V +LL +YA G + A V+FD + + +WN MIDGY++ G+
Sbjct: 134 HVQIIKRGFG-SEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGN 192
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A ++F MP ++ ISWT+++ GFV+ G +EAL ++M ++G++PD +T+ L+A
Sbjct: 193 VEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSA 252
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA +G L G WIH Y+ K K + + LID+Y +CG ++ A VF ++ K+ + +W
Sbjct: 253 CAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTW 312
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+II GFAV+G EAL++F MQK G KP +FT LTACSH GL+E+G F+ M
Sbjct: 313 TAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMST 372
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P +EHYGC+VDL RAG L++A VE+MP+KPN + GSLL AC + L +
Sbjct: 373 FYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGK 432
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ K+L++LDP D Y+ LA+++AA G+WD A ++R +K +G+ PG S+I +
Sbjct: 433 EIGKFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNGVA 492
Query: 465 HEFMAGDRSHIESEHIYSMLELLS 488
HEF AG H +Y M L++
Sbjct: 493 HEFFAGAEPHPHVREMYDMSNLIA 516
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 138/287 (48%), Gaps = 18/287 (6%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYA--KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHG + K G R+ + V + LL YA +F + A +VFD + ++ WN MI Y
Sbjct: 30 IHGQLLKKGTIRHKLTV-SRLLTTYASMEFSNLTYARMVFDRISSPNTVMWNTMIRAYSN 88
Query: 162 RGDIESAVRMFDEM-----PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
D E A+ ++ +M P +A ++ LL E + ++ G +
Sbjct: 89 SNDPEEALLLYHQMLHHSIP-HNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVY 147
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
S+L A G++ + + +D + NT+ID Y +CG +E A ++FQ M
Sbjct: 148 ATNSLLRVYAISGSIKSAHVLFDLLPSRD----IVSWNTMIDGYIKCGNVEMAYKIFQAM 203
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG- 335
++ ++SW S+IVGF G EAL M G KPD ++ + +L+AC+ G +E G
Sbjct: 204 PEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGK 263
Query: 336 LRYFDIMKKIYRVSPRIEHYGC-IVDLYSRAGRLEDALNVVENMPMK 381
+ I K ++ P + GC ++D+Y + G ++ AL V + K
Sbjct: 264 WIHTYIGKNKIKIDPVL---GCALIDMYVKCGEMKKALLVFSKLEKK 307
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 175/420 (41%), Positives = 257/420 (61%), Gaps = 5/420 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+++M LH PN TF L S C S L G M+H K G + + + TALLDM
Sbjct: 71 YSQMLLHSFLPNQHTFNFLFSACTSLSSPSL--GQMLHTHFIKSGFEPD-LFAATALLDM 127
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y K G ++LA +FD M V+ TWNAM+ G+ R GD++ A+ +F MP R+ +SWT ++
Sbjct: 128 YTKVGTLELARKLFDQMPVRGVPTWNAMMAGHARFGDMDVALELFRLMPSRNVVSWTTMI 187
Query: 188 NGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
+G+ + + EAL F M Q G+ P+ VT+ S+ A AN+G L IG + Y K F
Sbjct: 188 SGYSRSKKYGEALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEIGQRVEAYARKNGF 247
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK-RTLVSWNSIIVGFAVNGFVGEALEYFN 305
N+ V N ++++Y++CG I+ A +VF + R L SWNS+I+G AV+G + L+ ++
Sbjct: 248 FKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLAVHGECCKTLKLYD 307
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
M EG PD V+F G L AC+H G++E G F M + + P++EHYGC+VDL RA
Sbjct: 308 QMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPKLEHYGCMVDLLGRA 367
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLA 425
G+L +A V++ MPMKP+ V+ G+LL AC ++ LAE + L L+P NYV+L+
Sbjct: 368 GQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLFALEPWNPGNYVILS 427
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
N+YA+ G+WDG K+R+ MKG I K G S IE G +H+F+ DRSH ES I+++L+
Sbjct: 428 NIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIEEGGQLHKFIVEDRSHPESNEIFALLD 487
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 121/290 (41%), Gaps = 42/290 (14%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE-EALECFREMQISGVEP 213
+I+ + ++ A ++ P + L+ + + + + +M + P
Sbjct: 22 LIEKLLEIPNLHYAHKVLHHSPKPTLFLYNKLIQAYSSHPQHQHQCFSLYSQMLLHSFLP 81
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
+ T + +AC ++ + +G +H + +K F+ ++ L+D+Y++ G +E AR++F
Sbjct: 82 NQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGFEPDLFAATALLDMYTKVGTLELARKLF 141
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
+M R + +WN+++ G A G + ALE F M + VS+T ++ S
Sbjct: 142 DQMPVRGVPTWNAMMAGHARFGDMDVALELFRLMPSR----NVVSWTTMISGYS------ 191
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
R + YG + L+ L + + M PN V L S+ A
Sbjct: 192 -----------------RSKKYGEALGLF---------LRMEQEKGMMPNAVTLASIFPA 225
Query: 394 CRTKGDIILAERLMKYLVD---LDPGVDSNYVLLANMYAAVGKWDGAGKI 440
G + + +R+ Y SN VL MYA GK D A K+
Sbjct: 226 FANLGALEIGQRVEAYARKNGFFKNLYVSNAVL--EMYAKCGKIDVAWKV 273
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 180/462 (38%), Positives = 281/462 (60%), Gaps = 4/462 (0%)
Query: 40 STVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
S + WT IS + R+GR AEA F M G P+ +T I LLS CA L
Sbjct: 197 SPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKD--LV 254
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM-RVKSSFTWNAMIDG 158
G +H LV + G+ + +V AL+DMYAK G + A VFDA+ R + +WNAMIDG
Sbjct: 255 FGRSLHKLVGEKGMLMSGKLV-VALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDG 313
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + G ++ A +FD+M RD +++ +L+ G++ G EAL F +M+ + D T+
Sbjct: 314 YCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTM 373
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+S+L ACA++G L G +H + ++ + ++ + L+D+Y +CG +E A VFQ M
Sbjct: 374 VSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSV 433
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R + +W+++I G A NG ALEYF M+ +GF+P+ V++ LTACSH+ L+++G Y
Sbjct: 434 RDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLY 493
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F+ M+ ++ + P IEHYGC++DL R+G L++A+++V MPM+PN V+ S+L+ACR
Sbjct: 494 FEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHK 553
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
D LA ++L+ L+P D+ YV L N+Y +W+ A +IRR M+ RG++K G SSI
Sbjct: 554 DANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSI 613
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ +H+F+ DR+H + I +M+E ++ LK GY P T
Sbjct: 614 TVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPIT 655
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 161/346 (46%), Gaps = 34/346 (9%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ RM G + TF L CA + L L M+H + L +V ++ M
Sbjct: 91 YRRMRRTGVCTDAFTFHFLFKCCARGRAHVL-LCQMLHAACFRTMLPSAVPLVSNPIIHM 149
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y + G A FD + VK + W +I G + G ++ A + P R+ ISWT L+
Sbjct: 150 YVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLI 209
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
+G+ + G EA++CF M G+EPD VT+I +L+ACA + L G +H+ V ++
Sbjct: 210 SGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGML 269
Query: 248 DNVKVCNTLIDLYSRCG----------------------------C----IEFARQVFQR 275
+ K+ LID+Y++CG C ++ AR +F +
Sbjct: 270 MSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQ 329
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M R LV++NS+I G+ G + EAL F M++ + D + LTAC+ G + G
Sbjct: 330 MEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQG 389
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
R + V I ++D+Y + GR+E+A V + M ++
Sbjct: 390 -RALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVR 434
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 35/198 (17%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A+ +FD MP + TAL F E L +R M+ +GV D T +
Sbjct: 53 LRYALCLFDRMPCSTFLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKC 112
Query: 225 CANVGTLGIGLW-----------------------IHRYV-------LKQDFKD----NV 250
CA G + L IH YV ++ F D +
Sbjct: 113 CAR-GRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDA 171
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
T+I ++ G ++ A + + R ++SW +I G++ G EA++ FNSM +
Sbjct: 172 VAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSD 231
Query: 311 GFKPDGVSFTGALTACSH 328
G +PD V+ G L+AC+
Sbjct: 232 GIEPDEVTVIGLLSACAQ 249
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 166/414 (40%), Positives = 260/414 (62%), Gaps = 4/414 (0%)
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLAT 138
+ T+ LL C + LG +H V + G + ++ +V +L++MY + G + LA
Sbjct: 116 DRFTYPFLLKACGGLAAS--QLGRQVHAHVARSGCE-SHAIVQNSLIEMYTRCGDLSLAR 172
Query: 139 VVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE 198
VFD MR K + +WN +I + R G + A +F MP + +SWTAL++G+ G F
Sbjct: 173 KVFDGMREKDAVSWNTLISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAG 232
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
A+E FR+MQ+ G EPD V+I++VL ACA +G L +G WI+ Y K + +CN L++
Sbjct: 233 AVEVFRQMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALME 292
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGV 317
+Y++CGCIE A Q+F M ++ ++SW++ I G A +G EA++ F M +EG P+G+
Sbjct: 293 MYAKCGCIEEALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGI 352
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
+F G L+ACSHAGL+++GLRYFD MK+ Y V P +EHYGC+VDL R+GR++ AL+ +
Sbjct: 353 TFVGLLSACSHAGLLDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGG 412
Query: 378 MPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGA 437
MP+ P+ + GSLL+ACR+ D+ A + LV+L+P N V+LAN+YAA G+W
Sbjct: 413 MPIPPDGKIWGSLLSACRSHSDVDTAVVAAERLVELEPEDVGNLVMLANVYAAAGRWGNV 472
Query: 438 GKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
R+ ++ R +K PG S IE+ + + EF+AG+ E I +++++L+ L
Sbjct: 473 ASTRKEIRSRSTRKTPGCSMIEVDNVVREFVAGEDLGPELGGIAAIIDILASQL 526
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 40/206 (19%)
Query: 45 TVQWTSSISRHCRSGRIAEA------------------------------ALE-FTRMTL 73
V W + IS H R G++ +A A+E F +M +
Sbjct: 183 AVSWNTLISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQM 242
Query: 74 HGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR 133
G P+ ++ + +L CA + L LG I+ K G+ + + AL++MYAK G
Sbjct: 243 EGFEPDDVSIVAVLPACAQLGA--LELGRWIYAYCNKHGM-LGKIYICNALMEMYAKCGC 299
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP-----VRDAISWTALLN 188
++ A +F M K +W+ I G G AV++F+ M + + I++ LL+
Sbjct: 300 IEEALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLS 359
Query: 189 GFVKRGYFEEALECFREMQIS-GVEP 213
G +E L F M+ GVEP
Sbjct: 360 ACSHAGLLDEGLRYFDRMKEEYGVEP 385
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 179/464 (38%), Positives = 280/464 (60%), Gaps = 4/464 (0%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
+++ V + WTS I+ + R+ R EA F M G P+ +T I +LS C+
Sbjct: 136 AQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKD-- 193
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM-RVKSSFTWNAMI 156
L LG +H LV + G+ + +V AL+DMYAK G A VFDA+ R + +WNA+I
Sbjct: 194 LELGCSLHLLVKEKGMSMSENLV-VALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAII 252
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
DGY + G ++ A +FD+M VRD I++ +++ G++ G EAL F M+ + D
Sbjct: 253 DGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNF 312
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T++S+L+ACA++G L G +H + + + ++ + L+D+Y +CG + A VFQRM
Sbjct: 313 TVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRM 372
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
KR + +W ++I G A NG LEYF M+ +GF+P+ VS+ LTACSH+ L+ +G
Sbjct: 373 GKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGR 432
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
YFD M+ +Y + P+IEHYGC++DL R+G L++A+++V+ MPM+PN V+ S+L+ACR
Sbjct: 433 LYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSACRV 492
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
I LA+ ++L+ ++P D+ YV L N+ KW+ A KIR M+ R ++K G S
Sbjct: 493 HKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKKTAGYS 552
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
S+ + +H+F+ D+SH I +MLE +S LK GY P T
Sbjct: 553 SVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSAGYSPIT 596
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 198/421 (47%), Gaps = 42/421 (9%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLS---GCADFPSQCLFLG 101
+ W S +S + G + EA +M HG P+ +F++LL+ D+ LG
Sbjct: 900 VISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQ-----LG 954
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHG+V KLG ++V V T L+DMY K FD
Sbjct: 955 VQIHGIVHKLGFSCSSVHVQTTLIDMYGK-------CCCFD------------------- 988
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
++ +F+E+P +L+ + F+ ALE M + GV PD VT +
Sbjct: 989 -----HSLAIFNEIPSIALECCNSLITSSLGCNMFDAALEILHCMIVEGVTPDDVTFSAT 1043
Query: 222 LNACANVGT--LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+ A + + L +H ++K F+ ++ VC++LI Y+ G + + +F+ +
Sbjct: 1044 MKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDP 1103
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
++ + +II A G A+E F+ M G KPD V+F A+ C AG+ E+G
Sbjct: 1104 NVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVI 1163
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
++M+ + P H+ C+V+L SR G +++A+ ++E P++ SLL +C+ G+
Sbjct: 1164 ELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGE 1223
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+L +R L+D+ + + ++N + +G + A +I+ + + KK G S IE
Sbjct: 1224 NVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNVKEV-KKSGHSLIE 1282
Query: 460 I 460
+
Sbjct: 1283 V 1283
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 158/343 (46%), Gaps = 34/343 (9%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F RM P+ TF L C+ L M+H + L V +L+ M
Sbjct: 32 FRRMRRAAVRPDGFTF-HFLFKCSSSSRPRALLCTMLHAACLRTMLPSAAPFVANSLIHM 90
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y + G FD + VK + +W +I G + G + A + + PVRD ISWT+L+
Sbjct: 91 YTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLI 150
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
+ + +EA++CF+ M G+ PD VT+I VL+AC+ + L +G +H V ++
Sbjct: 151 AAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHLLVKEKGMS 210
Query: 248 DNVKVCNTLIDLYSRCG----------------------------C----IEFARQVFQR 275
+ + LID+Y++CG C ++ AR +F +
Sbjct: 211 MSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQ 270
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M R ++++NS+I G+ +G + EAL F +M++ + D + L+AC+ G + G
Sbjct: 271 MEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQG 330
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
R ++ V I ++D+Y + GR+ +A V + M
Sbjct: 331 -RALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRM 372
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 165/381 (43%), Gaps = 54/381 (14%)
Query: 136 LATVVFDAMRVKSS-FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
L VV A + S+ F N+++D Y GD V+ +++ D ISW ++L+ + RG
Sbjct: 855 LHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRG 914
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK-DNVKVC 253
+ +EA+ ++M G P + +S+L G +G+ IH V K F +V V
Sbjct: 915 HMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQ 974
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
TLID+Y +C C + + +F + L NS+I ALE + M EG
Sbjct: 975 TTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLGCNMFDAALEILHCMIVEGVT 1034
Query: 314 PDGVSFTG-----------ALTACS--HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
PD V+F+ +LT+C H+ L++ G F++ + S I Y C
Sbjct: 1035 PDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLG---FEMDMAV--CSSLITAYAC--- 1086
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
AG+L + + E + + PN + ++++AC GD A L +V G+ +
Sbjct: 1087 ----AGQLSSSHLIFEGL-LDPNVICFTAIISACARYGDGARAMELFDQMV--SSGLKPD 1139
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHI 480
V A+ D AG +GR + IE+ E +R H
Sbjct: 1140 NV---TFLCAIAGCDQAGMFE---EGRLV--------IELMRASRELDPDER------HF 1179
Query: 481 YSMLELLSFDLKLCGYVPETV 501
M+ LLS D G+V E +
Sbjct: 1180 ACMVNLLSRD----GFVKEAM 1196
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 138/347 (39%), Gaps = 44/347 (12%)
Query: 39 KSTVNPTVQWTSSISR----HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFP 94
+S+V V+ +S++R R G A + M G TF T+L C+ +
Sbjct: 690 RSSVTMAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYE 749
Query: 95 SQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNA 154
+ +HG V LGL N F +A
Sbjct: 750 A------LQLHGRVLALGLCCN--------------------------------PFVGSA 771
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+++ YM +A+ +F E+P+++ +L G EE + CF +M+ +E +
Sbjct: 772 LVNHYMHVESPHAALSLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELN 831
Query: 215 YVTIISVLNACANVGT-LGIGLWIHRYVLKQDF-KDNVKVCNTLIDLYSRCGCIEFARQV 272
++ + C G L G +H VLK + N+ + N+L+DLYS G +
Sbjct: 832 GLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKA 891
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
+ ++SWNSI+ +A G + EA+ Y M G P SF L G
Sbjct: 892 LNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDW 951
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
+ G++ I+ K+ + ++D+Y + + +L + +P
Sbjct: 952 QLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIP 998
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 15/285 (5%)
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
M VRD S ++ GF++ G + A +R M SG+ T ++L C+
Sbjct: 695 MAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYE----A 750
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
L +H VL N V + L++ Y A +F+ + + N ++ G
Sbjct: 751 LQLHGRVLALGLCCNPFVGSALVNHYMHVESPHAALSLFRELPLQNTAMCNVVLRGLGNL 810
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG-LIEDGLRYFDIMKKIYRVSPRIE 353
E + F M+++ + +G+S+ A+ C G +E G + ++ K + I
Sbjct: 811 KLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIF 870
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV-- 411
+VDLYS G D + + ++ + + + S+L+ +G + A +K ++
Sbjct: 871 LSNSLVDLYSAIGDSVDTVKALNDI-LSEDVISWNSILSMYADRGHMKEAVYYLKQMLWH 929
Query: 412 DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
P V S LLA + G W +I GI K G S
Sbjct: 930 GKMPSVRSFVSLLA-LSGKTGDWQLGVQI------HGIVHKLGFS 967
>gi|242062638|ref|XP_002452608.1| hypothetical protein SORBIDRAFT_04g028970 [Sorghum bicolor]
gi|241932439|gb|EES05584.1| hypothetical protein SORBIDRAFT_04g028970 [Sorghum bicolor]
Length = 485
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 183/480 (38%), Positives = 277/480 (57%), Gaps = 17/480 (3%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRM------TLHGTNPNHITFITLLSGCA 91
S S P + + + + CR+ +A+L R LH NP I L+ CA
Sbjct: 12 STSGFPPCTRPSKATAPRCRAAPSGDASLCAFRAHHRAGRALHA-NP---ALIPALAACA 67
Query: 92 DFPSQCLFLGAMIHGLVCKLGLDR--NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS 149
P+ + IH L+ K G+ R ++V V T+L+ YA+ GR+ A VFD M ++
Sbjct: 68 RLPA-AVAEAEQIHALLVKSGVPRTVSDVQVSTSLIRAYARLGRVCDARKVFDGMPDRTV 126
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
TWN ++D +R GD+++A +F EMP R+ +SW ++ GF + G+ +EA++ F EM ++
Sbjct: 127 VTWNVLLDALVRDGDLDAAWEVFVEMPQRNVVSWNTIIAGFTRNGWAQEAVDLFVEMTVA 186
Query: 210 -GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
G+ PD T++ ++A ++G LGIG H YVL+++F + + LI +Y+RCG +
Sbjct: 187 YGLAPDEATMVGFVSAVRDIGLLGIGKSAHGYVLRREFSLDGALGVALISMYTRCGSMGA 246
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
A F + + + W S+I GFA +G +AL F M++ G +P+GV+F L AC+H
Sbjct: 247 AHSCFLSVTTKNVEHWTSLIAGFAAHGQPEKALRLFAEMRRVGIEPNGVTFVAVLNACNH 306
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
GL+ +G +YFD+M+ + + P I+HYGC+VDL RAG L++A N+ N+P P V+
Sbjct: 307 GGLVSEGFKYFDLMRSM-GIRPMIQHYGCLVDLLGRAGFLKEAFNLASNLPEDPGFVIWS 365
Query: 389 SLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
SLLAAC + GD+ +AE L D P S+YVLL+N YA +W+ + RR M+ G
Sbjct: 366 SLLAACHSHGDVEMAELTASKLADAKPSHGSSYVLLSNTYARAKQWEDLRRTRRRMEEHG 425
Query: 449 IQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEN 508
+ KKPGLS IE+ G+H F D+ H+ESE IY MLE L +L Y E A LYE
Sbjct: 426 VTKKPGLSWIEVDGGVHSFATADKLHMESEDIYQMLEDLKHNLTSAAYEHEPFA--LYEQ 483
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 185/517 (35%), Positives = 281/517 (54%), Gaps = 66/517 (12%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W + I + + + + F + +H P++ T ++ GCA + G IH
Sbjct: 79 IHWNTIIKCYVENQFSHDGIVLFHEL-VHEYLPDNFTLPCVIKGCARLG--VVQEGKQIH 135
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
GL K+G ++V V +L++MY+K G +D A VFD M K WN++IDGY R G+I
Sbjct: 136 GLALKIGFG-SDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEI 194
Query: 166 ESAVRMFDEMPVRDAISWT-------------------------------ALLNGFVKRG 194
+ A+++F+EMP RDA SWT A++NG++K G
Sbjct: 195 DIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSG 254
Query: 195 YFEEALECFREMQIS-------------------------------GVEPDYVTIISVLN 223
F+ ALE F +M I G P + T++SVL+
Sbjct: 255 DFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLS 314
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
A + + LG G WIH Y+ K F+ + + +LI++Y++CGCIE A VF+ + K+ +
Sbjct: 315 AVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGH 374
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W +IIVG ++G AL F M K G KP+ + F G L AC+HAGL++DG +YFD+M
Sbjct: 375 WTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMM 434
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
Y++ P +EHYGC+VD+ RAG LE+A N +ENMP+ PN+V+ SLL R G I +
Sbjct: 435 NEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIG 494
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E + ++++ P Y+LL+NMYAA G W+ +R M RG +K PG SS+E
Sbjct: 495 EYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGT 554
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+HEF+ GD SH +++ IY+ + + LK G+VP+T
Sbjct: 555 LHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDT 591
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 13/278 (4%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+ A +FD + R I W ++ +V+ + + + F E+ + PD T+ V+
Sbjct: 62 DLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHEL-VHEYLPDNFTLPCVIK 120
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
CA +G + G IH LK F +V V +L+++YS+CG I+ AR+VF M + +V
Sbjct: 121 GCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVL 180
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WNS+I G+A G + AL+ F M + D S+T + S G +E + FD M
Sbjct: 181 WNSLIDGYARCGEIDIALQLFEEMPER----DAFSWTVLVDGLSKCGKVESARKLFDQMP 236
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
VS + +++ Y ++G + AL + MP+ + V ++A G + A
Sbjct: 237 CRNLVS-----WNAMINGYMKSGDFDSALELFYQMPIW-DLVTWNLMIAGYELNGQFMDA 290
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
++ + + L G ++ L ++ +AV GK R
Sbjct: 291 VKM--FFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGR 326
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 132/264 (50%), Gaps = 18/264 (6%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYS--RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
+H + LK ++ V + L+ LYS + + +AR +F R+ +R+L+ WN+II + N
Sbjct: 32 LHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVEN 91
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
F + + F+ + E + PD + + C+ G++++G + + KI +
Sbjct: 92 QFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKI-GFGSDVFV 149
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
G +V++YS+ G ++ A V + M + + V+ SL+ G+I +A +L + + + D
Sbjct: 150 QGSLVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERD 208
Query: 415 PGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFM-AGD-R 472
++ +L + + GK + A K+ M R + + + I+ +M +GD
Sbjct: 209 A---FSWTVLVDGLSKCGKVESARKLFDQMPCRNL--------VSWNAMINGYMKSGDFD 257
Query: 473 SHIESEHIYSMLELLSFDLKLCGY 496
S +E + + +L++++L + GY
Sbjct: 258 SALELFYQMPIWDLVTWNLMIAGY 281
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 178/465 (38%), Positives = 271/465 (58%), Gaps = 14/465 (3%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W +S + G +A F +M L G PN IT + +S C + L G IHG
Sbjct: 180 WNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNL--SLLRHGREIHGY 237
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAM--IDGYMRRGDI 165
K+ ++++VG +L+D YAK +++A F ++ +WNAM + G+ + GD
Sbjct: 238 CIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDG 297
Query: 166 ESAVR----------MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
++A+ +F E+ RD + W ++++ + G AL+ REM +S VE +
Sbjct: 298 KAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNT 357
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
VT++S L AC+ + L G IH+++++ + N+LID+Y RCG I+ +R++F
Sbjct: 358 VTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDL 417
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M +R LVSWN +I + ++GF +A+ F + G KP+ ++FT L+ACSH+GLIE+G
Sbjct: 418 MPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEG 477
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
+YF +MK Y + P +E Y C+VDL SRAG+ + L +E MP +PN V GSLL ACR
Sbjct: 478 WKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACR 537
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
+ LAE +YL +L+P NYVL+AN+Y+A G+W+ A KIR MK RG+ K PG
Sbjct: 538 IHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGC 597
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
S IE+ +H F+ GD SH E I + +E L FD+K GYVP+T
Sbjct: 598 SWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDT 642
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 200/470 (42%), Gaps = 119/470 (25%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WT+ + +C G E F M G P+H F + C++ + +G ++
Sbjct: 79 WTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKN--YRVGKDVYDY 136
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ +G + N+ + G+ +LDM+ K GRMD+A F+ + K F WN M+ GY +G+
Sbjct: 137 MLSIGFEGNSCVKGS-ILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE--- 192
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
F++AL FR+M + GV+P+ +TI S ++AC N
Sbjct: 193 ----------------------------FKKALNVFRKMVLEGVKPNSITIASAVSACTN 224
Query: 228 VGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFAR---------------- 270
+ L G IH Y +K ++ ++ V N+L+D Y++C +E AR
Sbjct: 225 LSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNA 284
Query: 271 -----------------QVFQRMH----------KRTLVSWNSIIVGFAVNGFVGEALEY 303
+ FQRMH R +V WNSII A +G AL+
Sbjct: 285 MLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDL 344
Query: 304 FNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLRYFDIM---------- 342
M + + V+ AL ACS H +I GL + +
Sbjct: 345 LREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGR 404
Query: 343 -------KKIYRVSPR--IEHYGCIVDLYSRAGRLEDALNVVEN---MPMKPNEVVLGSL 390
++I+ + P+ + + ++ +Y G DA+N+ + M +KPN + +L
Sbjct: 405 CGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNL 464
Query: 391 LAACRTKGDIILAE-----RLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
L+AC G ++ E ++MK +DP V+ Y + ++ + G+++
Sbjct: 465 LSACSHSG--LIEEGWKYFKMMKTEYAMDPAVE-QYACMVDLLSRAGQFN 511
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 116/222 (52%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F + +++ Y + G +E A RMFD+M R+ SWTA++ + G +EE ++ F M
Sbjct: 46 FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE 105
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
GV PD+ V AC+ + +G ++ Y+L F+ N V +++D++ +CG ++ A
Sbjct: 106 GVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIA 165
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
R+ F+ + + + WN ++ G+ G +AL F M EG KP+ ++ A++AC++
Sbjct: 166 RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNL 225
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
L+ G K+ + + +VD Y++ +E A
Sbjct: 226 SLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 267
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 143/343 (41%), Gaps = 81/343 (23%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
S+ + V W S IS +SGR A M L N +T ++ L C+ +
Sbjct: 315 SELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA-- 372
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L G IH + + GLD N ++ + L+DMY + G + + +FD M + +WN MI
Sbjct: 373 LRQGKEIHQFIIRCGLDTCNFILNS-LIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMIS 431
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
Y G AV +F + FR M G++P+++T
Sbjct: 432 VYGMHGFGMDAVNLFQQ----------------------------FRTM---GLKPNHIT 460
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDN--VKVCNTLIDLYSRCGCIEFARQVFQR 275
++L+AC++ G + G W + ++K ++ + V+ ++DL SR G +F
Sbjct: 461 FTNLLSACSHSGLIEEG-WKYFKMMKTEYAMDPAVEQYACMVDLLSRAG--QF------- 510
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC---SHAGLI 332
E LE+ ++K F+P+ + L AC + L
Sbjct: 511 ----------------------NETLEF---IEKMPFEPNAAVWGSLLGACRIHCNPDLA 545
Query: 333 EDGLRYFDIMKKIYRVSPRIE-HYGCIVDLYSRAGRLEDALNV 374
E RY ++ + P+ +Y + ++YS AGR EDA +
Sbjct: 546 EYAARY------LFELEPQSSGNYVLMANIYSAAGRWEDAAKI 582
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 21/262 (8%)
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC----NTLIDLYSRCGCIEFARQVFQR 275
S+L C + L +G +H Q + V VC + L+++Y + GC+E AR++F +
Sbjct: 15 SILQKCRKLYNLRLGFQVH----AQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDK 70
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M +R + SW +I+ + G E ++ F M EG +PD F ACS G
Sbjct: 71 MSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 130
Query: 336 LRYFDIMKKI-YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
+D M I + + ++ G I+D++ + GR++ A E + K +V + +++ +
Sbjct: 131 KDVYDYMLSIGFEGNSCVK--GSILDMFIKCGRMDIARRFFEEIEFK--DVFMWNIMVSG 186
Query: 395 RT-KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR--RTMKGRGIQK 451
T KG+ A + + +V GV N + +A +AV +R R + G I+
Sbjct: 187 YTSKGEFKKALNVFRKMV--LEGVKPNSITIA---SAVSACTNLSLLRHGREIHGYCIKV 241
Query: 452 KPGLSSIEIGSGIHEFMAGDRS 473
+ S + +G+ + ++ A RS
Sbjct: 242 EELDSDLLVGNSLVDYYAKCRS 263
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 178/449 (39%), Positives = 276/449 (61%), Gaps = 6/449 (1%)
Query: 53 SRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLG 112
S + R G EA F M G P+ I+ ++ +S C+ + + G HG V + G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN--ILWGKSCHGYVLRNG 367
Query: 113 LDR-NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
+ +N+ AL+DMY K R D A +FD M K+ TWN+++ GY+ G++++A
Sbjct: 368 FESWDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNACANVGT 230
F+ MP ++ +SW +++G V+ FEEA+E F MQ GV D VT++S+ +AC ++G
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
L + WI+ Y+ K + +V++ TL+D++SRCG E A +F + R + +W + I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
A+ G A+E F+ M ++G KPDGV+F GALTACSH GL++ G F M K++ VSP
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 351 RIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
HYGC+VDL RAG LE+A+ ++E+MPM+PN+V+ SLLAACR +G++ +A + +
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI 665
Query: 411 VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAG 470
L P +YVLL+N+YA+ G+W+ K+R +MK +G++K PG SSI+I HEF +G
Sbjct: 666 QVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSG 725
Query: 471 DRSHIESEHIYSMLELLSFDLKLCGYVPE 499
D SH E +I +ML+ +S G+VP+
Sbjct: 726 DESHPEMPNIEAMLDEVSQRASHLGHVPD 754
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 167/367 (45%), Gaps = 70/367 (19%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WTS I + R +A F RM PN +T + ++S CA L G +
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLED--LETGEKV 258
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ + G++ N++MV +A++D YM+
Sbjct: 259 YAFIRNSGIEVNDLMV--------------------------------SALVDMYMKCNA 286
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A R+FDE + A+ + +V++G EAL F M SGV PD ++++S +++
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+ + + G H YVL+ F+ +CN LID+Y +C + A ++F RM +T+V+W
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 285 NSIIVGFAVNGFVG-------------------------------EALEYFNSMQ-KEGF 312
NSI+ G+ NG V EA+E F SMQ +EG
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 313 KPDGVSFTGALTACSHAGLIE-DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
DGV+ +AC H G ++ Y+ I K ++ R+ +VD++SR G E A
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG--TTLVDMFSRCGDPESA 524
Query: 372 LNVVENM 378
+++ ++
Sbjct: 525 MSIFNSL 531
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 170/365 (46%), Gaps = 59/365 (16%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
+ S I + SG EA L F RM G +P+ TF LS CA S+ G IHGL
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA--KSRAKGNGIQIHGL 159
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ K+G YAK DL F N+++ Y G+++S
Sbjct: 160 IVKMG---------------YAK----DL-------------FVQNSLVHFYAECGELDS 187
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF-REMQISGVEPDYVTIISVLNACA 226
A ++FDEM R+ +SWT+++ G+ +R + ++A++ F R ++ V P+ VT++ V++ACA
Sbjct: 188 ARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACA 247
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ L G ++ ++ + N + + L+D+Y +C I+ A+++F L N+
Sbjct: 248 KLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNA 307
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDG 335
+ + G EAL FN M G +PD +S A+++CS H ++ +G
Sbjct: 308 MASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNG 367
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
+D + ++D+Y + R + A + + M K V S++A
Sbjct: 368 FESWDNI------------CNALIDMYMKCHRQDTAFRIFDRMSNK-TVVTWNSIVAGYV 414
Query: 396 TKGDI 400
G++
Sbjct: 415 ENGEV 419
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 46/262 (17%)
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE---FARQVFQRM 276
S L C + L + HR + KQ ++V L+ G E FA++VF+
Sbjct: 37 SSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 277 HKR-TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA------ 329
T +NS+I G+A +G EA+ F M G PD +F L+AC+ +
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 330 ----GLI-----------EDGLRYF-------DIMKKIY-RVSPR-IEHYGCIVDLYSRA 365
GLI ++ L +F D +K++ +S R + + ++ Y+R
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 366 GRLEDALNV----VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
+DA+++ V + + PN V + +++AC D+ E++ ++ + G++ N
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI--RNSGIEVND 271
Query: 422 VL---LANMYAAVGKWDGAGKI 440
++ L +MY D A ++
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRL 293
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 178/449 (39%), Positives = 276/449 (61%), Gaps = 6/449 (1%)
Query: 53 SRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLG 112
S + R G EA F M G P+ I+ ++ +S C+ + + G HG V + G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN--ILWGKSCHGYVLRNG 367
Query: 113 LDR-NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
+ +N+ AL+DMY K R D A +FD M K+ TWN+++ GY+ G++++A
Sbjct: 368 FESWDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNACANVGT 230
F+ MP ++ +SW +++G V+ FEEA+E F MQ GV D VT++S+ +AC ++G
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
L + WI+ Y+ K + +V++ TL+D++SRCG E A +F + R + +W + I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
A+ G A+E F+ M ++G KPDGV+F GALTACSH GL++ G F M K++ VSP
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 351 RIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
HYGC+VDL RAG LE+A+ ++E+MPM+PN+V+ SLLAACR +G++ +A + +
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI 665
Query: 411 VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAG 470
L P +YVLL+N+YA+ G+W+ K+R +MK +G++K PG SSI+I HEF +G
Sbjct: 666 QVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSG 725
Query: 471 DRSHIESEHIYSMLELLSFDLKLCGYVPE 499
D SH E +I +ML+ +S G+VP+
Sbjct: 726 DESHPEMPNIEAMLDEVSQRASHLGHVPD 754
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 167/367 (45%), Gaps = 70/367 (19%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WTS I + R +A F RM PN +T + ++S CA L G +
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLED--LETGEKV 258
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ + G++ N++MV +A++D YM+
Sbjct: 259 YAFIRNSGIEVNDLMV--------------------------------SALVDMYMKCNA 286
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A R+FDE + A+ + +V++G EAL F M SGV PD ++++S +++
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+ + + G H YVL+ F+ +CN LID+Y +C + A ++F RM +T+V+W
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 285 NSIIVGFAVNGFVG-------------------------------EALEYFNSMQ-KEGF 312
NSI+ G+ NG V EA+E F SMQ +EG
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 313 KPDGVSFTGALTACSHAGLIE-DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
DGV+ +AC H G ++ Y+ I K ++ R+ +VD++SR G E A
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG--TTLVDMFSRCGDPESA 524
Query: 372 LNVVENM 378
+++ ++
Sbjct: 525 MSIFNSL 531
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 170/365 (46%), Gaps = 59/365 (16%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
+ S I + SG EA L F RM G +P+ TF LS CA S+ G IHGL
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA--KSRAKGNGIQIHGL 159
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ K+G YAK DL F N+++ Y G+++S
Sbjct: 160 IVKMG---------------YAK----DL-------------FVQNSLVHFYAECGELDS 187
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF-REMQISGVEPDYVTIISVLNACA 226
A ++FDEM R+ +SWT+++ G+ +R + ++A++ F R ++ V P+ VT++ V++ACA
Sbjct: 188 ARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACA 247
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ L G ++ ++ + N + + L+D+Y +C I+ A+++F L N+
Sbjct: 248 KLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNA 307
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDG 335
+ + G EAL FN M G +PD +S A+++CS H ++ +G
Sbjct: 308 MASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNG 367
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
+D + ++D+Y + R + A + + M K V S++A
Sbjct: 368 FESWDNI------------CNALIDMYMKCHRQDTAFRIFDRMSNK-TVVTWNSIVAGYV 414
Query: 396 TKGDI 400
G++
Sbjct: 415 ENGEV 419
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 46/262 (17%)
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE---FARQVFQRM 276
S L C + L + HR + KQ ++V L+ G E FA++VF+
Sbjct: 37 SSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 277 HKR-TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA------ 329
T +NS+I G+A +G EA+ F M G PD +F L+AC+ +
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 330 ----GLI-----------EDGLRYF-------DIMKKIY-RVSPR-IEHYGCIVDLYSRA 365
GLI ++ L +F D +K++ +S R + + ++ Y+R
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 366 GRLEDALNV----VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
+DA+++ V + + PN V + +++AC D+ E++ ++ + G++ N
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI--RNSGIEVND 271
Query: 422 VL---LANMYAAVGKWDGAGKI 440
++ L +MY D A ++
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRL 293
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 156/377 (41%), Positives = 244/377 (64%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
+LD Y K G M A +F+ M ++ +W+ M+ GY + GD+E A +FD+MP ++ ++W
Sbjct: 226 ILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTW 285
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
T +++GF ++G +EA + +M+ +G++PD T+IS+L ACA G L +G +H + K
Sbjct: 286 TIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKK 345
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
K +V V N L+D+Y++CG ++ A +F M R LVSWN ++ G A++G +A++
Sbjct: 346 IRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQL 405
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F+ MQ+EGFKPD V+ L AC+HAG ++ GL YF+ M++ + + P IEHYGC++DL
Sbjct: 406 FSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLG 465
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
R GRLE+A +V++MPM+PN+V+ G+LL ACR + LAE+++ L+ L+ NY +
Sbjct: 466 RGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDPGNYSM 525
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSM 483
L+N++AA G W+ +R MK G+QK G SSIE+ +HEF D+SH E++ IY +
Sbjct: 526 LSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTVFDKSHPETDKIYQI 585
Query: 484 LELLSFDLKLCGYVPET 500
L L DLK Y PE
Sbjct: 586 LVKLGQDLKQVAYAPEA 602
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 167/355 (47%), Gaps = 46/355 (12%)
Query: 30 QISIQTNNSKSTVNPTVQWTSSISR-HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLS 88
Q+++ N +P V +++ R H ++ + +A F M +G ++ T+ LL
Sbjct: 70 QMNLAVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLK 129
Query: 89 GCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM--DLATVVFDAMRV 146
C L MIH V K G ++ V +L+D Y+K G + + A +F M
Sbjct: 130 ACNG--KGWLPTVQMIHCHVEKYGF-FGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGE 186
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
K +WN+MI G ++ GD+ A ++FDEM RDA+SW +L+G+VK G +A F +M
Sbjct: 187 KDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKM 246
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
+ NV +T++ Y + G +
Sbjct: 247 P---------------------------------------ERNVVSWSTMVSGYCKTGDM 267
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
E AR +F +M + LV+W II GFA G EA +N M+ G KPD + L AC
Sbjct: 268 EMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAAC 327
Query: 327 SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ +GL+ G + +KKI R+ + +VD+Y++ GR++ AL++ M M+
Sbjct: 328 AESGLLVLGKKVHASIKKI-RIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMR 381
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H ++K++ +++ V LI +S C + A VF ++ + +N++I N
Sbjct: 42 VHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQNSQ 101
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG 356
+A F MQK G D ++ L AC+ G + + + +E YG
Sbjct: 102 SLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGW----------LPTVQMIHCHVEKYG 151
Query: 357 ---------CIVDLYSRAGRLEDALNVVENMPMKPNE---VVLGSLLAACRTKGDIILAE 404
++D YS+ G L +N + M+ E V S++ GD+ A
Sbjct: 152 FFGDLFVPNSLIDSYSKCGLL--GVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRAR 209
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+L + + D V N +L + Y G+ A + M R +
Sbjct: 210 KLFDEMAERD-AVSWNTIL--DGYVKAGEMSQAFNLFEKMPERNV 251
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 279/454 (61%), Gaps = 3/454 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ I+ ++ EA F M G + + ++ LS CA+ + +G +IH
Sbjct: 207 VTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANL--LVVNMGKLIH 264
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L K+G + + + + AL+ MY+K G + +A +FD + +WN+MI GY++ +
Sbjct: 265 SLSLKIGTE-SYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLV 323
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
++A +FD MP +D +SW+++++G+ + F+E L F+EMQ+SG +PD T++SV++AC
Sbjct: 324 DNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISAC 383
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A + L G W+H Y+ + NV + TLID+Y +CGC+E A +VF M ++ + +WN
Sbjct: 384 ARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWN 443
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I+G A+NG V +L+ F++M+K P+ ++F G L AC H GL+++G +F M
Sbjct: 444 ALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHD 503
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+++ P ++HYGC+VDL RAG+L++A ++ MPM P+ G+LL AC+ GD + R
Sbjct: 504 HKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRR 563
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ + L++L P D +VLL+N+YA+ GKWD +IR M + K PG S IE IH
Sbjct: 564 VGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIH 623
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
EF+AGD++H + + I ML ++ LKL GY P+
Sbjct: 624 EFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPD 657
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 176/407 (43%), Gaps = 70/407 (17%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W I + ++ A + M + ++ T+ L+ C+ S+ + +H
Sbjct: 46 WNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSE--WEAKQVHNH 103
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG D ++V V L++ ++ M A VF+ V S +WN+++ GY+ G++E
Sbjct: 104 VLKLGFD-SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEE 162
Query: 168 A-------------------------------VRMFDEMPVRDAISWTALLNGFVKRGYF 196
A ++FDEM +D ++W+AL+ F + +
Sbjct: 163 AKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMY 222
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
EEA+ F M GV D V +S L+ACAN+ + +G IH LK + + + N L
Sbjct: 223 EEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNAL 282
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNS------------------------------ 286
I +YS+CG I AR++F + L+SWNS
Sbjct: 283 IYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWS 342
Query: 287 -IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+I G+A N E L F MQ GFKPD + ++AC+ +E G ++ K
Sbjct: 343 SMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQG-KWVHAYIKR 401
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLG 388
++ + ++D+Y + G +E AL V M K N ++LG
Sbjct: 402 NGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILG 448
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 102/233 (43%), Gaps = 12/233 (5%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ R+F+ + + W ++ +++ A ++ M + + D T ++ A
Sbjct: 28 IDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQA 87
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+ + +H +VLK F +V V NTLI+ +S C + A +VF VSW
Sbjct: 88 CSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSW 147
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
NSI+ G+ G V EA ++ M + ++ + GL+ + + FD M +
Sbjct: 148 NSILAGYIEIGNVEEAKHIYHQMPERSI----IASNSMIVLFGMRGLVVEACKLFDEMLE 203
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAAC 394
V+ + ++ + + E+A+ M + +EVV S L+AC
Sbjct: 204 KDMVT-----WSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSAC 251
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 171/447 (38%), Positives = 269/447 (60%), Gaps = 33/447 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I + + G E F M + +T + +LS CA L LG +H
Sbjct: 192 VSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGD--LRLGRKLH 249
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + +V VG AL+DM Y++ GD
Sbjct: 250 RYIIRNSNVNLDVFVGNALVDM-------------------------------YLKCGDA 278
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A ++F EMPV++ +SW ++++G ++G F+E+L FR+MQ GV+PD VT+++VLN+C
Sbjct: 279 NFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSC 338
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN+G L +G W+H Y+ + + + + N L+D+Y++CG I+ A VFQ M+++ + S+
Sbjct: 339 ANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYT 398
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++IVG A++G G+AL+ F+ M K G +PD V+F G LTACSH GL+E+G +YF+ M I
Sbjct: 399 AMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTI 458
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P++EHYGC+VDL RAG + +A + NMP++P+ VLG+LL AC+ G + L E
Sbjct: 459 YNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGES 518
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+MK + ++P D YVL++N+Y++ +W A K+R+TMK R ++K PG SSIE+ IH
Sbjct: 519 VMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIH 578
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLK 492
EF GD+SH + + IY +L+ + LK
Sbjct: 579 EFQKGDKSHPKIKEIYKLLDEIMSHLK 605
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 185/391 (47%), Gaps = 83/391 (21%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
E + + +M G P++ T +L CA+ S+ + G +HG K+GL ++V V
Sbjct: 108 EGLVVYKQMLSKGIVPDNYTIPFVLKACAE--SRAVREGEEVHGQAIKMGL-ASDVYVSN 164
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
L+ MYA V D +R SA ++FD P RD +S
Sbjct: 165 TLMRMYA----------VCDVIR---------------------SARKVFDTSPQRDLVS 193
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
WT ++ G+VK G+ E + F EM ++ D +T++ VL++CA +G L +G +HRY++
Sbjct: 194 WTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYII 253
Query: 243 KQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
+ + +V V N L+D+Y +CG FAR+VFQ M + +VSWNS+I G A G E+L
Sbjct: 254 RNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESL 313
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL---RYFDIMKKIYRVSPRIEHY--G 356
F MQ+ G KPD V+ L +C++ G++E G Y D R R + +
Sbjct: 314 YMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLD------RNQIRADGFIGN 367
Query: 357 CIVDLYSRAGRLED-------------------------------ALNVVENMP---MKP 382
+VD+Y++ G ++ AL++ MP ++P
Sbjct: 368 ALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEP 427
Query: 383 NEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
+EV +L AC G L E KY D+
Sbjct: 428 DEVTFVGVLTACSHVG---LVEEGRKYFEDM 455
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 145/342 (42%), Gaps = 79/342 (23%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W S IS + G+ E+ F +M G P+ +T + +L+ CA+ L LG
Sbjct: 290 VKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANL--GVLELG 347
Query: 102 AMIHGLVCKLGLDRNNV----MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
+H LDRN + +G AL+DMYAK G +D A VF AM K +++ AMI
Sbjct: 348 KWVHAY-----LDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIV 402
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
G G A+ +F EMP G+EPD VT
Sbjct: 403 GLAMHGQGGKALDLFSEMPKM-------------------------------GIEPDEVT 431
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+ VL AC++VG + G ++ F+D + N L GC+
Sbjct: 432 FVGVLTACSHVGLVEEG--------RKYFEDMSTIYNLRPQL-EHYGCM----------- 471
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
++G A G + EA E+ +M E PD L AC G +E G
Sbjct: 472 --------VDLLGRA--GLINEAEEFIRNMPIE---PDAFVLGALLGACKIHGKVELG-- 516
Query: 338 YFDIMKKIYRVSPRIE-HYGCIVDLYSRAGRLEDALNVVENM 378
+MKKI ++ PR + Y + ++YS A R DAL + + M
Sbjct: 517 -ESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTM 557
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 272/433 (62%), Gaps = 29/433 (6%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ M H +PN TF +L CA L LG +H + K G + + V L+ M
Sbjct: 215 YNTMRRHAVSPNKFTFPFVLKACAGMMR--LELGGAVHASMVKFGFEEDP-HVRNTLVHM 271
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y + DG G + SA ++FDE PV+D+++W+A++
Sbjct: 272 YCCCCQ-----------------------DG--SSGPV-SAKKVFDESPVKDSVTWSAMI 305
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
G+ + G A+ FREMQ++GV PD +T++SVL+ACA++G L +G W+ Y+ +++
Sbjct: 306 GGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIM 365
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
+V++CN LID++++CG ++ A +VF+ M RT+VSW S+IVG A++G EA+ F+ M
Sbjct: 366 RSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEM 425
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
++G PD V+F G L+ACSH+GL++ G YF+ M+ ++ + P+IEHYGC+VD+ SRAGR
Sbjct: 426 MEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGR 485
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
+ +AL V MP++PN+V+ S++ AC +G++ L E + K L+ +P +SNYVLL+N+
Sbjct: 486 VNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNI 545
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
YA + +W+ K+R M +G++K PG + IE+ + I+EF+AGD+SH + + IY M+E +
Sbjct: 546 YAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEM 605
Query: 488 SFDLKLCGYVPET 500
++K GYVP T
Sbjct: 606 GREIKRAGYVPTT 618
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 167/374 (44%), Gaps = 80/374 (21%)
Query: 23 QNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHIT 82
Q+ ++ P +S + +S V +V W++ I + R+G A A F M + G P+ IT
Sbjct: 277 QDGSSGP-VSAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEIT 335
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVM----VGTALLDMYAKFGRMDLAT 138
+++LS CAD LGA+ G + ++R N+M + AL+DM+AK G +D A
Sbjct: 336 MVSVLSACAD-------LGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAV 388
Query: 139 VVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE 198
VF M+V++ +W +MI G G AV +FDEM
Sbjct: 389 KVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEM----------------------- 425
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
M+ GV+PD V I VL+AC++ G + G H Y NT+ +
Sbjct: 426 -------ME-QGVDPDDVAFIGVLSACSHSGLVDKG---HYYF------------NTMEN 462
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
++S IE + ++ + G V EALE+ +M E P+ V
Sbjct: 463 MFSIVPKIE---------------HYGCMVDMLSRAGRVNEALEFVRAMPVE---PNQVI 504
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE-HYGCIVDLYSRAGRLEDALNVVEN 377
+ +TAC G ++ G + K++ R P E +Y + ++Y++ R E V E
Sbjct: 505 WRSIVTACHARGELKLGE---SVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREM 561
Query: 378 MPMKPNEVVLGSLL 391
M +K + GS +
Sbjct: 562 MDVKGMRKIPGSTM 575
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 15/216 (6%)
Query: 176 PVRDAISWTALLNGFVKRGYFE-EALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
P DA + L+ F + + + AL + M+ V P+ T VL ACA + L +G
Sbjct: 187 PSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELG 246
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE-------FARQVFQRMHKRTLVSWNSI 287
+H ++K F+++ V NTL+ +Y C C + A++VF + V+W+++
Sbjct: 247 GAVHASMVKFGFEEDPHVRNTLVHMY--CCCCQDGSSGPVSAKKVFDESPVKDSVTWSAM 304
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG--LRYFDIMKKI 345
I G+A G A+ F MQ G PD ++ L+AC+ G +E G L + K I
Sbjct: 305 IGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNI 364
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
R +E ++D++++ G ++ A+ V M ++
Sbjct: 365 MR---SVELCNALIDMFAKCGDVDRAVKVFREMKVR 397
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/489 (35%), Positives = 280/489 (57%), Gaps = 33/489 (6%)
Query: 43 NPTVQWTSSISRHC-RSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP V + I + C ++ +A + +M + PN T+ TL C + G
Sbjct: 92 NPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAA--EEG 149
Query: 102 AMIHGLVCKLGLD------------------------------RNNVMVGTALLDMYAKF 131
+H V K GL ++V+ A++D Y K
Sbjct: 150 VQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKC 209
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
G ++ A +F +M K+ +WN M+ G + G IE A +F+EM ++ ISW+A+++G++
Sbjct: 210 GEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYI 269
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
K GY++EALE F MQ + P + SVL ACAN+G L G WIH YV +
Sbjct: 270 KGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAV 329
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
+ L+D+Y++CG ++ A VF++M K+ + +WN++I G ++G +A+E F MQK+
Sbjct: 330 LGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQK 389
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
F+P+G++ G L+AC+H+G++++GLR F+ M+++Y + P +EHYGC+VDL RAG L +A
Sbjct: 390 FRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEA 449
Query: 372 LNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAV 431
V+ +MPM+P+ V G+LL ACR GD+ L ER+ K L++L+P Y LL+N+YA
Sbjct: 450 EEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARA 509
Query: 432 GKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
G+WD +R+ MK RG++ G+S I+ +HEF GD SH + ++IY ML+ + L
Sbjct: 510 GRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRL 569
Query: 492 KLCGYVPET 500
K+ G+ P T
Sbjct: 570 KMEGFSPNT 578
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 140/290 (48%), Gaps = 13/290 (4%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
++ A+++F+ +P + + ++ G ++ +A+ C+ +M I+ P+ T ++
Sbjct: 79 NLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFK 138
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
AC G+ +H +V+KQ +V + + I +Y G +E AR++ ++
Sbjct: 139 ACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVIC 198
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
+N++I G+ G V A E F SM+ + V +G + C G+IE+ F+ MK
Sbjct: 199 FNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSG-MAKC---GMIEEARELFNEMK 254
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDAL---NVVENMPMKPNEVVLGSLLAACRTKGDI 400
+ +S + ++D Y + G ++AL NV++ ++P + VL S+LAAC G +
Sbjct: 255 EKNEIS-----WSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGAL 309
Query: 401 ILAERLMKYLVDLDPGVDSNY-VLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+ Y+ + D+ L +MYA G+ D A + M+ + +
Sbjct: 310 DQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEV 359
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/456 (39%), Positives = 267/456 (58%), Gaps = 34/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ IS + G+ EA F R+ P+ T + +LS C L G I
Sbjct: 178 VVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGD--LNSGEWI 235
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + ++G+ RN V VGT+L+DM Y + G+
Sbjct: 236 HKCIMEMGMVRN-VFVGTSLVDM-------------------------------YAKCGN 263
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A +FD MP +D +SW A++ G+ G +EA++ F +MQ V+PD T++ VL+A
Sbjct: 264 MEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSA 323
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA +G L +G W+ V + +F N + LIDLY++CG + A +VF+ M ++ V W
Sbjct: 324 CARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVW 383
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+II G A+NG+V + F ++K G KPDG +F G L C+HAGL+++G RYF+ M +
Sbjct: 384 NAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYR 443
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ ++P IEHYGC+VDL RAG L++A ++ NMPM+ N +V G+LL ACR D LAE
Sbjct: 444 FFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAE 503
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+K L++L+P NYVLL+N+Y+A KWD A K+R +M + IQK PG S IE+ +
Sbjct: 504 LALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIV 563
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF+ GD+ H SE IY+ L+ L+ +K+ GYVP T
Sbjct: 564 HEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTT 599
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 194/380 (51%), Gaps = 39/380 (10%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFT-RMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
P + +++ R S + A+EF M G PN+ TF +L CA L LG
Sbjct: 74 QPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD--LQLG 131
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IH LV K G D +V V T+L+ +YAK G +
Sbjct: 132 VKIHTLVVKGGFD-CDVFVKTSLVCLYAKCGYL--------------------------- 163
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
E A ++FD++P ++ +SWTA+++G++ G F EA++ FR + + PD TI+ V
Sbjct: 164 ----EDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRV 219
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+AC +G L G WIH+ +++ NV V +L+D+Y++CG +E AR VF M ++ +
Sbjct: 220 LSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDI 279
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSW ++I G+A+NG EA++ F MQ+E KPD + G L+AC+ G +E G +
Sbjct: 280 VSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGL 339
Query: 342 M-KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+ + + +P + ++DLY++ G + A V + M K + VV ++++ G +
Sbjct: 340 VDRNEFLYNPVLGT--ALIDLYAKCGSMSRAWEVFKGMKEK-DRVVWNAIISGLAMNGYV 396
Query: 401 ILAERLMKYLVDLDPGVDSN 420
++ L + L D N
Sbjct: 397 KISFGLFGQVEKLGIKPDGN 416
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/452 (37%), Positives = 280/452 (61%), Gaps = 5/452 (1%)
Query: 43 NP-TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP V WT IS + + + +A F+ + G P+ + +S C + L G
Sbjct: 316 NPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGH--RKDLSNG 373
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
++HG+V + L + + VG AL+DMY++ G +++A VF M +K +W ++++G+++
Sbjct: 374 RIVHGMVFRFELGSDPI-VGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIK 432
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE-PDYVTIIS 220
DIE+A R+FDEMP+R+++SWTA++ G+V+ LE F+EM+ G + P +TI++
Sbjct: 433 CNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVA 492
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VL+ CA++G +G +H YV K + +V V N L+D+Y++ G + A ++FQ M KR
Sbjct: 493 VLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRD 552
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+ SW ++I G A++G ALE F+ M K G P+ V+ L+ACSHAGL+ +G F
Sbjct: 553 VFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGRSLFQ 612
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + + + P+I+HYGC+VDL RAG L +A ++E+MP+KP+ V+ SLL+AC G++
Sbjct: 613 KMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHGNL 672
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
LAE K +++L+P D Y+LL N+Y + +W+ A K R+ M+ R ++KKPG S +E+
Sbjct: 673 ALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSWVEV 732
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+HEF+A D H +Y++LE ++ +K
Sbjct: 733 NGVVHEFLAEDAVHCIRADVYTVLEAITEQMK 764
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 134/323 (41%), Gaps = 67/323 (20%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+++ Y + G A ++F+ + D +SWT L++ ++ +A F + SG+ PD
Sbjct: 294 LLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPD 353
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
++ ++AC + L G +H V + + + V N LID+YSR G IE A VF+
Sbjct: 354 SFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFK 413
Query: 275 RMHKRTLVSWNSIIVGF--------------------------AVNGFV-GE----ALEY 303
M + + SW S++ GF + G+V GE LE
Sbjct: 414 TMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLEL 473
Query: 304 FNSMQKEGFK-PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M+ EG P ++ L+ C+ G + G + K + + ++D+Y
Sbjct: 474 FQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKT-NLDLDVTVNNALMDMY 532
Query: 363 SRAGRLEDALNVVENMPMK----------------------------------PNEVVLG 388
+++G L AL + + MP + PNEV L
Sbjct: 533 AKSGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLL 592
Query: 389 SLLAACRTKGDIILAERLMKYLV 411
S+L+AC G ++ L + +V
Sbjct: 593 SVLSACSHAGLVVEGRSLFQKMV 615
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 168/428 (39%), Positives = 256/428 (59%), Gaps = 32/428 (7%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH ++ + GLD + ++ L YA GR+D + +F + S F W A+I G+ RG
Sbjct: 49 IHAVLFRHGLDHHPIL-NFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 164 DIESAVRMFDEMPV-------------------------------RDAISWTALLNGFVK 192
D+ SA ++FD MP RD + W +++G+ +
Sbjct: 108 DVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQ 167
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
G EAL FR M + +P+ VT++SVL+AC +G L G W+H Y+ + NV V
Sbjct: 168 NGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHV 227
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
L+D+YS+CG +E AR VF ++ + +V+WNS+IVG+A++GF EAL+ F SM + G
Sbjct: 228 GTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGL 287
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
P ++F G L+AC H+G + +G F+ MK Y + P+IEHYGC+V+L RAG +E A
Sbjct: 288 HPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAY 347
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
+V+NM ++P+ V+ G+LL ACR G I L E++++ LVD + Y+LL+N+YAAVG
Sbjct: 348 ELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVG 407
Query: 433 KWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
WDG ++R MK G++K+PG SSIE+ + +HEF+AG +H + + IY MLE ++ LK
Sbjct: 408 NWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLK 467
Query: 493 LCGYVPET 500
GY P+T
Sbjct: 468 SHGYTPQT 475
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 37/233 (15%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W I + ++G EA + F RM PN +T +++LS C + L G +H
Sbjct: 156 VCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGA--LESGRWVH 213
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ G+ + NV VGTAL+DMY+K G ++ A +VFD + K WN+MI GY
Sbjct: 214 SYIENNGI-QFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGY------ 266
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
G+ +EAL+ F+ M G+ P +T I +L+AC
Sbjct: 267 -------------------------AMHGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 301
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRM 276
+ G + G W +K ++ K+ + +++L R G +E A ++ + M
Sbjct: 302 GHSGWVTEG-WDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNM 353
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/454 (38%), Positives = 268/454 (59%), Gaps = 34/454 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I + + EA F RM + PN IT + +L+ CA S+ L +H
Sbjct: 204 VSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACAR--SRDLETAKQVH 261
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + G+ + V+ +AL+D+Y K G LA
Sbjct: 262 KYIDETGIGFHTVLT-SALMDVYCKCGCYPLAR--------------------------- 293
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+F++MP ++ W ++NG V+ +EEAL F EMQ+SGV+ D VT+ S+L AC
Sbjct: 294 ----DLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIAC 349
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++G L +G W+H Y+ K+ + +V + L+D+Y++CG IE A +VFQ M ++ +++W
Sbjct: 350 THLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWT 409
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++IVG A+ G +ALE F+ MQ KPD ++F G L ACSHAGL+ +G+ YF+ M
Sbjct: 410 ALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNK 469
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P IEHYGC+VD+ RAGR+ +A ++++NMPM P+ VL LL+ACR G++++AER
Sbjct: 470 YGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAER 529
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ L++LDP YVLL+N+Y+++ W+ A K+R M R I+K PG S+IE+G +H
Sbjct: 530 AAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVH 589
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
EF+ GD SH +S IY L+ + LK GYVP+
Sbjct: 590 EFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPD 623
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 159/340 (46%), Gaps = 39/340 (11%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTR-MTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NPT +SI R + + A+ F + M L G +P+ TF +L C L G
Sbjct: 102 NPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG-----VLCEG 156
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H KLG ++ N +++ Y
Sbjct: 157 KQLHCHSTKLGF--------------------------------ASDAYIQNTLMNMYSN 184
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G + SA ++FD+M + +SW ++ + + EA++ FR M+I+ V+P+ +T+++V
Sbjct: 185 CGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNV 244
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L ACA L +H+Y+ + + + + L+D+Y +CGC AR +F +M ++ L
Sbjct: 245 LTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNL 304
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
WN +I G + EAL FN MQ G K D V+ L AC+H G +E G ++ +
Sbjct: 305 FCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELG-KWLHV 363
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ ++ + +VD+Y++ G +E A+ V + MP K
Sbjct: 364 YIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEK 403
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 172/375 (45%), Gaps = 46/375 (12%)
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
C L L++ M + L ++A+ R L F A ++ + A+ D G + A
Sbjct: 43 CLLSLEKCTTM--SQLKQIHAQMLRTCLFVDPFSASKI---VAFCALHDS----GSLPYA 93
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
+F+++P + +++ G+ + +A+ ++ M + G++PD T S+ +C
Sbjct: 94 RLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC--- 150
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
G L G +H + K F + + NTL+++YS CGC+ AR+VF +M +++VSW ++I
Sbjct: 151 GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMI 210
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLR 337
+A EA++ F M+ KP+ ++ LTAC+ H + E G+
Sbjct: 211 GAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIG 270
Query: 338 YFDIM-KKIYRVSPRIEHYGCIVDLYSRA-------------GRLED-----ALNVVENM 378
+ ++ + V + Y DL+++ G +ED AL++ M
Sbjct: 271 FHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEM 330
Query: 379 PM---KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-VLLANMYAAVGKW 434
+ K ++V + SLL AC G + L + L Y+ VD L +MYA G
Sbjct: 331 QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSI 390
Query: 435 DGAGKIRRTMKGRGI 449
+ A ++ + M + +
Sbjct: 391 ESAMRVFQEMPEKDV 405
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 182/465 (39%), Positives = 273/465 (58%), Gaps = 8/465 (1%)
Query: 40 STVNPT-VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
S V P + W I+ SG +EA L F M L G P+ T ++L D L
Sbjct: 209 SGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLED--L 266
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
+G +IHG V K GL + V +AL+DMY K + VFD M + NA I G
Sbjct: 267 VMGILIHGYVIKQGLVSDKC-VSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFG 325
Query: 159 YMRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
R G +ES++R+F ++ + + +SWT+++ + G EALE FREMQI+GV+P+
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPN 385
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
VTI +L AC N+ L G H + L++ +V V + LID+Y++CG I+ +R F
Sbjct: 386 SVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFD 445
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
+ + LV WN++I G+A++G EA+E F+ MQ+ G KPD +SFT L+ACS +GL E+
Sbjct: 446 GIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEE 505
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
G YF+ M Y + R+EHY C+V L SRAG+LE A ++ MP+ P+ V G+LL++C
Sbjct: 506 GSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPG 454
R ++ L E + L +L+P NY+LL+N+YA+ G W+ ++R MK +G++K PG
Sbjct: 566 RVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPG 625
Query: 455 LSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
S IE+ + +H +AGD+SH + I L+ LS ++K GY PE
Sbjct: 626 CSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPE 670
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 149/296 (50%), Gaps = 8/296 (2%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F++M G P++ + + CA + L +HG+ G D ++ V ++L+ M
Sbjct: 102 FSQMLTRGLMPDNRVLPSAVKACAGLSA--LKPARQVHGIASVSGFDSDS-FVQSSLVHM 158
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR----DAISW 183
Y K ++ A VFD M +W+A++ Y R+G ++ A R+F EM + ISW
Sbjct: 159 YIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISW 218
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
++ GF G + EA+ F +M + G EPD TI SVL A ++ L +G+ IH YV+K
Sbjct: 219 NGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIK 278
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
Q + V + LID+Y +C C QVF +M + S N+ I G + NG V +L
Sbjct: 279 QGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRL 338
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
F ++ +G + + VS+T + CS G + L F M +I V P C++
Sbjct: 339 FRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREM-QIAGVKPNSVTIPCLL 393
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A + D +P + S++ L+ F K F AL F +M G+ PD + S + ACA
Sbjct: 67 ATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAG 126
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ L +H F + V ++L+ +Y +C I A +VF RM + +VSW+++
Sbjct: 127 LSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSAL 186
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+ +A G V EA F+ M G +P+ +S+ G + +H+GL + + F
Sbjct: 187 VAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMF 238
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 20/220 (9%)
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
TI++ LN+ +L H ++LK ++ + L+ Y+ C A V +
Sbjct: 17 TILNCLNS--TTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLV 74
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+ + S++++I F+ AL F+ M G PD A+ AC+ GL
Sbjct: 75 PEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACA-------GL 127
Query: 337 RYFDIMKKIYRVSPRIEHY-------GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
++++ ++ + + +V +Y + ++ DA V + M +P+ V +
Sbjct: 128 SALKPARQVHGIA-SVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSA 185
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYA 429
L+AA +G + A+RL + D GV N + M A
Sbjct: 186 LVAAYARQGCVDEAKRLFSEMG--DSGVQPNLISWNGMIA 223
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/457 (38%), Positives = 277/457 (60%), Gaps = 42/457 (9%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTL---HGTNP---NHITFITLLSGCAD 92
K +P +++ R + ++ A+ + L HG NP + TF ++ CA
Sbjct: 115 KGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAG 174
Query: 93 FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTW 152
C LG +HG V K G ++N +V +L++MY K +D DA RV
Sbjct: 175 L--MCYDLGKQVHGHVFKFG-QKSNTVVENSLVEMYVKCDSLD------DAHRV------ 219
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDA--ISWTALLNGFVKRGYFEEALECFREMQISG 210
F+EM RDA SWTA+++G+ + G + +ALE FR MQ+ G
Sbjct: 220 -------------------FEEMTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVG 260
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
+EPD ++++SVL CA +G L +G WIH Y K F N+ VCN LI++Y++CG I+ R
Sbjct: 261 IEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGR 320
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
++F +M +R ++SW+++IVG A +G EA+E F MQK +P ++F G LTAC+HAG
Sbjct: 321 RLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAG 380
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
L+ +GLRYF+ MK+ Y + P +EHYGC+V+L +GRL+ AL +V+ MP KP+ + GSL
Sbjct: 381 LLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSL 440
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
L++CR+ G++ +A M++L++L+P NYVLL+N+YA +GKWDG ++R+ M+ + ++
Sbjct: 441 LSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMK 500
Query: 451 KKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
K PG SSIE+ + + EF +GD S S+ I +L+LL
Sbjct: 501 KTPGCSSIEVDNMVQEFASGDDSKPFSKAICRVLKLL 537
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 174/407 (42%), Gaps = 85/407 (20%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
F+ +L C + IH + K L +++ +V T ++D+ +G + A ++F
Sbjct: 62 FVPILKDCPNIVEL-----KKIHAHIVKFSLSQSSFLV-TKMVDVCNHYGETEYANLLFK 115
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
+ ++F +NAMI Y A+ ++ +M L N + F
Sbjct: 116 GVADPNAFLYNAMIRAYKHNKVYVLAITVYKQM----------LGNPHGENPIF------ 159
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
PD T V+ +CA + +G +H +V K K N V N+L+++Y +
Sbjct: 160 ----------PDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVK 209
Query: 263 CGCIEFARQVFQRMHKR--TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT 320
C ++ A +VF+ M +R T+ SW +I+ G+A G +ALE+F MQ G +PD +S
Sbjct: 210 CDSLDDAHRVFEEMTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLV 269
Query: 321 GALTACSHAGLIE-----------------------------------DGLRYFDIMKKI 345
L C+ G +E G R FD MK+
Sbjct: 270 SVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKER 329
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIIL 402
+S + ++ + GR +A+ + + M ++P+ + LL AC G +L
Sbjct: 330 DVIS-----WSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAG--LL 382
Query: 403 AERL-----MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
E L MK +++PGV+ +Y L N+ G+ D A ++ + M
Sbjct: 383 NEGLRYFESMKRDYNIEPGVE-HYGCLVNLLGLSGRLDQALELVKKM 428
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/456 (38%), Positives = 277/456 (60%), Gaps = 6/456 (1%)
Query: 43 NPTV-QWTSSISRHCRSGRIAEAALEFTRM--TLHGTNPNHITFITLLSGCADFPSQCLF 99
NP + W + I +S A F M T T P +T+ ++ A
Sbjct: 57 NPNLFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLG--LAH 114
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
GA +HG V KLGL+ N+ + +L+MY G + A +FD TWN MI G
Sbjct: 115 EGAQLHGRVIKLGLE-NDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGL 173
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ G+I+ + R+FD+M +R+ +SW ++++G+V++G F EA+E F MQ G++P T++
Sbjct: 174 AKCGEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMV 233
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
S+LNACA +G L G WIH Y++K +F N V +ID+YS+CG I+ A QVF+ K+
Sbjct: 234 SLLNACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKK 293
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
L WNS+I+G A++G EA+ F+ ++ KPD VSF G LTAC+HAG+++ YF
Sbjct: 294 GLSCWNSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYF 353
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
+M + Y++ P I+HY C+VD+ RAG LE+A ++++MP+ P+ ++ GSLL++CR G+
Sbjct: 354 LLMSETYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGN 413
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
I +A++ K + +LDP S+++LL+N+YAA ++ A + R ++K + + K+PG S IE
Sbjct: 414 IEMAKQAAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIE 473
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCG 495
+ +HEF+AG R H S+ IY L+ L LK G
Sbjct: 474 VNGEVHEFVAGGRLHPRSKDIYHALDDLGLTLKEMG 509
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 143/298 (47%), Gaps = 21/298 (7%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH + K GL ++ + L + G ++ A +VF +R + F WN +I G+ +
Sbjct: 15 IHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVWNTIIRGFSQSS 74
Query: 164 DIESAVRMFDEM--------PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
+A+ +F +M P R +++ ++ + + G E + + G+E D
Sbjct: 75 TPHNAISLFIDMMFTSPTTQPQR--LTYPSVFKAYAQLGLAHEGAQLHGRVIKLGLENDQ 132
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
++LN N G LG I D V NT+I ++CG I+ +R++F +
Sbjct: 133 FIQNTILNMYVNCGFLGEAQRIFDGATGFD----VVTWNTMIIGLAKCGEIDKSRRLFDK 188
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M R VSWNS+I G+ G EA+E F+ MQ+EG KP + L AC+ G + G
Sbjct: 189 MLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLGALRQG 248
Query: 336 LRYFD-IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLG 388
D I+K + ++ + I+D+YS+ G ++ AL V ++ P K N ++LG
Sbjct: 249 EWIHDYIVKNNFALNSIV--ITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILG 304
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 37/240 (15%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K + TV W S IS + R GR EA F+RM G P+ T ++LL+ CA + L
Sbjct: 188 KMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLGA--L 245
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G IH + K N++++ TA++DMY+K G +D A VF + K WN++I G
Sbjct: 246 RQGEWIHDYIVKNNFALNSIVI-TAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILG 304
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
G AVR+F +++ S ++PD+V+
Sbjct: 305 LAMSGRGNEAVRLFS-------------------------------KLESSNLKPDHVSF 333
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFK--DNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
I VL AC + G + + ++ + +K ++K + ++D+ R G +E A ++ + M
Sbjct: 334 IGVLTACNHAGMVDRAK-DYFLLMSETYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSM 392
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 183/496 (36%), Positives = 279/496 (56%), Gaps = 7/496 (1%)
Query: 9 ILPQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEF 68
IL P Q L T + NPT+ +S+ R + F
Sbjct: 37 ILNNPHFHGQFVATIALHNTTNLDYANKLLNHNNNPTLFTLNSMIRAYSKSSTPSKSFHF 96
Query: 69 TRMTLHGTN----PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTAL 124
LH N P++ TF L+ CA Q G +HG V K G + + V T L
Sbjct: 97 YANILHSNNNNLSPDNYTFTFLVRTCAQL--QAHVTGLCVHGAVIKHGFELDP-HVQTGL 153
Query: 125 LDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWT 184
+ MYA+ G + VFD T AM++ + GDI+ A +MFDEMP RD ++W
Sbjct: 154 VFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWN 213
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
A++ G+ + G EAL+ F MQ+ GV+ + V+++ VL+AC ++ L G W+H YV +
Sbjct: 214 AMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERY 273
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
+ V + L+D+Y++CG ++ A QVF M +R + +W+S I G A+NGF E+L+ F
Sbjct: 274 KVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLF 333
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
N M++EG +P+G++F L CS GL+E+G ++FD M+ +Y + P++EHYG +VD+Y R
Sbjct: 334 NDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGR 393
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLL 424
AGRL++ALN + +MPM+P+ +LL ACR + L E + +V+L+ D YVLL
Sbjct: 394 AGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKELGEIAQRKIVELEDKNDGAYVLL 453
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
+N+YA W+ +R+TMK +G++K PG S IE+ +HEF+ GD+SH + I L
Sbjct: 454 SNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIEMKL 513
Query: 485 ELLSFDLKLCGYVPET 500
E +S L+L GYV T
Sbjct: 514 EEISKCLRLSGYVANT 529
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 174/420 (41%), Positives = 252/420 (60%), Gaps = 8/420 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAM 103
V W IS + R R EA + RM + PN T ++ LS CA + L LG
Sbjct: 174 AVSWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRN--LELGKE 231
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH + LD +M G ALLDMY K G + +A +FDAM VK+ W +M+ GY+ G
Sbjct: 232 IHDYIAN-ELDLTPIM-GNALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICG 289
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
++ A +F+ P RD + WTA++NG+V+ +FE+A+ F EMQI GVEPD ++++L
Sbjct: 290 QLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLT 349
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
CA +G L G WIH Y+ + K + V LI++Y++CGCIE + ++F + S
Sbjct: 350 GCAQLGALEQGKWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTTS 409
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W SII G A+NG EALE F +MQ G KPD ++F L+AC HAGL+E+G + F M
Sbjct: 410 WTSIICGLAMNGKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSMS 469
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL---GSLLAACRTKGDI 400
IY + P +EHYGC +DL RAG L++A +V+ +P + NE+++ G+LL+ACRT G+I
Sbjct: 470 SIYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPDQNNEIIVPLYGALLSACRTYGNI 529
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+ ERL L + S + LLA++YA+ +W+ K+R MK GI+K PG S+IE+
Sbjct: 530 DMGERLATALAKVKSSDSSLHTLLASIYASADRWEDVRKVRSKMKDLGIKKVPGYSAIEV 589
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 190/435 (43%), Gaps = 103/435 (23%)
Query: 52 ISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKL 111
I + G + A F ++ G P++ T+ +L G + G IH V K
Sbjct: 80 IKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGE--VREGEKIHAFVVKT 137
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
GL+ + V +L+DMYA+ G +++G+ ++
Sbjct: 138 GLEFDPY-VCNSLMDMYAELG----------------------LVEGF---------TQV 165
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLNACANVGT 230
F+EMP RDA+SW +++G+V+ FEEA++ +R MQ+ S +P+ T++S L+ACA +
Sbjct: 166 FEEMPERDAVSWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRN 225
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
L +G IH Y+ + + N L+D+Y +CGC+ AR++F M + + W S++ G
Sbjct: 226 LELGKEIHDYI-ANELDLTPIMGNALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTG 284
Query: 291 FA--------------------------VNGFVG-----EALEYFNSMQKEGFKPDGVSF 319
+ +NG+V +A+ F MQ G +PD
Sbjct: 285 YVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIV 344
Query: 320 TGALTACSHAGLIEDGL---RYFD---IMKKIYRVSPRIEHY---GCI---VDLY----- 362
LT C+ G +E G Y D I + IE Y GCI ++++
Sbjct: 345 VTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKD 404
Query: 363 -------------SRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERL 406
+ G+ +AL + E M +KP+++ ++L+AC G + +L
Sbjct: 405 MDTTSWTSIICGLAMNGKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKL 464
Query: 407 ---MKYLVDLDPGVD 418
M + ++P ++
Sbjct: 465 FHSMSSIYHIEPNLE 479
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 164/352 (46%), Gaps = 24/352 (6%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD A R+F+ + + ++ FVKRG A+ F++++ GV PD T VL
Sbjct: 56 GDFNYANRIFNHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVL 115
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+G + G IH +V+K + + VCN+L+D+Y+ G +E QVF+ M +R V
Sbjct: 116 KGIGCIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAV 175
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
SWN +I G+ EA++ + MQ E KP+ + L+AC+ +E G D
Sbjct: 176 SWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDY 235
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
+ ++P + + ++D+Y + G + A + + M +K N S++ G +
Sbjct: 236 IANELDLTPIMGN--ALLDMYCKCGCVSVAREIFDAMIVK-NVNCWTSMVTGYVICGQLD 292
Query: 402 LAERLMKYLVDLDPGVDSN-YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK-------- 452
A +YL + P D + + N Y ++ A + M+ RG++
Sbjct: 293 QA----RYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLL 348
Query: 453 ---PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
L ++E G IH ++ +R +++ +++E+ + CG + +++
Sbjct: 349 TGCAQLGALEQGKWIHNYIDENRIKMDAVVSTALIEMYA----KCGCIEKSL 396
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 137/345 (39%), Gaps = 76/345 (22%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S V WT+ I+ + + +A F M + G P+ +TLL+GCA
Sbjct: 300 RSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQ------ 353
Query: 99 FLGAMIHGLVCKLGLDRNNV----MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNA 154
LGA+ G +D N + +V TAL++MYAK G ++ + +F+ ++ + +W +
Sbjct: 354 -LGALEQGKWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTTSWTS 412
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+I G G A+ +F+ MQ G++PD
Sbjct: 413 IICGLAMNGKTSEALELFE-------------------------------AMQTCGLKPD 441
Query: 215 YVTIISVLNACANVGTLGIGLWI-HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
+T ++VL+AC + G + G + H + N++ IDL R G ++ A ++
Sbjct: 442 DITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFIDLLGRAGLLQEAEELV 501
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
+++ + N IIV + L+AC G I+
Sbjct: 502 KKLPDQN----NEIIVPL---------------------------YGALLSACRTYGNID 530
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
G R + K+ + + + +Y+ A R ED V M
Sbjct: 531 MGERLATALAKVKSSDSSL--HTLLASIYASADRWEDVRKVRSKM 573
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 173/462 (37%), Positives = 279/462 (60%), Gaps = 11/462 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WTS +S H R G+ E F RM + G +LS D + G +IH
Sbjct: 1075 VTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAA--FDEGKVIH 1132
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V K G + N + V +L+ +Y K G ++ A ++F ++ K+ +WNA+I Y G
Sbjct: 1133 GYVVKGGFE-NYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWC 1191
Query: 166 ESAVRMF------DEMP-VR-DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
+ A +F DE P VR + +SW+A++ GF +G EEALE FR MQ++ V+ + VT
Sbjct: 1192 DEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVT 1251
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I SVL+ CA + L +G IH +V++ N+ V N LI++Y++ G + VF+++
Sbjct: 1252 IASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIE 1311
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+ L+SWN+++ G+ ++G A+ F+ M K+GF+PDGV+F L+ACSHAGL+ +G
Sbjct: 1312 NKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRE 1371
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
FD M K +RV P++EHY C+VDL RAG L++A VV++MP++PN V G+LL +CR
Sbjct: 1372 LFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMH 1431
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
+ +AE + +L+ + +Y+LL+N+YAA G+W+ + K+R + K +G++K PG S
Sbjct: 1432 KNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSW 1491
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
I++ ++ F AG+ H E E +Y +L+ L +++ GY+P+
Sbjct: 1492 IQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPD 1533
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 178/397 (44%), Gaps = 47/397 (11%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W S + + G EA + RM G + + TF ++ CA S+ L +HG
Sbjct: 941 WNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRS--VHGH 998
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V ++G + N+ VG L+ MY K GRMD A VF+ M V+S +WN M+ GY D
Sbjct: 999 VVEMGF-QWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHG 1057
Query: 168 AVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
A MF M + ++WT+LL+ + G E +E F M++ G+ + VL+
Sbjct: 1058 ASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLS 1117
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
++ G IH YV+K F++ + V N+LI LY + G + AR +F + + +VS
Sbjct: 1118 VSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVS 1177
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN++I +A G+ EA F ++K P
Sbjct: 1178 WNALISSYADLGWCDEAFAIFLQLEKTDEYP----------------------------- 1208
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTKGDI 400
V P + + ++ ++ G+ E+AL + M + K N V + S+L+ C +
Sbjct: 1209 ---MVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAAL 1265
Query: 401 ILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKW 434
L + ++V +D N ++ L NMY G +
Sbjct: 1266 HLGREIHGHVV--RSLMDGNILVGNGLINMYTKSGSF 1300
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 110/200 (55%), Gaps = 3/200 (1%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR---DAISWTALLNGFVKRGYFEEALECF 203
+S+F ++ Y G + A R+F+ P+ + + W ++L V GY EEALE +
Sbjct: 902 RSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIY 961
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
M+ GV D T V+ ACA +G+ + +H +V++ F+ N+ V N L+ +Y +
Sbjct: 962 CRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKI 1021
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
G ++ AR+VF+RM R+ VSWN+++ G+A+N A E F M G +P+ V++T L
Sbjct: 1022 GRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLL 1081
Query: 324 TACSHAGLIEDGLRYFDIMK 343
++ + G + + F M+
Sbjct: 1082 SSHARCGQHVETMELFGRMR 1101
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR---TLVSWNSIIVGFAV 293
IH ++ + + ++ +Y+ G + A++VF+ L+ WNSI+
Sbjct: 891 IHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVA 950
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLRYFDIM 342
+G+ EALE + M+K G DG +F + AC+ H ++E G ++
Sbjct: 951 HGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWN--- 1007
Query: 343 KKIYRVSPRIEHYGC-IVDLYSRAGRLEDALNVVENMPMK 381
H G ++ +Y + GR++DA V E M ++
Sbjct: 1008 ----------LHVGNELMGMYGKIGRMDDARKVFERMAVR 1037
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 175/455 (38%), Positives = 268/455 (58%), Gaps = 4/455 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ + G +A F +M +H+T + +LS CA L G +
Sbjct: 200 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRD--LEFGRRVC 257
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + ++ N + + A+LDMY K G ++ A +FDAM K + TW M+DGY D
Sbjct: 258 SYIEENRVNVN-LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 316
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNA 224
E+A + + MP +D ++W AL++ + + G EAL F E+Q+ ++ + +T++S L+A
Sbjct: 317 EAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSA 376
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA VG L +G WIH Y+ K K N V + LI +YS+CG +E AR+VF + KR + W
Sbjct: 377 CAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVW 436
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+++I G A++G EA++ F MQ+ KP+GV+FT ACSH GL+++ F M+
Sbjct: 437 SAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMES 496
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P +HY CIVD+ R+G LE A+ +E MP+ P+ V G+LL AC+ ++ LAE
Sbjct: 497 SYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAE 556
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
L++L+P D +VLL+N+YA GKWD ++R+ M+ G++K+PG SSIEI I
Sbjct: 557 MACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMI 616
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
HEF++GD +H SE +Y L + LK GY PE
Sbjct: 617 HEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPE 651
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/531 (23%), Positives = 222/531 (41%), Gaps = 96/531 (18%)
Query: 5 ATATILPQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAE- 63
+TA L P P+ NPNQ TT + S T + + Q + + R+G ++
Sbjct: 5 STAQPLSLPRHPNFSNPNQP-TTNNERSRHTISLIDRCSSLRQLKQTHAHMIRTGMFSDP 63
Query: 64 ---------------AALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
A+LE+ R PN T+ TL+ A P + A + +
Sbjct: 64 YSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFL-DM 122
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS-----FTWNAMIDGYMRR 162
V N L+ A+ + L + M +KS+ F N++I Y
Sbjct: 123 VSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH-GMAIKSAVGSDVFVANSLIHCYFSC 181
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD++SA ++F + +D +SW +++NGFV++G ++ALE F++M+ V+ +VT++ VL
Sbjct: 182 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 241
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI---------------- 266
+ACA + L G + Y+ + N+ + N ++D+Y++CG I
Sbjct: 242 SACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV 301
Query: 267 ---------------EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ-KE 310
E AR+V M K+ +V+WN++I + NG EAL F+ +Q ++
Sbjct: 302 TWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQK 361
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
K + ++ L+AC+ G +E G R+ K + ++ +YS+ G LE
Sbjct: 362 NIKLNQITLVSTLSACAQVGALELG-RWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEK 420
Query: 371 ALNV----------------------------------VENMPMKPNEVVLGSLLAACRT 396
A V ++ +KPN V ++ AC
Sbjct: 421 AREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSH 480
Query: 397 KGDIILAERLMKYLVDLDPGV---DSNYVLLANMYAAVGKWDGAGKIRRTM 444
G + AE L Y ++ G+ D +Y + ++ G + A K M
Sbjct: 481 TGLVDEAESLF-YKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAM 530
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 284/457 (62%), Gaps = 4/457 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WTS I+ + R+GR A+A F M G P+ + I LS C+ + L G ++
Sbjct: 200 VVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKN--LEFGRLL 257
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM-RVKSSFTWNAMIDGYMRRG 163
H LV K + + +V T L+DMYAK G + A VFDA+ R + WN +IDGY + G
Sbjct: 258 HLLVGKKRIQMTDKLVVT-LIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLG 316
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
++ A +FD+M RD I++ +++ G++ G +AL+ F +++ G+ D T++S+L
Sbjct: 317 HVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLT 376
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA++G L G +H + ++ +++V + L+D+Y +CG ++ A VF RM +R + +
Sbjct: 377 ACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHT 436
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W+++I G A NG +ALE F M+++GF+P V++ LTACSH+ L+ +G ++F+ M+
Sbjct: 437 WSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMR 496
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
++++ P+IEHYGC++DL +R+G L++A+++V+ MPM+PN V+ S+L+ACR +I LA
Sbjct: 497 SLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLA 556
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
++L+ L P D+ YV L N+Y +W A +IR M+ +G++K G SSI +
Sbjct: 557 RHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKKTAGYSSITVAGQ 616
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H+F+ D+SH + I +M+E ++ LK GY P T
Sbjct: 617 VHKFVVNDQSHPWTLEIITMMEEIARRLKSAGYSPAT 653
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 153/312 (49%), Gaps = 35/312 (11%)
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
L M+H + L +V L+ MYA G D A FD + VK + W +I G
Sbjct: 120 LCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGL 179
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+R G ++ A R+ + P R+ +SWT+L+ G+ + G +A+ CF M GVEPD V +I
Sbjct: 180 VRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVI 239
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG--------------- 264
L+AC+ + L G +H V K+ + K+ TLID+Y++CG
Sbjct: 240 GALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRG 299
Query: 265 -------------C----IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
C ++ AR +F +M R ++++NS+I G+ +G + +AL+ F +
Sbjct: 300 QKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQL 359
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
++ G + D + LTAC+ G + G + I ++I V + +VD+Y + G
Sbjct: 360 RRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRI--VEEDVYLVTALVDMYMKCG 417
Query: 367 RLEDALNVVENM 378
R+++A V M
Sbjct: 418 RVDEATAVFHRM 429
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 182/465 (39%), Positives = 273/465 (58%), Gaps = 8/465 (1%)
Query: 40 STVNPT-VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
S V P + W I+ SG +EA L F M L G P+ T ++L D L
Sbjct: 209 SGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLED--L 266
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
+G +IHG V K GL + V +AL+DMY K + VFD M + NA I G
Sbjct: 267 VMGILIHGYVIKQGLVSDKC-VSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFG 325
Query: 159 YMRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
R G +ES++R+F ++ + + +SWT+++ + G EALE FREMQI+GV+P+
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPN 385
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
VTI +L AC N+ L G H + L++ +V V + LID+Y++CG I+ +R F
Sbjct: 386 SVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFD 445
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
+ + LV WN++I G+A++G EA+E F+ MQ+ G KPD +SFT L+ACS +GL E+
Sbjct: 446 GIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEE 505
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
G YF+ M Y + R+EHY C+V L SRAG+LE A ++ MP+ P+ V G+LL++C
Sbjct: 506 GSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPG 454
R ++ L E + L +L+P NY+LL+N+YA+ G W+ ++R MK +G++K PG
Sbjct: 566 RVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPG 625
Query: 455 LSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
S IE+ + +H +AGD+SH + I L+ LS ++K GY PE
Sbjct: 626 CSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPE 670
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 149/296 (50%), Gaps = 8/296 (2%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F++M G P++ + + CA + L +HG+ G D ++ V ++L+ M
Sbjct: 102 FSQMLTRGLMPDNRVLPSAVKACAGLSA--LKPARQVHGIASVSGFDSDS-FVQSSLVHM 158
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR----DAISW 183
Y K ++ A VFD M +W+A++ Y R+G ++ A R+F EM + ISW
Sbjct: 159 YIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISW 218
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
++ GF G + EA+ F +M + G EPD TI SVL A ++ L +G+ IH YV+K
Sbjct: 219 NGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIK 278
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
Q + V + LID+Y +C C QVF +M + S N+ I G + NG V +L
Sbjct: 279 QGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRL 338
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
F ++ +G + + VS+T + CS G + L F M +I V P C++
Sbjct: 339 FRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREM-QIAGVKPNSVTIPCLL 393
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A + D +P + S++ L+ F K F AL F +M G+ PD + S + ACA
Sbjct: 67 ATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAG 126
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ L +H F + V ++L+ +Y +C I A +VF RM + +VSW+++
Sbjct: 127 LSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSAL 186
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+ +A G V EA F+ M G +P+ +S+ G + +H+GL + + F
Sbjct: 187 VAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMF 238
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 20/220 (9%)
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
TI + LN+ +L H ++LK ++ + L+ Y+ C A V +
Sbjct: 17 TIFNCLNS--TTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLV 74
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+ + S++++I F+ AL F+ M G PD A+ AC+ GL
Sbjct: 75 PEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACA-------GL 127
Query: 337 RYFDIMKKIYRVSPRIEHY-------GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
++++ ++ + + +V +Y + ++ DA V + M +P+ V +
Sbjct: 128 SALKPARQVHGIAS-VSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSA 185
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYA 429
L+AA +G + A+RL + D GV N + M A
Sbjct: 186 LVAAYARQGCVDEAKRLFSEMG--DSGVQPNLISWNGMIA 223
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 174/450 (38%), Positives = 270/450 (60%), Gaps = 34/450 (7%)
Query: 52 ISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCK 110
I + ++G + AL + LH PN T+ +L CA + L LG +HG V K
Sbjct: 103 IRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGL--EVLNLGQTVHGSVVK 160
Query: 111 LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR 170
G D ++ V ++ MY+ G I SA +
Sbjct: 161 FGFD-CDIHVQNTMVHMYSCCA------------------------------GGINSARK 189
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+FDEMP D+++W+A++ G+ + G EA+ FREMQ++ V PD +T++S+L+AC ++G
Sbjct: 190 VFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGA 249
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
L +G WI Y+ + + V+V N LID++++CG I A ++F+ M+++T+VSW S+IVG
Sbjct: 250 LELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVG 309
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
A++G EA F M G PD V+F G L+ACSH+GL+E G YF M K Y++ P
Sbjct: 310 MAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVP 369
Query: 351 RIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
+IEHYGC+VD+Y R G +++AL V NMP++PN V+L +L++ACR G+ L E++ K L
Sbjct: 370 KIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLL 429
Query: 411 VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAG 470
+ +P +SNYVLL+N+YA W+ KIR M+ +G++K PG + IEI + I+EF+AG
Sbjct: 430 MKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAG 489
Query: 471 DRSHIESEHIYSMLELLSFDLKLCGYVPET 500
D+SH + + IY M++ + ++K GY P T
Sbjct: 490 DKSHKQHKEIYEMVDEMGREMKKSGYRPST 519
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 168/403 (41%), Gaps = 80/403 (19%)
Query: 84 ITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDA 143
+ LL C P IH + KLGL NN +V T + + D A
Sbjct: 33 LALLQACNALPKL-----TQIHTHILKLGL-HNNPLVLTKFASISSLIHATDYA------ 80
Query: 144 MRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE-ALEC 202
+SF ++A E+ R++D A + L+ + + G+ ++ AL
Sbjct: 81 ----ASFLFSA-----------EADTRLYD------AFLFNTLIRAYAQTGHSKDKALAL 119
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
+ M + P+ T VL ACA + L +G +H V+K F ++ V NT++ +YS
Sbjct: 120 YGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSC 179
Query: 263 C-GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
C G I AR+VF M K V+W+++I G+A G EA+ F MQ PD ++
Sbjct: 180 CAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVS 239
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+AC+ G +E G ++ + + + + +E ++D++++ G + AL + M K
Sbjct: 240 MLSACTDLGALELG-KWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEK 298
Query: 382 ----------------------------------PNEVVLGSLLAACRTKGDIILAERLM 407
P++V LL+AC G L ER
Sbjct: 299 TIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSG---LVERGR 355
Query: 408 KYL------VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
+Y L P ++ +Y + +MY G A + R M
Sbjct: 356 EYFGSMMKKYKLVPKIE-HYGCMVDMYCRTGLVKEALEFVRNM 397
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 142/349 (40%), Gaps = 73/349 (20%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W++ I + R GR EA F M + P+ IT +++LS C D + L LG I
Sbjct: 199 SVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGA--LELGKWI 256
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ + + + V V AL+DM+AK G + A +F AM K+ +W ++I G G
Sbjct: 257 EAYIERHEIHKP-VEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGR 315
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A +F+EM SGV PD V I +L+A
Sbjct: 316 GQEATCLFEEMTS-------------------------------SGVAPDDVAFIGLLSA 344
Query: 225 CANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
C++ G + G + + K ++ ++D+Y R
Sbjct: 345 CSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCR--------------------- 383
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
G V EALE+ +M E P+ V ++AC G + G + I K
Sbjct: 384 ----------TGLVKEALEFVRNMPIE---PNPVILRTLVSACRGHGEFKLGEK---ITK 427
Query: 344 KIYRVSPRIE-HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLL 391
+ + P E +Y + ++Y++ E + E M +K + V GS +
Sbjct: 428 LLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTM 476
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 169/452 (37%), Positives = 280/452 (61%), Gaps = 5/452 (1%)
Query: 43 NP-TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP V WT IS + + + +A F+ + G P+ + +S C + L G
Sbjct: 65 NPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGH--RKDLSNG 122
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
++HG+V + L + + VG AL+DMY++ G +++A VF M +K +W ++++G+++
Sbjct: 123 RIVHGMVFRFELGSDPI-VGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIK 181
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE-PDYVTIIS 220
DIE+A R+FDEMP+R+++SWTA++ G+V+ LE F+EM+ G + P +TI++
Sbjct: 182 CNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVA 241
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VL+ CA++G +G +H YV K + +V V N L+D+Y++ G + A ++FQ M KR
Sbjct: 242 VLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRD 301
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+ SW ++I G A++G ALE F+ M K G P+ V+ L+ACSHAGL+ +G F
Sbjct: 302 VFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRSLFQ 361
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + + + P+I+HYGC+VDL RAG L +A ++E+MP+KP+ V+ SLL+AC G++
Sbjct: 362 KMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHGNL 421
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
LAE K +++L+P D Y+LL N+Y + +W+ A K R+ M+ R ++KKPG S +E+
Sbjct: 422 ALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSWVEV 481
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+HEF+A D H +Y++LE ++ +K
Sbjct: 482 NGVVHEFLAEDAVHCIRADVYTVLEAITEQMK 513
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 134/323 (41%), Gaps = 67/323 (20%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+++ Y + G A ++F+ + D +SWT L++ ++ +A F + SG+ PD
Sbjct: 43 LLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPD 102
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
++ ++AC + L G +H V + + + V N LID+YSR G IE A VF+
Sbjct: 103 SFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFK 162
Query: 275 RMHKRTLVSWNSIIVGF--------------------------AVNGFV-GE----ALEY 303
M + + SW S++ GF + G+V GE LE
Sbjct: 163 TMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLEL 222
Query: 304 FNSMQKEGFK-PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M+ EG P ++ L+ C+ G + G + K + + ++D+Y
Sbjct: 223 FQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKT-NLDLDVTVNNALMDMY 281
Query: 363 SRAGRLEDALNVVENMPMK----------------------------------PNEVVLG 388
+++G L AL + + MP + PNEV L
Sbjct: 282 AKSGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLL 341
Query: 389 SLLAACRTKGDIILAERLMKYLV 411
S+L+AC G ++ L + +V
Sbjct: 342 SVLSACSHAGLVVEGRSLFQKMV 364
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 166/439 (37%), Positives = 270/439 (61%), Gaps = 32/439 (7%)
Query: 62 AEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG 121
+ + L + M +G PN TF +L GCA S L LG +HG V K G + + V V
Sbjct: 107 SNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGS--LRLGKCVHGCVVKFGFEED-VHVL 163
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
L+ MY G DG+ E A ++FD+ P D +
Sbjct: 164 NTLIHMYCCLGE-----------------------DGF------EFAEKVFDDSPKMDTV 194
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
+W+A++ GFV+ G A++ FREMQ+ GV PD +T++SVL+ACA++G L +G W+ YV
Sbjct: 195 TWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYV 254
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
K++ +V++CN LID++++CG ++ A ++F++M RT+VSW S+I G A++G +A+
Sbjct: 255 EKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAV 314
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
F+ M + G PD V+F G L+ACSH+GL++ G YF M++ + + P++EHYGC+VDL
Sbjct: 315 SLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDL 374
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
R G +++A V+ MP +PN+++ +++ AC G++ L E + K L+ +P +SNY
Sbjct: 375 LCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNY 434
Query: 422 VLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIY 481
VLL+N+YA + +W+ K+R M RG++K PG + IE+ + ++EF+AGD+SH + + IY
Sbjct: 435 VLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIY 494
Query: 482 SMLELLSFDLKLCGYVPET 500
M++ + ++K GYVP T
Sbjct: 495 EMVDEMGREIKKAGYVPTT 513
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 182/451 (40%), Positives = 270/451 (59%), Gaps = 4/451 (0%)
Query: 43 NPT-VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP + +TS +S H + EA F R+ G P+ + LS + Q +G
Sbjct: 75 NPDLISFTSLMSLHLQLDNQREAISLFARVVAAGHRPDGFAVVGALSASSGAGDQ--VVG 132
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+HGL+ +LGLD V+VG AL+DMY++ G+ + A VFD M +K TW +M+ GY++
Sbjct: 133 RAVHGLIFRLGLD-GEVVVGNALIDMYSQCGKFESAVKVFDRMSLKDEVTWGSMLHGYIK 191
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
++SA+ FD++PVR ++WTAL+ G V+ ALE F M + G P +VTI+ V
Sbjct: 192 CAGVDSALSFFDQVPVRSVVAWTALITGHVQGRQPVRALELFGRMVLEGHRPTHVTIVGV 251
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+ACA++G L +G IH Y K + N+ V N L+D+Y++ G IE A VFQ + +
Sbjct: 252 LSACADIGALDLGRVIHGYGSKCNASLNIIVSNALMDMYAKSGHIEMAFSVFQEVQSKDS 311
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+W ++I V G +ALE F M + G P+ V+F L+ACSH+GLIE+G+ FD
Sbjct: 312 FTWTTMISCCTVQGDGKKALELFQDMLRAGVVPNSVTFVSVLSACSHSGLIEEGIELFDR 371
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M+++Y++ P +EHYGC++DL R G LE+A ++ +M ++P+ V+ SLL+AC +G+
Sbjct: 372 MRQLYKIDPLLEHYGCMIDLLGRGGLLEEAEALIADMNVEPDIVIWRSLLSACLVRGNNR 431
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LAE K +V +PG D YVLL NMYA+ KW A ++R+ M I KKPG S IEI
Sbjct: 432 LAEIAGKEIVKREPGDDGVYVLLWNMYASSNKWREAREMRQQMLSLKIFKKPGCSWIEID 491
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+HEF+ D++H IY LE +S LK
Sbjct: 492 GAVHEFLVEDKTHDARREIYETLEYMSRQLK 522
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 156/376 (41%), Gaps = 68/376 (18%)
Query: 88 SGCADFPSQCLFLGAM--IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR 145
S C +QC L + IH L GL + V + YA FGR
Sbjct: 15 SVCHHLLAQCKKLRELQRIHALAIAHGLHPHQQSVSCKIFRCYADFGR------------ 62
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
+ A ++FDE+P D IS+T+L++ ++ EA+ F
Sbjct: 63 -------------------VADARKLFDEIPNPDLISFTSLMSLHLQLDNQREAISLFAR 103
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
+ +G PD ++ L+A + G +G +H + + V V N LID+YS+CG
Sbjct: 104 VVAAGHRPDGFAVVGALSASSGAGDQVVGRAVHGLIFRLGLDGEVVVGNALIDMYSQCGK 163
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFA--------------------------VNGFVG- 298
E A +VF RM + V+W S++ G+ + G V
Sbjct: 164 FESAVKVFDRMSLKDEVTWGSMLHGYIKCAGVDSALSFFDQVPVRSVVAWTALITGHVQG 223
Query: 299 ----EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
ALE F M EG +P V+ G L+AC+ G ++ G R S I
Sbjct: 224 RQPVRALELFGRMVLEGHRPTHVTIVGVLSACADIGALDLG-RVIHGYGSKCNASLNIIV 282
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
++D+Y+++G +E A +V + + K + ++++ C +GD A L + + L
Sbjct: 283 SNALMDMYAKSGHIEMAFSVFQEVQSK-DSFTWTTMISCCTVQGDGKKALELFQDM--LR 339
Query: 415 PGVDSNYVLLANMYAA 430
GV N V ++ +A
Sbjct: 340 AGVVPNSVTFVSVLSA 355
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 10/178 (5%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
V V WT+ I+ H + GR ALE F RM L G P H+T + +LS CAD + L L
Sbjct: 207 VRSVVAWTALITGHVQ-GRQPVRALELFGRMVLEGHRPTHVTIVGVLSACADIGA--LDL 263
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +IHG K N++V AL+DMYAK G +++A VF ++ K SFTW MI
Sbjct: 264 GRVIHGYGSKCNASL-NIIVSNALMDMYAKSGHIEMAFSVFQEVQSKDSFTWTTMISCCT 322
Query: 161 RRGDIESAVRMFDEM----PVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEP 213
+GD + A+ +F +M V +++++ ++L+ G EE +E F M Q+ ++P
Sbjct: 323 VQGDGKKALELFQDMLRAGVVPNSVTFVSVLSACSHSGLIEEGIELFDRMRQLYKIDP 380
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 174/420 (41%), Positives = 252/420 (60%), Gaps = 8/420 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V W IS + R R EA + RM T PN T ++ LS CA + L LG
Sbjct: 174 AVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRN--LELGKE 231
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH + LD +M G ALLDMY K G + +A +FDAM VK+ W +M+ GY+ G
Sbjct: 232 IHDYIAS-ELDLTTIM-GNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICG 289
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
++ A +F+ P RD + WTA++NG+V+ FEE + F EMQI GV+PD ++++L
Sbjct: 290 QLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLT 349
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
CA G L G WIH Y+ + K + V LI++Y++CGCIE + ++F + ++ S
Sbjct: 350 GCAQSGALEQGKWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTS 409
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W SII G A+NG EALE F +MQ G KPD ++F L+ACSHAGL+E+G + F M
Sbjct: 410 WTSIICGLAMNGKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMS 469
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL---GSLLAACRTKGDI 400
+Y + P +EHYGC +DL RAG L++A +V+ +P + NE+++ G+LL+ACRT G+I
Sbjct: 470 SMYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNI 529
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+ ERL L + S + LLA++YA+ +W+ K+R MK GI+K PG S+IE+
Sbjct: 530 DMGERLATALAKVKSSDSSLHTLLASIYASADRWEDVRKVRNKMKDLGIKKVPGYSAIEV 589
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 160/362 (44%), Gaps = 68/362 (18%)
Query: 52 ISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKL 111
I +SG A F ++ HG P++ T+ +L G + G +H V K
Sbjct: 80 IKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGE--VREGEKVHAFVVKT 137
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
GL+ + V + +DMYA+ G +++G+ ++
Sbjct: 138 GLEFDP-YVCNSFMDMYAELG----------------------LVEGF---------TQV 165
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLNACANVGT 230
F+EMP RDA+SW +++G+V+ FEEA++ +R M S +P+ T++S L+ACA +
Sbjct: 166 FEEMPDRDAVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRN 225
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
L +G IH Y+ + + N L+D+Y +CG + AR++F M + + W S++ G
Sbjct: 226 LELGKEIHDYI-ASELDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTG 284
Query: 291 FA--------------------------VNGFVG-----EALEYFNSMQKEGFKPDGVSF 319
+ +NG+V E + F MQ G KPD
Sbjct: 285 YVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIV 344
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
LT C+ +G +E G + + + R+ ++++Y++ G +E + + +
Sbjct: 345 VTLLTGCAQSGALEQGKWIHNYIDE-NRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLK 403
Query: 380 MK 381
K
Sbjct: 404 EK 405
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 141/345 (40%), Gaps = 76/345 (22%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S V WT+ I+ + + R E F M + G P+ +TLL+GCA S L
Sbjct: 300 RSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQ--SGAL 357
Query: 99 FLGAMIHGLVCKLGLDRNNV----MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNA 154
G IH + D N + +VGTAL++MYAK G ++ + +F+ ++ K + +W +
Sbjct: 358 EQGKWIHNYI-----DENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTS 412
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+I G G EALE F+ MQ G++PD
Sbjct: 413 II-------------------------------CGLAMNGKPSEALELFKAMQTCGLKPD 441
Query: 215 YVTIISVLNACANVGTLGIGLWI-HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
+T ++VL+AC++ G + G + H + N++ IDL R G ++ A ++
Sbjct: 442 DITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFIDLLGRAGLLQEAEELV 501
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
+++ + N IIV + L+AC G I+
Sbjct: 502 KKLPAQN----NEIIVPL---------------------------YGALLSACRTYGNID 530
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
G R + K+ + + + +Y+ A R ED V M
Sbjct: 531 MGERLATALAKVKSSDSSL--HTLLASIYASADRWEDVRKVRNKM 573
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 3/220 (1%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD A R+F+ + + ++ FVK G F A+ F++++ GV PD T VL
Sbjct: 56 GDFNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVL 115
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+G + G +H +V+K + + VCN+ +D+Y+ G +E QVF+ M R V
Sbjct: 116 KGIGCIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAV 175
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
SWN +I G+ EA++ + M E KP+ + L+AC+ +E G D
Sbjct: 176 SWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDY 235
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ ++ + + ++D+Y + G + A + + M +K
Sbjct: 236 IASELDLTTIMGN--ALLDMYCKCGHVSVAREIFDAMTVK 273
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 186/521 (35%), Positives = 277/521 (53%), Gaps = 65/521 (12%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLG 101
NP +S+ R S + AL L G P+H+T+ ++ C + S + G
Sbjct: 157 NPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE--SSVTWFG 214
Query: 102 AMIHGLVCKLGLDRNNVMVGT------------------------------ALLDMYAKF 131
++H V K G + ++ +V + A++D Y K
Sbjct: 215 LLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKH 274
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
M A +VFD M + +WN MI+GY G I+ A R+FDEMP R+ +SW ++L GFV
Sbjct: 275 VEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFV 334
Query: 192 KRGYFE-------------------------------EALECFREMQISGVEPDYVTIIS 220
K G E EAL F +M+ GV+P T++S
Sbjct: 335 KCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVS 394
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+L+ACA++G L GL +H Y+ + N V L+D+Y++CG I A QVF M +
Sbjct: 395 LLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKD 454
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+++WN+II G A++G V EA + F M++ G +P+ ++F L+ACSHAG++++G + D
Sbjct: 455 VLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLD 514
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M Y + P++EHYGC++DL +RAG LE+A+ ++ MPM+PN LG+LL CR G+
Sbjct: 515 CMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNF 574
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E + K L++L P Y+LL+N+YAA KWD A K+R MK GI K PG+S IE+
Sbjct: 575 ELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIEL 634
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLK-LCGYVPET 500
+H F+AGD SH ES IY L + LK GY +T
Sbjct: 635 KGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADT 675
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 176/470 (37%), Positives = 275/470 (58%), Gaps = 38/470 (8%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
+A L + M + + PN T+ +L C+D S + G +H + K GL + ++ +
Sbjct: 121 KAILLYYEMVVAHSRPNKYTYPAVLKACSD--SGVVAEGVQVHAHLVKHGLGGDGHILSS 178
Query: 123 A-------------------------------LLDMYAKFGRMDLATVVFDAMRVKSSF- 150
A ++D Y +FG ++ A +F+ M +S
Sbjct: 179 AIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMIS 238
Query: 151 TWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG 210
TWNAMI G+ R G +E A FDEM RD ISW+A+++G+++ G F EALE F +MQ
Sbjct: 239 TWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEK 298
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
+ P + SVL+ACAN+G L G WIH Y + + + + +L+D+Y++CG I+ A
Sbjct: 299 IRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAW 358
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
+VF++M + + SWN++I G A++G +A++ F+ M P+ ++F G L AC+H G
Sbjct: 359 EVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---IYPNEITFVGVLNACAHGG 415
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
L++ GL F+ M+K Y V P+IEHYGCIVDL RAG L +A VV ++P +P V G+L
Sbjct: 416 LVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGAL 475
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
L ACR G++ L ER+ K L++L+P Y LL+N+YA G+W+ G++R+ MK RGI+
Sbjct: 476 LGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIK 535
Query: 451 KKPGLSSIEIGSG-IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
PG S I++G G +H+F+ GD SH + + IY ML+ + L++ GY P+
Sbjct: 536 TTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPD 585
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 135/319 (42%), Gaps = 48/319 (15%)
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYA-----KFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
H L+ + G +++ + G+ L+ YA ++ + + VFD +R + F WN MI
Sbjct: 55 HALILRTGHLQDSYIAGS-LVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVC 113
Query: 160 MRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
+ + A+ ++ EM V + ++ A+L G E ++ + G+ D
Sbjct: 114 IENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDG 173
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC---------------------- 253
+ S + A+ G L R +L + VC
Sbjct: 174 HILSSAIRMYASFGRLVEA----RRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFE 229
Query: 254 -----------NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
N +I +SRCG +E AR+ F M +R +SW+++I G+ G EALE
Sbjct: 230 GMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALE 289
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F+ MQKE +P L+AC++ G ++ G R+ K + +VD+Y
Sbjct: 290 IFHQMQKEKIRPRKFVLPSVLSACANLGALDQG-RWIHTYAKRNSIQLDGVLGTSLVDMY 348
Query: 363 SRAGRLEDALNVVENMPMK 381
++ GR++ A V E M K
Sbjct: 349 AKCGRIDLAWEVFEKMSNK 367
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 92/186 (49%), Gaps = 16/186 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W++ I + + G EA F +M P ++LS CA+ LGA+
Sbjct: 269 ISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN-------LGALDQ 321
Query: 106 GLVCKLGLDRNNV----MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
G RN++ ++GT+L+DMYAK GR+DLA VF+ M K +WNAMI G
Sbjct: 322 GRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAM 381
Query: 162 RGDIESAVRMFDEMPVR-DAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPD---YV 216
G E A+ +F +M + + I++ +LN G ++ L F M+ GVEP Y
Sbjct: 382 HGRAEDAIDLFSKMDIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYG 441
Query: 217 TIISVL 222
I+ +L
Sbjct: 442 CIVDLL 447
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 147/317 (46%), Gaps = 24/317 (7%)
Query: 146 VKSSFTWNAMIDGYM-----RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEAL 200
++ S+ +++ Y R ES++R+FD + + W ++ ++ +A+
Sbjct: 64 LQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAI 123
Query: 201 ECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLY 260
+ EM ++ P+ T +VL AC++ G + G+ +H +++K + + ++ I +Y
Sbjct: 124 LLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMY 183
Query: 261 SRCGCIEFARQVF-QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
+ G + AR++ + + V WN++I G+ G V A E F M ++
Sbjct: 184 ASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMIS---TW 240
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM- 378
++ S G++E +FD MK+ +S + ++D Y + G +AL + M
Sbjct: 241 NAMISGFSRCGMVEVAREFFDEMKERDEIS-----WSAMIDGYIQEGCFMEALEIFHQMQ 295
Query: 379 --PMKPNEVVLGSLLAACRTKGDIILAERLMKYL----VDLDPGVDSNYVLLANMYAAVG 432
++P + VL S+L+AC G + + Y + LD + ++ L +MYA G
Sbjct: 296 KEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTS---LVDMYAKCG 352
Query: 433 KWDGAGKIRRTMKGRGI 449
+ D A ++ M + +
Sbjct: 353 RIDLAWEVFEKMSNKEV 369
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 176/446 (39%), Positives = 264/446 (59%), Gaps = 4/446 (0%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S+ V WT+ I + EA F M L PN +T I ++S C+D + L
Sbjct: 317 ESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGN--L 374
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
+G +H V + + R ++ + ALLDMY K + A +FD M K ++W +M++G
Sbjct: 375 EMGKRVHEKVEEKNM-RCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNG 433
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + GD+ESA R FD+ P ++A+ W+A++ G+ + +E+L+ F EM GV P T+
Sbjct: 434 YAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTL 493
Query: 219 ISVLNACANVGTLGIGLWIHRY-VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+SVL+AC + L +G WIH+Y V+ + +V + N ++D+Y++CG I+ A +VF M
Sbjct: 494 VSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMP 553
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+R L+SWN++I G+A NG +A+ F+ M+ GF+P+ ++F LTACSH GLI +G
Sbjct: 554 ERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGRE 613
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YFD M++ Y + P HY C+VDL R G LE+A ++ NMPM+P E G+LL ACR
Sbjct: 614 YFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMH 673
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G++ LA L+ LDP YVLLAN A KW ++R MK +G++K PG S
Sbjct: 674 GNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSL 733
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSM 483
IEI G EF+ D SH +SE IY +
Sbjct: 734 IEIDGGFVEFLVADESHPQSEEIYKL 759
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 144/279 (51%), Gaps = 36/279 (12%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N +I Y RG +++A ++FDE +D ++WT +++G+ EEA+E F M +S VE
Sbjct: 296 NGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVE 355
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P+ VT+I+V++AC+++G L +G +H V +++ + ++ + N L+D+Y +C C+ AR++
Sbjct: 356 PNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDAREL 415
Query: 273 FQRMHKRTLVSWNS-------------------------------IIVGFAVNGFVGEAL 301
F RM + + SW S +I G++ N E+L
Sbjct: 416 FDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESL 475
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIE--DGLRYFDIMKKIYRVSPRIEHYGCIV 359
+ F+ M + G P + L+AC + D + + ++ KI +S +E+ IV
Sbjct: 476 KLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLEN--AIV 533
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
D+Y++ G ++ A V MP + N + +++A G
Sbjct: 534 DMYAKCGSIDAATEVFSTMPER-NLISWNTMIAGYAANG 571
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 7/251 (2%)
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
RM L ++ A V + A+ GD+ A +F+ + + W ++ G+
Sbjct: 178 ARMTLTGIITHAFPVSRVIAFCALAHS----GDLHYAHTIFNRVEQPNTFMWNTMIRGYQ 233
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
A F M VE D + + L AC T+ G ++ V K F +
Sbjct: 234 NARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELL 293
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
V N LI Y+ G ++ ARQVF + +V+W ++I G+A + EA+E F M
Sbjct: 294 VRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSH 353
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
+P+ V+ ++ACS G +E G R + + +K R S + + ++D+Y + L D
Sbjct: 354 VEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCS--LSLHNALLDMYVKCDCLVD 411
Query: 371 ALNVVENMPMK 381
A + + M K
Sbjct: 412 ARELFDRMATK 422
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 262/445 (58%), Gaps = 5/445 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNP-NHITFITLLSGCADFPSQCLFLGAM 103
TV W + + + S EAAL LH + P N TF LL C+ +
Sbjct: 75 TVIWNTMLRAYSNSND-PEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSA--FEETQQ 131
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH + K G V +LL +YA G + A V+F+ + + +WN MIDGY++ G
Sbjct: 132 IHAHIIKRGFGLE-VYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFG 190
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+++ A ++F MP ++ ISWT ++ GFV+ G +EAL ++M ++G++PD +T+ L+
Sbjct: 191 NLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLS 250
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA +G L G WIH Y+ K + K + + L D+Y +CG +E A VF ++ K+ + +
Sbjct: 251 ACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVCA 310
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W +II G A++G EAL++F MQK G P+ ++FT LTACSHAGL E+G F+ M
Sbjct: 311 WTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMS 370
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+Y + P +EHYGC+VDL RAG L++A +E+MP+KPN + G+LL AC+ L
Sbjct: 371 SVYNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLHKHFELG 430
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
+ + K L++LDP Y+ LA++YAA G+W+ ++R +K RG+ PG SSI +
Sbjct: 431 KEIGKILIELDPDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPGCSSITLNGV 490
Query: 464 IHEFMAGDRSHIESEHIYSMLELLS 488
+HEF AGD SH + IY M LL+
Sbjct: 491 VHEFFAGDGSHPHIQEIYGMPNLLA 515
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 137/286 (47%), Gaps = 16/286 (5%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA--TVVFDAMRVKSSFTWNAMIDGYMR 161
IHG + K G RN + V T L+ YA+ ++LA VVFD++ ++ WN M+ Y
Sbjct: 29 IHGQLLKKGTIRNQLTVSTLLVS-YARIELVNLAYTRVVFDSISSPNTVIWNTMLRAYSN 87
Query: 162 RGDIESAVRMFDEM----PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
D E+A+ ++ +M ++ ++ LL FEE + + G +
Sbjct: 88 SNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEETQQIHAHIIKRGFGLEVYA 147
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
S+L A G + + Q ++ N +ID Y + G ++ A ++FQ M
Sbjct: 148 TNSLLRVYAISGNIQSA----HVLFNQLPTRDIVSWNIMIDGYIKFGNLDMAYKIFQAMP 203
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-L 336
++ ++SW ++IVGF G EAL M G KPD ++ + +L+AC+ G +E G
Sbjct: 204 EKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGLGALEQGKW 263
Query: 337 RYFDIMKKIYRVSPRIEHYGCIV-DLYSRAGRLEDALNVVENMPMK 381
+ I K ++ P + GC++ D+Y + G +E AL V + K
Sbjct: 264 IHTYIEKNEIKIDPVL---GCVLTDMYVKCGEMEKALLVFSKLEKK 306
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 155/381 (40%), Positives = 248/381 (65%)
Query: 116 NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM 175
++ V ++L+ +Y G + A VFD M V+ WN MI GY++ GD A +FD M
Sbjct: 111 SDAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFDAM 170
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
P R+ +SWT ++ G+ + E+A+E FR MQ+ G+E D V ++SVL AC ++G + +G
Sbjct: 171 PERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDLGE 230
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
W+HR+V+++ + + N++ID+Y +CGCIE A +VF+ M ++++V+W ++I GFA++G
Sbjct: 231 WVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHG 290
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
+A+E F M++E P+ V+F L+ACSH GL + G YF+IM YR+ PR+EHY
Sbjct: 291 LGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHY 350
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
GC+VDL RAG L++A ++V+NMP+K N + G+LLAA RT GD L E+ + +L++L+P
Sbjct: 351 GCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIELEP 410
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
NY+LL+N++A +W K+R+ M+ RG++ PG SSIE+ +HEF + D SH
Sbjct: 411 NNSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRNVPGASSIEVDGMVHEFTSRDWSHP 470
Query: 476 ESEHIYSMLELLSFDLKLCGY 496
I +L + ++K G+
Sbjct: 471 FIHTICEVLCEIDTNMKSVGF 491
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 184/462 (39%), Positives = 274/462 (59%), Gaps = 8/462 (1%)
Query: 41 TVNPT-VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
T +PT V +TS+I H G A + M G P T + L C L
Sbjct: 93 TPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPAC-----HGLA 147
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
LG +H KL L + V TALL MYA+ G D A +FD M AM+ Y
Sbjct: 148 LGRALHAYAFKLAL-AGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCY 206
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ G ++ A +FD MP +D I W A+++G+ + G EAL FR M SGV+PD V II
Sbjct: 207 AKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAII 266
Query: 220 SVLNACANVGTLGIGLWIHRYVL-KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
L+A A +GT G W+H YV + + N +V LID+Y +CG +E A VF +
Sbjct: 267 LALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGD 326
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +V WN++I G+A++G +ALE F+ ++ +G P ++F G L ACSH+GL+++G ++
Sbjct: 327 KDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQF 386
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M++ Y + P+IEHYGC+VDL RAG +E+A ++V++M + P+ V+ SLLAACR
Sbjct: 387 FQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHK 446
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ L +++ YLV Y+LL+N+YAAVG W+ ++R MK GIQK+PG S+I
Sbjct: 447 NMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAI 506
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
E+G ++EF+AGD SH ++ IY+MLE ++ +K G+VP+T
Sbjct: 507 EVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQT 548
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 130/345 (37%), Gaps = 72/345 (20%)
Query: 86 LLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR 145
LL+GCA L +H + G+D + VG L YA R+DL
Sbjct: 41 LLTGCA-----TLRRTGELHAAAVRAGVDGDRA-VGFRLQRAYAASDRLDLT-------- 86
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
V + P + +T+ ++ RG AL E
Sbjct: 87 -----------------------VTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSE 123
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR--- 262
M G+ P T+ S L AC L +G +H Y K + V L+ +Y+R
Sbjct: 124 MLGRGLIPTSHTLSSSLPACHG---LALGRALHAYAFKLALAGDSYVATALLGMYARGGD 180
Query: 263 ----------------------------CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
G ++ AR++F M + + WN++I G+ +
Sbjct: 181 ADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQH 240
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
G EAL F M + G PD V+ AL+A + G E G +K RV
Sbjct: 241 GRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARV 300
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
++D+Y + G LEDA++V ++ K + VV +++ GD
Sbjct: 301 GTALIDMYCKCGSLEDAVSVFNSIGDK-DIVVWNAMINGYAMHGD 344
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 184/462 (39%), Positives = 274/462 (59%), Gaps = 8/462 (1%)
Query: 41 TVNPT-VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
T +PT V +TS+I H G A + M G P T + L C L
Sbjct: 92 TPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPAC-----HGLA 146
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
LG +H KL L + V TALL MYA+ G D A +FD M AM+ Y
Sbjct: 147 LGRALHAYAFKLAL-AGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCY 205
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ G ++ A +FD MP +D I W A+++G+ + G EAL FR M SGV+PD V II
Sbjct: 206 AKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAII 265
Query: 220 SVLNACANVGTLGIGLWIHRYVL-KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
L+A A +GT G W+H YV + + N +V LID+Y +CG +E A VF +
Sbjct: 266 LALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGD 325
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +V WN++I G+A++G +ALE F+ ++ +G P ++F G L ACSH+GL+++G ++
Sbjct: 326 KDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQF 385
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M++ Y + P+IEHYGC+VDL RAG +E+A ++V++M + P+ V+ SLLAACR
Sbjct: 386 FQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHK 445
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ L +++ YLV Y+LL+N+YAAVG W+ ++R MK GIQK+PG S+I
Sbjct: 446 NMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAI 505
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
E+G ++EF+AGD SH ++ IY+MLE ++ +K G+VP+T
Sbjct: 506 EVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQT 547
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 130/345 (37%), Gaps = 72/345 (20%)
Query: 86 LLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR 145
LL+GCA L +H + G+D + VG L YA R+DL
Sbjct: 40 LLTGCA-----TLRRTGELHAAAVRAGVDGDRA-VGFRLQRAYAASDRLDLT-------- 85
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
V + P + +T+ ++ RG AL E
Sbjct: 86 -----------------------VTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSE 122
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR--- 262
M G+ P T+ S L AC L +G +H Y K + V L+ +Y+R
Sbjct: 123 MLGRGLIPTSHTLSSSLPACHG---LALGRALHAYAFKLALAGDSYVATALLGMYARGGD 179
Query: 263 ----------------------------CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
G ++ AR++F M + + WN++I G+ +
Sbjct: 180 ADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQH 239
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
G EAL F M + G PD V+ AL+A + G E G +K RV
Sbjct: 240 GRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARV 299
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
++D+Y + G LEDA++V ++ K + VV +++ GD
Sbjct: 300 GTALIDMYCKCGSLEDAVSVFNSIGDK-DIVVWNAMINGYAMHGD 343
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 164/409 (40%), Positives = 259/409 (63%), Gaps = 10/409 (2%)
Query: 102 AMIHGLV--------CKL--GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT 151
+MI GL+ CKL + + + +LD Y K G M+ A +F++M ++ +
Sbjct: 17 SMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNKAFGLFESMPERNVVS 76
Query: 152 WNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV 211
W+ M+ GY + GD+E A +FD MPV++ +SWT +++G+ +G ++A+ F +M+ +G+
Sbjct: 77 WSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGL 136
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
+PD T+IS+L +CA G LG+G +H + + +K +V V N L+D+Y++CG ++ A
Sbjct: 137 KPDDGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALS 196
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
VF M K+ LVSWN ++ G A++G +AL+ F+ M++EGF+PD V+ L AC HAG
Sbjct: 197 VFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGF 256
Query: 332 IEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLL 391
+++G+RYF+ M++ Y + P IEHYGC+VDL R GRL++A +V++MP++PN V+ G+LL
Sbjct: 257 VDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLL 316
Query: 392 AACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQK 451
ACR + LAE ++ L L+P NY LL+N++A+ G W +R MK GIQK
Sbjct: 317 GACRMHNAVGLAEEVLDCLFKLEPSDPGNYSLLSNIFASAGDWSSVANVRLQMKNFGIQK 376
Query: 452 KPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
G SSIE+ +HEF D+SH +S+ IY M+ L DLK VP+
Sbjct: 377 PSGASSIEVDDEVHEFTVFDKSHPKSDKIYQMINRLGLDLKRVHVVPKV 425
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 42/243 (17%)
Query: 140 VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
+F M + +WN+MI G ++ G++ A ++FDEMP++DA+SW +L+G+VK G +A
Sbjct: 3 LFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNKA 62
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL 259
F M + NV +T++
Sbjct: 63 FGLFESMP---------------------------------------ERNVVSWSTMVSG 83
Query: 260 YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
Y + G +E AR +F RM + LVSW I+ G+AV G +A+ F M++ G KPD +
Sbjct: 84 YCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTV 143
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKI-YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
L +C+ +GL+ G R +++I Y+ S + + +VD+Y++ G+++ AL+V M
Sbjct: 144 ISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSN--ALVDMYAKCGQVDRALSVFNGM 201
Query: 379 PMK 381
K
Sbjct: 202 SKK 204
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 172/476 (36%), Positives = 274/476 (57%), Gaps = 40/476 (8%)
Query: 62 AEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG 121
++A L F M HG +P+H T+ +L + S+ L++G IH V ++GLD N V VG
Sbjct: 1108 SDALLVFKNMAGHGIDPDHYTYPCVLKASSG--SEDLWVGMQIHAAVVRVGLDLN-VFVG 1164
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV---- 177
L+ MY K G + A V D M + +WN+++ G R G + A+ + EM +
Sbjct: 1165 NGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLK 1224
Query: 178 ---------------------------------RDAISWTALLNGFVKRGYFEEALECFR 204
+ +SW ++ ++ EA++ F
Sbjct: 1225 PDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFL 1284
Query: 205 EMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
+M+ V+PD ++I SVL AC ++ L +G IH YV+++ + N+ + N LID+Y++CG
Sbjct: 1285 QMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCG 1344
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
C+E+AR+VF +M R +VSW S+I + +NG +A+ F+ MQ G PD ++F L+
Sbjct: 1345 CLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLS 1404
Query: 325 ACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNE 384
ACSHAGL+++G YF +M + ++ PRIEH+ C+VDL RAG++++A ++ MPM+PNE
Sbjct: 1405 ACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNE 1464
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
V G+LL+ACR ++I+ L L P YVLL+N+YA G+W+ +R M
Sbjct: 1465 RVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIM 1524
Query: 445 KGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
K +GI+K PG+S+ E+ + +H F+AGD+SH +S+ IY L++L +K GYVPET
Sbjct: 1525 KTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPET 1580
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 152/301 (50%), Gaps = 11/301 (3%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
++ Y G+ S +FDE+P ++ + + ++ +V + +AL F+ M G++PD
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+ T VL A + L +G+ IH V++ NV V N LI +Y +CGC+ A +V
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 1185
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
M R +VSWNS++ G A NG +ALE M+ G KPD + L A ++ L D
Sbjct: 1186 ZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCL--D 1243
Query: 335 GLRYF-DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV---VENMPMKPNEVVLGSL 390
+ + ++ K+ S + + ++ +Y +A+++ +E+ + P+ + + S+
Sbjct: 1244 NVSFVKEMFMKLANKS--LVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASV 1301
Query: 391 LAACRTKGDIILAERLMKYLV--DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
L AC ++L R+ +Y+V L P + L+ +MYA G + A ++ MK R
Sbjct: 1302 LPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALI-DMYAKCGCLEYAREVFDQMKFRD 1360
Query: 449 I 449
+
Sbjct: 1361 V 1361
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 140/338 (41%), Gaps = 73/338 (21%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W I+ + + AEA F +M H +P+ I+ ++L C D + L LG IH
Sbjct: 1261 VSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSA--LLLGRRIH 1318
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + L + N+++ AL+DMYAK G ++ A VFD M+ + +W +MI Y G
Sbjct: 1319 EYVVRKRL-QPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGK- 1376
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
RDA+S F MQ G+ PD + +SVL+AC
Sbjct: 1377 -----------GRDAVS-------------------LFSRMQDLGLNPDSIAFVSVLSAC 1406
Query: 226 ANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
++ G L G + + + ++ ++ ++DL R G ++
Sbjct: 1407 SHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVD----------------- 1449
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
EA + M E P+ + L+AC + GL D +
Sbjct: 1450 --------------EAYGFIKQMPME---PNERVWGALLSACRVYSNMIIGLLAAD---Q 1489
Query: 345 IYRVSPRIE-HYGCIVDLYSRAGRLEDALNVVENMPMK 381
++++ P +Y + ++Y++AGR ED V M K
Sbjct: 1490 LFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTK 1527
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/445 (39%), Positives = 271/445 (60%), Gaps = 10/445 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAM 103
V W IS + + +A F RM + T ++ LS C+ +Q +G
Sbjct: 180 VVSWNVLISSYVGHRKFEDAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQ--EVGEE 237
Query: 104 IHGLV-CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
IH V +L + +G ALLDMY K G +D A +FD M K+ W +M+ GY
Sbjct: 238 IHRYVDAELEM---TTKIGNALLDMYCKCGCVDKARAIFDEMGNKNVICWTSMVSGYASN 294
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G ++ A +F+ PVRD + WTA++NG+V+ F+EAL+ FR+MQI + PD ++++L
Sbjct: 295 GSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLL 354
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
CA G L G W+H Y+ + + V L+D+Y++CGC+E A +VF M +R
Sbjct: 355 KGCAQTGALEQGKWLHGYIHENSITLDRVVGTALVDVYAKCGCVEKALEVFYEMKERDTA 414
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SW S+I G AVNG +AL++F+ M++ GF+PD ++F G LTAC+H GL+E+G RYFD M
Sbjct: 415 SWTSVIYGLAVNGMTSKALDFFSQMEEAGFRPDDITFIGVLTACNHGGLVEEGRRYFDSM 474
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG---SLLAACRTKGD 399
K Y++ P+ EHY C++DL RAG L++A ++E +P++ +++V+ SLL+ACR G+
Sbjct: 475 TKTYKIQPKSEHYSCLIDLLCRAGLLDEAELLLEMIPIESSDIVVPLYCSLLSACRNYGN 534
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ ++ER+ + L ++ S + LLA++YA+ +W+ +RR MK GI+K PG SSIE
Sbjct: 535 LKMSERVGRRLERVEVKDSSVHTLLASVYASANRWEDVTTVRRKMKELGIRKFPGCSSIE 594
Query: 460 IGSGIHEFMAGDRSHIESEHIYSML 484
+ +HEFM G SH+E + I+S+L
Sbjct: 595 VNGVLHEFMVGGPSHMEMDDIHSVL 619
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 152/345 (44%), Gaps = 74/345 (21%)
Query: 68 FTRMTLHGTNPNHITFITLLS--GCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALL 125
F+ + G NP++ T + GC + G +HG V K G D V +++
Sbjct: 104 FSELRKQGLNPDNFTLPPVFKAMGCLGKVVE----GEKVHGYVVKSGFD---ACVCNSVM 156
Query: 126 DMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTA 185
MY G+M++A ++FDE+P RD +SW
Sbjct: 157 GMYGALGKMEVAK-------------------------------KVFDEIPERDVVSWNV 185
Query: 186 LLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
L++ +V FE+A+ FR M+ S ++ D T++S L+AC+ + +G IHRYV
Sbjct: 186 LISSYVGHRKFEDAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIHRYV-DA 244
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA------------ 292
+ + K+ N L+D+Y +CGC++ AR +F M + ++ W S++ G+A
Sbjct: 245 ELEMTTKIGNALLDMYCKCGCVDKARAIFDEMGNKNVICWTSMVSGYASNGSLDEARELF 304
Query: 293 --------------VNGFV-----GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
+NG+V EAL+ F MQ + +PD L C+ G +E
Sbjct: 305 ERSPVRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQTGALE 364
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
G + + R+ +VD+Y++ G +E AL V M
Sbjct: 365 QGKWLHGYIHENSITLDRVVGTA-LVDVYAKCGCVEKALEVFYEM 408
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 135/290 (46%), Gaps = 19/290 (6%)
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
RG I A R+ + + + ++ K F + L F E++ G+ PD T+ V
Sbjct: 63 RGSIRYAERVLGFVQSPCLVMYNLMIKAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPV 122
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
A +G + G +H YV+K F + VCN+++ +Y G +E A++VF + +R +
Sbjct: 123 FKAMGCLGKVVEGEKVHGYVVKSGF--DACVCNSVMGMYGALGKMEVAKKVFDEIPERDV 180
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFD 340
VSWN +I + + +A+ F M++E K D + L+ACS LR +
Sbjct: 181 VSWNVLISSYVGHRKFEDAIAVFRRMRRESNLKADEATVVSTLSACSV-------LRNQE 233
Query: 341 IMKKIYR-VSPRIEHY----GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
+ ++I+R V +E ++D+Y + G ++ A + + M K N + S+++
Sbjct: 234 VGEEIHRYVDAELEMTTKIGNALLDMYCKCGCVDKARAIFDEMGNK-NVICWTSMVSGYA 292
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+ G + A L + D + + + N Y +D A K+ R M+
Sbjct: 293 SNGSLDEARELFERSPVRDIVL---WTAMINGYVQFNLFDEALKLFRKMQ 339
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 45/232 (19%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S V V WT+ I+ + + EA F +M + P++ +TLL GCA + L
Sbjct: 306 RSPVRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQ--TGAL 363
Query: 99 FLGAMIHGLVCK--LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMI 156
G +HG + + + LDR +VGTAL+D+YAK G ++ A VF M+ + + +W
Sbjct: 364 EQGKWLHGYIHENSITLDR---VVGTALVDVYAKCGCVEKALEVFYEMKERDTASW---- 416
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
T+++ G G +AL+ F +M+ +G PD +
Sbjct: 417 ---------------------------TSVIYGLAVNGMTSKALDFFSQMEEAGFRPDDI 449
Query: 217 TIISVLNACANVGTLGIGLWIHRYV--LKQDFKDNVKV--CNTLIDLYSRCG 264
T I VL AC + G + G RY + + +K K + LIDL R G
Sbjct: 450 TFIGVLTACNHGGLVEEG---RRYFDSMTKTYKIQPKSEHYSCLIDLLCRAG 498
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/384 (43%), Positives = 244/384 (63%), Gaps = 8/384 (2%)
Query: 120 VGTALLDMYAK--FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV 177
V +L Y+K G ++LA +FD M K + T + MI Y ESA ++F+ MP
Sbjct: 15 VANNILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMITAYF-----ESAYKVFELMPE 69
Query: 178 RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWI 237
+D ++W +++NGF G EAL ++ M GVEPD T++S+L+ACA + TL +G
Sbjct: 70 KDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLGRRA 129
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSWNSIIVGFAVNGF 296
H Y++K N+ N L+DLY++CG I AR++F M +R +VSW S+IVG AVNGF
Sbjct: 130 HVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGF 189
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG 356
EALE+F M++EG P ++F G L ACSH G++ +G YF MK+ Y + PRIEHYG
Sbjct: 190 GKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYG 249
Query: 357 CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPG 416
C+VDL RAG L++A + +++MP++PN V+ +LL AC G + L L+ L+P
Sbjct: 250 CMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPK 309
Query: 417 VDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIE 476
+YVLL+N+YA+ +W ++RRTM G++K PG S +E+G+ +HEF+ GDR+H +
Sbjct: 310 DSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELGNHVHEFVMGDRTHPQ 369
Query: 477 SEHIYSMLELLSFDLKLCGYVPET 500
SE IY ML ++ LKL GYVP T
Sbjct: 370 SEAIYKMLVEMAMKLKLAGYVPHT 393
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 35/255 (13%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ +G+ EA + RM G P+ T ++LLS CA+ + L LG H
Sbjct: 73 VAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELAT--LVLGRRAH 130
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K+GL++ N+ ALLD+YAK G + A +FD M ++
Sbjct: 131 VYMVKVGLNK-NLHANNALLDLYAKCGTISEARKIFDEMGIE------------------ 171
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
R+ +SWT+L+ G G+ +EALE F++M+ G+ P +T + VL AC
Sbjct: 172 ------------RNVVSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYAC 219
Query: 226 ANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVS 283
++ G + G + R + D ++ ++DL R G ++ A Q M + V
Sbjct: 220 SHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVI 279
Query: 284 WNSIIVGFAVNGFVG 298
W +++ ++G +G
Sbjct: 280 WRTLLGACTIHGHLG 294
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/468 (38%), Positives = 273/468 (58%), Gaps = 35/468 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + I+ + + GR EA L F M PN T +++LS CA S L LG
Sbjct: 223 VKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQ--SNALDLG 280
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ + GL N +V NA+ID Y +
Sbjct: 281 NSMRSWIEDRGLCSNLKLV--------------------------------NALIDMYSK 308
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
GD+++A +FD+M RD ISW ++ G+ ++EAL FREM SGVEP +T +S+
Sbjct: 309 CGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSI 368
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L +CA++G + +G WIH Y+ K + + +LIDLY++CG I ARQVF M ++L
Sbjct: 369 LPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSL 428
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
SWN++I G A++G +A E F+ M +G +P+ ++F G L+AC HAGL++ G ++F
Sbjct: 429 ASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSS 488
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M + Y++SP+ +HYGC++DL RAG E+A ++++NM +KP+ + GSLL ACR G +
Sbjct: 489 MVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVE 548
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
L E + + L +L+P YVLL+N+YA GKWD +IR + RG++K PG ++IE+
Sbjct: 549 LGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVD 608
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
+ +HEF+ GD+ H +SE IY MLE + LK+ G+V +T + LY+ D
Sbjct: 609 NVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADT-SEVLYDMD 655
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 197/398 (49%), Gaps = 38/398 (9%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W S I S A A + F RM G PN TF LL CA S G IH
Sbjct: 97 WNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASA--HEGKQIHAH 154
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG ++V + T+L++MYA+ G M+ A +VFD + + ++ A+I GY G ++
Sbjct: 155 VLKLGF-VSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDR 213
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++FDEMPV+D +SW A++ G+ + G +EAL F +M+ + V P+ TI+SVL+ACA
Sbjct: 214 ARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQ 273
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
L +G + ++ + N+K+ N LID+YS+CG ++ AR++F M +R ++SWN +
Sbjct: 274 SNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVM 333
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+ EAL F M G +P ++F L +C+H G I+ G + K +
Sbjct: 334 IGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFN 393
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK-------------------------- 381
I DLY++ G + A V + M +K
Sbjct: 394 SVSTSLSTSLI-DLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFS 452
Query: 382 --------PNEVVLGSLLAACRTKGDIILAERLMKYLV 411
PNE+ +L+AC+ G + L ++ +V
Sbjct: 453 KMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMV 490
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 32/249 (12%)
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R GDI A+ +F+ + + W +++ G AL F M SGVEP+ T
Sbjct: 75 RSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPF 134
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG---------------- 264
+L +CA + + G IH +VLK F +V + +LI++Y++ G
Sbjct: 135 LLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRD 194
Query: 265 CIEF---------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
I F ARQ+F M + +VSWN++I G+A G EAL F M+K
Sbjct: 195 AISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRK 254
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
P+ + L+AC+ + ++ G ++ + ++ ++D+YS+ G L+
Sbjct: 255 ANVPPNESTIVSVLSACAQSNALDLGNSMRSWIED-RGLCSNLKLVNALIDMYSKCGDLQ 313
Query: 370 DALNVVENM 378
A + ++M
Sbjct: 314 TARELFDDM 322
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 270/455 (59%), Gaps = 4/455 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ + G +A F +M +H+T + +LS CA + L G +
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN--LEFGRQVC 255
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + ++ N + + A+LDMY K G ++ A +FDAM K + TW M+DGY D
Sbjct: 256 SYIEENRVNVN-LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 314
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNA 224
E+A + + MP +D ++W AL++ + + G EAL F E+Q+ ++ + +T++S L+A
Sbjct: 315 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 374
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA VG L +G WIH Y+ K + N V + LI +YS+CG +E +R+VF + KR + W
Sbjct: 375 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVW 434
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+++I G A++G EA++ F MQ+ KP+GV+FT ACSH GL+++ F M+
Sbjct: 435 SAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES 494
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P +HY CIVD+ R+G LE A+ +E MP+ P+ V G+LL AC+ ++ LAE
Sbjct: 495 NYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAE 554
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
L++L+P D +VLL+N+YA +GKW+ ++R+ M+ G++K+PG SSIEI I
Sbjct: 555 MACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMI 614
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
HEF++GD +H SE +Y L + LK GY PE
Sbjct: 615 HEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPE 649
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 190/430 (44%), Gaps = 72/430 (16%)
Query: 5 ATATILPQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTV---QWTSSISRHCRSGRI 61
+TA L P P+ NPNQ P + + + S + V Q + R+G
Sbjct: 5 STAQPLSLPRHPNFSNPNQ-----PTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTF 59
Query: 62 AE----------------AALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGA-- 102
++ A+LE+ R PN + TL+ A P L + A
Sbjct: 60 SDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFL 119
Query: 103 -MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS-----FTWNAMI 156
M+ C N L+ A+ + L + M VKS+ F N++I
Sbjct: 120 DMVSESQC-----YPNKYTFPFLIKAAAEVSSLSLGQSL-HGMAVKSAVGSDVFVANSLI 173
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
Y GD++SA ++F + +D +SW +++NGFV++G ++ALE F++M+ V+ +V
Sbjct: 174 HCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHV 233
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI---------- 266
T++ VL+ACA + L G + Y+ + N+ + N ++D+Y++CG I
Sbjct: 234 TMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAM 293
Query: 267 ---------------------EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
E AR+V M ++ +V+WN++I + NG EAL F+
Sbjct: 294 EEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFH 353
Query: 306 SMQ-KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
+Q ++ K + ++ L+AC+ G +E G R+ K + + ++ +YS+
Sbjct: 354 ELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSK 412
Query: 365 AGRLEDALNV 374
G LE + V
Sbjct: 413 CGDLEKSREV 422
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 243/369 (65%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
+LD Y K G+MD A +FD M ++ +W+ M+ GY + GD+E A +FD+MPV++ +SW
Sbjct: 224 MLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSW 283
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
T +++GF ++G EA+ F +M+ + ++ D T++S+L ACA G LG+G IH +
Sbjct: 284 TIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKN 343
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
+FK ++ N L+D+Y++CG + A VF + + +VSWN+++ G A++G +ALE
Sbjct: 344 NNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALEL 403
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F M++EGF P+ V+ G L AC+HAGLI+DG+RYF M++ Y + P +EHYGC+VDL
Sbjct: 404 FKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLG 463
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
R GRLE+A+ ++ NMPM PN ++ G+LL ACR + LA ++ +LV+L+P N+ +
Sbjct: 464 RKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHNAVELAREVLDHLVELEPTDSGNFSM 523
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSM 483
L+N+YAA G W+ R M+ G +K G SSIE+ + +HEF DRSH +S++IY +
Sbjct: 524 LSNIYAAAGDWNCVANTRLRMRSIGTKKPSGASSIEVNNEVHEFTVFDRSHPKSDNIYQV 583
Query: 484 LELLSFDLK 492
+ L +LK
Sbjct: 584 INGLRHELK 592
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 17/256 (6%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A F+++ + + ++ +A F MQ G D T +L C
Sbjct: 71 ATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTG 130
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC--IEFARQVFQRM-HKRTLVSW 284
L + +H + K F +V V N+LID YS+CG I A+++F M +R +VSW
Sbjct: 131 NVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSW 190
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
NS+I G A G EA + F+ M ++ DG+S+ L G ++D + FD M +
Sbjct: 191 NSMISGLAKGGLYEEARKVFDEMPEK----DGISWNTMLDGYVKVGKMDDAFKLFDEMPE 246
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG----DI 400
VS + +V Y +AG +E A + + MP+K N V +++ KG I
Sbjct: 247 RNVVS-----WSTMVLGYCKAGDMEMARMLFDKMPVK-NLVSWTIIVSGFAEKGLAREAI 300
Query: 401 ILAERLMKYLVDLDPG 416
L +++ K + LD G
Sbjct: 301 SLFDQMEKACLKLDNG 316
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 105/242 (43%), Gaps = 27/242 (11%)
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+S L+ C N+ + +H +LK + ++ V LI +S C + A F ++
Sbjct: 24 LSDLHKCTNLNQVK---QLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQY 80
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +N++I + N +A F +MQ++G D +F L C+ G +
Sbjct: 81 PNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCT-------GNVW 133
Query: 339 FDIMKKIYRVSPRIEHYG---------CIVDLYSRAGR--LEDALNVVENMPMKPNEVVL 387
+++ ++ +IE +G ++D YS+ G + A + +M + + V
Sbjct: 134 LPVIESVH---AQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSW 190
Query: 388 GSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447
S+++ G A ++ + + D G+ N +L + Y VGK D A K+ M R
Sbjct: 191 NSMISGLAKGGLYEEARKVFDEMPEKD-GISWNTML--DGYVKVGKMDDAFKLFDEMPER 247
Query: 448 GI 449
+
Sbjct: 248 NV 249
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/462 (37%), Positives = 279/462 (60%), Gaps = 11/462 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WTS +S H R G+ E F RM + G +LS D + G +IH
Sbjct: 237 VTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAA--FDEGKVIH 294
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V K G + N + V +L+ +Y K G ++ A ++F ++ K+ +WNA+I Y G
Sbjct: 295 GYVVKGGFE-NYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWC 353
Query: 166 ESAVRMF------DEMP-VR-DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
+ A +F DE P VR + +SW+A++ GF +G EEALE FR MQ++ V+ + VT
Sbjct: 354 DEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVT 413
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I SVL+ CA + L +G IH +V++ N+ V N LI++Y++ G + VF+++
Sbjct: 414 IASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIE 473
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+ L+SWN+++ G+ ++G A+ F+ M K+GF+PDGV+F L+ACSHAGL+ +G
Sbjct: 474 NKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRE 533
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
FD M K +RV P++EHY C+VDL RAG L++A VV++MP++PN V G+LL +CR
Sbjct: 534 LFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMH 593
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
+ +AE + +L+ + +Y+LL+N+YAA G+W+ + K+R + K +G++K PG S
Sbjct: 594 KNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSW 653
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
I++ ++ F AG+ H E E +Y +L+ L +++ GY+P+
Sbjct: 654 IQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPD 695
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 189/428 (44%), Gaps = 50/428 (11%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W S + + G EA + RM G + + TF ++ CA S+ L +HG
Sbjct: 103 WNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRS--VHGH 160
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V ++G N + VG L+ MY K GRMD A VF+ M V+S +WN M+ GY D
Sbjct: 161 VVEMGFQWN-LHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHG 219
Query: 168 AVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
A MF M + ++WT+LL+ + G E +E F M++ G+ + VL+
Sbjct: 220 ASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLS 279
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
++ G IH YV+K F++ + V N+LI LY + G + AR +F + + +VS
Sbjct: 280 VSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVS 339
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN++I +A G+ EA F ++K P
Sbjct: 340 WNALISSYADLGWCDEAFAIFLQLEKTDEYP----------------------------- 370
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTKGDI 400
V P + + ++ ++ G+ E+AL + M + K N V + S+L+ C +
Sbjct: 371 ---MVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAAL 427
Query: 401 ILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
L + ++V +D N ++ L NMY G + + ++ + + ++
Sbjct: 428 HLGREIHGHVV--RSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDL---ISWNT 482
Query: 458 IEIGSGIH 465
+ G GIH
Sbjct: 483 MVAGYGIH 490
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 110/200 (55%), Gaps = 3/200 (1%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR---DAISWTALLNGFVKRGYFEEALECF 203
+S+F ++ Y G + A R+F+ P+ + + W ++L V GY EEALE +
Sbjct: 64 RSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIY 123
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
M+ GV D T V+ ACA +G+ + +H +V++ F+ N+ V N L+ +Y +
Sbjct: 124 CRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKI 183
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
G ++ AR+VF+RM R+ VSWN+++ G+A+N A E F M G +P+ V++T L
Sbjct: 184 GRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLL 243
Query: 324 TACSHAGLIEDGLRYFDIMK 343
++ + G + + F M+
Sbjct: 244 SSHARCGQHVETMELFGRMR 263
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR---TLVSWNSIIVGFAV 293
IH ++ + + ++ +Y+ G + A++VF+ L+ WNSI+
Sbjct: 53 IHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVA 112
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLRYFDIM 342
+G+ EALE + M+K G DG +F + AC+ H ++E G ++
Sbjct: 113 HGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWN--- 169
Query: 343 KKIYRVSPRIEHYGC-IVDLYSRAGRLEDALNVVENMPMK 381
H G ++ +Y + GR++DA V E M ++
Sbjct: 170 ----------LHVGNELMGMYGKIGRMDDARKVFERMAVR 199
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/454 (38%), Positives = 273/454 (60%), Gaps = 4/454 (0%)
Query: 40 STVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCL 98
S V V W + I + R G EA F RM G P+ +T I ++SG A + L
Sbjct: 181 SHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQL--RDL 238
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
LG +HG V G+ R V + ++DMY K G ++ A VF+ + K+ +W MI G
Sbjct: 239 ELGRRLHGYVESHGV-RCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVG 297
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + G ++ A ++FDEMP RD W AL+ G+V+ +EAL F +MQ + VEPD +T+
Sbjct: 298 YAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITM 357
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+++L+AC+ +G L +G+W+H Y+ ++ +V + L+D+YS+CG IE A +VF+ + +
Sbjct: 358 VNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPE 417
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ ++W ++I G A +G A++YF M + G +PD ++F G L+AC HAGL+++G +
Sbjct: 418 KNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEF 477
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F +M Y + +++HY C+VDL RAG L++A ++V MPM+P+ VV G+L ACR G
Sbjct: 478 FSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHG 537
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
+I L E+ LV+LDPG YVLLANMYA A K+R M+ G++K PG S I
Sbjct: 538 NITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCI 597
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
E+ +HEF+ D+SH + IY L ++ ++
Sbjct: 598 ELNGVVHEFIVKDKSHTDIAAIYDCLHEITLQIE 631
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 172/373 (46%), Gaps = 68/373 (18%)
Query: 73 LHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFG 132
L P+H+TF LL CA + + N ++G L
Sbjct: 113 LRSARPDHLTFPFLLKACARLQER-----------------NYGNAVLGNVL-------- 147
Query: 133 RMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVK 192
++ F A F NA + + A ++FD VRD +SW L+ G+V+
Sbjct: 148 -----SLGFHA----DVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVR 198
Query: 193 RGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
RG EALE F M G V PD VT+I V++ A + L +G +H YV + V+
Sbjct: 199 RGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVR 258
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA------------------- 292
+ N ++D+Y +CG +E A+ VF+ + K+T+VSW ++IVG+A
Sbjct: 259 LMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERD 318
Query: 293 -------VNGFV-----GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+ G+V EAL F+ MQ+ +PD ++ L+ACS G +E G+
Sbjct: 319 VFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHH 378
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+ + RVS + +VD+YS+ G +E A+ V + +P K N + ++++ G
Sbjct: 379 YIDR-RRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEK-NALTWTAMISGLANHGHA 436
Query: 401 ILAERLMKYLVDL 413
+A + + +++L
Sbjct: 437 DVAIKYFQRMIEL 449
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/478 (36%), Positives = 275/478 (57%), Gaps = 37/478 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHG--TNPNHITFITLLSGCADFPSQCLFLGA 102
+ +T+ I + G EA ++RM PN TF + S C+ F +F G
Sbjct: 98 SFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYPNDFTFTYVFSACSKFNG--VFEGK 155
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATV-VFDAMRVKSSFTWNAMIDGYMR 161
H + K + V +LLD Y K G + + VFD + +WN +I+GY++
Sbjct: 156 QAHAQMIKFPFEFG-VHSWNSLLDFYGKVGEVGIVVRRVFDKIEGPDVVSWNCLINGYVK 214
Query: 162 RGDIESAVRMFDEMPVRDAISWT-------------------------------ALLNGF 190
GD++ A R+FDEMP RD +SWT AL+ G+
Sbjct: 215 SGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCLFDEMPKRNLVSWSALIKGY 274
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
++ G + +ALE F+EMQ++ V+ D V + ++L+ACA +G L G W+H Y+ K K +
Sbjct: 275 IQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRWLHMYIDKHGIKVDA 334
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
+ LID+YS+CG I+ A +VFQ + + W+S+I G A++ F +A+E F M +
Sbjct: 335 HLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEKAIELFAKMIEC 394
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
G +P +++ L AC+H+GL++ GL+ F+ M + + PR++HYGCIVDL RAG L D
Sbjct: 395 GIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVDLLGRAGLLHD 454
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
A VVE MP+K + + +LL+AC+ ++ L E++ + L+ ++P D NYVL +N+YAA
Sbjct: 455 AFRVVETMPVKADPAIWRALLSACKLHRNVELGEQVGRILIKMEPQNDMNYVLFSNVYAA 514
Query: 431 VGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
V +WD +GK+RR MK RG+QK PG SSIE+ +HEF++ D SH +S+ IY +L +L+
Sbjct: 515 VNRWDISGKLRREMKVRGMQKNPGCSSIELNGAVHEFVSRDHSHPQSQVIYELLHILT 572
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 175/402 (43%), Gaps = 56/402 (13%)
Query: 74 HGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR 133
H P+H I+LL C + P + L + +++ T+L+ FGR
Sbjct: 27 HLRKPDHA--ISLLQNCKN-PKDLIQL---------------HTLLIKTSLIKEKYAFGR 68
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV-RDAISWTALLNGFVK 192
+ L+ FD + G + A ++FD + + R++ +T ++ +
Sbjct: 69 LLLSFASFDNL------------------GSLNYAQKLFDTVDIPRNSFMYTTMIKAYAN 110
Query: 193 RGYFEEALECFREMQISG--VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
G EA + M V P+ T V +AC+ + G H ++K F+ V
Sbjct: 111 FGNPREAFAFYSRMLCDQRYVYPNDFTFTYVFSACSKFNGVFEGKQAHAQMIKFPFEFGV 170
Query: 251 KVCNTLIDLYSRCGCIEFA-RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
N+L+D Y + G + R+VF ++ +VSWN +I G+ +G + EA F+ M +
Sbjct: 171 HSWNSLLDFYGKVGEVGIVVRRVFDKIEGPDVVSWNCLINGYVKSGDLDEARRLFDEMPE 230
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
D VS+T L + AG + + FD M K VS + ++ Y + G
Sbjct: 231 R----DVVSWTIMLVGYADAGFLSEASCLFDEMPKRNLVS-----WSALIKGYIQIGCYS 281
Query: 370 DALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-VLLA 425
AL + + M +K +EV++ +LL+AC G + L Y+ VD++ L
Sbjct: 282 KALELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRWLHMYIDKHGIKVDAHLSTALI 341
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
+MY+ G+ D A K+ + G +K SS+ G +H F
Sbjct: 342 DMYSKCGRIDMAWKV---FQETGDKKVFVWSSMIGGLAMHSF 380
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/456 (37%), Positives = 264/456 (57%), Gaps = 33/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ I+ R+GR EA F M G + +T +++L CA + ++ G +
Sbjct: 169 VVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVL--CAAAMLRDVWFGRWV 226
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + G +V VG+AL+DMY+K G D
Sbjct: 227 HGFYVESGRVIWDVYVGSALVDMYSKCGYCD----------------------------- 257
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
AV++F+EMP R+ +SW AL+ G+V+ ++EAL+ F+EM I G+EP+ T+ S L A
Sbjct: 258 --DAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTA 315
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA +G+L G W+H YV + N K+ L+D+YS+CGC++ A VF+++ + + W
Sbjct: 316 CAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPW 375
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G A+ G +L F+ M + +P+GV+F G L+AC+H GL+++GL F +M
Sbjct: 376 TAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMIC 435
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
YR+ P ++HYGC+VDL RAGRLE+A+ +E+MPM+P V G+L + C L E
Sbjct: 436 DYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGE 495
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ +L+ L P Y+LLAN+Y+ KW+ A +RR MKG+G+ K PG S IE+ I
Sbjct: 496 HIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPGCSWIEVNGVI 555
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF+A D+SH ES ++Y MLE +S LKL Y ++
Sbjct: 556 HEFIAFDKSHTESINVYMMLESVSAQLKLATYALDS 591
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 207/458 (45%), Gaps = 79/458 (17%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I S + + ++R+ HG P+ TF LL + ++ F +
Sbjct: 72 WNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPF---QFYAH 128
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ K GLD FDA F N+++ + G ++
Sbjct: 129 IVKFGLD--------------------------FDA------FVQNSLVSAFAHCGYVDC 156
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+ R+F E +D +SWTAL+NG ++ G EALECF EM+ SGVE D VTI+SVL A A
Sbjct: 157 SRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAM 216
Query: 228 VGTLGIGLWIHR-YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ + G W+H YV +V V + L+D+YS+CG + A +VF M R LVSW +
Sbjct: 217 LRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGA 276
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I G+ EAL+ F M EG +P+ + T ALTAC+ G ++ G R+
Sbjct: 277 LIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQG-RWLHEYVDRS 335
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK------------------------- 381
++ + +VD+YS+ G +++AL V E +P K
Sbjct: 336 KLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLF 395
Query: 382 ---------PNEVVLGSLLAACRTKGDIILAERLMKYLV---DLDPGVDSNYVLLANMYA 429
PN V +L+AC G + L + ++ L+P VD +Y + ++
Sbjct: 396 SQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVD-HYGCMVDLLG 454
Query: 430 AVGKWDGAGKIRRTMKGRGIQKKPGL-SSIEIGSGIHE 466
G+ + A K +M ++ PG+ ++ G IH+
Sbjct: 455 RAGRLEEAIKFIESMP---MEPTPGVWGALFSGCMIHK 489
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 4/230 (1%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+ + +FD + W ++ GF + L + ++ GV PD T +L
Sbjct: 53 DLGYTLLLFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLK 112
Query: 224 ACANVGTLG-IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
A + + + H DF V+ N+L+ ++ CG ++ +R++F K+ +V
Sbjct: 113 AFSKLRNENPFQFYAHIVKFGLDFDAFVQ--NSLVSAFAHCGYVDCSRRLFIETAKKDVV 170
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SW ++I G NG EALE F M+ G + D V+ L A + + G
Sbjct: 171 SWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFY 230
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
+ RV + +VD+YS+ G +DA+ V MP + N V G+L+A
Sbjct: 231 VESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTR-NLVSWGALIA 279
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/427 (40%), Positives = 259/427 (60%), Gaps = 5/427 (1%)
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
G PN TF+ + C + + G I K+GL+ +N+ V A++ MYA +G +
Sbjct: 112 GFLPNRYTFVFVFKACGN--GLGVLEGEQIRVHAIKIGLE-SNLFVTNAMIRMYANWGLV 168
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
D A VFD + ++WN MI GY+ G+I A MFDEM RD +SWT ++ G+V+ G
Sbjct: 169 DEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVG 228
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
F+EAL+ F EM +G P+ T+ S L ACAN+ L G WIH Y+ K + K N ++
Sbjct: 229 CFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLA 288
Query: 255 TLIDLYSRCGCIEFARQVFQRMH--KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
+L+D+Y++CG I+FA +VF + K + WN++I G+A++G EA++ F M+ E
Sbjct: 289 SLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKV 348
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
P+ V+F L ACSH L+E+G YF M Y + P IEHYGC+VDL R+G L++A
Sbjct: 349 SPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAE 408
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
V NMPM P+ + G+LL ACR DI +R+ K + +LD +VLLAN+Y+A G
Sbjct: 409 ETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASG 468
Query: 433 KWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+WD A +R+ ++ G +K PG SSIE+ H+F+ GDRSH +++ +Y L+ ++ LK
Sbjct: 469 QWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLK 528
Query: 493 LCGYVPE 499
GYVPE
Sbjct: 529 NAGYVPE 535
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ I+ + + G EA F M G PN T + L+ CA+ + L G I
Sbjct: 214 VVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVA--LDQGRWI 271
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVF-DAMRVK-SSFTWNAMIDGYMRR 162
H + K + N ++ + LLDMYAK G +D A VF D +K + WNAMI GY
Sbjct: 272 HVYIDKSEIKMNERLLAS-LLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMH 330
Query: 163 GDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPD 214
G + A+ +F++M V + +++ ALLN EE F+ M S G+EP+
Sbjct: 331 GKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPE 387
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 68/308 (22%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGF-VKRGYFEEALECFREM-QISGVEPDYVTIIS 220
G + A ++FD++P D + ++ V ++ F M ++SG P+ T +
Sbjct: 63 GSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVF 122
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
V AC N + G I + +K + N+ V N +I +Y+ G ++ AR+VF +
Sbjct: 123 VFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQD 182
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
L SWN +I G+ +G +G A E F+ M + D VS+T + G ++ L D
Sbjct: 183 LYSWNIMIGGYVGSGEIGRAKEMFDEMSER----DVVSWTTIIAGYVQVGCFKEAL---D 235
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT---- 396
+ ++ + P PNE L S LAAC
Sbjct: 236 LFHEMLQTGP------------------------------PPNEFTLASALAACANLVAL 265
Query: 397 -----------KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
K +I + ERL+ L+D MYA G+ D A K+
Sbjct: 266 DQGRWIHVYIDKSEIKMNERLLASLLD--------------MYAKCGEIDFAAKVFHDEY 311
Query: 446 GRGIQKKP 453
G ++ P
Sbjct: 312 GLKLKVWP 319
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 69/178 (38%), Gaps = 28/178 (15%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I + G+ EA F +M + +PN +TF+ LL+ C+ HG
Sbjct: 320 WNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACS-------------HGK 366
Query: 108 VCKLGLDRNNVMVGT-----------ALLDMYAKFGRMDLA-TVVFDAMRVKSSFTWNAM 155
+ + G M + ++D+ + G + A VF+ + W A+
Sbjct: 367 LVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGAL 426
Query: 156 IDGYMRRGDIESAVR---MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG 210
+ DIE R + E+ L N + G ++EA +++++SG
Sbjct: 427 LGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSG 484
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/462 (37%), Positives = 279/462 (60%), Gaps = 11/462 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WTS +S H R G+ E F RM + G +LS D + G +IH
Sbjct: 237 VTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAA--FDEGKVIH 294
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V K G + N + V +L+ +Y K G ++ A ++F ++ K+ +WNA+I Y G
Sbjct: 295 GYVVKGGFE-NYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWC 353
Query: 166 ESAVRMF------DEMP-VR-DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
+ A +F DE P VR + +SW+A++ GF +G EEALE FR MQ++ V+ + VT
Sbjct: 354 DEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVT 413
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I SVL+ CA + L +G IH +V++ N+ V N LI++Y++ G + VF+++
Sbjct: 414 IASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIE 473
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+ L+SWN+++ G+ ++G A+ F+ M K+GF+PDGV+F L+ACSHAGL+ +G
Sbjct: 474 NKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRE 533
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
FD M K +RV P++EHY C+VDL RAG L++A VV++MP++PN V G+LL +CR
Sbjct: 534 LFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMH 593
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
+ +AE + +L+ + +Y+LL+N+YAA G+W+ + K+R + K +G++K PG S
Sbjct: 594 KNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSW 653
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
I++ ++ F AG+ H E E +Y +L+ L +++ GY+P+
Sbjct: 654 IQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPD 695
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 178/397 (44%), Gaps = 47/397 (11%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W S + + G EA + RM G + + TF ++ CA S+ L +HG
Sbjct: 103 WNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRS--VHGH 160
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V ++G + N+ VG L+ MY K GRMD A VF+ M V+S +WN M+ GY D
Sbjct: 161 VVEMGF-QWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHG 219
Query: 168 AVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
A MF M + ++WT+LL+ + G E +E F M++ G+ + VL+
Sbjct: 220 ASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLS 279
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
++ G IH YV+K F++ + V N+LI LY + G + AR +F + + +VS
Sbjct: 280 VSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVS 339
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN++I +A G+ EA F ++K P
Sbjct: 340 WNALISSYADLGWCDEAFAIFLQLEKTDEYP----------------------------- 370
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTKGDI 400
V P + + ++ ++ G+ E+AL + M + K N V + S+L+ C +
Sbjct: 371 ---MVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAAL 427
Query: 401 ILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKW 434
L + ++V +D N ++ L NMY G +
Sbjct: 428 HLGREIHGHVV--RSLMDGNILVGNGLINMYTKSGSF 462
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 110/200 (55%), Gaps = 3/200 (1%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR---DAISWTALLNGFVKRGYFEEALECF 203
+S+F ++ Y G + A R+F+ P+ + + W ++L V GY EEALE +
Sbjct: 64 RSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIY 123
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
M+ GV D T V+ ACA +G+ + +H +V++ F+ N+ V N L+ +Y +
Sbjct: 124 CRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKI 183
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
G ++ AR+VF+RM R+ VSWN+++ G+A+N A E F M G +P+ V++T L
Sbjct: 184 GRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLL 243
Query: 324 TACSHAGLIEDGLRYFDIMK 343
++ + G + + F M+
Sbjct: 244 SSHARCGQHVETMELFGRMR 263
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR---TLVSWNSIIVGFAV 293
IH ++ + + ++ +Y+ G + A++VF+ L+ WNSI+
Sbjct: 53 IHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVA 112
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLRYFDIM 342
+G+ EALE + M+K G DG +F + AC+ H ++E G ++
Sbjct: 113 HGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWN--- 169
Query: 343 KKIYRVSPRIEHYGC-IVDLYSRAGRLEDALNVVENMPMK 381
H G ++ +Y + GR++DA V E M ++
Sbjct: 170 ----------LHVGNELMGMYGKIGRMDDARKVFERMAVR 199
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 172/460 (37%), Positives = 271/460 (58%), Gaps = 7/460 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
++ + S I + R G + M G ++ TF +L + S +++G +
Sbjct: 136 SLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLS--VWMGKCV 193
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HGL+ ++GL + ++ V T+L+ +Y K G ++ A VFD M ++ +WNA++ GY + G
Sbjct: 194 HGLILRIGL-QFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGC 252
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM--QISGVEPDYVTIISVL 222
I++A+ +F+ MP R+ +SWT +++G+ + G ++AL F EM + SGV P++VTI+SVL
Sbjct: 253 IDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVL 312
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK--RT 280
ACA + TL G IH + N V L +Y++CG + AR F ++++ +
Sbjct: 313 PACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKN 372
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
L++WN++I +A G +A+ F M + G +PD ++FTG L+ CSH+GL++ GL+YF+
Sbjct: 373 LIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFN 432
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M Y ++PR+EHY C+ DL RAGRL +A +V MPM + GSLLAACR ++
Sbjct: 433 HMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNL 492
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+AE + L L+P NYVLL+NMYA G+W K+R +K +G +K PG S IEI
Sbjct: 493 EMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEI 552
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
H F+ GD SH + + IY LE L +K GY P+T
Sbjct: 553 NGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDT 592
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 119/257 (46%), Gaps = 34/257 (13%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
M+ Y GDI+S+V +F+ + ++ + +++ + + G+ E + + M G D
Sbjct: 111 MVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGD 170
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC----------- 263
Y T VL + + ++ +G +H +L+ + ++ V +LI LY +C
Sbjct: 171 YFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFD 230
Query: 264 --------------------GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
GCI+ A +F+RM R +VSW ++I G++ +G +AL
Sbjct: 231 NMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSL 290
Query: 304 FNSMQKE--GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
F+ M KE G +P+ V+ L AC+ +E G + ++ ++ ++ + +
Sbjct: 291 FDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRM-GLNSNASVLIALTAM 349
Query: 362 YSRAGRLEDALNVVENM 378
Y++ G L DA N + +
Sbjct: 350 YAKCGSLVDARNCFDKL 366
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 100/272 (36%), Gaps = 70/272 (25%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLH-------------------------- 74
T+ W + ++ + +SG I A F RM
Sbjct: 233 TIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFD 292
Query: 75 -------GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
G PN +T +++L CA + L G IH L C++GL+ +N V AL M
Sbjct: 293 EMVKEDSGVRPNWVTIMSVLPACAQLST--LERGRQIHELACRMGLN-SNASVLIALTAM 349
Query: 128 YAKFGRMDLATVVFDAM--RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTA 185
YAK G + A FD + K+ WN MI Y G AV F
Sbjct: 350 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTF------------- 396
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL-WIHRYVLKQ 244
REM +G++PD +T +L+ C++ G + +GL + +
Sbjct: 397 ------------------REMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTY 438
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
V+ + DL R G + A ++ M
Sbjct: 439 SINPRVEHYACVADLLGRAGRLAEASKLVGEM 470
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 113/286 (39%), Gaps = 54/286 (18%)
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P ++ V + L +G +H ++L + + V + ++ Y+ G I+ + V
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA------- 325
F + + + + +NS+I +A GF + + SM GF D +F L +
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187
Query: 326 ----CSHAGLIEDGLRYFDI-----MKKIYRVSPRIEHYGCIVDL--------------- 361
C H ++ GL+ FD+ + +Y I G + D
Sbjct: 188 WMGKCVHGLILRIGLQ-FDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAG 246
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
Y+++G ++ AL + E MP + N V ++++ G A L +V D GV N+
Sbjct: 247 YTKSGCIDAALAIFERMPWR-NIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNW 305
Query: 422 VLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
V + ++ A + LS++E G IHE
Sbjct: 306 VTIMSVLPACAQ---------------------LSTLERGRQIHEL 330
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 166/455 (36%), Positives = 282/455 (61%), Gaps = 9/455 (1%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTL---HGTNP---NHITFITLLSGCAD 92
K +P +++ R + ++ A+ + L HG NP + TF ++ CA
Sbjct: 44 KRVADPNAFLYNAMIRAYKHNKVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKXCAG 103
Query: 93 FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTW 152
C LG +HG K G ++N ++ +L++MY K +D A VF+ M + + +W
Sbjct: 104 L--MCYNLGKQVHGHAFKFG-PKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSW 160
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N +I G++R G + A +F+E+ + SWTA+++G+ + G ALE FR MQ+ +E
Sbjct: 161 NTLISGHVRLGQMRRARAIFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIE 220
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
D ++++SVL ACA +G L +G WIH Y K F ++ VCN LI++Y++ G ++ R++
Sbjct: 221 LDEISLVSVLPACAQLGALELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRL 280
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F +M++R ++SW+++IVG A +G EA+E F MQK +P+ ++F G L+AC+HAGL+
Sbjct: 281 FHKMNERDVISWSTMIVGLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLL 340
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
+GL YF+ M++ + P +EHYGC+V+L +GRL+ AL +++ MPMKP+ + G L +
Sbjct: 341 NEGLGYFESMERDDNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSS 400
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
+CR+ G++ + M++L++L+P NY+ L+N+YA +GKWDG ++R+ M + + K
Sbjct: 401 SCRSHGNLEIVAIAMEHLLELEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYMNKT 460
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
PG SSIE+ + + E+ +GD S S+ IY +L+LL
Sbjct: 461 PGCSSIEVDNMVQEYASGDDSKPFSKAIYRVLKLL 495
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 152/373 (40%), Gaps = 81/373 (21%)
Query: 148 SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM- 206
SSF M+D G+ E A +F + +A + A++ + + A+ ++M
Sbjct: 19 SSFLVTKMVDMCNHHGETEYANLLFKRVADPNAFLYNAMIRAYKHNKVYILAITVHKQML 78
Query: 207 -QISGVE---PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
G PD T V+ CA + +G +H + K K N + N+L+++Y +
Sbjct: 79 GHSHGENPXFPDKFTFPFVVKXCAGLMCYNLGKQVHGHAFKFGPKSNTVIENSLVEMYVK 138
Query: 263 CGCIEFARQVFQRMHKRTLVSWNS-------------------------------IIVGF 291
C ++ A +VF+ M +R VSWN+ I+ G+
Sbjct: 139 CDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEELQDKTIFSWTAIVSGY 198
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI-------MKK 344
A G ALE+F MQ + D +S L AC+ G +E G ++ I ++
Sbjct: 199 ARIGCHAVALEFFRRMQMVDIELDEISLVSVLPACAQLGALELG-KWIHIYADKAGFLRD 257
Query: 345 IYRVSPRIEHYG-------------------------CIVDLYSRAGRLEDALNVVENM- 378
I + IE Y IV L + GR +A+ + + M
Sbjct: 258 ICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMIVGL-ANHGRAREAIELFQEMQ 316
Query: 379 --PMKPNEVVLGSLLAACRTKGDIILAERL-----MKYLVDLDPGVDSNYVLLANMYAAV 431
++PN + LL+AC G +L E L M+ +++PGV+ +Y L N+
Sbjct: 317 KAKVEPNIITFVGLLSACAHAG--LLNEGLGYFESMERDDNIEPGVE-HYGCLVNLLGLS 373
Query: 432 GKWDGAGKIRRTM 444
G+ D A ++ + M
Sbjct: 374 GRLDQALELIKKM 386
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/459 (38%), Positives = 277/459 (60%), Gaps = 6/459 (1%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
NP + WT+ I + G ++E+ +TRM G P TF L C + + LG
Sbjct: 106 NPFL-WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACG--AALNMDLGK 162
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H +G +++ VG +++D+Y K G + A VFD M + +W +I Y +
Sbjct: 163 QVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKY 222
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD+ESA +FD++P++D ++WTA++ G+ + G +EALE F++MQ G+E D VT+ V+
Sbjct: 223 GDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVI 282
Query: 223 NACANVGTLGIGLWIHRYVLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+ACA +G + WI + F NV V + LID+YS+CG + A +VF+ M +R
Sbjct: 283 SACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERN 342
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+ S++S+I+G+A++G AL+ F+ M K +P+ V+F G L+ACSHAGL+E G + F
Sbjct: 343 VFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFA 402
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M+K + V+P +HY C+VDL RAG LE+AL++V+ MPM+PN V G+LL ACR G+
Sbjct: 403 KMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNP 462
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+A+ L L+P NY+LL+N+YA+ G+W+ K+R+ ++ +G +K PG S E
Sbjct: 463 DIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEG 522
Query: 461 GSG-IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+G IH+F AGD +H S I L+ L L+ GY P
Sbjct: 523 KNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKP 561
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 162/415 (39%), Gaps = 109/415 (26%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAK----FGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+H + + GL + + ++ T L+ M K G L +VF + + F W AMI GY
Sbjct: 61 VHAHIIRNGLSQCSYVL-TKLIRMLTKVDVPMGSYPL--LVFGQVNYPNPFLWTAMIRGY 117
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+G E+ + M+ GV P T
Sbjct: 118 -------------------------------ALQGLLSESTNFYTRMRRDGVGPVSFTFS 146
Query: 220 SVLNACANVGTLGIGLWIH-RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
++ AC + +G +H + +L F ++ V N++IDLY +CG + AR+VF M +
Sbjct: 147 ALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSE 206
Query: 279 RTLVSWNSIIV-------------------------------GFAVNGFVGEALEYFNSM 307
R +VSW +IV G+A NG EALEYF M
Sbjct: 207 RDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKM 266
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI-YRVSPRIEHYGCIVDLYSRAG 366
Q G + D V+ G ++AC+ G ++ DI ++ + S + ++D+YS+ G
Sbjct: 267 QDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCG 326
Query: 367 RLEDALNVVENMP----------------------------------MKPNEVVLGSLLA 392
++A V E M ++PN+V +L+
Sbjct: 327 SPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILS 386
Query: 393 ACRTKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
AC G + +L M+ + P D +Y + ++ G + A + +TM
Sbjct: 387 ACSHAGLVEQGRQLFAKMEKFFGVAPSPD-HYACMVDLLGRAGCLEEALDLVKTM 440
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 62/338 (18%), Positives = 126/338 (37%), Gaps = 81/338 (23%)
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI--EFARQVFQR 275
++S+L+ C + +H ++++ V LI + ++ + VF +
Sbjct: 45 LMSILHDCTLFSQIK---QVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQ 101
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
++ W ++I G+A+ G + E+ ++ M+++G P +F+ AC A ++ G
Sbjct: 102 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 161
Query: 336 LRYF-------DIMKKIYRVSPRIEHY------GC------------------IVDLYSR 364
+ +Y + I+ Y GC ++ Y++
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAK 221
Query: 365 AGRLEDALNVVENMPMK----------------------------------PNEVVLGSL 390
G +E A + +++P+K +EV L +
Sbjct: 222 YGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGV 281
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGR 447
++AC G + A + G N V+ L +MY+ G D A K+ MK R
Sbjct: 282 ISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKER 341
Query: 448 GIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
+ SS+ +G +H R+H + + ML+
Sbjct: 342 NVFS---YSSMILGYAMH-----GRAHSALQLFHDMLK 371
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 180/502 (35%), Positives = 276/502 (54%), Gaps = 11/502 (2%)
Query: 2 NSSATATILPQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRI 61
NS++ + + N NLTT + N W S I+ RSG
Sbjct: 5 NSTSVVITFSWKIYRRRYSNNPNLTTLFNKYVDKTN-------VFSWNSVIAELARSGDS 57
Query: 62 AEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG 121
EA F+ M PN TF + C+ L G H G + ++ V
Sbjct: 58 VEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLD--LHSGRQAHQQALIFGFE-PDLFVS 114
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
+AL+DMY+K G + A +FD + ++ +W +MI GY++ D A+R+FD M RD I
Sbjct: 115 SALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVI 174
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRY 240
SW +++ + + G E++E F M G + + VT+ +VL ACA+ G+ +G IH
Sbjct: 175 SWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQ 234
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
V+K + NV V ++ID+Y +CG +E AR+ F RM ++ + SW++++ G+ ++G EA
Sbjct: 235 VIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEA 294
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
LE F M G KP+ ++F L ACSHAGL+E+G +F M + V P +EHYGC+VD
Sbjct: 295 LEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVD 354
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
L RAG L++A ++++ M ++P+ VV G+LL ACR ++ L E + L +LDP
Sbjct: 355 LLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGY 414
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHI 480
YVLL+N+YA G+W+ ++R MK G+ K PG S ++I +H F+ GDR H + E I
Sbjct: 415 YVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKI 474
Query: 481 YSMLELLSFDLKLCGYVPETVA 502
Y LE LS L+ GYVP+ +
Sbjct: 475 YEYLEKLSMKLQEVGYVPDMTS 496
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/459 (38%), Positives = 273/459 (59%), Gaps = 14/459 (3%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF--LGA 102
V W + +S + ++G E F M G P+ T++T++S C+ CL L
Sbjct: 225 VVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVR 284
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM-RVKSSFTWNAMIDGYMR 161
+H +L N V TALLDMYAK G + A +FD + ++S TWNAMI Y R
Sbjct: 285 TLHQKQIQL-----NCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTR 339
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIIS 220
G+++SA +F+ MP R+ ++W +++ G+ + G A+E F+EM + PD VT++S
Sbjct: 340 VGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVS 399
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
V++AC ++G L +G W+ R++ + K ++ N +I +YSRCG +E A++VFQ M R
Sbjct: 400 VISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRD 459
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+VS+N++I GFA +G EA+ ++M++ G +PD V+F G LTACSHAGL+E+G + F+
Sbjct: 460 VVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFE 519
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+K P I+HY C+VDL R G LEDA +E MPM+P+ V GSLL A R +
Sbjct: 520 SIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQV 574
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E L +L+P N++LL+N+YA+ G+W +IR MK G++K G S +E
Sbjct: 575 ELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEY 634
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
G +H+F+ DRSH S+ IY +L L ++ GY+ +
Sbjct: 635 GGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIAD 673
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 137/529 (25%), Positives = 224/529 (42%), Gaps = 117/529 (22%)
Query: 40 STVNPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
ST+NP V +TS + + A+ L F M G P+ + L+ +
Sbjct: 59 STLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNG----- 113
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD---------------- 142
G H V KLG ++ V A++DMYA+ G + A VFD
Sbjct: 114 --GIGFHAHVLKLG-HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 143 -----------------AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTA 185
M ++ TW AM+ GY + D+E+A R FD MP R +SW A
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNA 230
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
+L+G+ + G EE L F EM +G+EPD T ++V++AC++ G + + R + ++
Sbjct: 231 MLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQ 290
Query: 246 FKDNVKVCNTLIDLYSRCGCI--------------------------------EFARQVF 273
+ N V L+D+Y++CG I + AR++F
Sbjct: 291 IQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELF 350
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLI 332
M R +V+WNS+I G+A NG A+E F M + PD V+ ++AC H G +
Sbjct: 351 NTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGAL 410
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP------------- 379
E G + + ++ I + ++ +YSR G +EDA V + M
Sbjct: 411 ELGNWVVRFLTE-NQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISG 469
Query: 380 ---------------------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD 418
++P+ V +L AC G +L E + DP +D
Sbjct: 470 FAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAG--LLEEGRKVFESIKDPAID 527
Query: 419 SNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL-SSIEIGSGIHE 466
+Y + ++ VG+ + A +RTM+ ++ G+ S+ S IH+
Sbjct: 528 -HYACMVDLLGRVGELEDA---KRTMERMPMEPHAGVYGSLLNASRIHK 572
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 167/414 (40%), Positives = 253/414 (61%), Gaps = 4/414 (0%)
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLAT 138
+ T+ LL C + LG +H V + G + + V V +L++MY + G + A
Sbjct: 115 DRFTYPFLLKACGALAAS--RLGRQVHAHVARSGCESHAV-VQNSLIEMYTRCGDLSTAR 171
Query: 139 VVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE 198
FD MR K +WN +I + R G + A +F MP + +SWTAL++G+ G F
Sbjct: 172 KAFDGMREKDVVSWNTLISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTG 231
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
A+E FR MQ+ G EPD V+I++VL ACA +G L +G WI+ Y K V +CN L++
Sbjct: 232 AVEVFRLMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALME 291
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGV 317
+Y++CGCIE A Q+F M ++ ++SW++ I G A +G EA+ F M +EG P+G+
Sbjct: 292 MYAKCGCIEEALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGI 351
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
+F G L+ACSHAGL+++GLRY D MK+ Y V P +EHYGC+VDL R+GR++ AL+ +
Sbjct: 352 TFVGLLSACSHAGLVDEGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRG 411
Query: 378 MPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGA 437
MP+ P+ + GSLL+ACR+ GD+ A + LV+L+PG N V+LAN+Y A G+W
Sbjct: 412 MPVPPDGKIWGSLLSACRSHGDVETAVVAAERLVELEPGDVGNLVMLANVYGAAGRWGEV 471
Query: 438 GKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
R+ ++ R +K PG S IE+ + + EF+AG E I ++L++L+ L
Sbjct: 472 ASTRKEIRSRSTRKTPGCSMIEVDNVVREFVAGQDLGPELGGIATVLDILASKL 525
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 153/359 (42%), Gaps = 82/359 (22%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEP--------DYVTIISVL 222
+F ++P + A++ + + +A+E + M P D T +L
Sbjct: 64 VFAQIPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLL 123
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC + +G +H +V + + + V N+LI++Y+RCG + AR+ F M ++ +V
Sbjct: 124 KACGALAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVV 183
Query: 283 SWNSIIVGFA--------------------------VNGF--VGE---ALEYFNSMQKEG 311
SWN++I A V+G+ VG+ A+E F MQ EG
Sbjct: 184 SWNTLISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEG 243
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYF------DIMKKIYRVSPRIEHY---GCI---- 358
F+PD VS L AC+ G +E G + ++ K+Y + +E Y GCI
Sbjct: 244 FEPDDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEAL 303
Query: 359 ----------VDLYSRA-------GRLEDALNVVENMPMK----PNEVVLGSLLAACRTK 397
V +S A GR +A+ + E M + PN + LL+AC
Sbjct: 304 QLFHGMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHA 363
Query: 398 GDIILAERLMKYLVDL--DPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKG-RGIQKKP 453
G L + ++YL + D GV+ + +G+ +G+I+R + RG+ P
Sbjct: 364 G---LVDEGLRYLDQMKEDYGVEPGVEHYGCVVDLLGR---SGRIQRALDTIRGMPVPP 416
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 21/242 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM- 103
V W + IS H R G++ A F M + +++ L+SG + + F GA+
Sbjct: 182 VVSWNTLISAHARMGQMRRARELFYSM----PDKTVVSWTALVSG---YTAVGDFTGAVE 234
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR----VKSSFTWNAMIDGY 159
+ L+ G + ++V + A+L A+ G ++L ++ + + NA+++ Y
Sbjct: 235 VFRLMQMEGFEPDDVSI-VAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMY 293
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTI 218
+ G IE A+++F M +D ISW+ + G G EA+ F M G V P+ +T
Sbjct: 294 AKCGCIEEALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITF 353
Query: 219 ISVLNACANVGTLGIGLWIHRYV--LKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+ +L+AC++ G + GL RY+ +K+D+ + V+ ++DL R G I+ A +
Sbjct: 354 VGLLSACSHAGLVDEGL---RYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIR 410
Query: 275 RM 276
M
Sbjct: 411 GM 412
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHG-TNPNHITFITLLSGC--ADFPSQCL-FL 100
+ W+++I GR EA F M G PN ITF+ LLS C A + L +L
Sbjct: 314 VISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAGLVDEGLRYL 373
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRV-KSSFTWNAMIDGY 159
M + G++ +V D+ + GR+ A M V W +++
Sbjct: 374 DQMKEDYGVEPGVEHYGCVV-----DLLGRSGRIQRALDTIRGMPVPPDGKIWGSLLSAC 428
Query: 160 MRRGDIESAV 169
GD+E+AV
Sbjct: 429 RSHGDVETAV 438
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 185/473 (39%), Positives = 276/473 (58%), Gaps = 17/473 (3%)
Query: 39 KSTVNPT-VQWTSSISRHCRSG--RIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPS 95
+ T +PT V +TS+I H G R A A L ++ HG P T L C
Sbjct: 80 RRTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPACG---- 135
Query: 96 QCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF-TWNA 154
CL +G +HG KL L V TALL MYA+ G A +FD MR + A
Sbjct: 136 -CLAVGRALHGYAVKLALS-GEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTA 193
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
M+ Y + G ++ A +FD +P +D + W A+++G+ + G EAL FR+M SGVEPD
Sbjct: 194 MLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPD 253
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVL----KQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
V+++ L+A A +GT G W+H +V + + N +V L+D+Y +CG +E A
Sbjct: 254 EVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAV 313
Query: 271 QVFQRMH---KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
VF+ + R +V+WN++I G+A++G EALE F ++ +G P ++F G L ACS
Sbjct: 314 AVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACS 373
Query: 328 HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
H+GL+++G F M++ Y + P++EHYGC+VDL RAGR+E+A ++V++M KP+ +
Sbjct: 374 HSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMW 433
Query: 388 GSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447
SLL ACR ++ L +R+ YLV YVLL+NMYAA GKW G++R M+
Sbjct: 434 ASLLGACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRAS 493
Query: 448 GIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
G+QK+PG S++E+G + EF+AGDRSH S IY+ LE ++ + G+VP T
Sbjct: 494 GVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARARGHVPHT 546
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 160/402 (39%), Positives = 254/402 (63%), Gaps = 1/402 (0%)
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
+ +G IH GL +++ V TAL+ MY+ G + A +FD + + WNAM+
Sbjct: 155 IHVGRQIHCQAIGTGL-VSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVA 213
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GY + GD+++A +F+ MP R+ ISWTA++ G+ + EA+ FR MQ+ VEPD +
Sbjct: 214 GYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIA 273
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+++ L+ACA++G L +G WIH Y+ K V + N LID+Y++CG IE A +VF+ M
Sbjct: 274 MLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNME 333
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+++++W S+I G A++G EALE F+ M++ KP+ ++F L+AC H GL+E G
Sbjct: 334 HKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRW 393
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF M Y + P+I+HYGC++DL RAG L++A +V MP + N + GSLLAA R
Sbjct: 394 YFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIH 453
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
GD L ++ +++L+ ++P NY LL+N+YA KW+ AG +R+ M+ G++K PG S
Sbjct: 454 GDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSC 513
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
IE+ + +HEF+AGD+ H +SE I+ +L J+ K+ YV +
Sbjct: 514 IEVNNRVHEFVAGDKLHPQSERIFEVLCKJNLQSKIAMYVQK 555
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
EA+ + + S + D ++ VL A + + +G IH + ++ V LI
Sbjct: 122 EAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALI 181
Query: 258 DLYSRCGCIEFARQ-------------------------------VFQRMHKRTLVSWNS 286
+YS CGC+ ARQ +F+RM +R ++SW +
Sbjct: 182 QMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTA 241
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I G+A EA+ F MQ E +PD ++ AL+AC+H G +E G + + K +
Sbjct: 242 VIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDK-H 300
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+S + ++D+Y++ G++E AL V +NM K
Sbjct: 301 GLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHK 335
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 177/454 (38%), Positives = 264/454 (58%), Gaps = 2/454 (0%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WT +++ +G +EA + F RM G P+ +TF +L+ A + + G IH
Sbjct: 131 WTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRY 190
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
GL NV+VGTA++ MY K GR+D A F+ ++ K+S TWNAM+ Y G
Sbjct: 191 ARISGL-LPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDRE 249
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTIISVLNACA 226
A+ +F EM D++ W A++ + + G ++AL+ +R M + + P T ++V++ CA
Sbjct: 250 ALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCA 309
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ L G IH V +F N+ V N L+ +Y +CGC++ A VF M + +SWN+
Sbjct: 310 ELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNT 369
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
II +A +G +AL + M +G KP V+F G L+ACSH GL+ DGL YF M+ +
Sbjct: 370 IISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDH 429
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
R+ P + H+GCI+DL R GRL +A V+++MP++ N V SLL AC+T GD+ R
Sbjct: 430 RIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRA 489
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHE 466
+VD P YVLL+N+YAA G+W KIR+ M RG++K PG S IEIG +HE
Sbjct: 490 ADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHE 549
Query: 467 FMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F++GD SH + E IY L + ++K GYVP+T
Sbjct: 550 FVSGDSSHPQGEEIYVELGKMVEEMKGLGYVPDT 583
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 6/217 (2%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+ F N +I+ Y + G + A +F+ MP R+ +WT + F G EAL FR M
Sbjct: 95 QPPFLANLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRM 154
Query: 207 QISGVEPDYVTIISVLNACANVGTLGI--GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
SG PD VT +L A A +G I G IHRY NV V +I +Y +CG
Sbjct: 155 YQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCG 214
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
++ AR F+ + + V+WN+++ + ++G EALE F M D V + +
Sbjct: 215 RLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMH----DADSVCWNAMIA 270
Query: 325 ACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
A + G + L + M ++P+ + ++D+
Sbjct: 271 AYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDV 307
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 10/260 (3%)
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
N F +R ++++ ++ E D V +++ C + +H ++L
Sbjct: 36 NSFGERESLHKSIQLLESREL---ELDPVGYAALIRRCGAANAISAARRLHSHILSLPHS 92
Query: 248 DNVK--VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
++ + N LI++Y +CG + +AR++F+ M R + +W + F+ NG EAL +F
Sbjct: 93 NSQPPFLANLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFR 152
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIE-DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
M + G +PD V+F+ L A + G D R +I + P + ++ +Y +
Sbjct: 153 RMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGK 212
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLL 424
GRL+DA E + K N V +++ + G A L + + D D V N ++
Sbjct: 213 CGRLDDARAAFEELQWK-NSVTWNAMMTNYKLDGRDREALELFREMHDAD-SVCWNAMIA 270
Query: 425 ANMYAAVGKWDGAGKIRRTM 444
A YA G+ A + R+M
Sbjct: 271 A--YAQHGRGKQALDLYRSM 288
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 32/184 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W + IS + G +A L + M L G P +TF+ LLS C+ H
Sbjct: 365 ISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACS-------------H 411
Query: 106 GLVCKLGLD-----------RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS-SFTWN 153
G + GLD + +V ++D+ + GR+ A +V +M +++ + W
Sbjct: 412 GGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWM 471
Query: 154 AMIDGYMRRGDIESAVRMFDEMPVRDAISWTA-----LLNGFVKRGYFEEALECFREMQI 208
+++ GD++ VR D+ V D + WT+ L N + G +++ + + M
Sbjct: 472 SLLGACKTHGDLKRGVRAADQ--VVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAA 529
Query: 209 SGVE 212
GV+
Sbjct: 530 RGVK 533
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 177/459 (38%), Positives = 276/459 (60%), Gaps = 6/459 (1%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
NP + WT+ I + G ++E+ +TRM G P TF L C + + LG
Sbjct: 106 NPFL-WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACG--AALNMDLGK 162
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H +G +++ VG +++D+Y K G + A VFD M + +W +I Y +
Sbjct: 163 QVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKY 222
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD+ESA +FD++P +D ++WTA++ G+ + G +EALE F++MQ G+E D VT+ V+
Sbjct: 223 GDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVI 282
Query: 223 NACANVGTLGIGLWIHRYVLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+ACA +G + WI + F NV V + LID+YS+CG + A +VF+ M +R
Sbjct: 283 SACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERN 342
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+ S++S+I+G+A++G AL+ F+ M K +P+ V+F G L+ACSHAGL+E G + F
Sbjct: 343 VFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFA 402
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M+K + V+P +HY C+VDL RAG LE+AL++V+ MPM+PN V G+LL ACR G+
Sbjct: 403 KMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNP 462
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+A+ L L+P NY+LL+N+YA+ G+W+ K+R+ ++ +G +K PG S E
Sbjct: 463 DIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEG 522
Query: 461 GSG-IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+G IH+F AGD +H S I L+ L L+ GY P
Sbjct: 523 KNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKP 561
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 162/415 (39%), Gaps = 109/415 (26%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAK----FGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+H + + GL + + ++ T L+ M K G L +VF + + F W AMI GY
Sbjct: 61 VHAHIIRNGLSQCSYVL-TKLIRMLTKVDVPMGSYPL--LVFGQVNYPNPFLWTAMIRGY 117
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+G E+ + M+ GV P T
Sbjct: 118 -------------------------------ALQGLLSESTNFYTRMRRDGVGPVSFTFS 146
Query: 220 SVLNACANVGTLGIGLWIH-RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
++ AC + +G +H + +L F ++ V N++IDLY +CG + AR+VF M +
Sbjct: 147 ALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSE 206
Query: 279 RTLVSWNSIIV-------------------------------GFAVNGFVGEALEYFNSM 307
R +VSW +IV G+A NG EALEYF M
Sbjct: 207 RDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKM 266
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI-YRVSPRIEHYGCIVDLYSRAG 366
Q G + D V+ G ++AC+ G ++ DI ++ + S + ++D+YS+ G
Sbjct: 267 QDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCG 326
Query: 367 RLEDALNVVENMP----------------------------------MKPNEVVLGSLLA 392
++A V E M ++PN+V +L+
Sbjct: 327 SPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILS 386
Query: 393 ACRTKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
AC G + +L M+ + P D +Y + ++ G + A + +TM
Sbjct: 387 ACSHAGLVEQGRQLFAKMEKFFGVAPSPD-HYACMVDLLGRAGCLEEALDLVKTM 440
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 84/199 (42%), Gaps = 6/199 (3%)
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI--EFARQVFQR 275
++S+L+ C + +H ++++ V LI + ++ + VF +
Sbjct: 45 LMSILHDCTLFSQIK---QVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQ 101
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
++ W ++I G+A+ G + E+ ++ M+++G P +F+ AC A ++ G
Sbjct: 102 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 161
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
+ I + + ++DLY + G L A V + M + + V L+ A
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSER-DVVSWTELIVAYA 220
Query: 396 TKGDIILAERLMKYLVDLD 414
GD+ A L L D
Sbjct: 221 KYGDMESASGLFDDLPSKD 239
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 175/470 (37%), Positives = 274/470 (58%), Gaps = 38/470 (8%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
+A L + M + PN T+ +L C+D + + G +H + K GL + ++ +
Sbjct: 120 KAILLYYEMMVAHFRPNKYTYPAVLKACSD--AGVVAEGVQVHAHLVKHGLGGDGHILSS 177
Query: 123 A-------------------------------LLDMYAKFGRMDLATVVFDAMRVKSSF- 150
A ++D Y +FG ++ A +F+ M +S
Sbjct: 178 AIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMIS 237
Query: 151 TWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG 210
TWNAMI G+ R G +E A FDEM RD ISW+A+++G+++ G F EALE F +MQ
Sbjct: 238 TWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEK 297
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
+ P + SVL+ACAN+G L G WIH Y + + + + +L+D+Y++CG I+ A
Sbjct: 298 IRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAW 357
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
+VF++M + + SWN++I G A++G +A++ F+ M P+ ++F G L AC+H G
Sbjct: 358 EVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGG 414
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
L++ GL F+ M+K Y V P+IEHYGCIVDL RAG L +A VV ++P +P V G+L
Sbjct: 415 LVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGAL 474
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
L ACR G++ L ER+ K L++L+P Y LL+N+YA G+W+ G++R+ MK RGI+
Sbjct: 475 LGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIK 534
Query: 451 KKPGLSSIEIGSG-IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
PG S I++G G +H+F+ GD SH + + IY ML+ + L++ GY P+
Sbjct: 535 TTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPD 584
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 146/367 (39%), Gaps = 79/367 (21%)
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYA-----KFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
H L+ + G +++ + G+ L+ YA ++ + + VFD +R + F WN MI
Sbjct: 54 HALILRTGHLQDSYIAGS-LVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVC 112
Query: 160 MRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
+ + A+ ++ EM V + ++ A+L G E ++ + G+ D
Sbjct: 113 IENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDG 172
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC---------------------- 253
+ S + A+ G L R +L + VC
Sbjct: 173 HILSSAIRMYASFGRLVEA----RRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFE 228
Query: 254 -----------NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
N +I +SRCG +E AR+ F M +R +SW+++I G+ G EALE
Sbjct: 229 GMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALE 288
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F+ MQKE +P L+AC++ G ++ G R+ K + +VD+Y
Sbjct: 289 IFHQMQKEKIRPRKFVLPSVLSACANLGALDQG-RWIHTYAKRNSIQLDGVLGTSLVDMY 347
Query: 363 SRAGRL-------------------------------EDALNVVENMPMKPNEVVLGSLL 391
++ GR+ EDA+++ M + PNE+ +L
Sbjct: 348 AKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDINPNEITFVGVL 407
Query: 392 AACRTKG 398
AC G
Sbjct: 408 NACAHGG 414
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 147/317 (46%), Gaps = 24/317 (7%)
Query: 146 VKSSFTWNAMIDGYM-----RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEAL 200
++ S+ +++ Y R ES++R+FD + + W ++ ++ +A+
Sbjct: 63 LQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAI 122
Query: 201 ECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLY 260
+ EM ++ P+ T +VL AC++ G + G+ +H +++K + + ++ I +Y
Sbjct: 123 LLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMY 182
Query: 261 SRCGCIEFARQVF-QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
+ G + AR++ + + V WN++I G+ G V A E F M ++
Sbjct: 183 ASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMIS---TW 239
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM- 378
++ S G++E +FD MK+ +S + ++D Y + G +AL + M
Sbjct: 240 NAMISGFSRCGMVEVAREFFDEMKERDEIS-----WSAMIDGYIQEGCFMEALEIFHQMQ 294
Query: 379 --PMKPNEVVLGSLLAACRTKGDIILAERLMKYL----VDLDPGVDSNYVLLANMYAAVG 432
++P + VL S+L+AC G + + Y + LD + ++ L +MYA G
Sbjct: 295 KEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTS---LVDMYAKCG 351
Query: 433 KWDGAGKIRRTMKGRGI 449
+ D A ++ M + +
Sbjct: 352 RIDLAWEVFEKMSNKEV 368
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 92/186 (49%), Gaps = 16/186 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W++ I + + G EA F +M P ++LS CA+ LGA+
Sbjct: 268 ISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN-------LGALDQ 320
Query: 106 GLVCKLGLDRNNV----MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
G RN++ ++GT+L+DMYAK GR+DLA VF+ M K +WNAMI G
Sbjct: 321 GRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAM 380
Query: 162 RGDIESAVRMFDEMPVR-DAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPD---YV 216
G E A+ +F +M + + I++ +LN G ++ L F M+ GVEP Y
Sbjct: 381 HGRAEDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYG 440
Query: 217 TIISVL 222
I+ +L
Sbjct: 441 CIVDLL 446
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 175/427 (40%), Positives = 259/427 (60%), Gaps = 5/427 (1%)
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
G PN TF+ + C + + G I K+GL+ +N+ V A++ MYA +G +
Sbjct: 27 GFLPNRYTFVFVFKACGN--GLGVLEGEQIRVHAIKIGLE-SNLFVTNAMIRMYANWGLV 83
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
D A VFD + ++WN MI GY+ G+I A MFDEM RD +SWT ++ G+V+ G
Sbjct: 84 DEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVG 143
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
F+EAL+ F EM +G P+ T+ S L ACAN+ L G WIH Y+ K + K N ++
Sbjct: 144 CFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLA 203
Query: 255 TLIDLYSRCGCIEFARQVFQRMH--KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
+L+D+Y++CG I+FA +VF + K + WN++I G+A++G EA++ F M+ E
Sbjct: 204 SLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKV 263
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
P+ V+F L ACSH L+E+G YF M Y + P IEHYGC+VDL R+G L++A
Sbjct: 264 SPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAE 323
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
V NMPM P+ + G+LL ACR DI +R+ K + +LD +VLLAN+Y+A G
Sbjct: 324 ETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASG 383
Query: 433 KWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+WD A +R+ ++ G +K PG SSIE+ H+F+ GDRSH +++ +Y L+ ++ LK
Sbjct: 384 QWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLK 443
Query: 493 LCGYVPE 499
GYVPE
Sbjct: 444 NAGYVPE 450
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ I+ + + G EA F M G PN T + L+ CA+ + L G I
Sbjct: 129 VVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVA--LDQGRWI 186
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVF-DAMRVK-SSFTWNAMIDGYMRR 162
H + K + N ++ + LLDMYAK G +D A VF D +K + WNAMI GY
Sbjct: 187 HVYIDKSEIKMNERLLAS-LLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMH 245
Query: 163 GDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPD 214
G + A+ +F++M V + +++ ALLN EE F+ M S G+EP+
Sbjct: 246 GKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPE 302
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 105/263 (39%), Gaps = 66/263 (25%)
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
+++SG P+ T + V AC N + G I + +K + N+ V N +I +Y+ G
Sbjct: 23 VRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGL 82
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
++ AR+VF + L SWN +I G+ +G +G A E F+ M + D VS+T +
Sbjct: 83 VDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSER----DVVSWTTIIAG 138
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
G ++ L D+ ++ + P PNE
Sbjct: 139 YVQVGCFKEAL---DLFHEMLQTGP------------------------------PPNEF 165
Query: 386 VLGSLLAACRT---------------KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
L S LAAC K +I + ERL+ L+D MYA
Sbjct: 166 TLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLD--------------MYAK 211
Query: 431 VGKWDGAGKIRRTMKGRGIQKKP 453
G+ D A K+ G ++ P
Sbjct: 212 CGEIDFAAKVFHDEYGLKLKVWP 234
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 69/178 (38%), Gaps = 28/178 (15%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I + G+ EA F +M + +PN +TF+ LL+ C+ HG
Sbjct: 235 WNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACS-------------HGK 281
Query: 108 VCKLGLDRNNVMVGT-----------ALLDMYAKFGRMDLA-TVVFDAMRVKSSFTWNAM 155
+ + G M + ++D+ + G + A VF+ + W A+
Sbjct: 282 LVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGAL 341
Query: 156 IDGYMRRGDIESAVR---MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG 210
+ DIE R + E+ L N + G ++EA +++++SG
Sbjct: 342 LGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSG 399
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 172/452 (38%), Positives = 273/452 (60%), Gaps = 8/452 (1%)
Query: 43 NPTVQ-WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP V +T+ I SGR A+ + RM + P++ ++L C L +
Sbjct: 89 NPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD------LKVC 142
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IH V KLG + VG ++++Y K G + A +FD M + MI+ Y
Sbjct: 143 REIHAQVLKLGFGSSR-SVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSE 201
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G I+ A+ +F ++ ++D + WTA+++G V+ +ALE FREMQ+ V + T + V
Sbjct: 202 CGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCV 261
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+AC+++G L +G W+H +V Q + + V N LI++YSRCG I AR+VF+ M + +
Sbjct: 262 LSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDV 321
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+S+N++I G A++G EA+ F M GF+P+ V+ L ACSH GL++ GL F+
Sbjct: 322 ISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS 381
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
MK+++ V P+IEHYGCIVDL R GRLE+A +EN+P++P+ ++LG+LL+AC+ G++
Sbjct: 382 MKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNME 441
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
L E++ K L + + YVLL+N+YA+ GKW + +IR +M+ GI+K+PG S+IE+
Sbjct: 442 LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVD 501
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493
+ IHEF+ GD +H E IY L+ L+ L+
Sbjct: 502 NQIHEFLVGDIAHPHKEAIYQRLQELNRILRF 533
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 148/370 (40%), Gaps = 88/370 (23%)
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A VVF+ +RV S+ ++ A +F + + +TA+++GFV G
Sbjct: 61 AFVVFELIRVCSTLD------------SVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRS 108
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF---------- 246
+ + + M + V PD I SVL AC L + IH VLK F
Sbjct: 109 ADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKM 164
Query: 247 ----------------------KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
+D+V +I+ YS CG I+ A ++FQ + + V W
Sbjct: 165 MEIYGKSGELVNAKKMFDEMPDRDHV-AATVMINCYSECGFIKEALELFQDVKIKDTVCW 223
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G N + +ALE F MQ E + + L+ACS G +E G R+ +
Sbjct: 224 TAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELG-RWVHSFVE 282
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE---------------------------- 376
R+ ++++YSR G + +A V
Sbjct: 283 NQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAIN 342
Query: 377 ------NMPMKPNEVVLGSLLAACRTKGDIILAERL---MKYLVDLDPGVDSNYVLLANM 427
N +PN+V L +LL AC G + + + MK + +++P ++ +Y + ++
Sbjct: 343 EFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIE-HYGCIVDL 401
Query: 428 YAAVGKWDGA 437
VG+ + A
Sbjct: 402 LGRVGRLEEA 411
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 116/295 (39%), Gaps = 66/295 (22%)
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T+ISVL +C N+ + IH +++ + V LI + S +++A VF +
Sbjct: 31 TLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-------HA 329
+ + ++I GF +G + + ++ M PD T L AC HA
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHA 147
Query: 330 GLIE--------DGLRYFDI---------MKKIYRVSPRIEHYGC--IVDLYSRAGRLED 370
+++ GL+ +I KK++ P +H +++ YS G +++
Sbjct: 148 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 207
Query: 371 ALNVVENMPMK----------------------------------PNEVVLGSLLAACRT 396
AL + +++ +K NE +L+AC
Sbjct: 208 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 267
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYV--LLANMYAAVGKWDGAGKIRRTMKGRGI 449
G + L R + V+ SN+V L NMY+ G + A ++ R M+ + +
Sbjct: 268 LGALELG-RWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDV 321
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 160/402 (39%), Positives = 254/402 (63%), Gaps = 1/402 (0%)
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
+ +G IH GL +++ V TAL+ MY+ G + A +FD + + WNAM+
Sbjct: 155 IHVGRQIHCQAIGTGL-VSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVA 213
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GY + GD+++A +F+ MP R+ ISWTA++ G+ + EA+ FR MQ+ VEPD +
Sbjct: 214 GYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIA 273
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+++ L+ACA++G L +G WIH Y+ K V + N LID+Y++CG IE A +VF+ M
Sbjct: 274 MLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNME 333
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+++++W S+I G A++G EALE F+ M++ KP+ ++F L+AC H GL+E G
Sbjct: 334 HKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRW 393
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF M Y + P+I+HYGC++DL RAG L++A +V MP + N + GSLLAA R
Sbjct: 394 YFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIH 453
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
GD L ++ +++L+ ++P NY LL+N+YA KW+ AG +R+ M+ G++K PG S
Sbjct: 454 GDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSC 513
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
IE+ + +HEF+AGD+ H +SE I+ +L ++ K+ YV +
Sbjct: 514 IEVNNRVHEFVAGDKLHPQSERIFEVLCKINLQSKIAMYVQK 555
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
EA+ + + S + D ++ VL A + + +G IH + ++ V LI
Sbjct: 122 EAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALI 181
Query: 258 DLYSRCGCIEFARQ-------------------------------VFQRMHKRTLVSWNS 286
+YS CGC+ ARQ +F+RM +R ++SW +
Sbjct: 182 QMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTA 241
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I G+A EA+ F MQ E +PD ++ AL+AC+H G +E G + + K +
Sbjct: 242 VIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDK-H 300
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+S + ++D+Y++ G++E AL V +NM K
Sbjct: 301 GLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHK 335
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 165/458 (36%), Positives = 271/458 (59%), Gaps = 5/458 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + IS + +SG AEA F RM P+ TF +LLS CA+ + G +H
Sbjct: 262 VVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACAN--AGFFLHGKSVH 319
Query: 106 GLVCKLGLD---RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
G +L D + V AL+ +Y+K G++ +AT +FD+M +K +WN ++ GY+
Sbjct: 320 GQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIES 379
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G +++A R+F EMP + +SW +++G+V G E+AL+ F +M+ V+P T +
Sbjct: 380 GCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAV 439
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC +G L G +H ++++ F+ + N L+ +Y+RCG ++ AR VF M V
Sbjct: 440 AACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSV 499
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN++I +G EALE F+ M +G PD +SF LTAC+HAGL++DG +YF+ M
Sbjct: 500 SWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESM 559
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
++ + +SP +HY ++DL RAGR+ +A ++++ MP +P + ++L+ CR GD+ L
Sbjct: 560 ERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMEL 619
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
L + P D Y+LL+N Y+A G+W A ++R+ M+ RG++K+PG S IE+G+
Sbjct: 620 GAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGN 679
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F+ GD H ++ +Y LE++ ++ GYVP+T
Sbjct: 680 KVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDT 717
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 176/376 (46%), Gaps = 44/376 (11%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTN--PNHITFITLLSGCADFPSQCLFLGA 102
TV + IS R+ A A F + + P+ +F +LLS +
Sbjct: 122 TVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCT 181
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKF---GRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+H V KLG + V AL+ +Y K G A V D M K TW ++ G+
Sbjct: 182 QLHCAVHKLGAG-AVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGH 240
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+R+GD+ +A F+E+ + W A+++G+V+ G EA E FR M + PD T
Sbjct: 241 VRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFT 300
Query: 220 SVLNACANVGTLGIGLWIH-RYV-LKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
S+L+ACAN G G +H +++ L+ DF + + V N L+ LYS+ G I A ++F
Sbjct: 301 SLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDS 360
Query: 276 MHKRTLVSWNSIIVGF--------------------------AVNGFVG-----EALEYF 304
M + +VSWN+I+ G+ V+G+V +AL+ F
Sbjct: 361 MTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLF 420
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYS 363
N M+ E KP ++ GA+ AC G ++ G + + +++ + S + ++ +Y+
Sbjct: 421 NQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGN--ALLTMYA 478
Query: 364 RAGRLEDALNVVENMP 379
R G ++DA V MP
Sbjct: 479 RCGAVKDARLVFLVMP 494
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 156/360 (43%), Gaps = 48/360 (13%)
Query: 119 MVGTALLDMYAKFGRMDLATVVFDAMRV--KSSFTWNAMIDGYMRRGDIESAVRMF---- 172
+ T+L+ YA GR+ + FD++ V + + NAMI + R AV +F
Sbjct: 90 VAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLL 149
Query: 173 --DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
D+ D S+T+LL+ + + A+ ++ + + ++SV NA
Sbjct: 150 ASDDSLRPDDYSFTSLLSAVGQ--MHDLAVSHCTQLHCAVHKLGAGAVLSVSNAL----- 202
Query: 231 LGIGLWIH----------RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
I L++ R VL + + + T++ + R G + AR F+ +
Sbjct: 203 --IALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEF 260
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
V WN++I G+ +G EA E F M + PD +FT L+AC++AG G
Sbjct: 261 DVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGK---S 317
Query: 341 IMKKIYRVSP------RIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSL 390
+ + R+ P + +V LYS++G++ A + ++M +K N ++ G +
Sbjct: 318 VHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYI 377
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
+ C I E M Y +L +++++ + Y G + A K+ M+ ++
Sbjct: 378 ESGCLDNAARIFKE--MPYKSEL------SWMVMVSGYVHGGLAEDALKLFNQMRSEDVK 429
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W + IS + G EA F +M G P+ I+F+T+L+ C G +
Sbjct: 498 SVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNH-------AGLVD 550
Query: 105 HGLVCKLGLDRN-NVMVG----TALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDG 158
G ++R+ + G L+D+ + GR+ A + M + + W A++ G
Sbjct: 551 DGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSG 610
Query: 159 YMRRGDIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
GD+E +A ++F +P D ++ L N + G + +A + M+ GV+ +
Sbjct: 611 CRINGDMELGAYAADQLFKMVPEHDG-TYILLSNTYSAAGRWVDAARVRKLMRDRGVKKE 669
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 268/456 (58%), Gaps = 3/456 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W I +C++G +A F M P+ + T+LS C + L G I
Sbjct: 187 AVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGN--LSYGRTI 244
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V G ++ + TAL++MYA G MDLA ++D + K AM+ GY + G
Sbjct: 245 HEFVKDNGYAIDS-HLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGM 303
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ A +FD+M RD + W+A+++G+ + +EAL+ F EM PD +T++SV++A
Sbjct: 304 VKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISA 363
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C++VG L WIH YV + F + V N LID+Y++CG + AR+VF+ M ++ ++SW
Sbjct: 364 CSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISW 423
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+S+I FA++G A++ F M++ +P+GV+F G L AC HAGL+E+G + F M
Sbjct: 424 SSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMIN 483
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ +SP EHYGC+VDLY RA L A+ ++E MP PN ++ GSL++AC+ G+ L E
Sbjct: 484 EHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGE 543
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
K L++L+P D V+L+N+YA +W+ G IR++M +GI K+ S IEI + +
Sbjct: 544 FAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQV 603
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
H FM DR H +S+ IY L+ + LKL GY P T
Sbjct: 604 HMFMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPST 639
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 179/409 (43%), Gaps = 73/409 (17%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNP---NHITFITLLSGCADFPSQCLF 99
NP +++ + RH E + F L N + +F +LL + +
Sbjct: 82 NPHTHFSNQLLRHLSRSSFPEKTI-FLYHNLRAINAFALDRFSFPSLLKAVSKVSA--FN 138
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
G IHGL KLG ++ + T L+ MYA R
Sbjct: 139 HGLEIHGLASKLGF-VDDPFIQTGLIAMYASCRR-------------------------- 171
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
I A +FD+M DA++W +++G+ + G++++AL F +M+ S ++PD V +
Sbjct: 172 -----IMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILC 226
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ-------- 271
+VL+AC + G L G IH +V + + + LI++Y+ CG ++ AR+
Sbjct: 227 TVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSK 286
Query: 272 -----------------------VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
+F +M +R LV W+++I G+A + EAL+ F+ M
Sbjct: 287 HLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEML 346
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
++ PD ++ ++ACSH G + + + ++D+Y++ G L
Sbjct: 347 QKRSVPDQITMLSVISACSHVGALAQA-NWIHTYVDRSGFGRALSVNNALIDMYAKCGNL 405
Query: 369 EDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL--VDLDP 415
A V ENMP K N + S++ A G+ A +L + + V+++P
Sbjct: 406 VKAREVFENMPRK-NVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEP 453
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 4/213 (1%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTIISVLNACANVG 229
+F ++P LL + + E+ + + ++ I+ D + S+L A + V
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 230 TLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIV 289
GL IH K F D+ + LI +Y+ C I AR +F +M V+WN II
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195
Query: 290 GFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI-YRV 348
G+ NG +AL F M+ KPD V L+AC HAG + G + +K Y +
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
++ ++++Y+ G ++ A + + + K
Sbjct: 256 DSHLQ--TALINMYANCGAMDLARKIYDGLSSK 286
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 168/459 (36%), Positives = 270/459 (58%), Gaps = 11/459 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I R+CR G + EA F M P+ + ++S C G M
Sbjct: 177 VVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR-------TGNMR 229
Query: 105 HGLVCKLGLDRNNVMVGT----ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
+ L N+V + T AL+ MYA G MD+A F M V++ F AM+ GY
Sbjct: 230 YNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYS 289
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G ++ A +FD+ +D + WT +++ +V+ Y +EAL F EM SG++PD V++ S
Sbjct: 290 KCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFS 349
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
V++ACAN+G L W+H + + + + N LI++Y++CG ++ R VF++M +R
Sbjct: 350 VISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRN 409
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+VSW+S+I +++G +AL F M++E +P+ V+F G L CSH+GL+E+G + F
Sbjct: 410 VVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA 469
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M Y ++P++EHYGC+VDL+ RA L +AL V+E+MP+ N V+ GSL++ACR G++
Sbjct: 470 SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGEL 529
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L + K +++L+P D VL++N+YA +W+ IRR M+ + + K+ GLS I+
Sbjct: 530 ELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQ 589
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
HEF+ GD+ H +S IY+ L+ + LKL GYVP+
Sbjct: 590 NGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPD 628
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 162/374 (43%), Gaps = 67/374 (17%)
Query: 57 RSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRN 116
RS L + R+ G + +F+ +L + + LF G +HG+ K+
Sbjct: 88 RSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSA--LFEGMELHGVAFKIA-TLC 144
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
+ V T +DMYA GR++ A VFD M + TWN MI+ Y R G ++ A ++F+
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFE--- 201
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
EM+ S V PD + + ++++AC G +
Sbjct: 202 ----------------------------EMKDSNVMPDEMILCNIVSACGRTGNMRYNRA 233
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-------------------- 276
I+ ++++ D + + + L+ +Y+ GC++ AR+ F++M
Sbjct: 234 IYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGR 293
Query: 277 -----------HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
K+ LV W ++I + + + EAL F M G KPD VS ++A
Sbjct: 294 LDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISA 353
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
C++ G++ D ++ + + + ++++Y++ G L+ +V E MP + N V
Sbjct: 354 CANLGIL-DKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR-NVV 411
Query: 386 VLGSLLAACRTKGD 399
S++ A G+
Sbjct: 412 SWSSMINALSMHGE 425
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 173/460 (37%), Positives = 276/460 (60%), Gaps = 11/460 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTR-MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I R+ + ALE R M P+ + +++++ AD + + +G +
Sbjct: 191 VSWSTMIRSLSRNKEF-DMALELIREMNFMQVRPSEVAMVSMVNLFADTAN--MRMGKAM 247
Query: 105 HGLVCKLGLDRNNVMVG----TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
H V + + NN +G TALLDMYAK G + LA +F+ + K+ +W AMI G +
Sbjct: 248 HAYVIR---NSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 304
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R +E A +FD RD + WTA+L+ + + ++A F +M+ SGV P VTI+S
Sbjct: 305 RSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVS 364
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+L+ CA G L +G W+H Y+ K+ + + + L+D+Y++CG I A ++F R
Sbjct: 365 LLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRD 424
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+ WN+II GFA++G+ EAL+ F M+++G KP+ ++F G L ACSHAGL+ +G + F+
Sbjct: 425 ICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFE 484
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + + P+IEHYGC+VDL RAG L++A ++++MP+KPN +V G+L+AACR +
Sbjct: 485 KMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNP 544
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E L++++P VL++N+YAA +W A +R+TMK G++K+PG S IE+
Sbjct: 545 QLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEV 604
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+HEF+ GD+SH + I ML + L GYVP+T
Sbjct: 605 NGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDT 644
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 206/484 (42%), Gaps = 106/484 (21%)
Query: 31 ISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC 90
+ I N+ S ++P+ QW I+ + + + A + ++ ++ ++L C
Sbjct: 75 LQIPLNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKAC 134
Query: 91 ADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF 150
LG IHG V K GLDR+ V VG AL+ MY + ++ A +VF
Sbjct: 135 GQV--SWTQLGKEIHGFVLKKGLDRD-VFVGNALMLMYGECACVEYARLVF--------- 182
Query: 151 TWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG 210
D+M RD +SW+ ++ + F+ ALE REM
Sbjct: 183 ----------------------DKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQ 220
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT--LIDLYSRCGCIEF 268
V P V ++S++N A+ + +G +H YV++ +++ V T L+D+Y++CG +
Sbjct: 221 VRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGL 280
Query: 269 ARQVFQRMHKRTLVSWNSIIVG-------------------------------FAVNGFV 297
ARQ+F + ++T+VSW ++I G +A +
Sbjct: 281 ARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCI 340
Query: 298 GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC 357
+A F+ M+ G +P V+ L+ C+ AG ++ G + K RV
Sbjct: 341 DQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDK-ERVEVDCILNTA 399
Query: 358 IVDLYSR------AGRL-------------------------EDALNV---VENMPMKPN 383
+VD+Y++ AGRL E+AL++ +E +KPN
Sbjct: 400 LVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPN 459
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLVD---LDPGVDSNYVLLANMYAAVGKWDGAGKI 440
++ LL AC G + ++L + +V L P ++ +Y + ++ G D A ++
Sbjct: 460 DITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIE-HYGCMVDLLGRAGLLDEAHEM 518
Query: 441 RRTM 444
++M
Sbjct: 519 IKSM 522
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/469 (37%), Positives = 270/469 (57%), Gaps = 41/469 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I+ + +SGR EA FTRM +PN T +++LS C S L LG I
Sbjct: 225 VSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRS--LELGKWIG 282
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V G +N +V NA++D Y + G+I
Sbjct: 283 SWVRDRGFGKNLQLV--------------------------------NALVDMYSKCGEI 310
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+A ++FD M +D I W ++ G+ +EEAL F M V P+ VT ++VL AC
Sbjct: 311 GTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPAC 370
Query: 226 ANVGTLGIGLWIHRYVLKQDFK-----DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
A++G L +G W+H Y+ K + K +NV + ++I +Y++CGC+E A QVF+ M R+
Sbjct: 371 ASLGALDLGKWVHAYIDK-NLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRS 429
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
L SWN++I G A+NG AL F M EGF+PD ++F G L+AC+ AG +E G RYF
Sbjct: 430 LASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFS 489
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M K Y +SP+++HYGC++DL +R+G+ ++A ++ NM M+P+ + GSLL ACR G +
Sbjct: 490 SMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQV 549
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
E + + L +L+P YVLL+N+YA G+WD KIR + +G++K PG +SIEI
Sbjct: 550 EFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEI 609
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
+HEF+ GD+ H +SE+I+ ML+ + L+ G+VP+T + LY+ D
Sbjct: 610 DGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDT-SEVLYDMD 657
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 217/438 (49%), Gaps = 44/438 (10%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I H + + F++M G PN TF +L CA S+ +H
Sbjct: 95 WNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAK--SKATHEAKQLHAH 152
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
KL L + V T+L+ MY++ G + A +VFD ++ + ++ A+I GY+ G ++
Sbjct: 153 ALKLALHLHP-HVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDD 211
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A R+FDE+P +D +SW A++ G+V+ G FEEAL CF MQ + V P+ T++SVL+AC +
Sbjct: 212 ARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGH 271
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ +L +G WI +V + F N+++ N L+D+YS+CG I AR++F M + ++ WN++
Sbjct: 272 LRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTM 331
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL---RYFD---- 340
I G+ EAL F M +E P+ V+F L AC+ G ++ G Y D
Sbjct: 332 IGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLK 391
Query: 341 -------------------------IMKKIYRV--SPRIEHYGCIVDLYSRAGRLEDALN 373
+ ++++R S + + ++ + G E AL
Sbjct: 392 GTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALG 451
Query: 374 VVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD---SNYVLLANM 427
+ E M +P+++ +L+AC G + L R + + D G+ +Y + ++
Sbjct: 452 LFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSM-NKDYGISPKLQHYGCMIDL 510
Query: 428 YAAVGKWDGAGKIRRTMK 445
A GK+D A + M+
Sbjct: 511 LARSGKFDEAKVLMGNME 528
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/477 (36%), Positives = 277/477 (58%), Gaps = 5/477 (1%)
Query: 26 TTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFI 84
+TT + + NP + +++ R C + E + + L G P++IT
Sbjct: 62 STTNLLHYAIRVASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHP 121
Query: 85 TLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM 144
L+ CA + + G HG K G +++ V +L+ MYA G ++ A VF M
Sbjct: 122 FLVKACAQLENAPM--GMQTHGQAIKHGFEQD-FYVQNSLVHMYASVGDINAARSVFQRM 178
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFR 204
+W MI GY R GD +SA +FD MP R+ ++W+ +++G+ + FE+A+E F
Sbjct: 179 CRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFE 238
Query: 205 EMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
+Q GV + ++ V+++CA++G L +G H YV++ N+ + ++D+Y+RCG
Sbjct: 239 ALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCG 298
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
+E A VF+++ ++ ++ W ++I G A++G+ +AL YF+ M K+GF P ++FT LT
Sbjct: 299 NVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLT 358
Query: 325 ACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNE 384
ACSHAG++E GL F+ MK+ + V PR+EHYGC+VDL RAG+L A V MP+KPN
Sbjct: 359 ACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNA 418
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
+ +LL ACR ++ + ER+ K L+++ P +YVLL+N+YA KW +R+ M
Sbjct: 419 PIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMM 478
Query: 445 KGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE-LLSFDLKLCGYVPET 500
K +G++K PG S IEI +HEF GD++H E E I + E ++ +KL GYV T
Sbjct: 479 KDKGVRKPPGYSLIEIDGKVHEFTIGDKTHPEIEKIERIWEDIILPKIKLAGYVGNT 535
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 186/485 (38%), Positives = 282/485 (58%), Gaps = 20/485 (4%)
Query: 24 NLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITF 83
NL ++ + N +TV W I H +S + + RM PN T+
Sbjct: 65 NLLNAHKVFERIENPSTTV-----WNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTY 119
Query: 84 ITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMD---LATVV 140
L+ GCA S+ L G +HG V G NV V T+L+++YA G D A V
Sbjct: 120 SFLIGGCAR--SRLLREGEQVHGRVVANGYC-TNVFVRTSLVNLYAIAGGYDGVRKARRV 176
Query: 141 FDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEAL 200
FD + ++ +WN+++ GY+R GD++ A R+FDEMP R+ +SWT ++ G + G ++AL
Sbjct: 177 FDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQAL 236
Query: 201 ECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN----VKVCNTL 256
F EM+ +GV+ D V +++ L+ACA +G L +G WIH Y+ ++ N V + N+L
Sbjct: 237 HLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSL 296
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF---K 313
I +Y+ CG I+ A +VF M +R+ +SW S+I GFA G EAL F MQ+ G +
Sbjct: 297 IHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGR 356
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
PDG++F G L ACSHAG ++ G +F+ M K + + PRIEHYGC+VDL SRAG L++A
Sbjct: 357 PDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHR 416
Query: 374 VVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL-VDLDPGVDSNY-VLLANMYAAV 431
++E+MPMKPN+ V G+LL CR + LA + + L ++L P + Y VLL+N+YA
Sbjct: 417 LIESMPMKPNDAVWGALLGGCRIHKNAELASHVAQKLALELKPDQAAGYLVLLSNVYATA 476
Query: 432 GKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
+W +R+ M G++K G S ++I +H+F+AGD +H + +Y ML ++
Sbjct: 477 KRWQDVALVRQKMVEIGVRKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEMLSKITRQA 536
Query: 492 KLCGY 496
KL GY
Sbjct: 537 KLEGY 541
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 148/360 (41%), Gaps = 51/360 (14%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
F +LL C IH + G + N ++ LL Y G + A VF+
Sbjct: 21 FFSLLQTCDTIKKL-----KQIHTQIIVNGFSQKNFLL-VKLLSFYITSGNLLNAHKVFE 74
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDA----ISWTALLNGFVKRGYFEE 198
+ S+ WN MI G+ + V +++ M +A +++ L+ G + E
Sbjct: 75 RIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLRE 134
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
+ + +G + S++N A G G+ R V + N+ N+L+
Sbjct: 135 GEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYD-GVRKARRVFDEIVDRNIVSWNSLLA 193
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
Y RCG ++ AR++F M +R +VSW ++I G A G +AL F+ M++ G K D V+
Sbjct: 194 GYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVA 253
Query: 319 FTGALTACSHAGLIEDGL---RYFD--------------------------IMKKIYRVS 349
AL+AC+ G ++ G Y D ++ K Y+V
Sbjct: 254 LVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVF 313
Query: 350 PRIEHYGCI-----VDLYSRAGRLEDALNVVENMPM------KPNEVVLGSLLAACRTKG 398
++ I + +++ G E+AL V + M +P+ + +L AC G
Sbjct: 314 IGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAG 373
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 115/312 (36%), Gaps = 75/312 (24%)
Query: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267
++G+ S+L C + L IH ++ F + L+ Y G +
Sbjct: 11 LTGLRALQQHFFSLLQTCDTIKKLKQ---IHTQIIVNGFSQKNFLLVKLLSFYITSGNLL 67
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
A +VF+R+ + WN +I G + + + +E +N M + +P+ +++ + C+
Sbjct: 68 NAHKVFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCA 127
Query: 328 HAGLIEDGLRY----------------------------FDIMKKIYR-----VSPRIEH 354
+ L+ +G + +D ++K R V I
Sbjct: 128 RSRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVS 187
Query: 355 YGCIVDLYSRAGRLEDALNVVENMP----------------------------------M 380
+ ++ Y R G ++ A + + MP +
Sbjct: 188 WNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGV 247
Query: 381 KPNEVVLGSLLAACRTKGDIILAERLMKYLVD-LDPGVDSNYVLLAN----MYAAVGKWD 435
K ++V L + L+AC GD+ L + Y+ + L G V L N MYA+ G D
Sbjct: 248 KLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVID 307
Query: 436 GAGKIRRTMKGR 447
A K+ M+ R
Sbjct: 308 KAYKVFIGMQQR 319
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 254/422 (60%), Gaps = 17/422 (4%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGA--MIHGLVCKLGLDRNNVMVGTALLDMYAKF-GRM 134
PNH + +L C +Q + G+ M+H V + G ++ V V TALLD Y +F +
Sbjct: 153 PNHFIYPHVLKSC----TQVVGPGSARMVHCQVLRSGFEQYPV-VQTALLDAYLRFWSDV 207
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
+ A ++FD M ++ +W AMI GY R G I +AV +F+EMP RD SW AL+ G+ + G
Sbjct: 208 ESARLLFDEMTERNVVSWTAMISGYTRLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNG 267
Query: 195 YFEEALECFREMQI-------SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
F EAL FR M G P+ VT + L+AC + G L +G WIH YV +
Sbjct: 268 LFMEALSLFRRMIAVEAGAWGQGNRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLG 327
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
+ V N L+D+Y +CGC++ AR+VF R +R+L SWNS+I A++G A+ F M
Sbjct: 328 LDSFVSNALVDMYGKCGCLKEARRVFDRTLERSLTSWNSMINCLALHGQSQNAISVFEEM 387
Query: 308 QK--EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
G KPD V+F G L AC+H GL+E G YF++M + Y + P+IEHYGC+VDL RA
Sbjct: 388 MTCGSGVKPDEVTFIGLLNACTHGGLVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLGRA 447
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLA 425
G+ E+A+ VV M ++P+EV+ GSLL C+ G LAE +K L+D+DP ++LA
Sbjct: 448 GQFEEAMEVVRGMRIEPDEVIWGSLLNGCKIHGHTDLAEFSIKKLIDMDPNNGGYGIMLA 507
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
N+Y +GKWD K+R+ +K + K PG S IEI + +H+F + D++H +E IY+ LE
Sbjct: 508 NIYGELGKWDEVRKVRKVLKEQNAHKTPGCSWIEIDNQVHQFYSVDKTHPRTEEIYNTLE 567
Query: 486 LL 487
L
Sbjct: 568 SL 569
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 121/258 (46%), Gaps = 43/258 (16%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTL-------HGTNPNHITFITLLSGCADFPSQCLFL 100
W + I+ + ++G EA F RM G PN +T + LS C + L L
Sbjct: 256 WNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRPNQVTAVCSLSACGH--TGMLRL 313
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G IHG V + GL ++ V AL+DMY K G + A VFD +S +WN+MI+
Sbjct: 314 GKWIHGYVYRNGLGLDS-FVSNALVDMYGKCGCLKEARRVFDRTLERSLTSWNSMINCLA 372
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G ++A+ +F+EM + C SGV+PD VT I
Sbjct: 373 LHGQSQNAISVFEEM------------------------MTCG-----SGVKPDEVTFIG 403
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMH- 277
+LNAC + G + G W++ ++ Q++ + ++ L+DL R G E A +V + M
Sbjct: 404 LLNACTHGGLVEKG-WLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRI 462
Query: 278 KRTLVSWNSIIVGFAVNG 295
+ V W S++ G ++G
Sbjct: 463 EPDEVIWGSLLNGCKIHG 480
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/499 (35%), Positives = 281/499 (56%), Gaps = 44/499 (8%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K+ V V S ++ H S +A L F M HG +P+H T+ +L A S+ L
Sbjct: 100 KNVVFFNVMIRSYVNNHLYS----DALLVFKNMAGHGIDPDHYTYPCVLK--ASSGSEDL 153
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
++G IH V ++GLD N V VG L+ MY K G + A V D M + +WN+++ G
Sbjct: 154 WVGMQIHAAVVRVGLDLN-VFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAG 212
Query: 159 YMRRGDIESAVRMFDEMPV-------------------------------------RDAI 181
R G + A+ + EM + + +
Sbjct: 213 CARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLV 272
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
SW ++ ++ EA++ F +M+ V+PD ++I SVL AC ++ L +G IH YV
Sbjct: 273 SWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYV 332
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
+++ + N+ + N LID+Y++CGC+E+AR+VF +M R +VSW S+I + +NG +A+
Sbjct: 333 VRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAV 392
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
F+ MQ G PD ++F L+ACSHAGL+++G YF +M + ++ PRIEH+ C+VDL
Sbjct: 393 SLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDL 452
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
RAG++++A ++ MPM+PNE V G+LL+ACR ++I+ L L P Y
Sbjct: 453 LGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYY 512
Query: 422 VLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIY 481
VLL+N+YA G+W+ +R MK +GI+K PG+S+ E+ + +H F+AGD+SH +S+ IY
Sbjct: 513 VLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIY 572
Query: 482 SMLELLSFDLKLCGYVPET 500
L++ +K GYVPET
Sbjct: 573 EELDVSVGKMKEAGYVPET 591
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 151/300 (50%), Gaps = 9/300 (3%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
++ Y G+ S +FDE+P ++ + + ++ +V + +AL F+ M G++PD
Sbjct: 77 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+ T VL A + L +G+ IH V++ NV V N LI +Y +CGC+ A +V
Sbjct: 137 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 196
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
+M R +VSWNS++ G A NG +ALE M+ G KPD + L A ++ L D
Sbjct: 197 QMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCL--D 254
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV---VENMPMKPNEVVLGSLL 391
+ + M + + + + ++ +Y +A+++ +E+ + P+ + + S+L
Sbjct: 255 NVSFVKEM-FMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVL 313
Query: 392 AACRTKGDIILAERLMKYLV--DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
AC ++L R+ +Y+V L P + L+ +MYA G + A ++ MK R +
Sbjct: 314 PACGDLSALLLGRRIHEYVVRKRLQPNLLLENALI-DMYAKCGCLEYAREVFDQMKFRDV 372
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/490 (36%), Positives = 280/490 (57%), Gaps = 36/490 (7%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAAL-EFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP V +++ R C +E AL + M + P +F +L+ C G
Sbjct: 38 NPNVLVFNALIRGCVHCCYSEQALVHYMHMLRNNVMPTSYSFSSLIKACTLLVDSAF--G 95
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM--------------------------- 134
+HG V K G D ++V V T L++ Y+ FG +
Sbjct: 96 EAVHGHVWKHGFD-SHVFVQTTLIEFYSTFGDVGGSRRVFDDMPERDVFAWTTMISAHVR 154
Query: 135 --DLATV--VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
D+A+ +FD M K+ TWNAMIDGY + G+ ESA +F++MP RD ISWT ++N +
Sbjct: 155 DGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARDIISWTTMMNCY 214
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
+ ++E + F ++ G+ PD VT+ +V++ACA++G L +G +H Y++ Q F +V
Sbjct: 215 SRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALALGKEVHLYLVLQGFDLDV 274
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
+ ++LID+Y++CG I+ A VF ++ + L WN II G A +G+V EAL F M+++
Sbjct: 275 YIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHGYVEEALRMFGEMERK 334
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
+P+ V+F LTAC+HAG IE+G R+F M + Y ++P++EHYGC+VDL S+AG LED
Sbjct: 335 RIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHYGCMVDLLSKAGLLED 394
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
AL ++ NM ++PN + G+LL C+ ++ +A ++ L+ L+P +Y LL NMYA
Sbjct: 395 ALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVLEPSNSGHYSLLVNMYAE 454
Query: 431 VGKWDGAGKIRRTMKGRGIQKK-PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSF 489
+W+ KIR TMK G++K+ PG S +EI +H F A D H ++ +L L
Sbjct: 455 ENRWNEVAKIRTTMKDLGVEKRCPGSSWVEINKTVHLFAASDTYHPSYSQLHLLLAELDD 514
Query: 490 DLKLCGYVPE 499
L+L GYVPE
Sbjct: 515 QLRLAGYVPE 524
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 19/298 (6%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+ F N I I A F + + + + AL+ G V Y E+AL + M
Sbjct: 8 QDCFLVNQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQALVHYMHM 67
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
+ V P + S++ AC + G +H +V K F +V V TLI+ YS G +
Sbjct: 68 LRNNVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGDV 127
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
+R+VF M +R + +W ++I +G + A F+ M ++ ++ +
Sbjct: 128 GGSRRVFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNV----ATWNAMIDGY 183
Query: 327 SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM---PMKPN 383
G E F+ M + I + +++ YSR R ++ + + ++ M P+
Sbjct: 184 GKLGNAESAEFLFNQMP-----ARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPD 238
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLV----DLDPGVDSNYVLLANMYAAVGKWDGA 437
EV + ++++AC G + L + + YLV DLD + S+ L +MYA G D A
Sbjct: 239 EVTMTTVISACAHLGALALGKEVHLYLVLQGFDLDVYIGSS---LIDMYAKCGSIDMA 293
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 270/455 (59%), Gaps = 3/455 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + +S + + G E + M G P+ +T ++ ++ CA L +G H
Sbjct: 290 VMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGD--LSVGKSSH 347
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + GL+R + + A++DMY K G+ + A VFD+M K+ TWN++I G +R G++
Sbjct: 348 AYVFRNGLERLD-NISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGEL 406
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A+R+F EMP + +SW ++ V+ FEEA++ REMQ G++ D VT++ + +AC
Sbjct: 407 ELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASAC 466
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+G L + WI+ Y+ K D ++++ L+D++SRCG A +VF+ M KR + +W
Sbjct: 467 GYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWT 526
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+ I AV G A+E F+ M K+ K D F LTA SH G ++ G + F M+KI
Sbjct: 527 AAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKI 586
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ VSP+I HYGC+VDL RAG LE+A +++++MP+KPN+V+ GS LAACR ++ A
Sbjct: 587 HGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANY 646
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ + L P +VLL+N+YA+ GKW+ ++R MK +G QK G SSIE+ I
Sbjct: 647 ADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIR 706
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
EF +GD SH E+ I ML+ ++ + GYVP+T
Sbjct: 707 EFTSGDESHTENAQIGLMLQEINCRISQVGYVPDT 741
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 211/463 (45%), Gaps = 79/463 (17%)
Query: 52 ISRHCRSGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCK 110
I + SG EA + M + G P++ TF LLS C+ + G +HG+V K
Sbjct: 93 IRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMA--FSEGVQVHGVVVK 150
Query: 111 LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR 170
+GL VK F N++I Y G ++ +
Sbjct: 151 MGL--------------------------------VKDLFVANSLIHFYAACGKVDLGRK 178
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+FDEM R+ +SWT+L+NG+ +EA+ F EM GVEP+ VT++ ++ACA +
Sbjct: 179 VFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKD 238
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
L +G + + + K N V N L+D+Y +CG + R++F + LV +N+I+
Sbjct: 239 LELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSN 298
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC-----------SHAGLIEDGLRYF 339
+ +G GE L + M ++G +PD V+ + AC SHA + +GL
Sbjct: 299 YVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERL 358
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
D + I+D+Y + G+ E A V ++M K V SL+A G+
Sbjct: 359 DNIS------------NAIIDMYMKCGKREAACKVFDSMSNK-TVVTWNSLIAGLVRDGE 405
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGK---WDGAGKIRRTMKGRGIQ----KK 452
+ LA R+ + P +SN V M A+ + ++ A + R M+ +GI+
Sbjct: 406 LELALRIFGEM----P--ESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTM 459
Query: 453 PGLSS-------IEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
G++S +++ I+ ++ + HI+ + +++++ S
Sbjct: 460 VGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFS 502
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 174/417 (41%), Gaps = 89/417 (21%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WTS I+ + EA F M G PN +T + +S CA L LG +
Sbjct: 188 VVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKD--LELGKKV 245
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
L+ +LG+ ++N +V ALLDMY K G M +FD K+ +N ++ Y
Sbjct: 246 CNLMTELGV-KSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNY----- 299
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
V+ G E L EM G PD VT++S + A
Sbjct: 300 --------------------------VQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAA 333
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA +G L +G H YV + + + N +ID+Y +CG E A +VF M +T+V+W
Sbjct: 334 CAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTW 393
Query: 285 NSIIVGFAVNG----------------------FVG---------EALEYFNSMQKEGFK 313
NS+I G +G +G EA++ MQ +G K
Sbjct: 394 NSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIK 453
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR------IEHYGCIVDLYSRAGR 367
D V+ G +AC + G + D+ K IY + ++ +VD++SR G
Sbjct: 454 GDRVTMVGIASACGYLGAL-------DLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGD 506
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRT-------KGDIILAERLMKYLVDLDPGV 417
+A+ V ENM + + + AA R KG I L + ++K V D V
Sbjct: 507 PLNAMRVFENMEKRD----VSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFV 559
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 159/350 (45%), Gaps = 48/350 (13%)
Query: 144 MRVKSSFTWNAMIDGYMRRGDIES---AVRMF--DEMPVRDAISWTALLNGFVKRGYFEE 198
M K F N +I ++ G ES A+ F DE + L+ G+ G +E
Sbjct: 45 MLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIRGYAASGLCKE 104
Query: 199 ALECFREMQIS-GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
A+ + M I G+ PD T +L+AC+ + G+ +H V+K ++ V N+LI
Sbjct: 105 AIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLI 164
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
Y+ CG ++ R+VF M +R +VSW S+I G++V EA+ F M + G +P+ V
Sbjct: 165 HFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPV 224
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKI----------------------YRVSPRIEH- 354
+ A++AC+ +E G + ++M ++ Y V +
Sbjct: 225 TMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEF 284
Query: 355 -------YGCIVDLYSRAGRLEDALNVVENMPMK---PNEVVLGSLLAACRTKGDIILAE 404
Y I+ Y + G + L V++ M K P++V + S +AAC GD+ + +
Sbjct: 285 SDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGK 344
Query: 405 RLMKYLVDLDPGVD-----SNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
Y+ G++ SN ++ +MY GK + A K+ +M + +
Sbjct: 345 SSHAYV--FRNGLERLDNISNAII--DMYMKCGKREAACKVFDSMSNKTV 390
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 288/524 (54%), Gaps = 72/524 (13%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I+ + GRI EA L F +M G PN +TF+++L C+ PS L G I
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS-PS-ALKRGQQIQ 436
Query: 106 GLVCKLG------------------------------LDRNNVMVGTALLDMYAKFGRMD 135
+ + G + + NV+ A++ Y + + D
Sbjct: 437 DHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYD 496
Query: 136 LATVVFDAMRVK------SSFT----------------W-----------------NAMI 156
A F A+ + S+FT W NA++
Sbjct: 497 NALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALV 556
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
++ GD+ SA +F++MP RD +SW ++ GFV+ G + A + F+ MQ SG++PD +
Sbjct: 557 SMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKI 616
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T +LNACA+ L G +H + + F +V V LI +Y++CG IE A QVF ++
Sbjct: 617 TFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKL 676
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
K+ + SW S+I G+A +G EALE F MQ+EG KPD ++F GAL+AC+HAGLIE+GL
Sbjct: 677 PKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGL 736
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+F MK+ + + PR+EHYGC+VDL+ RAG L +A+ + M ++P+ V G+LL AC+
Sbjct: 737 HHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQV 795
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
++ LAE+ + ++LDP + +V+L+N+YAA G W K+R+ M RG+ KKPG S
Sbjct: 796 HLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IE+ +H F + D++H ++E I++ LE L +++ GYVP+T
Sbjct: 856 WIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDT 899
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 170/337 (50%), Gaps = 37/337 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WTS I+ R GR +A F RM G P+ + F++LL C + P + L G +H
Sbjct: 278 VTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRAC-NHP-EALEQGKKVH 335
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ ++G D + VGTA+L MY K G M
Sbjct: 336 ARMKEVGWD-TEIYVGTAILSMYTKCGSM------------------------------- 363
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A+ +FD + R+ +SWTA++ GF + G +EA F +M SG+EP+ VT +S+L AC
Sbjct: 364 EDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGAC 423
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++ L G I ++++ + + +V L+ +Y++CG ++ A +VF+++ K+ +V+WN
Sbjct: 424 SSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWN 483
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKK 344
++I + + AL F ++ KEG KP+ +FT L C + +E G +F IMK
Sbjct: 484 AMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA 543
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ + +V ++ G L A N+ +MP +
Sbjct: 544 GLESDLHVSN--ALVSMFVNCGDLMSAKNLFNDMPKR 578
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 175/347 (50%), Gaps = 38/347 (10%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + + + G EA +M P+ TF+++L+ CAD ++ + G ++ L
Sbjct: 179 WNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACAD--ARNVDKGRELYNL 236
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ K G D ++ VGTAL++M+ K G DI
Sbjct: 237 ILKAGWD-TDLFVGTALINMHIKCG-------------------------------DIGD 264
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++FD +P RD ++WT+++ G + G F++A F+ M+ GV+PD V +S+L AC +
Sbjct: 265 ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNH 324
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
L G +H + + + + V ++ +Y++CG +E A +VF + R +VSW ++
Sbjct: 325 PEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAM 384
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKKIY 346
I GFA +G + EA +FN M + G +P+ V+F L ACS ++ G + D I++ Y
Sbjct: 385 IAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGY 444
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
R+ ++ +Y++ G L+DA V E + K N V +++ A
Sbjct: 445 GSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITA 488
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 174/359 (48%), Gaps = 42/359 (11%)
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSS-----FTWNAMIDGYMRRGDIESAVRMFDEMP 176
+ALL + KF + +++ ++ KS F N +I+ Y + G+ SA ++FD+M
Sbjct: 114 SALLQLCIKFKNLGDGERIYNHIK-KSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMR 172
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
+D SW LL G+V+ G +EEA + +M V+PD T +S+LNACA+ + G
Sbjct: 173 EKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRE 232
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
++ +LK + ++ V LI+++ +CG I A +VF + R LV+W S+I G A +G
Sbjct: 233 LYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGR 292
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG 356
+A F M++EG +PD V+F L AC+H +E G + MK++ I
Sbjct: 293 FKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEV-GWDTEIYVGT 351
Query: 357 CIVDLYSRAGRLEDAL---------NVVENMPM-------------------------KP 382
I+ +Y++ G +EDAL NVV M +P
Sbjct: 352 AILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411
Query: 383 NEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-VLLANMYAAVGKWDGAGKI 440
N V S+L AC + + +++ ++++ G D L +MYA G A ++
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRV 470
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 143/309 (46%), Gaps = 38/309 (12%)
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
++D A+LN K G F EA++ + S ++ T ++L C LG G
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
I+ ++ K + ++ + NTLI++Y++CG A+Q+F M ++ + SWN ++ G+ +G
Sbjct: 132 IYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK------IYRVSP 350
EA + M ++ KPD +F L AC+ A ++ G ++++ K ++ +
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTA 251
Query: 351 RIE-HYGC-----------------------IVDLYSRAGRLEDALNVVENMP---MKPN 383
I H C ++ +R GR + A N+ + M ++P+
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPD 311
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN-YVLLA--NMYAAVGKWDGAGKI 440
+V SLL AC + +++ + ++ G D+ YV A +MY G + A ++
Sbjct: 312 KVAFVSLLRACNHPEALEQGKKVHARMKEV--GWDTEIYVGTAILSMYTKCGSMEDALEV 369
Query: 441 RRTMKGRGI 449
+KGR +
Sbjct: 370 FDLVKGRNV 378
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/462 (38%), Positives = 276/462 (59%), Gaps = 27/462 (5%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ + ++G +EA F RM G P+ +T +++S CA + L G IH
Sbjct: 214 VTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCA--LKEGLQIH 271
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V K R+++++G AL+DMYAK +++ A VFD M +++ + +M+ GY R +
Sbjct: 272 ARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASV 331
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
++A MF +M R+ +SW AL+ G+ + G EEAL FR ++ + P + T ++L
Sbjct: 332 KAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLL--- 388
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
K ++ V N+LID+Y +CG IE +VF++M +R VSWN
Sbjct: 389 ---------------------KSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWN 427
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+IIVG+A NG+ EAL+ F M G KPD V+ G L ACSHAGL+E+G YF M++
Sbjct: 428 AIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE- 486
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ + P +HY C+VDL RAG L +A N++E MP+ P+ VV GSLLAAC+ G+I + +
Sbjct: 487 HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKH 546
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ L+++DP YVLL+NMYA +G+W ++R+ M+ +G+ K+PG S IE+ S +H
Sbjct: 547 AAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVH 606
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYE 507
F+ D+SH + IYS+L++L+ +K GY+P+ E Y+
Sbjct: 607 VFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDFEAYD 648
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 172/332 (51%), Gaps = 9/332 (2%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHG--LVCKLGLDRNNVMVGTALLDMYAKFGRMD 135
PN F LL C S+ ++H L+ + ++ + + L+D+Y K +D
Sbjct: 13 PNSSPFAKLLDSC--LRSRSARGTRLVHARILMTQFSME---IFIQNRLIDVYGKCDCLD 67
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
A +FD M +++FTWN++I + G ++ A R+F MP D SW ++++GF +
Sbjct: 68 DARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDR 127
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
FEE+LE F +M + + S L+ACA + L +G +H V K + +V + +
Sbjct: 128 FEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSA 187
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
LID+YS+CG + A +VF M +R LV+WNS+I + NG EALE F M G +PD
Sbjct: 188 LIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPD 247
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V+ ++AC+ +++GL+ + K + + +VD+Y++ ++ +A V
Sbjct: 248 EVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVF 307
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ M ++ VV + + + + + A R M
Sbjct: 308 DRMSIR--NVVSETSMVSGYARAASVKAARFM 337
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 182/431 (42%), Gaps = 116/431 (26%)
Query: 45 TVQWTSSISRHCRSGRIAEAA------------------------------LE-FTRMTL 73
T W S IS +SG + EAA LE F +M
Sbjct: 81 TFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHR 140
Query: 74 HGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR 133
N +F + LS CA L +G +H LV K +V +G+AL+DMY+K G
Sbjct: 141 EDFLLNEYSFGSALSACAGLMD--LNMGTQVHALVSKSRYS-TDVYMGSALIDMYSKCGS 197
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR 193
+ A VF M ++ TWN++I Y + G
Sbjct: 198 VACAEEVFSGMIERNLVTWNSLITCYEQNGPA---------------------------- 229
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD-FKDNVKV 252
EALE F M SG+EPD VT+ SV++ACA++ L GL IH V+K + F+D++ +
Sbjct: 230 ---SEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVL 286
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMH-------------------------------KRTL 281
N L+D+Y++C + AR+VF RM +R +
Sbjct: 287 GNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNV 346
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA-----------CSHAG 330
VSWN++I G+ NG EAL F +++E P +F L + G
Sbjct: 347 VSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCG 406
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVL 387
IEDG R F+ MK+ VS + I+ Y++ G +AL + M + KP+ V +
Sbjct: 407 SIEDGSRVFEKMKERDCVS-----WNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTM 461
Query: 388 GSLLAACRTKG 398
+L AC G
Sbjct: 462 IGVLCACSHAG 472
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 111/264 (42%), Gaps = 69/264 (26%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
SK T V W + I+ + ++G EA F + P H TF LL
Sbjct: 339 SKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLL---------- 388
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
++++ VG +L+DMY K G ++ + VF+ M+ + +WNA+I
Sbjct: 389 -----------------KSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIV 431
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GY + GY EAL+ FR+M + G +PD+VT
Sbjct: 432 GY-------------------------------AQNGYGAEALQIFRKMLVCGEKPDHVT 460
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQD-----FKDNVKVCNTLIDLYSRCGCIEFARQV 272
+I VL AC++ G + G H + ++ KD+ ++DL R GC+ A+ +
Sbjct: 461 MIGVLCACSHAGLVEEGR--HYFFSMEEHGLIPLKDHY---TCMVDLLGRAGCLNEAKNL 515
Query: 273 FQRMH-KRTLVSWNSIIVGFAVNG 295
+ M V W S++ V+G
Sbjct: 516 IEAMPVNPDAVVWGSLLAACKVHG 539
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/409 (42%), Positives = 257/409 (62%), Gaps = 13/409 (3%)
Query: 102 AMIHGLV--------CKL---GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF 150
+MI GLV CKL DR+ V T +LD YAK G MD A +F+ M ++
Sbjct: 193 SMIGGLVRCGELQGACKLFDEMPDRDMVSWNT-MLDGYAKAGEMDTAFELFERMPWRNIV 251
Query: 151 TWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG 210
+W+ M+ GY + GD++ A +FD PV++ + WT ++ G+ ++G EA E + +M+ +G
Sbjct: 252 SWSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAG 311
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
+ PD ++S+L ACA G LG+G IH + + F+ KV N ID+Y++CGC++ A
Sbjct: 312 MRPDDGFLLSILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAF 371
Query: 271 QVFQ-RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
VF M K+ +VSWNS+I GFA++G +ALE F+ M +EGF+PD +F G L AC+HA
Sbjct: 372 DVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHA 431
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
GL+ +G +YF M+K+Y + P++EHYGC++DL R G L++A ++ +MPM+PN ++LG+
Sbjct: 432 GLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGT 491
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
LL ACR D+ LA + + L L+P NY LL+N+YA G W +R MK G
Sbjct: 492 LLNACRMHNDVDLARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGG 551
Query: 450 QKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+K G SSIE+ +HEF D+SH +S+ IY M++ L DL+ GYVP
Sbjct: 552 EKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYQMIDRLVQDLRQVGYVP 600
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 185/409 (45%), Gaps = 59/409 (14%)
Query: 18 QQNPNQNLTTTPQI----------SIQTNNSKSTVNPTVQWTSSISR---HCRSGRIAEA 64
+ N +Q+L P++ + N +P V +SI R H S R +
Sbjct: 46 KANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNSSHR-SLP 104
Query: 65 ALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTAL 124
F +M +G P++ T+ LL C+ PS L L MIH V K+G ++ V +L
Sbjct: 105 FNAFFQMQKNGLFPDNFTYPFLLKACSG-PSS-LPLVRMIHAHVEKIGF-YGDIFVPNSL 161
Query: 125 LDMYAKFGR--MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
+D Y++ G +D A +F AM + TWN+MI G +R G+++ A ++FDEMP RD +S
Sbjct: 162 IDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEMPDRDMVS 221
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
W +L+G+ K G + A E F M W
Sbjct: 222 WNTMLDGYAKAGEMDTAFELFERMP----------------------------W------ 247
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
N+ +T++ YS+ G ++ AR +F R + +V W +II G+A G EA E
Sbjct: 248 -----RNIVSWSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATE 302
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
+ M++ G +PD L AC+ +G++ G R M++ +R + +D+Y
Sbjct: 303 LYGKMEEAGMRPDDGFLLSILAACAESGMLGLGKRIHASMRR-WRFRCGAKVLNAFIDMY 361
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
++ G L+ A +V M K + V S++ G A L ++V
Sbjct: 362 AKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMV 410
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 102/237 (43%), Gaps = 23/237 (9%)
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+ C N+ ++ IH VLK + ++ V LI +S C + A VF + +
Sbjct: 28 LHKCTNLDSVN---QIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNV 84
Query: 282 VSWNSIIVGFAVN-GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+NSII A N F MQK G PD ++ L ACS G
Sbjct: 85 HLYNSIIRAHAHNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACS-------GPSSLP 137
Query: 341 IMKKIYRVSPRIEHYGCI------VDLYSRAGR--LEDALNVVENMPMKPNEVVLGSLLA 392
+++ I+ +I YG I +D YSR G L+ A+++ M + + V S++
Sbjct: 138 LVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEER-DVVTWNSMIG 196
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
G++ A +L + D D V N +L + YA G+ D A ++ M R I
Sbjct: 197 GLVRCGELQGACKLFDEMPDRDM-VSWNTML--DGYAKAGEMDTAFELFERMPWRNI 250
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 288/524 (54%), Gaps = 72/524 (13%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I+ + GRI EA L F +M G PN +TF+++L C+ PS L G I
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS-PS-ALKRGQQIQ 436
Query: 106 GLVCKLG------------------------------LDRNNVMVGTALLDMYAKFGRMD 135
+ + G + + NV+ A++ Y + + D
Sbjct: 437 DHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYD 496
Query: 136 LATVVFDAMRVK------SSFT----------------W-----------------NAMI 156
A F A+ + S+FT W NA++
Sbjct: 497 NALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALV 556
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
++ GD+ SA +F++MP RD +SW ++ GFV+ G + A + F+ MQ SG++PD +
Sbjct: 557 SMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKI 616
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T +LNACA+ L G +H + + F +V V LI +Y++CG IE A QVF ++
Sbjct: 617 TFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKL 676
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
K+ + SW S+I G+A +G EALE F MQ+EG KPD ++F GAL+AC+HAGLIE+GL
Sbjct: 677 PKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGL 736
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+F MK+ + + PR+EHYGC+VDL+ RAG L +A+ + M ++P+ V G+LL AC+
Sbjct: 737 HHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQV 795
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
++ LAE+ + ++LDP + +V+L+N+YAA G W K+R+ M RG+ KKPG S
Sbjct: 796 HLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IE+ +H F + D++H ++E I++ LE L +++ GYVP+T
Sbjct: 856 WIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDT 899
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 170/337 (50%), Gaps = 37/337 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WTS I+ R GR +A F RM G P+ + F++LL C + P + L G +H
Sbjct: 278 VTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRAC-NHP-EALEQGKKVH 335
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ ++G D + VGTA+L MY K G M
Sbjct: 336 ARMKEVGWD-TEIYVGTAILSMYTKCGSM------------------------------- 363
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A+ +FD + R+ +SWTA++ GF + G +EA F +M SG+EP+ VT +S+L AC
Sbjct: 364 EDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGAC 423
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++ L G I ++++ + + +V L+ +Y++CG ++ A +VF+++ K+ +V+WN
Sbjct: 424 SSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWN 483
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKK 344
++I + + AL F ++ KEG KP+ +FT L C + +E G +F IMK
Sbjct: 484 AMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA 543
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ + +V ++ G L A N+ +MP +
Sbjct: 544 GLESDLHVSN--ALVSMFVNCGDLMSAKNLFNDMPKR 578
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 175/347 (50%), Gaps = 38/347 (10%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + + + G EA +M P+ TF+++L+ CAD ++ + G ++ L
Sbjct: 179 WNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACAD--ARNVDKGRELYNL 236
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ K G D ++ VGTAL++M+ K G DI
Sbjct: 237 ILKAGWD-TDLFVGTALINMHIKCG-------------------------------DIGD 264
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++FD +P RD ++WT+++ G + G F++A F+ M+ GV+PD V +S+L AC +
Sbjct: 265 ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNH 324
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
L G +H + + + + V ++ +Y++CG +E A +VF + R +VSW ++
Sbjct: 325 PEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAM 384
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKKIY 346
I GFA +G + EA +FN M + G +P+ V+F L ACS ++ G + D I++ Y
Sbjct: 385 IAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGY 444
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
R+ ++ +Y++ G L+DA V E + K N V +++ A
Sbjct: 445 GSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITA 488
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 175/359 (48%), Gaps = 42/359 (11%)
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSS-----FTWNAMIDGYMRRGDIESAVRMFDEMP 176
+ALL + KF + +++ ++ KS F WN +I+ Y + G+ SA ++FD+M
Sbjct: 114 SALLQLCIKFKNLGDGERIYNHIK-KSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMR 172
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
+D SW LL G+V+ G +EEA + +M V+PD T +S+LNACA+ + G
Sbjct: 173 EKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRE 232
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
++ +LK + ++ V LI+++ +CG I A +VF + R LV+W S+I G A +G
Sbjct: 233 LYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGR 292
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG 356
+A F M++EG +PD V+F L AC+H +E G + MK++ I
Sbjct: 293 FKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEV-GWDTEIYVGT 351
Query: 357 CIVDLYSRAGRLEDAL---------NVVENMPM-------------------------KP 382
I+ +Y++ G +EDAL NVV M +P
Sbjct: 352 AILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411
Query: 383 NEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-VLLANMYAAVGKWDGAGKI 440
N V S+L AC + + +++ ++++ G D L +MYA G A ++
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRV 470
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 143/309 (46%), Gaps = 38/309 (12%)
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
++D A+LN K G F EA++ + S ++ T ++L C LG G
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
I+ ++ K + ++ + NTLI++Y++CG A+Q+F M ++ + SWN ++ G+ +G
Sbjct: 132 IYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK------IYRVSP 350
EA + M ++ KPD +F L AC+ A ++ G ++++ K ++ +
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTA 251
Query: 351 RIE-HYGC-----------------------IVDLYSRAGRLEDALNVVENMP---MKPN 383
I H C ++ +R GR + A N+ + M ++P+
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPD 311
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN-YVLLA--NMYAAVGKWDGAGKI 440
+V SLL AC + +++ + ++ G D+ YV A +MY G + A ++
Sbjct: 312 KVAFVSLLRACNHPEALEQGKKVHARMKEV--GWDTEIYVGTAILSMYTKCGSMEDALEV 369
Query: 441 RRTMKGRGI 449
+KGR +
Sbjct: 370 FDLVKGRNV 378
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/457 (36%), Positives = 282/457 (61%), Gaps = 4/457 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WTS I+ + R+GR A+A F M G P+ + I LS C+ + L +
Sbjct: 202 VVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHL 261
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM-RVKSSFTWNAMIDGYMRRG 163
++ + N V+ AL+DMYAK G + A VFDA+ R + WNA+IDGY + G
Sbjct: 262 LVGQKRIRMTDNLVV---ALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLG 318
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
++ A +FD+M RD I++ +++ G++ G +AL+ F +M+ G+ D T++S+L
Sbjct: 319 HVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLT 378
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA++G L G +H + ++ +++V + L+D+Y +CG ++ A VF RM +R + +
Sbjct: 379 ACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHT 438
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W ++I G A NG +ALE F M+++GF+P V++ LTACSH+ L+++G +F+ M+
Sbjct: 439 WTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMR 498
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
++++ P++EHYGC++DL +R+G L++A+++V+ MPM+PN V+ GS+L+ACR +I LA
Sbjct: 499 SLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLA 558
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
++L+ L P D+ YV L N+Y +W A ++R M+ RG++K G SSI +
Sbjct: 559 RHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQ 618
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H+F+A D+SH + I +M+E ++ LK GY P T
Sbjct: 619 VHKFVANDQSHPWTLEIMAMMEEIACRLKSVGYSPVT 655
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 162/358 (45%), Gaps = 50/358 (13%)
Query: 54 RHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGL 113
R RSG + A F H F +G CL M+H + L
Sbjct: 91 RRMRSGGVRTGAFTF-----------HFVFRCCAAGARARAGLCL----MLHAACLRTML 135
Query: 114 DRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
+V L+ MYA G D A FD + K + W +I G +R G ++ A R+
Sbjct: 136 PSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLV 195
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI 233
+ P R+ +SWT+L+ G+ + G +A+ CF M GV PD V +I L+AC+ + L +
Sbjct: 196 QAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDL 255
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG----------------------------C 265
G +H V ++ + + LID+Y++CG C
Sbjct: 256 GRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYC 315
Query: 266 ----IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
++ AR +F +M R ++++NS+I G+ +G + +AL+ F M++ G + D +
Sbjct: 316 KLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVS 375
Query: 322 ALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
LTAC+ G + G + I ++I V + ++D+Y + GR+++A V M
Sbjct: 376 LLTACASLGALPHGRALHASIEQRI--VEEDVYLGTALLDMYMKCGRVDEATAVFHRM 431
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/460 (39%), Positives = 264/460 (57%), Gaps = 33/460 (7%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPSQCLFLG 101
NP ++I R + EAAL LH + P+ TF L C F + G
Sbjct: 70 NPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSG--VEEG 127
Query: 102 AMIHGLVCKLGL---------------------------DR---NNVMVGTALLDMYAKF 131
IHG V K GL DR +V+ ALL YA+
Sbjct: 128 RQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAER 187
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
G M+LA +FD M ++ +WN MI GY+ G +E A R+F E PV++ +SW A++ G+
Sbjct: 188 GLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYS 247
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
G F E L F +MQ +GV+PD T++SVL+ACA+VG L G W+H Y+ K +
Sbjct: 248 HAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGF 307
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
V L+D+YS+CG IE A +VF ++ + +WNSII G + +G AL+ F+ M EG
Sbjct: 308 VATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEG 367
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
FKP+ V+F L+ACS AGL+++G F++M ++ + P IEHYGC+VDL R G LE+A
Sbjct: 368 FKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEA 427
Query: 372 LNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAV 431
+V+ MP K VV SLL ACR G++ LAER+ + L++L P S++V L+NMYA++
Sbjct: 428 EELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASM 487
Query: 432 GKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGD 471
G+W ++R+ M+ +G++K PG S IE+ ++EF+AG+
Sbjct: 488 GRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTVYEFLAGE 527
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 146/323 (45%), Gaps = 19/323 (5%)
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
+ L +A + L F A R+ +S + N+ I A +F +P ++
Sbjct: 21 SELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQA------IPYAHSIFSRIPNPNSY 74
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
W ++ + E AL F +M + V PD T L +C + + G IH +V
Sbjct: 75 MWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHV 134
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
LK D++ + NTLI LY+ CGCIE AR + RM +R +VSWN+++ +A G + A
Sbjct: 135 LKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELAC 194
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
F+ M + + +G + GL+E+ R F VS + ++
Sbjct: 195 HLFDEMTERNVESWNFMISGYVG----VGLLEEARRVFGETPVKNVVS-----WNAMITG 245
Query: 362 YSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD 418
YS AGR + L + E+M +KP+ L S+L+AC G + E + Y+ +D
Sbjct: 246 YSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISID 305
Query: 419 SNYVL-LANMYAAVGKWDGAGKI 440
L +MY+ G + A ++
Sbjct: 306 GFVATALVDMYSKCGSIEKALEV 328
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 146/343 (42%), Gaps = 75/343 (21%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
++ V V W + I+ + +GR +E + F M G P++ T +++LS CA + L
Sbjct: 230 ETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGA--L 287
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G +H + K G+ + V TAL+DMY+K G ++ A VF++ K TWN++I G
Sbjct: 288 SQGEWVHAYIDKNGISIDG-FVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISG 346
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
G + A+++F EM V G +P+ VT
Sbjct: 347 LSTHGSGQHALQIFSEMLVE-------------------------------GFKPNEVTF 375
Query: 219 ISVLNACANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM- 276
+ VL+AC+ G L G + ++ + ++ ++DL R G +E A ++ Q+M
Sbjct: 376 VCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMP 435
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
K V W S+ L AC + G +E
Sbjct: 436 QKEASVVWESL-----------------------------------LGACRNHGNVELAE 460
Query: 337 RYFDIMKKIYRVSPR-IEHYGCIVDLYSRAGRLEDALNVVENM 378
R + +K+ +SP+ + + ++Y+ GR +D + V + M
Sbjct: 461 R---VAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKM 500
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/450 (38%), Positives = 269/450 (59%), Gaps = 17/450 (3%)
Query: 65 ALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTAL 124
L + M+ PN TF ++L CA + + G IHGL K G + V + L
Sbjct: 113 TLFYEMMSDEFVEPNRFTFPSVLKACA--KTGKIQEGKQIHGLALKYGFG-GDEFVMSNL 169
Query: 125 LDMYAKFGRMDLATVVFDAMRVKSSFT--------------WNAMIDGYMRRGDIESAVR 170
+ MY G M A V+F ++ WN MIDGYMR GD ++A
Sbjct: 170 VRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARM 229
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+FD+M R +SW +++G+ G+F++A+E FREM+ + P+YVT++SVL A + +G+
Sbjct: 230 LFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGS 289
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
L +G W+H Y + + + + LID+YS+CG IE A VF+R+ + +++W+++I G
Sbjct: 290 LELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMING 349
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
FA++G G+A++ F M++ G +P V++ LTACSH GL+E+G RYF M + + P
Sbjct: 350 FAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEP 409
Query: 351 RIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
RIEHYGC+VDL R+G L++A + NMP+KP++V+ +LL ACR +G++ + +R+ L
Sbjct: 410 RIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANIL 469
Query: 411 VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAG 470
+D+ P YV L+NMYA+ G W ++R MK + I+K PG S I+I +HEF+
Sbjct: 470 MDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVE 529
Query: 471 DRSHIESEHIYSMLELLSFDLKLCGYVPET 500
D SH +++ I SML +S L+L GY P T
Sbjct: 530 DDSHPKAKEINSMLVEISDKLRLAGYRPIT 559
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 123/275 (44%), Gaps = 71/275 (25%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE--ALECFREMQISG-VEPDYVTIIS 220
D++ A ++F++MP R+ SW ++ GF + + A+ F EM VEP+ T S
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDF--------------------KD------------ 248
VL ACA G + G IH LK F KD
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 249 -------------NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
+ + N +ID Y R G + AR +F +M +R++VSWN++I G+++NG
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE-----------DGLRYFDIMKK 344
F +A+E F M+K +P+ V+ L A S G +E G+R D++
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG- 312
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
++D+YS+ G +E A++V E +P
Sbjct: 313 -----------SALIDMYSKCGIIEKAIHVFERLP 336
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 125/299 (41%), Gaps = 69/299 (23%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + IS + +G +A F M PN++T +++L + S L LG +
Sbjct: 239 VVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGS--LELGEWL 296
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H G+ ++V+ G+AL+DMY+K G ++ A VF+ + ++ TW+AMI
Sbjct: 297 HLYAEDSGIRIDDVL-GSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMI-------- 347
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
NGF G +A++CF +M+ +GV P V I++L A
Sbjct: 348 -----------------------NGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Query: 225 CANVGTLGIG-LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
C++ G + G + + V + ++ ++DL R
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGR--------------------- 423
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+G + EA E+ +M KPD V + L AC G +E G R +I+
Sbjct: 424 ----------SGLLDEAEEFILNMP---IKPDDVIWKALLGACRMQGNVEMGKRVANIL 469
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/431 (38%), Positives = 255/431 (59%), Gaps = 3/431 (0%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
+KS V V W S I+ + G EA + M PN IT I ++S C+ Q
Sbjct: 217 NKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQV--QD 274
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L LG H + + GL+ + + AL+DMY K G + A V+FD M K+ +W M+
Sbjct: 275 LNLGKEFHCYIKEHGLEFT-IPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVL 333
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GY R G ++ A + ++P + + W A+++G V+ +EAL F EMQI +EPD VT
Sbjct: 334 GYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVT 393
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+++ L+AC+ +G L +G+WIH Y+ + +V + L+D+Y++CG I A QVF+ +
Sbjct: 394 MVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIP 453
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+R ++W ++I G A++G +AL YF+ M G PD ++F G L+AC H GL+E+G +
Sbjct: 454 QRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRK 513
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF M + VSP+++HY C+VDL RAG LE+A +V+NMPM + VLG+L ACR
Sbjct: 514 YFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVY 573
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G++ + ER L+++DP NYVLLA+MY+ W A R+ M +G++K PG S
Sbjct: 574 GNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSL 633
Query: 458 IEIGSGIHEFM 468
+EI +HEF+
Sbjct: 634 VEINGIVHEFV 644
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 175/366 (47%), Gaps = 67/366 (18%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMIHG 106
W ++I + SG I + + RM L GT P++ T+ LL GC S CL LG + H
Sbjct: 125 WNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHV 184
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
L KFG F+ F NA I + G++
Sbjct: 185 L----------------------KFG--------FEC----DIFVHNASITMLLSCGELS 210
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A +F++ VRD ++W +++ G VKRG EA++ ++EM+ V P+ +T+I ++++C+
Sbjct: 211 VAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCS 270
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
V L +G H Y+ + + + + N L+D+Y +CG + AR +F M ++TLVSW +
Sbjct: 271 QVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTT 330
Query: 287 IIVGFAVNGFVG-------------------------------EALEYFNSMQKEGFKPD 315
+++G+A GF+ EAL F+ MQ +PD
Sbjct: 331 MVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPD 390
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V+ L+ACS G ++ G+ +++ +++S + +VD+Y++ G + AL V
Sbjct: 391 KVTMVNCLSACSQLGALDVGIWIHHYIER-HKLSIDVALGTALVDMYAKCGNIARALQVF 449
Query: 376 ENMPMK 381
E +P +
Sbjct: 450 EEIPQR 455
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 2/219 (0%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVL 222
+++ R+ + + SW A + G+V+ G E ++ M + G ++PD T +L
Sbjct: 106 ELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLL 165
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
C + +GL + +VLK F+ ++ V N I + CG + A VF + R LV
Sbjct: 166 KGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLV 225
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+WNS+I G G EA++ + M+ E +P+ ++ G +++CS + G + F
Sbjct: 226 TWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLG-KEFHCY 284
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
K + + I ++D+Y + G L A + +NM K
Sbjct: 285 IKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQK 323
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/434 (37%), Positives = 260/434 (59%), Gaps = 5/434 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCA-DFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD 126
++RM +PN T+ L+ C D+ + G IH V K G + + L+
Sbjct: 108 YSRMLHKSVSPNKFTYPPLIRACCIDYAIE---EGKQIHAHVLKFGFGADGFSLNN-LIH 163
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTAL 186
MY F ++ A VFD M + +W ++I GY + G ++ A +F+ MP R+++SW A+
Sbjct: 164 MYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAM 223
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
+ +V+ EA F M++ V D S+L+AC +G L G WIH Y+ K
Sbjct: 224 IAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGI 283
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
+ + K+ T+ID+Y +CGC+E A +VF + ++ + SWN +I G A++G A+E F
Sbjct: 284 ELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKE 343
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M++E PDG++F L+AC+H+GL+E+G YF M ++ + P +EH+GC+VDL RAG
Sbjct: 344 MEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAG 403
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN 426
LE+A ++ MP+ P+ VLG+L+ ACR G+ L E++ K +++L+P YVLLAN
Sbjct: 404 LLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLAN 463
Query: 427 MYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLEL 486
+YA+ G+W+ K+R+ M RG++K PG S IE SG+ EF+AG R+H +++ IY+ L+
Sbjct: 464 LYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDE 523
Query: 487 LSFDLKLCGYVPET 500
+ ++ GYVP+T
Sbjct: 524 ILETIRSIGYVPDT 537
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 44/293 (15%)
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ GD+ A+ +FD++P DA + + G+++ + + M V P+ T
Sbjct: 66 KSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPP 125
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
++ AC + G IH +VLK F + N LI +Y +E AR+VF M +R
Sbjct: 126 LIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRD 185
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+VSW S+I G++ GFV +A E F M + + VS+ + A + + + FD
Sbjct: 186 VVSWTSLITGYSQWGFVDKAREVFELMPER----NSVSWNAMIAAYVQSNRLHEAFALFD 241
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M RLE NVV ++ V S+L+AC G +
Sbjct: 242 RM------------------------RLE---NVV------LDKFVAASMLSACTGLGAL 268
Query: 401 ILAERLMKYL----VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+ + Y+ ++LD + + + +MY G + A ++ + +GI
Sbjct: 269 EQGKWIHGYIEKSGIELDSKLATTVI---DMYCKCGCLEKASEVFNELPQKGI 318
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 124/282 (43%), Gaps = 10/282 (3%)
Query: 105 HGLVCKLGLDRNNVMVGTAL-LDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR-- 161
H + +LGL +N +G + +K G ++ A VFD + ++ +N + GY+R
Sbjct: 40 HSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQ 99
Query: 162 --RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
R I RM + + ++ L+ EE + + G D ++
Sbjct: 100 LARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLN 159
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
++++ N +L R V + +V +LI YS+ G ++ AR+VF+ M +R
Sbjct: 160 NLIHMYVNFQSLEQA----RRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPER 215
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
VSWN++I + + + EA F+ M+ E D L+AC+ G +E G
Sbjct: 216 NSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIH 275
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
++K + + ++D+Y + G LE A V +P K
Sbjct: 276 GYIEK-SGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQK 316
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 164/419 (39%), Positives = 257/419 (61%), Gaps = 5/419 (1%)
Query: 87 LSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRV 146
L+ A P LG +H ++ + GL ++ V +L+ Y GR+ A VFD
Sbjct: 74 LNAAAKIPHLRGTLGPQLHSVIVRAGL-ASDAHVSASLIQTYFSCGRVASARSVFDQTTD 132
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
K F WN MI GY++ G++ A +FD MP R+ +SWT ++ + + EA+E FR M
Sbjct: 133 KDIFCWNVMISGYVKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRM 192
Query: 207 QIS-GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
Q+ G+EPD V ++SVL+AC ++G + +G W+HR+V+++ + + N +ID+Y + GC
Sbjct: 193 QVEEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGC 252
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+ A +VF+ M ++++V+W ++I GFA++G EA+E F M+ E P+ V+F L+A
Sbjct: 253 VRKAVEVFEGMDQKSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSA 312
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
CSH GL + G YF IM YR+ R+EHYGC+VDL RAG L +A ++V++MP K N
Sbjct: 313 CSHVGLTDLGRWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAA 372
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+ G+LLAA RT GD L ++ + +L++L+P NY+LL+N+YA +WD K+R+ MK
Sbjct: 373 IWGALLAAARTHGDAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSKLRKQMK 432
Query: 446 GRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV---PETV 501
RG++ PG SSIE+ +HEF + D SH I +L ++ D+K +V PE +
Sbjct: 433 DRGLRNVPGASSIEVDGMVHEFTSRDGSHPCLHKICKVLCEITTDMKSISFVALLPEAL 491
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 95/241 (39%), Gaps = 24/241 (9%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL---FLG 101
V WT+ I+ G EA F RM + PN +TF+ +LS C+ L +
Sbjct: 268 VVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLGRWYFK 327
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS-SFTWNAMIDGYM 160
M+ K ++ MV D+ + G + A + M K+ + W A++
Sbjct: 328 IMVSQYRIKQRVEHYGCMV-----DLLGRAGYLMEAQDLVQDMPFKANAAIWGALLAAAR 382
Query: 161 RRGDIE---SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GD E A+ E+ ++ ++ L N + ++ +++ + ++M+ G
Sbjct: 383 THGDAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSKLRKQMKDRG------- 435
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNV-KVCNTLIDLYSRCGCIEFARQVFQRM 276
L ++ + +H + + + K+C L ++ + I F + + +
Sbjct: 436 ----LRNVPGASSIEVDGMVHEFTSRDGSHPCLHKICKVLCEITTDMKSISFVALLPEAL 491
Query: 277 H 277
H
Sbjct: 492 H 492
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/477 (37%), Positives = 286/477 (59%), Gaps = 25/477 (5%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFP-SQCLF----- 99
V W + I + ++GRI A F +M + T +++L+ C ++ LF
Sbjct: 147 VSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWN-TVMSMLAQCGRIEEARRLFDRMPE 205
Query: 100 -----LGAMIHGLV-------CKLGLDR---NNVMVGTALLDMYAKFGRMDLATVVFDAM 144
AMI GL +L DR NV+ A++ YA+ R+D A +F+ M
Sbjct: 206 RDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERM 265
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF- 203
+ +WN MI G ++ GD+ A ++F+EMP ++ ISWT ++ G V+ G EEAL+ F
Sbjct: 266 PERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFS 325
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
R + +G +P+ T +SVL AC+N+ LG G +H+ + K ++D+ V + LI++YS+C
Sbjct: 326 RMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKC 385
Query: 264 GCIEFARQVFQR--MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
G + AR++F +R LVSWN II +A +G+ EA+ +F M+K GFKPD V++ G
Sbjct: 386 GELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVG 445
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+ACSHAGL+E+GL+YFD + K + R +HY C+VDL RAGRL++A +E + K
Sbjct: 446 LLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETK 505
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
P+ V G+LLA C ++ + ++ K L++++P Y+LL+N+YA+ GKW A ++R
Sbjct: 506 PSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVR 565
Query: 442 RTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
MK +G++K+PG S IE+G+ +H F+ GD+SH +S+ IYS+L L +K GY P
Sbjct: 566 LKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEP 622
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 184/408 (45%), Gaps = 65/408 (15%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ WT+ IS + + G I EA F R+ N +T+ ++ G ++ +
Sbjct: 84 ITWTTVISGYIKCGMIEEARRLFDRVD---AKKNVVTWTAMVGG---------YIRSNKI 131
Query: 106 GLVCKL--GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
KL + NV+ ++D YA+ GR+D A +F+ M ++ +WN ++ + G
Sbjct: 132 SDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCG 191
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
IE A R+FD MP RD ISWTA++ G K G +EA F M E + V+ +++
Sbjct: 192 RIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMP----ERNVVSWNAMIT 247
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
A L L + + ++D NT+I + G + AR++F M K+ ++S
Sbjct: 248 GYAQNLRLDEALDLFERMPERDLPS----WNTMITGLIQNGDLRRARKLFNEMPKKNVIS 303
Query: 284 WNSIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSH-AGLIEDGLRYFDI 341
W ++I G G EAL+ F+ M G KP+ +F L ACS+ AGL E + I
Sbjct: 304 WTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQII 363
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRL--------------------------------- 368
K +Y+ S + ++++YS+ G L
Sbjct: 364 SKTVYQDSTFV--VSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYG 421
Query: 369 EDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
++A+N + M KP++V LL+AC G L E +KY +L
Sbjct: 422 KEAINFFKEMRKSGFKPDDVTYVGLLSACSHAG---LVEEGLKYFDEL 466
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 169/357 (47%), Gaps = 46/357 (12%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
NV ++ +K GR+ A +FD MR TW +I GY++ G IE A R+FD +
Sbjct: 51 NVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVD 110
Query: 177 V-RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
++ ++WTA++ G+++ +A + F EM V V+ ++++ A G + +
Sbjct: 111 AKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNV----VSWNTMIDGYAQNGRIDSAM 166
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
Y+ ++ + NV NT++ + ++CG IE AR++F RM +R ++SW ++I G + NG
Sbjct: 167 ----YLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNG 222
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM------------- 342
+ EA F+ M + VS+ +T + +++ L F+ M
Sbjct: 223 RIDEARLLFDRMPERNV----VSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMIT 278
Query: 343 -----------KKIYRVSPR--IEHYGCIVDLYSRAGRLEDALNVVENM----PMKPNEV 385
+K++ P+ + + ++ + G E+AL + M KPN+
Sbjct: 279 GLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQG 338
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL--LANMYAAVGKWDGAGKI 440
S+L AC + +++ + ++ DS +V+ L NMY+ G+ A K+
Sbjct: 339 TFVSVLGACSNLAGLGEGQQVHQ-IISKTVYQDSTFVVSALINMYSKCGELGTARKM 394
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/426 (38%), Positives = 260/426 (61%), Gaps = 7/426 (1%)
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLAT 138
++ TF +L + S +++G +HGL+ ++GL + ++ V T+L+ +Y K G ++ A
Sbjct: 133 DYFTFPFVLKSSVELLS--VWMGKCVHGLILRIGL-QFDLYVATSLIILYGKCGEINDAG 189
Query: 139 VVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE 198
VFD M ++ +WNA++ GY + G I++A+ +F+ MP R+ +SWT +++G+ + G ++
Sbjct: 190 KVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQ 249
Query: 199 ALECFREM--QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
AL F EM + SGV P++VTI+SVL ACA + TL G IH + N V L
Sbjct: 250 ALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIAL 309
Query: 257 IDLYSRCGCIEFARQVFQRMHK--RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
+Y++CG + AR F ++++ + L++WN++I +A G +A+ F M + G +P
Sbjct: 310 TAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQP 369
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
D ++FTG L+ CSH+GL++ GL+YF+ M Y ++PR+EHY C+ DL RAGRL +A +
Sbjct: 370 DDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKL 429
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
V MPM + GSLLAACR ++ +AE + L L+P NYVLL+NMYA G+W
Sbjct: 430 VGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRW 489
Query: 435 DGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC 494
K+R +K +G +K PG S IEI H F+ GD SH + + IY LE L +K
Sbjct: 490 QEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAA 549
Query: 495 GYVPET 500
GY P+T
Sbjct: 550 GYFPDT 555
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 99/236 (41%), Gaps = 39/236 (16%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLH--GTNPNHITFITLLSGCADFPSQCLFLGAM 103
V WT+ IS + +SG +A F M G PN +T +++L CA + L G
Sbjct: 232 VSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLST--LERGRQ 289
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM--RVKSSFTWNAMIDGYMR 161
IH L C++GL+ +N V AL MYAK G + A FD + K+ WN MI Y
Sbjct: 290 IHELACRMGLN-SNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYAS 348
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G AV F REM +G++PD +T +
Sbjct: 349 YGHGLQAVSTF-------------------------------REMIQAGIQPDDITFTGL 377
Query: 222 LNACANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
L+ C++ G + +GL + + V+ + DL R G + A ++ M
Sbjct: 378 LSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEM 433
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 187/485 (38%), Positives = 280/485 (57%), Gaps = 20/485 (4%)
Query: 24 NLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITF 83
NL ++ + N +TV W I H +S + + RM PN T+
Sbjct: 81 NLLNAHKVFERIENPSTTV-----WNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTY 135
Query: 84 ITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMD---LATVV 140
L+ GCA S L G +HG V G NV V T+L+++YA G D A V
Sbjct: 136 SFLIGGCA--RSXLLREGEQVHGRVVANGYC-TNVFVRTSLVNLYAIAGGYDGVRKARRV 192
Query: 141 FDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEAL 200
FD + ++ +WN+++ GY+R GD++ A R+FDEMP R+ +SWT ++ G + G ++AL
Sbjct: 193 FDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQAL 252
Query: 201 ECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN----VKVCNTL 256
F EM+ +GV+ D V +++ L+ACA +G L +G WIH Y+ ++ N V + N+L
Sbjct: 253 HLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSL 312
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF---K 313
I +Y+ CG I+ A +VF M +R+ +SW S+I GFA G EAL F MQ+ G +
Sbjct: 313 IHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGR 372
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
PDG++F G L ACSHAG ++ G +F+ M K + + PRIEHYGC+VDL SRAG L++A
Sbjct: 373 PDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHR 432
Query: 374 VVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV-DLDPGVDSNY-VLLANMYAAV 431
+ E+MPMKPN+ V G+LL CR + LA + + LV +L P + Y VLL+N+YA
Sbjct: 433 LXESMPMKPNDAVWGALLGGCRIHKNAELASHVAQKLVLELKPDQAAGYLVLLSNVYATA 492
Query: 432 GKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
+W +R+ M G++K G S ++I +H+F+AGD +H + +Y ML ++
Sbjct: 493 KRWQDVALVRQKMVEIGVRKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEMLSKITRQA 552
Query: 492 KLCGY 496
KL GY
Sbjct: 553 KLEGY 557
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 143/339 (42%), Gaps = 46/339 (13%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH + G + N ++ LL Y G + A VF+ + S+ WN MI G+ +
Sbjct: 53 IHTQIIVNGFSQKNFLL-VKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSE 111
Query: 164 DIESAVRMFDEMPVRDA----ISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
V +++ M +A +++ L+ G + E + + +G +
Sbjct: 112 TPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVANGYCTNVFVRT 171
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
S++N A G G+ R V + N+ N+L+ Y RCG ++ AR++F M +R
Sbjct: 172 SLVNLYAIAGGYD-GVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPER 230
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL--- 336
+VSW ++I G A G +AL F+ M++ G K D V+ AL+AC+ G ++ G
Sbjct: 231 NVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIH 290
Query: 337 RYFD--------------------------IMKKIYRVSPRIEHYGCI-----VDLYSRA 365
Y D ++ K Y+V ++ I + +++
Sbjct: 291 SYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQ 350
Query: 366 GRLEDALNVVENMPM------KPNEVVLGSLLAACRTKG 398
G E+AL V + M +P+ + +L AC G
Sbjct: 351 GHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAG 389
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 105/283 (37%), Gaps = 72/283 (25%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
IH ++ F + L+ Y G + A +VF+R+ + WN +I G + +
Sbjct: 53 IHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSET 112
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY------------------ 338
+ +E +N M + +P+ +++ + C+ + L+ +G +
Sbjct: 113 PHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVANGYCTNVFVRTS 172
Query: 339 ----------FDIMKKIYR-----VSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---- 379
+D ++K R V I + ++ Y R G ++ A + + MP
Sbjct: 173 LVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNV 232
Query: 380 ------------------------------MKPNEVVLGSLLAACRTKGDIILAERLMKY 409
+K ++V L + L+AC GD+ L + Y
Sbjct: 233 VSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSY 292
Query: 410 LVD-LDPGVDSNYVLLAN----MYAAVGKWDGAGKIRRTMKGR 447
+ + L G V L N MYA+ G D A K+ M+ R
Sbjct: 293 IDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQR 335
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 171/456 (37%), Positives = 263/456 (57%), Gaps = 33/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ I+ R+GR EA F M G + +T +++L CA + ++ G +
Sbjct: 169 VVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVL--CAAAMLRDVWFGRWV 226
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + G +V VG+AL+DMY+K G D
Sbjct: 227 HGFYVESGRVIWDVYVGSALVDMYSKCGYCD----------------------------- 257
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
AV++F+EMP R+ +SW AL+ G+V+ ++EAL+ F+EM I G+EP+ T+ S L A
Sbjct: 258 --DAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTA 315
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA +G+L G W+H YV + N K+ L+D+YS+CGC++ A VF+++ + + W
Sbjct: 316 CAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPW 375
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G A+ G +L F+ M + +P+GV+F G L+AC+H GL+++GL F +M
Sbjct: 376 TAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMIC 435
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
YR+ P ++HYGC+VDL RAGRLE+A+ +E+MPM+P V G+L + C L E
Sbjct: 436 DYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGE 495
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ +L+ L P Y+LLAN+Y+ KW+ A +RR MKG+G+ K P S IE+ I
Sbjct: 496 HIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPACSWIEVNGVI 555
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF+A D+SHIES ++Y ML ++ LKL Y ++
Sbjct: 556 HEFIAFDKSHIESINVYMMLGSVTAQLKLATYALDS 591
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 207/458 (45%), Gaps = 79/458 (17%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + + S + + ++R+ HG P+ TF LL + ++ F +
Sbjct: 72 WNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPF---QFYAH 128
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ K GLD FDA F N+++ + G ++
Sbjct: 129 IVKFGLD--------------------------FDA------FVQNSLVSAFAHCGYVDC 156
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+ R+F E +D +SWTAL+NG ++ G EALECF EM+ SGVE D VT++SVL A A
Sbjct: 157 SRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAM 216
Query: 228 VGTLGIGLWIHR-YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ + G W+H YV +V V + L+D+YS+CG + A +VF M R LVSW +
Sbjct: 217 LRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGA 276
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I G+ EAL+ F M EG +P+ + T ALTAC+ G ++ G R+
Sbjct: 277 LIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQG-RWLHEYVDRS 335
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK------------------------- 381
++ + +VD+YS+ G +++AL V E +P K
Sbjct: 336 KLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLF 395
Query: 382 ---------PNEVVLGSLLAACRTKGDIILAERLMKYLV---DLDPGVDSNYVLLANMYA 429
PN V +L+AC G + L + ++ L+P VD +Y + ++
Sbjct: 396 SQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVD-HYGCMVDLLG 454
Query: 430 AVGKWDGAGKIRRTMKGRGIQKKPGL-SSIEIGSGIHE 466
G+ + A K +M ++ PG+ ++ G IH+
Sbjct: 455 RAGRLEEAIKFIESMP---MEPTPGVWGALFSGCMIHK 489
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+ + +FD + W ++ F + L + ++ GV PD T +L
Sbjct: 53 DLGYTLLLFDRLATPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLK 112
Query: 224 ACANVGTLG-IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
A + + + H DF V+ N+L+ ++ CG ++ +R++F K+ +V
Sbjct: 113 AFSKLRNENPFQFYAHIVKFGLDFDAFVQ--NSLVSAFAHCGYVDCSRRLFIETAKKDVV 170
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SW ++I G NG EALE F M+ G + D V+ L A + + G
Sbjct: 171 SWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFY 230
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
+ RV + +VD+YS+ G +DA+ V MP + N V G+L+A
Sbjct: 231 VESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTR-NLVSWGALIA 279
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 259/421 (61%), Gaps = 7/421 (1%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL-- 98
V V W S I + + R + F M G + +T I ++S C +
Sbjct: 149 VVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMAD 208
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
++ I ++ +V +G L+D + + G++ A VF M+V++ T NAMI
Sbjct: 209 YMVRYIEDYCIEV-----DVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAA 263
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + DI SA ++FD++P +D ISW+++++G+ + +F +ALE FR+MQ + V+PD + I
Sbjct: 264 YAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVI 323
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
SV+++CA++G L +G W+H YV + + K + + N+LID+Y +CG + A QVF+ M +
Sbjct: 324 ASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKE 383
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +SWNSII+G A NGF E+L F +M EGF+P+GV+F G L AC++A L+E+GL +
Sbjct: 384 KDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDH 443
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F+ MK++Y + P+++HYGC+VDL RAG+LE AL + MP+ P+ VV LL +C T G
Sbjct: 444 FESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHG 503
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
D+ +AE + K L +L+P NY LL+N YA+ +W A +R+ M ++K PG S++
Sbjct: 504 DVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAV 563
Query: 459 E 459
E
Sbjct: 564 E 564
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 170/379 (44%), Gaps = 70/379 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W I +S A+A + + G P+++TF +L CA + L G +
Sbjct: 52 TFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINA--LNEGEQM 109
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + KLGL +++ V +L+ +YA G + A VFD M VK +WN++I GY +
Sbjct: 110 HNHITKLGL-LSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNR 168
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
F++ L F+ MQ GV+ D VT+I V++A
Sbjct: 169 -------------------------------FKDILALFKLMQNEGVKADKVTMIKVVSA 197
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE----------------- 267
C +G + ++ RY+ + +V + NTL+D + R G ++
Sbjct: 198 CTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTM 257
Query: 268 --------------FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
AR++F ++ K+ L+SW+S+I G++ +ALE F MQ+ K
Sbjct: 258 NAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVK 317
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
PD + +++C+H G ++ G + +++ + I ++D+Y + G ++AL
Sbjct: 318 PDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIME-NSLIDMYMKCGSAKEALQ 376
Query: 374 VVENMPMKP----NEVVLG 388
V + M K N +++G
Sbjct: 377 VFKEMKEKDTLSWNSIIIG 395
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 175/363 (48%), Gaps = 30/363 (8%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+ A ++FD++ W L+ G + +A+ +++ Q G+ PD +T +L
Sbjct: 36 DLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILK 95
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA + L G +H ++ K ++ V N+LI LY+ CG + +AR VF M + +VS
Sbjct: 96 ACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVS 155
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG---LIEDGLRYFD 340
WNS+I G++ + L F MQ EG K D V+ ++AC+ G + + +RY +
Sbjct: 156 WNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIE 215
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
Y + + +VD + R G+L+ A V NM ++ N V + +++AA DI
Sbjct: 216 ----DYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVR-NIVTMNAMIAAYAKGQDI 270
Query: 401 ILAERLMKYLVDLDPGVD-SNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK------- 452
+ A ++ D P D ++ + + Y+ + A +I R M+ ++
Sbjct: 271 VSARKIF----DQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASV 326
Query: 453 ----PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET--VAGELY 506
L ++++G +HE++ R++I+++ I L+ +K CG E V E+
Sbjct: 327 VSSCAHLGALDLGKWVHEYVR--RNNIKADTIMEN-SLIDMYMK-CGSAKEALQVFKEMK 382
Query: 507 END 509
E D
Sbjct: 383 EKD 385
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 179/437 (40%), Positives = 260/437 (59%), Gaps = 25/437 (5%)
Query: 77 NPNHITFITLLSGCA--DFPSQC-LFLGAMI----------HGLVCKLGLDRNNVMVGTA 123
NPN T+ T++ G A D PS LF M+ + + K NV G A
Sbjct: 80 NPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEA 139
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
+ + + G L F N+++ Y GD ESA ++F+ M RD ++W
Sbjct: 140 IHSVTIRNGFESLV------------FVQNSLLHIYAACGDTESAYKVFELMKERDLVAW 187
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
+++NGF G EAL FREM + GVEPD T++S+L+A A +G L +G +H Y+LK
Sbjct: 188 NSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLK 247
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
N V N+L+DLY++CG I A++VF M +R VSW S+IVG AVNGF EALE
Sbjct: 248 VGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALEL 307
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F M+ +G P ++F G L ACSH G++++G YF MK+ + PRIEHYGC+VDL S
Sbjct: 308 FKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLS 367
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
RAG ++ A ++NMP++PN V+ +LL AC G + L E +L++L+P +YVL
Sbjct: 368 RAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVL 427
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSM 483
L+N+YA+ +W IRR+M G++K PG S +E+G+ ++EF GDRSH +S+ +Y++
Sbjct: 428 LSNLYASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAL 487
Query: 484 LELLSFDLKLCGYVPET 500
LE ++ LKL GYVP T
Sbjct: 488 LEKITELLKLEGYVPHT 504
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 141/316 (44%), Gaps = 38/316 (12%)
Query: 84 ITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALL-DMYAKFGRMDLATVVFD 142
I+LL CA + IH + G+ NN +G L+ + + M A VF
Sbjct: 21 ISLLQFCASSKHKL----KQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFT 76
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
+ + FTWN +I GY D S +F
Sbjct: 77 VIHNPNVFTWNTIIRGYAE-SDNPSPAFLF------------------------------ 105
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
+R+M +S VEPD T +L A + + G IH ++ F+ V V N+L+ +Y+
Sbjct: 106 YRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAA 165
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
CG E A +VF+ M +R LV+WNS+I GFA+NG EAL F M EG +PDG +
Sbjct: 166 CGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSL 225
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP 382
L+A + G +E G R + K+ +S ++DLY++ G + +A V M +
Sbjct: 226 LSASAELGALELGRRVHVYLLKV-GLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSER- 283
Query: 383 NEVVLGSLLAACRTKG 398
N V SL+ G
Sbjct: 284 NAVSWTSLIVGLAVNG 299
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 36/255 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ +GR EA F M++ G P+ T ++LLS A+ + L LG +H
Sbjct: 185 VAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGA--LELGRRVH 242
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K+GL +N+ V +LLD+YAK G + A VF M +++ +W ++I G
Sbjct: 243 VYLLKVGLSKNS-HVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLA----- 296
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+NGF EEALE F+EM+ G+ P +T + VL AC
Sbjct: 297 ---------------------VNGF-----GEEALELFKEMEGQGLVPSEITFVGVLYAC 330
Query: 226 ANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVS 283
++ G L G R + ++ ++ ++DL SR G ++ A + Q M + V
Sbjct: 331 SHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVI 390
Query: 284 WNSIIVGFAVNGFVG 298
W +++ ++G +G
Sbjct: 391 WRTLLGACTIHGHLG 405
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 267/455 (58%), Gaps = 36/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S IS + + EA F M G PN ++ +++L C + L LG +
Sbjct: 194 VSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGD--LKLGTWVE 251
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + + N M G+AL+ MY K G D+
Sbjct: 252 EFVVENKMTLNYFM-GSALIHMYGKCG-------------------------------DL 279
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
SA R+FD M +D ++W A++ G+ + G EEA++ F++M++S PD +T+I +L+AC
Sbjct: 280 VSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSAC 339
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++G L +G + Y ++ F+D+V V L+D+Y++CG ++ A +VF M K+ VSWN
Sbjct: 340 ASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWN 399
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEG--FKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
++I A +G EAL F SM EG P+ ++F G L+AC HAGL+++G R F +M
Sbjct: 400 AMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMS 459
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ + P+IEHY C+VDL+SRAG LE+A + V MP KP+EV+LG+LL AC+ + +I ++
Sbjct: 460 SSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDIS 519
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
ER+MK L++L+P NYV+ + +YA + +WD + ++R MK +G+ K PG S I+I S
Sbjct: 520 ERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQ 579
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+HEF AGD H E I+ +L+LL DL+ GY+P
Sbjct: 580 LHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIP 614
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 187/367 (50%), Gaps = 37/367 (10%)
Query: 65 ALEF-TRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTA 123
ALEF +RM G PN++T+ L C++ + + G M H V + GLD + V +
Sbjct: 111 ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLA--VENGRMGHCSVIRRGLDEDG-HVSHS 167
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
L+ MYA+ G+M GD A ++FDE+ +D +SW
Sbjct: 168 LITMYARCGKM----------------------------GD---ARKVFDEISQKDLVSW 196
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
++++G+ K + EA+ FREM +G +P+ ++++SVL AC +G L +G W+ +V++
Sbjct: 197 NSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVE 256
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
N + + LI +Y +CG + AR++F M K+ V+WN++I G+A NG EA++
Sbjct: 257 NKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKL 316
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F M+ PD ++ G L+AC+ G ++ G + +I + +VD+Y+
Sbjct: 317 FQDMRMSSTAPDQITLIGILSACASIGALDLG-KQVEIYASERGFQDDVYVGTALVDMYA 375
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
+ G L++A V MP K NEV ++++A G A L K +++ V N +
Sbjct: 376 KCGSLDNAFRVFYGMP-KKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDIT 434
Query: 424 LANMYAA 430
+ +A
Sbjct: 435 FVGVLSA 441
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 139/282 (49%), Gaps = 46/282 (16%)
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
ALE + M+ G++P+ +T + AC+N+ + G H V+++ ++ V ++LI
Sbjct: 111 ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLIT 170
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
+Y+RCG + AR+VF + ++ LVSWNS+I G++ GEA+ F M + GF+P+ +S
Sbjct: 171 MYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMS 230
Query: 319 FTGALTACSHAG-----------LIEDGL------------------------RYFDIMK 343
L AC G ++E+ + R FD MK
Sbjct: 231 LVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK 290
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK---PNEVVLGSLLAACRTKGDI 400
K +V+ + ++ Y++ G E+A+ + ++M M P+++ L +L+AC + G +
Sbjct: 291 KKDKVT-----WNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGAL 345
Query: 401 ILAERLMKYLVDLDPGVDSNYV--LLANMYAAVGKWDGAGKI 440
L +++ Y + D YV L +MYA G D A ++
Sbjct: 346 DLGKQVEIYASE-RGFQDDVYVGTALVDMYAKCGSLDNAFRV 386
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 178/469 (37%), Positives = 285/469 (60%), Gaps = 11/469 (2%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA--DFPSQ 96
+S V V + + I + + A F M G P+ TF+ L S C+ + P+
Sbjct: 171 ESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPN- 229
Query: 97 CLFLGAMIHGLVCK-LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRV-KSSFTWNA 154
+G IH V K L +N+++ +A++DMYAK G +++A VF M KS+ W++
Sbjct: 230 ---VGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSS 286
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
M+ GY R G+I A ++F+ M RD ISWTA+++G+ + G EALE F+EM+ G++PD
Sbjct: 287 MVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPD 346
Query: 215 YVTIISVLNACANVGTLGIGLWI-HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
VT+++VL+ACA +G +G + H+Y+ F N + ++D+Y++CG I+ A ++F
Sbjct: 347 EVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIF 406
Query: 274 QRMHK--RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
+R+ K +T +NS+I G A +G A+ F + G KPD V+F G L AC H+GL
Sbjct: 407 RRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGL 466
Query: 332 IEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLL 391
IE+G + F+ M Y + P++EHYGC+VDL R G LE+A ++V+ MP + N V+ +LL
Sbjct: 467 IEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALL 526
Query: 392 AACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQK 451
+ACRT G++ + E + L++++ + YVLL+N+ A +W+ A ++R+ M+ GI+K
Sbjct: 527 SACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRK 586
Query: 452 KPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
PG S IE+G IH F+A D+SH + + I ML+ ++ LK GYVP T
Sbjct: 587 PPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNT 635
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 163/364 (44%), Gaps = 73/364 (20%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHG-TNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
W + I + RS EA + + M G PN+ TF LL+ CA S L G +H
Sbjct: 78 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSS--LEPGHEVHS 135
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
+ K G + +++ V AL+ +Y+ FG ++LA +FD V+ ++N MI GY E
Sbjct: 136 HIIKHGFE-SDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPE 194
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
SA+ +F EMQ SG+ PD T +++ + C+
Sbjct: 195 SALCLFG-------------------------------EMQNSGILPDEFTFVALFSVCS 223
Query: 227 NVGTLGIGLWIHRYVLK--QDFKDNVKVCNTLIDL------------------------- 259
+ +G IH V K + N+ + + ++D+
Sbjct: 224 VLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAA 283
Query: 260 -------YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
Y+RCG I AR++F MH+R ++SW ++I G++ G EALE F M+ G
Sbjct: 284 WSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGI 343
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFD--IMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
KPD V+ L+AC+ G + G R + I ++ + + ++D+Y++ G ++
Sbjct: 344 KPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILT--AAVMDMYAKCGSIDS 401
Query: 371 ALNV 374
AL +
Sbjct: 402 ALEI 405
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 143/313 (45%), Gaps = 11/313 (3%)
Query: 140 VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
+F R+ S F+ DG ++ + +F ++ + W ++ G+ + EA
Sbjct: 41 IFSISRLISFFSLLGSKDG------LDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREA 94
Query: 200 LECFREMQISGVEP-DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
+ + M G+ P + T +LN+CA + +L G +H +++K F+ ++ V N LI
Sbjct: 95 IVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIH 154
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
LYS G + AR +F R LVS+N++I G+A AL F MQ G PD +
Sbjct: 155 LYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFT 214
Query: 319 FTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
F + CS G + + + K + + I IVD+Y++ G + A V
Sbjct: 215 FVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFST 274
Query: 378 MPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGA 437
M + S++ G+I +A +L ++ + D ++ + + Y+ G+ A
Sbjct: 275 MGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDV---ISWTAMISGYSQAGQCSEA 331
Query: 438 GKIRRTMKGRGIQ 450
++ + M+ GI+
Sbjct: 332 LELFKEMEALGIK 344
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 164/386 (42%), Positives = 247/386 (63%), Gaps = 2/386 (0%)
Query: 114 DRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
+R+ V T +LD + K G MD A +F+ M + +W+ M+ GY + GD++ A +FD
Sbjct: 218 ERDRVSWNT-MLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFD 276
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI 233
PV++ + WT +++G+ ++G +EA+ EM+ SG+ D IS+L ACA G LG+
Sbjct: 277 RCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGL 336
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSWNSIIVGFA 292
G +H L+ F+ + KV N+ ID+Y++CGC++ A +VF M ++ LVSWNS+I GF
Sbjct: 337 GKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFG 396
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
++G +++E FN+M +EGFKPD +F G L AC+HAGL+ +G YF M+++Y + P+I
Sbjct: 397 IHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQI 456
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD 412
EHYGC+VDL R G L++A +V +MP +PN ++LG+LL ACR D+ LA + KYL
Sbjct: 457 EHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLFK 516
Query: 413 LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDR 472
L P N+ LL+N+YA G W K+R+ M G QK G+SSIE+ +HEF D
Sbjct: 517 LVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTVRDW 576
Query: 473 SHIESEHIYSMLELLSFDLKLCGYVP 498
SH +S IY+M++ L DL+ GYVP
Sbjct: 577 SHPKSGDIYNMIDRLVHDLRQVGYVP 602
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 166/431 (38%), Positives = 259/431 (60%), Gaps = 31/431 (7%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATV--------------------- 139
A +H K G ++ V TAL++ YAK GR DLA
Sbjct: 58 AASLHARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYV 117
Query: 140 ----------VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
VFD MR + +WN MI GY G+++ A +F+ M RDA SW+++++
Sbjct: 118 TRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSA 177
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
+ K ++ALE +REM+ + V PD T++SVL+AC+++G L +G +H++V + +
Sbjct: 178 YTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELD 237
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
VK+ LID+Y++CG IE + +VF M + +++W+S+I+G A +GF +AL F+ M
Sbjct: 238 VKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLS 297
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
EG +P+ V+F G L +C+H GL+ DG +YF M ++ V+P+++HYGC+VDL R+G +E
Sbjct: 298 EGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIE 357
Query: 370 DALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYA 429
+A ++ +MP +P+ V+ +LL ACR ++ +AE M L LDP D +YVLL+N+YA
Sbjct: 358 EAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYA 417
Query: 430 AVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSF 489
W+G ++RRT++ IQ+ PG SSIE + IHEF++GDRSH S+ IY ML +
Sbjct: 418 QANSWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIYKMLGEMMD 477
Query: 490 DLKLCGYVPET 500
L+ GY P T
Sbjct: 478 RLRQAGYKPMT 488
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 139/325 (42%), Gaps = 75/325 (23%)
Query: 48 WTSSISRHCRSGRIAEAALEFTR-MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
W+S +S + + GR ++ ALE R M NP+ T +++LS C+D + L +GA +H
Sbjct: 171 WSSMMSAYTK-GRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGA--LAVGAEVHQ 227
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
V G++ +V +GTAL+DMYAK G ++ + VF +M VK TW++MI
Sbjct: 228 FVESNGVEL-DVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMI---------- 276
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
G G+ +AL F M G++P+ VT I VL +C
Sbjct: 277 ---------------------IGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCT 315
Query: 227 NVGTLGIG-LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++G + G + + V+ ++DL R G IE A+Q+ + M
Sbjct: 316 HLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDM--------- 366
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
F+PD V + L AC +E + M K+
Sbjct: 367 -------------------------PFEPDAVIWRALLGACRIYKNVEVA---EEAMAKL 398
Query: 346 YRVSPRIE-HYGCIVDLYSRAGRLE 369
+ P + HY + ++Y++A E
Sbjct: 399 RVLDPHADGHYVLLSNIYAQANSWE 423
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 166/408 (40%), Positives = 253/408 (62%), Gaps = 11/408 (2%)
Query: 102 AMIHGLV--------CKL--GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT 151
+MI GLV CKL + +++ +LD YAK G MD A +F+ M ++ +
Sbjct: 193 SMIGGLVRCGELEGACKLFDEMPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVS 252
Query: 152 WNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV 211
W+ M+ GY + GD++ A +FD P ++ + WT ++ G+ ++G+ EA E + +M+ +G+
Sbjct: 253 WSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGL 312
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
PD +IS+L ACA G LG+G IH + + F+ KV N ID+Y++CGC++ A
Sbjct: 313 RPDDGFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFD 372
Query: 272 VFQ-RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
VF M K+ +VSWNS+I GFA++G +ALE F+ M EGF+PD +F G L AC+HAG
Sbjct: 373 VFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAG 432
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
L+ +G +YF M+K+Y + P++EHYGC++DL R G L++A ++ +MPM+PN ++LG+L
Sbjct: 433 LVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTL 492
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
L ACR D+ A + + L ++P NY LL+N+YA G W +R M G Q
Sbjct: 493 LNACRMHNDVDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQ 552
Query: 451 KKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
K G SSIE+ +HEF D+SH +S+ IY M++ L DL+ GYVP
Sbjct: 553 KPSGASSIEVEEEVHEFTVFDQSHPKSDDIYKMIDRLVQDLRQVGYVP 600
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 181/396 (45%), Gaps = 59/396 (14%)
Query: 18 QQNPNQNLTTTPQI----------SIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALE 67
+ N +Q+L P++ + N +P V +SI R + + +L
Sbjct: 46 KANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIR-AHAHNTSHPSLP 104
Query: 68 FT---RMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTAL 124
F +M +G P++ T+ LL C PS L L MIH V K G ++ V +L
Sbjct: 105 FNAFFQMQKNGLFPDNFTYPFLLKACTG-PSS-LPLVRMIHAHVEKFGF-YGDIFVPNSL 161
Query: 125 LDMYAKFGR--MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
+D Y++ G +D A +F AM+ + TWN+MI G +R G++E A ++FDEMP RD +S
Sbjct: 162 IDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPERDMVS 221
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
W +L+G+ K G + A E F M
Sbjct: 222 WNTMLDGYAKAGEMDRAFELFERMP----------------------------------- 246
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
+ N+ +T++ YS+ G ++ AR +F R + +V W +II G+A GFV EA E
Sbjct: 247 ----QRNIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATE 302
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
+ M++ G +PD L AC+ +G++ G R M++ +R + +D+Y
Sbjct: 303 LYGKMEEAGLRPDDGFLISILAACAESGMLGLGKRIHASMRR-WRFRCGTKVLNAFIDMY 361
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
++ G L+ A +V M K + V S++ G
Sbjct: 362 AKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHG 397
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 25/238 (10%)
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+ C+N+ ++ IH VLK + ++ V LI +S C + A VF + +
Sbjct: 28 LHKCSNLDSVN---QIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNV 84
Query: 282 VSWNSIIVGFAVN-GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+NSII A N F MQK G PD ++ L AC+ G
Sbjct: 85 HLYNSIIRAHAHNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACT-------GPSSLP 137
Query: 341 IMKKIYRVSPRIEHYG------CIVDLYSRAGR--LEDALNVVENMPMKPNEVVL-GSLL 391
+++ I+ + YG ++D YSR G L+ A+++ + MK +VV S++
Sbjct: 138 LVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLF--LAMKERDVVTWNSMI 195
Query: 392 AACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
G++ A +L + + D V N +L + YA G+ D A ++ M R I
Sbjct: 196 GGLVRCGELEGACKLFDEMPERD-MVSWNTML--DGYAKAGEMDRAFELFERMPQRNI 250
>gi|413938708|gb|AFW73259.1| hypothetical protein ZEAMMB73_606431 [Zea mays]
Length = 488
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 178/481 (37%), Positives = 277/481 (57%), Gaps = 15/481 (3%)
Query: 31 ISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRM------TLHGTNPNHITFI 84
+S T+ + P+ T++ + CR+ +A+L R LH TNP +
Sbjct: 9 LSPSTSGFPPSPLPSKAATNATAPRCRAAPSGDASLCAFRAHHSAGHALH-TNP---ALM 64
Query: 85 TLLSGCADFPSQCLFLGAMIHGLVCKLGLDR--NNVMVGTALLDMYAKFGRMDLATVVFD 142
L+ CA PS + IH L+ K G R ++V T+L+ YA+ GR+ A VFD
Sbjct: 65 PALAACARLPS-AVAEAEQIHALLVKSGGSRAVSHVQAFTSLIRAYARLGRVCDARKVFD 123
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
M ++ TWN ++D +R GD+++A +F +MP R+A+SW +++GF + G+ A++
Sbjct: 124 GMADRTVVTWNVLLDALIRDGDLDAAWEVFVKMPQRNAVSWNTIISGFARNGWAPVAVDL 183
Query: 203 FREMQIS-GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
F EM ++ G+ PD T++ ++A ++G L IG H YVL+++F + + L+ +Y+
Sbjct: 184 FIEMTVAYGLAPDEATMVGFVSAVRDIGLLAIGKSAHGYVLRREFSLDGPLGVALVSMYT 243
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
RCG + A F + + + W S+I GFA +G AL F M++ G +P+GV+F
Sbjct: 244 RCGSMGAAHSCFLSVTTKNVEHWTSLIAGFAAHGQPENALRLFVEMRQVGIEPNGVTFVA 303
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+ACSH GL+++G +YFD+M+ + + P I+HYGC+VDL RAG L++A N+ N+P
Sbjct: 304 VLSACSHGGLVDEGFKYFDLMRSM-GIRPMIQHYGCLVDLLGRAGFLKEAFNLASNLPED 362
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
P V+ SLLAACR+ G++ +AE L + P S+YVLL+N YA +W+ + + R
Sbjct: 363 PGFVIWSSLLAACRSHGNVEMAELTASKLAEAKPSHGSSYVLLSNTYARAEQWEDSKRTR 422
Query: 442 RTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
R M+ + KKPGLS IEI +H F D+ HIESE IY MLE L + Y PE
Sbjct: 423 RRMEEHRVAKKPGLSWIEIDGSVHSFATADKLHIESEGIYHMLEDLKHNFTSAAYEPEPF 482
Query: 502 A 502
A
Sbjct: 483 A 483
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 187/521 (35%), Positives = 285/521 (54%), Gaps = 67/521 (12%)
Query: 44 PT-VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
PT V W I + + R +A F ++ L P+ T +L GCA + L G
Sbjct: 78 PTLVSWNLLIKCYIENQRSNDAIALFCKL-LCDFVPDSFTLPCVLKGCARLGA--LQEGK 134
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
IHGLV K+G + ++ ++L+ MY+K G ++L VFD M K +WN++IDGY R
Sbjct: 135 QIHGLVLKIGFGVDKFVL-SSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARC 193
Query: 163 GDIESAVRMFDEMP-------------------------------VRDAISWTALLNGFV 191
G+IE A+ MF+EMP +R+++SW A++NG++
Sbjct: 194 GEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYM 253
Query: 192 KRG-------------------------------YFEEALECFREMQISGVEPDYVTIIS 220
K G F +AL+ F M + P+Y TI+
Sbjct: 254 KAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILG 313
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
++A + + +LG G W+H Y++K FK + + LI++YS+CG ++ A +VF+ + K+
Sbjct: 314 AVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKK 373
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
L W S+IVG ++G V + LE F+ M + G KP ++F G L ACSHAG ED RYF
Sbjct: 374 LGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFK 433
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+M Y + P IEHYGC++D+ RAG LE+A + +E MP+K N+V+ SLL+ R G+I
Sbjct: 434 MMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNI 493
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+ E ++L+DL P YV+L+NMYAA G W+ ++R MK +G++K PG SSIE
Sbjct: 494 RMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEH 553
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
IHEF+ GD+SH ++E IY L + L + G++P+T
Sbjct: 554 QGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTT 594
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 148/344 (43%), Gaps = 54/344 (15%)
Query: 116 NNVMVGTALLDMYA--KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
N+ V + LL +YA + + A +FD ++ + +WN +I Y+ A+ +F
Sbjct: 45 NHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALF- 103
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI 233
LL FV PD T+ VL CA +G L
Sbjct: 104 ----------CKLLCDFV---------------------PDSFTLPCVLKGCARLGALQE 132
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV 293
G IH VLK F + V ++L+ +YS+CG IE R+VF RM + +VSWNS+I G+A
Sbjct: 133 GKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYAR 192
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE 353
G + ALE F M ++ D S+T + S +G +E FD M VS
Sbjct: 193 CGEIELALEMFEEMPEK----DSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVS---- 244
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
+ +++ Y +AG A + + MP + + V S++ A +L + ++
Sbjct: 245 -WNAMINGYMKAGDSNTAKELFDQMPER-SLVTWNSMITGYERNKQFTKALKLFEVMLRE 302
Query: 414 DPGVDSNYVLLANMYAA--------VGKWDGAGKIRRTMKGRGI 449
D + NY + +A G+W + ++ K G+
Sbjct: 303 D--ISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGV 344
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 124/276 (44%), Gaps = 22/276 (7%)
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS--RCGCIEFARQVFQRMHKRTLVSW 284
N GT +H +K ++ V + L+ LY+ R +++A +F + + TLVSW
Sbjct: 24 NCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSW 83
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N +I + N +A+ F + + F PD + L C+ G +++G + ++ K
Sbjct: 84 NLLIKCYIENQRSNDAIALFCKLLCD-FVPDSFTLPCVLKGCARLGALQEGKQIHGLVLK 142
Query: 345 I-YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
I + V + +V +YS+ G +E V + M K + V SL+ G+I LA
Sbjct: 143 IGFGVDKFV--LSSLVSMYSKCGEIELCRKVFDRMEDK-DVVSWNSLIDGYARCGEIELA 199
Query: 404 ERLMKYLVDLDPGVDS-NYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
+ + + P DS ++ +L + + GK + A + + P +S+ +
Sbjct: 200 LEMFEEM----PEKDSFSWTILIDGLSKSGKLEAARDV--------FDRMPIRNSVSWNA 247
Query: 463 GIHEFMAGDRSHIESEHIYSMLE--LLSFDLKLCGY 496
I+ +M S+ E M E L++++ + GY
Sbjct: 248 MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGY 283
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 167/461 (36%), Positives = 274/461 (59%), Gaps = 12/461 (2%)
Query: 46 VQWTSSISRHCRSG-----RIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
+ W++ I+ + +SG I E RM G PN +TF+++L C + L
Sbjct: 325 ISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGA--LEQ 382
Query: 101 GAMIHGLVCKLG--LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G IH + K+G LDR+ + TA+ +MYAK G + A VF M K+ W + +
Sbjct: 383 GRQIHAELSKVGFELDRS---LQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSM 439
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y++ GD+ SA ++F EMP R+ +SW ++ G+ + G + E M+ G +PD VT+
Sbjct: 440 YIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTV 499
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
I++L AC + L G +H +K + + V +LI +YS+CG + AR VF +M
Sbjct: 500 ITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSN 559
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R V+WN+++ G+ +G EA++ F M KE P+ ++ T ++ACS AGL+++G
Sbjct: 560 RDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREI 619
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F +M++ ++++PR +HYGC+VDL RAGRL++A +++MP +P+ V +LL AC++
Sbjct: 620 FRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHN 679
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ LAER ++++L+P S Y+ L+N+YA G+WD + K+RR M RG++K G SSI
Sbjct: 680 NVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSI 739
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
EI IH F+A D +H E + I++ LE L+ ++K GY P+
Sbjct: 740 EIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPD 780
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 203/418 (48%), Gaps = 46/418 (11%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+ T+ V W+S I+ + + A+A F RMT PN ITF+++L C ++ L
Sbjct: 116 RMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYS--IL 173
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G IH +V +G++ +V V TAL+ MY+K G
Sbjct: 174 EKGRKIHTIVKAMGME-TDVAVATALITMYSKCG-------------------------- 206
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+I A +F +M R+ +SWTA++ + EA E + +M +G+ P+ VT
Sbjct: 207 -----EISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTF 261
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+S+LN+C L G IH ++ ++ + ++ V N LI +Y +C ++ AR++F RM K
Sbjct: 262 VSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSK 321
Query: 279 RTLVSWNSIIVGFAVNGF-----VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
R ++SW+++I G+A +G+ + E + M++EG P+ V+F L AC+ G +E
Sbjct: 322 RDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALE 381
Query: 334 DGLRYFDIMKKI-YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
G + + K+ + + ++ I ++Y++ G + +A V M K N V S L+
Sbjct: 382 QGRQIHAELSKVGFELDRSLQ--TAIFNMYAKCGSIYEAEQVFSKMANK-NVVAWTSFLS 438
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
GD+ AE++ + + ++ L+ YA G ++ +MK G Q
Sbjct: 439 MYIKCGDLSSAEKVFSEMPTRNV---VSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQ 493
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 220/495 (44%), Gaps = 85/495 (17%)
Query: 44 PTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
PT + R C++GR+ EA + G N T+ ++ CA ++ G M
Sbjct: 20 PTSVSGGEVWRLCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCA--KARRFEDGKM 77
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H + +LG++ ++ +G +L++ Y+KF
Sbjct: 78 VHKQLDELGVE-IDIYLGNSLINFYSKFE------------------------------- 105
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+ SA ++F M +RD ++W++++ + + +A + F M + +EP+ +T +S+L
Sbjct: 106 DVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILK 165
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
AC N L G IH V + +V V LI +YS+CG I A +VF +M +R +VS
Sbjct: 166 ACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVS 225
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLI 332
W +II A + + EA E + M + G P+ V+F L +C+ H+ +
Sbjct: 226 WTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHIS 285
Query: 333 EDGLRYFDIM-----------------KKIY-RVSPR-IEHYGCIVDLYSRAG-----RL 368
E GL I+ ++I+ R+S R + + ++ Y+++G +
Sbjct: 286 ERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESI 345
Query: 369 EDALNVVENMPMK---PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD-SNYVLL 424
++ ++E M + PN+V S+L AC G + ++ L + +D S +
Sbjct: 346 DEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAI 405
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
NMYA G A ++ M + + S+ I GD S +E ++S +
Sbjct: 406 FNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIK-------CGDLS--SAEKVFSEM 456
Query: 485 ---ELLSFDLKLCGY 496
++S++L + GY
Sbjct: 457 PTRNVVSWNLMIAGY 471
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 171/431 (39%), Positives = 259/431 (60%), Gaps = 5/431 (1%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPSQCLFLG 101
NP ++I R + EAAL LH + P+ TF L C F + G
Sbjct: 70 NPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSG--VEEG 127
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHG V K GL +++ + L+ +YA G ++ A + D M + +WNA++ Y
Sbjct: 128 RQIHGHVLKTGLG-DDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAE 186
Query: 162 RGDIESAVR-MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
RG +E A R +F E PV++ +SW A++ G+ G F E L F +MQ +GV+PD T++S
Sbjct: 187 RGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVS 246
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VL+ACA+VG L G W+H Y+ K + V L+D+YS+CG IE A +VF ++
Sbjct: 247 VLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKD 306
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+ +WNSII G + +G AL+ F+ M EGFKP+ V+F L+ACS AGL+++G F+
Sbjct: 307 ISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFN 366
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+M ++ + P IEHYGC+VDL R G LE+A +V+ MP K VV SLL ACR G++
Sbjct: 367 LMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNV 426
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
LAER+ + L++L P S++V L+NMYA++G+W ++R+ M+ +G++K PG S IE+
Sbjct: 427 ELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEV 486
Query: 461 GSGIHEFMAGD 471
++EF+AG+
Sbjct: 487 DGTVYEFLAGE 497
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 160/399 (40%), Gaps = 85/399 (21%)
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
+ L +A + L F A R+ +S + N+ I A +F +P ++
Sbjct: 21 SELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQA------IPYAHSIFSRIPNPNSY 74
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
W ++ + E AL F +M + V PD T L +C + + G IH +V
Sbjct: 75 MWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHV 134
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR---------------------- 279
LK D++ + NTLI LY+ CGCIE AR + RM +R
Sbjct: 135 LKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELAS 194
Query: 280 ----------TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
+VSWN++I G++ G E L F MQ G KPD + L+AC+H
Sbjct: 195 RRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHV 254
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENM--------- 378
G + G + I + I+ + +VD+YS+ G +E AL V +
Sbjct: 255 GALSQGEW---VHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWN 311
Query: 379 -------------------------PMKPNEVVLGSLLAACRTKGDIILAE-----RLMK 408
KPNEV +L+AC G +L E LM
Sbjct: 312 SIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAG--LLDEGREMFNLMV 369
Query: 409 YLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447
++ + P ++ +Y + ++ VG + A ++ + M +
Sbjct: 370 HVHGIQPTIE-HYGCMVDLLGRVGLLEEAEELVQKMPQK 407
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 148/343 (43%), Gaps = 75/343 (21%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
++ V V W + I+ + +GR +E + F M G P++ T +++LS CA + L
Sbjct: 200 ETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGA--L 257
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G +H + K G+ + V TAL+DMY+K G ++ A VF++ K TWN++I G
Sbjct: 258 SQGEWVHAYIDKNGISIDG-FVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISG 316
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
G + A+++F EM L+ GF +P+ VT
Sbjct: 317 LSTHGSGQHALQIFSEM----------LVEGF---------------------KPNEVTF 345
Query: 219 ISVLNACANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM- 276
+ VL+AC+ G L G + ++ + ++ ++DL R G +E A ++ Q+M
Sbjct: 346 VCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMP 405
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
K V W S+ L AC + G +E
Sbjct: 406 QKEASVVWESL-----------------------------------LGACRNHGNVELAE 430
Query: 337 RYFDIMKKIYRVSPR-IEHYGCIVDLYSRAGRLEDALNVVENM 378
R + +K+ +SP+ + + ++Y+ GR +D + V + M
Sbjct: 431 R---VAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKM 470
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 258/434 (59%), Gaps = 33/434 (7%)
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF---------------------------- 131
LGA +H + G ++ V TAL++MYAK
Sbjct: 65 LGASLHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLA 124
Query: 132 -----GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTAL 186
G + A VFD M + +WN MI GY RGD+ A +FD RDA SW+++
Sbjct: 125 AYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSM 184
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
++ + K +EALE +REM+++GV PD ++++SVL+AC+ +G L IG +HR+V
Sbjct: 185 ISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRV 244
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
+ ++K+ L+D+Y++CG IE + +VF M + +++W+S+I+G A +G +AL F+
Sbjct: 245 EVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSE 304
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M +G +P+ ++F G L AC+H GL+ DG +YF M ++ V PR+EHYGC+VDL RAG
Sbjct: 305 MISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAG 364
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN 426
+E+A+ ++ +M KP+ ++ +LL ACR ++ +AE M L LDP D +YVLL+N
Sbjct: 365 HVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSN 424
Query: 427 MYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLEL 486
+YA W+G ++R+T++ IQ+ PG SSIE + +HEF++GDRSH E IY MLE
Sbjct: 425 IYAQANSWEGVAEMRKTIRRENIQRVPGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEE 484
Query: 487 LSFDLKLCGYVPET 500
+ L+ GY P T
Sbjct: 485 MMDRLRQAGYRPMT 498
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/464 (37%), Positives = 278/464 (59%), Gaps = 4/464 (0%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
+++ V V WT IS + R+GR AEA F M G P+ +T I +LS C
Sbjct: 195 ARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKD-- 252
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM-RVKSSFTWNAMI 156
L G +H LV + ++ +V AL+DMYAK G A VFDA+ R + WNAMI
Sbjct: 253 LNFGCSLHMLVGDKRMLMSDKLV-VALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMI 311
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
DGY + G ++ A +FD+M D I++ +L+ G++ G EAL F +M+ G+ D
Sbjct: 312 DGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNF 371
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T++ +L A A++G L G +H + ++ + +V + L+D+Y +CG +E A F++M
Sbjct: 372 TMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQM 431
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
R + +W+++I G A NG ALE+F M+ +GF + V++ LTACSH+ L+++G
Sbjct: 432 SVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGR 491
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
YFD M+ ++ + P+IEHYGC++DL R+G L++A+++V+ MPM+PN V+ S+L+ACR
Sbjct: 492 LYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRV 551
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
++ LA+ +L+ L+P D+ YV + N+Y +W+ A KIRR M+ RG++K G S
Sbjct: 552 HKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYS 611
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
SI + +H+F+ GDRSH + I M+E + LK GY P T
Sbjct: 612 SIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLKSAGYSPIT 655
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 164/344 (47%), Gaps = 38/344 (11%)
Query: 73 LHGTN--PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
+HG + P+ TF L CA + L LG M+H + L ++ + ++ MYA+
Sbjct: 94 MHGVDVPPDAFTFHFLFKCCARGGAHVL-LGRMLHAACFRTLLPSAVPLIASPIIHMYAE 152
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
G A FD VK W +I G + G ++ A R+ PVR+ ++WT L++G+
Sbjct: 153 LGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGY 212
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
+ G EA++CF M G+ PD VT+I +L+AC + L G +H V + +
Sbjct: 213 SRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSD 272
Query: 251 KVCNTLIDLYSRCG----------------------------C----IEFARQVFQRMHK 278
K+ LID+Y++CG C ++ AR +F +M
Sbjct: 273 KLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMED 332
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
++++NS+I G+ G + EAL F M++ G D + G LTA + G + G
Sbjct: 333 HDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRAL 392
Query: 339 FDIMKKIYRVSPRIEHYG-CIVDLYSRAGRLEDALNVVENMPMK 381
+++ R+ R + G ++D+Y + GR+E+A+ + M ++
Sbjct: 393 HACIEQ--RLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVR 434
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 33/192 (17%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A+ +FD MP + TAL F + + +R M V PD T + CA
Sbjct: 56 ALSLFDRMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCAR 115
Query: 228 VGT-LGIGLWIH--------------------------------RYVLKQDFKDNVKVCN 254
G + +G +H R + +V
Sbjct: 116 GGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWT 175
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
T+I ++ G ++ AR++ R R +V+W +I G++ G EA++ FNSM +G P
Sbjct: 176 TVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAP 235
Query: 315 DGVSFTGALTAC 326
D V+ G L+AC
Sbjct: 236 DEVTVIGMLSAC 247
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/426 (39%), Positives = 255/426 (59%), Gaps = 7/426 (1%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
PN +F GC + G + KLGL+ NN+ V AL+ MY + A
Sbjct: 100 PNQYSFAFAFKGCGS--GVGVLEGEQVRVHAIKLGLE-NNLFVTNALIGMYVNLDFVVDA 156
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
VFD + ++WN M+ GY R G ++ A ++FDEMP +D +SWT +++G ++ GYF
Sbjct: 157 RKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFM 216
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
EAL+ F M G+ P+ T+ S L ACAN+ L G W+H Y+ K + + N ++ LI
Sbjct: 217 EALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLI 276
Query: 258 DLYSRCGCIEFARQVFQ---RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
D+Y++CG +EFA ++F R+ KR + WN++I GFAV+G EA+E F M+ E P
Sbjct: 277 DMYAKCGELEFASKLFNSNPRL-KRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSP 335
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
+ V+F L ACSH +E+G YF+ M YRV P +EHYGC+VDL RAGRL++A +
Sbjct: 336 NKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEI 395
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
+ +M + P+ + G+LL+AC+ D + ER+ K + +LDP +VLLAN+Y+ G W
Sbjct: 396 ISSMHLTPDVAIWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNW 455
Query: 435 DGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC 494
+ A +R + G +K PG SSIE+ H+F+ GDRSH +++ +Y L+ + LK+
Sbjct: 456 NEARTLREKIAESGKKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIA 515
Query: 495 GYVPET 500
GY+PE+
Sbjct: 516 GYIPES 521
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 136/340 (40%), Gaps = 79/340 (23%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ IS + G EA F M G +PN T + L+ CA+ + L G +
Sbjct: 199 VVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVA--LDQGRWM 256
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM-RVKSS-FTWNAMIDGYMRR 162
H + K + N ++ L+DMYAK G ++ A+ +F++ R+K + WNAMI G+
Sbjct: 257 HVYIKKNNIQMNERLLA-GLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFAVH 315
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G + A+ +F+ +M+I V P+ VT +++L
Sbjct: 316 GKSKEAIEVFE-------------------------------QMKIEKVSPNKVTFVALL 344
Query: 223 NACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
NAC++ + G + + K ++ L+DL R G ++ A ++ MH
Sbjct: 345 NACSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMH---- 400
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
PD + L+AC E G R I
Sbjct: 401 ------------------------------LTPDVAIWGALLSACKIHKDAEMGERVGKI 430
Query: 342 MKKIYRVSPRIEHYGC---IVDLYSRAGRLEDALNVVENM 378
+K++ P H GC + ++YS G +A + E +
Sbjct: 431 VKEL---DP--NHLGCHVLLANIYSLTGNWNEARTLREKI 465
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/448 (38%), Positives = 270/448 (60%), Gaps = 4/448 (0%)
Query: 53 SRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLG 112
S + R G EA M G P+ I+ ++ +S C+ + + G HG V + G
Sbjct: 309 SNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRN--ILWGKSCHGYVLRNG 366
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
+ + + AL+DMY K R D A +FD M K+ TWN+++ GY+ G++++A F
Sbjct: 367 FESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETF 425
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTL 231
+ MP ++ +SW +++ V+ +EEA+E F MQ V D VT++S+ +AC ++G L
Sbjct: 426 NTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGAL 485
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
+ WI+ Y+ K + +V++ TL+D++SRCG E A +F + R + +W + I
Sbjct: 486 DLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 545
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR 351
A+ G V A+E FN M ++G KPDGV F GALTAC H GL++ G F+ M+K++ VSP
Sbjct: 546 AMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPE 605
Query: 352 IEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
HYGC+VDL RAG LE+AL ++++MP +PN+V+ SLLAACR +G++ +A + +
Sbjct: 606 DVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQ 665
Query: 412 DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGD 471
L P +YVLL+N+YA+ G+W+ K+R +MK +G++K PG S I+I HEF +GD
Sbjct: 666 VLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGD 725
Query: 472 RSHIESEHIYSMLELLSFDLKLCGYVPE 499
SH E I +ML+ LS G+VP+
Sbjct: 726 ESHPEMRKIEAMLDELSQRASDLGHVPD 753
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 163/372 (43%), Gaps = 80/372 (21%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WTS I + R +A F RM PN +T + ++S CA L G +
Sbjct: 200 VSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLED--LETGEKV 257
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ + G++ N++M+ +A++D YM+
Sbjct: 258 YDFIRDSGIEVNDLMI--------------------------------SALVDMYMKCNA 285
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A R+FDE + A+ + +V++G +EAL M SG+ PD ++++S +++
Sbjct: 286 IDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISS 345
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+ + + G H YVL+ F+ +CN LID+Y +C + A ++F RM +T+V+W
Sbjct: 346 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 405
Query: 285 NSIIVGFAVNGFVGEALEYFNSM--------------------------------QKEGF 312
NSI+ G+ NG V A E FN+M +E
Sbjct: 406 NSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECV 465
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY------RVSPRIEHYGCIVDLYSRAG 366
DGV+ +AC H G + D+ K IY R+ + +VD++SR G
Sbjct: 466 NVDGVTMMSIASACGHLGAL-------DLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCG 518
Query: 367 RLEDALNVVENM 378
E A+++ ++
Sbjct: 519 DPESAMSIFNSL 530
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 163/357 (45%), Gaps = 62/357 (17%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
+ S I + SG EA L F RM G +P+ TF LS CA S+ G IHGL
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCA--KSRDKGNGIQIHGL 158
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ K+ YAK DL F N+++ Y G+++
Sbjct: 159 IIKMD---------------YAK----DL-------------FVQNSLVHFYAECGELDC 186
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF-REMQISGVEPDYVTIISVLNACA 226
A ++FDEM R+ +SWT+++ G+ +R + ++A++ F R ++ V P+ VT++ V++ACA
Sbjct: 187 ARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACA 246
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ L G ++ ++ + N + + L+D+Y +C I+ A+++F L N+
Sbjct: 247 KLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNA 306
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDG 335
+ + G EAL N M G +PD +S A+++CS H ++ +G
Sbjct: 307 MASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNG 366
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLG 388
+D + ++D+Y + R + A + + M K N +V G
Sbjct: 367 FESWDNI------------CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 411
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 113/262 (43%), Gaps = 46/262 (17%)
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE---FARQVFQRM 276
S L C + L + H + KQ D+V L+ G E FA++VF+
Sbjct: 36 SSLKNCKTIDELKM---FHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFENG 92
Query: 277 HKR-TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA------ 329
T +NS+I G+A +G EA+ F M G PD +F L+ C+ +
Sbjct: 93 ESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNG 152
Query: 330 ----GLI-----------EDGLRYF-------DIMKKIY-RVSPR-IEHYGCIVDLYSRA 365
GLI ++ L +F D +K++ +S R + + ++ Y+R
Sbjct: 153 IQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARR 212
Query: 366 GRLEDALNV----VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
+DA+++ V + + PN V + +++AC D+ E++ ++ D G++ N
Sbjct: 213 EFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFI--RDSGIEVND 270
Query: 422 VL---LANMYAAVGKWDGAGKI 440
++ L +MY D A ++
Sbjct: 271 LMISALVDMYMKCNAIDIAKRL 292
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 162/406 (39%), Positives = 253/406 (62%), Gaps = 3/406 (0%)
Query: 47 QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
W + + A+A F R+ +P+H T +L C+ + G ++HG
Sbjct: 80 HWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLD--VRNGKIVHG 137
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
V KLGL ++N+ + ++ +YA G + +A VFD M + TWN MI ++ GD E
Sbjct: 138 YVEKLGL-QSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAE 196
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A ++F EMP R+ SWT+++ G+ + G +EA++ F EM+ +G+ P+ VT+++VL ACA
Sbjct: 197 GAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACA 256
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
++G L +G IH + + ++ N++VCNTLID+Y +CGC+E A ++F M +RT+VSW++
Sbjct: 257 DMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSA 316
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I G A +G +AL FN M G KP+ V+F G L ACSH G++E G +YF M + Y
Sbjct: 317 MIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDY 376
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+ PRIEHYGC+VDL+SRAG L++A + NMP+ PN VV G+LL C+ ++ LAE
Sbjct: 377 GIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEA 436
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
++L LDP D YV+L+N+YA G+W+ ++R+ M+ RG +K
Sbjct: 437 TRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGTWEK 482
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 34/240 (14%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+F + + W L F + +A+ F ++ + PD+ T VL AC+ +
Sbjct: 69 IFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLD 128
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN----- 285
+ G +H YV K + N+ + N ++ LY+ CG I AR+VF +M +R +++WN
Sbjct: 129 VRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIAR 188
Query: 286 --------------------------SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
S+I G+A G EA++ F M+ G P+ V+
Sbjct: 189 LVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTV 248
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKI-YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
L AC+ G + G R D + Y + R+ ++D+Y + G LEDA + +NM
Sbjct: 249 VAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRV--CNTLIDMYVKCGCLEDACRIFDNM 306
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 7/183 (3%)
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
+A+ +FQ + + WN+ + FA +A+ F +++ PD + + L ACS
Sbjct: 65 YAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACS 124
Query: 328 HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
+ +G ++K+ + + IV LY+ G + A V + MP + +V+
Sbjct: 125 RLLDVRNGKIVHGYVEKL-GLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQR--DVIT 181
Query: 388 GSLLAACRTK-GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKG 446
+++ A K GD AE K ++ ++ + YA GK A + M+
Sbjct: 182 WNIMIARLVKMGD---AEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMED 238
Query: 447 RGI 449
G+
Sbjct: 239 AGL 241
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/461 (39%), Positives = 268/461 (58%), Gaps = 6/461 (1%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T NP WT+ I + G +++A ++ M +P TF L S CA L
Sbjct: 71 TPNP-FAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSAL-- 127
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
GA +H LG +++ V A++DMY K G + A +VFD M + +W +I Y
Sbjct: 128 GAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYT 187
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R GD+ +A +FD +PV+D ++WTA++ G+ + +ALE FR ++ GVE D VT++
Sbjct: 188 RIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVG 247
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFK--DNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
V++ACA +G WI F DNV V + LID+YS+CG +E A VF+ M +
Sbjct: 248 VISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRE 307
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R + S++S+IVGFA++G A++ F M + G KP+ V+F G LTACSHAGL++ G +
Sbjct: 308 RNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQL 367
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M+K Y V+P E Y C+ DL SRAG LE AL +VE MPM+ + V G+LL A G
Sbjct: 368 FASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHG 427
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
+ +AE K L +L+P NY+LL+N YA+ G+WD K+R+ ++ + ++K PG S +
Sbjct: 428 NPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWV 487
Query: 459 EIGSG-IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
E +G IH+F+AGD SH + I L L LK GY P
Sbjct: 488 EAKNGMIHKFVAGDVSHPKINEIKKELNDLLERLKGIGYQP 528
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 46/298 (15%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+F ++ + +WTAL+ + RG +AL + M+ V P T ++ +ACA V
Sbjct: 65 LFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRH 124
Query: 231 LGIGLWIH-RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIV 289
+G +H + +L F ++ V N +ID+Y +CG + AR VF M +R ++SW +IV
Sbjct: 125 SALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIV 184
Query: 290 -------------------------------GFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
G+A N +ALE F ++ EG + D V+
Sbjct: 185 AYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVT 244
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKI-----YRVSPRIEHYGCIVDLYSRAGRLEDALN 373
G ++AC+ G +Y + ++ I + V + ++D+YS+ G +E+A +
Sbjct: 245 LVGVISACAQLG----ASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYD 300
Query: 374 VVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD-LDPGVDSNYVLLANMYAA 430
V + M + N S++ G A +K D L+ GV N+V + A
Sbjct: 301 VFKGMRER-NVFSYSSMIVGFAIHGR---ARAAIKLFYDMLETGVKPNHVTFVGVLTA 354
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 7/192 (3%)
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI---EFARQVFQ 274
++ +L C+ +L +H + ++ + + V L+ L + + + R +F
Sbjct: 11 VVRILERCS---SLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFS 67
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
++H +W ++I +A+ G + +AL +++SM+K P +F+ +AC+
Sbjct: 68 QLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSAL 127
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
G + + S + ++D+Y + G L A V + MP + G ++A
Sbjct: 128 GAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYT 187
Query: 395 RTKGDIILAERL 406
R GD+ A L
Sbjct: 188 RI-GDMRAARDL 198
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 165/447 (36%), Positives = 263/447 (58%), Gaps = 38/447 (8%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W S IS ++G EA F RM + P+ T +++L+ CA C G
Sbjct: 168 VRDVVSWNSLISGFMKAGHFDEAISVFFRMDV---EPSMTTLVSVLAACARNGDLCT--G 222
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHG++ + + N+++G A+LDM Y++
Sbjct: 223 KGIHGVIERRF--KVNLVLGNAMLDM-------------------------------YVK 249
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G A +FDE+P RD +SWT ++ G V+ + +++LE F M+ G+ PD + + SV
Sbjct: 250 NGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSV 309
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+ACA++GTL G W+H Y+ ++ K ++ + ++D+Y++CGCIE A ++F M +R
Sbjct: 310 LSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNT 369
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+WN+++ G A++G V EAL F M G KP+ ++F LTAC H GL+++G +YFD
Sbjct: 370 FTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDN 429
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M K+Y + P++EHYGC++DL+ RAG LE+A+ + MPMKP+ ++ G LL AC T G+I
Sbjct: 430 MSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTVGNIE 489
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
L+ R+ Y+++LD +VLL+N+ A +W ++RR MK RG++K PG S IE+
Sbjct: 490 LSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVD 549
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLS 488
HEF+ GD SH+++E IY +L L++
Sbjct: 550 GKAHEFVVGDISHLQTEEIYKVLNLIN 576
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 194/415 (46%), Gaps = 79/415 (19%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ RM G P+ TF LL C++F G +HG+V KLGL L D
Sbjct: 93 YRRMVRDGFVPDMFTFPVLLKACSNFSGS--REGRQVHGVVVKLGL----------LADH 140
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y + N++I Y GD A ++FDEM VRD +SW +L+
Sbjct: 141 YVQ----------------------NSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLI 178
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
+GF+K G+F+EA+ F M VEP T++SVL ACA G L G IH V+++ FK
Sbjct: 179 SGFMKAGHFDEAISVFFRMD---VEPSMTTLVSVLAACARNGDLCTGKGIHG-VIERRFK 234
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
N+ + N ++D+Y + GC A+ +F + R +VSW +I G + ++LE F+ M
Sbjct: 235 VNLVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMM 294
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG-CIVDLYSRAG 366
+ G PD + T L+AC+ G ++ G + + + R H G IVD+Y++ G
Sbjct: 295 RTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQ--RGIKWDIHIGTAIVDMYAKCG 352
Query: 367 RLE-------------------------------DALNVVENMPM---KPNEVVLGSLLA 392
+E +ALN+ E M + KPNE+ ++L
Sbjct: 353 CIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILT 412
Query: 393 ACRTKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
AC G + + M L +L P ++ +Y + +++ G + A ++ RTM
Sbjct: 413 ACCHCGLVDEGRKYFDNMSKLYNLLPKLE-HYGCMIDLFCRAGLLEEAVELARTM 466
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 133/306 (43%), Gaps = 46/306 (15%)
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHR 239
+ + +L+NG+V + + A+ +R M G PD T +L AC+N G +H
Sbjct: 70 SFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHG 129
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
V+K + V N+LI Y CG A +VF M R +VSWNS+I GF G E
Sbjct: 130 VVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDE 189
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
A+ F M E P + L AC+ G + G ++++ ++V+ + + ++
Sbjct: 190 AISVFFRMDVE---PSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGN--AML 244
Query: 360 DLYSRAGRLEDALNVVENMPMK----------------------------------PNEV 385
D+Y + G +A N+ + +P + P+ +
Sbjct: 245 DMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAI 304
Query: 386 VLGSLLAACRTKGDIILAERLMKYL----VDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
+L S+L+AC + G + + +Y+ + D + + V +MYA G + A KI
Sbjct: 305 ILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIV---DMYAKCGCIEMALKIF 361
Query: 442 RTMKGR 447
+M R
Sbjct: 362 YSMSQR 367
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 260/417 (62%), Gaps = 4/417 (0%)
Query: 76 TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMD 135
T + T+ LL C + L LG +HG V + G + +N +V +L++MY + G +
Sbjct: 114 TGGDRFTYPFLLKACGGLMA--LDLGKQVHGHVVRSGCE-SNAIVQNSLIEMYTRAGDLV 170
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
LA VFD M+ + +WN +I + R G + A +F+ MP + +SWTAL++G+ G
Sbjct: 171 LARKVFDGMQERDVVSWNTVISAHARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGD 230
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
F A+E FR MQ+ G EPD V+I++VL ACA +G L +G WI+ Y + VCN
Sbjct: 231 FSGAVEAFRLMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNA 290
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKP 314
L+++Y++CGCI+ A Q+F M ++ ++SW++++ G A +G EA++ F M+++G KP
Sbjct: 291 LVEMYAKCGCIDQALQLFNGMAEKDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKP 350
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
+G++F G L+ACSHAGL+++GL YFD M +Y + P +EHYGCIVDL R+G+++ L++
Sbjct: 351 NGITFVGLLSACSHAGLLDEGLDYFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDL 410
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
+ +MP+ + + GS+L ACR+ GD+ A + LV L+P N V+LAN+YAA +W
Sbjct: 411 ISDMPLPADAKIWGSVLNACRSHGDVDTAVLAAERLVALEPEDVGNLVMLANVYAAARRW 470
Query: 435 DGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
R+ ++ R ++K PG S IE+ + + EF+AG+ E + +L++L+ L
Sbjct: 471 SEVANTRKAIRSRSMRKTPGCSLIEVDNVVQEFVAGEDLKPEFGGLSGVLDILASQL 527
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 168/411 (40%), Gaps = 104/411 (25%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H +L L +++ + T ++ + GR+ AT VF +R + NAMI Y +
Sbjct: 32 VHAHAVRLSLSQSSYL-ATQIVHLCNAHGRVAHATRVFSQVREPNLHLHNAMIKAYAQNH 90
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
A+ ++ M R W + G D T +L
Sbjct: 91 RHLDAITVYIRMLRRRPFPWISCTGG------------------------DRFTYPFLLK 126
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
AC + L +G +H +V++ + N V N+LI++Y+R G + AR+VF M +R +VS
Sbjct: 127 ACGGLMALDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVS 186
Query: 284 WNSII-------------------------------VGFAVNGFVGEALEYFNSMQKEGF 312
WN++I G+ G A+E F MQ EGF
Sbjct: 187 WNTVISAHARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGF 246
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYF------DIMKKIYRVSPRIEHY---GCI----- 358
+PD VS L AC+ G +E G + ++++ Y + +E Y GCI
Sbjct: 247 EPDDVSIVAVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQ 306
Query: 359 ----------------VDLYSRAGRLEDALNVVENMP----MKPNEVVLGSLLAACRTKG 398
V + GR ++A+ + M +KPN + LL+AC G
Sbjct: 307 LFNGMAEKDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAG 366
Query: 399 DIILAERL-----MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
+L E L M + ++PGV+ +Y + ++ +G+I+RT+
Sbjct: 367 --LLDEGLDYFDRMNDVYGIEPGVE-HYGCIVDLLCR------SGQIQRTL 408
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 120/230 (52%), Gaps = 15/230 (6%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + IS H R G++ +A F M + +++ L+SG + + F GA+
Sbjct: 184 VVSWNTVISAHARLGQMRKARAVFNSM----PDKTVVSWTALVSG---YTAAGDFSGAVE 236
Query: 105 HGLVCKL-GLDRNNVMVGTALLDMYAKFGRMDLATVVF----DAMRVKSSFTWNAMIDGY 159
+ ++ G + ++V + A+L A+ G ++L ++ ++ ++ NA+++ Y
Sbjct: 237 AFRLMQMEGFEPDDVSI-VAVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMY 295
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTI 218
+ G I+ A+++F+ M +D ISW+ ++ G G +EA++ F EM+ G V+P+ +T
Sbjct: 296 AKCGCIDQALQLFNGMAEKDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITF 355
Query: 219 ISVLNACANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267
+ +L+AC++ G L GL + R + V+ ++DL R G I+
Sbjct: 356 VGLLSACSHAGLLDEGLDYFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQ 405
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/460 (36%), Positives = 278/460 (60%), Gaps = 10/460 (2%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + + + +S +A L + M + P++ T+ ++ CA + F G IH
Sbjct: 97 WNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLE--FGGKEIHDH 154
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD--- 164
V K+G D ++V V L++MYA G M A +FD V S +WN+++ GY+++GD
Sbjct: 155 VLKVGFD-SDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQ 213
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A ++F+EM +D +SW+AL++G+ + G +EEAL F EM +G+ D V ++SVL+A
Sbjct: 214 VMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSA 273
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI----DLYSRCGCIEFARQVFQRMHKRT 280
CA++ + G IH V++ + V + N LI D+Y +CGC+E A +VF M ++
Sbjct: 274 CAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKG 333
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+ SWN++I+G AVNG V +L+ F+ M+ G P+ ++F G L AC H GL+++G +F
Sbjct: 334 VSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFA 393
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + + + P ++HYGC+VDL RAG L +A ++E+MPM P+ G+LL AC+ GD
Sbjct: 394 SMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDT 453
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+ ER+ + L++L P D +VLL+N++A+ G W+ ++R MK +G+ K PG S IE
Sbjct: 454 EMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEA 513
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+HEF+AGD++H + ML ++ LK+ GY P+T
Sbjct: 514 NGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDT 553
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 126/312 (40%), Gaps = 85/312 (27%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ ++++FD + + W ++ +++ E+AL ++ M + V PD T V+ A
Sbjct: 79 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 138
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR-------------- 270
CA G IH +VLK F +V V NTLI++Y+ CG + AR
Sbjct: 139 CAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSW 198
Query: 271 --------------------QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
++F M ++ +VSW+++I G+ NG EAL F M
Sbjct: 199 NSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNAN 258
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR--IEHYGCI--------VD 360
G + D V L+AC+H +++ G K I+ + R IE Y + D
Sbjct: 259 GMRLDEVVVVSVLSACAHLSIVKTG-------KMIHGLVIRMGIESYVNLQNALIHMYSD 311
Query: 361 LYSRAGRLEDALNVVENMPMK----------------------------------PNEVV 386
+Y + G +E+AL V M K PNE+
Sbjct: 312 MYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEIT 371
Query: 387 LGSLLAACRTKG 398
+L ACR G
Sbjct: 372 FMGVLGACRHMG 383
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 84/187 (44%), Gaps = 6/187 (3%)
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
++++ Q+F R+ WN+++ + + +AL + M K PD ++ + A
Sbjct: 79 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 138
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMKPN 383
C+ L+E G + +I + +V + Y ++++Y+ G + DA + + P+ +
Sbjct: 139 CA-VRLLEFGGK--EIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPV-LD 194
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRT 443
V S+LA KGD+ K ++D ++ L + Y G ++ A +
Sbjct: 195 SVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIE 254
Query: 444 MKGRGIQ 450
M G++
Sbjct: 255 MNANGMR 261
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/455 (37%), Positives = 266/455 (58%), Gaps = 5/455 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPSQCLFLGAM 103
V WT+ + + R G EA F RM + G PN +T + S L LG M
Sbjct: 197 VVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQI--GLLGLGRM 254
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H V + G+ R +V + AL+DM+ K G + A +FD M +K ++W +M+ Y + G
Sbjct: 255 VHQCVVESGV-RMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCG 313
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+E+A ++F E+P R+A+SW+ ++ + + EEA+ F +M +GVEP T++SVL+
Sbjct: 314 DLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLS 373
Query: 224 ACANVGTLGIGLWIH-RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
ACA +G L +G ++ Y++ + V + N ID++++CG + A ++F+ M + +V
Sbjct: 374 ACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVV 433
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN++IV A++G EAL F + G PD +++ G L+ACSH+GL+ +G +F M
Sbjct: 434 SWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEGRYHFKEM 493
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
K +Y + PR EHY C++DL + G LE+A V +MP+ +E G+LL ACR G++ +
Sbjct: 494 KIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGALLNACRMHGNVEI 553
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
+ LV LDP YVL++ +YA+ KW IR M+ RG++K PG SSIE+
Sbjct: 554 GKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIRTVMRDRGVKKNPGCSSIEVDG 613
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV 497
HEF+A D SH SE IY+ LE + KL GY+
Sbjct: 614 KFHEFLAADVSHAHSEDIYAALENIYLHSKLEGYI 648
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 162/369 (43%), Gaps = 74/369 (20%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+S NA++ Y + A ++FDEM RD +SWT L++G+ + G +EA F M
Sbjct: 164 QSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRM 223
Query: 207 QISGVE-PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
++G P+ VT+++ +A +G LG+G +H+ V++ + +V + N L+D++ +CGC
Sbjct: 224 VVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGC 283
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNG------------------------------ 295
+ A+++F M + + SW S++ +A G
Sbjct: 284 VASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQA 343
Query: 296 -FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
EA+ FN M G +P + L+AC+ G ++ G +D ++V +
Sbjct: 344 NLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNL 403
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMK--------------------------------- 381
+D++++ G + A + NM K
Sbjct: 404 SNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGI 463
Query: 382 -PNEVVLGSLLAACRTKGDIILAE-----RLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
P+E+ +L+AC G +++E + MK + ++P + +Y + ++ VG +
Sbjct: 464 FPDEITYIGVLSACSHSG--LVSEGRYHFKEMKIVYGIEPRAE-HYACMIDLLGKVGLLE 520
Query: 436 GAGKIRRTM 444
A ++ R+M
Sbjct: 521 EAFEVARSM 529
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 8/226 (3%)
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
++ GF++ G AL FR + + D TI+ + A + IH K+
Sbjct: 103 MMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATTSSSPAEA--IHCVAFKRG 160
Query: 246 F-KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
F +V V N L+ +Y+ + AR++F M R +VSW +++ G+A G EA F
Sbjct: 161 FIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVF 220
Query: 305 NSMQKEGFK-PDGVSFTGALTACSHAGLIEDG-LRYFDIMKKIYRVSPRIEHYGCIVDLY 362
M G P+ V+ A +A GL+ G + + +++ R+S +E+ +VD++
Sbjct: 221 CRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLEN--ALVDMF 278
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
+ G + A + + MP+K + S+++A GD+ A +L K
Sbjct: 279 GKCGCVASAKEIFDGMPIK-DVYSWTSMVSAYAKCGDLENAGKLFK 323
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/425 (39%), Positives = 260/425 (61%), Gaps = 34/425 (8%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA--KFGRMD 135
PN T+ +L CA + L LG +HG V K G + V V L+ MY + G
Sbjct: 8 PNKFTYPFVLKACAGIGN--LNLGKSVHGSVMKFGFG-DEVNVQNTLVHMYCCCRGGE-- 62
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
G IE A ++FDEM D++SW+A++ G+V+ G
Sbjct: 63 ---------------------------GGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGR 95
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
+A+ FREMQI GV PD +T++SVL+AC +G L +G W+ YV K+ + NV++ N
Sbjct: 96 SSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNA 155
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
LID++++CG ++ A +F+ M +R +VSW S+I G A++G EA+ F M + G PD
Sbjct: 156 LIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPD 215
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V F G L+ACSH+GL++ G RYFD M+K + + P+IEHYGC+VD+ RAG +++AL V
Sbjct: 216 DVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFV 275
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
+ MP+ PN VV +L+ ACR G++ L E++ + L+ +P +SNYVLL+N+YA + W+
Sbjct: 276 QEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWE 335
Query: 436 GAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCG 495
+IR M +G++K PG + IE+ + I+EF+AGD+SH +S+ IY M++ + ++K G
Sbjct: 336 KKTRIREAMDMKGMKKIPGSTMIELDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAG 395
Query: 496 YVPET 500
Y+P T
Sbjct: 396 YMPTT 400
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 151/350 (43%), Gaps = 75/350 (21%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W++ I + R GR ++A F M + G P+ IT +++LS C + L LG +
Sbjct: 80 SVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGA--LELGKWV 137
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
V K + +N V + AL+DM+AK G +D AT +F +MR ++ +W ++I G G
Sbjct: 138 ESYVEKERVQKN-VELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHG- 195
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
RG EA+ F EM SGV PD V I +L+A
Sbjct: 196 ----------------------------RGV--EAVAVFEEMVRSGVTPDDVVFIGLLSA 225
Query: 225 CANVGTLGIGLWIHRYV--LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
C++ G + G RY +++DF +++ GC
Sbjct: 226 CSHSGLVDKG---KRYFDSMRKDF--------SIVPKIEHYGC----------------- 257
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
++ G V EAL++ M P+ V + + AC G ++ G + I
Sbjct: 258 ----MVDMLCRAGLVKEALKFVQEMP---IDPNPVVWRTLINACRAHGELKLGEK---IT 307
Query: 343 KKIYRVSPRIE-HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLL 391
+++ R P E +Y + ++Y++ E + E M MK + + GS +
Sbjct: 308 RQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTM 357
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/455 (37%), Positives = 266/455 (58%), Gaps = 36/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S IS + + EA F M G PN ++ +++L C + L LG +
Sbjct: 194 VSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGD--LKLGTWVE 251
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + + N M G+AL+ MY K G D+
Sbjct: 252 EFVVENKMTLNYFM-GSALIHMYGKCG-------------------------------DL 279
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
SA R+FD M +D ++W A++ G+ + G EEA++ F++M++S PD +T+I +L+AC
Sbjct: 280 VSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSAC 339
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++G L +G + Y ++ F+D+V V L+D+Y++CG ++ A +VF M + VSWN
Sbjct: 340 ASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWN 399
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEG--FKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
++I A +G EAL F SM EG P+ ++F G L+AC HAGL+++G R F +M
Sbjct: 400 AMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMS 459
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ + P+IEHY C+VDL+SRAG LE+A + V MP KP+EV+LG+LL AC+ + +I ++
Sbjct: 460 SSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDIS 519
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
ER+MK L++L+P NYV+ + +YA + +WD + ++R MK +G+ K PG S I+I S
Sbjct: 520 ERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQ 579
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+HEF AGD H E I+ +L+LL DL+ GY+P
Sbjct: 580 LHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIP 614
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 187/367 (50%), Gaps = 37/367 (10%)
Query: 65 ALEF-TRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTA 123
ALEF +RM G PN++T+ L C++ + + G M H V + GLD + V +
Sbjct: 111 ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLA--VENGRMGHCSVIRRGLDEDG-HVSHS 167
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
L+ MYA+ G+M GD A ++FDE+ +D +SW
Sbjct: 168 LITMYARCGKM----------------------------GD---ARKVFDEISQKDLVSW 196
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
++++G+ K + EA+ FREM +G +P+ ++++SVL AC +G L +G W+ +V++
Sbjct: 197 NSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVE 256
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
N + + LI +Y +CG + AR++F M K+ V+WN++I G+A NG EA++
Sbjct: 257 NKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKL 316
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F M+ PD ++ G L+AC+ G ++ G + +I + +VD+Y+
Sbjct: 317 FQDMRMSSTAPDQITLIGILSACASIGALDLG-KQVEIYASERGFQDDVYVGTALVDMYA 375
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
+ G L++A V MP K NEV ++++A G A L K +++ V N +
Sbjct: 376 KCGSLDNAFRVFYGMPNK-NEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDIT 434
Query: 424 LANMYAA 430
+ +A
Sbjct: 435 FVGVLSA 441
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 141/289 (48%), Gaps = 46/289 (15%)
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
ALE + M+ G++P+ +T + AC+N+ + G H V+++ ++ V ++LI
Sbjct: 111 ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLIT 170
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
+Y+RCG + AR+VF + ++ LVSWNS+I G++ GEA+ F M + GF+P+ +S
Sbjct: 171 MYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMS 230
Query: 319 FTGALTACSHAG-----------LIEDGL------------------------RYFDIMK 343
L AC G ++E+ + R FD MK
Sbjct: 231 LVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK 290
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK---PNEVVLGSLLAACRTKGDI 400
K +V+ + ++ Y++ G E+A+ + ++M M P+++ L +L+AC + G +
Sbjct: 291 KKDKVT-----WNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGAL 345
Query: 401 ILAERLMKYLVDLDPGVDSNYV--LLANMYAAVGKWDGAGKIRRTMKGR 447
L +++ Y + D YV L +MYA G D A ++ M +
Sbjct: 346 DLGKQVEIYASE-RGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNK 393
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 259/421 (61%), Gaps = 7/421 (1%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL-- 98
V V W S I + + R + F M G + +T I ++S C +
Sbjct: 614 VVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMAD 673
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
++ I ++ +V +G L+D + + G++ A VF M+V++ T NAMI
Sbjct: 674 YMVRYIEDYCIEV-----DVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAA 728
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + DI SA ++FD++P +D ISW+++++G+ + +F +ALE FR+MQ + V+PD + I
Sbjct: 729 YAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVI 788
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
SV+++CA++G L +G W+H YV + + K + + N+LID+Y +CG + A QVF+ M +
Sbjct: 789 ASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKE 848
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +SWNSII+G A NGF E+L F +M EGF+P+GV+F G L AC++A L+E+GL +
Sbjct: 849 KDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDH 908
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F+ MK++Y + P+++HYGC+VDL RAG+LE AL + MP+ P+ VV LL +C T G
Sbjct: 909 FESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHG 968
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
D+ +AE + K L +L+P NY LL+N YA+ +W A +R+ M ++K PG S++
Sbjct: 969 DVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAV 1028
Query: 459 E 459
E
Sbjct: 1029 E 1029
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 242/438 (55%), Gaps = 15/438 (3%)
Query: 14 FLPHQQNPNQNLTTTPQ-ISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMT 72
L HQ Q L Q I+ Q + + T W + + + +A F
Sbjct: 28 LLEHQDRRRQLLQIHSQLIAHQVFDRRPT-----PWHALLKAYSHGPHPQDALQLFRHAR 82
Query: 73 LHGTNPNHITFITLLSGCAD--FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
H + + F L CA +P C+ +HGLV + G + V TAL+++Y
Sbjct: 83 WHAADDTY-AFTFALKACAGLGWPRCCM----QLHGLVVRKGFEFQT-YVHTALVNVYIL 136
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
G + + + F+ M VK++ +WN +I G+ G++E A +F+ MP R+ +SW+ +++G+
Sbjct: 137 CGCLADSRMAFEEMPVKNAVSWNVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGY 196
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
+ EA+ FR M G+ P +T+++V+ A +NVG + IG +H Y K+ +V
Sbjct: 197 TRACRPVEAVALFRRMMAEGISPSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDV 256
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
+V N+LIDLY++ G I+ + +VF M +R LVSW SII GFA++G +A+E F M++
Sbjct: 257 RVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRR 316
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
G +P+ ++F L ACSH GL+E G+ +F M Y ++P ++H+GCI+D+ RAGRL
Sbjct: 317 AGIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLR 376
Query: 370 DALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYA 429
+A ++ + P++ N V +LL C G++ + ER MK ++ L+ ++V+L+NM
Sbjct: 377 EAEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLT 436
Query: 430 AVGKWDGAGKIRRTMKGR 447
+ ++ A +R+ + R
Sbjct: 437 ELRRFSDAEIVRKLVDQR 454
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 168/379 (44%), Gaps = 70/379 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W I +S A+A + + G P+++TF +L CA L G +
Sbjct: 517 TFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARI--NALNEGEQM 574
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + KLGL +++ V +L+ +YA G + A VFD M VK +WN++I GY
Sbjct: 575 HNHITKLGL-LSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYS---- 629
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ F++ L F+ MQ GV+ D VT+I V++A
Sbjct: 630 ---------------------------QCNRFKDILALFKLMQNEGVKADKVTMIKVVSA 662
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE----------------- 267
C +G + ++ RY+ + +V + NTL+D + R G ++
Sbjct: 663 CTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTM 722
Query: 268 --------------FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
AR++F ++ K+ L+SW+S+I G++ +ALE F MQ+ K
Sbjct: 723 NAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVK 782
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
PD + +++C+H G ++ G + +++ + ++D+Y + G ++AL
Sbjct: 783 PDAIVIASVVSSCAHLGALDLGKWVHEYVRR-NNIKADTIMENSLIDMYMKCGSAKEALQ 841
Query: 374 VVENMPMKP----NEVVLG 388
V + M K N +++G
Sbjct: 842 VFKEMKEKDTLSWNSIIIG 860
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 175/363 (48%), Gaps = 30/363 (8%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+ A ++FD++ W L+ G + +A+ +++ Q G+ PD +T +L
Sbjct: 501 DLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILK 560
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA + L G +H ++ K ++ V N+LI LY+ CG + +AR VF M + +VS
Sbjct: 561 ACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVS 620
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG---LIEDGLRYFD 340
WNS+I G++ + L F MQ EG K D V+ ++AC+ G + + +RY +
Sbjct: 621 WNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIE 680
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
Y + + +VD + R G+L+ A V NM ++ N V + +++AA DI
Sbjct: 681 ----DYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVR-NIVTMNAMIAAYAKGQDI 735
Query: 401 ILAERLMKYLVDLDPGVD-SNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK------- 452
+ A ++ D P D ++ + + Y+ + A +I R M+ ++
Sbjct: 736 VSARKIF----DQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASV 791
Query: 453 ----PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET--VAGELY 506
L ++++G +HE++ R++I+++ I L+ +K CG E V E+
Sbjct: 792 VSSCAHLGALDLGKWVHEYV--RRNNIKADTIMEN-SLIDMYMK-CGSAKEALQVFKEMK 847
Query: 507 END 509
E D
Sbjct: 848 EKD 850
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 162/419 (38%), Positives = 255/419 (60%), Gaps = 11/419 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I + + + E F MT + +T + ++ C+ F +M+
Sbjct: 183 VSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHL-GDWEFADSMVK 241
Query: 106 GLVCKLGLDRNN----VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ NN V +G L+DMY + +LA VFD MR ++ +WNA++ G+ +
Sbjct: 242 YI------KENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAK 295
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++ +A ++FD MP RD ISWT+++ G+ + F +A++ F+EM + V+PD VT+ SV
Sbjct: 296 VGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASV 355
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+ACA++G L +G +H Y+ + + ++ V N+LID+Y +CG +E A +VF RM +
Sbjct: 356 LSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDS 415
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSW S+I G AVNGF AL+ F+ M +EG +P +F G L AC+HAGL+ GL YF+
Sbjct: 416 VSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFES 475
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M+ ++ + P ++HYGC+VDL SR+G ++ A ++ MP+ P+ VV LL+AC+ G+++
Sbjct: 476 MESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVV 535
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
LAE K L++LDP NYVLL+N YA V +WD A K+R M+ +QK G SSIE+
Sbjct: 536 LAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSIEV 594
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 161/370 (43%), Gaps = 67/370 (18%)
Query: 44 PT-VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
PT V W I +S EA +TRM G N++T I L CA + G
Sbjct: 79 PTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSD--IVSGR 136
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
IH KLG + + + V AL+ MYA G++ A +FD M + +WN +I GY +
Sbjct: 137 KIHVHALKLGFE-SYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQY 195
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
+ +R+FD M + ++ D VT++ ++
Sbjct: 196 NKYKEVLRLFDAMTA-------------------------------ANIKADAVTMVKII 224
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC+++G + +Y+ + + + +V + NTLID+Y R E A+ VF RM +R +V
Sbjct: 225 LACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIV 284
Query: 283 SWNSIIVGFA--------------------------VNGF-----VGEALEYFNSMQKEG 311
SWN++++G A + G+ +A++ F M
Sbjct: 285 SWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAK 344
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
KPD V+ L+AC+H G ++ G +++ + V I ++D+Y + G +E A
Sbjct: 345 VKPDKVTVASVLSACAHLGKLDVGWAVHHYIRR-HGVQADIYVGNSLIDMYCKCGMVEKA 403
Query: 372 LNVVENMPMK 381
L V M K
Sbjct: 404 LEVFHRMKDK 413
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 157/352 (44%), Gaps = 26/352 (7%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
++ A +F+++ + W ++ G + + EA+ + M G+ + +T+I +
Sbjct: 65 NLHKAHLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFK 124
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA V + G IH + LK F+ + V N LI +Y+ CG + FA+++F M R LVS
Sbjct: 125 ACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVS 184
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM- 342
WN++I G++ E L F++M K D V+ + ACSH G E + D M
Sbjct: 185 WNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWE----FADSMV 240
Query: 343 KKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
K I + I+ Y ++D+Y R E A V + M + N V +L+ G++
Sbjct: 241 KYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRER-NIVSWNALVMGHAKVGNL 299
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK-------- 452
A +L + D ++ + Y+ ++ A K+ + M ++
Sbjct: 300 TAARKLFDNMPKRDV---ISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVL 356
Query: 453 ---PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
L +++G +H ++ R H IY L+ K CG V + +
Sbjct: 357 SACAHLGKLDVGWAVHHYI---RRHGVQADIYVGNSLIDMYCK-CGMVEKAL 404
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 62/147 (42%), Gaps = 36/147 (24%)
Query: 45 TVQWTSSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
+V WTS IS +G A +AL+ F++M G P H TF+ +L CA
Sbjct: 415 SVSWTSVISGLAVNG-FANSALDLFSQMLREGVQPTHGTFVGILLACAHA---------- 463
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
GLV K GL+ F M+ + AM+ + ++D R G
Sbjct: 464 --GLVNK-GLEY---------------FESMESVHGLVPAMK-----HYGCVVDLLSRSG 500
Query: 164 DIESAVRMFDEMP-VRDAISWTALLNG 189
+I+ A +MP V D + W LL+
Sbjct: 501 NIDKAYEFIKKMPIVPDVVVWRILLSA 527
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/525 (35%), Positives = 286/525 (54%), Gaps = 72/525 (13%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ I+ + GR+ EA L F +M G PN +TF+++L C+ PS L G I
Sbjct: 372 VVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSR-PS-ALKQGRQI 429
Query: 105 HGLVCKLG------------------------------LDRNNVMVGTALLDMYAKFGRM 134
H + K G + + NV+ A++ Y + +
Sbjct: 430 HDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKY 489
Query: 135 DLATVVFDAMRVK------SSFT----------------W-----------------NAM 155
D A F A+ + S+FT W NA+
Sbjct: 490 DNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNAL 549
Query: 156 IDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
+ ++ GD+ SA+ +F++MP RD +SW ++ GFV+ G + A + F+ MQ SGV+PD
Sbjct: 550 VSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQ 609
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
+T +LNACA+ L G +H + + +V V LI +Y++CG I+ A VF
Sbjct: 610 ITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHN 669
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+ K+ + SW S+I G+A +G EALE F MQ+EG KPD ++F GAL+AC+HAGLI++G
Sbjct: 670 LPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEG 729
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
L +F+ MK + + PR+EHYGC+VDL+ RAG L +A+ + M +KP+ + G+LL AC+
Sbjct: 730 LHHFESMKD-FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQ 788
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
D+ LAE++ + ++LDP D YV+L+N+YAA G W K+R+ M RG+ KKPG
Sbjct: 789 VHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQ 848
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
S IE+ +H F + D++H + E I++ L L ++K GYVP+T
Sbjct: 849 SWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDT 893
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 199/443 (44%), Gaps = 78/443 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ WTS I+ R + +A F M G P+ + F++LL C + P + L G +H
Sbjct: 272 ITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKAC-NHP-EALEQGKRVH 329
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ ++GLD + VGTALL MY K G M
Sbjct: 330 ARMKEVGLD-TEIYVGTALLSMYTKCGSM------------------------------- 357
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A+ +F+ + R+ +SWTA++ GF + G EEA F +M SG+EP+ VT +S+L AC
Sbjct: 358 EDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGAC 417
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ L G IH ++K + + +V L+ +Y++CG + AR VF+R+ K+ +V+WN
Sbjct: 418 SRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWN 477
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD--IMK 343
++I + + A+ F ++ KEG KPD +FT L C +E G ++ I++
Sbjct: 478 AMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIR 536
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP------------------------ 379
+ I + +V ++ G L A+N+ +MP
Sbjct: 537 AGFESDLHIRN--ALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAF 594
Query: 380 ----------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LAN 426
+KP+++ LL AC + + RL + + +D + V+ L +
Sbjct: 595 DYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALIT--EAALDCDVVVGTGLIS 652
Query: 427 MYAAVGKWDGAGKIRRTMKGRGI 449
MY G D A + + + +
Sbjct: 653 MYTKCGSIDDAHLVFHNLPKKNV 675
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 172/347 (49%), Gaps = 38/347 (10%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + + + R EA +M G P+ TF+ +L+ CAD ++ + G + L
Sbjct: 173 WNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACAD--AKNVDKGGELFSL 230
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ G D ++ VGTAL++M+ K G ++
Sbjct: 231 ILNAGWD-TDLFVGTALINMHIKCG-------------------------------GVDD 258
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A+++F+ +P RD I+WT+++ G + F++A F+ M+ GV+PD V +S+L AC +
Sbjct: 259 ALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNH 318
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
L G +H + + + V L+ +Y++CG +E A +VF + R +VSW ++
Sbjct: 319 PEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAM 378
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKKIY 346
I GFA +G + EA +FN M + G +P+ V+F L ACS ++ G + D I+K Y
Sbjct: 379 IAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGY 438
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
R+ ++ +Y++ G L DA NV E + K N V +++ A
Sbjct: 439 ITDDRVR--TALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITA 482
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 150/284 (52%), Gaps = 4/284 (1%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F WN +I Y + G+ SA ++FDEMP +D SW LL G+V+ +EEA +M
Sbjct: 140 FMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQD 199
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
GV+PD T + +LNACA+ + G + +L + ++ V LI+++ +CG ++ A
Sbjct: 200 GVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDA 259
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
+VF + +R L++W S+I G A + +A F M++EG +PD V+F L AC+H
Sbjct: 260 LKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHP 319
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
+E G R MK++ + I ++ +Y++ G +EDAL V N+ N V +
Sbjct: 320 EALEQGKRVHARMKEV-GLDTEIYVGTALLSMYTKCGSMEDALEVF-NLVKGRNVVSWTA 377
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGK 433
++A G + E + + ++ G++ N V ++ A +
Sbjct: 378 MIAGFAQHGR--MEEAFLFFNKMIESGIEPNRVTFMSILGACSR 419
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 130/311 (41%), Gaps = 42/311 (13%)
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
+++ A LN K G EA+ + ++ T S+L C LG G
Sbjct: 66 IKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGER 125
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
IH ++ + ++ + N LI +Y++CG A+Q+F M + + SWN ++ G+ +
Sbjct: 126 IHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRR 185
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY- 355
EA M ++G KPD +F L AC+ A ++ G F + I + +
Sbjct: 186 YEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSL---ILNAGWDTDLFV 242
Query: 356 -GCIVDLYSRAGRLEDALNVVENMP----------------------------------M 380
+++++ + G ++DAL V N+P +
Sbjct: 243 GTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGV 302
Query: 381 KPNEVVLGSLLAACRTKGDIILAERLMKYL--VDLDPGVDSNYVLLANMYAAVGKWDGAG 438
+P++V SLL AC + +R+ + V LD + LL+ MY G + A
Sbjct: 303 QPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLS-MYTKCGSMEDAL 361
Query: 439 KIRRTMKGRGI 449
++ +KGR +
Sbjct: 362 EVFNLVKGRNV 372
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 172/377 (45%), Positives = 241/377 (63%), Gaps = 12/377 (3%)
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV--RDAISWT 184
++A+ + LAT+VF VK N+++ Y G ESA R+FDE+PV R+ +SW
Sbjct: 140 IHAEAAKNGLATLVF----VK-----NSLVHLYGACGLFESAHRVFDEIPVGERNLVSWN 190
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
++LNGF G E L FREM PD T++SVL A A +G L +G +H Y+ K
Sbjct: 191 SMLNGFAANGRPNEVLTIFREMLDVNFMPDGFTVVSVLTASAEIGALALGRRVHVYLTKV 250
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFVGEALEY 303
+N V N LIDLY++CG +E AR+VF+ M +RT+VSW S+IVG AVNGF EALE
Sbjct: 251 GLVENSHVGNALIDLYAKCGGVEDARRVFEEMGARRTVVSWTSLIVGLAVNGFGKEALEL 310
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F M++E P ++ G L ACSH GL++DG YF+ MK+ Y ++PRIEH GC+VDL
Sbjct: 311 FGIMEREKLVPTEITMVGVLYACSHCGLVDDGFMYFNRMKEEYNIAPRIEHLGCMVDLLG 370
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
RAG++++A + + MP++PN VV +LL AC + L E LV+LDPG +YVL
Sbjct: 371 RAGKVKEAYDYILTMPLEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVL 430
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSM 483
L+N+YAAVG+W +R+TM G++K PG S +E+ + ++EF+ GDRSH ESE IY M
Sbjct: 431 LSNLYAAVGRWADVHVLRKTMVKDGVRKNPGRSLVELRNSVYEFVMGDRSHPESEQIYQM 490
Query: 484 LELLSFDLKLCGYVPET 500
L ++ L+ GY+P T
Sbjct: 491 LAEVADSLRREGYIPRT 507
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD T +L ACA + +L G IH K V V N+L+ LY CG E A +V
Sbjct: 116 PDTHTYPPLLQACARLLSLRHGERIHAEAAKNGLATLVFVKNSLVHLYGACGLFESAHRV 175
Query: 273 FQRMH--KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
F + +R LVSWNS++ GFA NG E L F M F PDG + LTA + G
Sbjct: 176 FDEIPVGERNLVSWNSMLNGFAANGRPNEVLTIFREMLDVNFMPDGFTVVSVLTASAEIG 235
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYG-CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
+ G R + K+ V H G ++DLY++ G +EDA V E M + V S
Sbjct: 236 ALALGRRVHVYLTKVGLVEN--SHVGNALIDLYAKCGGVEDARRVFEEMGARRTVVSWTS 293
Query: 390 LLAACRTKG 398
L+ G
Sbjct: 294 LIVGLAVNG 302
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 35/245 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S ++ +GR E F M P+ T +++L+ A+ L LG +H
Sbjct: 187 VSWNSMLNGFAANGRPNEVLTIFREMLDVNFMPDGFTVVSVLTASAEI--GALALGRRVH 244
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K+GL N+ VG AL+D+YAK G ++ A VF+ M +
Sbjct: 245 VYLTKVGLVENS-HVGNALIDLYAKCGGVEDARRVFEEMGAR------------------ 285
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
R +SWT+L+ G G+ +EALE F M+ + P +T++ VL AC
Sbjct: 286 ------------RTVVSWTSLIVGLAVNGFGKEALELFGIMEREKLVPTEITMVGVLYAC 333
Query: 226 ANVGTLGIG-LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVS 283
++ G + G ++ +R + + ++ ++DL R G ++ A M + V
Sbjct: 334 SHCGLVDDGFMYFNRMKEEYNIAPRIEHLGCMVDLLGRAGKVKEAYDYILTMPLEPNAVV 393
Query: 284 WNSII 288
W +++
Sbjct: 394 WRTLL 398
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 164/444 (36%), Positives = 270/444 (60%), Gaps = 8/444 (1%)
Query: 59 GRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNV 118
G++ +++M +G P++ T +L CA Q LG HG KLG ++
Sbjct: 84 GKLINTIQIYSQMLENGLYPDNYTLPYVLKACAGL--QSCHLGESAHGQSVKLGF-WFDI 140
Query: 119 MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR 178
VG L+ MY+ FG + A +FD M ++ +W MI GY + GD+E+A +FDE P++
Sbjct: 141 FVGNTLIAMYSSFGNVRAARCIFDEMPWHTAVSWTVMISGYAKVGDVETARMLFDEAPMK 200
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIH 238
D W ++++G+V+ F+E L+ FR MQ +G+EPD ++S+L ACA++G + IG+W+H
Sbjct: 201 DRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCACAHLGAMEIGVWVH 260
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
RY+ + +V++ LID+Y++CG ++ A+++F M +R + WN++I G A+NG
Sbjct: 261 RYLDQLGHPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICWNAMISGMAMNGDGD 320
Query: 299 EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCI 358
AL F+ M+K G KPD ++F TACS++G+ + +R + M +Y + P+ EHYGCI
Sbjct: 321 NALRLFSEMEKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNSMCTVYNMEPKSEHYGCI 380
Query: 359 VDLYSRAGRLEDALNVVENMP--MKPNEVVLG--SLLAACRTKGDIILAERLMKYLVDLD 414
VDL RAG L++A ++ MP P E + +LL+AC + G +AE + L L+
Sbjct: 381 VDLLGRAGLLKEAKELILKMPNSSSPTEQAIAWRALLSACCSHGQTEVAEDAAQRLFHLE 440
Query: 415 PGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSH 474
+ YVLL+N+YAA GK D +IR+ M+ RG+ K PG SS++I +HEF+AG+ +H
Sbjct: 441 HHSGA-YVLLSNLYAAAGKQDHVRRIRKMMENRGVDKAPGCSSVKINGVVHEFIAGEETH 499
Query: 475 IESEHIYSMLELLSFDLKLCGYVP 498
++ E ++ +LE ++ + G+ P
Sbjct: 500 LQMEEVHRVLEKMNKQMGYSGFNP 523
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%)
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G + A ++F ++ ++ FV +G ++ + +M +G+ PD T+ V
Sbjct: 52 HGSLPHAWKLFQQIQHPTICICNTMIKAFVLKGKLINTIQIYSQMLENGLYPDNYTLPYV 111
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L ACA + + +G H +K F ++ V NTLI +YS G + AR +F M T
Sbjct: 112 LKACAGLQSCHLGESAHGQSVKLGFWFDIFVGNTLIAMYSSFGNVRAARCIFDEMPWHTA 171
Query: 282 VSWNSIIVGFA--------------------------VNGFV-----GEALEYFNSMQKE 310
VSW +I G+A ++G+V E L+ F MQ
Sbjct: 172 VSWTVMISGYAKVGDVETARMLFDEAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQST 231
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGL---RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
G +PD L AC+H G +E G+ RY D + + +S R+ ++D+Y++ G
Sbjct: 232 GLEPDEAILVSILCACAHLGAMEIGVWVHRYLDQLG--HPLSVRLS--TGLIDMYAKCGS 287
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
L+ A + + M + + + ++++ GD A RL
Sbjct: 288 LDIAKKLFDGMSQR-DTICWNAMISGMAMNGDGDNALRL 325
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/456 (37%), Positives = 268/456 (58%), Gaps = 9/456 (1%)
Query: 43 NPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP + W + I RS A F M P ++T+ ++ A G
Sbjct: 89 NPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHA--HYG 146
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK----SSFTWNAMID 157
A +HG V KLGL +N+ + ++ MYA G M A VFD +++ N+MI
Sbjct: 147 AQLHGRVVKLGL-QNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIM 205
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GY + G+I+ + +FD+M R ++SW ++++G+V+ G EALE F +MQ+ G E T
Sbjct: 206 GYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFT 265
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++S+LNACA++G L G W+H Y+ + F+ NV V +ID+Y +CG +E A +VF+
Sbjct: 266 MVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCP 325
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF-KPDGVSFTGALTACSHAGLIEDGL 336
+R L WNSII+G A+NG EA E+F+ ++ KPD VSF G LTAC H G I
Sbjct: 326 RRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKAR 385
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
YF++M Y + P I+HY CIVD+ +AG LE+A +++ MP+KP+ ++ GSLL++CR
Sbjct: 386 DYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRK 445
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
++ +A R + + +L+P S YVL++N++AA K++ A + R MK +K+PG S
Sbjct: 446 HRNVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCS 505
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
SIE+ +HEF+AG R H +++ IY +L SF +
Sbjct: 506 SIELYGEVHEFIAGGRLHPKTQEIYHLLNDSSFAFQ 541
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 152/355 (42%), Gaps = 75/355 (21%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G+I A ++F MP + SW ++ F + + A+ F +M S ++P Y+T SV
Sbjct: 75 GNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVF 134
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL----------------------- 259
A A +G G +H V+K +++ +CNT+I +
Sbjct: 135 KAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYD 194
Query: 260 ------------YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
Y++CG I+ +R +F M RT VSWNS+I G+ NG + EALE FN M
Sbjct: 195 HDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKM 254
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
Q EGF+ + L AC+H G ++ G D +K+ + + I+D+Y + G
Sbjct: 255 QVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNH-FELNVIVVTAIIDMYCKCGS 313
Query: 368 LEDALNVVENMP-----------------------------------MKPNEVVLGSLLA 392
+E+A+ V E P +KP+ V +L
Sbjct: 314 VENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLT 373
Query: 393 ACRTKGDIILAE---RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
AC+ G I A LM +++P + +Y + ++ G + A ++ + M
Sbjct: 374 ACKHLGAINKARDYFELMMNKYEIEPSIK-HYTCIVDVLGQAGLLEEAEELIKGM 427
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 261 SRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT 320
S G I +A ++F RM L SWN+II F+ + A+ F M +P +++
Sbjct: 72 SPSGNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYP 131
Query: 321 GALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC--IVDLYSRAGRLEDALNVVENM 378
A + G G + + ++ ++ + + + C I+ +Y+ G + +A V +
Sbjct: 132 SVFKAYAQLGHAHYGAQ---LHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGK 188
Query: 379 PMK---PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
++ + V + S++ G+I + L D+ ++ + + Y GK
Sbjct: 189 KLELYDHDVVAINSMIMGYAKCGEIDESRNLFD---DMITRTSVSWNSMISGYVRNGKLM 245
Query: 436 GAGKIRRTMKGRGIQKK-----------PGLSSIEIGSGIHEFMAGDRSHIE 476
A ++ M+ G + L +++ G +H+++ R+H E
Sbjct: 246 EALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYI--KRNHFE 295
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/448 (38%), Positives = 268/448 (59%), Gaps = 3/448 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ +TS +S H + +A F+ G P+ + LS Q +G+++H
Sbjct: 85 ISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQ--RIGSVVH 142
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
GL+ + GLD + ++V AL+DMY + G+ + A VFD M VK TW +M+ GYM+ +
Sbjct: 143 GLIFRCGLD-SELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGV 201
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+SA+ F +MP++ +SWTAL+ G V+ +ALE F +M + G P+++TI+ VL+AC
Sbjct: 202 DSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSAC 261
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++G L +G IH Y K + N+ V N L+D+Y++ G I A VF+ + + +W
Sbjct: 262 ADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWT 321
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I F V G +A+E F M + G P+ V+F L+ACSHAGLI++G FD M+++
Sbjct: 322 TMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREV 381
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + PR+EHYGC+VDL R G LE+A ++++M ++P+ V+ SLL+AC G+ LAE
Sbjct: 382 YHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAEI 441
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
K ++ +PG D YVLL NMYA +W A +R+ M R I KKPG S IE+ +H
Sbjct: 442 AGKEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIEVDGVVH 501
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKL 493
EF+ D+SH IY LE+++ LK+
Sbjct: 502 EFLVEDKSHDARREIYVTLEIMARHLKM 529
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 136/328 (41%), Gaps = 69/328 (21%)
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y G A R+FDE+P D IS+T+L++ +K + +A+ F SG PD
Sbjct: 63 YAEFGRPADAGRLFDEIPHPDIISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAA 122
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+ L+A +G IG +H + + + VCN L+D+Y RCG E AR VF RM
Sbjct: 123 VGALSASGGLGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLV 182
Query: 279 RTLVSWNSIIVGFA--------------------------VNGFVG-----EALEYFNSM 307
+ V+W S++ G+ + G V +ALE F M
Sbjct: 183 KDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKM 242
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
EG +P+ ++ G L+AC+ G ++ G R + I ++D+Y+++G
Sbjct: 243 LLEGHRPNHITIVGVLSACADIGALDLG-RAIHGYGSKSNATTNIIVTNALMDMYAKSGS 301
Query: 368 LEDALNVVENMPMK----------------------------------PNEVVLGSLLAA 393
+ A +V E + MK PN V S+L+A
Sbjct: 302 IASAFSVFEEVQMKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSA 361
Query: 394 CRTKGDIILAERL---MKYLVDLDPGVD 418
C G I L M+ + +DP ++
Sbjct: 362 CSHAGLIQEGRELFDKMREVYHIDPRLE 389
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 123/258 (47%), Gaps = 40/258 (15%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
+ TV WT+ I+ H + + +A F +M L G PNHIT + +LS CAD + L LG
Sbjct: 213 MKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADIGA--LDLG 270
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHG K N++V AL+DMYAK G + A VF+ +++K +FTW MI +
Sbjct: 271 RAIHGYGSKSNAT-TNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMISSFTV 329
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+G NG +A+E F +M SG+ P+ VT +SV
Sbjct: 330 QG------------------------NG-------RKAVELFWDMLRSGILPNSVTFVSV 358
Query: 222 LNACANVGTLGIGLWIH---RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH- 277
L+AC++ G + G + R V D + C ++DL R G +E A + M
Sbjct: 359 LSACSHAGLIQEGRELFDKMREVYHIDPRLEHYGC--MVDLLGRGGLLEEAEALIDHMDV 416
Query: 278 KRTLVSWNSIIVGFAVNG 295
+ +V W S++ +G
Sbjct: 417 EPDIVIWRSLLSACLAHG 434
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 174/453 (38%), Positives = 267/453 (58%), Gaps = 5/453 (1%)
Query: 60 RIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVM 119
R+ E+ ++ M G P TF L C + LG IHG +G ++
Sbjct: 126 RLKESTEFYSLMRKEGVVPVSFTFTALFKACG--AKMDVGLGRQIHGQTILVGGFGEDLH 183
Query: 120 VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD 179
VG +++DMY K G ++ VFD M + +W +I Y++ G++ESA +FD +PV+D
Sbjct: 184 VGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVKD 243
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHR 239
++WT +++GF + EA+ F +MQ GVE D +T+I V++ACA +G WI
Sbjct: 244 MVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRD 303
Query: 240 YVLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
K +F K +V V + LID+YS+CG + A +VFQ M +R + S++S+I+GFA++G V
Sbjct: 304 VAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRV 363
Query: 298 GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC 357
+A++ F+ M K KP+ V+F G LTACSHAG++E G + F++M+K Y + P +HY C
Sbjct: 364 HDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTC 423
Query: 358 IVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGV 417
+VDL RAGRL++A +V+ MP++P+ V G+LL ACR +A +L +L+P
Sbjct: 424 MVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPYC 483
Query: 418 DSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG-IHEFMAGDRSHIE 476
NY+LLAN+YA+ G+W+ +R+ M+ RG++K P S IE G +HEF +GD +H
Sbjct: 484 IGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMTHPR 543
Query: 477 SEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
S I LE L L+ GY P + ND
Sbjct: 544 SGEIKQALEDLLDRLEAKGYQPHLSSVSYDVND 576
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 163/390 (41%), Gaps = 85/390 (21%)
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
+ +F+++ + + AL+ G++ +E+ E + M+ GV P T ++ AC
Sbjct: 100 LSIFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAK 159
Query: 229 GTLGIGLWIH-RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G+G IH + +L F +++ V N++ID+Y +CG +E R+VF M R ++SW +
Sbjct: 160 MDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTEL 219
Query: 288 I-------------------------------VGFAVNGFVGEALEYFNSMQKEGFKPDG 316
I GFA N EA+ +F MQ+ G + D
Sbjct: 220 ISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDE 279
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV-----DLYSRAGRLEDA 371
++ G ++AC+ G +Y D ++ + S + +V D+YS+ G + DA
Sbjct: 280 ITLIGVISACAQLG----AAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDA 335
Query: 372 LNVVENMP----------------------------------MKPNEVVLGSLLAACRTK 397
V + M +KPN V +L AC
Sbjct: 336 YRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHA 395
Query: 398 GDIILAER---LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPG 454
G + + LM+ + P D +Y + ++ G+ A ++ +TM I+ G
Sbjct: 396 GMVEQGWQIFELMEKCYGIKPSAD-HYTCMVDLLGRAGRLQEAHELVKTMP---IEPHGG 451
Query: 455 LSSIEIGS-GIHEFMAGDRSHIESEHIYSM 483
+ +G+ IH+ + D + I + H++ +
Sbjct: 452 VWGALLGACRIHK--SPDIAAIAANHLFEL 479
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 76/270 (28%)
Query: 45 TVQWTSSISRHCRSGRIA-------------------------------EAALEFTRMTL 73
+ WT IS + +SG + EA + F +M
Sbjct: 213 VISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQE 272
Query: 74 HGTNPNHITFITLLSGCADFPSQCLFLGAM-----IHGLVCKLGL-DRNNVMVGTALLDM 127
G + IT I ++S CA LGA I + K +++V+VG+AL+DM
Sbjct: 273 FGVETDEITLIGVISACAQ-------LGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDM 325
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y+K G + A VF M+ ++ +++++MI G+ G + A+++FDEM
Sbjct: 326 YSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEM------------ 373
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK-QDF 246
VK + ++P+ VT I VL AC++ G + G I + K
Sbjct: 374 ---VK----------------TEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGI 414
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
K + ++DL R G ++ A ++ + M
Sbjct: 415 KPSADHYTCMVDLLGRAGRLQEAHELVKTM 444
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 69/164 (42%), Gaps = 5/164 (3%)
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI--EFARQVFQR 275
I++ L+ C N+ + +H +L + V LI ++ + +F +
Sbjct: 49 IVTTLDGCKNLTQIK---QVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQ 105
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
++ +N++I G+ + + E+ E+++ M+KEG P +FT AC + G
Sbjct: 106 VNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLG 165
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
+ + + ++D+Y + G LE V + MP
Sbjct: 166 RQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMP 209
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 166/414 (40%), Positives = 265/414 (64%), Gaps = 7/414 (1%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
+A + + +M G PN++TF L+ GC+ +G +IH V K G N+V VG
Sbjct: 111 KALMLYKQMLNKGIVPNNLTFPFLVKGCSRLQYGGT-VGEVIHAHVLKFGF-LNDVFVGN 168
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
+L+ ++ FG A VFD M V+ +WN+M+ GY+R G++E A+ +F +M R+ I+
Sbjct: 169 SLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIIT 228
Query: 183 WTALLNGFVKRGYFEEALECFREMQ-ISG---VEPDYVTIISVLNACANVGTLGIGLWIH 238
W +++ G V+ G+ +E+LE F EMQ +SG V+PD +TI SVL+ACA +G++ G W+H
Sbjct: 229 WNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVH 288
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
Y+ K D + +V + L+++Y +CG ++ A ++F M ++ +W ++I FA++GF
Sbjct: 289 AYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGK 348
Query: 299 EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCI 358
+A + F M+K G KP+ V+F G L+ACSH+GL+E G FD+MK++Y + P+I HY C+
Sbjct: 349 KAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACM 408
Query: 359 VDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD 418
VD+ SRA ++AL ++ +MPMKP+ V G+LL C+ G+I L E++ YL+DL+P
Sbjct: 409 VDILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLIDLEPHNH 468
Query: 419 SNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK-PGLSSIEIGSGIHEFMAGD 471
+ Y+ L ++Y GK+D A +IR +MK RGI+ K PG S IEI + EF G+
Sbjct: 469 AFYINLCDIYVKAGKYDAAKRIRNSMKERGIETKIPGCSIIEINGVVQEFSVGE 522
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 130/307 (42%), Gaps = 83/307 (27%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMT----------------------------- 72
V V W S + + R+G + A F +M
Sbjct: 192 VRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHE 251
Query: 73 ---LHGTN---PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRN----NVMVGT 122
L G + P+ IT ++LS CA LG++ HG L +N +V++GT
Sbjct: 252 MQFLSGDDVVKPDKITIASVLSACA-------LLGSIDHGKWVHAYLRKNDIECDVVIGT 304
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
AL++MY K G + A +F+ M K + W AMI
Sbjct: 305 ALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMI-------------------------- 338
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
+ F G+ ++A +CF EM+ +GV+P++VT + +L+AC++ G + G V+
Sbjct: 339 -----SVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFD-VM 392
Query: 243 KQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFV-- 297
K+ + ++ + ++D+ SR + A + + M K + W +++ G ++G +
Sbjct: 393 KRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQMHGNIKL 452
Query: 298 GEALEYF 304
GE + ++
Sbjct: 453 GEKVAHY 459
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WT+ IS G +A F M G PNH+TF+ LLS C+ G + G
Sbjct: 334 WTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSH-------SGLVEQGR 386
Query: 108 VCKLGLDR-----NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS-FTWNAMIDGYMR 161
C + R + ++D+ ++ D A + +M +K + W A++ G
Sbjct: 387 CCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQM 446
Query: 162 RGDI---ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
G+I E ++ + + L + +VK G ++ A M+ G+E
Sbjct: 447 HGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGIE 500
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 183/485 (37%), Positives = 274/485 (56%), Gaps = 20/485 (4%)
Query: 14 FLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTL 73
FLP N + + + + S ST+ W I H RS A++ F +M L
Sbjct: 64 FLPSGSNSSAHHLLSAHYVFKDIQSPSTI----LWNQMIRAHARSQTPAKSIQFFNQMLL 119
Query: 74 HGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF-- 131
+ P+ T+ LL+ C S L G +H V G +NV + + L++ YA
Sbjct: 120 TDSRPDAHTYSFLLAACTS--SLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVG 177
Query: 132 ---GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLN 188
+ A VFD M ++ WN+M+ GYMRRG+++ A R+F EMP R+ +SWT +++
Sbjct: 178 GEGAALASARKVFDDMSERNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMIS 237
Query: 189 GFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD 248
G+ K G ++AL F +M+ +GVE D V +++ L ACA +G L +G+WIH Y+
Sbjct: 238 GYAKNGKCKQALNLFDQMRKAGVELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGS 297
Query: 249 NVKVC----NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
N +V N LI +Y+ CG I+ A +VF+ M +R+ VSW S+I FA G+ LE F
Sbjct: 298 NQRVLVSLNNALIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIF 357
Query: 305 NSMQKEG---FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
SMQ+ G +PDG++F G L ACSHAGL+++G + F M + + + PRIEHYGC+VDL
Sbjct: 358 RSMQRLGTSEARPDGITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCMVDL 417
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV-DLDPGVDSN 420
SRAG L++A ++ MP+KPN V G+LL CR + LA + + LV + DP +
Sbjct: 418 LSRAGFLDEAQELIATMPVKPNNAVWGALLGGCRFYRNAELASLVSQKLVAEPDPDKAAG 477
Query: 421 YV-LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEH 479
Y+ LLA +YA+ KW +R+ M G++K G S ++I H+ +AGDR+H +
Sbjct: 478 YLSLLAQVYASAEKWQDVATVRQKMVAMGVKKPAGQSWVQINEVFHDSVAGDRTHENTSS 537
Query: 480 IYSML 484
IY ML
Sbjct: 538 IYEML 542
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 168/455 (36%), Positives = 270/455 (59%), Gaps = 7/455 (1%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTN---PNHITFITLLSGCADFPSQCLFLGAMIH 105
S I HC+S + E + +F R L N P++ T L+ C + G +H
Sbjct: 75 NSMIRAHCKSP-VPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMR--ETGLQVH 131
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G+ + G D N+ V T L+ +YA+ G +D VF+++ AM+ R GD+
Sbjct: 132 GMTIRRGFD-NDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDV 190
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A ++F+ MP RD I+W A+++G+ + G EAL F MQ+ GV+ + V +ISVL+AC
Sbjct: 191 VFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSAC 250
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+G L G W H Y+ + K V++ TL+DLY++CG +E A +VF M ++ + +W+
Sbjct: 251 TQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWS 310
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S + G A+NGF + LE F+ M+++G P+ V+F L CS G +++G R+FD M+
Sbjct: 311 SALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNE 370
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ + P++EHYGC+VDLY+RAGRLEDA+++++ MPMKP+ V SLL A R ++ L
Sbjct: 371 FGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVL 430
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
K +++L+ YVLL+N+YA WD +R++MK +G++K+PG S +E+ +H
Sbjct: 431 ASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVH 490
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
EF GD+SH + I ++ + +S L+L GY +T
Sbjct: 491 EFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADT 525
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 183/524 (34%), Positives = 280/524 (53%), Gaps = 71/524 (13%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W S I+ H + G A F M G P+ ITF ++L GC + + L LG IH
Sbjct: 553 ISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKN--PEALELGRQIH 610
Query: 106 GLVCKLGLD------------------------------RNNVMVGTALLDMYAKFGRMD 135
L+ + GL NVM TA++ +A G
Sbjct: 611 MLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDR 670
Query: 136 LATVVFDAMR------VKSSFT---------------------------------WNAMI 156
A +F M+ VKS+F+ NA+I
Sbjct: 671 KAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALI 730
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
Y + G + A ++FD+MP RD +SW ++ G+ + G AL+ +MQ GV +
Sbjct: 731 SAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKF 790
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+ +S+LNAC++ L G +H ++K+ + +V+V LI +Y++CG +E A++VF
Sbjct: 791 SFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNF 850
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
++ +V+WN++I +A +G +AL++FN M KEG KPDG +FT L+AC+H+GL+ +G
Sbjct: 851 TEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGN 910
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
R F ++ + +SP IEHYGC+V L RAGR ++A ++ MP P+ V +LL ACR
Sbjct: 911 RIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRI 970
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
G++ LAE + L+ + YVLL+N+YAA G+WD KIRR M+GRGI+K+PG S
Sbjct: 971 HGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRS 1030
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IE+ + IHEF+A DRSH E+ IY L+ LS +++ GY P+T
Sbjct: 1031 WIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDT 1074
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 201/442 (45%), Gaps = 76/442 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + I+ + G EA ++ +M G N T++++L+ C+ S+ L G +IH
Sbjct: 351 VVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACS--TSKALGAGELIH 408
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ ++G ++V +G +L+ MYA R GD+
Sbjct: 409 SHISEVG-HSSDVQIGNSLISMYA-------------------------------RCGDL 436
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +F+ MP RD ISW A++ G+ +R EA++ +++MQ GV+P VT + +L+AC
Sbjct: 437 PRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSAC 496
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
N G IH +L+ K N + N L+++Y RCG I A+ VF+ R ++SWN
Sbjct: 497 TNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWN 556
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S+I G A +G A + F M+KEG +PD ++F L C + +E G R ++
Sbjct: 557 SMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELG-RQIHMLIIE 615
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNV------------------------------- 374
+ + ++++Y R G L+DA V
Sbjct: 616 SGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFEL 675
Query: 375 ---VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV----DLDPGVDSNYVLLANM 427
++N KP + S+L AC + + ++++ +++ +LD GV + L +
Sbjct: 676 FWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGN---ALISA 732
Query: 428 YAAVGKWDGAGKIRRTMKGRGI 449
Y+ G A K+ M R I
Sbjct: 733 YSKSGSMTDARKVFDKMPNRDI 754
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 167/348 (47%), Gaps = 41/348 (11%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W + I+ + R EA + +M G P +TF+ LLS C + S G MIH
Sbjct: 452 ISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTN--SSAYSDGKMIH 509
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + G+ N + NA+++ Y R G I
Sbjct: 510 EDILRSGIKSNGHLA--------------------------------NALMNMYRRCGSI 537
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +F+ RD ISW +++ G + G +E A + F EM+ G+EPD +T SVL C
Sbjct: 538 MEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGC 597
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
N L +G IH +++ + +V + N LI++Y RCG ++ A +VF + R ++SW
Sbjct: 598 KNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWT 657
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF-DIMKK 344
++I GFA G +A E F MQ +GFKP +F+ L AC + +++G + I+
Sbjct: 658 AMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNS 717
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP----MKPNEVVLG 388
Y + + + ++ YS++G + DA V + MP M N+++ G
Sbjct: 718 GYELDTGVGN--ALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAG 763
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 204/440 (46%), Gaps = 72/440 (16%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + + + + + E F +M+ G P+ +T+I LL PS L G IH
Sbjct: 250 VSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTT-PSM-LDEGKRIH 307
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L GL+ +++ VGTAL M+ +R GD+
Sbjct: 308 KLAVNEGLN-SDIRVGTALATMF-------------------------------VRCGDV 335
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A + + RD + + AL+ + G++EEA E + +M+ GV + T +SVLNAC
Sbjct: 336 AGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNAC 395
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ LG G IH ++ + +V++ N+LI +Y+RCG + AR++F M KR L+SWN
Sbjct: 396 STSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWN 455
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKK 344
+II G+A GEA++ + MQ EG KP V+F L+AC+++ DG + + DI++
Sbjct: 456 AIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS 515
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN--------------------------- 377
+ + + + ++++Y R G + +A NV E
Sbjct: 516 GIKSNGHLAN--ALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYK 573
Query: 378 --MPMK-----PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-VLLANMYA 429
+ MK P+++ S+L C+ + L ++ +++ +D N L NMY
Sbjct: 574 LFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYI 633
Query: 430 AVGKWDGAGKIRRTMKGRGI 449
G A ++ +++ R +
Sbjct: 634 RCGSLQDAYEVFHSLRHRNV 653
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 113/188 (60%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F N +I+ Y++ + A ++F +MP RD ISW +L++ + ++G+ ++A + F EMQ +
Sbjct: 118 FLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTA 177
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G P +T IS+L AC + L G IH +++ ++ + +V N+L+++Y +C + A
Sbjct: 178 GFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSA 237
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
RQVF +++R +VS+N+++ +A +V E + F M EG PD V++ L A +
Sbjct: 238 RQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTP 297
Query: 330 GLIEDGLR 337
++++G R
Sbjct: 298 SMLDEGKR 305
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 160/365 (43%), Gaps = 36/365 (9%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W S IS + + G +A F M G P+ IT+I++L+ C P++ L G IH
Sbjct: 149 ISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCS-PAE-LEYGKKIH 206
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + G R + V +LL+MY K + A VF + + ++N M+ Y ++ +
Sbjct: 207 SKIIEAGYQR-DPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYV 265
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E + +F +M G+ PD VT I++L+A
Sbjct: 266 EECIGLFGQMSSE-------------------------------GIPPDKVTYINLLDAF 294
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
L G IH+ + + +++V L ++ RCG + A+Q + R +V +N
Sbjct: 295 TTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYN 354
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I A +G EA E + M+ +G + ++ L ACS + + G + ++
Sbjct: 355 ALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEV 414
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
S ++ ++ +Y+R G L A + MP K + + +++A + D A +
Sbjct: 415 GH-SSDVQIGNSLISMYARCGDLPRARELFNTMP-KRDLISWNAIIAGYARREDRGEAMK 472
Query: 406 LMKYL 410
L K +
Sbjct: 473 LYKQM 477
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
E + + ++ C +L IH +++ ++ + N LI++Y +C + A
Sbjct: 78 TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAH 137
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
QVF +M +R ++SWNS+I +A GF +A + F MQ GF P +++ LTAC
Sbjct: 138 QVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPA 197
Query: 331 LIEDGLR-YFDIMKKIYRVSPRIEH-----------------------------YGCIVD 360
+E G + + I++ Y+ PR+++ Y ++
Sbjct: 198 ELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLG 257
Query: 361 LYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGV 417
LY++ +E+ + + M + P++V +LL A T + +R+ K V + G+
Sbjct: 258 LYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAV--NEGL 315
Query: 418 DSNY---VLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+S+ LA M+ G GA + R +
Sbjct: 316 NSDIRVGTALATMFVRCGDVAGAKQALEAFADRDV 350
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 166/463 (35%), Positives = 267/463 (57%), Gaps = 5/463 (1%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T P + W + IS + G +A F +M L G + T+ +++S CAD L
Sbjct: 250 TEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACAD--GGFFLL 307
Query: 101 GAMIHGLVCK--LGLDRNNVM-VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
G +H + K L DR+ ++ VG L+ +Y K+G++D A +F M VK TWN ++
Sbjct: 308 GKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLS 367
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GY+ G +E A F +MP ++ ++WT +++G + G+ E+AL+ F +M++ G EP+
Sbjct: 368 GYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYA 427
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+ AC+ +G L G +H ++ + V N +I +Y+RCG +E AR +F M
Sbjct: 428 FAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMP 487
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
VSWNS+I +G +A+E + M KEG PD +F L+ACSHAGL+E+G R
Sbjct: 488 FVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNR 547
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF+ M + Y ++P +HY ++DL+ RAG+ DA NV+++MP + + +LLA CRT
Sbjct: 548 YFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTH 607
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G++ L + L L P D YVLL+NMYA++G+W+ + R+ M+ RG++K+P S
Sbjct: 608 GNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSW 667
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
E+ + +H F+ D H E IY+ LE L+ ++K GY+P+T
Sbjct: 668 TEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDT 710
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 204/433 (47%), Gaps = 76/433 (17%)
Query: 36 NNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADF-- 93
N + + TV + + I+ + A F M P+ TF ++LS
Sbjct: 103 NETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFY 162
Query: 94 -PSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR---------MDLATVVFDA 143
QC +HG V K G++ ++ ALL +Y K M A +FD
Sbjct: 163 DERQC----GQMHGTVVKFGIEIFPAVL-NALLSVYVKCASSPLVSSSSLMASARKLFDE 217
Query: 144 MRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF 203
M ++ F W +I GY+R GD+ A + D M + I+W A+++G++ G FE+AL F
Sbjct: 218 MPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLF 277
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN----VKVCNTLIDL 259
R+M++ GV+ D T SV++ACA+ G +G +H Y+LK + + + V NTLI L
Sbjct: 278 RKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITL 337
Query: 260 YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF---------------------------- 291
Y + G ++ AR++F M + +++WN+++ G+
Sbjct: 338 YWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMI 397
Query: 292 ---AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
A NGF +AL+ FN M+ +G++P+ +F GA+TACS G +E+G ++
Sbjct: 398 SGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENG----------RQL 447
Query: 349 SPRIEHYG---------CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
+I H G ++ +Y+R G +E A + MP + V S++AA G
Sbjct: 448 HAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPF-VDPVSWNSMIAALGQHGH 506
Query: 400 ----IILAERLMK 408
I L E+++K
Sbjct: 507 GVKAIELYEQMLK 519
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 160/385 (41%), Gaps = 57/385 (14%)
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
L +HG V G +V L+D+Y K A +FD + +I Y
Sbjct: 31 LARTVHGHVIASGFKLRGHIVNR-LIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAY 89
Query: 160 MRRGDIESAVRMFDEMPV--RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
G+++ A +F+E P+ RD + + A++ G+ A+E FR M+ + +PD T
Sbjct: 90 SALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFT 149
Query: 218 IISVLNACANV--GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG---------CI 266
SVL+A + G +H V+K + V N L+ +Y +C +
Sbjct: 150 FASVLSASTLIFYDERQCGQ-MHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLM 208
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
AR++F M KR W ++I G+ NG + A E ++M ++ G+++ ++
Sbjct: 209 ASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQ----PGIAWNAMISGY 264
Query: 327 SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVV 386
H GL ED L F M+ + G VD E
Sbjct: 265 LHHGLFEDALTLFRKMRLL----------GVQVD-----------------------EST 291
Query: 387 LGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL-----LANMYAAVGKWDGAGKIR 441
S+++AC G +L +++ Y++ + D +++L L +Y GK DGA KI
Sbjct: 292 YTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIF 351
Query: 442 RTMKGRGIQKKPGLSSIEIGSGIHE 466
M + I L S + +G E
Sbjct: 352 YEMPVKDIITWNTLLSGYVNAGRME 376
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 113/277 (40%), Gaps = 56/277 (20%)
Query: 222 LNACA--NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL-------------------- 259
LN C N+ + + +H +V+ FK + N LID+
Sbjct: 18 LNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQP 77
Query: 260 -----------YSRCGCIEFARQVFQR--MHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
YS G ++ AR++F + R V +N++I G++ A+E F +
Sbjct: 78 DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRA 137
Query: 307 MQKEGFKPDGVSFTGALTACS------------HAGLIEDGLRYFD-IMKKIYRVSPRIE 353
M+ F+PD +F L+A + H +++ G+ F ++ + V +
Sbjct: 138 MRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKC- 196
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
L S + + A + + MP K NE + +L+ GD+ A ++ + +
Sbjct: 197 ---ASSPLVSSSSLMASARKLFDEMP-KRNEFIWTTLITGYVRNGDLTGAREILDTMTE- 251
Query: 414 DPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
PG+ N ++ + Y G ++ A + R M+ G+Q
Sbjct: 252 QPGIAWNAMI--SGYLHHGLFEDALTLFRKMRLLGVQ 286
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 167/435 (38%), Positives = 263/435 (60%), Gaps = 4/435 (0%)
Query: 66 LEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALL 125
L + RM N TF LL C++ + IH + K G +++ +L+
Sbjct: 96 LLYHRMLCCSAPHNAYTFPFLLKACSNLSA--FQETTQIHAHITKFGYG-HDIYAVNSLI 152
Query: 126 DMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD-AISWT 184
+ YA G A ++FD ++ + +WN++I GY++ G+++ A+ +F +MP ++ AISWT
Sbjct: 153 NSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNNAISWT 212
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
+++G+V+ G +EAL+ F EMQ S V PD V++ S L+AC+ +G L G WIH Y K
Sbjct: 213 TMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKT 272
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
+ + +C LID+Y++CG +E A VF+ M +++ W ++I G+A +G EA+ F
Sbjct: 273 RTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGREAISKF 332
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
MQ G KP+ ++FT LTACS+ GL+E+G F+ +++ Y + P IEHYGC+VDL R
Sbjct: 333 LEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGR 392
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLL 424
AG L +A ++ MP+KPN V+ GSLL AC+ +I L E++ + L+++D YV +
Sbjct: 393 AGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEILIEMDSNHGGRYVHM 452
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
AN++A KWD A + RR M+ +G+ K PG S+I + HEF+AGDRSH E + I +
Sbjct: 453 ANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTTHEFLAGDRSHAEIQEIRTKW 512
Query: 485 ELLSFDLKLCGYVPE 499
+ L+ GYVPE
Sbjct: 513 RFVRRKLEENGYVPE 527
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 37/241 (15%)
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIH 238
D W ++ G + +L + M + T +L AC+N+ IH
Sbjct: 74 DTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIH 133
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA------ 292
++ K + ++ N+LI+ Y+ G + A +F R+ + VSWNS+I G+
Sbjct: 134 AHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMD 193
Query: 293 ---------------------VNGFV-----GEALEYFNSMQKEGFKPDGVSFTGALTAC 326
++G+V EAL+ F+ MQ PD VS AL+AC
Sbjct: 194 MALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSAC 253
Query: 327 SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC--IVDLYSRAGRLEDALNVVENMPMKPNE 384
S G +E G K RI+ C ++D+Y++ G +E+AL V +NM K +
Sbjct: 254 SQLGALEQGKWIHSYANK---TRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQ 310
Query: 385 V 385
V
Sbjct: 311 V 311
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 166/426 (38%), Positives = 256/426 (60%), Gaps = 13/426 (3%)
Query: 86 LLSGCADFPSQCLFLGAMIHGLV-------CKLGLDR---NNVMVGTALLDMYAKFGRMD 135
L S C+D + AMI G V ++ DR +V+ +++ YA G++D
Sbjct: 57 LFSLCSD--RDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKID 114
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
A +FD M ++ +WN+M+ G+++ G++E A +F EMP RD +SW ++L + + G
Sbjct: 115 EAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGK 174
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
EAL F +M+ GV+P T++S+L+ACA++G L GL +H Y+ + N V
Sbjct: 175 PNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTA 234
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
L+D+Y++CG I A QVF M + +++WN+II G A++G V EA + F M++ +P+
Sbjct: 235 LVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPN 294
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
++F L+ACSHAG++++G + D M Y + P++EHY C++DL +RAG LE+A+ ++
Sbjct: 295 DITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELI 354
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
MPM+PN LG+LL CR G+ L E + K L++L P Y+LL+N+YAA KWD
Sbjct: 355 GTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWD 414
Query: 436 GAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK-LC 494
A K+R MK GI K PG+S IE+ +H F+AGD SH ES IY L + LK
Sbjct: 415 DARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLKSAI 474
Query: 495 GYVPET 500
GY +T
Sbjct: 475 GYSADT 480
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 114/237 (48%), Gaps = 43/237 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S ++ + + G+ EA F +M G P T ++LLS CA LGA+
Sbjct: 159 VVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACA-------HLGALD 211
Query: 105 HGLVCKLGLDRN----NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
GL ++ N N +VGTAL+DMYAK G++ LAT VF+AM K WN +I G
Sbjct: 212 KGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMA 271
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
++G VK EA + F+EM+ + VEP+ +T ++
Sbjct: 272 --------------------------IHGHVK-----EAQQLFKEMKEASVEPNDITFVA 300
Query: 221 VLNACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+L+AC++ G + G + + + V+ + +IDL +R G +E A ++ M
Sbjct: 301 MLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTM 357
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 267/441 (60%), Gaps = 15/441 (3%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ RM PN T+ L+ GCA S+ L G +HG V G NV V T+L+++
Sbjct: 18 YNRMVEAEAEPNEFTYSFLIGGCA--RSRLLREGEQVHGRVVANGYC-TNVFVRTSLVNL 74
Query: 128 YAKFGRMD---LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWT 184
YA G D A VFD + ++ +WN+++ GY+R GD++ A R+FDEMP R+ +SWT
Sbjct: 75 YAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWT 134
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
++ G + G ++AL F EM+ +GV+ D V +++ L+ACA +G L +G WIH Y+ ++
Sbjct: 135 TMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDER 194
Query: 245 DFKDN----VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
N V + N+LI +Y+ CG I+ A +VF M +R+ +SW S+I GFA G EA
Sbjct: 195 LHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEA 254
Query: 301 LEYFNSMQKEGF---KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC 357
L F MQ+ G +PDG++F G L ACSHAG ++ G +F+ M K + + PRIEHYGC
Sbjct: 255 LGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGC 314
Query: 358 IVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL-VDLDPG 416
+VDL SRAG L++A ++E+MPMKPN+ V G+LL CR + LA + + L ++L P
Sbjct: 315 MVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELASHVAQKLALELKPD 374
Query: 417 VDSNY-VLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
+ Y VLL+N+YA +W +R+ M G++K G S ++I +H+F+AGD +H
Sbjct: 375 QAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQINGVVHDFVAGDWTHK 434
Query: 476 ESEHIYSMLELLSFDLKLCGY 496
+ +Y ML ++ KL GY
Sbjct: 435 HASSVYEMLSKITRQAKLEGY 455
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 74/273 (27%)
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL 259
+E + M + EP+ T ++ CA L G +H V+ + NV V +L++L
Sbjct: 15 VELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANGYCTNVFVRTSLVNL 74
Query: 260 YS----------------------------------RCGCIEFARQVFQRMHKRTLVSWN 285
Y+ RCG ++ AR++F M +R +VSW
Sbjct: 75 YAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWT 134
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL---RYFD-- 340
++I G A G +AL F+ M++ G K D V+ AL+AC+ G ++ G Y D
Sbjct: 135 TMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDER 194
Query: 341 ------------------------IMKKIYRVSPRIEH-----YGCIVDLYSRAGRLEDA 371
++ K Y+V ++ + ++ +++ G E+A
Sbjct: 195 LHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEA 254
Query: 372 LNVVENMPM------KPNEVVLGSLLAACRTKG 398
L V + M +P+ + +L AC G
Sbjct: 255 LGVFQWMQRLGTDEGRPDGITFIGVLCACSHAG 287
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTN---PNHITFITLLSGCADFPSQCLFLG 101
T+ WTS I+ + G EA F M GT+ P+ ITFI +L C S F+
Sbjct: 235 TISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCAC----SHAGFVD 290
Query: 102 AMIHGLVC---KLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMID 157
H C K G+ G ++D+ ++ G +D A + ++M +K + W A++
Sbjct: 291 QGRHFFECMNKKWGIVPRIEHYG-CMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLG 349
Query: 158 G 158
G
Sbjct: 350 G 350
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 177/455 (38%), Positives = 264/455 (58%), Gaps = 34/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ WT+ I +SG AEA F M G PN +T+ ++L+ C+ P+ L G IH
Sbjct: 513 ISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSS-PA-ALDWGRRIH 570
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + GL + V L++MY+ G +
Sbjct: 571 QQVIEAGL-ATDAHVANTLVNMYSMCG-------------------------------SV 598
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A ++FD M RD +++ A++ G+ +EAL+ F +Q G++PD VT I++LNAC
Sbjct: 599 KDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNAC 658
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN G+L IH VLK + + + N L+ Y++CG A VF +M KR ++SWN
Sbjct: 659 ANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWN 718
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+II G A +G + L+ F M+ EG KPD V+F L+ACSHAGL+E+G RYF M +
Sbjct: 719 AIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRD 778
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ ++P IEHYGC+VDL RAG+L++ +++ MP + N + G+LL ACR G++ +AER
Sbjct: 779 FGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAER 838
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ + LDP + YV L++MYAA G WD A K+R+ M+ RG+ K+PG S IE+G +H
Sbjct: 839 AAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLH 898
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F+A DRSH ESE IY+ L+ L+ +K+ GYVP+T
Sbjct: 899 YFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDT 933
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/442 (30%), Positives = 209/442 (47%), Gaps = 85/442 (19%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W + I G EA+ + +M G PN IT++ LL+ C + P+ L G IH
Sbjct: 412 IAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVN-PT-ALHWGREIH 469
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V K G + D+ + NA+I Y R G I
Sbjct: 470 SRVVKDGF----------MFDISVQ----------------------NALISMYARCGSI 497
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A +F++M +D ISWTA++ G K G EAL F++MQ +G++P+ VT S+LNAC
Sbjct: 498 KDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNAC 557
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++ L G IH+ V++ + V NTL+++YS CG ++ ARQVF RM +R +V++N
Sbjct: 558 SSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYN 617
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE------------ 333
++I G+A + EAL+ F+ +Q+EG KPD V++ L AC+++G +E
Sbjct: 618 AMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKD 677
Query: 334 -----------------------DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
D L FD M K +S + I+ ++ GR +D
Sbjct: 678 GYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVIS-----WNAIIGGCAQHGRGQD 732
Query: 371 ALNVVENMPM---KPNEVVLGSLLAACRTKGDIILAERLMKYLVDL--DPGVD---SNYV 422
L + E M M KP+ V SLL+AC G L E +Y + D G+ +Y
Sbjct: 733 VLQLFERMKMEGIKPDIVTFVSLLSACSHAG---LLEEGRRYFCSMSRDFGITPTIEHYG 789
Query: 423 LLANMYAAVGKWDGAGKIRRTM 444
+ ++ G+ D + +TM
Sbjct: 790 CMVDLLGRAGQLDEVEALIKTM 811
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 172/346 (49%), Gaps = 41/346 (11%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSGCADFPSQC 97
K V WT I + G +E A E F +M G PN IT+I +L+ + P+
Sbjct: 304 KMETKSVVSWTIIIGGYADCGH-SEIAFEIFQKMQQEGVVPNRITYINVLNAFSG-PA-A 360
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L G +H + G + +++ VGTAL+ MYAK G
Sbjct: 361 LKWGKTVHSHILNAGHE-SDLAVGTALVKMYAKCG------------------------- 394
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
+ ++F+++ RD I+W ++ G + G +EEA E + +MQ G+ P+ +T
Sbjct: 395 ------SYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKIT 448
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+ +LNAC N L G IH V+K F ++ V N LI +Y+RCG I+ AR +F +M
Sbjct: 449 YVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMV 508
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
++ ++SW ++I G A +G EAL F MQ+ G KP+ V++T L ACS ++ G R
Sbjct: 509 RKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRR 568
Query: 338 YFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMK 381
I +++ + + +V++YS G ++DA V + M +
Sbjct: 569 ---IHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQR 611
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 206/457 (45%), Gaps = 77/457 (16%)
Query: 30 QISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSG 89
Q+ + N+++ TV+ W + + + + G I EA M HG T + LLS
Sbjct: 197 QVWNKLNHTERTVHS---WNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSS 253
Query: 90 CADFPSQCLFLGAMIH--GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK 147
C PS L G IH + +L D N V +L+MYAK G
Sbjct: 254 CKS-PS-ALECGREIHVEAMKARLLFDVN---VANCILNMYAKCG--------------- 293
Query: 148 SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ 207
I A +FD+M + +SWT ++ G+ G+ E A E F++MQ
Sbjct: 294 ----------------SIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQ 337
Query: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267
GV P+ +T I+VLNA + L G +H ++L + ++ V L+ +Y++CG +
Sbjct: 338 QEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYK 397
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
RQVF+++ R L++WN++I G A G EA E ++ MQ+EG P+ +++ L AC
Sbjct: 398 DCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACV 457
Query: 328 -----------HAGLIEDGLRYFDI-----MKKIYR---------------VSPRIEHYG 356
H+ +++DG FDI + +Y V I +
Sbjct: 458 NPTALHWGREIHSRVVKDGF-MFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWT 516
Query: 357 CIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
++ +++G +AL V ++M +KPN V S+L AC + + R+ + +++
Sbjct: 517 AMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEA 576
Query: 414 DPGVDSNYV-LLANMYAAVGKWDGAGKIRRTMKGRGI 449
D++ L NMY+ G A ++ M R I
Sbjct: 577 GLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDI 613
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 127/236 (53%), Gaps = 5/236 (2%)
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEM--PVRDAISWTALLNGFVKRGYFEEALECF 203
V +T NA+I+ Y++ G IE A ++++++ R SW A++ G+V+ GY EEAL+
Sbjct: 173 VLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLL 232
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
REMQ G+ T + +L++C + L G IH +K +V V N ++++Y++C
Sbjct: 233 REMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKC 292
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
G I AR+VF +M +++VSW II G+A G A E F MQ+EG P+ +++ L
Sbjct: 293 GSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVL 352
Query: 324 TACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
A S ++ G + I+ + + +V +Y++ G +D V E +
Sbjct: 353 NAFSGPAALKWGKTVHSHILNAGHESDLAVG--TALVKMYAKCGSYKDCRQVFEKL 406
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 95/187 (50%), Gaps = 3/187 (1%)
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
+ A++ + +Q G + + +L C V L G +H ++++ + N L
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 257 IDLYSRCGCIEFARQVFQRMH--KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
I++Y +CG IE ARQV+ +++ +RT+ SWN+++VG+ G++ EAL+ MQ+ G
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
+ L++C +E G R + R+ + CI+++Y++ G + +A V
Sbjct: 243 GRATTMRLLSSCKSPSALECG-REIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREV 301
Query: 375 VENMPMK 381
+ M K
Sbjct: 302 FDKMETK 308
>gi|357496515|ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493561|gb|AES74764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 637
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 178/466 (38%), Positives = 284/466 (60%), Gaps = 12/466 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V +T+ I RHC E+ F +M + + + L+ CA +G+ +
Sbjct: 90 SVDYTALI-RHCPP---FESLKLFIQMRQFDLPLDGVVMVCALNACARLGGGDTKVGSQM 145
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V K G + + V AL+++Y KFG + A +F+ + V+S +W+ ++G ++
Sbjct: 146 HVGVVKFGFVKFD-KVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWES 204
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLN 223
+ES +FDEMP R+ ++WT ++ G+V G+ +EA +EM G +VT+ SVL+
Sbjct: 205 VESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLS 264
Query: 224 ACANVGTLGIGLWIHRYVLKQ---DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
AC+ G + +G W+H Y +K+ DF V V +L+D+Y++CG I A VF+ M KR
Sbjct: 265 ACSQSGDVCVGRWVHCYAVKEMGLDF--GVMVGTSLVDMYAKCGRINAALSVFRSMLKRN 322
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+V+WN+++ G A++G A++ F SM +E KPDGV+F L+ACSH+GL+E G YF
Sbjct: 323 VVAWNAMLGGLAMHGMGKIAVDMFPSMVEE-VKPDGVTFMALLSACSHSGLVEKGWDYFH 381
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
++ +YR+ P IEHY C+V L RAGRLE+A +V+NM + PNEVVLGSL+ +C G +
Sbjct: 382 DLEPVYRIKPEIEHYACMVGLLGRAGRLEEAEIMVKNMRIPPNEVVLGSLIGSCYAHGRL 441
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E++M+ L+++DP +++L+NMYA GK + A +R+ +K RGI+K PG+SSI +
Sbjct: 442 QLGEKIMRDLLEMDPLNTEYHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSIYV 501
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELY 506
+H+F+AGD+SH + IY L+ + L+ GYVP T L+
Sbjct: 502 DGKLHQFIAGDKSHTRTSEIYMKLDEMICRLRSAGYVPNTSCQVLF 547
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 179/466 (38%), Positives = 269/466 (57%), Gaps = 11/466 (2%)
Query: 43 NPTVQWTSSI----SRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
NP+ +SI +RH + RM G ++ T +L CAD C+
Sbjct: 140 NPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCM 199
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G +HG ++GL+ + VG +L+DMY K G + A +FD M V+ +WNA+I G
Sbjct: 200 --GRCVHGQGLRVGLE-GDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAG 256
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE--PDYV 216
YM+ G+I A +F+ M R+ +SWTA+++G+ + G+ E+AL F EM G E P++V
Sbjct: 257 YMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWV 316
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
TI+SVL ACA L G IH + N V L +Y++C + AR F +
Sbjct: 317 TIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMI 376
Query: 277 HK--RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
+ + L++WN++I +A +G EA+ F +M + G +PD V+F G L+ CSH+GLI+
Sbjct: 377 AQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDA 436
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
GL +F+ M I+ V PR+EHY C+VDL RAGRL +A ++ MPM+ V G+LLAAC
Sbjct: 437 GLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAAC 496
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPG 454
R+ ++ +AE + L L+P NYVLL+N+YA G W+ K+R +K +G++K PG
Sbjct: 497 RSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPG 556
Query: 455 LSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
S IEI H FM D+SH +++ IY LE L +K+ GY+P+T
Sbjct: 557 CSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDT 602
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 137/306 (44%), Gaps = 40/306 (13%)
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
+ K G+ A +V ++ ++F M+ Y GD++SAV +FD + ++ + +++
Sbjct: 92 FIKLGQQAHAQIVLHGLQ-PNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSII 150
Query: 188 NGFVKRGYFEEA---LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
+ + G LE + M G+ D T+ VL +CA++ + +G +H L+
Sbjct: 151 RAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRV 210
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
+ + V +LID+Y +CG I AR++F +M R + SWN++I G+ G +G A + F
Sbjct: 211 GLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLF 270
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
M+ VS+T ++ + G E L FD M
Sbjct: 271 ERMEHRNI----VSWTAMISGYTQNGFAEQALGLFDEM---------------------- 304
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-VL 423
L+D MKPN V + S+L AC + R+ + + ++S+
Sbjct: 305 ---LQDGSE------MKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTA 355
Query: 424 LANMYA 429
LA MYA
Sbjct: 356 LAGMYA 361
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 181/483 (37%), Positives = 277/483 (57%), Gaps = 35/483 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
+ S I + S +A L F RM G +PN T +L C + ++HGL
Sbjct: 56 YNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACG--CKSAYWEAVLVHGL 113
Query: 108 VCKLGL-------------------------------DRN--NVMVGTALLDMYAKFGRM 134
KLG+ D+ +++V AL+DMYAK G +
Sbjct: 114 AIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLIDIIVRNALVDMYAKCGNL 173
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
A +FD + K+ +W +MI Y + G IE A ++FD+MP ++ +SW ++++ +++ G
Sbjct: 174 HSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREG 233
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
+ EAL+ F +M+ S V PD T++S+L AC+ +G L +G IH Y+L V + N
Sbjct: 234 QYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYN 293
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
+LID+Y++CG + A +F M + LVSWN II A++G EA++ F MQ +G P
Sbjct: 294 SLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLP 353
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
D ++ TG L+ACSH+GL++ GL YFD M IYRV IEHY C+VDL R G L +A+ +
Sbjct: 354 DEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIEL 413
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
+ MPMKP+ VV G+LL ACR G++ + ++++K L++L+P YVL++N+Y +W
Sbjct: 414 IGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRW 473
Query: 435 DGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC 494
+ KIR+ M RGI+K +SSIEI I+EFM D+ H S IY+ML+ L+ L+
Sbjct: 474 EDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSA 533
Query: 495 GYV 497
GY+
Sbjct: 534 GYL 536
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 140/294 (47%), Gaps = 16/294 (5%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD++ A RMFD++P + + +L+ G+ +A+ FR M SG+ P+ T+ VL
Sbjct: 36 GDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVL 95
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC + +H +K V V N LI +Y CG I AR++F + +TL+
Sbjct: 96 KACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLI 155
Query: 283 SW---NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
N+++ +A G + A F+ Q++ VS+T ++A + G IE + F
Sbjct: 156 DIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNV----VSWTSMISAYAQHGSIEVARQIF 211
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL---NVVENMPMKPNEVVLGSLLAACRT 396
D M VS + ++ Y R G+ +AL N + N + P+E L S+LAAC
Sbjct: 212 DQMPGKNVVS-----WNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQ 266
Query: 397 KGDIILAERLMKYLVDLDPGVDSN-YVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
GD+++ +++ Y++ Y L +MYA G A I M G+ +
Sbjct: 267 LGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNL 320
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 169/462 (36%), Positives = 277/462 (59%), Gaps = 4/462 (0%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K V + W + I+ ++ EA + G+ P+ +F + LS CA+ +
Sbjct: 514 KMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGD--V 571
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
+G +IH L K G N+ V L+ MYAK G ++ + VF +RVK + +WN++I G
Sbjct: 572 EIGRVIHSLAIKTGCQFNS-YVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISG 630
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
++ A +F++MP RD +SWTA+++ +V+ G+ E AL+ F +M G++P+ +T+
Sbjct: 631 LSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTV 690
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
S+L+AC N+G + +G H + K F + V N+LI +Y +CG E VF+ M +
Sbjct: 691 TSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPE 749
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
L++WN+++VG A NG EA++ F M+ EG PD +SF G L ACSHAGL+++G +
Sbjct: 750 HDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAH 809
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F+ M + Y + P + HY C+VDL RAG L +A ++ENMP+KP+ V+ +LL ACR
Sbjct: 810 FNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHR 869
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ L +R+ + L + + YVLL+N++A+ G WD +IR+ MK +G+ K+PG+S I
Sbjct: 870 NVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWI 929
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
++ + +H F+ GDR+H + E IYS L+ + GY+P+T
Sbjct: 930 QVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDT 971
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 157/324 (48%), Gaps = 42/324 (12%)
Query: 116 NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM 175
V TA++ YA+ GR+ A ++FD + + WNA+I GY + G ++ A +F +M
Sbjct: 456 QTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKM 515
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
PV+++ SW A++ GFV+ EALE E+ SG P + S L+ACAN+G + IG
Sbjct: 516 PVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGR 575
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
IH +K + N V N LI +Y++CG +E VF+ + + VSWNS+I G + N
Sbjct: 576 VIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENY 635
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
+ +A F M K D VS+T ++A AG E L F
Sbjct: 636 MLDDARVVFEKMPKR----DVVSWTAIISAYVQAGHGEVALDLF---------------- 675
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
+D+ +R +KPN++ + SLL+AC G I L E+ + L
Sbjct: 676 ---LDMLARG--------------IKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKL-- 716
Query: 416 GVDSNYVL---LANMYAAVGKWDG 436
G D+ + L MY G DG
Sbjct: 717 GFDTFLFVGNSLITMYFKCGYEDG 740
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 195/436 (44%), Gaps = 57/436 (13%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ + ++G++ EA L F N T+ LL+G A G +
Sbjct: 203 VSWNSMINGYSQNGKVDEARLLFDAFV----GKNIRTWTILLTGYAK-------EGRIEE 251
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ NV+ A++ Y + G + A +FD M K+ +WN+++ GY +
Sbjct: 252 AREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRM 311
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +FD+MP R+++SW +++G+V + EA + F +M + PD + VL+A
Sbjct: 312 SEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAI 371
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ L + + +K ++ +V V + +++ Y+R G ++ A F+ M +R SW
Sbjct: 372 TGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWT 431
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I FA G + +A++ + + ++ + T +TA + G I+ FD +
Sbjct: 432 TMIAAFAQCGRLDDAIQLYERVPEQTV----ATKTAMMTAYAQVGRIQKARLIFDEI--- 484
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK------------------------ 381
++P + + I+ Y++ G L++A ++ + MP+K
Sbjct: 485 --LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALEL 542
Query: 382 ----------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL--LANMYA 429
P++ S L+AC GD+ + + + +S YV+ L +MYA
Sbjct: 543 LIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNS-YVMNGLISMYA 601
Query: 430 AVGKWDGAGKIRRTMK 445
G + + RT++
Sbjct: 602 KCGNVEDGSHVFRTIR 617
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 175/396 (44%), Gaps = 50/396 (12%)
Query: 129 AKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLN 188
+ GR++ A VF+ M + +WN+MI+GY + G ++ A +FD ++ +WT LL
Sbjct: 182 GRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLT 241
Query: 189 GFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD 248
G+ K G EEA E F M E + V+ ++++ G L R + + +
Sbjct: 242 GYAKEGRIEEAREVFESM----TERNVVSWNAMISGYVQNGDLKNA----RKLFDEMPEK 293
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
NV N+++ Y C + AR++F +M +R VSW +I G+ EA + F M
Sbjct: 294 NVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMC 353
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG------CIVDLY 362
+ +PD F L+A + GL +++ + ++ + + G I++ Y
Sbjct: 354 RTVARPDQSIFVVVLSAIT-------GLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAY 406
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAA---C-RTKGDIILAERLMKYLVDLDPGVD 418
+R G L+ A++ E MP + NE +++AA C R I L ER+ + V +
Sbjct: 407 TRNGSLDLAMHFFETMPER-NEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMM 465
Query: 419 SNYVLLANMYAA-----------VGKWDG--AGKIRRTMKGRG---IQKKPGLSSIEIGS 462
+ Y + + A V W+ AG + M QK P +S +
Sbjct: 466 TAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAA 525
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
I F +++E LELL +L G VP
Sbjct: 526 MIAGF-------VQNEESREALELL-IELHRSGSVP 553
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 25/200 (12%)
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
CNT I R G +E AR+VF M +R +VSWNS+I G++ NG V EA F++ +
Sbjct: 174 CNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNI 233
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
+ ++T LT + G IE+ F+ M + VS + ++ Y + G L++A
Sbjct: 234 R----TWTILLTGYAKEGRIEEAREVFESMTERNVVS-----WNAMISGYVQNGDLKNAR 284
Query: 373 NVVENMPMKP----NEVVLGSL----LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLL 424
+ + MP K N VV G ++ R D + + ++V + S YV +
Sbjct: 285 KLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMI-----SGYVHI 339
Query: 425 ANMYAAVGKWDGAGKIRRTM 444
++ + A WD K+ RT+
Sbjct: 340 SDYWEA---WDVFVKMCRTV 356
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 157/383 (40%), Positives = 242/383 (63%), Gaps = 1/383 (0%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
+V++ ++ Y + G M A +FD M + + +WN M++GY GD+E+ ++F+EMP
Sbjct: 261 DVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMP 320
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGL 235
R+ SW L+ G+ G F E L CF+ M I G V P+ T+++VL+ACA +G L +G
Sbjct: 321 ERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGK 380
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
W+H Y FK ++ V N LID+YS+CG IE A +VF+ M + L++WNS+I G A +G
Sbjct: 381 WVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHG 440
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
+AL F+ M+ G KPDG++F G L +C+H GL+E+G YF+ M Y ++P+IEHY
Sbjct: 441 CGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHY 500
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
GC+VDL+ RAG L+ A+ V+ MPM+ + V+ +LL ACR +I LAE ++ L+ L+P
Sbjct: 501 GCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEP 560
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
+NYVLL+N+Y +G+W +++ M+ G +K PG S IE+ + EF + D H
Sbjct: 561 KNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHS 620
Query: 476 ESEHIYSMLELLSFDLKLCGYVP 498
+S+ IY +L+ L L+ GY P
Sbjct: 621 QSKEIYGVLKGLMKLLRSFGYEP 643
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 9/212 (4%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +FD P W A+ G+ ++ E + F +M+ V P+ T VL +CA
Sbjct: 118 ARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAK 177
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G G IH V+K + N V TLID+YS I A ++F M +R +V+W S+
Sbjct: 178 IGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSM 237
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+ + V A F+ + D V + ++ G ++ + FD M YR
Sbjct: 238 ISGYILCNRVALARRLFDLAPER----DVVLWNIMVSGYIEIGDMKAARKLFDTMP--YR 291
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
+ + +++ Y+ G +E + E MP
Sbjct: 292 DTMS---WNTMLNGYANNGDVEACEQLFEEMP 320
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 153/400 (38%), Gaps = 80/400 (20%)
Query: 68 FTRMTLHGTNPNHIT---FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTAL 124
F TL +P + FI+LL C + + L + + G N V +
Sbjct: 52 FIDDTLTQKHPRWVLEEHFISLLRSC-----KTVALLQKVQAQIITHGFQYNGY-VAPNV 105
Query: 125 LDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDA---- 180
+ + +M A +FD WNA+ GY V +F +M D
Sbjct: 106 VTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNC 165
Query: 181 ISWTALLNGFVKRGYFEEALECFREMQISGVEPDY---VTIISVLNACANVGT---LGIG 234
++ +L K G F E E E+ G+E + T+I V + +G+ L +G
Sbjct: 166 FTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVG 225
Query: 235 L-------WI---------HRYVLKQDFKD-----NVKVCNTLIDLYSRCGCIEFARQVF 273
+ W +R L + D +V + N ++ Y G ++ AR++F
Sbjct: 226 MLERNIVAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLF 285
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
M R +SWN+++ G+A NG V + F M + S+ G + +H G
Sbjct: 286 DTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNV----FSWNGLIGGYAHNGCFF 341
Query: 334 DGLRYF-----------------------------DIMKKIYRVSPRIEHYGCI------ 358
+ LR F D+ K ++ + I G I
Sbjct: 342 EVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNAL 401
Query: 359 VDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
+D+YS+ G +E+A+ V E+M +K + + S++ T G
Sbjct: 402 IDMYSKCGLIENAMEVFESMDLK-DLITWNSMICGLATHG 440
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 97/235 (41%), Gaps = 18/235 (7%)
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
IS+L +C V L + ++ F+ N V ++ + + AR +F
Sbjct: 70 FISLLRSCKTVALLQK---VQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 126
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+ WN+I G+ N F E + F M+ +P+ +F L +C+ G +G
Sbjct: 127 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEE 186
Query: 338 -YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+ +++K + + ++D+YS + A + M ++ N V S+++
Sbjct: 187 IHCEVIKGGLEGNQFVAT--TLIDVYSGGRAIGSAYKLFVGM-LERNIVAWTSMISGYIL 243
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANM----YAAVGKWDGAGKIRRTMKGR 447
+ LA RL DL P D V+L N+ Y +G A K+ TM R
Sbjct: 244 CNRVALARRLF----DLAPERD---VVLWNIMVSGYIEIGDMKAARKLFDTMPYR 291
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 157/384 (40%), Positives = 241/384 (62%), Gaps = 3/384 (0%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
+LD YAK G + A +F M ++ +W+ ++ Y ++GD+E A +FD+MP ++ ++W
Sbjct: 304 MLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTW 363
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
T +++ ++G EEA F EM + +E D + ++S+L ACA G+L +G IHR+V +
Sbjct: 364 TIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQ 423
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ-RMHKRTLVSWNSIIVGFAVNGFVGEALE 302
+ + VCN L+D++ +CGC+ A +F + ++ LVSWN II GFA++G +ALE
Sbjct: 424 RKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALE 483
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M+++GF PD V+ L+AC+H GL+E+G R+F M+ Y + P+IEHYGC+VDL
Sbjct: 484 LFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLL 543
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
R G +++A+++++ MP +PNEV+ GSLL+ACR ++ AE + L +L P NY
Sbjct: 544 GRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYA 603
Query: 423 LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS 482
+L+N+YA GKW K R MKG G QK G S IE+ HEF GDR H ES+ I
Sbjct: 604 VLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEFTVGDRKHPESDQISD 663
Query: 483 MLELLSFDLKLCGYVPETVAGELY 506
M++ LS +K G VP V EL+
Sbjct: 664 MIDRLSSHVKFVGCVP--VGHELF 685
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 43/249 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT +S + G + EA FT M + I +++L+ CA+ S L LG IH
Sbjct: 361 VTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAE--SGSLALGKRIH 418
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRV-KSSFTWNAMIDGYMRRGD 164
V + L R+ +V AL+DM+ K G ++ A +FD V K +WN +I G+ G
Sbjct: 419 RHVRQRKLSRST-LVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGP 477
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
E A+ + F +M+ G PD VT+I+VL+A
Sbjct: 478 GEKALEL-------------------------------FAQMKQQGFHPDAVTLINVLSA 506
Query: 225 CANVGTLGIGLWIHRYV--LKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KR 279
C ++G + G R+ ++ D+ K ++ ++DL R G I+ A + +RM +
Sbjct: 507 CTHMGLVEEG---RRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEP 563
Query: 280 TLVSWNSII 288
V W S++
Sbjct: 564 NEVIWGSLL 572
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/483 (34%), Positives = 285/483 (59%), Gaps = 16/483 (3%)
Query: 17 HQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT 76
H N ++ +T ++ Q + ++ + I + ++ + +A + RM T
Sbjct: 54 HLCNAHRRVTHAARVFAQVRDPNLHLH-----NAMIKAYAQNHQHRDAVAVYIRMLRCPT 108
Query: 77 NP-------NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA 129
+P + T+ LL C + L LG +H V + G D ++ +V +L++MY
Sbjct: 109 SPPDGHAGGDRFTYPFLLKACGG--TAALELGKQVHTHVVRSGCD-SSAIVQNSLIEMYT 165
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
+ G + LA VFD MR + +WN +I + R G + A +F+ MP + ++WTA+++G
Sbjct: 166 RAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSG 225
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
+ G + A++ FR MQ G EPD V+I++VL ACA +GTL +G WI+ Y + +
Sbjct: 226 YTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTS 285
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
+CN L+++Y++CGCI+ A Q+F M + ++SW+++I G A +G EA+ F M+K
Sbjct: 286 THICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEK 345
Query: 310 EG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
EG +P+ ++F G L+ACS+AGL+++GL +FD M +Y V P +EHYGC+VDL R+G++
Sbjct: 346 EGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQI 405
Query: 369 EDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMY 428
AL++V +MP+ + V GSLL+ACR+ GD+ A + LV+L+P N V+LAN+Y
Sbjct: 406 RRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVY 465
Query: 429 AAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
AA +W R+ ++ R ++K PG S IE+G+ + EF+AG+ E + +L++L+
Sbjct: 466 AAARRWSDVASTRKAIRSRSMRKTPGCSLIEVGNVVREFVAGEGLSSELGGLAGVLDILA 525
Query: 489 FDL 491
L
Sbjct: 526 SHL 528
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/455 (37%), Positives = 261/455 (57%), Gaps = 35/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I H + + EA F RM PN +T + +L+ CA ++ L + I
Sbjct: 152 VSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACAR--ARDLAMVKRI 209
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + + G R+ V++ T L+D+Y K G + LA
Sbjct: 210 HEYIDEHGFGRH-VVLNTVLMDVYCKCGCVQLAR-------------------------- 242
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+FD+ ++ SW ++NG V+ +EEAL FREMQ G++ D VT+ S+L A
Sbjct: 243 -----DLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLA 297
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C ++G L +G W+H Y+ KQ +V + L+D+Y++CG IE A QVF M ++ +++W
Sbjct: 298 CTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTW 357
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I+G A+ G AL+YF+ M +G KPD ++F G L ACSHAG +++G+ +F+ M
Sbjct: 358 TALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSD 417
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P IEHYG +VD+ RAGR+ +A ++++MPM P++ VLG LL ACR G++ AE
Sbjct: 418 TYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAE 477
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
R K L+++DP YVLL+N+Y + KW+ A + R M RG++K PG S IE+ +
Sbjct: 478 RAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVV 537
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
HEF+ GD SH +S I MLE + LK GYVP+
Sbjct: 538 HEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPD 572
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 177/394 (44%), Gaps = 51/394 (12%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEF-TRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NPT +SI R C + + AL F M + G P+ TF +L C + G
Sbjct: 50 NPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE-----G 104
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IH KLG + T L++MY+ G + A VFD M K+ +W MI + +
Sbjct: 105 KQIHCHSTKLGFASDTYAQNT-LMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQ 163
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
AVR+FD M M+ V+P+ VT+++V
Sbjct: 164 WDQPNEAVRLFDRM------------------------------MKSENVKPNEVTLVNV 193
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L ACA L + IH Y+ + F +V + L+D+Y +CGC++ AR +F + ++ L
Sbjct: 194 LTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNL 253
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
SWN +I G + EAL F MQ +G K D V+ L AC+H G +E G ++
Sbjct: 254 FSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELG-KWLHA 312
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSLLAACRTK 397
K R+ + +VD+Y++ G +E A+ V MP K ++LG LA C
Sbjct: 313 YIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILG--LAMCGQ- 369
Query: 398 GDIILAERLMKYLVDLD-PGVDSNYVLLANMYAA 430
AE ++Y ++ GV + + + AA
Sbjct: 370 -----AENALQYFDEMHIKGVKPDAITFVGVLAA 398
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 153/325 (47%), Gaps = 44/325 (13%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G ++ A +F ++P + + +++ G + +EAL ++EM + G+ PD T S+
Sbjct: 36 GSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLF 95
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+C N G IH + K F + NTL+++YS CGC+ AR+VF +M +T+V
Sbjct: 96 KSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVV 152
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTACSHA---GLIEDGLRY 338
SW ++I A EA+ F+ M K E KP+ V+ LTAC+ A +++ Y
Sbjct: 153 SWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEY 212
Query: 339 FD---IMKKIYRVSPRIEHY---GCIV---DLYSRA-------------GRLEDA----- 371
D + + + ++ Y GC+ DL+ +A G +ED+
Sbjct: 213 IDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEA 272
Query: 372 ---LNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL----VDLDPGVDSNYVLL 424
++ +K ++V + SLL AC G + L + L Y+ +D+D + + L
Sbjct: 273 LLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGT---AL 329
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGI 449
+MYA G + A ++ M + +
Sbjct: 330 VDMYAKCGSIETAIQVFHEMPEKDV 354
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/426 (40%), Positives = 251/426 (58%), Gaps = 5/426 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ M G PN+ TF LL CA L G ++H +LG + + V LL +
Sbjct: 101 YKYMLSTGFLPNNYTFSFLLQACAQLSD--LSFGILLHAQAVRLGWEAYD-FVQNGLLHL 157
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YA MD A +FD + TW A+I+GY + G + A ++FDEMP ++A+SW+A++
Sbjct: 158 YASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMI 217
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
G+ + G F EALE F +MQI+G P++ I+ L ACA +G L G WIH YV +
Sbjct: 218 TGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMV 277
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
+ + LID+Y++CGC+E A +VF M R + ++ S+I G A +G A+E F M
Sbjct: 278 LDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRM 337
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
Q EG P+ V+F L+ACS GL+E+GLR F M IY + P ++HYGC+VDL RAG
Sbjct: 338 QNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGM 397
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
LEDA VV MP++P+ VLG+LL ACR GD+ L + ++ L + +VLL+NM
Sbjct: 398 LEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNM 457
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
YA+ +W+ K+R+ M+ + ++K PG S IE+ + EF+AGD SH+ + I +L LL
Sbjct: 458 YASANQWEDVAKVRKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDMSHVFMDEI--VLLLL 515
Query: 488 SFDLKL 493
D L
Sbjct: 516 GIDKHL 521
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 147/351 (41%), Gaps = 70/351 (19%)
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+GDI A +F +P R + W +L F + L ++ M +G P+ T +
Sbjct: 60 QGDISHAYLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFL 119
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF------------- 268
L ACA + L G+ +H ++ ++ V N L+ LY+ C C++
Sbjct: 120 LQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDV 179
Query: 269 ------------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
ARQ+F M ++ VSW+++I G+A G EALE FN MQ
Sbjct: 180 VTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIA 239
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
GF+P+ + GALTAC+ G ++ G + + V RI ++D+Y++ G +E
Sbjct: 240 GFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTA-LIDMYAKCGCVET 298
Query: 371 ALNVVENMPMK----------------------------------PNEVVLGSLLAACRT 396
A V + M + PNEV LL+AC
Sbjct: 299 ACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSR 358
Query: 397 KGDIILAERLMKYLVD---LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
G + R+ K + + ++P V +Y L ++ G + A ++ R M
Sbjct: 359 VGLVEEGLRIFKSMTNIYGIEPVV-QHYGCLVDLLGRAGMLEDAKRVVREM 408
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 141/355 (39%), Gaps = 85/355 (23%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I+ + + G EA F M + G PNH + L+ CA FLGA+
Sbjct: 210 AVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACA-------FLGALD 262
Query: 105 HGLVCKLGLDRNNV----MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +DRN + ++GTAL+DMYAK G ++ A VFD M + F + ++I G
Sbjct: 263 QGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISG-- 320
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G+ A+E F MQ GV P+ VT I
Sbjct: 321 -----------------------------LANHGHSATAIEMFTRMQNEGVCPNEVTFIC 351
Query: 221 VLNACANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+L+AC+ VG + GL I + + + V+ L+DL R G +E A++V + M
Sbjct: 352 LLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREM--- 408
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+PD L AC G +E G
Sbjct: 409 -------------------------------PLEPDSYVLGALLNACRVHGDVELGKETV 437
Query: 340 DIMKKIYRVSPRIEHYGCIV---DLYSRAGRLEDALNVVENMPMKPNEVVLGSLL 391
+ + + ++H G V ++Y+ A + ED V + M K + V G L
Sbjct: 438 ECLAE-----RSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSL 487
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/456 (36%), Positives = 272/456 (59%), Gaps = 6/456 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V W S IS + G E ALE F +M PN +T + +LS CA L G
Sbjct: 192 VVSWNSMISAFAQ-GNCPEDALELFLKMERENVMPNSVTMVGVLSACAK--KLDLEFGRW 248
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+ + + G+ + ++ + A+LDMY K G +D A +FD M + F+W M+DGY + G
Sbjct: 249 VCSYIERKGI-KVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMG 307
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV-EPDYVTIISVL 222
D ++A +F+ MPV++ +W L++ + + G +EAL F E+Q+S + +PD VT++S L
Sbjct: 308 DYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTL 367
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+ACA +G + +G WIH Y+ ++ N + ++L+D+Y++CG +E A +VF + +R +
Sbjct: 368 SACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVY 427
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
W+++I G ++G A++ F MQ+ KP+ V+FT L ACSHAGL+++G +F M
Sbjct: 428 VWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEM 487
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+ +Y V P ++HY C+VD+ RAG LE+A+ ++ M P+ V G+LL AC ++ L
Sbjct: 488 EPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVEL 547
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
E L+ L+P VLL+N+YA G+W+ ++R+ M+ ++K+PG SSIE
Sbjct: 548 GELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANG 607
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+HEF+ GD +H S +IYS LE ++ LK GY P
Sbjct: 608 NVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEP 643
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 153/328 (46%), Gaps = 55/328 (16%)
Query: 81 ITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK--FGRMDLAT 138
+ F+ LL C D P++ F V K + VGTA+ M K FG MDL
Sbjct: 111 VIFLDLLDKCEDLPNKFTF------PFVIKAASELKASRVGTAVHGMAIKLSFG-MDL-- 161
Query: 139 VVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE 198
+ N+++ Y GD+ A R+F + +D +SW ++++ F + E+
Sbjct: 162 -----------YILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPED 210
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
ALE F +M+ V P+ VT++ VL+ACA L G W+ Y+ ++ K ++ +CN ++D
Sbjct: 211 ALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLD 270
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVS-------------------------------WNSI 287
+Y++CG ++ A+++F M +R + S WN +
Sbjct: 271 MYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVL 330
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGF-KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
I + NG EAL FN +Q KPD V+ L+AC+ G I+ G + + K
Sbjct: 331 ISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLG-GWIHVYIKRE 389
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNV 374
+ +VD+Y++ G LE AL V
Sbjct: 390 GIVLNCHLISSLVDMYAKCGSLEKALEV 417
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 12/252 (4%)
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
RM + FD FT +A+ ++ A +FD++P + +W L+ +
Sbjct: 46 ARMLRTGLFFDPFSASKLFTASAL----SSFSTLDYARNLFDQIPQPNLYTWNTLIRAYA 101
Query: 192 KRGYFEEALECFREMQISGVE--PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
++ F ++ + E P+ T V+ A + + +G +H +K F +
Sbjct: 102 SSSDPFQSFVIFLDL-LDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMD 160
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
+ + N+L+ Y CG + A ++F+ + + +VSWNS+I FA +ALE F M++
Sbjct: 161 LYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMER 220
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC--IVDLYSRAGR 367
E P+ V+ G L+AC+ +E G R+ + I R +++ C ++D+Y++ G
Sbjct: 221 ENVMPNSVTMVGVLSACAKKLDLEFG-RW--VCSYIERKGIKVDLTLCNAMLDMYTKCGS 277
Query: 368 LEDALNVVENMP 379
++DA + + MP
Sbjct: 278 VDDAQKLFDEMP 289
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 280/497 (56%), Gaps = 44/497 (8%)
Query: 15 LPHQQNP---------NQNLTTTP-QISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEA 64
L Q NP + NL P +S+ + + V +++ I + S +
Sbjct: 33 LGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARVYDAFLFSTIIRAYAESSQSKHN 92
Query: 65 ALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTA 123
A+ + + L +G +PN F +L CA L LG +HG + K G D +++ V
Sbjct: 93 AIFYYNLMLGYGISPNKYAFPFVLKACAGLRD--LNLGKAVHGSLVKFGFD-DDIFVQNT 149
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
++ MY G +E A ++FDEMP D ++W
Sbjct: 150 MVHMYCCCS------------------------------GGMEFARKLFDEMPKLDPVTW 179
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
TA++ G+ + G A+ FR+MQI+GV PD VT++SVL+AC ++G L +G WI Y+ K
Sbjct: 180 TAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEK 239
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
+ V++ N L+D++++CG ++ A +F+ M KRT+VSW S+IVG A++G EA+
Sbjct: 240 ERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSL 299
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F M+ G P+ ++F G L+ACSH+GL+E G +YF M + + + P+IEHYGC+VDL S
Sbjct: 300 FEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLS 359
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
RAG + +AL VE MP++PN ++ +L++ACR G++ L E + K L+ +P +SNYVL
Sbjct: 360 RAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVL 419
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSM 483
L+N+Y + W+ KIR M +GIQK PG + IE+ + IHEF+ GDRSH + I M
Sbjct: 420 LSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKM 479
Query: 484 LELLSFDLKLCGYVPET 500
+ + ++K GY P T
Sbjct: 480 VNEMGREMKRAGYAPTT 496
>gi|356522492|ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Glycine max]
Length = 474
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/420 (40%), Positives = 255/420 (60%), Gaps = 5/420 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
++++ LHG PN TF L S C LG M+H K G + + + TALLDM
Sbjct: 35 YSQIRLHGFLPNQHTFNFLFSACTS--LSSSSLGQMLHTHFIKSGFEPD-LFAATALLDM 91
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YAK G ++LA +FD M V+ WNAM+ G R GD++ A+ +F MP R+ + WT ++
Sbjct: 92 YAKVGALELARKLFDEMPVRGVPRWNAMMAGLARFGDMDGALELFXSMPSRNVVPWTTMI 151
Query: 188 NGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
+G+ +++AL F M Q G+ P+ VT++S+L ACAN+ L IG + Y K F
Sbjct: 152 SGYSWNKQYDKALGLFLGMEQEKGIMPNAVTLVSILPACANLXALEIGQRVEAYARKNGF 211
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK-RTLVSWNSIIVGFAVNGFVGEALEYFN 305
N N ++++Y +CG I+ A +VF + R L SWNS++VG AV+G +ALE ++
Sbjct: 212 FKNXYASNAVLEMYVKCGKIDAAWRVFNEIGSLRNLCSWNSMVVGLAVHGECCKALELYD 271
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
M EG PD V+F G L AC+ G+++ G F + + P++EHYGC+VDL RA
Sbjct: 272 QMLGEGTSPDDVTFVGLLLACTQGGMVKKGRHIFKSKTTSFYIIPKLEHYGCMVDLLGRA 331
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLA 425
G+L +A V+++M MKP+ V+ G+LL AC G++ LAE + L L+P NYV+L+
Sbjct: 332 GQLREAYEVIQSMSMKPDSVIWGALLGACSFHGNVELAEIAAESLFVLEPWNPGNYVILS 391
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
N+YA+ G+WDG K+R+ MKG I K G S IE G+ +H+F+ DRSH +S I+++L+
Sbjct: 392 NIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIEEGAQLHKFIVKDRSHPKSNEIFALLD 451
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/383 (40%), Positives = 242/383 (63%), Gaps = 1/383 (0%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
+V++ ++ Y + G M A +FD M + + +WN M++GY GD+E+ ++F+EMP
Sbjct: 219 DVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMP 278
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGL 235
R+ SW L+ G+ G F E L CF+ M I G V P+ T+++VL+ACA +G L +G
Sbjct: 279 ERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGK 338
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
W+H Y FK ++ V N LID+YS+CG IE A +VF+ M + L++WNS+I G A +G
Sbjct: 339 WVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHG 398
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
+AL F+ M+ G KPDG++F G L +C+H GL+E+G YF+ M Y ++P+IEHY
Sbjct: 399 CGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHY 458
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
GC+VDL+ RAG L+ A+ V+ MPM+ + V+ +LL ACR +I LAE ++ L+ L+P
Sbjct: 459 GCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEP 518
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
+NYVLL+N+Y +G+W +++ M+ G +K PG S IE+ + EF + D H
Sbjct: 519 KNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHS 578
Query: 476 ESEHIYSMLELLSFDLKLCGYVP 498
+S+ IY +L+ L L+ GY P
Sbjct: 579 QSKEIYGVLKGLMKLLRSFGYGP 601
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 9/212 (4%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +FD P W A+ G+ ++ E + F +M+ V P+ T VL +CA
Sbjct: 76 ARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAK 135
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G G IH V+K + N V TLID+YS I A ++F M +R +V+W S+
Sbjct: 136 IGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSM 195
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+ + V A F+ + D V + ++ G ++ + FD M YR
Sbjct: 196 ISGYILCNRVALARRLFDLAPER----DVVLWNIMVSGYIEIGDMKAARKLFDTMP--YR 249
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
+ + +++ Y+ G +E + E MP
Sbjct: 250 DTMS---WNTMLNGYANNGDVEACEQLFEEMP 278
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 156/407 (38%), Gaps = 79/407 (19%)
Query: 58 SGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNN 117
SG+IA+ L + H FI+LL C + + L + + G N
Sbjct: 5 SGKIAKLLLYSAQKHPRWVLEEH--FISLLRSC-----KTVALLQKVQAQIITHGFQYNG 57
Query: 118 VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV 177
V ++ + +M A +FD WNA+ GY V +F +M
Sbjct: 58 Y-VAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKS 116
Query: 178 RDA----ISWTALLNGFVKRGYFEEALECFREMQISGVEPDY---VTIISVLNACANVGT 230
D ++ +L K G F E E E+ G+E + T+I V + +G+
Sbjct: 117 MDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGS 176
Query: 231 ---LGIGL-------WI---------HRYVLKQDFKD-----NVKVCNTLIDLYSRCGCI 266
L +G+ W +R L + D +V + N ++ Y G +
Sbjct: 177 AYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDM 236
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
+ AR++F M R +SWN+++ G+A NG V + F M + S+ G +
Sbjct: 237 KAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNV----FSWNGLIGGY 292
Query: 327 SHAGLIEDGLRYF-----------------------------DIMKKIYRVSPRIEHYGC 357
+H G + LR F D+ K ++ + I G
Sbjct: 293 AHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGS 352
Query: 358 I------VDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
I +D+YS+ G +E+A+ V E+M +K + + S++ T G
Sbjct: 353 IYVGNALIDMYSKCGLIENAMEVFESMDLK-DLITWNSMICGLATHG 398
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 18/234 (7%)
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
IS+L +C V L + ++ F+ N V ++ + + AR +F
Sbjct: 29 ISLLRSCKTVALLQK---VQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPD 85
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR- 337
+ WN+I G+ N F E + F M+ +P+ +F L +C+ G +G
Sbjct: 86 PKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEI 145
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
+ +++K + + ++D+YS + A + M ++ N V S+++
Sbjct: 146 HCEVIKGGLEGNQFVAT--TLIDVYSGGRAIGSAYKLFVGM-LERNIVAWTSMISGYILC 202
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANM----YAAVGKWDGAGKIRRTMKGR 447
+ LA RL DL P D V+L N+ Y +G A K+ TM R
Sbjct: 203 NRVALARRLF----DLAPERD---VVLWNIMVSGYIEIGDMKAARKLFDTMPYR 249
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/426 (40%), Positives = 251/426 (58%), Gaps = 5/426 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ M G PN+ TF LL CA L G ++H +LG + + V LL +
Sbjct: 76 YKYMLSTGFLPNNYTFSFLLQACAQLSD--LSFGILLHAQAVRLGWEAYD-FVQNGLLHL 132
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YA MD A +FD + TW A+I+GY + G + A ++FDEMP ++A+SW+A++
Sbjct: 133 YASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMI 192
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
G+ + G F EALE F +MQI+G P++ I+ L ACA +G L G WIH YV +
Sbjct: 193 TGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMV 252
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
+ + LID+Y++CGC+E A +VF M R + ++ S+I G A +G A+E F M
Sbjct: 253 LDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRM 312
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
Q EG P+ V+F L+ACS GL+E+GLR F M IY + P ++HYGC+VDL RAG
Sbjct: 313 QNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGM 372
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
LEDA VV MP++P+ VLG+LL ACR GD+ L + ++ L + +VLL+NM
Sbjct: 373 LEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNM 432
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
YA+ +W+ K+R+ M+ + ++K PG S IE+ + EF+AGD SH+ + I +L LL
Sbjct: 433 YASANQWEDVAKVRKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDMSHVFMDEI--VLLLL 490
Query: 488 SFDLKL 493
D L
Sbjct: 491 GIDKHL 496
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 147/351 (41%), Gaps = 70/351 (19%)
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+GDI A +F +P R + W +L F + L ++ M +G P+ T +
Sbjct: 35 QGDISHAYLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFL 94
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF------------- 268
L ACA + L G+ +H ++ ++ V N L+ LY+ C C++
Sbjct: 95 LQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDV 154
Query: 269 ------------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
ARQ+F M ++ VSW+++I G+A G EALE FN MQ
Sbjct: 155 VTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIA 214
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
GF+P+ + GALTAC+ G ++ G + + V RI ++D+Y++ G +E
Sbjct: 215 GFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTA-LIDMYAKCGCVET 273
Query: 371 ALNVVENMPMK----------------------------------PNEVVLGSLLAACRT 396
A V + M + PNEV LL+AC
Sbjct: 274 ACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSR 333
Query: 397 KGDIILAERLMKYLVD---LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
G + R+ K + + ++P V +Y L ++ G + A ++ R M
Sbjct: 334 VGLVEEGLRIFKSMTNIYGIEPVV-QHYGCLVDLLGRAGMLEDAKRVVREM 383
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 141/355 (39%), Gaps = 85/355 (23%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I+ + + G EA F M + G PNH + L+ CA FLGA+
Sbjct: 185 AVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACA-------FLGALD 237
Query: 105 HGLVCKLGLDRNNV----MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +DRN + ++GTAL+DMYAK G ++ A VFD M + F + ++I G
Sbjct: 238 QGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISG-- 295
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G+ A+E F MQ GV P+ VT I
Sbjct: 296 -----------------------------LANHGHSATAIEMFTRMQNEGVCPNEVTFIC 326
Query: 221 VLNACANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+L+AC+ VG + GL I + + + V+ L+DL R G +E A++V + M
Sbjct: 327 LLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREM--- 383
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+PD L AC G +E G
Sbjct: 384 -------------------------------PLEPDSYVLGALLNACRVHGDVELGKETV 412
Query: 340 DIMKKIYRVSPRIEHYGCIV---DLYSRAGRLEDALNVVENMPMKPNEVVLGSLL 391
+ + + ++H G V ++Y+ A + ED V + M K + V G L
Sbjct: 413 ECLAE-----RSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSL 462
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/384 (40%), Positives = 241/384 (62%), Gaps = 3/384 (0%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
+LD YAK G + A +F M ++ +W+ ++ Y ++GD+E A +FD+MP ++ ++W
Sbjct: 232 MLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTW 291
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
T +++ ++G EEA F EM + +E D + ++S+L ACA G+L +G IHR+V +
Sbjct: 292 TIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQ 351
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ-RMHKRTLVSWNSIIVGFAVNGFVGEALE 302
+ + VCN L+D++ +CGC+ A +F + ++ LVSWN II GFA++G +ALE
Sbjct: 352 RKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALE 411
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M+++GF PD V+ L+AC+H GL+E+G R+F M+ Y + P+IEHYGC+VDL
Sbjct: 412 LFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLL 471
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
R G +++A+++++ MP +PNEV+ GSLL+ACR ++ AE + L +L P NY
Sbjct: 472 GRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYA 531
Query: 423 LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS 482
+L+N+YA GKW K R MKG G QK G S IE+ HEF GDR H ES+ I
Sbjct: 532 VLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEFTVGDRKHPESDQISD 591
Query: 483 MLELLSFDLKLCGYVPETVAGELY 506
M++ LS +K G VP V EL+
Sbjct: 592 MIDRLSSHVKFVGCVP--VGHELF 613
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 43/249 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT +S + G + EA FT M + I +++L+ CA+ S L LG IH
Sbjct: 289 VTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAE--SGSLALGKRIH 346
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRV-KSSFTWNAMIDGYMRRGD 164
V + L R+ +V AL+DM+ K G ++ A +FD V K +WN +I G+ G
Sbjct: 347 RHVRQRKLSRST-LVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGP 405
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
E +ALE F +M+ G PD VT+I+VL+A
Sbjct: 406 GE-------------------------------KALELFAQMKQQGFHPDAVTLINVLSA 434
Query: 225 CANVGTLGIGLWIHRYV--LKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KR 279
C ++G + G R+ ++ D+ K ++ ++DL R G I+ A + +RM +
Sbjct: 435 CTHMGLVEEG---RRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEP 491
Query: 280 TLVSWNSII 288
V W S++
Sbjct: 492 NEVIWGSLL 500
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 174/466 (37%), Positives = 271/466 (58%), Gaps = 37/466 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ IS + + G +EA F M + GT PN TF T+L+ C S LG IH
Sbjct: 77 VSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS--SSGFQLGRQIH 134
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
LV K + +++ VG++LLDMYAK G I
Sbjct: 135 SLVIKTSFE-SHIFVGSSLLDMYAK-------------------------------AGKI 162
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A R+FD +P RD +S TA+++G+ + G EEAL+ FR +Q G+ +YVT SVL A
Sbjct: 163 CEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTAL 222
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ + L G +H +VL+ V + N+LID+YS+CG + ++R++F M +RT++SWN
Sbjct: 223 SGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWN 282
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLR-YFDIMK 343
+++VG++ +G EA+E F M++E KPD V+F L+ CSH G+ + GL +++++
Sbjct: 283 AMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVN 342
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ P IEHYGC+VDL+ RAGR+E+A ++ MP +P + GSLL ACR ++ +
Sbjct: 343 QKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIG 402
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E + + L++++ NYV+L+N+YA+ G+WD +R MK + + K+PG S IE+
Sbjct: 403 EFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQT 462
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
+H F A DRSH E +++ + LS +K GYVPE ++ LY+ D
Sbjct: 463 LHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPE-LSCVLYDVD 507
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 128/220 (58%), Gaps = 13/220 (5%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A R+ DEMP R+ +SWTA+++G+ +RGY EAL F EM +SG P+ T +VL +C +
Sbjct: 64 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 123
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G IH V+K F+ ++ V ++L+D+Y++ G I AR+VF + +R +VS +I
Sbjct: 124 SSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAI 183
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+A G EAL+ F +Q+EG + + V++ LTA S GL D ++++
Sbjct: 184 ISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALS-------GLAALDHGRQVHS 236
Query: 348 --VSPRIEHY----GCIVDLYSRAGRLEDALNVVENMPMK 381
+ ++ Y ++D+YS+ G L + + ++MP +
Sbjct: 237 HVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPER 276
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 114/227 (50%), Gaps = 6/227 (2%)
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
M I G+E ++ SVL C + + G +H +++K ++ V + LI LY++C C
Sbjct: 1 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+ AR+V M +R +VSW ++I G++ G+ EAL F M G P+ +F LT+
Sbjct: 61 LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
C+ + + G + ++ K I ++D+Y++AG++ +A V + +P + +V
Sbjct: 121 CTSSSGFQLGRQIHSLVIKT-SFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER--DV 177
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLD-PGVDSNYVLLANMYAAV 431
V S A + L E + L G+ SNYV A++ A+
Sbjct: 178 V--SCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTAL 222
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 282/482 (58%), Gaps = 40/482 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ + + RS +I++A F M N N +++ T++ G A G +
Sbjct: 131 VTWTAMVGGYIRSNKISDAEKLFNEMP----NKNVVSWNTMIDGYAQN-------GRIDS 179
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM--RVKSSFT------------ 151
+ + NV+ ++ M A+ GR++ A +FD M R S+T
Sbjct: 180 AMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLDEALD 239
Query: 152 ------------WNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
WN MI G ++ GD+ A ++F+EMP ++ ISWT ++ G V+ G EEA
Sbjct: 240 LFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEA 299
Query: 200 LECF-REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
L+ F R + +G +P+ T +SVL AC+N+ LG G +H+ + K ++D+ V + LI+
Sbjct: 300 LKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALIN 359
Query: 259 LYSRCGCIEFARQVFQR--MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
+YS+CG + AR++F +R LVSWN II +A +G+ EA+ +F M+K GFKPD
Sbjct: 360 MYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDD 419
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
V++ G L+ACSHAGL+E+GL+YFD + K + R +HY C+VDL RAGRL++A +E
Sbjct: 420 VTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIE 479
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDG 436
+ KP+ V G+LLA C ++ + ++ K L++++P Y+LL+N+YA+ GKW
Sbjct: 480 RLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWRE 539
Query: 437 AGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGY 496
A ++R MK +G++K+PG S IE+G+ +H F+ GD+SH +S+ IYS+L L +K GY
Sbjct: 540 AARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGY 599
Query: 497 VP 498
P
Sbjct: 600 EP 601
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 202/449 (44%), Gaps = 85/449 (18%)
Query: 10 LPQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTV---QWTSSISRHCRSGRIAEAAL 66
+P +L H N + T +ISI + TV+ V W I+ + GRI EA
Sbjct: 37 IPGFYLYHSINDYR----TAKISIPRKDF--TVDGNVARCNWM--ITNLSKDGRIMEARR 88
Query: 67 EFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDR----NNVMVGT 122
F M P+ IT+ T++SG +C MI + DR NV+ T
Sbjct: 89 LFDEMR----EPDVITWTTVISGYI----KC----GMIEE--ARRLFDRVDAKKNVVTWT 134
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
A++ Y + ++ A +F+ M K+ +WN MIDGY + G I+SA+ +F++MP R+ +S
Sbjct: 135 AMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVS 194
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
W +++ + G EEA F M E D ++ +++ G L L + +
Sbjct: 195 WNTVMSMLAQCGRIEEARRLFDRMP----ERDVISWTAMI-----AGLLDEALDLFERMP 245
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
++D NT+I + G + AR++F M K+ ++SW ++I G G EAL+
Sbjct: 246 ERDLPS----WNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALK 301
Query: 303 YFNSM-QKEGFKPDGVSFTGALTACSH-AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
F+ M G KP+ +F L ACS+ AGL E + I K +Y+ S + +++
Sbjct: 302 IFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFV--VSALIN 359
Query: 361 LYSRAGRL---------------------------------EDALNVVENMP---MKPNE 384
+YS+ G L ++A+N + M KP++
Sbjct: 360 MYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDD 419
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVDL 413
V LL+AC G L E +KY +L
Sbjct: 420 VTYVGLLSACSHAG---LVEEGLKYFDEL 445
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 145/322 (45%), Gaps = 53/322 (16%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF--------- 203
N MI + G I A R+FDEM D I+WT +++G++K G EEA F
Sbjct: 71 NWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNV 130
Query: 204 -----------REMQISGVE--------PDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
R +IS E + V+ ++++ A G + + Y+ ++
Sbjct: 131 VTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAM----YLFEK 186
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
+ NV NT++ + ++CG IE AR++F RM +R ++SW ++I G + EAL+ F
Sbjct: 187 MPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIA-----GLLDEALDLF 241
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
M + D S+ +T G + + F+ M K +S GC+ +
Sbjct: 242 ERMPER----DLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCV-----Q 292
Query: 365 AGRLEDALNVVENM----PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
G E+AL + M KPN+ S+L AC + +++ + ++ DS
Sbjct: 293 EGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQ-IISKTVYQDST 351
Query: 421 YVL--LANMYAAVGKWDGAGKI 440
+V+ L NMY+ G+ A K+
Sbjct: 352 FVVSALINMYSKCGELGTARKM 373
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 243 KQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
++DF NV CN +I S+ G I AR++F M + +++W ++I G+ G + EA
Sbjct: 58 RKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEA 117
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
F+ + K + V++T + + I D + F+ M VS + ++D
Sbjct: 118 RRLFDRVDA---KKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVS-----WNTMID 169
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
Y++ GR++ A+ + E MP + N V ++++ G I A RL + + D
Sbjct: 170 GYAQNGRIDSAMYLFEKMPER-NVVSWNTVMSMLAQCGRIEEARRLFDRMPERD 222
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 255/446 (57%), Gaps = 7/446 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC--ADFPSQCLFLGAM 103
V T+ H SG+ A+A F M G P+++ +L+ C A + G M
Sbjct: 78 VARTAMARAHAVSGQAAQALDLFQDMIADGFMPDNVALAVVLAACHGAGSCTARRSPGRM 137
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H + G++ +V V T L+ +Y + G M +A VFD+M KS+ WN M+ Y+R
Sbjct: 138 VHAFIVACGIE-PDVFVSTELIRVYGERGEMTVARRVFDSMPTKSTIAWNTMVHQYVRNK 196
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM---QISGVEPDYVTIIS 220
DIE+A R+F MP RD +SW ++ G+ G +EAL FR+M V P+ T+ +
Sbjct: 197 DIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPSSCTVHPNGPTMST 256
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KR 279
VL+ACA G L G+W+H Y+ K DN + LID+Y++CG I+ A QVF++ KR
Sbjct: 257 VLSACAGAGCLETGIWVHLYIDKNQMNDNGTLDRCLIDMYAKCGSIDKALQVFEKAPGKR 316
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
L SW ++I G A++G + L F+ MQ G PD V+F G L AC+H GL+++GL +F
Sbjct: 317 DLYSWTTVICGLAMHGRANDVLRMFSMMQDSGMCPDDVTFVGVLNACAHGGLVDEGLHHF 376
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M++ YR++P+IEHYGC++DL R GRL +A +++ MPMKPN V+ G+ L+AC+
Sbjct: 377 YSMQEKYRITPKIEHYGCMIDLLGRVGRLPEAYRMIQTMPMKPNMVIWGAFLSACKVHSS 436
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E + LDP V++++MYA W G + RR M ++K PG SS+
Sbjct: 437 VELGEIAAAEVTRLDPDDPWARVMMSSMYAKAQDWSGLARERREMNSLQMKKTPGCSSVA 496
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLE 485
+ +HEF+AG H I S+LE
Sbjct: 497 LDGEVHEFVAGGNQHPLCAEICSVLE 522
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 129/320 (40%), Gaps = 78/320 (24%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH L+ K GL + TALL Y GR G+ R
Sbjct: 32 IHCLLFKAGLLHAGAHLPTALLSAYGALGR-----------------------SGHARD- 67
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+FDEMP + ++ TA+ G +AL+ F++M G PD V + VL
Sbjct: 68 -------LFDEMPNQSLVARTAMARAHAVSGQAAQALDLFQDMIADGFMPDNVALAVVLA 120
Query: 224 ACANVGTL----GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR---- 275
AC G+ G +H +++ + +V V LI +Y G + AR+VF
Sbjct: 121 ACHGAGSCTARRSPGRMVHAFIVACGIEPDVFVSTELIRVYGERGEMTVARRVFDSMPTK 180
Query: 276 ---------------------------MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
M +R +VSWN++I G+ + G EAL F M
Sbjct: 181 STIAWNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMV 240
Query: 309 KEG---FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG----CIVDL 361
P+G + + L+AC+ AG +E G I +Y ++ G C++D+
Sbjct: 241 SPSSCTVHPNGPTMSTVLSACAGAGCLETG-----IWVHLYIDKNQMNDNGTLDRCLIDM 295
Query: 362 YSRAGRLEDALNVVENMPMK 381
Y++ G ++ AL V E P K
Sbjct: 296 YAKCGSIDKALQVFEKAPGK 315
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 174/466 (37%), Positives = 271/466 (58%), Gaps = 37/466 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ IS + + G +EA F M + GT PN TF T+L+ C S LG IH
Sbjct: 544 VSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS--SSGFQLGRQIH 601
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
LV K + +++ VG++LLDMYAK G I
Sbjct: 602 SLVIKTSFE-SHIFVGSSLLDMYAK-------------------------------AGKI 629
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A R+FD +P RD +S TA+++G+ + G EEAL+ FR +Q G+ +YVT SVL A
Sbjct: 630 CEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTAL 689
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ + L G +H +VL+ V + N+LID+YS+CG + ++R++F M +RT++SWN
Sbjct: 690 SGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWN 749
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLR-YFDIMK 343
+++VG++ +G EA+E F M++E KPD V+F L+ CSH G+ + GL +++++
Sbjct: 750 AMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVN 809
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ P IEHYGC+VDL+ RAGR+E+A ++ MP +P + GSLL ACR ++ +
Sbjct: 810 QKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIG 869
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E + + L++++ NYV+L+N+YA+ G+WD +R MK + + K+PG S IE+
Sbjct: 870 EFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQT 929
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
+H F A DRSH E +++ + LS +K GYVPE ++ LY+ D
Sbjct: 930 LHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPE-LSCVLYDVD 974
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 128/220 (58%), Gaps = 13/220 (5%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A R+ DEMP R+ +SWTA+++G+ +RGY EAL F EM +SG P+ T +VL +C +
Sbjct: 531 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 590
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G IH V+K F+ ++ V ++L+D+Y++ G I AR+VF + +R +VS +I
Sbjct: 591 SSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAI 650
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+A G EAL+ F +Q+EG + + V++ LTA S GL D ++++
Sbjct: 651 ISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALS-------GLAALDHGRQVHS 703
Query: 348 --VSPRIEHY----GCIVDLYSRAGRLEDALNVVENMPMK 381
+ ++ Y ++D+YS+ G L + + ++MP +
Sbjct: 704 HVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPER 743
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 116/232 (50%), Gaps = 6/232 (2%)
Query: 201 ECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLY 260
E EM I G+E ++ SVL C + + G +H +++K ++ V + LI LY
Sbjct: 463 EALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLY 522
Query: 261 SRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT 320
++C C+ AR+V M +R +VSW ++I G++ G+ EAL F M G P+ +F
Sbjct: 523 NKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFA 582
Query: 321 GALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM 380
LT+C+ + + G + ++ K I ++D+Y++AG++ +A V + +P
Sbjct: 583 TVLTSCTSSSGFQLGRQIHSLVIKT-SFESHIFVGSSLLDMYAKAGKICEARRVFDGLPE 641
Query: 381 KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD-PGVDSNYVLLANMYAAV 431
+ +VV S A + L E + L G+ SNYV A++ A+
Sbjct: 642 R--DVV--SCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTAL 689
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/451 (37%), Positives = 266/451 (58%), Gaps = 3/451 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ + + GR EA L F M G P+ T + LLS + LG +H
Sbjct: 201 VSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGN--FDLGRFVH 258
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ G++ +++ V AL+DMYAK G + A VFD M K +W MI+ Y G I
Sbjct: 259 LHMVVTGIEIDSI-VTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLI 317
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A+ F++MP ++ +SW +++ V+ G + EA++ F M SGV + T++++L++C
Sbjct: 318 DCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSC 377
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+++G L +G H Y+ + + +CN +ID+Y++CG ++ A VF M ++ VSWN
Sbjct: 378 SHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWN 437
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
II A++G+ EA+E F MQ G PD ++FTG L+ACSH+GL++ G YF+IM
Sbjct: 438 VIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLT 497
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ +SP +EHY C+VDL R G L +A+++++ MP+KP+ VV +LL ACRT G++ + ++
Sbjct: 498 FGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQ 557
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+MK L++L YVLL+NMY+ +WD I + + GI+K +S IEI +
Sbjct: 558 IMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCY 617
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGY 496
+FM D+ H S IYSML L LK GY
Sbjct: 618 QFMVDDKRHGASTSIYSMLGQLMDHLKSAGY 648
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 172/380 (45%), Gaps = 73/380 (19%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
++ L + RM G PN T +L CA C +LG +H KLG+ ++ V
Sbjct: 117 KSLLLYRRMVCDGILPNQFTIPFVLKACA--AKSCYWLGVCVHAQSFKLGMG-SHACVQN 173
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
A+L++Y G + A VFD + ++ +WN+MI+GY + G E AV M
Sbjct: 174 AILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLM----------- 222
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
FREMQ G+EPD T++ +L+ G +G ++H +++
Sbjct: 223 --------------------FREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMV 262
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
+ + V N L+D+Y++CG ++ A+ VF +M + +VSW +I +A +G + ALE
Sbjct: 263 VTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALE 322
Query: 303 YFNSMQ---------------KEGFKPDGV----------------SFTGALTACSHAGL 331
+FN M +EG + V + L++CSH G
Sbjct: 323 FFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGD 382
Query: 332 IEDGLRYFDIMKKIYRVSPRIEHYGC--IVDLYSRAGRLEDALNVVENMPMKPN---EVV 386
+ G + I+ + + C I+D+Y++ G L+ A++V MP K V+
Sbjct: 383 LALGKQAHSY---IFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVI 439
Query: 387 LGSLLAACRTKGDIILAERL 406
+G+L K I + E++
Sbjct: 440 IGALALHGYGKEAIEMFEKM 459
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 115/229 (50%), Gaps = 1/229 (0%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
T ++ ++ D+ A ++FD++P + + L+ G+ ++L +R M
Sbjct: 69 LTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCD 128
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G+ P+ TI VL ACA +G+ +H K + V N ++++Y CG I A
Sbjct: 129 GILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSA 188
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
R+VF + +RTLVSWNS+I G++ G EA+ F MQ+ G +PD + G L+ +
Sbjct: 189 RRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKH 248
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
G + G R+ + + + ++D+Y++ G L+ A +V + M
Sbjct: 249 GNFDLG-RFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQM 296
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/459 (40%), Positives = 266/459 (57%), Gaps = 18/459 (3%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T T W I H RS ++ F RMTL G N T+ LLS C S+
Sbjct: 86 TAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVR--SRLFRE 143
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR-----MDLATVVFDAMRVKSSFTWNAM 155
G IHG V G +N+ V T L+++YA G + A +FD M + WN++
Sbjct: 144 GEQIHGRVLVNGY-WSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWNSL 202
Query: 156 IDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
+ GY+RRGD + A ++FDEMP R+ +WT ++ GF + G + AL F +M+ +GVE D
Sbjct: 203 LAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQ 262
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLK----QDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
V +++ L+ACA +G L +G WIH YV + + V + N LI +Y+ CG ++ A +
Sbjct: 263 VALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMDLAYK 322
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG---FKPDGVSFTGALTACSH 328
+F+ + +R VSW+SII GFA G EA+ F M G +PD ++F GALTACSH
Sbjct: 323 LFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSH 382
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
AGLI DG+R F M K + V P+IEHYGC+VDL SRAG L +AL+++E+MPMKPN V G
Sbjct: 383 AGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWG 442
Query: 389 SLLAACRTKGDIILAERLMKYL-VDLDPGVDSN--YVLLANMYAAVGKWDGAGKIRRTMK 445
+LL+ CR + + + K+L ++DP + ++LLAN+YAA G+W +RR M
Sbjct: 443 ALLSGCRLHKNDEIVSHVAKHLSFEIDPNNQAAGYFMLLANVYAADGRWQDTATVRRNMH 502
Query: 446 GRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
G++K G S IEI + FM G+ +H + IY ML
Sbjct: 503 DIGVKKPSGRSWIEINGVLCSFMVGEETHKDVNLIYEML 541
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 155/335 (46%), Gaps = 15/335 (4%)
Query: 85 TLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM 144
++L C F + A H + G + N ++ LL +Y FG + A VF+ +
Sbjct: 32 SVLKSCVSFRNL-----AKTHAQIVVSGFSQKNYIL-NHLLSLYISFGSLGSAQKVFEDI 85
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV----RDAISWTALLNGFVKRGYFEEAL 200
S+ WN +I G+ R + ++ +F M + + +++ LL+ V+ F E
Sbjct: 86 TAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGE 145
Query: 201 ECFREMQISGVEPDYVTIISVLNACANVGTLG-IGLWIHRYVLKQDFKDNVKVCNTLIDL 259
+ + ++G + +++N AN G G L Y+ + NV N+L+
Sbjct: 146 QIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWNSLLAG 205
Query: 260 YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
Y R G + AR+VF M +R + +W ++ GFA NG AL F+ M++ G + D V+
Sbjct: 206 YVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVAL 265
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKIYR---VSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
AL+AC+ G + G +++ +R + + ++ +Y+ G ++ A + E
Sbjct: 266 VAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMDLAYKLFE 325
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
+P + N V S++ +G + A R+ + ++
Sbjct: 326 EIPQR-NTVSWSSIITGFAKQGCGVEAIRIFQLML 359
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I SVL +C + L H ++ F + N L+ LY G + A++VF+ +
Sbjct: 30 IFSVLKSCVSFRNLAK---THAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDIT 86
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+ WN II G + +++E F M G + +G +++ L+AC + L +G +
Sbjct: 87 APSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQ 146
Query: 338 -YFDIMKKIYRVSPRIEHYGCIVDLYSRAG-----RLEDALNVVENMPMKPNEVVLGSLL 391
+ ++ Y + + +++LY+ G L+ AL + + MP N V SLL
Sbjct: 147 IHGRVLVNGYWSNLYVRTN--LINLYANGGDGGDFDLKRALYLFDEMP-DSNVVGWNSLL 203
Query: 392 AACRTKGD 399
A +GD
Sbjct: 204 AGYVRRGD 211
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 269/445 (60%), Gaps = 9/445 (2%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ + L G P+ +F L F S + G +H + GL +++ V TA + M
Sbjct: 66 YNNIQLAGLRPDSYSFPFALKAVTRFSS--IQTGRQLHSQSIRFGL-HSDLHVLTAFVQM 122
Query: 128 YAKFGRMDL--ATVVFDAMRVKSS--FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
Y+ FG + A +FD M + + WNAM++GY + GD+ +A +F+ MP R+ ISW
Sbjct: 123 YSSFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISW 182
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
TAL+ G+ + +A+ FR MQ+ VEPD + ++ L ACA +G L +G WI Y+ +
Sbjct: 183 TALITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHYIDR 242
Query: 244 QDF-KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
N+ + N LID+Y++ G I+ A QVF+ M+ +T+++W ++I G A++G EALE
Sbjct: 243 LGLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEALE 302
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F+ M++ KP+ ++F L+ACSH GL++ G YF+ M Y + P+IEHYGC++DL
Sbjct: 303 MFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDLL 362
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
RAG L++A ++ MP +PN V+ GSLLAAC T GD L E +++L++L+P NY
Sbjct: 363 GRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNSGNYA 422
Query: 423 LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS 482
LL+N+YA+ G+W+ + +R+ M G++K PG S IE+ + +HEF+AG+ SH + + I
Sbjct: 423 LLSNIYASRGRWNESRVVRKVMWDAGVKKMPGGSLIEVNNRVHEFIAGEISHSQFDRIQE 482
Query: 483 MLELLSFDLKLCGYVPETVAGELYE 507
+L ++ L L + E +G L E
Sbjct: 483 VLSKINRQLGLSQHF-EKESGALLE 506
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 18/177 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ WT+ I+ G EA F+RM PN ITFI +LS C+ +G +
Sbjct: 282 ITWTTMIAGLALHGLGTEALEMFSRMERARVKPNDITFIAILSACSH-------VGLVQT 334
Query: 106 G------LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDG 158
G ++ + G++ G ++D+ + G + A + M + ++ W +++
Sbjct: 335 GRWYFNRMISRYGIEPKIEHYG-CMIDLLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAA 393
Query: 159 YMRRGDI---ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
GD E A++ E+ ++ ++ L N + RG + E+ + M +GV+
Sbjct: 394 CNTHGDPELGELALQHLLELEPDNSGNYALLSNIYASRGRWNESRVVRKVMWDAGVK 450
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 231/357 (64%)
Query: 144 MRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF 203
M KS + AMI Y + G I+ A +FD + RDAI W +++G+ + G E L F
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
R+M + V P+ VT+++VL+AC G L G W+H Y+ NV+V +LID+YS+C
Sbjct: 61 RQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKC 120
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
G +E AR VF+R+ + +V+WNS++VG+A++GF +AL F M G++P ++F G L
Sbjct: 121 GSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVL 180
Query: 324 TACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPN 383
ACSHAGL+ +G ++F MK Y + P++EHYGC+V+L RAG LE+A +V+NM + +
Sbjct: 181 NACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQD 240
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRT 443
V+ G+LL ACR G+I L E++ +YLV + YVLL+N+YAA G W+G ++R
Sbjct: 241 PVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTL 300
Query: 444 MKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
MK G +K+PG SSIE+ + +HEF+AGD H +S IY MLE ++ LK GY P+T
Sbjct: 301 MKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQT 357
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 122/265 (46%), Gaps = 41/265 (15%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W I + + G E L F +M PN +T + +LS C + L G +H
Sbjct: 40 WNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTVLAVLSACGQ--TGALETGRWVHSY 97
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ G+ N V VGT+L+DMY+K G ++ A +VF+ + K WN+M+ GY G +
Sbjct: 98 IENNGIGIN-VRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQD 156
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A+R+ F+EM + G +P +T I VLNAC++
Sbjct: 157 ALRL-------------------------------FKEMCMIGYQPTDITFIGVLNACSH 185
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRMH-KRTLVSW 284
G + G W Y +K ++ KV + +++L R G +E A ++ + M + V W
Sbjct: 186 AGLVSEG-WKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLW 244
Query: 285 NSIIVGFAVNGFV--GEAL-EYFNS 306
+++ ++G + GE + EY S
Sbjct: 245 GTLLGACRLHGNIALGEQIAEYLVS 269
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/432 (38%), Positives = 262/432 (60%), Gaps = 14/432 (3%)
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAM-----IHGLVCKLGLDRNNVMVGTALLDMYA 129
G P+H F L+ CA LGAM +H + ++V V ++L+DMYA
Sbjct: 100 GLQPDHYVFACLVKACA-------ILGAMKQGKQVHATFIVSPVSDDDV-VKSSLVDMYA 151
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
K G D+ VVFD++ K+S +W AMI GY + G A+++F +MPV++ +SWTAL++G
Sbjct: 152 KCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISG 211
Query: 190 FVKRGYFEEALECFREMQISGVE-PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD 248
V+ G + ++ F EM+ G++ D + S++ A AN+ LG+G IH V+ ++
Sbjct: 212 LVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYES 271
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
++ V N L+D+Y++C + A+++F RM +R +VSW SIIVG A +G EAL +N M
Sbjct: 272 SLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRML 331
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
G KP+ V+F G + ACSH GL+ G +F+ M K Y ++P ++HY C++DL SR+G L
Sbjct: 332 STGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHL 391
Query: 369 EDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMY 428
E+A N+++ MP KP+E +LL+AC + ++ R+ +L+ L P S Y+LL+N+Y
Sbjct: 392 EEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIY 451
Query: 429 AAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
A+ W+ K+RR M ++K+PG S I +G F+AG+ SH E I+ +LE L
Sbjct: 452 ASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGLLEELD 511
Query: 489 FDLKLCGYVPET 500
++K GY+P+T
Sbjct: 512 AEMKKRGYIPDT 523
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 154/359 (42%), Gaps = 64/359 (17%)
Query: 29 PQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLS 88
P I +S S+ N ++ WT+ IS + +SGR +A F +M + N +++ L+S
Sbjct: 156 PDIGRVVFDSISSKN-SISWTAMISGYAQSGRKLDAIQLFQKMPV----KNLLSWTALIS 210
Query: 89 GCAD----FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM 144
G S LF+ G+D + + ++++ A + L + +
Sbjct: 211 GLVQSGNWVDSFYLFMEMR------SKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLV 264
Query: 145 RV----KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEAL 200
+ S F NA++D Y + D+ +A ++F M RD +SWT+++ G + G EEAL
Sbjct: 265 ILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEAL 324
Query: 201 ECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD-----NVKVCNT 255
+ M +G++P+ VT + ++ AC++VG + G RY KD +++
Sbjct: 325 SLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKG----RYFFNSMIKDYGINPSLQHYTC 380
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
L+DL SR G +E A + + M FKPD
Sbjct: 381 LLDLLSRSGHLEEAENLIKAM----------------------------------PFKPD 406
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
++ L+AC+H G+R D + + P Y + ++Y+ A E V
Sbjct: 407 EATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPST--YILLSNIYASAAMWESVSKV 463
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 98/192 (51%), Gaps = 5/192 (2%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGV 211
N +I+ Y + G I+ A+ +F+++P RD ISW ++L + L F M + G+
Sbjct: 42 NNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGL 101
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
+PD+ ++ ACA +G + G +H + D+ V ++L+D+Y++CG + R
Sbjct: 102 QPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRV 161
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
VF + + +SW ++I G+A +G +A++ F M + +S+T ++ +G
Sbjct: 162 VFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNL----LSWTALISGLVQSGN 217
Query: 332 IEDGLRYFDIMK 343
D F M+
Sbjct: 218 WVDSFYLFMEMR 229
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 9/198 (4%)
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
Y ++ L ACA + IG +H +++K + N LI++Y +CG I+ A +F
Sbjct: 3 YSHLVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFN 62
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIE 333
++ R +SW SI+ L F +M +++G +PD F + AC+ G ++
Sbjct: 63 QLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMK 122
Query: 334 DGLRYFDIMKKIYRVSPRIEH---YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
G + + + VSP + +VD+Y++ G L D VV + N + ++
Sbjct: 123 QGKQ----VHATFIVSPVSDDDVVKSSLVDMYAKCG-LPDIGRVVFDSISSKNSISWTAM 177
Query: 391 LAACRTKGDIILAERLMK 408
++ G + A +L +
Sbjct: 178 ISGYAQSGRKLDAIQLFQ 195
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 71/183 (38%), Gaps = 14/183 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD---FPSQCLFLGA 102
V WTS I + G EA + RM G PN +TF+ L+ C+ F +
Sbjct: 305 VSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNS 364
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDGYMR 161
MI L T LLD+ ++ G ++ A + AM K TW A++
Sbjct: 365 MIKDYGINPSLQHY-----TCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNH 419
Query: 162 RGDIESAVRMFDE---MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV--EPDYV 216
+ +R+ D + D ++ L N + +E + R M V EP Y
Sbjct: 420 HRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYS 479
Query: 217 TII 219
I+
Sbjct: 480 CIV 482
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/459 (38%), Positives = 271/459 (59%), Gaps = 6/459 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W + I + S A L + +M N TF LL C + + L +
Sbjct: 53 TFMWNAIIRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEAL--QV 110
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HGLV KLG ++V ALL +YA G + A +FD + + + +WN MIDGY++ GD
Sbjct: 111 HGLVIKLGFG-SDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGD 169
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+++A +F +MP+++ +SWT+L++G V+ G EAL EMQ +G E D V I S+L A
Sbjct: 170 VKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTA 229
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM--HKRTLV 282
CAN+G L G W+H YVL + + L+++Y +CG +E A VF ++ +++ +
Sbjct: 230 CANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVY 289
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
W ++I GFA++G EALE+FN M++EG +P+ ++FT L ACS+ GL+E+G F M
Sbjct: 290 IWTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSM 349
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
K Y V+P IEHYGC+VDL R+GRL++A +++ MPMKP+ V+ G+LL AC D +L
Sbjct: 350 KCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFLL 409
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
++ +LV++D Y+ LA + AA GKW A ++R MK G+ PG SS+ +
Sbjct: 410 GSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLNG 469
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLC-GYVPET 500
+HEF+AG + H + E I L+ ++ L+ GY P T
Sbjct: 470 IVHEFLAGHQDHPQMEQIQLKLKQIAERLRQDEGYEPAT 508
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 152/385 (39%), Gaps = 107/385 (27%)
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
G + A VF+ + ++F WNA+I Y + E
Sbjct: 36 GDLLYAQRVFNGITSPNTFMWNAIIRAYSNSDEPEL------------------------ 71
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
A +++M S V + T +L AC N+ +G L +H V+K F +V
Sbjct: 72 -------AFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFGSDVF 124
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG------------- 298
N L+ +Y+ CG I ARQ+F + +R VSWN +I G+ +G V
Sbjct: 125 ALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFLDMPLKN 184
Query: 299 ------------------EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYF 339
EAL MQ GF+ DGV+ LTAC++ G ++ G +F
Sbjct: 185 VVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGRWLHF 244
Query: 340 DIMKKIYRVSPRIEHYGC-IVDLYSRAGRLEDALNVVENMP------------------- 379
++ V I GC +V++Y + G +E+AL+V +
Sbjct: 245 YVLNNGVDVDRVI---GCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFAIH 301
Query: 380 -----------------MKPNEVVLGSLLAACRTKGDIILAERL---MKYLVDLDPGVDS 419
++PN + ++L AC G + + L MK +++P ++
Sbjct: 302 GRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSIE- 360
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTM 444
+Y + ++ G+ D A ++ + M
Sbjct: 361 HYGCMVDLLGRSGRLDEAKELIKKM 385
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 266/441 (60%), Gaps = 4/441 (0%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
W + I +S A F M + P+ +T+ ++ A GA +HG
Sbjct: 92 WNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQL--GLAHYGAQLHG 149
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
V KLGL + + T ++ MYA G + F WN+MI G + G+++
Sbjct: 150 RVIKLGLQFDPFIRNT-IIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAKCGEVD 208
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
+ ++FDEMP+R+ +SW ++++G+V+ G EAL+ F +MQ ++P T++S+LNA A
Sbjct: 209 ESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVSLLNASA 268
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+G L G WIH Y+ K +F+ NV V ++ID+Y +CG I A QVF+ + L SWN+
Sbjct: 269 RLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGLSSWNT 328
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I+G A+NG EA++ F+ ++ +PD V+F G LTAC+++GL++ YF +M K Y
Sbjct: 329 MILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYFSLMSKTY 388
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
++ P I+HY C+VD RAG LE+A ++ NMP+ P+ ++ SLL+ACR G++ LA+R
Sbjct: 389 KIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKHGNVELAKRA 448
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHE 466
K++VDLD YVLL+N+YAA +++ A + R +MK + I+K+PG S IE+ IHE
Sbjct: 449 AKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPGCSLIEVNGEIHE 508
Query: 467 FMAGDRSHIESEHIYSMLELL 487
F+AG R H +++ +YS+L L
Sbjct: 509 FVAGGRLHPQAQEVYSLLNEL 529
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 147/313 (46%), Gaps = 16/313 (5%)
Query: 104 IHGLVCKLGLDRNNVMVGTAL-LDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
IH + K GL ++ + V L + G ++ A +VF + + F+WN +I G+ +
Sbjct: 43 IHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQIHSPNLFSWNTIIRGFSQS 102
Query: 163 GDIESAVRMFDEMPVRDAI-----SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
A+ +F +M + ++ ++ ++ + + G + + G++ D
Sbjct: 103 STPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAHYGAQLHGRVIKLGLQFDPFI 162
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+++ AN G L +W Y + DF ++ N++I ++CG ++ +R++F M
Sbjct: 163 RNTIIYMYANCGFLS-EMWKAFYE-RMDF--DIVAWNSMIMGLAKCGEVDESRKLFDEMP 218
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
R VSWNS+I G+ NG + EAL+ F MQ+E KP + L A + G ++ G
Sbjct: 219 LRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVSLLNASARLGALKQGEW 278
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSLLAA 393
D ++K + I+D+Y + G + +A V E P+K N ++LG +
Sbjct: 279 IHDYIRK-NNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGLSSWNTMILGLAMNG 337
Query: 394 CRTKGDIILAERL 406
C + I L RL
Sbjct: 338 CENEA-IQLFSRL 349
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 36/255 (14%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV W S IS + R+GR+ EA F +M P+ T ++LL+ A + L G I
Sbjct: 222 TVSWNSMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVSLLNASARLGA--LKQGEWI 279
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K + NV+V +++DMY K G + A VF+ +K +WN MI G G
Sbjct: 280 HDYIRKNNFEL-NVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGLSSWNTMILGLAMNGC 338
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A+++F LEC S + PD VT + VL A
Sbjct: 339 ENEAIQLFSR-------------------------LEC------SNLRPDDVTFVGVLTA 367
Query: 225 CANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLV 282
C G + + K + ++K + ++D R G +E A ++ + M +
Sbjct: 368 CNYSGLVDKAKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAI 427
Query: 283 SWNSIIVGFAVNGFV 297
W+S++ +G V
Sbjct: 428 IWSSLLSACRKHGNV 442
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 176/486 (36%), Positives = 270/486 (55%), Gaps = 41/486 (8%)
Query: 52 ISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKL 111
I + +G +A L F M G P++ T+ +L C+ S L++G IHG V KL
Sbjct: 109 IRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACS--VSGNLWVGLQIHGAVVKL 166
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR- 170
GLD N + +G L+ MY K +D A V D M + +WN+M+ GY + G A++
Sbjct: 167 GLDMN-LYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKL 225
Query: 171 ------------------------------------MFDEMPVRDAISWTALLNGFVKRG 194
MF ++ + ISW ++ +V
Sbjct: 226 CREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNA 285
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
EA++ + +MQ+ GVEPD V+I SVL AC ++ +G IH YV ++ + N+ + N
Sbjct: 286 MPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLEN 345
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
LID+Y++CGC++ AR VF +M R +VSW S+I + ++G +A+ F M+ GF P
Sbjct: 346 ALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTP 405
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
D ++F L ACSHAGL+++G F++M + Y ++P IEHY C+VDL RAG++++A ++
Sbjct: 406 DWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YGITPGIEHYNCMVDLLGRAGKIDEAYHL 464
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
MPM+PNE V GSLL+ACR + +A +L L P YVLL+N+YA G+W
Sbjct: 465 TRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRW 524
Query: 435 DGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC 494
+R M +GI+K PG S++EI ++ F+AGD+SH +S+ IY L +L +K
Sbjct: 525 QDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKEL 584
Query: 495 GYVPET 500
GY+PET
Sbjct: 585 GYMPET 590
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 134/268 (50%), Gaps = 9/268 (3%)
Query: 170 RMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVG 229
+FDE+ ++ + + ++ +V G +++AL F+ M G PD T VL AC+ G
Sbjct: 92 HIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSG 151
Query: 230 TLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIV 289
L +GL IH V+K N+ + N L+ +Y +C ++ AR+V M R +VSWNS++
Sbjct: 152 NLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVA 211
Query: 290 GFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVS 349
G+A NG +AL+ M+ KPD + L A ++ ++ L D+ K+ S
Sbjct: 212 GYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTS-CDNVLYVKDMFVKLKEKS 270
Query: 350 PRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERL 406
+ + ++ +Y +A+++ M ++P+ V + S+L AC +L R+
Sbjct: 271 --LISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRI 328
Query: 407 MKYL--VDLDPGVDSNYVLLANMYAAVG 432
+Y+ L P + L+ +MYA G
Sbjct: 329 HEYVERKKLRPNLLLENALI-DMYAKCG 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W I+ + + EA + +M +HG P+ ++ ++L C D + LG IH
Sbjct: 272 ISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAA--VLGRRIH 329
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + L R N+++ AL+DMYAK G + A VFD M + +W +MI Y G
Sbjct: 330 EYVERKKL-RPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQG 388
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ AV + F++M+ SG PD++ +SVL AC
Sbjct: 389 KDAVAL-------------------------------FKKMRDSGFTPDWIAFVSVLAAC 417
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
++ G + G + + + ++ N ++DL R G I+ A + ++M
Sbjct: 418 SHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQM 468
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
+ ++ Q+ N + L+ Y+ CG + R +F + + +V +N +I + NG
Sbjct: 60 KILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQ 119
Query: 299 EALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGL----------- 336
+AL F +M +GF PD ++ L ACS H +++ GL
Sbjct: 120 DALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLV 179
Query: 337 ------RYFDIMKKIYRVSP--RIEHYGCIVDLYSRAGRLEDALNV---VENMPMKPNEV 385
++ D +++ P + + +V Y++ GR DAL + +E++ +KP+
Sbjct: 180 SMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAG 239
Query: 386 VLGSLLAA 393
+GSLL A
Sbjct: 240 TMGSLLPA 247
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 251/402 (62%), Gaps = 5/402 (1%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF-TWNAMIDGYMRR 162
+H L+ + G + +L+ Y G + A VFD + +WN MIDGY++
Sbjct: 93 LHSLLVRAG-HAADPHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKS 151
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD+ A +FD MP R+ +SWT ++ + + EEA+E FR MQ+ G+EPD V ++SVL
Sbjct: 152 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 211
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+AC ++G + +G W+HR+VL++ + + N +ID+Y +CG ++ A +VF+ M ++++V
Sbjct: 212 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 271
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+W ++I GFA++G EA+E F M+KE P+ ++F L+ CSH GL + G YF M
Sbjct: 272 TWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTM 331
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
Y++ PR+EHYGC++DL RAG L +A ++++MP K N + G+LLAA RT GD L
Sbjct: 332 VSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTEL 391
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
E+ + +L++L+P NY+LL+N+YA +WD ++R +M+ RG++ PG SSI++
Sbjct: 392 GEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVDG 451
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV---PETV 501
+HEF + D SH I +L ++ ++K G++ PE++
Sbjct: 452 MVHEFTSRDGSHPSLHKIREVLCAINSNIKSVGHIALLPESL 493
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 16/171 (9%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL---FLGA 102
V WT+ I+ G +EA F RM +PN ITF+ +LS C+ L +
Sbjct: 271 VTWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKT 330
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS-SFTWNAMIDGYMR 161
M+ K ++ M+ D+ + G + A + M K+ + W A++
Sbjct: 331 MVSQYKIKPRVEHYGCMI-----DLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAART 385
Query: 162 RGDI---ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
GD E A+ E+ ++ ++ L N + + +E + RE++IS
Sbjct: 386 HGDTELGEQALLHLIELEPHNSGNYILLSNIYAE----QERWDAVRELRIS 432
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 176/459 (38%), Positives = 269/459 (58%), Gaps = 21/459 (4%)
Query: 60 RIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNV 118
R +A L F +M T PN TF ++L CA L G +HGL+ K GL +
Sbjct: 96 RHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMAR--LAEGKQVHGLLLKFGLVDDEF 153
Query: 119 MVGTALLDMYAKFGRMDLATVVF----------------DAMRVKSSFTWNAMIDGYMRR 162
+V T LL MY G M+ A V+F + R + N M+DGY R
Sbjct: 154 VV-TNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARV 212
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF-REMQISGVEPDYVTIISV 221
G++++A +FD M R +SW +++G+ + G+++EA+E F R MQ+ V P+ VT++SV
Sbjct: 213 GNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSV 272
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L A + +G L +G W+H Y K + + + + L+D+Y++CG IE A QVF+R+ + +
Sbjct: 273 LPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNV 332
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
++WN++I G A++G + Y + M+K G P V++ L+ACSHAGL+++G +F+
Sbjct: 333 ITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFND 392
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M + P+IEHYGC+VDL RAG LE+A ++ NMPMKP++V+ +LL A + +I
Sbjct: 393 MVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMHKNIK 452
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
+ R + L+ + P YV L+NMYA+ G WDG +R MK I+K PG S IEI
Sbjct: 453 IGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEID 512
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IHEF+ D SH ++ I+SMLE +S L L G++P+T
Sbjct: 513 GVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDT 551
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 55/268 (20%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVK-RGYFEEALECFREM-QISGVEPDYVTIISV 221
DI A+ +FD++P R+ +W ++ + + +AL F +M + VEP+ T SV
Sbjct: 64 DIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSV 123
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKD--------------------------------- 248
L ACA + L G +H +LK D
Sbjct: 124 LKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVD 183
Query: 249 --------------NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
NV +CN ++D Y+R G ++ AR++F RM +R++VSWN +I G+A N
Sbjct: 184 DVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQN 243
Query: 295 GFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE 353
GF EA+E F+ M + G P+ V+ L A S G++E G ++ + + ++ RI+
Sbjct: 244 GFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELG-KWVHLYAEKNKI--RID 300
Query: 354 HY--GCIVDLYSRAGRLEDALNVVENMP 379
+VD+Y++ G +E A+ V E +P
Sbjct: 301 DVLGSALVDMYAKCGSIEKAIQVFERLP 328
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/374 (40%), Positives = 243/374 (64%), Gaps = 2/374 (0%)
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
+ + +++ +LD YA+ M A +F+ M +++ +W+ M+ GY + GD+E A MF
Sbjct: 211 MPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMF 270
Query: 173 DEMPV--RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
D+MP+ ++ ++WT ++ G+ ++G +EA +M SG++ D +IS+L AC G
Sbjct: 271 DKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGL 330
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
L +G+ IH + + + N V N L+D+Y++CG ++ A VF + K+ LVSWN+++ G
Sbjct: 331 LSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHG 390
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
V+G EA+E F+ M++EG +PD V+F L +C+HAGLI++G+ YF M+K+Y + P
Sbjct: 391 LGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVP 450
Query: 351 RIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
++EHYGC+VDL R GRL++A+ VV+ MPM+PN V+ G+LL ACR ++ +A+ ++ L
Sbjct: 451 QVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNL 510
Query: 411 VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAG 470
V LDP NY LL+N+YAA W+G IR MK G++K G SS+E+ GIHEF
Sbjct: 511 VKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVF 570
Query: 471 DRSHIESEHIYSML 484
D+SH +S+ IY ML
Sbjct: 571 DKSHPKSDQIYQML 584
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 215/479 (44%), Gaps = 96/479 (20%)
Query: 18 QQNPNQNLTTTPQI------SIQTNNSKSTVN----PTVQWTSSISR-HCRSGRIAEAAL 66
++N +++L P++ QTN + N P V +S+ R H ++ + +A
Sbjct: 44 RRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFF 103
Query: 67 EFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD 126
F+ M G ++ T+ LL C+ L + M+H + KLGL +++ V AL+D
Sbjct: 104 VFSEMQRFGLFADNFTYPFLLKACSG--QSWLPVVKMMHNHIEKLGLS-SDIYVPNALID 160
Query: 127 MYAKFGRMDL--ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWT 184
Y++ G + + A +F+ M + + +WN+M+ G ++ G++ A R+FDEMP RD ISW
Sbjct: 161 CYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWN 220
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
+L+G+ + +A E F +M P+ T+ W
Sbjct: 221 TMLDGYARCREMSKAFELFEKM------PERNTVS----------------W-------- 250
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM--HKRTLVSWNSIIVGFAVNGFVGEALE 302
+T++ YS+ G +E AR +F +M + +V+W II G+A G + EA
Sbjct: 251 ---------STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADR 301
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
+ M G K D + L AC+ +GL+ G+R I+K+ + ++D+Y
Sbjct: 302 LVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKR-SNLGSNAYVLNALLDMY 360
Query: 363 SRAGRLEDALNVVENMPMK----------------------------------PNEVVLG 388
++ G L+ A +V ++P K P++V
Sbjct: 361 AKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFI 420
Query: 389 SLLAACRTKGDI---ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
++L +C G I I M+ + DL P V+ +Y L ++ VG+ A K+ +TM
Sbjct: 421 AVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVE-HYGCLVDLLGRVGRLKEAIKVVQTM 478
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 45/252 (17%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
M +PVR A SW + R FEE L+ L CAN+
Sbjct: 1 MTSSLPVR-APSWVS------SRRIFEERLQ-------------------DLPKCANLNQ 34
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
+ +H +++++ +++ + LI S C A +VF ++ + + NS+I
Sbjct: 35 VK---QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRA 91
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR--- 347
A N +A F+ MQ+ G D ++ L ACS G + ++K ++
Sbjct: 92 HAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-------GQSWLPVVKMMHNHIE 144
Query: 348 ---VSPRIEHYGCIVDLYSRAGRL--EDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+S I ++D YSR G L DA+ + E M + + V S+L G++
Sbjct: 145 KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER-DTVSWNSMLGGLVKAGELRD 203
Query: 403 AERLMKYLVDLD 414
A RL + D
Sbjct: 204 ARRLFDEMPQRD 215
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 284/483 (58%), Gaps = 16/483 (3%)
Query: 17 HQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT 76
H N ++ +T ++ Q + ++ + I + ++ + +A + RM T
Sbjct: 54 HLCNAHRRVTHAARVFAQVRDPNLHLH-----NAMIKAYAQNHQHRDAVAVYIRMLRCPT 108
Query: 77 NP-------NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA 129
+P + T+ LL C + L LG +H V + G D ++ +V +L++MY
Sbjct: 109 SPPDGHAGGDRFTYPFLLKACGG--TAALELGKQVHTHVVRSGCD-SSAIVQNSLIEMYT 165
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
+ G + LA VFD MR + +WN +I + R G + A +F+ MP + ++WTA+++G
Sbjct: 166 RAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSG 225
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
+ G + A++ FR MQ G EPD V+I++VL ACA +G L +G WI+ Y + +
Sbjct: 226 YTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTS 285
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
+CN L+++Y++CGCI+ A Q+F M + ++SW+++I G A +G EA+ F M+K
Sbjct: 286 THICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEK 345
Query: 310 EG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
EG +P+ ++F G L+ACS+AGL+++GL +FD M +Y V P +EHYGC+VDL R+G++
Sbjct: 346 EGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQI 405
Query: 369 EDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMY 428
AL++V +MP+ + V GSLL+ACR+ GD+ A + LV+L+P N V+LAN+Y
Sbjct: 406 RRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVY 465
Query: 429 AAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
AA +W R+ ++ R ++K PG S IE+G+ + EF+AG+ E + +L++L+
Sbjct: 466 AAARRWSDVASTRKAIRSRSMRKTPGCSLIEVGNVVREFVAGEGLSSELGGLAGVLDILA 525
Query: 489 FDL 491
L
Sbjct: 526 SHL 528
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/459 (35%), Positives = 272/459 (59%), Gaps = 8/459 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALE-----FTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
+ W++ I+ + +SG + +L+ RM G PN +TF+++L C+ + L
Sbjct: 347 ISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGA--LEQ 404
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G IH + K+G + + + TA+ +MYAK G + A VF M K+ W +++ Y+
Sbjct: 405 GRQIHAEISKVGFESDRSL-QTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYI 463
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ GD+ SA ++F EM R+ +SW ++ G+ + G + E M++ G +PD VTIIS
Sbjct: 464 KCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIIS 523
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+L AC + L G +H +K + + V +LI +YS+CG + AR VF ++ R
Sbjct: 524 ILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRD 583
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
V+WN+++ G+ +G EA++ F M KE P+ ++FT ++AC AGL+++G F
Sbjct: 584 TVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFR 643
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
IM++ +R+ P +HYGC+VDL RAGRL++A ++ MP +P+ V +LL AC++ ++
Sbjct: 644 IMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNV 703
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
LAE +++ L+P S YV L+N+YA G+WD + K+R+ M +G++K G SSIEI
Sbjct: 704 QLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEI 763
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
IH F+A D +H E + I++ LE+L+ ++K GY P+
Sbjct: 764 DGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPD 802
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/531 (23%), Positives = 229/531 (43%), Gaps = 88/531 (16%)
Query: 23 QNLTTTPQISIQTNNSKSTVNPTVQWTSSIS-----RHCRSGRIAEAALEFTRMTLHGTN 77
QN SI NN ++ + S+S R C++GR+ EA + G
Sbjct: 16 QNYQVGAMTSIVYNNGFASTGEELAGPRSVSGGEVWRLCKAGRLKEAIQLLGIIKQRGLL 75
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
N T+ ++ CA G M+H + +LGL ++ +G +L++ Y+KFG
Sbjct: 76 VNSNTYGCIIEHCAKLRR--FEDGKMVHKQLDELGLA-IDIYLGNSLINFYSKFG----- 127
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
D+ S ++F M +RD ++W++++ + +
Sbjct: 128 --------------------------DVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPA 161
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
+A + F M+ + +EP+ +T +S+L AC N L IH V + +V V LI
Sbjct: 162 KAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALI 221
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
+YS+CG I A ++FQ+M +R +VSW +II A + + EA E + M + G P+ V
Sbjct: 222 TMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAV 281
Query: 318 SFTGALTACS-----------HAGLIEDGLR------------------YFDIMKKIYRV 348
+F L +C+ H+ + E GL D + R+
Sbjct: 282 TFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRM 341
Query: 349 SPR-IEHYGCIVDLYSRAG-----RLEDALNVVENMPMK---PNEVVLGSLLAACRTKGD 399
S R + + ++ Y+++G L++ ++E M + PN+V S+L AC G
Sbjct: 342 SKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGA 401
Query: 400 IILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
+ ++ + + G +S+ L + NMYA G A ++ M+ + + L
Sbjct: 402 LEQGRQIHAEISKV--GFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLL 459
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYE 507
++ I G + + ++ E S ++S++L + GY +++E
Sbjct: 460 TMYIKCG--DLTSAEKVFSE----MSTRNVVSWNLMIAGYAQSGDIAKVFE 504
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 142/331 (42%), Gaps = 57/331 (17%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
S+ + V W I+ + +SG IA+ + M + G P+ +T I++L C +
Sbjct: 476 SEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSA-- 533
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L G ++H KLGL+ + V V T+L+ MY+K G + A VFD + + + WNAM+
Sbjct: 534 LERGKLVHAEAVKLGLESDTV-VATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLA 592
Query: 158 GYMRRGDIESAV----RMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS---- 209
GY + G AV RM E + I++TA+++ + G +E E FR MQ
Sbjct: 593 GYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMK 652
Query: 210 -----------------------------GVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
EPD ++L AC + + + W +
Sbjct: 653 PGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHH 712
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS---WNSIIVGFAVNGFV 297
+L+ + N V TL ++Y++ G + + +V + M + L +SI + ++ FV
Sbjct: 713 ILRLE-PSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFV 771
Query: 298 GE------------ALEYFNSMQKE-GFKPD 315
E LE KE G+ PD
Sbjct: 772 AEDCAHPEIDSIHAELEMLTKEMKEAGYTPD 802
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 176/451 (39%), Positives = 255/451 (56%), Gaps = 9/451 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W + + A + M PN+ TF ++ C D + L +G
Sbjct: 77 TFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACIDVFN--LQMGLCF 134
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG V K G + + V L+ +YA G MDLA +FD + TW +I GY+ G
Sbjct: 135 HGQVVKFGWESYD-FVQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWTCLISGYLNSGQ 193
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A +FD MP ++ +SW AL+ G+V+ G+F+EALE F +MQ+SG + +I+ L A
Sbjct: 194 VLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVGALTA 253
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA +G L G WIH YV + + + LID+Y++CGCIE A VF M R + ++
Sbjct: 254 CAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDDRDVYAF 313
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+I G A + A++ FN MQ EG P+ V+F L ACS G++++GLR F+ M
Sbjct: 314 TCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFESMSN 373
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P+I+HYGC+VDL RAG++E+A VV MP++P+ LG+LL ACR GD+ L E
Sbjct: 374 RYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVHGDVQLGE 433
Query: 405 RLMKYLVD--LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
++ LV LD G +VLL+NMYA+ KW+ A KIR+ M+ + I+K PG SSIE+
Sbjct: 434 EMVDSLVQRCLDHG--GVHVLLSNMYASADKWEDASKIRKKMEDKNIRKLPGCSSIEVNG 491
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493
+ EF+ GDRS+ E I M L D +L
Sbjct: 492 TVCEFVTGDRSYALEEDI--MFLLFGIDKQL 520
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 146/351 (41%), Gaps = 70/351 (19%)
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
R + A R+F + + W ++ FV++ A ++ M S P+ T V
Sbjct: 59 RSSLFYAERLFLCLQNKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFV 118
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF------------- 268
+ AC +V L +GL H V+K ++ V N LI LY+ CG ++
Sbjct: 119 IRACIDVFNLQMGLCFHGQVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDV 178
Query: 269 ------------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
AR++F RM ++ VSW ++I G+ GF EALE F MQ
Sbjct: 179 VTWTCLISGYLNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVS 238
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
GF+ + S GALTAC+ G ++ G R+ K + +S ++D+Y++ G +E
Sbjct: 239 GFRLNRASIVGALTACAFLGALDQG-RWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEM 297
Query: 371 ALNVVENMPMK----------------------------------PNEVVLGSLLAACRT 396
A +V + M + PNEV +L AC
Sbjct: 298 ACSVFDEMDDRDVYAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSR 357
Query: 397 KGDIILAERLMKYLVD---LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
G + R+ + + + ++P + +Y L ++ GK + A ++ R M
Sbjct: 358 MGMVDEGLRIFESMSNRYVIEPQI-QHYGCLVDLLGRAGKIEEAKQVVREM 407
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 173/437 (39%), Positives = 260/437 (59%), Gaps = 7/437 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ RM G ++ T +L CAD C+ G +HG ++GL+ + VG +L+DM
Sbjct: 95 YARMHFLGLLGDNFTLPFVLKSCADLSRVCM--GRCVHGQGLRVGLE-GDFYVGASLIDM 151
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y K G + A +FD M V+ +WNA+I GYM+ G+I A +F+ M R+ +SWTA++
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 188 NGFVKRGYFEEALECFREMQISGVE--PDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
+G+ + G+ E+AL F EM G E P++VTI+SVL ACA L G IH +
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 271
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK--RTLVSWNSIIVGFAVNGFVGEALEY 303
N V L +Y++C + AR F + + + L++WN++I +A +G EA+
Sbjct: 272 LHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSI 331
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F +M + G +PD V+F G L+ CSH+GLI+ GL +F+ M I+ V PR+EHY C+VDL
Sbjct: 332 FENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLG 391
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
RAGRL +A ++ MPM+ V G+LLAACR+ ++ +AE + L L+P NYVL
Sbjct: 392 RAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVL 451
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSM 483
L+N+YA G W+ K+R +K +G++K PG S IEI H FM D+SH +++ IY
Sbjct: 452 LSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKF 511
Query: 484 LELLSFDLKLCGYVPET 500
LE L +K+ GY+P+T
Sbjct: 512 LEALPEKIKMAGYIPDT 528
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 36/231 (15%)
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL 259
LE + M G+ D T+ VL +CA++ + +G +H L+ + + V +LID+
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 260 YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
Y +CG I AR++F +M R + SWN++I G+ G +G A + F M+ VS+
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNI----VSW 207
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
T ++ + G E L FD M L+D
Sbjct: 208 TAMISGYTQNGFAEQALGLFDEM-------------------------LQDGSE------ 236
Query: 380 MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-VLLANMYA 429
MKPN V + S+L AC + R+ + + ++S+ LA MYA
Sbjct: 237 MKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYA 287
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 284/483 (58%), Gaps = 16/483 (3%)
Query: 17 HQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT 76
H N ++ +T ++ Q + ++ + I + ++ + +A + RM T
Sbjct: 54 HLCNAHRRVTHAARVFAQVRDPNLHLH-----NAMIKAYAQNHQHRDAVAVYIRMLRCPT 108
Query: 77 NP-------NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA 129
+P + T+ LL C + L LG +H V + G D ++ +V +L++MY
Sbjct: 109 SPPDGHAGGDRFTYPFLLKACGG--TAALELGKQVHTHVVRSGCD-SSAIVQNSLIEMYT 165
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
+ G + LA VFD MR + +WN +I + R G + A +F+ MP + ++WTA+++G
Sbjct: 166 RAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSG 225
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
+ G + A++ FR MQ G EPD V+I++VL ACA +G L +G WI+ Y + +
Sbjct: 226 YTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTS 285
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
+CN L+++Y++CGCI+ A Q+F M + ++SW+++I G A +G EA+ F M+K
Sbjct: 286 THICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEK 345
Query: 310 EG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
EG +P+ ++F G L+ACS+AGL+++GL +FD M +Y V P +EHYGC+VDL R+G++
Sbjct: 346 EGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQI 405
Query: 369 EDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMY 428
AL++V +MP+ + V GSLL+ACR+ GD+ A + LV+L+P N V+LAN+Y
Sbjct: 406 RRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVY 465
Query: 429 AAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
AA +W R+ ++ R ++K PG S IE+G+ + EF+AG+ E + +L++L+
Sbjct: 466 AAARRWSDVASTRKAIRSRSMRKTPGCSLIEVGNVVREFVAGEGLSSELGGLAGVLDILA 525
Query: 489 FDL 491
L
Sbjct: 526 SHL 528
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 171/448 (38%), Positives = 267/448 (59%), Gaps = 3/448 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ +TS +S H + +A F+ G P+ + LS Q +G+++H
Sbjct: 85 ISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQ--RIGSVVH 142
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
GL+ + GLD + ++V AL+DMY + G+ + A VFD M VK TW +M+ GYM+ +
Sbjct: 143 GLIFRCGLD-SELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGV 201
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+SA+ F +MP++ +SWTAL+ G V+ +ALE F +M + G P+++TI+ VL+AC
Sbjct: 202 DSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSAC 261
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++G L +G IH Y K + N+ V N L+D+Y++ G I A VF+ + + +W
Sbjct: 262 ADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWT 321
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I F V G +A+E F M + G P+ V+F L+ACSHAGLI++G FD M+++
Sbjct: 322 TMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREV 381
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + PR+EHYGC+VDL R G LE+A ++++M ++P+ V+ SLL+AC G+ LAE
Sbjct: 382 YHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAEI 441
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
++ +PG D YVLL NMYA +W A +R+ M R I KKPG S IE+ +H
Sbjct: 442 AGMEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIEVDGVVH 501
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKL 493
EF+ D++H IY LE+++ LK+
Sbjct: 502 EFLVEDKTHDARREIYVTLEIMARHLKM 529
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 136/328 (41%), Gaps = 69/328 (21%)
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y G A R+FDE+P D IS+T+L++ +K + +A+ F SG PD
Sbjct: 63 YAEFGRPADAGRLFDEIPHPDIISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAA 122
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+ L+A +G IG +H + + + VCN L+D+Y RCG E AR VF RM
Sbjct: 123 VGALSASGGLGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLV 182
Query: 279 RTLVSWNSIIVGFA--------------------------VNGFVG-----EALEYFNSM 307
+ V+W S++ G+ + G V +ALE F M
Sbjct: 183 KDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKM 242
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
EG +P+ ++ G L+AC+ G ++ G R + I ++D+Y+++G
Sbjct: 243 LLEGHRPNHITIVGVLSACADIGALDLG-RAIHGYGSKSNATTNIIVTNALMDMYAKSGS 301
Query: 368 LEDALNVVENMPMK----------------------------------PNEVVLGSLLAA 393
+ A +V E + MK PN V S+L+A
Sbjct: 302 IASAFSVFEEVQMKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSA 361
Query: 394 CRTKGDIILAERL---MKYLVDLDPGVD 418
C G I L M+ + +DP ++
Sbjct: 362 CSHAGLIQEGRELFDKMREVYHIDPRLE 389
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 123/258 (47%), Gaps = 40/258 (15%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
+ TV WT+ I+ H + + +A F +M L G PNHIT + +LS CAD + L LG
Sbjct: 213 MKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADIGA--LDLG 270
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHG K N++V AL+DMYAK G + A VF+ +++K +FTW MI +
Sbjct: 271 RAIHGYGSKSNAT-TNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMISSFTV 329
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+G NG +A+E F +M SG+ P+ VT +SV
Sbjct: 330 QG------------------------NG-------RKAVELFWDMLRSGILPNSVTFVSV 358
Query: 222 LNACANVGTLGIGLWIH---RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH- 277
L+AC++ G + G + R V D + C ++DL R G +E A + M
Sbjct: 359 LSACSHAGLIQEGRELFDKMREVYHIDPRLEHYGC--MVDLLGRGGLLEEAEALIDHMDV 416
Query: 278 KRTLVSWNSIIVGFAVNG 295
+ +V W S++ +G
Sbjct: 417 EPDIVIWRSLLSACLAHG 434
>gi|115448475|ref|NP_001048017.1| Os02g0730900 [Oryza sativa Japonica Group]
gi|46390470|dbj|BAD15931.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|46390866|dbj|BAD16370.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537548|dbj|BAF09931.1| Os02g0730900 [Oryza sativa Japonica Group]
gi|125541007|gb|EAY87402.1| hypothetical protein OsI_08809 [Oryza sativa Indica Group]
gi|125583571|gb|EAZ24502.1| hypothetical protein OsJ_08263 [Oryza sativa Japonica Group]
Length = 488
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 170/455 (37%), Positives = 268/455 (58%), Gaps = 12/455 (2%)
Query: 56 CRSGRIAEAALE-FTRMTLHG----TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCK 110
CR+ +AAL F R L G NP + L+ CA IH L+ K
Sbjct: 34 CRAAFSGDAALRAFRRHHLDGRALHANP---ALVPALAACARLLPSAAAEAEQIHALLVK 90
Query: 111 LG--LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
G + V T+L+ +YA+ GR+ A +FD M VK+ +WN ++DG +R D+++A
Sbjct: 91 SGDPPSVSGVYASTSLVRVYARLGRLGDARKMFDGMPVKTVVSWNVLLDGIVRASDLDAA 150
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNACAN 227
+F EMP R+ +SW ++ GFV+ G+ +EA++ F EM + G+ PD T++ ++A +
Sbjct: 151 WEVFVEMPERNVVSWNTVIAGFVRHGWVQEAVDLFAEMTVVYGLAPDEATMVGFVSAVRD 210
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G LGIG H YV++++F + + LI++Y+RCG + A + F + + + W S+
Sbjct: 211 MGVLGIGRCAHGYVIRREFSLDGALGVALINMYTRCGSMGDAFRCFSSVASKNVEQWTSV 270
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I GFA +G AL F M++ G +P+GV+F L ACSH GL+ +G +YF++M+ +
Sbjct: 271 IGGFAAHGHPEMALRLFTEMRQLGIEPNGVTFLAVLNACSHGGLVNEGFKYFNLMRSM-G 329
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ ++HYGC++DL RAG LE+A + ++P P V+ SLLAAC++ G++ +AE
Sbjct: 330 IKSTMQHYGCLIDLLGRAGFLEEAFELASSLPEDPGLVIWSSLLAACQSHGNVEMAEVAA 389
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
+ L +P S+YVLL+N YA G+W+ + RR M+ G+ K+PGLS IE+ +H F
Sbjct: 390 RKLAHAEPRHGSSYVLLSNTYARAGQWEDLKRTRRKMEEYGVMKQPGLSWIELDGRVHSF 449
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
++ D+ H ESE IY MLE L +L G PET+A
Sbjct: 450 VSADKLHTESEDIYQMLEDLKVNLVSAGSEPETLA 484
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 130/316 (41%), Gaps = 47/316 (14%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMT-LHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V W + I+ R G + EA F MT ++G P+ T + +S D L +G
Sbjct: 162 VVSWNTVIAGFVRHGWVQEAVDLFAEMTVVYGLAPDEATMVGFVSAVRDM--GVLGIGRC 219
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
HG V + + + G AL++MY + G M A F ++ K+ W ++I G+ G
Sbjct: 220 AHGYVIRREFSLDGAL-GVALINMYTRCGSMGDAFRCFSSVASKNVEQWTSVIGGFAAHG 278
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
E A+R+F EM R++ G+EP+ VT ++VLN
Sbjct: 279 HPEMALRLFTEM----------------------------RQL---GIEPNGVTFLAVLN 307
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT-LV 282
AC++ G + G + K ++ LIDL R G +E A ++ + + LV
Sbjct: 308 ACSHGGLVNEGFKYFNLMRSMGIKSTMQHYGCLIDLLGRAGFLEEAFELASSLPEDPGLV 367
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
W+S++ +G V E E G S+ + AG ED
Sbjct: 368 IWSSLLAACQSHGNV-EMAEVAARKLAHAEPRHGSSYVLLSNTYARAGQWED-------- 418
Query: 343 KKIYRVSPRIEHYGCI 358
+ R ++E YG +
Sbjct: 419 --LKRTRRKMEEYGVM 432
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 241/386 (62%), Gaps = 2/386 (0%)
Query: 114 DRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
D++ V T +LD Y K G+M+ A +F M ++ +W+ ++ GY ++GDIE A +FD
Sbjct: 247 DKDTVSWNT-VLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGYCKKGDIEMARVIFD 305
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI 233
+MP ++ ++WT +++ + G EEA F +M+ + VE D ++S+L ACA G+L +
Sbjct: 306 KMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVVSILAACAESGSLAL 365
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ-RMHKRTLVSWNSIIVGFA 292
G IHRYV + + VCN +ID++ +CGC+ A VF + ++ VSWN+II GFA
Sbjct: 366 GKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTIIGGFA 425
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
++G +AL++F M+ +GF+PD V+ L+AC+H G +E+G ++F M++ Y + P+I
Sbjct: 426 MHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVEEGRQHFSNMERDYGIVPQI 485
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD 412
EHYGC++DL R G +E+A+ ++++MP PNEV+ GSLL+ACR ++ AE + L
Sbjct: 486 EHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAVNELSK 545
Query: 413 LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDR 472
L P NY +L+N+YA G+W K R MKG G QK G S IE+ HEF GDR
Sbjct: 546 LQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKSAGSSWIELDEAFHEFTVGDR 605
Query: 473 SHIESEHIYSMLELLSFDLKLCGYVP 498
H +S+ I M++ LS +K G VP
Sbjct: 606 KHSDSDQISEMVDRLSSHVKDVGCVP 631
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 121/240 (50%), Gaps = 19/240 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD--FPSQCLFLGAM 103
V W++ +S +C+ G I A + F +M N +T+ ++S CA + L
Sbjct: 282 VSWSTVVSGYCKKGDIEMARVIFDKM----PTKNLVTWTIMVSACAQNGLVEEAGRLFTQ 337
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRV----KSSFTWNAMIDGY 159
+ +L +V ++L A+ G + L + +R +S+ NAMID +
Sbjct: 338 MKEAAVEL-----DVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNAMIDMF 392
Query: 160 MRRGDIESAVRMFD-EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+ G + A +FD E+ +D++SW ++ GF G+ ++AL+ F +M++ G PD VT+
Sbjct: 393 CKCGCVNRADYVFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTM 452
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFK--DNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
I+VL+AC ++G + G H +++D+ ++ +IDL R G IE A + + M
Sbjct: 453 INVLSACTHMGFVEEGRQ-HFSNMERDYGIVPQIEHYGCMIDLLGRGGLIEEAVGLIKSM 511
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 134/317 (42%), Gaps = 53/317 (16%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR--VKSSFTWNAMIDGYMR 161
+H + K GL + + + L+ YA R+ + +F + ++F N ++ Y
Sbjct: 77 LHAQLLKHGLHLDP-LAASKLISSYALQRRLPASRRIFASFPNPQATTFLPNTLLRAYAL 135
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+AV +F MP RD+ +++ L+ + + SG+ P
Sbjct: 136 NALPHAAVSLFSAMPQRDSFTYSFLI----------------KALSSSGLTP-------- 171
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L A +H +V+K ++ V N LID YS+ G A +VF+ M +R
Sbjct: 172 LRA------------VHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDT 219
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSWNS + G V A F+ M + D VS+ L + AG +ED F
Sbjct: 220 VSWNSAMAAMVRQGEVASARRMFDEMPDK----DTVSWNTVLDGYTKAGKMEDAFELFQC 275
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M + VS + +V Y + G +E A + + MP K N V +++AC G +
Sbjct: 276 MPERNVVS-----WSTVVSGYCKKGDIEMARVIFDKMPTK-NLVTWTIMVSACAQNGLVE 329
Query: 402 LAERLMKYL----VDLD 414
A RL + V+LD
Sbjct: 330 EAGRLFTQMKEAAVELD 346
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 277/493 (56%), Gaps = 38/493 (7%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAAL-EFTRMTLHGTNP-NHITFITLLSGCADFPSQCLFL 100
NP V +++ R + +L F M T P + +F LL A + S L
Sbjct: 67 NPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRS--LES 124
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM----------RVKSSF 150
G +H GLD ++ VGT L+ MY++ G + A VF+ M V + F
Sbjct: 125 GIQLHCQAIVHGLD-THLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACF 183
Query: 151 ---------------------TWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
+WN M+ GY + G++E A ++F EMPV+D +SW+ ++ G
Sbjct: 184 RCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVG 243
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
F G+F EA FRE+Q G+ P+ V++ L+ACA+ G + G +H ++ K F
Sbjct: 244 FAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWM 303
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
V V N L+D YS+CG + AR VF+RM KR++VSW S+I G A++G+ EA++ F+ M+
Sbjct: 304 VSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEME 363
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
+ G +PDG++F L ACSHAGLIE G YF MK IY + P IEHYGC+VDLY RAG+L
Sbjct: 364 ESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQL 423
Query: 369 EDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMY 428
+ A + +MP+ P ++ +LL AC G++ LAER+ + L +LDP ++VLL+N+Y
Sbjct: 424 DKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIY 483
Query: 429 AAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
A GKW +RR+M + + K PG S IE+ ++ F+AG+ + +E Y L+ +
Sbjct: 484 AVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIM 543
Query: 489 FDLKLCG-YVPET 500
L++ G Y+PE
Sbjct: 544 LKLRVEGCYIPEV 556
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 157/356 (44%), Gaps = 60/356 (16%)
Query: 90 CADFPSQCLFLGAM--IHGLVCKLGLDRNNVMVGTALLDMYAKF-GRMDLATVVFDAMRV 146
C+ + C L + +H VCK GLD + ++ G LL +D A +F
Sbjct: 8 CSSLLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPN 67
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR-----DAISW------------------ 183
F N +I G ++++ F EM R D+ S+
Sbjct: 68 PDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQ 127
Query: 184 -----------------TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
T L++ + + G+ A + F EM EP+ V +V+ AC
Sbjct: 128 LHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEM----FEPNVVAWNAVVTACF 183
Query: 227 NVGTL-GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
G + G + +R + N+ N ++ Y++ G +E AR++F M + VSW+
Sbjct: 184 RCGDVKGADMMFNRMPFR-----NLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWS 238
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK- 344
++IVGFA NGF EA +F +Q+ G +P+ VS TGAL+AC+ AG IE G ++K
Sbjct: 239 TMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKS 298
Query: 345 --IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
++ VS ++D YS+ G + A V E MP K + V S++A G
Sbjct: 299 GFLWMVSVN----NALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHG 350
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 39/260 (15%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W++ I +G EA F + G PN ++ LS CAD + + G
Sbjct: 231 VKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACAD--AGAIEFG 288
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF-TWNAMIDGYM 160
++HG + K G V V ALLD Y+K G + +A +VF+ M K S +W +MI G
Sbjct: 289 KILHGFIEKSGF-LWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLA 347
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G E A+++F EM+ SG+ PD + IS
Sbjct: 348 MHGYGEEAIQLF-------------------------------HEMEESGIRPDGIAFIS 376
Query: 221 VLNACANVGTLGIGLWIHRYVLKQ--DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+L AC++ G + G + + Y +K + + ++ ++DLY R G ++ A + M
Sbjct: 377 ILYACSHAGLIEKG-YEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPV 435
Query: 279 -RTLVSWNSIIVGFAVNGFV 297
T + W +++ +++G V
Sbjct: 436 LPTAIIWRTLLGACSIHGNV 455
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 251/402 (62%), Gaps = 5/402 (1%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF-TWNAMIDGYMRR 162
+H L+ + G + +L+ Y G + A VFD + +WN MIDGY++
Sbjct: 97 LHSLLVRAG-HAADPHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKS 155
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD+ A +FD MP R+ +SWT ++ + + EEA+E FR MQ+ G+EPD V ++SVL
Sbjct: 156 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 215
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+AC ++G + +G W+HR+VL++ + + N +ID+Y +CG ++ A +VF+ M ++++V
Sbjct: 216 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 275
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+W ++I GFA++G EA+E F M+KE P+ ++F L+ CSH GL + G YF M
Sbjct: 276 TWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTM 335
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
Y++ PR+EHYGC++DL RAG L +A ++++MP K N + G+LLAA RT GD L
Sbjct: 336 VSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTEL 395
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
E+ + +L++L+P NY+LL+N+YA +WD ++R +M+ RG++ PG SSI++
Sbjct: 396 GEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVDG 455
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV---PETV 501
+HEF + D SH I +L ++ ++K G++ PE++
Sbjct: 456 MVHEFTSRDGSHPSLHKIREVLCAINSNIKSVGHIALLPESL 497
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 263/514 (51%), Gaps = 66/514 (12%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + + ++ + + F +M PN TF +L C L G +H
Sbjct: 19 WNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVKI--NALKEGEEVHCF 76
Query: 108 VCKLGLDRNNVMVGTALLDMYAK----------FGRM-------------------DLAT 138
V K G R N V T L+DMYA FG M DL T
Sbjct: 77 VIKSGF-RANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMINGYITCCDLVT 135
Query: 139 V---------------------------------VFDAMRVKSSFTWNAMIDGYMRRGDI 165
+FD M K +WN +++GY GD+
Sbjct: 136 ARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWNTVLNGYASNGDV 195
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNA 224
+ R+F+EMP R+ SW AL+ G+ + G F E L F+ M + G V P+ T+++VL+A
Sbjct: 196 MACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSA 255
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA +G L +G W+H Y +K NV V N L+D+Y++CG +E A VF+ M + L+SW
Sbjct: 256 CARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLISW 315
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+II G AV+G +AL F+ M+ G PDG++F G L AC+H GL+EDG YF M
Sbjct: 316 NTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLVEDGFSYFKSMTD 375
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + PRIEHYGCIVDL RAG L A++ + MP++ + V+ +LL ACR ++ LAE
Sbjct: 376 DYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGACRVYKNVELAE 435
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++ L++ +P +NYV+L+N+Y G+W +++ M+ G +K PG S IE+ +
Sbjct: 436 LALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGFKKLPGCSLIEVNDYL 495
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
EF + D H E E IY L L+ L+ GYVP
Sbjct: 496 VEFYSLDERHPEKEQIYGTLRTLTKLLRSSGYVP 529
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 145/323 (44%), Gaps = 49/323 (15%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E+A ++FD++P +A W A+ G+ + ++ + FR+M+ V P+ T +L +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C + L G +H +V+K F+ N V TLID+Y+ G I A +VF M +R +++W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 285 NSIIVGF--------------------------AVNGFVG-----EALEYFNSMQKEGFK 313
++I G+ ++G++ A E F+ M +
Sbjct: 121 TAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNK--- 177
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
D +S+ L + G + R F+ M + + + ++ Y+R G + L+
Sbjct: 178 -DVMSWNTVLNGYASNGDVMACERLFEEMPE-----RNVFSWNALIGGYTRNGCFSEVLS 231
Query: 374 VVENM----PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN-YV--LLAN 426
+ M + PN+ L ++L+AC G + L + + Y G N YV L +
Sbjct: 232 AFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAE--SHGYKGNVYVRNALMD 289
Query: 427 MYAAVGKWDGAGKIRRTMKGRGI 449
MYA G + A + ++M + +
Sbjct: 290 MYAKCGVVETALDVFKSMDNKDL 312
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 169/436 (38%), Positives = 262/436 (60%), Gaps = 5/436 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPS--QCLFLGAMIHGLVCKLGLDRNNVMVGTALL 125
+ + G +P T +LL A P+ L +H KLGL ++V AL+
Sbjct: 194 YAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAVHAHAVKLGL-AGFLLVSNALI 252
Query: 126 DMYAK-FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWT 184
++A GR+ A V+ + T+N +I Y R G + A +FDEMP R+A+SW+
Sbjct: 253 RVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRVTDARALFDEMPARNAVSWS 312
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
A++NG+V+ G EAL F MQ GV PD ++ VL ACA +G L G W+H Y+
Sbjct: 313 AMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKAN 372
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
+ + V + L+D+Y++CG ++ A +VF+ M ++ +++W ++I G A++G EALE F
Sbjct: 373 NIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELF 432
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
+ M++ G KPD ++F GAL AC+H GL++ G FD M + Y + P+IEHYGC+VDL +R
Sbjct: 433 SQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLAR 492
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLL 424
G L +A +VE MPMKP+ ++ G+L+A CR ++ LAE ++K+ ++L+P YVLL
Sbjct: 493 NGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLL 552
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
N+YAA G+ A +IR M+ +G+ K PG S++EI IH+F+ GD SH E I S
Sbjct: 553 GNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKW 612
Query: 485 ELLSFDLKL-CGYVPE 499
+ + ++L GYVP+
Sbjct: 613 DEIDSRIRLEEGYVPD 628
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 111/248 (44%), Gaps = 36/248 (14%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ ++ + ++G EA F RM G P+ + +L+ CA L G +
Sbjct: 308 AVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQL--GVLEQGKWV 365
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + K R V +GTAL+DMYAK G M LA VF M+ K+ W MI G G
Sbjct: 366 HGYL-KANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHG- 423
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
RG EALE F +M+ GV+PD + I L A
Sbjct: 424 ----------------------------RG--SEALELFSQMERLGVKPDDIAFIGALCA 453
Query: 225 CANVGTLGIGLWI-HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLV 282
C + G + G + V K K ++ ++DL +R G + AR++ ++M K +
Sbjct: 454 CTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDAL 513
Query: 283 SWNSIIVG 290
W +++ G
Sbjct: 514 IWGALMAG 521
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 152/376 (40%), Positives = 239/376 (63%), Gaps = 1/376 (0%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
+LD Y K G ++ A +F M ++ +W+ M+ GY ++GD+E A +FD+MP ++ ++W
Sbjct: 231 ILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTW 290
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
T +++ ++G +EA + F +M+ + VE D ++S+L ACA G+L +G IHRYV K
Sbjct: 291 TIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRK 350
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ-RMHKRTLVSWNSIIVGFAVNGFVGEALE 302
++ + VCN LID++ +CGC+ A VF ++ VSWNSII GFA++G +ALE
Sbjct: 351 RNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALE 410
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M+++GF PD V+ L+AC+H G +++G R+F M++ Y + P+IEHYGC++DL
Sbjct: 411 LFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLL 470
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
R G +++A++++++MP +PNEV+ GSLL+ACR ++ AE + L L P NY
Sbjct: 471 GRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYA 530
Query: 423 LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS 482
+L+N+YA G+W K R MKG G QK G S +E+ HEF GDR H +S+ I
Sbjct: 531 VLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISE 590
Query: 483 MLELLSFDLKLCGYVP 498
M++ LS +K G VP
Sbjct: 591 MVDRLSSHVKHVGCVP 606
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 150/382 (39%), Gaps = 113/382 (29%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD------------- 92
V W++ +S +C+ G + A + F +M + N +T+ ++S CA
Sbjct: 257 VSWSTMVSGYCKKGDLEMARVIFDKM----PSKNLVTWTIMVSACAQKGLVDEAGKLFAQ 312
Query: 93 --------------------FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFG 132
S L LG IH V K L R + V AL+DM+ K G
Sbjct: 313 MKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGR-STHVCNALIDMFCKCG 371
Query: 133 RMDLATVVFDAMRV-KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
++ A VFD V K S +WN++I G F
Sbjct: 372 CVNRADYVFDTETVQKDSVSWNSIIGG-------------------------------FA 400
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK--DN 249
G+ ++ALE F +M+ G PD VT+I+VL+AC ++G + G H +++D+
Sbjct: 401 MHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGR-RHFSNMERDYGIMPQ 459
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
++ +IDL R G + EA++ SM
Sbjct: 460 IEHYGCMIDLLGR-------------------------------GGLIKEAVDLIKSMP- 487
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDI-MKKIYRVSP-RIEHYGCIVDLYSRAGR 367
++P+ V + L+AC + + Y +I + ++ ++ P +Y + ++Y+ AG+
Sbjct: 488 --WEPNEVIWGSLLSACR----LHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQ 541
Query: 368 LEDALNVVENMPMKPNEVVLGS 389
D M ++ GS
Sbjct: 542 WSDMAKARMQMKGTGSQKTAGS 563
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I ++ NG +A + F+ M + D VS+ A+ A G + + FD M +
Sbjct: 167 NALIDAYSKNGGFSDARKVFDEMPER----DVVSWNTAMAAMVREGELAGVRKLFDEMPE 222
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
VS + I+D Y++AG +E A + + MP + N V ++++ KGD+ +A
Sbjct: 223 KDTVS-----WNTILDGYTKAGEVEAAFELFQRMPER-NVVSWSTMVSGYCKKGDLEMA- 275
Query: 405 RLMKYLVDLDPGVD-SNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
+ + D P + + ++ + A G D AGK+ MK ++
Sbjct: 276 ---RVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVE 319
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 167/461 (36%), Positives = 270/461 (58%), Gaps = 7/461 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W I + +G EA + ++ + G TF+++L C+ + L G ++H
Sbjct: 274 VSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSV--KALAQGRLVH 331
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG-- 163
+ + GLD + V V TAL++MYAK G ++ A VF+AM+ + + W+ +I Y G
Sbjct: 332 SHILERGLD-SEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYG 390
Query: 164 -DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTIISV 221
D A ++FD + RD ISW A++ +V+ G A++ FREM +G++PD VT I+V
Sbjct: 391 KDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAV 450
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L ACA++G L +H + + + + NV V NTLI++Y+RCG +E A ++F ++T+
Sbjct: 451 LEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTV 510
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSW +++ F+ G EAL+ F M EG KPD V++T L C+H G +E G RYF
Sbjct: 511 VSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTD 570
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M +++ ++P +H+ +VDL R+GRL DA ++E+MP +P+ V + L ACR G +
Sbjct: 571 MAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLE 630
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
L E + + +LDP + Y+ ++N+YAA G W+ +R+ M+ RG++K PGLS IE+
Sbjct: 631 LGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVD 690
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
+HEF +G + H ++ I L L ++ GYVP+T A
Sbjct: 691 GKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKA 731
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 186/416 (44%), Gaps = 42/416 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I+ + ++G EA + + RM L G +H+TF+++L C+ G IH
Sbjct: 76 VSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ-----GREIH 130
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V GLD + AL+ MYA+F G +
Sbjct: 131 NRVFYSGLDSFQSL-ANALVTMYARF-------------------------------GSV 158
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A RMF + RD SW A++ + G + AL F+EM+ V+P+ T I+V++
Sbjct: 159 GDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGF 217
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ L G IH ++ F ++ V LI++Y +CG AR+VF +M KR +VSWN
Sbjct: 218 STPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWN 277
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKK 344
+I + +NG EALE + + EGFK +F L ACS + G L + I+++
Sbjct: 278 VMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILER 337
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ + +V++Y++ G LE+A V M + + V +L+ A + G A
Sbjct: 338 --GLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR-DAVAWSTLIGAYASNGYGKDAR 394
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+ K L ++ + Y G A KI R M G K ++ I +
Sbjct: 395 KARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAV 450
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 189/455 (41%), Gaps = 123/455 (27%)
Query: 32 SIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA 91
S+QT + S W + I H +SG + A F M PN T+I ++SG +
Sbjct: 167 SLQTRDETS-------WNAVILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFS 218
Query: 92 DFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT 151
+ L G IH + G D +++V TAL++MY K G A VFD M+ + +
Sbjct: 219 --TPEVLPEGRKIHAEIVANGFD-TDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVS 275
Query: 152 WNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV 211
WN MI Y+ GD F EALE ++++ + G
Sbjct: 276 WNVMIGCYVLNGD-------------------------------FHEALELYQKLDMEGF 304
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
+ T +S+L AC++V L G +H ++L++ V V L+++Y++CG +E AR+
Sbjct: 305 KRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARK 364
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGE-------------------------------- 299
VF M R V+W+++I +A NG+ +
Sbjct: 365 VFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCA 424
Query: 300 --ALEYFNSMQ-KEGFKPDGVSFTGALTACS-----------HA---------------- 329
A++ F M G KPD V+F L AC+ HA
Sbjct: 425 VAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNT 484
Query: 330 --------GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM- 380
G +E+ R F K+ VS + +V +S+ GR +AL++ + M +
Sbjct: 485 LINMYARCGSLEEAERLFAAAKEKTVVS-----WTAMVAAFSQYGRYAEALDLFQEMDLE 539
Query: 381 --KPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
KP++V S+L C G + E+ +Y D+
Sbjct: 540 GVKPDDVTYTSILFVCTHGGSL---EQGWRYFTDM 571
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 174/414 (42%), Gaps = 88/414 (21%)
Query: 77 NPNHITFITLLSGCADFPSQC--LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
P+++TF+T+L C S C + G +H + +R+ MVG AL+ MY K +
Sbjct: 4 QPDNVTFLTVLCSC----SSCGDVVEGRALHERIRCSRFERDT-MVGNALISMYGKCDSL 58
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
A VF++M W R+ +SW A++ + + G
Sbjct: 59 VDARSVFESM------DWRQ-----------------------RNVVSWNAMIAAYAQNG 89
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
+ EAL + M + G+ D+VT +SVL AC+ +L G IH V + N
Sbjct: 90 HSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRVFYSGLDSFQSLAN 146
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
L+ +Y+R G + A+++FQ + R SWN++I+ + +G AL F M+ + KP
Sbjct: 147 ALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-VKP 205
Query: 315 DGVSFTGALTACS-----------HAGLIEDGL------------------------RYF 339
+ ++ ++ S HA ++ +G F
Sbjct: 206 NSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVF 265
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRT 396
D MKK VS + ++ Y G +AL + + + M K + S+L AC +
Sbjct: 266 DKMKKRDMVS-----WNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSS 320
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGR 447
+ + ++ L+ G+DS + L NMYA G + A K+ MK R
Sbjct: 321 VKALAQGRLVHSHI--LERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR 372
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 170/448 (37%), Positives = 265/448 (59%), Gaps = 11/448 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W + I A A + M G PN+ TF +L C D +G
Sbjct: 75 TFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTDNSP----VGLAS 130
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V KLG + + ++ L+ +YA + ++ A +FD + TW A+I+GY++ G
Sbjct: 131 HAQVIKLGWESYDFVL-NGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYVKSGH 189
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A +FD+MP R+ +SW+A++ G+V G F EALE F ++Q++G+ P++ I+ L A
Sbjct: 190 VEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGALTA 249
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+ +G+L G WIH YV + + + + L+D+Y++CGCIE A VF++M + ++
Sbjct: 250 CSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDKDAFAF 309
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
S+I G A +G +A++ F MQ E P+ V+F L+ACS GL+++GLR F+ M
Sbjct: 310 TSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLRIFNCMSV 369
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y + P ++HYGC+VDL RAG LE+A +V MPM+P+ VLG+LL +CR GD+ L +
Sbjct: 370 VYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHGDVELGK 429
Query: 405 RLMKYLVD--LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
++ LV+ LD G +VLL+NMYA+ +WD K+R+ M + ++K PG SSIEI
Sbjct: 430 ETVESLVERGLDHG--GVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKVPGCSSIEIDG 487
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFD 490
+ EF+AGD S++ E + ML LL D
Sbjct: 488 SVSEFIAGDMSYLRVEDV--MLVLLGID 513
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 151/352 (42%), Gaps = 76/352 (21%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
DI A ++F +P R W ++ FV++ AL ++ M +G P+ T VL
Sbjct: 58 ADISHAYKLFLSLPHRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVL 117
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS--------------------- 261
AC + +GL H V+K ++ V N LI LY+
Sbjct: 118 RACTDNSP--VGLASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVI 175
Query: 262 ----------RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
+ G +EFAR++F +M +R VSW+++I G+ G EALE FN +Q G
Sbjct: 176 TWTALINGYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTG 235
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLE 369
+P+ GALTACS+ G ++ G R+ I + R ++ +VD+Y++ G +E
Sbjct: 236 LRPNHAGIVGALTACSYLGSLDHG-RW--IHAYVDRNGTELDRVLGTALVDMYAKCGCIE 292
Query: 370 DALNVVENMPMK----------------------------------PNEVVLGSLLAACR 395
A +V E MP K PNEV +L+AC
Sbjct: 293 IACSVFEKMPDKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACS 352
Query: 396 TKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
G + R+ M + ++PGV +Y + ++ G + A ++ R M
Sbjct: 353 RMGLVDEGLRIFNCMSVVYGIEPGVQ-HYGCMVDLLGRAGLLEEAKRLVREM 403
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 74/273 (27%)
Query: 40 STVNPTVQWTSSISRHCRSGRIAEA------------------------------ALE-F 68
ST + WT+ I+ + +SG + A ALE F
Sbjct: 169 STCRDVITWTALINGYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELF 228
Query: 69 TRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNV----MVGTAL 124
+ L G PNH + L+ C+ +LG++ HG +DRN ++GTAL
Sbjct: 229 NDLQLTGLRPNHAGIVGALTACS-------YLGSLDHGRWIHAYVDRNGTELDRVLGTAL 281
Query: 125 LDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWT 184
+DMYAK G +++A VF+ M K +F + ++I G G +SA
Sbjct: 282 VDMYAKCGCIEIACSVFEKMPDKDAFAFTSLISGLANHG--QSA---------------- 323
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV-LK 243
+A++ F MQ V P+ VT I VL+AC+ +G + GL I + +
Sbjct: 324 -------------DAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLRIFNCMSVV 370
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+ V+ ++DL R G +E A+++ + M
Sbjct: 371 YGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREM 403
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 177/479 (36%), Positives = 265/479 (55%), Gaps = 28/479 (5%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD----FPSQCLF-- 99
+ W + + + R+ +A F RM + +++ T++SG A +Q LF
Sbjct: 205 ISWNCMMGGYVKRNRLVDARGIFDRMP----ERDEVSWNTMISGYAQNGELLEAQRLFEE 260
Query: 100 --------LGAMIHGLVCKLGLDR----------NNVMVGTALLDMYAKFGRMDLATVVF 141
AM+ G V LD N + A++ Y + RMD A +F
Sbjct: 261 SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELF 320
Query: 142 DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALE 201
+AM ++ +WN MI GY + GDI A FD MP RD+ISW A++ G+ + GY EEAL
Sbjct: 321 EAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALH 380
Query: 202 CFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
F EM+ G + T S L+ CA + L +G +H V+K + V N L+ +Y
Sbjct: 381 LFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYC 440
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
+CG I+ A VF+ + ++ +VSWN++I G+A +GF EAL F SM+K G PD V+ G
Sbjct: 441 KCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVG 500
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+ACSH GL++ G YF M + Y ++ +HY C++DL RAGRL+DA N+++NMP +
Sbjct: 501 VLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFE 560
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
P+ G+LL A R G+ L E+ K + +++P YVLL+N+YAA G+W G++R
Sbjct: 561 PDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMR 620
Query: 442 RTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
M+ RG++K PG S +E+ + IH F GD H E + IY+ LE L +K GYV T
Sbjct: 621 LRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSST 679
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 196/449 (43%), Gaps = 51/449 (11%)
Query: 18 QQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTN 77
Q N + + +T +S +T V+W +I+ H R+G+ A F M +
Sbjct: 22 QTTTTANRKPSTRNQPKTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSS- 80
Query: 78 PNHITFITLLSGC-------------ADFPSQCLF-LGAMIHGLV-------CKLGLDR- 115
I++ ++SGC P++ L MI G V +L D+
Sbjct: 81 ---ISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQM 137
Query: 116 --NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
+V+ A+L YA+ G + A +FD M K+S +WN M+ Y++ G IE A R+F+
Sbjct: 138 PERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFE 197
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI 233
+ ISW ++ G+VKR +A F M E D V+ ++++ A G L
Sbjct: 198 SKADWELISWNCMMGGYVKRNRLVDARGIFDRMP----ERDEVSWNTMISGYAQNGEL-- 251
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV 293
L R + +D V ++ Y + G ++ AR+VF M ++ VSWN+II G+
Sbjct: 252 -LEAQRLFEESPVRD-VFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQ 309
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE 353
+ +A E F +M + S+ +T + G I +FD M + +S
Sbjct: 310 CKRMDQARELFEAMPCQNVS----SWNTMITGYAQNGDIAQARNFFDRMPQRDSIS---- 361
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTKGDIILAERLMKYL 410
+ I+ Y+++G E+AL++ M + N S L+ C + L +++ +
Sbjct: 362 -WAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRV 420
Query: 411 VD--LDPGVDSNYVLLANMYAAVGKWDGA 437
V L+ G LL MY G D A
Sbjct: 421 VKAGLESGCYVGNALLV-MYCKCGNIDDA 448
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 165/458 (36%), Positives = 269/458 (58%), Gaps = 34/458 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W S + + +SG E F M + +T +++L+ C L LG I+
Sbjct: 193 WNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLAD--LELGEWINRY 250
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V + GL N ++ T+L+DMYAK G+ +++
Sbjct: 251 VEEKGLKGNPTLI-TSLVDMYAKCGQ-------------------------------VDT 278
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A R+FD+M RD ++W+A+++G+ + EAL+ F EMQ + ++P+ +T++S+L++CA
Sbjct: 279 ARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAV 338
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G L G W+H ++ K+ K V + L+D Y++CG +E + +VF +M + ++SW +
Sbjct: 339 LGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVL 398
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G A NG +ALEYF M ++ +P+ V+F G L+ACSHAGL+++G F M + +
Sbjct: 399 IQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFG 458
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ PRIEHYGC+VD+ RAG +E+A ++NMP++PN V+ +LLA+C+ ++ + E +
Sbjct: 459 IEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESL 518
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
K L+ L+P +Y+LL+N+YA+VG+W+ A K+R MK +GI+K PG S IE+ IHEF
Sbjct: 519 KQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEF 578
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGEL 505
A D H +SE IY+ +E + +K GYVP T L
Sbjct: 579 FAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARL 616
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 161/319 (50%), Gaps = 35/319 (10%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
EA L F M + P+ TF +L C+ Q L G IH L+ K G
Sbjct: 107 EAILLFKEMHENSVQPDEFTFPCILKVCSRL--QALSEGEQIHALIMKCG---------- 154
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
FG F N +I Y G++E A R+FDEM R+ +
Sbjct: 155 --------FG--------------SHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRT 192
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
W ++ G+ K G +EE ++ F EM + D VT++SVL AC + L +G WI+RYV
Sbjct: 193 WNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVE 252
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
++ K N + +L+D+Y++CG ++ AR++F +M +R +V+W+++I G++ EAL+
Sbjct: 253 EKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALD 312
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F+ MQK P+ ++ L++C+ G +E G ++ K R+ + ++D Y
Sbjct: 313 LFHEMQKANIDPNEITMVSILSSCAVLGALETG-KWVHFFIKKKRMKLTVTLGTALMDFY 371
Query: 363 SRAGRLEDALNVVENMPMK 381
++ G +E ++ V MP+K
Sbjct: 372 AKCGSVESSIEVFGKMPVK 390
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 127/272 (46%), Gaps = 43/272 (15%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ AV +F ++ D+ ++ ++ GF + EA+ F+EM + V+PD T +L
Sbjct: 74 MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+ + L G IH ++K F + V NTLI +Y+ CG +E AR+VF M +R + +W
Sbjct: 134 CSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTW 193
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC------------------ 326
NS+ G+ +G E ++ F+ M + + D V+ LTAC
Sbjct: 194 NSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEE 253
Query: 327 -----------------SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
+ G ++ R FD M + V+ + ++ YS+A R
Sbjct: 254 KGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVA-----WSAMISGYSQASRCR 308
Query: 370 DALNVVENMP---MKPNEVVLGSLLAACRTKG 398
+AL++ M + PNE+ + S+L++C G
Sbjct: 309 EALDLFHEMQKANIDPNEITMVSILSSCAVLG 340
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 144/341 (42%), Gaps = 79/341 (23%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ IS + ++ R EA F M +PN IT +++LS CA + L G +H
Sbjct: 292 VAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGA--LETGKWVH 349
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K + + V +GTAL+D YAK G ++ + VF M VK+ +W
Sbjct: 350 FFIKKKRM-KLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSW------------- 395
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
T L+ G G ++ALE F M VEP+ VT I VL+AC
Sbjct: 396 ------------------TVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSAC 437
Query: 226 ANVGTL--GIGLWIHRYVLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
++ G + G L++ + +DF + ++ ++D+ R G IE
Sbjct: 438 SHAGLVDEGRDLFVS---MSRDFGIEPRIEHYGCMVDILGRAGLIE-------------- 480
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
EA ++ +M +P+ V + L +C +E G +
Sbjct: 481 -----------------EAFQFIKNMP---IQPNAVIWRTLLASCKVHKNVEIGE---ES 517
Query: 342 MKKIYRVSPRIE-HYGCIVDLYSRAGRLEDALNVVENMPMK 381
+K++ + P Y + ++Y+ GR EDAL V M K
Sbjct: 518 LKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEK 558
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 250/419 (59%), Gaps = 11/419 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S + + + R E F M + G + +T + ++ C + AM+
Sbjct: 144 VSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSL-GEWGVADAMVD 202
Query: 106 GLVCKLGLDRNNVMV----GTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ + NNV + G L+DMY + G + LA VFD M+ ++ +WNAMI GY +
Sbjct: 203 YI------EENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGK 256
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++ +A +FD M RD ISWT ++ + + G F EAL F+EM S V+PD +T+ SV
Sbjct: 257 AGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASV 316
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+ACA+ G+L +G H Y+ K D K ++ V N LID+Y +CG +E A +VF+ M K+
Sbjct: 317 LSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDS 376
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSW SII G AVNGF AL+YF+ M +E +P +F G L AC+HAGL++ GL YF+
Sbjct: 377 VSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFES 436
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M+K+Y + P ++HYGC+VDL SR+G L+ A ++ MP+ P+ V+ LL+A + G+I
Sbjct: 437 MEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHGNIP 496
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
LAE K L++LDP NYVL +N YA +W+ A K+R M+ +QK G S IE+
Sbjct: 497 LAEIATKKLLELDPSNSGNYVLSSNTYAGSNRWEDAVKMRELMEKSNVQKPSGSSCIEM 555
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 188/409 (45%), Gaps = 69/409 (16%)
Query: 23 QNLTTTPQISIQTNNSKSTVN-PTVQ-WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNH 80
++ +P ++ +N ++ PT+ W I S + EA + M G N+
Sbjct: 18 KSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNN 77
Query: 81 ITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVV 140
+T++ L CA P + G+ IH V KLG + +++ V AL++MY G + LA
Sbjct: 78 LTYLFLFKACARVPD--VSCGSTIHARVLKLGFE-SHLYVSNALINMYGSCGHLGLAQ-- 132
Query: 141 FDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEAL 200
++FDEMP RD +SW +L+ G+ + F E L
Sbjct: 133 -----------------------------KVFDEMPERDLVSWNSLVCGYGQCKRFREVL 163
Query: 201 ECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLY 260
F M+++GV+ D VT++ V+ AC ++G G+ + Y+ + + + +V + NTLID+Y
Sbjct: 164 GVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMY 223
Query: 261 SRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV----------------------- 297
R G + AR VF +M R LVSWN++I+G+ G +
Sbjct: 224 GRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMIT 283
Query: 298 --------GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVS 349
EAL F M + KPD ++ L+AC+H G ++ G D ++K Y V
Sbjct: 284 SYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQK-YDVK 342
Query: 350 PRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
I ++D+Y + G +E AL V + M K + V S+++ G
Sbjct: 343 ADIYVGNALIDMYCKCGVVEKALEVFKEM-RKKDSVSWTSIISGLAVNG 390
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 151/339 (44%), Gaps = 22/339 (6%)
Query: 144 MRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF 203
+R S +N + + I A +F ++ W ++ G+ EA+ +
Sbjct: 6 LRTDPSTIYNLIKSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMY 65
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
M G+ + +T + + ACA V + G IH VLK F+ ++ V N LI++Y C
Sbjct: 66 NLMYRQGLLGNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSC 125
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
G + A++VF M +R LVSWNS++ G+ E L F +M+ G K D V+ +
Sbjct: 126 GHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVV 185
Query: 324 TACSHAGLIEDGLRYFDIM-KKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPM 380
AC+ G E G+ D M I + I+ Y ++D+Y R G + A V + M
Sbjct: 186 LACTSLG--EWGVA--DAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQW 241
Query: 381 KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKI 440
+ N V +++ G+++ A L + D +N + Y+ G++ A ++
Sbjct: 242 R-NLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMI---TSYSQAGQFTEALRL 297
Query: 441 RRTM-----KGRGIQKKPGLS------SIEIGSGIHEFM 468
+ M K I LS S+++G H+++
Sbjct: 298 FKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYI 336
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 233/351 (66%), Gaps = 1/351 (0%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
+ N+++ Y GD+ SA ++FD+MP +D ++W +++NGF + G EEAL + EM
Sbjct: 157 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 216
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G++PD TI+S+L+ACA +G L +G +H Y++K N+ N L+DLY+RCG +E A
Sbjct: 217 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTACSH 328
+ +F M + VSW S+IVG AVNGF EA+E F M+ EG P ++F G L ACSH
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
G++++G YF M++ Y++ PRIEH+GC+VDL +RAG+++ A +++MPM+PN V+
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 396
Query: 389 SLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
+LL AC GD LAE ++ L+P +YVLL+NMYA+ +W KIR+ M G
Sbjct: 397 TLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDG 456
Query: 449 IQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
++K PG S +E+G+ +HEF+ GD+SH +S+ IY+ L+ ++ L+ GYVP+
Sbjct: 457 VKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ 507
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 126/238 (52%), Gaps = 4/238 (1%)
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLG 232
E P+ + W L+ G+ + G A +REM++SG VEPD T ++ A + +
Sbjct: 80 EKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
+G IH V++ F + V N+L+ LY+ CG + A +VF +M ++ LV+WNS+I GFA
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
NG EAL + M +G KPDG + L+AC+ G + G R M K+ ++ +
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GLTRNL 257
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
++DLY+R GR+E+A + + M K N V SL+ G A L KY+
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 39/254 (15%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ +G+ EA +T M G P+ T ++LLS CA + L LG +H
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA--LTLGKRVH 245
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K+GL RN + LLD+YA+ GR++ A +FD M K+S +W
Sbjct: 246 VYMIKVGLTRN-LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW------------- 291
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTIISVLNA 224
T+L+ G G+ +EA+E F+ M+ G+ P +T + +L A
Sbjct: 292 ------------------TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRMH-KRTL 281
C++ G + G R +++++K ++ + ++DL +R G ++ A + + M + +
Sbjct: 334 CSHCGMVKEGFEYFRR-MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 392
Query: 282 VSWNSIIVGFAVNG 295
V W +++ V+G
Sbjct: 393 VIWRTLLGACTVHG 406
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 173/471 (36%), Positives = 261/471 (55%), Gaps = 44/471 (9%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRN---NVMVGTAL 124
F RM G P T +++L+ A L G IHG + + RN NV + AL
Sbjct: 143 FKRMQREGFEPTEYTIVSILNASAQLSD--LRYGKQIHGSI----IVRNFLGNVFIWNAL 196
Query: 125 LDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD-------------------- 164
DMYAK G ++ A +FD + K+ +WN MI GY + G
Sbjct: 197 TDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQ 256
Query: 165 ---------------IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
++ A R+F E +D + WTA++ G+ K G E+AL F EM +
Sbjct: 257 VTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLE 316
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
+EPD T+ SV+++CA + +L G +H + +N+ V + LID+YS+CG I+ A
Sbjct: 317 HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDA 376
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
R VF M R +VSWN++IVG A NG +ALE F +M ++ FKPD V+F G L+AC H
Sbjct: 377 RSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHC 436
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
IE G YFD + + ++P ++HY C+V+L R GR+E A+ +++NM P+ ++ +
Sbjct: 437 NWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWST 496
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
LL+ C TKGDI+ AE ++L +LDP + Y++L+NMYA++G+W +R MK + +
Sbjct: 497 LLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNV 556
Query: 450 QKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+K G S IEI + +H F + DR+H ESE IY L +L L+ G+ P T
Sbjct: 557 KKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNT 607
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 177/332 (53%), Gaps = 13/332 (3%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
LL +YAKFG++ A +FD M + F+WNA++ Y + G I++ FD MP RD++S+
Sbjct: 64 LLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSY 123
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
+ GF +E+LE F+ MQ G EP TI+S+LNA A + L G IH ++
Sbjct: 124 NTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIV 183
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
++F NV + N L D+Y++CG IE AR +F + K+ LVSWN +I G+A NG + +
Sbjct: 184 RNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGL 243
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
+ M+ G PD V+ + + A G +++ R F K+ I + ++ Y+
Sbjct: 244 LHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKE-----KDIVCWTAMMVGYA 298
Query: 364 RAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
+ GR EDAL + M ++P+ L S++++C + + + + + G+++N
Sbjct: 299 KNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAV--HGKSILAGLNNN 356
Query: 421 YVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
++ L +MY+ G D A + M R +
Sbjct: 357 LLVSSALIDMYSKCGFIDDARSVFNLMPTRNV 388
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 177/455 (38%), Positives = 264/455 (58%), Gaps = 34/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ WT+ I +SG AEA + M G PN +T+ ++L+ C+ P+ L G IH
Sbjct: 395 ISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSS-PA-ALEWGRRIH 452
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + GL + VG L++MY+ G +
Sbjct: 453 QQVVEAGL-ATDAHVGNTLVNMYSMCG-------------------------------SV 480
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A ++FD M RD +++ A++ G+ +EAL+ F +Q G++PD VT I++LNAC
Sbjct: 481 KDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNAC 540
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN G+L IH V K F + V N L+ Y++CG A VF++M KR ++SWN
Sbjct: 541 ANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWN 600
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+II G A +G +AL+ F M+ EG KPD V+F L+ACSHAGL+E+G RYF M +
Sbjct: 601 AIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQD 660
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ + P IEHYGC+VDL RAG+L++A +++ MP + N + G+LL ACR G++ +AER
Sbjct: 661 FAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAER 720
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ + LD YV L++MYAA G WD A K+R+ M+ RG+ K+PG S I++G +H
Sbjct: 721 AAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLH 780
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F+A DRSH +SE IY+ L+ L+ +K+ GYVP+T
Sbjct: 781 YFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDT 815
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 213/438 (48%), Gaps = 77/438 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W + I G EA+ + +M G PN IT++ LL+ C + S L G IH
Sbjct: 294 IAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVN--SAALHWGKEIH 351
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V K G +++ V AL+ MY+ R G I
Sbjct: 352 SRVAKAGFT-SDIGVQNALISMYS-------------------------------RCGSI 379
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A +FD+M +D ISWTA++ G K G+ EAL ++EMQ +GVEP+ VT S+LNAC
Sbjct: 380 KDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNAC 439
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++ L G IH+ V++ + V NTL+++YS CG ++ ARQVF RM +R +V++N
Sbjct: 440 SSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYN 499
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK- 344
++I G+A + EAL+ F+ +Q+EG KPD V++ L AC+++G +E +++K
Sbjct: 500 AMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKG 559
Query: 345 ----------------------------IYRVSPR-IEHYGCIVDLYSRAGRLEDALNVV 375
+++ R + + I+ ++ GR +DAL +
Sbjct: 560 GFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLF 619
Query: 376 ENMPM---KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD------PGVDSNYVLLAN 426
E M M KP+ V SLL+AC G L E +Y + P ++ +Y + +
Sbjct: 620 ERMKMEGVKPDIVTFVSLLSACSHAG---LLEEGRRYFCSMSQDFAIIPTIE-HYGCMVD 675
Query: 427 MYAAVGKWDGAGKIRRTM 444
+ G+ D A + +TM
Sbjct: 676 LLGRAGQLDEAEALIKTM 693
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 175/343 (51%), Gaps = 41/343 (11%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSGCADFPSQC 97
K V WT +I + GR +E A E F +M G PN IT+I++L+ + P+
Sbjct: 186 KMEKKSVVSWTITIGGYADCGR-SETAFEIFQKMEQEGVVPNRITYISVLNAFSS-PA-A 242
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L G +H + G + ++ VGTAL+ MYAK G
Sbjct: 243 LKWGKAVHSRILNAGHE-SDTAVGTALVKMYAKCG------------------------- 276
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
+ ++F+++ RD I+W ++ G + GY+EEA E + +MQ GV P+ +T
Sbjct: 277 ------SYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKIT 330
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+ +LNAC N L G IH V K F ++ V N LI +YSRCG I+ AR VF +M
Sbjct: 331 YVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMV 390
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
++ ++SW ++I G A +GF EAL + MQ+ G +P+ V++T L ACS +E G R
Sbjct: 391 RKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRR 450
Query: 338 YFDIMKKIYRVSPRIE-HYG-CIVDLYSRAGRLEDALNVVENM 378
I +++ + H G +V++YS G ++DA V + M
Sbjct: 451 ---IHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM 490
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 189/437 (43%), Gaps = 70/437 (16%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + + + + G I +A +M HG P+ T ++ LS C P L G IH
Sbjct: 94 WNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKS-PG-ALEWGREIHFQ 151
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ GL +V V +L+MYAK G IE
Sbjct: 152 AMQAGL-LFDVKVANCILNMYAKCG-------------------------------SIEE 179
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +FD+M + +SWT + G+ G E A E F++M+ GV P+ +T ISVLNA ++
Sbjct: 180 AREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSS 239
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
L G +H +L + + V L+ +Y++CG + RQVF+++ R L++WN++
Sbjct: 240 PAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTM 299
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G A G+ EA E +N MQ+EG P+ +++ L AC ++ + G + K
Sbjct: 300 IGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGF 359
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK-------------------------- 381
S I ++ +YSR G ++DA V + M K
Sbjct: 360 TSD-IGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQ 418
Query: 382 --------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-VLLANMYAAVG 432
PN V S+L AC + + R+ + +V+ D++ L NMY+ G
Sbjct: 419 EMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCG 478
Query: 433 KWDGAGKIRRTMKGRGI 449
A ++ M R I
Sbjct: 479 SVKDARQVFDRMIQRDI 495
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 132/244 (54%), Gaps = 21/244 (8%)
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV--RDAISWTALLNGFVKRGYFEEALECF 203
V +T NA+I+ Y++ G IE A +++ ++ R SW A++ G+++ GY E+AL+
Sbjct: 55 VPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLL 114
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
R+MQ G+ PD TI+S L++C + G L G IH ++ +VKV N ++++Y++C
Sbjct: 115 RQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKC 174
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
G IE AR+VF +M K+++VSW I G+A G A E F M++EG P+ +++ L
Sbjct: 175 GSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVL 234
Query: 324 TACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG---------CIVDLYSRAGRLEDALNV 374
A S ++ G V RI + G +V +Y++ G +D V
Sbjct: 235 NAFSSPAALKWG----------KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQV 284
Query: 375 VENM 378
E +
Sbjct: 285 FEKL 288
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 102/186 (54%), Gaps = 5/186 (2%)
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
A++ + +Q G + + + +L C V L G +H+++++ + N LI+
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 259 LYSRCGCIEFARQVFQRMH--KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
+Y +CG IE ARQV++++ +RT+ SWN+++VG+ G++ +AL+ MQ+ G PD
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 317 VSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
+ L++C G +E G +F M+ ++ + CI+++Y++ G +E+A V
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVAN--CILNMYAKCGSIEEAREVF 184
Query: 376 ENMPMK 381
+ M K
Sbjct: 185 DKMEKK 190
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 85/186 (45%), Gaps = 18/186 (9%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K T + W + I + GR +A F RM + G P+ +TF++LLS C+
Sbjct: 590 KMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACS------- 642
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGT-----ALLDMYAKFGRMDLATVVFDAMRVKS-SFTW 152
G + G + ++ ++ T ++D+ + G++D A + M ++ + W
Sbjct: 643 HAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIW 702
Query: 153 NAMIDGYMRRGDIESAVRMFD---EMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
A++ G++ A R + ++ + +A+ + AL + + G ++ A + + M+
Sbjct: 703 GALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQR 762
Query: 210 GV--EP 213
GV EP
Sbjct: 763 GVTKEP 768
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 181/464 (39%), Positives = 265/464 (57%), Gaps = 8/464 (1%)
Query: 42 VNPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
V P V W +S RSGR +A L RM G P+ LS D + +
Sbjct: 117 VEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGD--VAV 174
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +HG V K G R + V TAL+DMY K GR D VFD + NA++ G
Sbjct: 175 GEQLHGYVVKAGC-RLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLS 233
Query: 161 RRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
R + A+R+F E R + +SWT+++ V+ G EA++ FREMQ G+EP+ V
Sbjct: 234 RNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSV 293
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
TI VL A AN+ L G H + L++ F ++ V + L+D+Y++CG + AR +F+ M
Sbjct: 294 TIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAM 353
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
R +VSWN++I G+A++G A+ F SMQ KPD V+FT L ACS AG E+G
Sbjct: 354 PYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGR 413
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
YF+ M+ + +SPR+EHY C+V L RAG+L+DA +++ MP +P+ + GSLL +CR
Sbjct: 414 SYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRV 473
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
G+++LAE + L L+P NYVLL+N+YA+ WDG ++R MK G++K+ G S
Sbjct: 474 HGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCS 533
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IEI + +H +AGD SH I L+ L+ +++ G+ P T
Sbjct: 534 WIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPST 577
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 144/340 (42%), Gaps = 46/340 (13%)
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
G+ R+ V ++LL Y +FG A V D M ++ W+A+I + GD E A +
Sbjct: 50 GVSRD-AFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGL 108
Query: 172 FDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+ M + I+W L++G + G +A+ M G PD + L+A +
Sbjct: 109 LERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGD 168
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG----------------------- 264
VG + +G +H YV+K + + V LID+Y +CG
Sbjct: 169 VGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNAL 228
Query: 265 ------------CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
+ R+ R + +VSW SI+ NG EA++ F MQ EG
Sbjct: 229 VAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGI 288
Query: 313 KPDGVSFTGALTACSHAGLIEDG--LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
+P+ V+ L A ++ + G F + K + I +VD+Y++ GR+ D
Sbjct: 289 EPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHH---DIYVGSALVDMYAKCGRVRD 345
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
A + E MP + N V +++ G+ A RL + +
Sbjct: 346 ARMIFEAMPYR-NVVSWNAMIGGYAMHGEAENAVRLFRSM 384
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 155/383 (40%), Positives = 246/383 (64%), Gaps = 1/383 (0%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
+V++ + L+ Y + M A +FD M + + +WNAM++GY G++E ++FDEMP
Sbjct: 206 DVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMP 265
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGL 235
R+ SW L+ G+VK G F E LE F+ M + G V P+ T+++VL+AC+ +G L +G
Sbjct: 266 ERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGK 325
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
W+H Y +K N+ V N LID+Y++CG IE A VF + ++ ++SWN+II G A++G
Sbjct: 326 WVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHG 385
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
+AL F+ M+ EG +PDGV+F G L+AC+H GL++DG YF M Y + P+IEHY
Sbjct: 386 HAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHY 445
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
GC+VDL RAG L+ ALN + MP++P+ V+ +LL ACR ++ +AE ++ L++L+P
Sbjct: 446 GCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIELEP 505
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
+N+V+++N+Y +G+ + +++ M+ G +K PG S IE + EF + D H
Sbjct: 506 NNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHS 565
Query: 476 ESEHIYSMLELLSFDLKLCGYVP 498
E+E IY +L+ L+ L+ GYVP
Sbjct: 566 ETESIYRVLKGLTMLLRSHGYVP 588
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 158/389 (40%), Gaps = 78/389 (20%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
FITLL C ++ I + GL+ N+ V + ++F R+ A +FD
Sbjct: 15 FITLLRSCKNYERL-----HQIQAQIVTHGLEHND-FVAPNFITTCSRFKRIHHARKLFD 68
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
+ ++ TWNAM GY++ G V +F E+
Sbjct: 69 KIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELN-------------------------- 102
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
+I+G+ P+ T ++ +C + + G +H K FK N V +LID+YS+
Sbjct: 103 ----RIAGM-PNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSK 157
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN----------------- 305
GC+E A +VF MH+R +V W +II G+ + G V F+
Sbjct: 158 KGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGY 217
Query: 306 ------SMQKEGFKP----DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
+ +E F D +S+ L + G +E + FD M + + +
Sbjct: 218 IESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPE-----RNVFSW 272
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMK----PNEVVLGSLLAACRTKGDIILAERLMKYLV 411
++ Y + G + L + M ++ PN+ L ++L+AC G + + + + Y
Sbjct: 273 NGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAE 332
Query: 412 DLDPGVDSNYV---LLANMYAAVGKWDGA 437
+ G N +L +MYA G + A
Sbjct: 333 SI--GYKGNLFVGNVLIDMYAKCGVIENA 359
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 272/458 (59%), Gaps = 12/458 (2%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
NP V WTS +S H R G + E + F +M + G P +LS CAD + L G
Sbjct: 239 NP-VTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLAT--LNSGQ 295
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
MIHG + K G + + + AL+ +Y K G + A +F M+VK+ +WNA+I +
Sbjct: 296 MIHGYMVKGGFN-DYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAES 354
Query: 163 GDIESAVRMFDEMPVRDA--------ISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
G + A+ + ++ +A I+W+A++ GF +G EE+LE FR+MQ++ V+ +
Sbjct: 355 GVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEESLEVFRKMQLANVKAN 414
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
VTI SVL+ CA + L +G +H +V++ DNV V N LI++Y++CG + VF+
Sbjct: 415 SVTIASVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINMYTKCGSFKPGFMVFE 474
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
++ R +SWNS+I G+ +G +AL FN M K G++PDGV+F AL+ACSHAGL+ +
Sbjct: 475 KLENRDSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVTFIAALSACSHAGLVAE 534
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
G F M++ +++ P IEHY C+VDL RAG +E+A N+++ MPM+PN + SLL +C
Sbjct: 535 GHWLFSQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKGMPMEPNAYIWSSLLNSC 594
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPG 454
R D LAE + +L+ + +++LL+N++AA +W+ + ++R + + +G++K PG
Sbjct: 595 RMHKDTDLAEEAAAKISNLNSKITGSHMLLSNIFAASCRWEDSARVRISARAKGLKKVPG 654
Query: 455 LSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
S IE+ ++ F AG E + +L L+F ++
Sbjct: 655 WSWIEVKKKVYMFKAGYTISEGLEKVDEILHDLAFQIE 692
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 163/309 (52%), Gaps = 21/309 (6%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM---- 103
W S I + G EA + +M +G + TF LL ++ LGA
Sbjct: 107 WNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSN-------LGAFNMCK 159
Query: 104 -IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H V + G +N++ VG L+ MYAK RMD A VFD MR+KS +WN M+ GY
Sbjct: 160 NLHCHVVQFGF-QNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYN 218
Query: 163 GDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
D+ A RMF +M + + ++WT+LL+ + G+ EE + F +M++ GV P +
Sbjct: 219 YDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEML 278
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
VL+ CA++ TL G IH Y++K F D + N LI LY + G + A ++F M
Sbjct: 279 AVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKV 338
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQK-EGF---KPDGVSFTGALTACSHAGLIED 334
+ LVSWN++I FA +G +ALE + ++K E + KP+ ++++ + + GL E+
Sbjct: 339 KNLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEE 398
Query: 335 GLRYFDIMK 343
L F M+
Sbjct: 399 SLEVFRKMQ 407
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 174/383 (45%), Gaps = 53/383 (13%)
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR---DAISWTALLNGFVKR 193
ATVV A S+F ++ Y R G + A ++F P + + W +++ V
Sbjct: 60 ATVVTGA--YCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYSNFLLWNSIIRANVYH 117
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
GY EAL+ + +M+ GV D T +L A +N+G + +H +V++ F++++ V
Sbjct: 118 GYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVG 177
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
N LI +Y++ ++ AR+VF +M +++VSWN+++ G+A N V A F+ M+ EG +
Sbjct: 178 NELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVE 237
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
P+ V++T L+ SHA R G LE+ +
Sbjct: 238 PNPVTWTSLLS--SHA----------------------------------RCGHLEETMV 261
Query: 374 VVENMPMK---PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN---- 426
+ M MK P +L +L+ C + + + Y+V G ++Y+ N
Sbjct: 262 LFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMIHGYMV---KGGFNDYLFAKNALIT 318
Query: 427 MYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE- 485
+Y G A K+ MK + + L S SG+++ S +E Y ++
Sbjct: 319 LYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKP 378
Query: 486 -LLSFDLKLCGYVPETVAGELYE 507
++++ +CG+ + + E E
Sbjct: 379 NVITWSAIICGFASKGLGEESLE 401
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 180/460 (39%), Positives = 266/460 (57%), Gaps = 5/460 (1%)
Query: 41 TVNPTVQ-WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
T NP V +T+ I SG EA ++RM P++ ++L C L
Sbjct: 107 THNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGS--QLALR 164
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
G +H KLG N +V ++++Y K G + A VF+ M + MI Y
Sbjct: 165 EGREVHSRALKLGFSSNR-LVRLRIMELYGKCGELGDARRVFEEM-PEDVVASTVMISSY 222
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+G +E A +F + +D + WTA+++GFV+ ALE FR MQ V P+ TI+
Sbjct: 223 SDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIV 282
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
VL+AC+ +G L IG W+H Y+ K + + N+ V N LI++YSRCG I+ A+ VF M R
Sbjct: 283 CVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDR 342
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
++++N++I G ++NG +A+E F M +P V+F G L ACSH GL++ G F
Sbjct: 343 DVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIF 402
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M + YRV P+IEHYGC+VDL R GRLE+A +++ M M P+ ++LG+LL+AC+ +
Sbjct: 403 HSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKN 462
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E++ K L D YVLL+++YA+ GKW A ++R MK G+QK+PG SSIE
Sbjct: 463 LELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIE 522
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+ + IHEF+ GD H + E IY LE L+ L+L GY PE
Sbjct: 523 VNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPE 562
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 143/348 (41%), Gaps = 69/348 (19%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A R+F + +TAL++GFV G + EA++ + M + PD + S+L A
Sbjct: 97 IDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKA 156
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ---------- 274
C + L G +H LK F N V +++LY +CG + AR+VF+
Sbjct: 157 CGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAST 216
Query: 275 --------------------RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
R+ ++ V W ++I GF N ALE F MQ E +P
Sbjct: 217 VMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRP 276
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
+ + L+ACS G +E G M+K + + + ++++YSR G +++A V
Sbjct: 277 NEFTIVCVLSACSQLGALEIGRWVHSYMRK-FEIELNLFVGNALINMYSRCGSIDEAQTV 335
Query: 375 VENMP----------------------------------MKPNEVVLGSLLAACRTKGDI 400
+ M ++P V +L AC G +
Sbjct: 336 FDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLV 395
Query: 401 ILAERLMKYLV---DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+ + ++P ++ +Y + ++ VG+ + A + RTMK
Sbjct: 396 DFGFEIFHSMARDYRVEPQIE-HYGCMVDLLGRVGRLEEAYDLIRTMK 442
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 4/166 (2%)
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
D IIS+L ++ + L IH +++ + + L+ S+C I++A ++F
Sbjct: 48 DQKQIISLLQRSRHINQV---LPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIF 104
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
Q H + + ++I GF +G EA++ ++ M E PD L AC +
Sbjct: 105 QYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALR 164
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
+G K+ S R+ I++LY + G L DA V E MP
Sbjct: 165 EGREVHSRALKLGFSSNRLVRLR-IMELYGKCGELGDARRVFEEMP 209
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 169/436 (38%), Positives = 262/436 (60%), Gaps = 5/436 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPS--QCLFLGAMIHGLVCKLGLDRNNVMVGTALL 125
+ + G +P T +LL A P+ L +H KLGL ++V AL+
Sbjct: 194 YAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAVHAHAVKLGL-AGFLLVSNALI 252
Query: 126 DMYAK-FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWT 184
++A GR+ A V+ + T+N +I Y R G + A +FDEMP R+A+SW+
Sbjct: 253 RVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRVTDARALFDEMPARNAVSWS 312
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
A++NG+V+ G EAL F MQ GV PD ++ VL ACA +G L G W+H Y+
Sbjct: 313 AMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKAN 372
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
+ + V + L+D+Y++CG ++ A +VF+ M ++ +++W ++I G A++G EALE F
Sbjct: 373 NIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELF 432
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
+ M++ G KPD ++F GAL AC+H GL++ G FD M + Y + P+IEHYGC+VDL +R
Sbjct: 433 SQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLAR 492
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLL 424
G L +A +VE MPMKP+ ++ G+L+A CR ++ LAE ++K+ ++L+P YVLL
Sbjct: 493 NGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLL 552
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
N+YAA G+ A +IR M+ +G+ K PG S++EI IH+F+ GD SH E I S
Sbjct: 553 GNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKW 612
Query: 485 ELLSFDLKL-CGYVPE 499
+ + ++L GYVP+
Sbjct: 613 DEIDSRIRLEEGYVPD 628
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 111/248 (44%), Gaps = 36/248 (14%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ ++ + ++G EA F RM G P+ + +L+ CA L G +
Sbjct: 308 AVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQL--GVLEQGKWV 365
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + K R V +GTAL+DMYAK G M LA VF M+ K+ W MI G G
Sbjct: 366 HGYL-KANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHG- 423
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
RG EALE F +M+ GV+PD + I L A
Sbjct: 424 ----------------------------RG--SEALELFSQMERLGVKPDDIAFIGALCA 453
Query: 225 CANVGTLGIGLWI-HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLV 282
C + G + G + V K K ++ ++DL +R G + AR++ ++M K +
Sbjct: 454 CTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDAL 513
Query: 283 SWNSIIVG 290
W +++ G
Sbjct: 514 IWGALMAG 521
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 180/462 (38%), Positives = 273/462 (59%), Gaps = 8/462 (1%)
Query: 41 TVNPT-VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
T +PT + +TS+I H G + M G P T L C + L
Sbjct: 82 TKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPAC-----RGLS 136
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
LG +H KL L ++ V TALL MYA+ G A +FD M + AM+ Y
Sbjct: 137 LGRALHAYAFKLALSGDS-YVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCY 195
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
G ++ A R+FD +P +D I W A+++G+ + G EAL+ FR M S EPD VT++
Sbjct: 196 ANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVV 255
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQD-FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
VL+A A +GT+ G W+H YV + NV+V L+D+Y +CG +E A VF +
Sbjct: 256 LVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGN 315
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +V WN++I G+A++G +ALE F ++ +G P ++F G L ACSH+GL+E+G +
Sbjct: 316 KDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSF 375
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M+ Y + P+IEHYGC+VDL RAG +E+A ++V+++ + P+ V+ SLLAACR
Sbjct: 376 FQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHK 435
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ L +R+ +LV Y+LL+N+YAAVGKW+ ++R MK GIQK+PG S+I
Sbjct: 436 NMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAI 495
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
EI ++EF+AGD SH ++ IY+ML+ ++ +K G+VP+T
Sbjct: 496 EIDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKEHGHVPQT 537
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 109/273 (39%), Gaps = 35/273 (12%)
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
Y G ++ ++ + I +T+ ++ RG L +M G+ P T
Sbjct: 65 AYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHT 124
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL------------------ 259
+ + L AC L +G +H Y K + V L+ +
Sbjct: 125 LSASLPACRG---LSLGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMP 181
Query: 260 -------------YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
Y+ G ++ AR++F + ++ + WN++I G+ +G EAL+ F
Sbjct: 182 DPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRR 241
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M + +PD V+ L+A + G +E G +K V + +VD+Y + G
Sbjct: 242 MLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCG 301
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
LEDA+ V + K + VV +++ GD
Sbjct: 302 SLEDAVAVFHGIGNK-DIVVWNAMINGYAMHGD 333
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 186/459 (40%), Positives = 265/459 (57%), Gaps = 18/459 (3%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T T W I H RS ++ F RMTL G N T+ LLS C S+
Sbjct: 86 TAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVR--SRLFRE 143
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR-----MDLATVVFDAMRVKSSFTWNAM 155
G IHG V G +N+ V T L+++YA G + A +FD M + WN++
Sbjct: 144 GEQIHGRVLVNGY-WSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNSL 202
Query: 156 IDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
+ GY+RRGD + A ++FDEMP R+ +WT ++ GF + G + AL F +M+ +GVE D
Sbjct: 203 LAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQ 262
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLK----QDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
V +++ L+ACA +G L +G WIH YV + + V + N LI +Y+ CG ++ A +
Sbjct: 263 VALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYK 322
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG---FKPDGVSFTGALTACSH 328
VF+ + +R VSW+SII GFA G EA+ F M G +PD ++F GALTACSH
Sbjct: 323 VFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSH 382
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
AGLI DG+R F M K + V P+IEHYGC+VDL SRAG L +AL+++E+MPMKPN V G
Sbjct: 383 AGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWG 442
Query: 389 SLLAACRTKGDIILAERLMKYL-VDLDPGVDSN--YVLLANMYAAVGKWDGAGKIRRTMK 445
+LL+ CR + + + K+L ++ P + ++LLAN+YAA G+W +RR M
Sbjct: 443 ALLSGCRLHKNDEIVSHVAKHLSFEIHPNNQAAGYFMLLANVYAADGRWQDTATVRRNMH 502
Query: 446 GRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
G++K G S IEI + FM G+ +H + IY ML
Sbjct: 503 DIGVKKPSGRSWIEINGVLCSFMVGEETHKDVNLIYEML 541
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 157/335 (46%), Gaps = 15/335 (4%)
Query: 85 TLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM 144
++L C F + A IH + G + N ++ LL +Y FG + A VF+ +
Sbjct: 32 SVLKSCVSFRNL-----AKIHAQIVVSGFSQKNYIL-NHLLSLYISFGSLGSAQKVFEDI 85
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV----RDAISWTALLNGFVKRGYFEEAL 200
S+ WN +I G+ R + ++ +F M + + +++ LL+ V+ F E
Sbjct: 86 TAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGE 145
Query: 201 ECFREMQISGVEPDYVTIISVLNACANVGTLG-IGLWIHRYVLKQDFKDNVKVCNTLIDL 259
+ + ++G + +++N AN G G L RY+ + NV N+L+
Sbjct: 146 QIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNSLLAG 205
Query: 260 YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
Y R G + AR+VF M +R + +W ++ GFA NG AL F+ M++ G + D V+
Sbjct: 206 YVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVAL 265
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKIYR---VSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
AL+AC+ G + G +++ +R + + ++ +Y+ G ++ A V E
Sbjct: 266 VAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYKVFE 325
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
+P + N V S++ +G + A R+ + ++
Sbjct: 326 EIPQR-NTVSWSSIITGFAKQGCGVEAIRIFQLML 359
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 97/237 (40%), Gaps = 42/237 (17%)
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I SVL +C + L IH ++ F + N L+ LY G + A++VF+ +
Sbjct: 30 IFSVLKSCVSFRNLAK---IHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDIT 86
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+ WN II G + +++E F M G + +G +++ L+AC + L +G
Sbjct: 87 APSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREG-- 144
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
++ R+ G +LY R L +L A
Sbjct: 145 --------EQIHGRVLVNGYWSNLYVRTN--------------------LINLYANGGDG 176
Query: 398 GDIILAERLMKYLVDLDPGVDSNYV----LLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
GD L + +YL D P DSN V LLA Y G +DGA K+ M R ++
Sbjct: 177 GDFDL--KRARYLFDEMP--DSNVVGWNSLLAG-YVRRGDFDGARKVFDEMPERNVR 228
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 170/431 (39%), Positives = 266/431 (61%), Gaps = 13/431 (3%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
FT+M +G P++ T +L CA LG M+HG KLGL ++ VG +L+ M
Sbjct: 93 FTKMLHNGLGPDNYTIPYVLKACAALRD--CSLGKMVHGYSSKLGL-VFDIFVGNSLMAM 149
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y+ G + A VFD M S+ +W+ MI GY + GD++SA FDE P +D W A++
Sbjct: 150 YSVCGDVIAARHVFDEMPRLSAVSWSVMISGYAKVGDVDSARLFFDEAPEKDRGIWGAMI 209
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
+G+V+ F+E L FR +Q++ V PD +S+L+ACA++G L IG+WIHRY+ ++
Sbjct: 210 SGYVQNSCFKEGLYLFRLLQLTHVVPDESIFVSILSACAHLGALDIGIWIHRYLNRKTVS 269
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
++++ +L+D+Y++CG +E A+++F M +R +V WN++I G A++G AL+ F+ M
Sbjct: 270 LSIRLSTSLLDMYAKCGNLELAKRLFDSMPERDIVCWNAMISGLAMHGDGASALKMFSEM 329
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+K G KPD ++F TACS++G+ +GL+ D M +Y + P+ EHYGC+VDL SRAG
Sbjct: 330 EKTGIKPDDITFIAVFTACSYSGMAHEGLQLLDKMSSLYEIEPKSEHYGCLVDLLSRAGL 389
Query: 368 LEDALNVVENMPMKP---NEVVLG--SLLAACRTKGDIILAERLMKYLVDLD--PGVDSN 420
+A+ ++ + +E L + L+AC G LAER K L+ L+ GV
Sbjct: 390 FGEAMVMIRRITSTSWNGSEETLAWRAFLSACCNHGQAQLAERAAKRLLRLENHSGV--- 446
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHI 480
YVLL+N+YAA GK A ++R M+ +G+ K PG SS+EI + EF+AG+ +H + E I
Sbjct: 447 YVLLSNLYAASGKHSDARRVRNMMRNKGVDKAPGCSSVEIDGVVSEFIAGEETHPQMEEI 506
Query: 481 YSMLELLSFDL 491
+S+LE+L L
Sbjct: 507 HSVLEILHMQL 517
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 39/272 (14%)
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+G + A R+F+ + ++ F+ G F F +M +G+ PD TI V
Sbjct: 52 QGSLTYACRVFERIHHPTLCICNTIIKTFLVNGNFYGTFHVFTKMLHNGLGPDNYTIPYV 111
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L ACA + +G +H Y K ++ V N+L+ +YS CG + AR VF M + +
Sbjct: 112 LKACAALRDCSLGKMVHGYSSKLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEMPRLSA 171
Query: 282 VSWNSIIVGFAVNGFVGEALEYF--------------------NSMQKEGFK-------- 313
VSW+ +I G+A G V A +F NS KEG
Sbjct: 172 VSWSVMISGYAKVGDVDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLT 231
Query: 314 ---PDGVSFTGALTACSHAGLIEDGL---RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
PD F L+AC+H G ++ G+ RY + +K +S R+ ++D+Y++ G
Sbjct: 232 HVVPDESIFVSILSACAHLGALDIGIWIHRYLN--RKTVSLSIRLS--TSLLDMYAKCGN 287
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
LE A + ++MP + + V ++++ GD
Sbjct: 288 LELAKRLFDSMPER-DIVCWNAMISGLAMHGD 318
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 178/468 (38%), Positives = 276/468 (58%), Gaps = 14/468 (2%)
Query: 39 KSTVNPTVQ-WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
+ T NP V +TS I G +A F +M ++ +L C +
Sbjct: 83 RCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACV--LQRA 140
Query: 98 LFLGAMIHGLVCK--LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAM 155
L G +HGLV K LGLDR+ + L+++Y K G ++ A +FD M + M
Sbjct: 141 LGSGKEVHGLVLKSGLGLDRS---IALKLVELYGKCGVLEDARKMFDGMPERDVVACTVM 197
Query: 156 IDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
I G +E A+ +F+EM RD + WT +++G V+ G F LE FREMQ+ GVEP+
Sbjct: 198 IGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNE 257
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
VT + VL+ACA +G L +G WIH Y+ K + N V LI++YSRCG I+ A+ +F
Sbjct: 258 VTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDG 317
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+ + + ++NS+I G A++G EA+E F+ M KE +P+G++F G L ACSH GL++ G
Sbjct: 318 VRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLG 377
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
F+ M+ I+ + P +EHYGC+VD+ R GRLE+A + + M ++ ++ +L SLL+AC+
Sbjct: 378 GEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLSACK 437
Query: 396 TKGDIILAERLMKYLVD---LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
+I + E++ K L + +D G ++++L+N YA++G+W A ++R M+ GI K+
Sbjct: 438 IHKNIGMGEKVAKLLSEHYRIDSG---SFIMLSNFYASLGRWSYAAEVREKMEKGGIIKE 494
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
PG SSIE+ + IHEF +GD H E + IY LE L++ K GY+P T
Sbjct: 495 PGCSSIEVNNAIHEFFSGDLRHPERKRIYKKLEELNYLTKFEGYLPAT 542
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 35/273 (12%)
Query: 143 AMRVKSS---FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
A++ ++S F ++ Y + I+ A+++F + +T+L++GFV G + +A
Sbjct: 50 AIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDA 109
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL 259
+ F +M V D + ++L AC LG G +H VLK + + L++L
Sbjct: 110 INLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVEL 169
Query: 260 YSRCGCIEFAR-------------------------------QVFQRMHKRTLVSWNSII 288
Y +CG +E AR +VF M R V W +I
Sbjct: 170 YGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVI 229
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
G NG LE F MQ +G +P+ V+F L+AC+ G +E G M+K
Sbjct: 230 DGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVE 289
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
R G ++++YSR G +++A + + + +K
Sbjct: 290 VNRFV-AGALINMYSRCGDIDEAQALFDGVRVK 321
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 103/244 (42%), Gaps = 18/244 (7%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
IH + +K + V L+ +Y + I+ A ++F+ + + S+I GF G
Sbjct: 46 IHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGS 105
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKKIYRVSPRIEHY 355
+A+ F M ++ D + T L AC + G ++K + I
Sbjct: 106 YTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALK 165
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
+V+LY + G LEDA + + MP + + V ++ +C G + E ++ ++
Sbjct: 166 --LVELYGKCGVLEDARKMFDGMPER-DVVACTVMIGSCFDCG---MVEEAIEVFNEMGT 219
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK-----------PGLSSIEIGSGI 464
+ ++ + G+++ ++ R M+ +G++ L ++E+G I
Sbjct: 220 RDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWI 279
Query: 465 HEFM 468
H +M
Sbjct: 280 HAYM 283
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 253/425 (59%), Gaps = 36/425 (8%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ +F +L CA S LG H + K+G + + +++ T LLD YAK G ++ A
Sbjct: 28 PSKTSFSLILRSCA--ISGEAQLGEAFHCQIMKMGFEYD-MILQTGLLDFYAKHGYVEEA 84
Query: 138 TVVFDAM--RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
+FD M R +S TWN MI Y++ G+ +A+ M
Sbjct: 85 RNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISM------------------------ 120
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
F++MQ V+P VT++S+L+ACA++G L +G WIH Y+ + K +V + N
Sbjct: 121 -------FQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNA 173
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
LID+Y +CG +E A VF + ++ + WNSIIVG +NG EA+ F M+KEG KPD
Sbjct: 174 LIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPD 233
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
GV+F G L+ CSH+GL+ G RYF M +Y + P +EHYGC+VDL RAG L++AL ++
Sbjct: 234 GVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELI 293
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
MPMKPN +VLGSLL AC+ D L E++ + L++LDP NYV L+N+YA++ +WD
Sbjct: 294 RAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWD 353
Query: 436 GAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCG 495
R+ M RG+ K PG SSIE+ + +HEF+AGD SH + I + L+ ++ +LK G
Sbjct: 354 DVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQG 413
Query: 496 YVPET 500
+VP T
Sbjct: 414 HVPNT 418
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 114/250 (45%), Gaps = 45/250 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W + IS + + G A F +M P +T ++LLS CA + L +G I
Sbjct: 98 SVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGA--LDMGEWI 155
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + L + +V++G AL+DMY K G ++ A VF + K+ F WN++I G
Sbjct: 156 HGYIRTKRL-KIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGL----- 209
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
G RG EEA+ F M+ G++PD VT + +L+
Sbjct: 210 ------------------------GMNGRG--EEAIAAFIVMEKEGIKPDGVTFVGILSG 243
Query: 225 CANVGTLGIGLWIHRYVLKQ----DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
C++ G L G RY + + V+ ++DL R G ++ A ++ + M +
Sbjct: 244 CSHSGLLSAG---QRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKP 300
Query: 281 LVSWNSIIVG 290
NS+++G
Sbjct: 301 ----NSMVLG 306
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 118/273 (43%), Gaps = 41/273 (15%)
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
V P + +L +CA G +G H ++K F+ ++ + L+D Y++ G +E AR
Sbjct: 26 VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEAR 85
Query: 271 QVFQRMHKR--TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
+F M +R V+WN++I + G G A+ F MQ E KP V+ L+AC+H
Sbjct: 86 NLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAH 145
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN--------------- 373
G ++ G + + R+ + ++D+Y + G LE A++
Sbjct: 146 LGALDMG-EWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNS 204
Query: 374 -------------------VVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV--- 411
V+E +KP+ V +L+ C G + +R ++
Sbjct: 205 IIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVY 264
Query: 412 DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
L+PGV+ +Y + ++ G A ++ R M
Sbjct: 265 GLEPGVE-HYGCMVDLLGRAGYLKEALELIRAM 296
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/471 (36%), Positives = 261/471 (55%), Gaps = 44/471 (9%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRN---NVMVGTAL 124
F RM G P T +++L+ A L G IHG + + RN NV + AL
Sbjct: 143 FKRMQREGFEPTEYTIVSILNASAQLLD--LRYGKQIHGSI----IVRNFLGNVFIWNAL 196
Query: 125 LDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD-------------------- 164
DMYAK G ++ A +FD + K+ +WN MI GY + G
Sbjct: 197 TDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQ 256
Query: 165 ---------------IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
++ A R+F E +D + WTA++ G+ K G E+AL F EM +
Sbjct: 257 VTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLE 316
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
+EPD T+ SV+++CA + +L G +H + +N+ V + LID+YS+CG I+ A
Sbjct: 317 HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDA 376
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
R VF M R +VSWN++IVG A NG +ALE F +M ++ FKPD V+F G L+AC H
Sbjct: 377 RSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHC 436
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
IE G YFD + + ++P ++HY C+V+L R GR+E A+ +++NM P+ ++ +
Sbjct: 437 NWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWST 496
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
LL+ C TKGDI+ AE ++L +LDP + Y++L+NMYA++G+W +R MK + +
Sbjct: 497 LLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNV 556
Query: 450 QKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+K G S IEI + +H F + DR+H ESE IY L +L L+ G+ P T
Sbjct: 557 KKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNT 607
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 177/332 (53%), Gaps = 13/332 (3%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
LL +YAKFG++ A +FD M + F+WNA++ Y + G I++ FD MP RD++S+
Sbjct: 64 LLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSY 123
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
+ GF +E+LE F+ MQ G EP TI+S+LNA A + L G IH ++
Sbjct: 124 NTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIV 183
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
++F NV + N L D+Y++CG IE AR +F + K+ LVSWN +I G+A NG + +
Sbjct: 184 RNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGL 243
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
+ M+ G PD V+ + + A G +++ R F K+ I + ++ Y+
Sbjct: 244 LHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKE-----KDIVCWTAMMVGYA 298
Query: 364 RAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
+ GR EDAL + M ++P+ L S++++C + + + + + G+++N
Sbjct: 299 KNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAV--HGKSILAGLNNN 356
Query: 421 YVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
++ L +MY+ G D A + M R +
Sbjct: 357 LLVSSALIDMYSKCGFIDDARSVFNLMPTRNV 388
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 270/461 (58%), Gaps = 7/461 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W I + ++G EA + ++ + G TF+++L C+ + L G ++H
Sbjct: 274 VSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSV--KALAQGRLVH 331
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG-- 163
+ + GLD + V V TAL++MYAK G ++ A VF+AM+ + + W+ +I Y G
Sbjct: 332 SHILERGLD-SEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYG 390
Query: 164 -DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTIISV 221
D A ++FD + RD I W A++ +V+ G A++ FREM +G++PD VT I+V
Sbjct: 391 KDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAV 450
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L ACA++G L +H + + + + NV V NTLI++Y+RCG +E A ++F ++T+
Sbjct: 451 LEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTV 510
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSW +++ F+ G EAL+ F M EG KPD V++T L C+H G +E G RYF
Sbjct: 511 VSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTD 570
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M +++ ++P +H+ +VDL R+GRL DA ++E+MP +P+ V + L ACR G +
Sbjct: 571 MAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLE 630
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
L E + + +LDP + Y+ ++N+YAA G W+ +R+ M+ RG++K PGLS IE+
Sbjct: 631 LGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVD 690
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
+HEF +G + H ++ I L L ++ GYVP+T A
Sbjct: 691 GKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKA 731
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 184/416 (44%), Gaps = 42/416 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I+ + ++G EA + + RM L G +H+TF+++L C+ G IH
Sbjct: 76 VSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ-----GREIH 130
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V GLD + AL+ MYA+F G +
Sbjct: 131 NRVFYSGLDSFQSL-ANALVTMYARF-------------------------------GSV 158
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A RMF + RD SW A++ + G + AL F+EM+ ++P+ T I+V++
Sbjct: 159 GDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGF 217
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ L G IH ++ F ++ V LI++Y +CG AR+VF +M KR +VSWN
Sbjct: 218 STPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWN 277
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKK 344
+I + NG EALE + + EGFK +F L ACS + G L + I+++
Sbjct: 278 VMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILER 337
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ + +V++Y++ G LE+A V M + + V +L+ A + G A
Sbjct: 338 --GLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR-DAVAWSTLIGAYASNGYGKDAR 394
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+ K L + + Y G A KI R M G K ++ I +
Sbjct: 395 KARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAV 450
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 191/455 (41%), Gaps = 123/455 (27%)
Query: 32 SIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA 91
S+QT + S W + I H +SG + A F M PN T+I ++SG +
Sbjct: 167 SLQTRDETS-------WNAVILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFS 218
Query: 92 DFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT 151
+ L G IH + G D ++++V TAL++MY K G A VFD M+ + +
Sbjct: 219 --TPEVLPEGRKIHAEIVANGFD-SDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVS 275
Query: 152 WNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV 211
WN MI Y++ GD F EALE ++++ + G
Sbjct: 276 WNVMIGCYVQNGD-------------------------------FHEALELYQKLDMEGF 304
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
+ T +S+L AC++V L G +H ++L++ V V L+++Y++CG +E AR+
Sbjct: 305 KRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARK 364
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGE-------------------------------- 299
VF M R V+W+++I +A NG+ +
Sbjct: 365 VFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCA 424
Query: 300 --ALEYFNSMQ-KEGFKPDGVSFTGALTACS-----------HA---------------- 329
A++ F M G KPD V+F L AC+ HA
Sbjct: 425 VAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNT 484
Query: 330 --------GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM- 380
G +E+ R F K+ VS + +V +S+ GR +AL++ + M +
Sbjct: 485 LINMYARCGSLEEAERLFAAAKEKTVVS-----WTAMVAAFSQYGRYAEALDLFQEMDLE 539
Query: 381 --KPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
KP++V S+L C G + E+ +Y D+
Sbjct: 540 GVKPDDVTYTSILFVCTHGGSL---EQGWRYFTDM 571
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 175/414 (42%), Gaps = 88/414 (21%)
Query: 77 NPNHITFITLLSGCADFPSQC--LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
P+++TF+T+L C S C + G +H + +R+ MVG AL+ MY K +
Sbjct: 4 QPDNVTFLTVLCSC----SSCGDVAEGRALHERIRCSRFERDT-MVGNALISMYGKCDSL 58
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
A VF++M W R+ +SW A++ + + G
Sbjct: 59 VDARSVFESM------DWRQ-----------------------RNVVSWNAMIAAYAQNG 89
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
+ EAL + M + G+ D+VT +SVL AC+ +L G IH V + N
Sbjct: 90 HSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRVFYSGLDSFQSLAN 146
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
L+ +Y+R G + A+++FQ + R SWN++I+ + +G AL F M+ + KP
Sbjct: 147 ALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-MKP 205
Query: 315 DGVSFTGALTACS-----------HAGLIEDGL------------------------RYF 339
+ ++ ++ S HA ++ +G F
Sbjct: 206 NSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVF 265
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRT 396
D MKK VS + ++ Y + G +AL + + + M K + S+L AC +
Sbjct: 266 DKMKKRDMVS-----WNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSS 320
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGR 447
+ + ++ L+ G+DS + L NMYA G + A K+ MK R
Sbjct: 321 VKALAQGRLVHSHI--LERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR 372
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 152/376 (40%), Positives = 239/376 (63%), Gaps = 1/376 (0%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
+LD Y K G ++ A +F M ++ +W+ M+ GY ++GD+E A +FD+MP ++ ++W
Sbjct: 538 ILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTW 597
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
T +++ ++G +EA + F +M+ + VE D ++S+L ACA G+L +G IHRYV K
Sbjct: 598 TIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRK 657
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ-RMHKRTLVSWNSIIVGFAVNGFVGEALE 302
++ + VCN LID++ +CGC+ A VF ++ VSWNSII GFA++G +ALE
Sbjct: 658 RNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALE 717
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M+++GF PD V+ L+AC+H G +++G R+F M++ Y + P+IEHYGC++DL
Sbjct: 718 LFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLL 777
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
R G +++A++++++MP +PNEV+ GSLL+ACR ++ AE + L L P NY
Sbjct: 778 GRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYA 837
Query: 423 LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS 482
+L+N+YA G+W K R MKG G QK G S +E+ HEF GDR H +S+ I
Sbjct: 838 VLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISE 897
Query: 483 MLELLSFDLKLCGYVP 498
M++ LS +K G VP
Sbjct: 898 MVDRLSSHVKHVGCVP 913
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 151/382 (39%), Gaps = 113/382 (29%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD------------- 92
V W++ +S +C+ G + A + F +M + N +T+ ++S CA
Sbjct: 564 VSWSTMVSGYCKKGDLEMARVIFDKM----PSKNLVTWTIMVSACAQKGLVDEAGKLFAQ 619
Query: 93 --------------------FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFG 132
S L LG IH V K L R + V AL+DM+ K G
Sbjct: 620 MKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGR-STHVCNALIDMFCKCG 678
Query: 133 RMDLATVVFDAMRV-KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
++ A VFD V K S +WN++I G F
Sbjct: 679 CVNRADYVFDTETVQKDSVSWNSIIGG-------------------------------FA 707
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK--DN 249
G+ ++ALE F +M+ G PD VT+I+VL+AC ++G + G H +++D+
Sbjct: 708 MHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGR-RHFSNMERDYGIMPQ 766
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
++ +IDL R G I+ EA++ SM
Sbjct: 767 IEHYGCMIDLLGRGGLIK-------------------------------EAVDLIKSMP- 794
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDI-MKKIYRVSP-RIEHYGCIVDLYSRAGR 367
++P+ V + L+AC + + Y +I + ++ ++ P +Y + ++Y+ AG+
Sbjct: 795 --WEPNEVIWGSLLSACR----LHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQ 848
Query: 368 LEDALNVVENMPMKPNEVVLGS 389
D M ++ GS
Sbjct: 849 WSDMAKARMQMKGTGSQKTAGS 870
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I ++ NG +A + F+ M + D VS+ A+ A G + + FD M +
Sbjct: 474 NALIDAYSKNGGFSDARKVFDEMPER----DVVSWNTAMAAMVREGELAGVRKLFDEMPE 529
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
VS + I+D Y++AG +E A + + MP + N V ++++ KGD+ +A
Sbjct: 530 KDTVS-----WNTILDGYTKAGEVEAAFELFQRMPER-NVVSWSTMVSGYCKKGDLEMA- 582
Query: 405 RLMKYLVDLDPGVD-SNYVLLANMYAAVGKWDGAGKIRRTMK 445
+ + D P + + ++ + A G D AGK+ MK
Sbjct: 583 ---RVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMK 621
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/479 (36%), Positives = 265/479 (55%), Gaps = 28/479 (5%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD----FPSQCLF-- 99
+ W + + + R+ +A F RM + +++ T++SG A +Q LF
Sbjct: 124 ISWNCMMGGYVKRNRLVDARGIFDRMP----ERDEVSWNTMISGYAQNGELLEAQRLFEE 179
Query: 100 --------LGAMIHGLVCKLGLDR----------NNVMVGTALLDMYAKFGRMDLATVVF 141
AM+ G V LD N + A++ Y + RMD A +F
Sbjct: 180 SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELF 239
Query: 142 DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALE 201
+AM ++ +WN MI GY + GDI A FD MP RD+ISW A++ G+ + GY EEAL
Sbjct: 240 EAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALH 299
Query: 202 CFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
F EM+ G + T S L+ CA + L +G +H V+K + V N L+ +Y
Sbjct: 300 LFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYC 359
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
+CG I+ A VF+ + ++ +VSWN++I G+A +GF EAL F SM+K G PD V+ G
Sbjct: 360 KCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVG 419
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+ACSH GL++ G YF M + Y ++ +HY C++DL RAGRL+DA N+++NMP +
Sbjct: 420 VLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFE 479
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
P+ G+LL A R G+ L E+ K + +++P YVLL+N+YAA G+W G++R
Sbjct: 480 PDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMR 539
Query: 442 RTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
M+ RG++K PG S +E+ + IH F GD H E + IY+ LE L +K GYV T
Sbjct: 540 LRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSST 598
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 121/254 (47%), Gaps = 38/254 (14%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
++ W + I+ + +SG EA F M G N TF + LS CA+ + L LG +
Sbjct: 278 SISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAA--LELGKQV 335
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG V K GL+ + VG ALL MY K G +D A +VF+ + K +WN MI GY R
Sbjct: 336 HGRVVKAGLE-SGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYAR--- 391
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
G+ +EAL F M+ +G+ PD VT++ VL+A
Sbjct: 392 ----------------------------HGFGKEALMLFESMKKTGILPDDVTMVGVLSA 423
Query: 225 CANVGTLGIGLWIHRYVLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTL 281
C++ G + G + Y + QD+ N K +IDL R G ++ A+ + + M +
Sbjct: 424 CSHTGLVDKGT-EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDA 482
Query: 282 VSWNSIIVGFAVNG 295
+W +++ ++G
Sbjct: 483 ATWGALLGASRIHG 496
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 23/326 (7%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
+V+ A+L YA+ G + A +FD M K+S +WN M+ Y++ G IE A R+F+
Sbjct: 60 DVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKA 119
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
+ ISW ++ G+VKR +A F M E D V+ ++++ A G L L
Sbjct: 120 DWELISWNCMMGGYVKRNRLVDARGIFDRMP----ERDEVSWNTMISGYAQNGEL---LE 172
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
R + +D V ++ Y + G ++ AR+VF M ++ VSWN+II G+
Sbjct: 173 AQRLFEESPVRD-VFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKR 231
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG 356
+ +A E F +M + S+ +T + G I +FD M + +S +
Sbjct: 232 MDQARELFEAMPCQNVS----SWNTMITGYAQNGDIAQARNFFDRMPQRDSIS-----WA 282
Query: 357 CIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTKGDIILAERLMKYLVD- 412
I+ Y+++G E+AL++ M + N S L+ C + L +++ +V
Sbjct: 283 AIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKA 342
Query: 413 -LDPGVDSNYVLLANMYAAVGKWDGA 437
L+ G LL MY G D A
Sbjct: 343 GLESGCYVGNALLV-MYCKCGNIDDA 367
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 152/349 (43%), Gaps = 67/349 (19%)
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
++ + A ++FD M + +WNAM+ GY + G ++ A +FDEMP +++ISW +L
Sbjct: 42 RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAA 101
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
+V+ G E+A F + D+ I +G ++ R
Sbjct: 102 YVQNGRIEDARRLFES------KADWELI---------SWNCMMGGYVKR---------- 136
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
N L+D AR +F RM +R VSWN++I G+A NG + EA F +
Sbjct: 137 ----NRLVD----------ARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF----E 178
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
E D ++T ++ G++++ R FD M + VS + I+ Y + R++
Sbjct: 179 ESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMD 233
Query: 370 DALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS-NYVLLANMY 428
A + E MP + N +++ GDI A + D P DS ++ + Y
Sbjct: 234 QARELFEAMPCQ-NVSSWNTMITGYAQNGDIAQA----RNFFDRMPQRDSISWAAIIAGY 288
Query: 429 AAVG------------KWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
A G K DG ++ R+ + ++++E+G +H
Sbjct: 289 AQSGYGEEALHLFVEMKRDGE-RLNRSTFTSTLSTCAEIAALELGKQVH 336
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 81/150 (54%), Gaps = 15/150 (10%)
Query: 264 GCIEF-----ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
GC+ + AR +F +M +R +VSWN+++ G+A NG+V EA E F+ M + + +S
Sbjct: 39 GCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSIS 94
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+ G L A G IED R F+ +S + C++ Y + RL DA + + M
Sbjct: 95 WNGMLAAYVQNGRIEDARRLFESKADWELIS-----WNCMMGGYVKRNRLVDARGIFDRM 149
Query: 379 PMKPNEVVLGSLLAACRTKGDIILAERLMK 408
P + +EV ++++ G+++ A+RL +
Sbjct: 150 PER-DEVSWNTMISGYAQNGELLEAQRLFE 178
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 286/522 (54%), Gaps = 38/522 (7%)
Query: 13 PFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHC-RSGRIAEAALEFTRM 71
PF+ + + ++ + + + T NP V +++ R S R ++ L+F M
Sbjct: 37 PFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEM 96
Query: 72 TLHG-TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
+ + P+ +F ++ A+ S + +G +H GLD ++ VGT L+ MY +
Sbjct: 97 RRNSFSPPDSFSFAFIVKAAANLRS--VRVGIQLHCQALVHGLD-THLFVGTTLISMYGE 153
Query: 131 FGRMDLATVVFDAMR-------------------------------VKSSFTWNAMIDGY 159
G + A VFD M V++ +WN M+ GY
Sbjct: 154 CGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGY 213
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ G++E A MF EMP++D +SW+ ++ GF GYFEEA FRE+Q G+ P+ ++
Sbjct: 214 TKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLT 273
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR-MHK 278
VL+ACA G L G +H ++ K V V N L+D YS+CG + A+ VF+R M++
Sbjct: 274 GVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNE 333
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R +VSW S++ A++G EA+ F+ M++ G +PD ++F L ACSHAGL+E G Y
Sbjct: 334 RNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEY 393
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
FD MK +Y + P IEHYGC+VDLY RAG+L+ A V MP+ ++ +LL AC G
Sbjct: 394 FDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHG 453
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
D+ LAE++ + L +LDP S++VLL+N YA GKW A +RR+M + I K PG S I
Sbjct: 454 DVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMI 513
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL-CGYVPE 499
E+ ++ F+AG + + +E Y L+ + L++ GYVPE
Sbjct: 514 EVDKIMYTFLAGTKQYKITEEAYKKLKEIIRRLRVEGGYVPE 555
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/478 (37%), Positives = 265/478 (55%), Gaps = 66/478 (13%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ TF L+ GCA + G ++HG+V K G+ ++ V TAL+DMY KFG + A
Sbjct: 123 PDGYTFTALVKGCATRVATGE--GTLLHGMVLKNGVC-FDLYVATALVDMYVKFGVLGSA 179
Query: 138 TVVFDAMRVKSSFTW-------------------------------NAMIDGYMR----- 161
VFD M V+S +W NAMIDGY++
Sbjct: 180 RKVFDEMSVRSKVSWTAVIVGYARCGDMSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVG 239
Query: 162 --------------------------RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
GD+E+A MFD MP ++ +W A++ G+ +
Sbjct: 240 LARELFNEMRERNVVSWTSMVSGYCGNGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRR 299
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
+ALE FREMQ + VEP+ VT++ VL A A++G L +G WIHR+ L++ + ++
Sbjct: 300 SHDALELFREMQTASVEPNEVTVVCVLPAVADLGALDLGRWIHRFALRKKLDRSARIGTA 359
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
LID+Y++CG I A+ F+ M +R SWN++I GFAVNG EALE F M +EGF P+
Sbjct: 360 LIDMYAKCGEITKAKLAFEGMTERETASWNALINGFAVNGCAKEALEVFARMIEEGFGPN 419
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V+ G L+AC+H GL+E+G R+F+ M++ + ++P++EHYGC+VDL RAG L++A N++
Sbjct: 420 EVTMIGVLSACNHCGLVEEGRRWFNAMER-FGIAPQVEHYGCMVDLLGRAGCLDEAENLI 478
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
+ MP N ++L S L AC D++ AER++K +V +D V NYV+L N+YA +W
Sbjct: 479 QTMPYDANGIILSSFLFACGYFNDVLRAERVLKEVVKMDEDVAGNYVMLRNLYATRQRWT 538
Query: 436 GAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493
+++ MK RG K+ S IEIG EF AGD H E I L LS +K+
Sbjct: 539 DVEDVKQMMKKRGTSKEVACSVIEIGGSFIEFAAGDYLHSHLEVIQLTLGQLSKHMKV 596
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 138/335 (41%), Gaps = 72/335 (21%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I +C++ R +A F M PN +T + +L AD + L LG IH
Sbjct: 287 WNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTVVCVLPAVADLGA--LDLGRWIHRF 344
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ LDR + +GTAL+DMYAK G + A + F+ M + + +WNA+I+G+
Sbjct: 345 ALRKKLDR-SARIGTALIDMYAKCGEITKAKLAFEGMTERETASWNALINGFA------- 396
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+NG K EALE F M G P+ VT+I VL+AC +
Sbjct: 397 -------------------VNGCAK-----EALEVFARMIEEGFGPNEVTMIGVLSACNH 432
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G + G + + V+ ++DL R GC++ A + Q M
Sbjct: 433 CGLVEEGRRWFNAMERFGIAPQVEHYGCMVDLLGRAGCLDEAENLIQTM----------- 481
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
+ +G+ + L AC G D LR ++K++ +
Sbjct: 482 -----------------------PYDANGIILSSFLFAC---GYFNDVLRAERVLKEVVK 515
Query: 348 VSPRIE-HYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ + +Y + +LY+ R D +V + M +
Sbjct: 516 MDEDVAGNYVMLRNLYATRQRWTDVEDVKQMMKKR 550
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 40/303 (13%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM--QISGVEPDYVTIISVL 222
I A R F+ RD +++ F + FR++ Q PD T +++
Sbjct: 73 INHARRFFNATHTRDTFLCNSMIAAHFAARQFSQPFTLFRDLRRQAPPFTPDGYTFTALV 132
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
CA G G +H VLK ++ V L+D+Y + G + AR+VF M R+ V
Sbjct: 133 KGCATRVATGEGTLLHGMVLKNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKV 192
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQK----------EGFKPDG---------------- 316
SW ++IVG+A G + EA F+ M+ +G+ G
Sbjct: 193 SWTAVIVGYARCGDMSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVGLARELFNEMRERN 252
Query: 317 -VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
VS+T ++ G +E+ FD+M + + + ++ Y + R DAL +
Sbjct: 253 VVSWTSMVSGYCGNGDVENAKLMFDLMPE-----KNVFTWNAMIGGYCQNRRSHDALELF 307
Query: 376 ENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLV--DLDPGVDSNYVLLANMYAA 430
M ++PNEV + +L A G + L + ++ + LD L+ +MYA
Sbjct: 308 REMQTASVEPNEVTVVCVLPAVADLGALDLGRWIHRFALRKKLDRSARIGTALI-DMYAK 366
Query: 431 VGK 433
G+
Sbjct: 367 CGE 369
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/365 (42%), Positives = 233/365 (63%)
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
+A +F + ++ AMI GY R G +E A +FD+M +D + W+A+++G+ +
Sbjct: 1 MAQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDK 60
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
+EAL F EMQ+ G++PD VTI+SV++ACA +G L WIH YV K + V N
Sbjct: 61 PQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNA 120
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
LID+Y++CG + AR VF++M R ++SW S+I FA++G AL++F M+ E KP+
Sbjct: 121 LIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPN 180
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
GV+F G L ACSHAGL+E+G R F M + ++P+ EHYGC+VDL+ RA L DAL +V
Sbjct: 181 GVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELV 240
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
E MP+ PN V+ GSL+AAC+ G+ L E K +++L+P D V L+N+YA +W
Sbjct: 241 ETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQ 300
Query: 436 GAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCG 495
G++R MK RGI K+ G S IE+ + ++EF+ D+ H +++ IY L+ + +LKL G
Sbjct: 301 DVGELRNLMKQRGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLVG 360
Query: 496 YVPET 500
Y P T
Sbjct: 361 YTPNT 365
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 186/540 (34%), Positives = 291/540 (53%), Gaps = 46/540 (8%)
Query: 2 NSSATATILPQPFLPHQQNPNQNLT--------TTPQISIQTNNSKSTVNPTV-QWTSSI 52
S A + Q FL + N + ++ + Q+ + NP+V W I
Sbjct: 22 KSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQII 81
Query: 53 SRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKL 111
+ +G + A++ LH G PN T+ +L C+ + + G IH
Sbjct: 82 RAYAWNGPF-DGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLA--IEDGVEIHSHAKMF 138
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAV-- 169
GL+ ++V V TAL+D YAK G + A +F +M + WNAMI G G + AV
Sbjct: 139 GLE-SDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQL 197
Query: 170 ------------------------------RMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
++FD M VR+ +SW+A++ G+V +EA
Sbjct: 198 IMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEA 257
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL 259
L+ FR MQ+SG++PD T++ VL AC+++ L G H Y++ + F + +CN LID+
Sbjct: 258 LDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDM 317
Query: 260 YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
YS+CG I FAR+VF RM + +VSWN++I+G+ ++G EAL F+ + G KPD ++F
Sbjct: 318 YSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITF 377
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
L++CSH+GL+ +G +FD M + + + PR+EH C+VD+ RAG +++A + + NMP
Sbjct: 378 ICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMP 437
Query: 380 MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGK 439
+P+ + +LL+ACR +I L E + K + L P N+VLL+N+Y+A G+WD A
Sbjct: 438 FEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAH 497
Query: 440 IRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
IR T K G++K PG S IEI +H F+ GD+SH++ I LE L ++K GY E
Sbjct: 498 IRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAE 557
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 2/180 (1%)
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+ +L AC +L IH++ LK + V + L LY C + AR++F +
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+++ WN II +A NG A++ ++SM G +P+ ++ L ACS IEDG+
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
K++ + + +VD Y++ G L +A + +M + + V +++A C G
Sbjct: 132 HS-HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLYG 189
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 152/376 (40%), Positives = 239/376 (63%), Gaps = 1/376 (0%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
+LD Y K G ++ A +F M ++ +W+ M+ GY ++GD+E A +FD+MP ++ ++W
Sbjct: 108 ILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTW 167
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
T +++ ++G +EA + F +M+ + VE D ++S+L ACA G+L +G IHRYV K
Sbjct: 168 TIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRK 227
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ-RMHKRTLVSWNSIIVGFAVNGFVGEALE 302
++ + VCN LID++ +CGC+ A VF ++ VSWNSII GFA++G +ALE
Sbjct: 228 RNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALE 287
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M+++GF PD V+ L+AC+H G +++G R+F M++ Y + P+IEHYGC++DL
Sbjct: 288 LFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLL 347
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
R G +++A++++++MP +PNEV+ GSLL+ACR ++ AE + L L P NY
Sbjct: 348 GRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYA 407
Query: 423 LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS 482
+L+N+YA G+W K R MKG G QK G S +E+ HEF GDR H +S+ I
Sbjct: 408 VLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISE 467
Query: 483 MLELLSFDLKLCGYVP 498
M++ LS +K G VP
Sbjct: 468 MVDRLSSHVKHVGCVP 483
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 151/382 (39%), Gaps = 113/382 (29%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD------------- 92
V W++ +S +C+ G + A + F +M + N +T+ ++S CA
Sbjct: 134 VSWSTMVSGYCKKGDLEMARVIFDKM----PSKNLVTWTIMVSACAQKGLVDEAGKLFAQ 189
Query: 93 --------------------FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFG 132
S L LG IH V K L R + V AL+DM+ K G
Sbjct: 190 MKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGR-STHVCNALIDMFCKCG 248
Query: 133 RMDLATVVFDAMRV-KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
++ A VFD V K S +WN++I G F
Sbjct: 249 CVNRADYVFDTETVQKDSVSWNSIIGG-------------------------------FA 277
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK--DN 249
G+ ++ALE F +M+ G PD VT+I+VL+AC ++G + G H +++D+
Sbjct: 278 MHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGR-RHFSNMERDYGIMPQ 336
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
++ +IDL R G I+ EA++ SM
Sbjct: 337 IEHYGCMIDLLGRGGLIK-------------------------------EAVDLIKSMP- 364
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDI-MKKIYRVSP-RIEHYGCIVDLYSRAGR 367
++P+ V + L+AC + + Y +I + ++ ++ P +Y + ++Y+ AG+
Sbjct: 365 --WEPNEVIWGSLLSACR----LHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQ 418
Query: 368 LEDALNVVENMPMKPNEVVLGS 389
D M ++ GS
Sbjct: 419 WSDMAKARMQMKGTGSQKTAGS 440
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I ++ NG +A + F+ M + D VS+ A+ A G + + FD M +
Sbjct: 44 NALIDAYSKNGGFSDARKVFDEMPER----DVVSWNTAMAAMVREGELAGVRKLFDEMPE 99
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
VS + I+D Y++AG +E A + + MP + N V ++++ KGD+ +A
Sbjct: 100 KDTVS-----WNTILDGYTKAGEVEAAFELFQRMPER-NVVSWSTMVSGYCKKGDLEMA- 152
Query: 405 RLMKYLVDLDPGVD-SNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
+ + D P + + ++ + A G D AGK+ MK ++
Sbjct: 153 ---RVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVE 196
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 153/385 (39%), Positives = 244/385 (63%)
Query: 116 NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM 175
+V + +L Y + A VFD M ++ +WN MI GY RG++ A +FD
Sbjct: 21 RDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGT 80
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
RDA SW+++++ + K +EALE +REM + + PD +T++SV++AC+++G L +G
Sbjct: 81 EDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGA 140
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
+HR+V + ++K+ LID+Y++CG IE A++VF RM ++ + +W+S+I+G A +G
Sbjct: 141 EVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHG 200
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
E+L F+ M EG KP+GV+F G L AC+H GL+ +G +YF M +++ + P +EHY
Sbjct: 201 LGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHY 260
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
GC+VDL R+G +E+A ++ +M +P+ ++ +LL ACR ++ +AE M L LDP
Sbjct: 261 GCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDP 320
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
D +YVLL+N+YA W+G ++R+T++ IQ+ PG SSIE IHEF++GDR H
Sbjct: 321 LGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHP 380
Query: 476 ESEHIYSMLELLSFDLKLCGYVPET 500
S+ IY +LE + LK GY P T
Sbjct: 381 RSKEIYRVLEEMMDRLKQAGYKPMT 405
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/457 (36%), Positives = 271/457 (59%), Gaps = 36/457 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S IS + R G +A F M G P+ +T +++L C D L LG+ I
Sbjct: 193 VSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGD--LGLGSWIE 250
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V + +D N+ VG+AL+ MY K GD+
Sbjct: 251 GFVVENEMDLNS-FVGSALIGMYGKC-------------------------------GDL 278
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
SA R+FD M +D ++W A++ G+ + G +EA+ F M+ SGV PD +T++ VL+AC
Sbjct: 279 SSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSAC 338
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++G L G W+ Y ++ ++++ V LID+Y++CG ++ A +VF+ M ++ VSWN
Sbjct: 339 ASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWN 398
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEG--FKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
++I A +G E+L F M KEG +P+ +SF G L+AC HAGL+++G + FD+M
Sbjct: 399 AMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMS 458
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ + P+IEH+ C+VDL +RAG + +A + +E MP KP+EVVLG+LL AC+ + ++ ++
Sbjct: 459 SSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVS 518
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
ER+M L++++P NY++ + ++A + +WD + ++R M+ RG+ K PG S IEI +
Sbjct: 519 ERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSWIEIENQ 578
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+HEF AGD H S+ + ++ LL+ ++K+ GY P+
Sbjct: 579 VHEFHAGDVLHFISQDMCQVINLLNEEMKVEGYGPKV 615
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 154/246 (62%), Gaps = 2/246 (0%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
+++I Y R G++ A R+FDE+ +D +SW ++++G+ + GY +A+ F EM+ +G E
Sbjct: 165 HSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFE 224
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD +T++S+L AC ++G LG+G WI +V++ + N V + LI +Y +CG + AR+V
Sbjct: 225 PDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRV 284
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F RM K+ +V+WN++I G+A NG EA+ F+ M++ G PD ++ G L+AC+ G +
Sbjct: 285 FDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGAL 344
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
+ G ++ D + I ++D+Y++ G L+DAL V E+MP K NEV ++++
Sbjct: 345 DFG-KWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQK-NEVSWNAMIS 402
Query: 393 ACRTKG 398
A G
Sbjct: 403 ALAFHG 408
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 154/334 (46%), Gaps = 49/334 (14%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR-GYFEEALECFREMQISGV 211
N ++ ++ D +A +F ++P + ++ ++ G F +E + +M+ G+
Sbjct: 63 NFLLHRFIDLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGI 122
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
P+ T V ACAN+ L G H VLK + V ++LI +YSRCG + AR+
Sbjct: 123 RPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARR 182
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG- 330
VF + ++ LVSWNS+I G++ G+ G+A+ F M+ GF+PD ++ L AC G
Sbjct: 183 VFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGD 242
Query: 331 ----------LIEDGL------------------------RYFDIMKKIYRVSPRIEHYG 356
++E+ + R FD M V + +
Sbjct: 243 LGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRM-----VKKDVVTWN 297
Query: 357 CIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
++ Y++ G ++A+ + M + P+++ L +L+AC + G + + L Y
Sbjct: 298 AMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYAS-- 355
Query: 414 DPGVDSN-YV--LLANMYAAVGKWDGAGKIRRTM 444
+ G+ ++ YV L +MYA G D A ++ M
Sbjct: 356 ERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDM 389
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/470 (38%), Positives = 271/470 (57%), Gaps = 15/470 (3%)
Query: 43 NPTVQ---WTSSISRHCR-----SGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFP 94
+PT++ W + I H + +G F RM HG P+ TF LL A P
Sbjct: 19 HPTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFAS-P 77
Query: 95 SQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNA 154
S L LG +H + + GL + V T+L+ MY+ G + A VFD + +WN+
Sbjct: 78 S-LLHLGRSVHAQILRFGLAIDP-FVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNS 135
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV--- 211
+I+ + G ++ A +F MP R+ ISW+ ++NG+V+ G ++EAL FREMQ+ GV
Sbjct: 136 IINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDV 195
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
P+ T+ VL AC +G L G W H Y+ K +V + LID+Y++CG +E A
Sbjct: 196 RPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATW 255
Query: 272 VFQRM-HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
VF + + +++W+++I G A++G E + F+ M +G +P+ V+F AC H G
Sbjct: 256 VFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGG 315
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
L+ +G Y M + Y + P I+HYGC+VDLY RAGR+++A NVV++MPM+P+ +V G+L
Sbjct: 316 LVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGAL 375
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
L+ R GDI E +K L++L+P YVLL+N+YA G+W+ +R M+ GI+
Sbjct: 376 LSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIK 435
Query: 451 KKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
K PG S IE+G +HEF GD SH E+ I+ MLE + LK+ GYV T
Sbjct: 436 KVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNT 485
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/479 (38%), Positives = 277/479 (57%), Gaps = 21/479 (4%)
Query: 27 TTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALE-----FTRMTLHGTNPNHI 81
T P + + N +S V W + I RS R+ A + RM LH P+
Sbjct: 11 THPSLHLSHPNIESFV-----WNNLIRASTRS-RVQNPAFPPALSLYLRMRLHAVLPDLH 64
Query: 82 TFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVF 141
TF LL + P + G +H + LGL N+ V T+L++MY+ G A F
Sbjct: 65 TFPFLLQS-INTPHR----GRQLHAQILLLGL-ANDPFVQTSLINMYSSCGTPTFARQAF 118
Query: 142 DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALE 201
D + +WNA+I + G I A ++FD+MP ++ ISW+ +++G+V G ++ AL
Sbjct: 119 DEITQPDLPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALS 178
Query: 202 CFREMQI---SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
FR +Q S + P+ T+ SVL+ACA +G L G W+H Y+ K K +V + +LID
Sbjct: 179 LFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLID 238
Query: 259 LYSRCGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
+Y++CG IE A+ +F + ++ +++W+++I F+++G E LE F M +G +P+ V
Sbjct: 239 MYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAV 298
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
+F L AC H GL+ +G YF M Y VSP I+HYGC+VDLYSRAGR+EDA NVV++
Sbjct: 299 TFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKS 358
Query: 378 MPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGA 437
MPM+P+ ++ G+LL R GD+ E + L++LDP S YVLL+N+YA +G+W
Sbjct: 359 MPMEPDVMIWGALLNGARIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREV 418
Query: 438 GKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGY 496
+R M+ RGI+K PG S +E+ I EF AGD SH E ++Y ML+ + L+ GY
Sbjct: 419 RHLRDLMEVRGIKKLPGCSLVEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHGY 477
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 268/458 (58%), Gaps = 5/458 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + IS + SG + EA F RM L + TF ++LS CA+ + G +H
Sbjct: 260 VVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACAN--AGFFAHGKSVH 317
Query: 106 GLVCKLG---LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
G + +L + + V AL+ +Y+K G + +A +FD M+ K +WN ++ GY+
Sbjct: 318 GQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVES 377
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
++ AV +F+EMP ++ +SW +++G+V G+ E+AL+ F M+ V+P T +
Sbjct: 378 SCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAI 437
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+AC +G+L G +H ++++ F+ + N LI +Y+RCG ++ A +F M V
Sbjct: 438 SACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSV 497
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN++I +G EALE F+ M EG PD +SF LTAC+H+GL+++G +YF+ M
Sbjct: 498 SWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESM 557
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
K+ + + P +HY ++DL RAGR+ +A ++++ MP +P + ++L+ CRT GD+ L
Sbjct: 558 KRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMEL 617
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
L + P D Y+LL+N Y+A G+W A ++R+ M+ RG++K+PG S IE G+
Sbjct: 618 GAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGN 677
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F+ GD H E+ +Y LE++ ++ GYVP+T
Sbjct: 678 KVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDT 715
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 185/397 (46%), Gaps = 47/397 (11%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAM 103
TV + IS + R+ A A F + G+ P+ +F LLS P+ + A
Sbjct: 121 TVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQ 180
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL---ATVVFDAMRVKSSFTWNAMIDGYM 160
+ V K G + V AL+ +Y K ++ A V D M K + TW M+ GY+
Sbjct: 181 LQCSVLKSGAG-GVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYV 239
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
RRGD+ +A +F+E+ V+ + W A+++G+V G EA E FR M + V D T S
Sbjct: 240 RRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTS 299
Query: 221 VLNACANVGTLGIGLWIHRYV--LKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
VL+ACAN G G +H + L+ +F + + V N L+ LYS+CG I AR++F M
Sbjct: 300 VLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNM 359
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+ +VSWN+I+ G+ + + +A+E F M + + +S+ ++ H G ED L
Sbjct: 360 KSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYK----NELSWMVMVSGYVHGGFSEDAL 415
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+ F+ M R ED +KP + ++AC
Sbjct: 416 KLFNRM------------------------RAED---------VKPCDYTYAGAISACGE 442
Query: 397 KGDIILAERLMKYLVDLD-PGVDSNYVLLANMYAAVG 432
G + ++L +LV L G +S L MYA G
Sbjct: 443 LGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCG 479
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 193/466 (41%), Gaps = 67/466 (14%)
Query: 11 PQPFLPHQQNPNQNLTTTP-QISIQTNNSKSTVNPTVQWTSSISR--HCRSGRIAEAALE 67
P P P Q +T+ P Q S+ ++ + T +SS R C R+ +AL
Sbjct: 3 PPPARP------QGVTSLPHQCSVLLRRLAASRSLT---SSSFLRALRCLHARLLTSAL- 52
Query: 68 FTRMTLHGTNPNHITF--ITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALL 125
LH H+T I L + D P+ + C + T+L+
Sbjct: 53 -----LHAPPHPHLTLRLIHLYTLSGDLPAA----ATLFRADPCPVA--------ATSLV 95
Query: 126 DMYAKFGRMDLATVVFDAM--RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR----- 178
YA GR+ A FDA+ + + NA+I Y R AV +F +
Sbjct: 96 AAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRP 155
Query: 179 DAISWTALLNGFVKRGYFEE-ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWI 237
D S+TALL+ G+ ++ ++Q S ++ ++SV NA + L
Sbjct: 156 DDYSFTALLSA---AGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEA 212
Query: 238 ---HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
R VL + + T++ Y R G + AR VF+ + + V WN++I G+ +
Sbjct: 213 TRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHS 272
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR--- 351
G V EA E F M E D +FT L+AC++AG G + +I R+ P
Sbjct: 273 GMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGK---SVHGQITRLQPNFVP 329
Query: 352 ---IEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSLLAACRTKGDIILAE 404
+ +V LYS+ G + A + +NM K N ++ G + ++C K + E
Sbjct: 330 EAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEE 389
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
M Y +L +++++ + Y G + A K+ M+ ++
Sbjct: 390 --MPYKNEL------SWMVMVSGYVHGGFSEDALKLFNRMRAEDVK 427
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W + IS + G EA F RM G P+ I+F+T+L+ C G +
Sbjct: 496 SVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHS-------GLVD 548
Query: 105 HGLVCKLGLDRN-NVMVG----TALLDMYAKFGRMDLATVVFDAMRVKSSFT-WNAMIDG 158
G + R+ ++ G T L+D+ + GR+ A + M + + + W A++ G
Sbjct: 549 EGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSG 608
Query: 159 YMRRGDIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
GD+E +A ++F P D ++ L N + G + +A + M+ GV+ +
Sbjct: 609 CRTSGDMELGAHAADQLFKMTPQHDG-TYILLSNTYSAAGRWVDAARVRKLMRDRGVKKE 667
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/450 (39%), Positives = 262/450 (58%), Gaps = 17/450 (3%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGT--NPNHITFITLLSGCADFPSQCLFLGAMIH 105
++SS+ H A +A F R+ ++ + PNH + +L S F ++H
Sbjct: 98 YSSSLPLH------ASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSA--FSTPLVH 149
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAK-FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ K G V+V TALL YA + LA +FD M ++ +W AM+ GY R GD
Sbjct: 150 THLFKSGFHLY-VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGD 208
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLN 223
I +AV +F++MP RD SW A+L + G F EA+ FR M + P+ VT++ VL+
Sbjct: 209 ISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLS 268
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA GTL + IH + ++D +V V N+L+DLY +CG +E A VF+ K++L +
Sbjct: 269 ACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTA 328
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQK---EGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
WNS+I FA++G EA+ F M K KPD ++F G L AC+H GL+ G YFD
Sbjct: 329 WNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFD 388
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+M + + PRIEHYGC++DL RAGR ++AL V+ M MK +E + GSLL AC+ G +
Sbjct: 389 LMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHL 448
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
LAE +K LV L+P ++AN+Y +G W+ A + R+ +K + K PG S IEI
Sbjct: 449 DLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEI 508
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLE-LLSF 489
+ +H+F + D+SH E+E IY +L+ L+SF
Sbjct: 509 DNEVHQFYSLDKSHPETEEIYMILDSLISF 538
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 118/288 (40%), Gaps = 73/288 (25%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRM---------------TLHG--------------- 75
V WT+ +S + RSG I+ A F M T +G
Sbjct: 194 VSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINE 253
Query: 76 --TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR 133
PN +T + +LS CA + L L IH + L ++V V +L+D+Y K G
Sbjct: 254 PSIRPNEVTVVCVLSACAQ--TGTLQLAKGIHAFAYRRDLS-SDVFVSNSLVDLYGKCGN 310
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR 193
++ A+ VF KS WN+MI+ + G E A+ +F+EM
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEM------------------ 352
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG-----LWIHRYVLKQDFKD 248
++ I+ ++PD++T I +LNAC + G + G L +R+ +
Sbjct: 353 ----------MKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRF----GIEP 398
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSWNSIIVGFAVNG 295
++ LIDL R G + A +V M K W S++ ++G
Sbjct: 399 RIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHG 446
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/458 (35%), Positives = 267/458 (58%), Gaps = 5/458 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + IS + +SG A+A F RM + TF ++LS CA+ + G +H
Sbjct: 264 VVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACAN--AGFFVHGKSVH 321
Query: 106 GLVCKLG---LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
G + +L + + V AL+ +Y+K G++ +A +FD M +K +WN ++ GY+
Sbjct: 322 GQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDS 381
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G ++ AV +F MP ++ +SW +++G+V G E+AL+ F +M+ V+P T +
Sbjct: 382 GCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAI 441
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC +G L G +H ++++ F+ + N L+ +Y++CG + AR VF M V
Sbjct: 442 AACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSV 501
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN++I +G EALE F+ M EG PD +SF LTAC+HAGL+++G YF+ M
Sbjct: 502 SWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESM 561
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
K+ + +SP +HY ++DL R+GR+ +A ++++ MP +P + ++L+ CRT GD+
Sbjct: 562 KRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEF 621
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
L + P D Y+LL+N Y+A G+W A ++R+ M+ RG++K+PG S IE+GS
Sbjct: 622 GAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGS 681
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IH F+ GD H E++ +Y LE++ ++ GYVP+T
Sbjct: 682 KIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDT 719
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 13/307 (4%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAM 103
TV + +S R+ A A F + G+ P+ +F L+S +
Sbjct: 125 TVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQ 184
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL---ATVVFDAMRVKSSFTWNAMIDGYM 160
+H V K G + V AL+ +Y K + A V D M K TW M+ GY+
Sbjct: 185 LHCSVLKSGA-AAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYV 243
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
RRGD+ +A +F+E+ + + W A+++G+V+ G +A E FR M V D T S
Sbjct: 244 RRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTS 303
Query: 221 VLNACANVGTLGIGLWIHRYV--LKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
VL+ACAN G G +H + L+ +F + + V N L+ LYS+ G I A+++F M
Sbjct: 304 VLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM 363
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+ + +VSWN+I+ G+ +G + +A+E F M +K D +S+ ++ H GL ED L
Sbjct: 364 NLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP---YKND-LSWMVMVSGYVHGGLSEDAL 419
Query: 337 RYFDIMK 343
+ F+ M+
Sbjct: 420 KLFNQMR 426
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC--ADFPSQCL-FLG 101
+V W + IS + G EA F +M G +P+ I+F+T+L+ C A + +
Sbjct: 500 SVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFE 559
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT-WNAMIDGYM 160
+M G D L+D+ + GR+ A + M + + + W A++ G
Sbjct: 560 SMKRDFGISPGEDHY-----ARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCR 614
Query: 161 RRGDIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
GD+E +A ++F +P D ++ L N + G + +A + M+ GV+ +
Sbjct: 615 TNGDMEFGAYAADQLFRMIPQHDG-TYILLSNTYSAAGRWVDAARVRKLMRDRGVKKE 671
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/349 (44%), Positives = 225/349 (64%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F N ++ Y G ESA ++F+ M R+ ++W +++NG+ G EAL FREM +
Sbjct: 31 FVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLR 90
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
GVEPD T++S+L+ACA +G L +G H Y++K N+ N L+DLY++CG I A
Sbjct: 91 GVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQA 150
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
+VF M ++++VSW S+IVG AVNGF EALE F ++++G P ++F G L ACSH
Sbjct: 151 HKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHC 210
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
G++++G YF MK+ Y + P+IEHYGC+VDL RAG ++ A ++NMPM+PN VV +
Sbjct: 211 GMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRT 270
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
LL AC G + L E L+ L+P +YVLL+N+YA+ +W K+RRTM G+
Sbjct: 271 LLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGV 330
Query: 450 QKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+K PG S +E+ + +HEF+ GDRSH ++E IY L ++ LKL GYVP
Sbjct: 331 KKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVP 379
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 119/255 (46%), Gaps = 36/255 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ + +GR EA F M L G P+ T ++LLS CA+ + L LG H
Sbjct: 62 VTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGA--LALGRRAH 119
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K+GLD N+ G ALLD+YAK G + A VFD M KS +W ++I G
Sbjct: 120 VYMVKVGLD-GNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLA----- 173
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+NGF K EALE F+E++ G+ P +T + VL AC
Sbjct: 174 ---------------------VNGFGK-----EALELFKELERKGLMPSEITFVGVLYAC 207
Query: 226 ANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVS 283
++ G + G + R + ++ ++DL R G ++ A + Q M + V
Sbjct: 208 SHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVV 267
Query: 284 WNSIIVGFAVNGFVG 298
W +++ ++G +
Sbjct: 268 WRTLLGACTIHGHLA 282
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV 293
G +H ++ F+ V V NTL+ +Y+ CG E A ++F+ M +R LV+WNS+I G+A+
Sbjct: 14 GEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYAL 73
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE 353
NG EAL F M G +PDG + L+AC+ G + G R M K+ + +
Sbjct: 74 NGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVG-LDGNLH 132
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPMK 381
++DLY++ G + A V + M K
Sbjct: 133 AGNALLDLYAKCGSIRQAHKVFDEMEEK 160
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/458 (35%), Positives = 267/458 (58%), Gaps = 5/458 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + IS + +SG A+A F RM + TF ++LS CA+ + G +H
Sbjct: 266 VVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACAN--AGFFVHGKSVH 323
Query: 106 GLVCKLG---LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
G + +L + + V AL+ +Y+K G++ +A +FD M +K +WN ++ GY+
Sbjct: 324 GQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDS 383
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G ++ AV +F MP ++ +SW +++G+V G E+AL+ F +M+ V+P T +
Sbjct: 384 GCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAI 443
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC +G L G +H ++++ F+ + N L+ +Y++CG + AR VF M V
Sbjct: 444 AACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSV 503
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN++I +G EALE F+ M EG PD +SF LTAC+HAGL+++G YF+ M
Sbjct: 504 SWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESM 563
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
K+ + +SP +HY ++DL R+GR+ +A ++++ MP +P + ++L+ CRT GD+
Sbjct: 564 KRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEF 623
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
L + P D Y+LL+N Y+A G+W A ++R+ M+ RG++K+PG S IE+GS
Sbjct: 624 GAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGS 683
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IH F+ GD H E++ +Y LE++ ++ GYVP+T
Sbjct: 684 KIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDT 721
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 177/381 (46%), Gaps = 48/381 (12%)
Query: 6 TATILPQPFLPHQQNPNQNL-TTTPQISIQTNNSKSTVNP-TVQWTSSISRHCRSGRIAE 63
TA +L P PH +L T +P ++ +S +P V TS ++ H +GR+ +
Sbjct: 53 TADLLHAPSHPHLTLRLIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRD 112
Query: 64 AAL--------------------EFTRMTLHGT--------------NPNHITFITLLSG 89
AA F R +L P+ +F L+S
Sbjct: 113 AAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISA 172
Query: 90 CADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL---ATVVFDAMRV 146
+ +H V K G + V AL+ +Y K + A V D M
Sbjct: 173 VGQMHNLAAPHCTQLHCSVLKSGA-AAVLSVSNALIALYMKCDTPEASWDARKVLDEMPD 231
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
K TW M+ GY+RRGD+ +A +F+E+ + + W A+++G+V+ G +A E FR M
Sbjct: 232 KDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRM 291
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV--LKQDF--KDNVKVCNTLIDLYSR 262
V D T SVL+ACAN G G +H + L+ +F + + V N L+ LYS+
Sbjct: 292 VSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSK 351
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
G I A+++F M+ + +VSWN+I+ G+ +G + +A+E F M +K D +S+
Sbjct: 352 GGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP---YKND-LSWMVM 407
Query: 323 LTACSHAGLIEDGLRYFDIMK 343
++ H GL ED L+ F+ M+
Sbjct: 408 VSGYVHGGLSEDALKLFNQMR 428
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC--ADFPSQCL-FLG 101
+V W + IS + G EA F +M G +P+ I+F+T+L+ C A + +
Sbjct: 502 SVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFE 561
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT-WNAMIDGYM 160
+M G D L+D+ + GR+ A + M + + + W A++ G
Sbjct: 562 SMKRDFGISPGEDHY-----ARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCR 616
Query: 161 RRGDIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
GD+E +A ++F +P D ++ L N + G + +A + M+ GV+ +
Sbjct: 617 TNGDMEFGAYAADQLFRMIPQHDG-TYILLSNTYSAAGRWVDAARVRKLMRDRGVKKE 673
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 250/423 (59%), Gaps = 16/423 (3%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ ++L C + L G +H V KLGL N + L+++Y K G + A
Sbjct: 128 PDSYAVTSVLKACGCHLA--LKEGREVHSQVLKLGLSSNR-SIRIKLIELYGKCGAFEDA 184
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
VFD M + MI+ Y G ++D + WTA+++G V+ G
Sbjct: 185 RRVFDEMPERDVVASTVMINYYFDHG-------------IKDTVCWTAMIDGLVRNGESN 231
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
ALE FR MQ V P+ VTI+ VL+AC+ +G L +G W+ Y+ K + N V LI
Sbjct: 232 RALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALI 291
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
++YSRCG I+ A++VF++M ++ ++++NS+I+GFA++G EA+E F + K+GF P V
Sbjct: 292 NMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSV 351
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
+F G L ACSH GL E G F M K Y + P+IEHYGC+VDL R GRLE+A + +
Sbjct: 352 TFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRM 411
Query: 378 MPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGA 437
M + P+ V+LG+LL+AC+ G++ LAER+ K LV Y+LL+N Y++ GKW A
Sbjct: 412 MKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEA 471
Query: 438 GKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV 497
++R M+ GI+K+PG SSIE+ + IHEF+ GD H + E IY LE L+ L+L GY
Sbjct: 472 AEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGYT 531
Query: 498 PET 500
P T
Sbjct: 532 PAT 534
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 135/293 (46%), Gaps = 36/293 (12%)
Query: 139 VVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE 198
VVF+ +RV S+ I A ++F + +TAL++G V Y+ +
Sbjct: 66 VVFELLRVCSNLN------------SIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTD 113
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
+ + +M S + PD + SVL AC L G +H VLK N + LI+
Sbjct: 114 GIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIE 173
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVS------------------WNSIIVGFAVNGFVGEA 300
LY +CG E AR+VF M +R +V+ W ++I G NG A
Sbjct: 174 LYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRA 233
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCI 358
LE F +MQ+E P+ V+ L+ACS G ++ G M K +R+ + H+ G +
Sbjct: 234 LEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDK-HRIE--LNHFVGGAL 290
Query: 359 VDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
+++YSR G +++A V E M K N + S++ G + A L + L+
Sbjct: 291 INMYSRCGDIDEAQRVFEQMKEK-NVITYNSMIMGFALHGKSVEAVELFRGLI 342
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 36/238 (15%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
+ TV WT+ I R+G A F M PN +T + +LS C++ + L LG
Sbjct: 211 IKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGA--LQLG 268
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ + K ++ N+ VG AL++MY++ G +D A VF+ M+ K+ T+N+MI G+
Sbjct: 269 RWVRSYMDKHRIELNH-FVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFAL 327
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G AV +F G +K+G+ P VT + V
Sbjct: 328 HGKSVEAVELF---------------RGLIKQGF----------------TPSSVTFVGV 356
Query: 222 LNACANVGTLGIGLWI-HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
LNAC++ G +G I H + ++ ++DL R G +E A F RM K
Sbjct: 357 LNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYS-FIRMMK 413
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 103/286 (36%), Gaps = 61/286 (21%)
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
IS+L C + + I+ +++ + V L+ + S I +A ++F
Sbjct: 36 ISLLQNCKHNNQIPP---IYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQN 92
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC------------ 326
+ + ++I G ++ + + + + M PD + T L AC
Sbjct: 93 PNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREV 152
Query: 327 -----------------------SHAGLIEDGLRYFDIM--KKIYRVSPRIEHY------ 355
G ED R FD M + + + I +Y
Sbjct: 153 HSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIK 212
Query: 356 -----GCIVDLYSRAGRLEDALNVVENMPMK---PNEVVLGSLLAACRTKGDIILAERLM 407
++D R G AL V NM + PNEV + +L+AC G + L +
Sbjct: 213 DTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVR 272
Query: 408 KYL----VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
Y+ ++L+ V L NMY+ G D A ++ MK + +
Sbjct: 273 SYMDKHRIELNHFVGG---ALINMYSRCGDIDEAQRVFEQMKEKNV 315
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/350 (44%), Positives = 225/350 (64%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F N ++ Y G ESA ++F+ M R+ ++W +++NG+ G EAL FREM +
Sbjct: 176 FVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLR 235
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
GVEPD T++S+L+ACA +G L +G H Y++K N+ N L+DLY++CG I A
Sbjct: 236 GVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQA 295
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
+VF M ++++VSW S+IVG AVNGF EALE F ++++G P ++F G L ACSH
Sbjct: 296 HKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHC 355
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
G++++G YF MK+ Y + P+IEHYGC+VDL RAG ++ A ++NMPM+PN VV +
Sbjct: 356 GMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRT 415
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
LL AC G + L E L+ L+P +YVLL+N+YA+ +W K+RRTM G+
Sbjct: 416 LLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGV 475
Query: 450 QKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+K PG S +E+ + +HEF+ GDRSH ++E IY L ++ LKL GYVP
Sbjct: 476 KKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPH 525
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 137/299 (45%), Gaps = 37/299 (12%)
Query: 84 ITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF-GRMDLATVVFD 142
I LL CA F IH + G+ N +G L+ F M A +F
Sbjct: 43 IALLLSCASSK----FKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFS 98
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
++ + FTWN MI GY ES + MP ALE
Sbjct: 99 QIQNPNIFTWNTMIRGYA-----ESE----NPMP----------------------ALEL 127
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
+R+M +S +EPD T +L A A + + G +H ++ F+ V V NTL+ +Y+
Sbjct: 128 YRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAA 187
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
CG E A ++F+ M +R LV+WNS+I G+A+NG EAL F M G +PDG +
Sbjct: 188 CGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSL 247
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+AC+ G + G R M K+ + + ++DLY++ G + A V + M K
Sbjct: 248 LSACAELGALALGRRAHVYMVKV-GLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEK 305
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 119/255 (46%), Gaps = 36/255 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ + +GR EA F M L G P+ T ++LLS CA+ + L LG H
Sbjct: 207 VTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGA--LALGRRAH 264
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K+GLD N+ G ALLD+YAK G + A VFD M KS +W ++I G
Sbjct: 265 VYMVKVGLD-GNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLA----- 318
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+NGF K EALE F+E++ G+ P +T + VL AC
Sbjct: 319 ---------------------VNGFGK-----EALELFKELERKGLMPSEITFVGVLYAC 352
Query: 226 ANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVS 283
++ G + G + R + ++ ++DL R G ++ A + Q M + V
Sbjct: 353 SHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVV 412
Query: 284 WNSIIVGFAVNGFVG 298
W +++ ++G +
Sbjct: 413 WRTLLGACTIHGHLA 427
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/439 (38%), Positives = 245/439 (55%), Gaps = 45/439 (10%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H V KLG + VG AL+D Y+K G A VFD M + +WN + +R G
Sbjct: 469 VHSHVVKLG-SVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREG 527
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM----------QISG--- 210
++ A ++FDEMP +D +SW +L+G+ K G E A E F+ M +SG
Sbjct: 528 ELAGARKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCK 587
Query: 211 ------------------------------VEPDYVTIISVLNACANVGTLGIGLWIHRY 240
VE D ++S+L ACA G+L +G IHRY
Sbjct: 588 KGDLEMARVIFDKMPGKNLVTWTIMMKEASVELDVAAVVSILAACAESGSLSLGKRIHRY 647
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ-RMHKRTLVSWNSIIVGFAVNGFVGE 299
V K++ + VCN LID++ +CGC+ A VF ++ VSWNSII GFA++G +
Sbjct: 648 VRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDK 707
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
ALE F M+++GF PD V+ L+AC+H G +++G RYF M++ Y + P+IEHYGC++
Sbjct: 708 ALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHYGCMI 767
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
DL R G +++A++++++MP +PNEV+ GSLL+ACR ++ AE + L L P
Sbjct: 768 DLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAG 827
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEH 479
NY +L+N+YA G+W K R MKG G QK G S +E+ HEF GDR H +S+
Sbjct: 828 NYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQ 887
Query: 480 IYSMLELLSFDLKLCGYVP 498
I M++ LS +K G VP
Sbjct: 888 ISEMVDRLSSHVKHVGCVP 906
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 133/324 (41%), Gaps = 63/324 (19%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR--VKSSFTWNAMIDGYMR 161
+H V K GL N L+ YA + + VFDA+R +F N M+ Y
Sbjct: 371 LHAQVLKQGLHLNP-RAAARLVSAYALLRLLPSSRRVFDAIRDPHADAFLANTMLRAYAL 429
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G A+ F MP RD+ +++ L+ + + +GV P
Sbjct: 430 GGAPRDALAAFSAMPRRDSFTYSFLI----------------KALSAAGVAPVRA----- 468
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
+H +V+K ++ V N LID YS+ G AR+VF M +R +
Sbjct: 469 ---------------VHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDV 513
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSWN+ + G + A + F+ M ++ D VS+ L + AG +E F
Sbjct: 514 VSWNTAMAAMVREGELAGARKLFDEMPEK----DTVSWNTILDGYTKAGEVEAAFELFQR 569
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP----------MKPNEVVLG--- 388
M + VS + +V Y + G LE A + + MP MK V L
Sbjct: 570 MPERNVVS-----WSTMVSGYCKKGDLEMARVIFDKMPGKNLVTWTIMMKEASVELDVAA 624
Query: 389 --SLLAACRTKGDIILAERLMKYL 410
S+LAAC G + L +R+ +Y+
Sbjct: 625 VVSILAACAESGSLSLGKRIHRYV 648
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 154/367 (41%), Gaps = 102/367 (27%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITF----------------ITLLSG 89
V W++ +S +C+ G + A + F +M N +T+ +++L+
Sbjct: 576 VSWSTMVSGYCKKGDLEMARVIFDKM----PGKNLVTWTIMMKEASVELDVAAVVSILAA 631
Query: 90 CADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRV-KS 148
CA+ S L LG IH V K L R + V AL+DM+ K G ++ A VFD V K
Sbjct: 632 CAE--SGSLSLGKRIHRYVRKRNLGR-STHVCNALIDMFCKCGCVNRADYVFDTETVQKD 688
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
S +WN++I G F G+ ++ALE F +M+
Sbjct: 689 SVSWNSIIGG-------------------------------FAMHGHGDKALELFAQMKQ 717
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYV--LKQDFK--DNVKVCNTLIDLYSRCG 264
G PD VT+I+VL+AC ++G + G RY +++D+ ++ +IDL R G
Sbjct: 718 QGFNPDAVTMINVLSACTHMGFVDEG---RRYFSNMERDYGIMPQIEHYGCMIDLLGRGG 774
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
I+ EA++ SM ++P+ V + L+
Sbjct: 775 LIK-------------------------------EAVDLIKSMP---WEPNEVIWGSLLS 800
Query: 325 ACSHAGLIEDGLRYFDI-MKKIYRVSP-RIEHYGCIVDLYSRAGRLEDALNVVENMPMKP 382
AC + + Y +I + ++ ++ P +Y + ++Y+ AG+ D M
Sbjct: 801 ACR----LHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTG 856
Query: 383 NEVVLGS 389
++ GS
Sbjct: 857 SQKTAGS 863
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/394 (40%), Positives = 250/394 (63%), Gaps = 4/394 (1%)
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
++H + G + ++ T L+ YAK G + A VFD M + WNAMI GY RR
Sbjct: 96 LLHSQFFRSGFESDSFCC-TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRR 154
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISV 221
GD+++A+ +FD MP ++ SWT +++GF + G + EAL+ F M+ V+P+++T++SV
Sbjct: 155 GDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSV 214
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRT 280
L ACAN+G L IG + Y + F DN+ VCN I++YS+CG I+ A+++F+ + ++R
Sbjct: 215 LPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN 274
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
L SWNS+I A +G EAL F M +EG KPD V+F G L AC H G++ G F
Sbjct: 275 LCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFK 334
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M++++++SP++EHYGC++DL R G+L++A ++++ MPMKP+ VV G+LL AC G++
Sbjct: 335 SMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNV 394
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS-IE 459
+AE + L L+P N V+++N+YAA KWDG ++R+ MK + K G S +E
Sbjct: 395 EIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVE 454
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493
+G +H+F D+SH S IY +LE + +KL
Sbjct: 455 VGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKL 488
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 114/275 (41%), Gaps = 39/275 (14%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++FD + L+ + E++ + + G+ P + T + A A+
Sbjct: 28 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 87
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ +H + F+ + C TLI Y++ G + AR+VF M KR + WN++
Sbjct: 88 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 147
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+ G + A+E F+SM ++ S+T ++ S G + L+ F M+K
Sbjct: 148 ITGYQRRGDMKAAMELFDSMPRKNV----TSWTTVISGFSQNGNYSEALKMFLCMEK--- 200
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ +KPN + + S+L AC G++ + RL
Sbjct: 201 -----------------------------DKSVKPNHITVVSVLPACANLGELEIGRRLE 231
Query: 408 KYLVDLDPGVDSNYVLLA--NMYAAVGKWDGAGKI 440
Y + + D+ YV A MY+ G D A ++
Sbjct: 232 GYARE-NGFFDNIYVCNATIEMYSKCGMIDVAKRL 265
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/375 (42%), Positives = 242/375 (64%), Gaps = 3/375 (0%)
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
T L+ YAK G + A VFD M + WNAMI GY RRGD+++A+ +FD MP ++
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 182 SWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
SWT +++GF + G + EAL+ F M+ V+P+++T++SVL ACAN+G L IG + Y
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFVGE 299
+ F DN+ VCN I++YS+CG I+ A+++F+ + ++R L SWNS+I A +G E
Sbjct: 241 ARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDE 300
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
AL F M +EG KPD V+F G L AC H G++ G F M++++++SP++EHYGC++
Sbjct: 301 ALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMI 360
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
DL R G+L++A ++++ MPMKP+ VV G+LL AC G++ +AE + L L+P
Sbjct: 361 DLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPG 420
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS-IEIGSGIHEFMAGDRSHIESE 478
N V+++N+YAA KWDG ++R+ MK + K G S +E+G +H+F D+SH S
Sbjct: 421 NCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSY 480
Query: 479 HIYSMLELLSFDLKL 493
IY +LE + +KL
Sbjct: 481 EIYQVLEEIFRRMKL 495
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 114/275 (41%), Gaps = 39/275 (14%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++FD + L+ + E++ + + G+ P + T + A A+
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ +H + F+ + C TLI Y++ G + AR+VF M KR + WN++
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+ G + A+E F+SM ++ S+T ++ S G + L+ F M+K
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNV----TSWTTVISGFSQNGNYSEALKMFLCMEK--- 207
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ +KPN + + S+L AC G++ + RL
Sbjct: 208 -----------------------------DKSVKPNHITVVSVLPACANLGELEIGRRLE 238
Query: 408 KYLVDLDPGVDSNYVLLAN--MYAAVGKWDGAGKI 440
Y + + D+ YV A MY+ G D A ++
Sbjct: 239 GYARE-NGFFDNIYVCNATIEMYSKCGMIDVAKRL 272
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 241/370 (65%), Gaps = 2/370 (0%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID-GYMRRGDIESAVRMFDEM 175
N+++ TA++ +AK G +D A VFD MR + TWN MI Y + G +E A ++FD M
Sbjct: 232 NMVLCTAMISGFAKTGSVDDARSVFDGMRQRDVATWNVMIGVMYAKCGLVEDARKVFDAM 291
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
P R+ + WT++++G+ + G F++A++ FR+MQISGV+ D TI +V+++C +G L +G
Sbjct: 292 PERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISGVKADDATIATVVSSCGQMGALDLGR 351
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
++H Y + V N+LID+YS+CG I+ A ++F+ + KR SW +I+GFAVNG
Sbjct: 352 YVHAYCDVHGLGKGISVKNSLIDMYSKCGDIKKAHEIFRGLVKRDDFSWTVMIMGFAVNG 411
Query: 296 FVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
GEAL+ F M++EG P+ ++F G LT+CSH GL+E G +F M K+Y ++PRIEH
Sbjct: 412 LSGEALDLFAQMEEEGEVMPNEITFLGVLTSCSHGGLVEQGYHHFHRMSKVYGIAPRIEH 471
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
YGC+VDL RA L +A +E MP+ P+ + SLL ACR +G++ LAE + + + +L+
Sbjct: 472 YGCMVDLLGRAKLLAEAEQFIEEMPIAPDVAIWRSLLFACRARGEVGLAEYVAERVEELE 531
Query: 415 PGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSH 474
P VLL+N+YA +W K+R M + K+PG S IE+ HEF++GD +H
Sbjct: 532 PSRCGGNVLLSNVYATTSRWVDVNKVRTGMGRSRVSKRPGCSVIEVNGCAHEFLSGDETH 591
Query: 475 IESEHIYSML 484
+E+E IY++L
Sbjct: 592 LETEAIYNIL 601
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 154/310 (49%), Gaps = 12/310 (3%)
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
G P T ++L A + L G +H V K G + + + T L+D+YA+ GR+
Sbjct: 99 GVRPLTFTVSSVLKAAA--RREMLREGEQVHVHVFKNGF-QTDERIATTLVDLYARCGRL 155
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
D A VFD + VK + +N MI YM G++E A +F+ MP R+ + ++ G+ RG
Sbjct: 156 DDARRVFDRLLVKDAQLYNTMIAAYMEAGEVELAEELFEVMPERNTHTLMEMVGGYSARG 215
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
+ A F EM +GV + V ++++ A G++ R V + +V N
Sbjct: 216 DMDSAKHVF-EMA-NGV-VNMVLCTAMISGFAKTGSVDDA----RSVFDGMRQRDVATWN 268
Query: 255 TLID-LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
+I +Y++CG +E AR+VF M +R +V W S+I G+ G +A++ F MQ G K
Sbjct: 269 VMIGVMYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISGVK 328
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
D + +++C G ++ G RY ++ + I ++D+YS+ G ++ A
Sbjct: 329 ADDATIATVVSSCGQMGALDLG-RYVHAYCDVHGLGKGISVKNSLIDMYSKCGDIKKAHE 387
Query: 374 VVENMPMKPN 383
+ + + +
Sbjct: 388 IFRGLVKRDD 397
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 93/216 (43%), Gaps = 36/216 (16%)
Query: 254 NTLIDLYSRCGCIEFARQVFQRM----HKRTLVSWNSIIVGFAVNGFVG----------- 298
N L+ L +RC Q+ R H R+ ++ FA G +
Sbjct: 15 NRLVGLAARCASARQLEQLHARAVLLGHARSSFVAAKLVRAFADLGHLRAARAVAAVRAH 74
Query: 299 ----------EALEYFNSMQK--EGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKKI 345
+A+ + M + G +P + + L A + ++ +G + + + K
Sbjct: 75 SQSGSSAAARDAVALYAQMHRGCPGVRPLTFTVSSVLKAAARREMLREGEQVHVHVFKNG 134
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
++ RI +VDLY+R GRL+DA V + + +K + + +++AA G++ LAE
Sbjct: 135 FQTDERIA--TTLVDLYARCGRLDDARRVFDRLLVKDAQ-LYNTMIAAYMEAGEVELAEE 191
Query: 406 LMKYLVDLDPGVDSNYVL-LANMYAAVGKWDGAGKI 440
L + + P +++ ++ + Y+A G D A +
Sbjct: 192 LFEVM----PERNTHTLMEMVGGYSARGDMDSAKHV 223
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/457 (36%), Positives = 273/457 (59%), Gaps = 7/457 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W +S RSG EA + F ++ G P+ +T ++L D S+ L +G +IH
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGD--SEMLNMGRLIH 275
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V K GL ++ ++ +A++DMY K G + +F+ + + NA I G R G +
Sbjct: 276 GYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 166 ESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+ A+ MF+ + + +SWT+++ G + G EALE FREMQ++GV+P++VTI S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L AC N+ LG G H + ++ DNV V + LID+Y++CG I ++ VF M + L
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
V WNS++ GF+++G E + F S+ + KPD +SFT L+AC GL ++G +YF +
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M + Y + PR+EHY C+V+L RAG+L++A ++++ MP +P+ V G+LL +CR + ++
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LAE + L L+P YVLL+N+YAA G W IR M+ G++K PG S I++
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+ ++ +AGD+SH + + I ++ +S +++ G+ P
Sbjct: 635 NRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRP 671
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 186/393 (47%), Gaps = 45/393 (11%)
Query: 39 KSTVNPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
+S +PT+ ++S I ++ ++ F+RM HG P+ L CA+ +
Sbjct: 74 QSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA-- 131
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
+G IH + C GLD + + G+ + MY + GRM A VFD M K T +A++
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGS-MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLC 190
Query: 158 GYMRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEP 213
Y R+G +E VR+ EM + +SW +L+GF + GY +EA+ F+++ G P
Sbjct: 191 AYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP 250
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLY------------- 260
D VT+ SVL + + L +G IH YV+KQ + V + +ID+Y
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 261 ------------------SRCGCIEFARQVFQRMHKRTL----VSWNSIIVGFAVNGFVG 298
SR G ++ A ++F+ ++T+ VSW SII G A NG
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 299 EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCI 358
EALE F MQ G KP+ V+ L AC + + G +++ + + +
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSAL 429
Query: 359 VDLYSRAGRLEDALNVVENMPMKPNEVVLGSLL 391
+D+Y++ GR+ + V MP K N V SL+
Sbjct: 430 IDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLM 461
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 135/362 (37%), Gaps = 80/362 (22%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+I Y A + +P S+++L+ K F +++ F M G+ PD
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 215 YVTIISVLNACANVGTLGIGLWIH-------------------------------RYVLK 243
+ ++ CA + +G IH R V
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH----KRTLVSWNSIIVGFAVNGFVGE 299
+ +V C+ L+ Y+R GC+E ++ M + +VSWN I+ GF +G+ E
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLRYFDIMKKIYRV 348
A+ F + GF PD V+ + L + H +I+ GL +K +
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGL-----LKDKCVI 290
Query: 349 SPRIEHYG------CIVDLY------------------SRAGRLEDALNVVE---NMPMK 381
S I+ YG I+ L+ SR G ++ AL + E M+
Sbjct: 291 SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
N V S++A C G I A L + + GV N+V + +M A G G R
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQ--VAGVKPNHVTIPSMLPACGNIAALGHGR 408
Query: 442 RT 443
T
Sbjct: 409 ST 410
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 18/192 (9%)
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
H +LK +++ + LI YS C A V Q + T+ S++S+I
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 298 GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP----RIE 353
+++ F+ M G PD C+ L F + K+I+ VS ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAE-------LSAFKVGKQIHCVSCVSGLDMD 150
Query: 354 HY--GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
+ G + +Y R GR+ DA V + M K + V +LL A KG + E +++ L
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDK-DVVTCSALLCAYARKGCL---EEVVRILS 206
Query: 412 DLD-PGVDSNYV 422
+++ G+++N V
Sbjct: 207 EMESSGIEANIV 218
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 184/524 (35%), Positives = 280/524 (53%), Gaps = 71/524 (13%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W S I+ H + G A F M P++ITF ++LSGC + + L LG IH
Sbjct: 498 ISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKN--PEALELGKQIH 555
Query: 106 GLVCKLGLD----------------------RN--------NVMVGTALLDMYAKFGRMD 135
G + + GL RN +VM TA++ A G
Sbjct: 556 GRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDM 615
Query: 136 LATVVFDAMR------VKSSFT---------------------------------WNAMI 156
A +F M+ VKS+F+ NA+I
Sbjct: 616 KAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALI 675
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
Y + G + A +FD+MP RD +SW ++ G+ + G + A+E +MQ V P+
Sbjct: 676 SAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKF 735
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+ +S+LNAC++ L G +H ++K+ + +V+V LI +Y++CG A++VF +
Sbjct: 736 SFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNI 795
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
++ +V+WN++I +A +G +AL +FN M+KEG KPDG +FT L+AC+HAGL+ +G
Sbjct: 796 IEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGY 855
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+ F M+ Y V P IEHYGC+V L RA R ++A ++ MP P+ V +LL ACR
Sbjct: 856 QIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRI 915
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
G+I LAE + L+ + Y+LL+N+YAA G+WD KIRR M+GRGI+K+PG S
Sbjct: 916 HGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRS 975
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IE+ + IHEF+A DRSH E+ IY+ L+ LS +++ GY P+T
Sbjct: 976 WIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDT 1019
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 179/370 (48%), Gaps = 54/370 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + I+ + G EA ++ RM G N T++++L+ C+ S+ L G +IH
Sbjct: 296 VVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACS--TSKALEAGKLIH 353
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + G ++V +G AL+ MYA R GD+
Sbjct: 354 SHISEDG-HSSDVQIGNALISMYA-------------------------------RCGDL 381
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +F MP RD ISW A++ G+ +R EA+ +++MQ GV+P VT + +L+AC
Sbjct: 382 PKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN G IH +L+ K N + N L+++Y RCG + A+ VF+ R ++SWN
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWN 501
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S+I G A +G A + F MQ E +PD ++F L+ C + +E G K+I
Sbjct: 502 SMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELG-------KQI 554
Query: 346 YRVSPRIEHYG---------CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+ RI G ++++Y R G L+DA NV ++ + + + +++ C
Sbjct: 555 H---GRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGCAD 610
Query: 397 KGDIILAERL 406
+G+ + A L
Sbjct: 611 QGEDMKAIEL 620
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 168/348 (48%), Gaps = 41/348 (11%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W + I+ + R EA + +M G P +TF+ LLS CA+ S G MIH
Sbjct: 397 ISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACAN--SSAYADGKMIH 454
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + G+ N + NA+++ Y R G +
Sbjct: 455 EDILRSGIKSNGHLA--------------------------------NALMNMYRRCGSL 482
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +F+ RD ISW +++ G + G +E A + F+EMQ +EPD +T SVL+ C
Sbjct: 483 MEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGC 542
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
N L +G IH + + + +V + N LI++Y RCG ++ AR VF + R ++SW
Sbjct: 543 KNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWT 602
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKK 344
++I G A G +A+E F MQ EGF+P +F+ L C+ + +++G + I+
Sbjct: 603 AMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNS 662
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLG 388
Y + + + ++ YS++G + DA V + MP + N+++ G
Sbjct: 663 GYELDTGVGN--ALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAG 708
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 201/440 (45%), Gaps = 72/440 (16%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + + + + + E F +M+ G +P+ +T+I LL PS L G IH
Sbjct: 195 VSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTT-PSM-LDEGKRIH 252
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L + GL+ +++ VGTAL+ M +R GD+
Sbjct: 253 KLTVEEGLN-SDIRVGTALVTMC-------------------------------VRCGDV 280
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+SA + F RD + + AL+ + G+ EA E + M+ GV + T +S+LNAC
Sbjct: 281 DSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNAC 340
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ L G IH ++ + +V++ N LI +Y+RCG + AR++F M KR L+SWN
Sbjct: 341 STSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWN 400
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKK 344
+II G+A GEA+ + MQ EG KP V+F L+AC+++ DG + + DI++
Sbjct: 401 AIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS 460
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE---------------------------- 376
+ + + + ++++Y R G L +A NV E
Sbjct: 461 GIKSNGHLAN--ALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYK 518
Query: 377 ------NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-VLLANMYA 429
N ++P+ + S+L+ C+ + L +++ + + +D N L NMY
Sbjct: 519 LFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYI 578
Query: 430 AVGKWDGAGKIRRTMKGRGI 449
G A + +++ R +
Sbjct: 579 RCGSLQDARNVFHSLQHRDV 598
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 181/362 (50%), Gaps = 17/362 (4%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F N +I+ Y++ + A ++F EMP RD ISW +L++ + ++G+ ++A + F EMQ +
Sbjct: 63 FLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNA 122
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G P+ +T IS+L AC + L G IH ++K ++ + +V N+L+ +Y +CG + A
Sbjct: 123 GFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRA 182
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
RQVF + R +VS+N+++ +A +V E L F M EG PD V++ L A +
Sbjct: 183 RQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTP 242
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
++++G R + + ++ I +V + R G ++ A + + + VV +
Sbjct: 243 SMLDEGKRIHKLTVE-EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADR-DVVVYNA 300
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSN---YVLLANMYAAVGKWDGAGKIRRTMKG 446
L+AA G + E +Y GV N Y+ + N + K AGK+ +
Sbjct: 301 LIAALAQHGHNV--EAFEQYYRMRSDGVALNRTTYLSILNA-CSTSKALEAGKLIHSH-- 355
Query: 447 RGIQKKPGLSSIEIGSGIHEFMA--GDRSHIESEHIYSM--LELLSFDLKLCGYVPETVA 502
I + S ++IG+ + A GD E Y+M +L+S++ + GY
Sbjct: 356 --ISEDGHSSDVQIGNALISMYARCGDLPKAR-ELFYTMPKRDLISWNAIIAGYARREDR 412
Query: 503 GE 504
GE
Sbjct: 413 GE 414
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 166/366 (45%), Gaps = 38/366 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W S IS + + G +A F M G PN IT+I++L+ C P++ L G IH
Sbjct: 94 ISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS-PAE-LENGKKIH 151
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K G R + V +LL MY K G + A VF + + ++N M+ Y ++
Sbjct: 152 SQIIKAGYQR-DPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQK--- 207
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
Y +E L F +M G+ PD VT I++L+A
Sbjct: 208 ----------------------------AYVKECLGLFGQMSSEGISPDKVTYINLLDAF 239
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
L G IH+ +++ +++V L+ + RCG ++ A+Q F+ R +V +N
Sbjct: 240 TTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYN 299
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKK 344
++I A +G EA E + M+ +G + ++ L ACS + +E G L + I +
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED 359
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ S ++ ++ +Y+R G L A + MP K + + +++A + D A
Sbjct: 360 GH--SSDVQIGNALISMYARCGDLPKARELFYTMP-KRDLISWNAIIAGYARREDRGEAM 416
Query: 405 RLMKYL 410
RL K +
Sbjct: 417 RLYKQM 422
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 5/181 (2%)
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
Q E + T +++L C L IH +++ ++ + N LI++Y +C +
Sbjct: 19 QPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSV 78
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
A QVF+ M +R ++SWNS+I +A GF +A + F MQ GF P+ +++ LTAC
Sbjct: 79 LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138
Query: 327 SHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
+E+G + + I+K Y+ PR+++ ++ +Y + G L A V + P +V
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAG--ISPRDV 194
Query: 386 V 386
V
Sbjct: 195 V 195
>gi|90265157|emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 169/446 (37%), Positives = 252/446 (56%), Gaps = 7/446 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL--GAM 103
V T+ H SG+ A+A F M G P+++ L C S G M
Sbjct: 77 VPRTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVAVAVALGACHGAGSWTARRNPGKM 136
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH LV G+ +V V T L+ +Y + G + ++ VFD M +S+ TWNAM+ Y R G
Sbjct: 137 IHALVVTSGI-VPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQYARHG 195
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM---QISGVEPDYVTIIS 220
+++A MF MP RD +SW +L G+ G EAL FR+M V P+ T+ +
Sbjct: 196 KVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMST 255
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKR 279
+L ACA G L G+W+H Y+ + D+ + LID+Y +CG I+ A QVF++ K+
Sbjct: 256 ILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKK 315
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
L SW ++I G A++G +AL F+ MQ G PD V+ G L AC+H GL+++GL YF
Sbjct: 316 DLFSWTTVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYF 375
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M+ +R++P+IEHYGC++DL R GRL++A +++ MPM PN V+ G+ L+AC+ G+
Sbjct: 376 YSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGN 435
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L + + L LDP V+L++MYA W G + RR M ++K PG SSIE
Sbjct: 436 MELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIE 495
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLE 485
+ +HEF+AG H + I S+L+
Sbjct: 496 LKGEVHEFVAGGSQHPQYAEICSVLQ 521
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 132/351 (37%), Gaps = 78/351 (22%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH L+ K GL + TALL YA G D
Sbjct: 31 IHCLLLKAGLLHVGAHLPTALLSAYAALGSPD---------------------------- 62
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
A R+FDEMP + + TA+ V G +A+ F +M GV PD V + L
Sbjct: 63 ---HARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVAVAVALG 119
Query: 224 ACANVGTLGI----GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ----- 274
AC G+ G IH V+ +V V LI +Y G + +R+VF
Sbjct: 120 ACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSR 179
Query: 275 --------------------------RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
M +R +VSWN+++ G+ V G EAL F M
Sbjct: 180 STITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMV 239
Query: 309 KE---GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG----CIVDL 361
P+ + + L AC+ AG +E G I Y R+ G C++D+
Sbjct: 240 SPSSCAVHPNVPTMSTILGACAGAGCLETG-----IWVHAYIERNRMNDDGYLDRCLIDM 294
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD 412
Y + G +++AL V E P K + +++ G A R+ + D
Sbjct: 295 YCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQD 345
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 160/425 (37%), Positives = 256/425 (60%), Gaps = 11/425 (2%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W S I + + R E F M + +T + ++S C LG
Sbjct: 473 VKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTH-------LG 525
Query: 102 AMIHGLVCKLGLDRNNVMV----GTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
++RN++ V G L+D Y + G++ A VF M+ K++ T NAMI
Sbjct: 526 DWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIH 585
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
Y + G++ SA ++FD++P +D ISW++++ + + +F ++LE FR+MQ + V+PD V
Sbjct: 586 AYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVV 645
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I SVL+ACA++G L +G WIH YV + + K + + N+LID++++CGC++ A QVF M
Sbjct: 646 IASVLSACAHLGALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEME 705
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
++ +SWNSII+G A NGF EAL F SM EG +P+ V+F G L AC++ L+++GL
Sbjct: 706 EKDTLSWNSIILGLANNGFEDEALNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLD 765
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
+F+ MK ++ + P+++HYGC+V + SRAG+LE A N + MP+ P+ VV LL AC+T
Sbjct: 766 HFERMKTVHNLEPQMKHYGCVVGILSRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTH 825
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G++ +AE K L +LDP +Y+LL+N+YA+ +W A +R+ M ++K P S
Sbjct: 826 GNVAVAEVATKKLSELDPSNSGDYMLLSNIYASADRWSDALNVRQWMADTAVRKSPACSV 885
Query: 458 IEIGS 462
++ S
Sbjct: 886 VDSAS 890
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 198/316 (62%), Gaps = 1/316 (0%)
Query: 144 MRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF 203
M +K+ +WN +I G+ G+IE A +FD+MP R+ +SWT L++G+ + + EA+ F
Sbjct: 1 MPMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALF 60
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
R M G+ P +T+++V+ A +N+G + +G +H Y +K+ + +V N+LIDLY++
Sbjct: 61 RHMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKI 120
Query: 264 GCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
G ++ + +VF M +R LVSW SII GFA++G EALE F M++ G +P+ ++F
Sbjct: 121 GSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSV 180
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP 382
+ ACSH GL+E GL +F M Y + P I+H+GCI+D+ RAGRL +A ++E +P++
Sbjct: 181 INACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEV 240
Query: 383 NEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRR 442
N +V LL C G++ + +R +K + DL+ ++ +L+N+ +G++ A + R+
Sbjct: 241 NVIVWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARK 300
Query: 443 TMKGRGIQKKPGLSSI 458
+ R I K PGL+ +
Sbjct: 301 LLDERKIVKVPGLALV 316
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 167/381 (43%), Gaps = 74/381 (19%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD--FPSQCLFLGA 102
T W + + +S +A + + + G P+++TF +L CA P + G
Sbjct: 375 TFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKE----GE 430
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H V KLG ++ V +L+ +YA G + A +FD M VK +WN++I GY
Sbjct: 431 QMHSHVIKLGF-LLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGY--- 486
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
+R F+E L F MQ V+ D VT++ V+
Sbjct: 487 ----------------------------SQRNRFKEVLALFELMQAEEVQADKVTMVKVI 518
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT-- 280
+AC ++G + + RY+ + + +V + NTLID Y R G ++ A +VF +M +
Sbjct: 519 SACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTV 578
Query: 281 -----------------------------LVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
L+SW+S+I ++ ++LE F MQ+
Sbjct: 579 TLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAK 638
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
KPD V L+AC+H G ++ G D +++ + I ++D++++ G +++A
Sbjct: 639 VKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKTDTIME-NSLIDMFAKCGCMQEA 697
Query: 372 LNVVENMPMKP----NEVVLG 388
L V M K N ++LG
Sbjct: 698 LQVFTEMEEKDTLSWNSIILG 718
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 180/367 (49%), Gaps = 30/367 (8%)
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+++ D+ A ++F+++ W LL G + ++A+ +++ Q G++PD +T
Sbjct: 355 LQQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFP 414
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
VL ACA G +H +V+K F ++ V N+LI LY+ CG + AR +F M +
Sbjct: 415 FVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVK 474
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+VSWNS+I G++ E L F MQ E + D V+ ++AC+H G D
Sbjct: 475 DVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLG---DWSMAD 531
Query: 340 DIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
+++ I R ++ Y ++D Y R G+L+ A V M K N V L +++ A
Sbjct: 532 CMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDK-NTVTLNAMIHAYAKG 590
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK----- 452
G+++ A+++ + + D S+ + Y+ + + ++ R M+ ++
Sbjct: 591 GNLVSAKKIFDQIPNKDLISWSSMIC---AYSQASHFSDSLELFRQMQRAKVKPDAVVIA 647
Query: 453 ------PGLSSIEIGSGIHEFMAGDRSHIESEHIY--SMLELLSFDLKLCGYVPET--VA 502
L ++++G IH+++ R++I+++ I S++++ + CG + E V
Sbjct: 648 SVLSACAHLGALDLGKWIHDYV--RRNNIKTDTIMENSLIDMFA----KCGCMQEALQVF 701
Query: 503 GELYEND 509
E+ E D
Sbjct: 702 TEMEEKD 708
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT I + R+ AEA F M G +P+ IT + ++ ++ + +G M+
Sbjct: 37 VVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPSEITVLAVVPAISNLGG--ILMGEML 94
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF-TWNAMIDGYMRRG 163
HG K G+ ++ VG +L+D+YAK G + + VFD M + + +W ++I G
Sbjct: 95 HGYCVKKGI-MSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISG----- 148
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
F G EALE F EM+ +G+ P+ +T +SV+N
Sbjct: 149 --------------------------FAMHGLSVEALELFAEMRRAGIRPNRITFLSVIN 182
Query: 224 ACANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
AC++ G + GL + V + + +K +ID+ R G + A Q+ +
Sbjct: 183 ACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIE 234
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/501 (20%), Positives = 214/501 (42%), Gaps = 72/501 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD--FPSQCLFLGAM 103
V WTS IS G EA F M G PN ITF+++++ C+ Q L A
Sbjct: 140 VSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGGLVEQGL---AF 196
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDGYMRR 162
+V + +D G ++DM + GR+ A + + + V+ + W ++ +
Sbjct: 197 FKSMVYEYNIDPEIKHFG-CIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKY 255
Query: 163 GDIE---SAVRMFDEMPVRDAISWTALLNGFVKRGYF---EEALECFREMQISGVEPDYV 216
G++E A++M ++ + L N + G F E+A + E +I V +
Sbjct: 256 GEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKVPGLAL 315
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS-RCGCIEFARQVFQR 275
+ V L H +++ + + +I Y+ + + FA +VF++
Sbjct: 316 VVTRSFVMMEAVKKL------HAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQ 369
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+ T WN+++ G A + +A+ ++ Q++G KPD ++F L AC+ ++G
Sbjct: 370 IESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEG 429
Query: 336 LRYFDIMKK------IYRVSPRIEHYGCIVDL------------------------YSRA 365
+ + K I+ + I Y DL YS+
Sbjct: 430 EQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQR 489
Query: 366 GRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYL----VDLDPGVD 418
R ++ L + E M ++ ++V + +++AC GD +A+ +++Y+ +++D +
Sbjct: 490 NRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLG 549
Query: 419 SNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESE 478
+ L + Y +G+ A K+ MK + +++ + + IH + G + + ++
Sbjct: 550 NT---LIDYYCRIGQLQSAEKVFSQMKDK--------NTVTLNAMIHAYAKGG-NLVSAK 597
Query: 479 HIYSML---ELLSFDLKLCGY 496
I+ + +L+S+ +C Y
Sbjct: 598 KIFDQIPNKDLISWSSMICAY 618
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/496 (36%), Positives = 275/496 (55%), Gaps = 48/496 (9%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
+ S I + S +A L F RM G +PN T +L C + ++HGL
Sbjct: 182 YNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACG--CKSAYWEAVLVHGL 239
Query: 108 VCKLGLD----------------------------------------------RNNVMVG 121
KLG+ + +++V
Sbjct: 240 AIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIEITGVKIDIIVR 299
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
AL DMYAK G + A +FD + K+ +W +MI Y + G IE A ++FD+MP ++ +
Sbjct: 300 NALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVV 359
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
SW ++++ +++ G + EAL+ F +M+ S V PD T++S+L AC+ +G L +G IH Y+
Sbjct: 360 SWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYI 419
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
L V + N+LID+Y++CG + A +F M + LVSWN II A++G EA+
Sbjct: 420 LSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAI 479
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
+ F MQ +G PD ++ TG L+ACSH+GL++ GL YFD M IYRV IEHY C+VDL
Sbjct: 480 KLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVXREIEHYACMVDL 539
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
R G L +A+ ++ MPMKP+ VV G+LL ACR G++ + ++++K L++L+P Y
Sbjct: 540 LGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLY 599
Query: 422 VLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIY 481
VL++N+Y +W+ KIR+ M RGI+K +SSIEI I+EFM D+ H S IY
Sbjct: 600 VLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIY 659
Query: 482 SMLELLSFDLKLCGYV 497
+ML+ L+ L+ GY+
Sbjct: 660 AMLDQLTDHLRSAGYL 675
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 143/307 (46%), Gaps = 29/307 (9%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD++ A RMFD++P + + +L+ G+ +A+ FR M SG+ P+ T+ VL
Sbjct: 162 GDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVL 221
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC + +H +K V V N LI +Y CG I AR++F + +TLV
Sbjct: 222 KACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLV 281
Query: 283 SWNSI--IVGFAVNGFVGEAL--------------EYFNSMQKEGFKPDGVSFTGALTAC 326
SWNS+ I G ++ V AL F+ Q++ VS+T ++A
Sbjct: 282 SWNSMIEITGVKIDIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNV----VSWTSMISAY 337
Query: 327 SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL---NVVENMPMKPN 383
+ G IE + FD M VS + ++ Y R G+ +AL N + N + P+
Sbjct: 338 AQHGSIEVARQIFDQMPGKNVVS-----WNSMISCYLREGQYREALDLFNKMRNSRVVPD 392
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN-YVLLANMYAAVGKWDGAGKIRR 442
E L S+LAAC GD+++ +++ Y++ Y L +MYA G A I
Sbjct: 393 EATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFL 452
Query: 443 TMKGRGI 449
M G+ +
Sbjct: 453 EMPGKNL 459
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 233/351 (66%), Gaps = 1/351 (0%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
+ N+++ Y GD+ SA ++FD+MP +D ++W +++NGF + G EEAL + EM
Sbjct: 157 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 216
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G++PD TI+S+L+ACA +G L +G +H Y++K N+ N L+DLY+RCG +E A
Sbjct: 217 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTACSH 328
+ +F M + VSW S+IVG AVNGF EA+E F M+ EG P ++F G L ACSH
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
G++++G YF M++ Y++ PRIEH+GC+VDL +RAG+++ A +++MPM+PN V+
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 396
Query: 389 SLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
+LL AC GD LAE ++ L+P +YVLL+NMYA+ +W KIR+ M G
Sbjct: 397 TLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDG 456
Query: 449 IQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
++K PG S +E+G+ +HEF+ GD+SH +S+ IY+ L+ ++ L+ GYVP+
Sbjct: 457 VKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ 507
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 126/238 (52%), Gaps = 4/238 (1%)
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLG 232
E P+ + W L+ G+ + G A +REM++SG VEPD T ++ A + +
Sbjct: 80 EKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
+G IH V++ F + V N+L+ LY+ CG + A +VF +M ++ LV+WNS+I GFA
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
NG EAL + M +G KPDG + L+AC+ G + G R M K+ ++ +
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GLTRNL 257
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
++DLY+R GR+E+A + + M K N V SL+ G A L KY+
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 39/254 (15%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ +G+ EA +T M G P+ T ++LLS CA + L LG +H
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA--LTLGKRVH 245
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K+GL RN + LLD+YA+ GR++ A +FD M K+S +W
Sbjct: 246 VYMIKVGLTRN-LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW------------- 291
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTIISVLNA 224
T+L+ G G+ +EA+E F+ M+ G+ P +T + +L A
Sbjct: 292 ------------------TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRM-HKRTL 281
C++ G + G R +++++K ++ + ++DL +R G ++ A + + M + +
Sbjct: 334 CSHCGMVKEGFEYFRR-MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 392
Query: 282 VSWNSIIVGFAVNG 295
V W +++ V+G
Sbjct: 393 VIWRTLLGACTVHG 406
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 155/383 (40%), Positives = 242/383 (63%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
+V++ L+ Y + G + AT +FD+M K + +WN++I+G+M+ GD+ A +F +MP
Sbjct: 209 SVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMP 268
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
++ +SWT ++NGF + G E+ALE F M G P+ TI+S L+ACA +G L GL
Sbjct: 269 EKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLR 328
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
IH Y+ FK N+ + L+D+Y++CG IE A +VF ++ L+ W+ +I G+A++G
Sbjct: 329 IHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGH 388
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG 356
+AL+YF M+ G KPD V F L ACSH+G + +GL++FD M++ Y + P ++HY
Sbjct: 389 FRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYT 448
Query: 357 CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPG 416
+VD+ RAGRL++AL + MP+ P+ VV G+L ACRT ++ +AE K L+ L+P
Sbjct: 449 LVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPK 508
Query: 417 VDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIE 476
+YV L+N YA+VG+WD A ++R +M+ G K PG S IE+ +H F+AGD +H
Sbjct: 509 HPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNR 568
Query: 477 SEHIYSMLELLSFDLKLCGYVPE 499
+ IYS L+ +S + GY E
Sbjct: 569 AVEIYSKLDEISASAREKGYTKE 591
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 144/338 (42%), Gaps = 77/338 (22%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ ++ ++G +A F M G PN T ++ LS CA + L G I
Sbjct: 272 VVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGA--LDAGLRI 329
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + G + N+++GTAL+DMYAK G ++ A VF + K W+ MI G+ G
Sbjct: 330 HNYLSGNGF-KLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHG- 387
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+F +AL+ F M+ +G +PD V ++VLNA
Sbjct: 388 ------------------------------HFRKALQYFEWMKFTGTKPDSVVFLAVLNA 417
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C++ G + GL F DN++ R IE M TLV
Sbjct: 418 CSHSGQVNEGL---------KFFDNMR----------RGYLIE------PSMKHYTLV-- 450
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC-SHAGLIEDGLRYFDIMK 343
++G A G + EAL++ +M PD V + AC +H + L K
Sbjct: 451 -VDMLGRA--GRLDEALKFIRAMP---ITPDFVVWGALFCACRTHKNVEMAEL----ASK 500
Query: 344 KIYRVSPRIEHYGCIVDL---YSRAGRLEDALNVVENM 378
K+ ++ P+ H G V L Y+ GR +DA V +M
Sbjct: 501 KLLQLEPK--HPGSYVFLSNAYASVGRWDDAERVRVSM 536
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 153/407 (37%), Gaps = 108/407 (26%)
Query: 140 VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
VF + RV + F I ++ A+ +F ++++ + AL+ G + FE +
Sbjct: 70 VFSSSRVVTQF-----ISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESS 124
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK--QDFKDNVKVC---- 253
+ F M + PD +T VL + A + G+G +H +LK +F V+V
Sbjct: 125 ISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDM 184
Query: 254 -----------------------------NTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
N LI Y R G + A ++F M K+ SW
Sbjct: 185 YVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSW 244
Query: 285 NSIIVGF--------------------------AVNGFVG-----EALEYFNSMQKEGFK 313
NS+I GF VNGF +ALE F M +EG +
Sbjct: 245 NSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGAR 304
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMK---------------KIYRVSPRIEH---- 354
P+ + AL+AC+ G ++ GLR + + +Y IEH
Sbjct: 305 PNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKV 364
Query: 355 -----------YGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTKGDI 400
+ ++ ++ G AL E M KP+ VV ++L AC G +
Sbjct: 365 FHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQV 424
Query: 401 ILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
+ M+ ++P + +Y L+ +M G+ D A K R M
Sbjct: 425 NEGLKFFDNMRRGYLIEPSM-KHYTLVVDMLGRAGRLDEALKFIRAM 470
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 163/418 (38%), Positives = 254/418 (60%), Gaps = 9/418 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I + + R E F M + +T + ++ C+ L ++
Sbjct: 224 VSWNSLICGYSQCNRFKEVLDLFNLMREANVTADSVTMVKVILACS-----YLCEDGVVD 278
Query: 106 GLVCKLGLDRN---NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+V K D++ +V +G +L+DMY + G +DLA VFD M+ K+ +WNAM+ GY
Sbjct: 279 SMV-KYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATA 337
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD+ +A ++F+EMP+R+ ISWT +++G + +AL+ F+EM + V+PD +T+ SVL
Sbjct: 338 GDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVL 397
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+AC+++G L G +H Y+ + D K +V V N LID+Y +CG ++ A +VF M K+ V
Sbjct: 398 SACSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSV 457
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SW S+I+G AVNGFV E F+ M ++G +P SF G L AC+HAGL++ GL YF+ M
Sbjct: 458 SWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFESM 517
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+ +Y + P ++HYGC+VDL SR+G L+ A ++ MP+ P+ V+ LL+AC+ +++L
Sbjct: 518 EHVYGLRPEMKHYGCVVDLLSRSGELDRAYEFIKQMPVVPDVVLWRILLSACKLHRNLVL 577
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
AE L++LDP NYVLL+N YA +WD A ++R M +QK SSIE+
Sbjct: 578 AEIATSKLLELDPSNSGNYVLLSNTYAGSDRWDDASRMRDLMVVGDVQKPSSWSSIEV 635
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 158/342 (46%), Gaps = 66/342 (19%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
M G +++TFI L C+ + G + H V KLG + + + +L+ MY
Sbjct: 148 MYNQGILGDNLTFIYLFKACSRVKD--VLHGQVFHVQVLKLGFG-SYLFIENSLIRMYGY 204
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
FG + GY A ++FD+M RD +SW +L+ G+
Sbjct: 205 FGEL-----------------------GY--------AQKVFDKMDDRDLVSWNSLICGY 233
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
+ F+E L+ F M+ + V D VT++ V+ AC+ + G+ + +Y+ + +V
Sbjct: 234 SQCNRFKEVLDLFNLMREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDV 293
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV------------- 297
+ N+LID+Y R G ++ AR+VF RM ++ +VSWN+++ G+A G +
Sbjct: 294 YLGNSLIDMYGRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIR 353
Query: 298 ------------------GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+AL+ F M KPD ++ + L+ACSH GL++ G
Sbjct: 354 NVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVH 413
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ M + + + + ++D+Y + G ++ AL V +M K
Sbjct: 414 EYMCR-HDIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKKK 454
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 115/224 (51%), Gaps = 7/224 (3%)
Query: 186 LLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
L+ G + EA+ + ++ + G+ D +T I + AC+ V + G H VLK
Sbjct: 127 LIRGLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKDVLHGQVFHVQVLKL 186
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
F + + N+LI +Y G + +A++VF +M R LVSWNS+I G++ E L+ F
Sbjct: 187 GFGSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQCNRFKEVLDLF 246
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLY 362
N M++ D V+ + ACS+ L EDG+ ++K I I+ Y ++D+Y
Sbjct: 247 NLMREANVTADSVTMVKVILACSY--LCEDGV-VDSMVKYIEDKHVDIDVYLGNSLIDMY 303
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
R G ++ A V + M K N V ++L T GD++ A++L
Sbjct: 304 GRRGLVDLARRVFDRMQEK-NIVSWNAMLTGYATAGDLVAAKKL 346
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/354 (46%), Positives = 225/354 (63%), Gaps = 3/354 (0%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVR--DAISWTALLNGFVKRGYFEEALECFREMQ 207
F N+++ Y G ESA ++FDEMPVR + +SW ++LN F G E L F EM
Sbjct: 840 FVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEML 899
Query: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267
PD TI+SVL ACA G L +G +H YV K +N V N LIDLY++CG +
Sbjct: 900 GVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVN 959
Query: 268 FARQVFQRMH-KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
AR++F+ M RT+VSW S+IVG A NGF EALE F+ M++E P ++ G L AC
Sbjct: 960 DARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYAC 1019
Query: 327 SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVV 386
SH GL++DG RYFD MK+ Y +SPRIEH GC+VDL RAGR+E+A + + MP++PN VV
Sbjct: 1020 SHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVV 1079
Query: 387 LGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKG 446
+LL +C + L + + LV+LDPG +YVLL+N+YAAVG W +R+TM
Sbjct: 1080 WRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVK 1139
Query: 447 RGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
++K PG S +E+ + ++EF+ GDRSH ESE IY ML ++ L+ GY+P T
Sbjct: 1140 DRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRT 1193
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 87/188 (46%), Gaps = 3/188 (1%)
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD T ++ ACA + L G +H K F V V N+L+ LY CG E A +V
Sbjct: 802 PDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKV 861
Query: 273 FQRM--HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
F M R LVSWNS++ FA NG E L F M F PDG + LTAC+ G
Sbjct: 862 FDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFG 921
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
+ G R ++K+ V ++DLY++ G + DA + E M + V SL
Sbjct: 922 ALALGRRVHVYVEKVGLVE-NSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSL 980
Query: 391 LAACRTKG 398
+ G
Sbjct: 981 IVGLAANG 988
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 42/229 (18%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S ++ +GR E F M P+ T +++L+ CA+F L LG +H
Sbjct: 873 VSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEF--GALALGRRVH 930
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V K+GL N+ V AL+D+YAK G ++ DA R+
Sbjct: 931 VYVEKVGLVENS-HVSNALIDLYAKCGSVN------DARRI------------------- 964
Query: 166 ESAVRMFDEMPV-RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
F+EM + R +SWT+L+ G G+ +EALE F M+ + P +T++ VL A
Sbjct: 965 ------FEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYA 1018
Query: 225 CANVGTLGIGLWIHRYV--LKQDF--KDNVKVCNTLIDLYSRCGCIEFA 269
C++ G + G RY +K+D+ ++ ++DL R G +E A
Sbjct: 1019 CSHCGLVDDGF---RYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEA 1064
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 156/404 (38%), Positives = 253/404 (62%), Gaps = 9/404 (2%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC---ADFPSQCL 98
V V W S I + + R+ E F M + +T + ++S C D+
Sbjct: 1003 VKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMADC 1062
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
+ + H + +V +G L+D Y + G++ A VF M+ K++ T NAMI
Sbjct: 1063 MVRYIEHNHI------EVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITA 1116
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + G++ SA ++FD++P +D ISW++++ + + +F ++LE FR+MQ + V+PD V I
Sbjct: 1117 YAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVI 1176
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
SVL+ACA++G L +G WIH YV + + K + + N+LID++++CGC++ A QVF M +
Sbjct: 1177 ASVLSACAHLGALDLGKWIHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVFTDMEE 1236
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +SWNSII+G A NGF EAL+ F+SM EG +P+ V+F G L AC++ L+E+GL +
Sbjct: 1237 KDTLSWNSIILGLANNGFEDEALDIFHSMLTEGPRPNEVTFLGVLIACANRQLVEEGLDH 1296
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F+ MK ++ + P+++HYGC+VD+ SRAG+LE A++ + MP+ P+ VV LL ACRT G
Sbjct: 1297 FERMKSVHNLEPQMKHYGCVVDILSRAGQLEKAVSFISEMPLAPDPVVWRILLGACRTHG 1356
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRR 442
++ +AE K L +LDPG ++ +LL+N+YA+ +W A +RR
Sbjct: 1357 NVAVAEMATKKLSELDPGNSADSMLLSNIYASADRWSDAMNVRR 1400
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 131/352 (37%), Positives = 213/352 (60%), Gaps = 2/352 (0%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
GA +H LV + G + + V TAL+++Y + A VFD M VK+ +WN MI G+
Sbjct: 498 GAQLHALVVQKGFEFH-AYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVMITGFA 556
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G++E A +FD+MP R+ +SWT L++G+ + + EAL R M G+ P +T+++
Sbjct: 557 GWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLA 616
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKR 279
V+ A +N+G + +G ++ Y K+ + +V N+LIDLY++ G ++ + +VF M +R
Sbjct: 617 VIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRR 676
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
LVSW SII GFA++G EALE F M++ G KP+ ++F + ACSH GL+E GL +F
Sbjct: 677 NLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGLAFF 736
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M Y + P I+H+GCI+D+ RAGRL +A ++E +PM+ N V LL C G+
Sbjct: 737 KSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGCCSKYGE 796
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQK 451
+ + ER +K + DL+ ++ +L+N+ +G++ A + R+ + R I K
Sbjct: 797 VAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVK 848
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 166/381 (43%), Gaps = 74/381 (19%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD--FPSQCLFLGA 102
T W + + +S +A + + + G P+++TF +L CA P + G
Sbjct: 905 TFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKE----GE 960
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H V KLG ++ V +L+ +YA G + A VF+ M VK +WN++I GY +
Sbjct: 961 QMHNHVIKLGF-LLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYSQH 1019
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
+ +E L F+ MQ V+ D VT++ V+
Sbjct: 1020 NRL-------------------------------KEVLTLFKLMQAEEVQADKVTMVKVI 1048
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT-- 280
+AC ++G + + RY+ + +V + NTLID Y R G ++ A +VF +M +
Sbjct: 1049 SACTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTV 1108
Query: 281 -----------------------------LVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
L+SW+S+I ++ ++LE F MQ+
Sbjct: 1109 TLNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAK 1168
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
KPD V L+AC+H G ++ G D +++ + ++D++++ G +++A
Sbjct: 1169 VKPDAVVIASVLSACAHLGALDLGKWIHDYVRR-NNIKADTIMENSLIDMFAKCGCVQEA 1227
Query: 372 LNVVENMPMKP----NEVVLG 388
L V +M K N ++LG
Sbjct: 1228 LQVFTDMEEKDTLSWNSIILG 1248
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 176/357 (49%), Gaps = 28/357 (7%)
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ + D+ SA ++F ++ W LL G + ++A+ +++ Q G++PD +T
Sbjct: 885 LHQSDLVSAHKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFP 944
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
VL ACA G +H +V+K F ++ V N+LI LY+ CG + AR VF M +
Sbjct: 945 FVLKACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVK 1004
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+VSWNS+I G++ + + E L F MQ E + D V+ ++AC+H G D
Sbjct: 1005 DVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLG---DWSMAD 1061
Query: 340 DIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
+++ I ++ Y ++D Y R G+L+ A V M K N V L +++ A
Sbjct: 1062 CMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDK-NTVTLNAMITAYAKG 1120
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK----- 452
G+++ A+++ + + D S+ + Y+ + + ++ R M+ ++
Sbjct: 1121 GNLVSAKKIFDQIPNKDLISWSSMIC---AYSQASHFSDSLELFRQMQRAKVKPDAVVIA 1177
Query: 453 ------PGLSSIEIGSGIHEFMAGDRSHIESEHIY--SMLELLSFDLKLCGYVPETV 501
L ++++G IH+++ R++I+++ I S++++ + CG V E +
Sbjct: 1178 SVLSACAHLGALDLGKWIHDYVR--RNNIKADTIMENSLIDMFA----KCGCVQEAL 1228
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/505 (20%), Positives = 212/505 (41%), Gaps = 89/505 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD--FPSQCLFLGAM 103
V WTS IS G EA F M G PN ITF+++++ C+ Q L A
Sbjct: 679 VSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGL---AF 735
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT-WNAMIDGYMRR 162
+V + +D G ++DM + GR+ A + + + ++ + T W ++ +
Sbjct: 736 FKSMVYEYNIDPEIKHFG-CIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGCCSKY 794
Query: 163 GDI---ESAVRMFDEMPVRDAISWTALLNGFVKRGYF---EEALECFREMQISGVEPDYV 216
G++ E A++M ++ + L N + G F E+A + + +I ++ +
Sbjct: 795 GEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVKLQEAVM 854
Query: 217 TIISVLNACANVGTL-----GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
+ L+A V L + I Y L Q DL S A +
Sbjct: 855 EAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQS------------DLVS-------AHK 895
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
VF+++ T WN+++ G A + +A+ ++ Q++G KPD ++F L AC+
Sbjct: 896 VFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCA 955
Query: 332 IEDGLRYFDIMKK-------------IYRVSP-----------------RIEHYGCIVDL 361
++G + + + K IY + + + ++
Sbjct: 956 PKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGG 1015
Query: 362 YSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD 418
YS+ RL++ L + + M ++ ++V + +++AC GD +A+ +++Y+ VD
Sbjct: 1016 YSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEVD 1075
Query: 419 SNYVLLANM----YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSH 474
V L N Y +G+ A K+ MK + +++ + + I + G +
Sbjct: 1076 ---VYLGNTLIDYYCRIGQLQSAEKVFSQMKDK--------NTVTLNAMITAYAKGG-NL 1123
Query: 475 IESEHIYSML---ELLSFDLKLCGY 496
+ ++ I+ + +L+S+ +C Y
Sbjct: 1124 VSAKKIFDQIPNKDLISWSSMICAY 1148
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 36/247 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT I + R+ AEA M G +P+ IT + ++ ++ + +G M++
Sbjct: 577 VSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLAVIPAISNLGG--ILMGEMLN 634
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF-TWNAMIDGYMRRGD 164
G K G+ ++ VG +L+D+YAK G + + VFD M + + +W ++I G
Sbjct: 635 GYCEKKGI-MSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISG------ 687
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
F G EALE F EM+ +G++P+ +T +SV+NA
Sbjct: 688 -------------------------FAMHGLSVEALELFAEMRRAGIKPNRITFLSVINA 722
Query: 225 CANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
C++ G + GL + V + + +K +ID+ R G + A Q+ + + V+
Sbjct: 723 CSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVT 782
Query: 284 WNSIIVG 290
I++G
Sbjct: 783 VWRILLG 789
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 112/266 (42%), Gaps = 43/266 (16%)
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
+A+++FD+ P W A L + + EAL F+ + + D VL ACA
Sbjct: 436 TALKVFDQSPA----PWRAFLKAYSHGPFPLEALHLFKHAR-QHLADDTFVFTFVLKACA 490
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+G G +H V+++ F+ + V LI++Y C+ AR+VF M + +VSWN
Sbjct: 491 GLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNV 550
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK-- 344
+I GFA G V A F+ M VS+TG + + A L + L M
Sbjct: 551 MITGFAGWGEVEYARLLFDQMPCRNV----VSWTGLIDGYTRACLYAEALTLLRHMMAGG 606
Query: 345 -------IYRVSPRIEHYGCI-------------------------VDLYSRAGRLEDAL 372
+ V P I + G I +DLY++ G ++++L
Sbjct: 607 ISPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSL 666
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKG 398
V + M + N V S+++ G
Sbjct: 667 KVFDEMLDRRNLVSWTSIISGFAMHG 692
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 168/427 (39%), Positives = 257/427 (60%), Gaps = 5/427 (1%)
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
G PN +F+ C + C+ G + K+GLD NV V AL+ M+ K+GR+
Sbjct: 273 GYFPNRYSFVFAFGACGN--GMCVREGEQVFTHAVKVGLD-GNVFVVNALIGMFGKWGRV 329
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
+ A VFD+ + ++WN MI Y+ G++ A +FDEM RD +SW+ ++ G+V+ G
Sbjct: 330 EDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVG 389
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
F EAL+ F +M S V+P+ T++S L AC+N+ L G WIH Y+ + + K N ++
Sbjct: 390 CFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLA 449
Query: 255 TLIDLYSRCGCIEFARQVFQRMH-KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
+LID+Y++CG I+ A VF KR + WN++I GFA++G EA+ F M+ E
Sbjct: 450 SLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVS 509
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
P+ V+F L ACSH ++++G YF++M Y ++P IEHYGC+VDL SR+G L+D+
Sbjct: 510 PNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEE 569
Query: 374 VVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGK 433
++ +MPM P+ + G+LL ACR D+ R+ + + ++DP VLL N+Y+ G+
Sbjct: 570 MILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGR 629
Query: 434 WDGAGKIRRTMKGRGIQKK-PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
W+ A +R + +KK PG SSIE+ HEF+ GDRSH +S IYS L+ + LK
Sbjct: 630 WNEARMVREKNEINSDRKKIPGFSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMISKLK 689
Query: 493 LCGYVPE 499
+ GYVPE
Sbjct: 690 IAGYVPE 696
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 142/338 (42%), Gaps = 80/338 (23%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I+ + + G EA F +M PN T ++ L+ C++ + L G I
Sbjct: 375 VVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVA--LDQGKWI 432
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS-FTWNAMIDGYMRRG 163
H + + + N+ ++ + L+DMYAK G +D A+ VF +VK + WNAMI G+ G
Sbjct: 433 HVYIRRDNIKMNDRLLAS-LIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHG 491
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
E A+ +F+ +M++ V P+ VT I++LN
Sbjct: 492 KPEEAINVFE-------------------------------KMKVEKVSPNKVTFIALLN 520
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRMHKRTL 281
AC++ + G + ++ D+ N ++ + ++DL SR G ++ + ++ M
Sbjct: 521 ACSHGYMVKEGK-SYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSM----- 574
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
PD + L AC +E G R I
Sbjct: 575 -----------------------------PMAPDVAIWGALLNACRIYKDMERGYRIGRI 605
Query: 342 MKKIYRVSPRIEHYGCIV---DLYSRAGRLEDALNVVE 376
+K+I P H GC V ++YS +GR +A V E
Sbjct: 606 IKEI---DP--NHIGCNVLLGNIYSTSGRWNEARMVRE 638
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 164/438 (37%), Positives = 258/438 (58%), Gaps = 9/438 (2%)
Query: 66 LEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALL 125
L ++ M H PN TF +L+ C +H V K G + + L+
Sbjct: 89 LFYSHMLQHCVTPNAFTFPSLIRACKLEEE-----AKQLHAHVLKFGFGGDTYALNN-LI 142
Query: 126 DMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR-DAISWT 184
+Y FG +D A VF M + +W +++ GY + G ++ A R+F+ MP + +++SW
Sbjct: 143 HVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWN 202
Query: 185 ALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
A++ FVK F EA FR M++ +E D ++L+AC VG L G+WIH+YV K
Sbjct: 203 AMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEK 262
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
+ K+ T+ID+Y +CGC++ A VF + + + SWN +I GFA++G +A+
Sbjct: 263 TGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRL 322
Query: 304 FNSMQKEGF-KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M++E PD ++F LTAC+H+GL+E+G YF M ++ + P EHYGC+VDL
Sbjct: 323 FKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLL 382
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
+RAGRLE+A V++ MPM P+ VLG+LL ACR G++ L E + +++LDP YV
Sbjct: 383 ARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRYV 442
Query: 423 LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS 482
+L NMYA+ GKW+ +R+ M RG++K+PG S IE+ ++EF+AG R H +E IY+
Sbjct: 443 ILGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEMEGVVNEFVAGGRDHPLAEAIYA 502
Query: 483 MLELLSFDLKLCGYVPET 500
+ + +++ G+VP+T
Sbjct: 503 KIYEMLESIRVVGFVPDT 520
>gi|125546973|gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 169/446 (37%), Positives = 252/446 (56%), Gaps = 7/446 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL--GAM 103
V T+ H SG+ A+A F M G P+++ L C S G M
Sbjct: 77 VPRTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVAVAVALGACHGAGSWTARRNPGKM 136
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH LV G+ +V V T L+ +Y + G + ++ VFD M +S+ TWNAM+ Y R G
Sbjct: 137 IHALVVTSGI-VPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQYARHG 195
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM---QISGVEPDYVTIIS 220
+++A MF MP RD +SW +L G+ G EAL FR+M V P+ T+ +
Sbjct: 196 KVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMST 255
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKR 279
+L ACA G L G+W+H Y+ + D+ + LID+Y +CG I+ A QVF++ K+
Sbjct: 256 ILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKK 315
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
L SW ++I G A++G +AL F+ MQ G PD V+ G L AC+H GL+++GL YF
Sbjct: 316 DLFSWTTVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYF 375
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M+ +R++P+IEHYGC++DL R GRL++A +++ MPM PN V+ G+ L+AC+ G+
Sbjct: 376 YSMEAKFRITPKIEHYGCMIDLLGRIGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGN 435
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L + + L LDP V+L++MYA W G + RR M ++K PG SSIE
Sbjct: 436 MELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIE 495
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLE 485
+ +HEF+AG H + I S+L+
Sbjct: 496 LKGEVHEFVAGGSQHPQYAEICSVLQ 521
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 132/351 (37%), Gaps = 78/351 (22%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH L+ K GL + TALL YA G D
Sbjct: 31 IHCLLLKAGLLHVGAHLPTALLSAYAALGSPD---------------------------- 62
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
A R+FDEMP + + TA+ V G +A+ F +M GV PD V + L
Sbjct: 63 ---HARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVAVAVALG 119
Query: 224 ACANVGTLGI----GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ----- 274
AC G+ G IH V+ +V V LI +Y G + +R+VF
Sbjct: 120 ACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSR 179
Query: 275 --------------------------RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
M +R +VSWN+++ G+ V G EAL F M
Sbjct: 180 STITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMV 239
Query: 309 KE---GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG----CIVDL 361
P+ + + L AC+ AG +E G I Y R+ G C++D+
Sbjct: 240 SPSSCAVHPNVPTMSTILGACAGAGCLETG-----IWVHAYIERNRMNDDGYLDRCLIDM 294
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD 412
Y + G +++AL V E P K + +++ G A R+ + D
Sbjct: 295 YCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQD 345
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 161/447 (36%), Positives = 270/447 (60%), Gaps = 4/447 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I + ++G EA F M G + T +LL C+ + L G ++
Sbjct: 111 VVSWNSMIGGYAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGN--LEFGRLV 168
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H L+ G ++++G AL+DMY+K G + +A F+ M +KS +W +M+ + G
Sbjct: 169 HCLMLVSG-SPVDLILGGALVDMYSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGS 227
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+++A FD MP R+ +SW +++ +V+RG + EAL+ +++MQ G PD T++ VL+A
Sbjct: 228 VDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSA 287
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C +G L +G +H Y+ ++ + N+L+D+Y++CG ++ A ++F+ M R +VSW
Sbjct: 288 CGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSW 347
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N II G A++G +A+ +F SM + PDG++F L++CSH GL+E G YF+ M+
Sbjct: 348 NVIIGGLAMHGRALDAITFFRSMVRNT-SPDGITFVALLSSCSHGGLLETGQHYFESMRH 406
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y V +EHY C+VDL R G LE A+ +++ MPMKP+ VV G+LL ACR G++ + +
Sbjct: 407 VYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGK 466
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+++K L++L+ +VL++N+ +W+ ++R+ MK RG +K G+SSIEI + I
Sbjct: 467 QVIKQLLELEGISGGLFVLISNLLYETNQWEDMKRLRKLMKERGTRKDMGVSSIEINNSI 526
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDL 491
HEF D H S IY++++ LS+ L
Sbjct: 527 HEFGVEDIRHESSSEIYAVVDQLSYHL 553
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 150/370 (40%), Gaps = 69/370 (18%)
Query: 42 VNPTVQWTSSISR-HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
++P ++I+R +C S EA M G PN T ++ C +Q
Sbjct: 6 LDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTR--AQAWDN 63
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
+HG+ KLG V F NA++ Y
Sbjct: 64 ALAVHGVALKLGF--------------------------------VGQVFVANALLHSYA 91
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G + + R FDEM R+ +SW +++ G+ + G EA F EM+ G D T+ S
Sbjct: 92 SAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGDTREACALFGEMRRQGFLGDEFTLAS 151
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG-------CIEF----- 268
+L AC+ G L G +H +L ++ + L+D+YS+CG C E
Sbjct: 152 LLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCFEMMPIKS 211
Query: 269 -------------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
AR F M +R VSWN++I + G EAL+ + MQ
Sbjct: 212 VVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQMQS 271
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
G PD + L+AC G + G + + I I+ +P I ++D+Y++ G++
Sbjct: 272 HGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIH--NPDISLINSLLDMYAKCGQV 329
Query: 369 EDALNVVENM 378
+ A+ + M
Sbjct: 330 DTAIRLFREM 339
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 123/278 (44%), Gaps = 5/278 (1%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
MFD + D + + + + EAL R M GV P+ T+ V+ AC
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
L +H LK F V V N L+ Y+ G + +R+ F M R +VSWNS+I G
Sbjct: 61 WDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGG 120
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
+A G EA F M+++GF D + L ACS G +E G R + +
Sbjct: 121 YAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFG-RLVHCLMLVSGSPV 179
Query: 351 RIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
+ G +VD+YS+ G L A E MP+K + V S+L A G + A ++
Sbjct: 180 DLILGGALVDMYSKCGDLCMARRCFEMMPIK-SVVSWTSMLCAQTKHGSVDAARCWFDHM 238
Query: 411 VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
+ + ++ + + Y G++ A + + M+ G
Sbjct: 239 PERNT---VSWNTMISCYVQRGQYHEALDLYKQMQSHG 273
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 150/319 (47%), Positives = 225/319 (70%)
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
SWT+++ G+V+ G +EA+ F +M+ +GV+ + VT+++VL ACA++G L +G+ IH Y
Sbjct: 194 SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYS 253
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
+ FK NV++ NTLID+Y +CGC+E A +VF+ M +RT+VSW+++I G A++G EAL
Sbjct: 254 NRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEAL 313
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
F+ M + G +P+GV+F G L ACSH GLI +G R+F M + Y + P+IEHYGC+VDL
Sbjct: 314 RLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDL 373
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
SRAG L +A + NMPMKPN VV G+LL ACR ++ +AE +K+L++LDP D Y
Sbjct: 374 LSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYY 433
Query: 422 VLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIY 481
V+L+N+YA G+W+ ++R+ MK R ++K PG SSI + +HEF+AG+ SH ++E I+
Sbjct: 434 VVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIF 493
Query: 482 SMLELLSFDLKLCGYVPET 500
E L +++L GYVP T
Sbjct: 494 QRWEELLEEMRLKGYVPNT 512
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 146/336 (43%), Gaps = 79/336 (23%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WTS I+ + + G+ EA F +M G N +T + +L+ CAD + L LG IH
Sbjct: 195 WTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGA--LDLGMRIHEY 252
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ G RN +R+ N +ID Y++ G +E
Sbjct: 253 SNRHGFKRN---------------------------VRIS-----NTLIDMYVKCGCLEE 280
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++F+EM R +SW+A++ G G EEAL F +M G+EP+ VT I +L+AC++
Sbjct: 281 ACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSH 340
Query: 228 VGTLGIGLWIHRYV--LKQDFK--DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
+G + G R+ + +D+ ++ ++DL SR
Sbjct: 341 MGLISEG---RRFFASMTRDYGIIPQIEHYGCMVDLLSRA-------------------- 377
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
G + EA E+ +M KP+GV + L AC +E + +K
Sbjct: 378 -----------GLLHEAHEFILNMP---MKPNGVVWGALLGACRVHKNVEMAE---EAIK 420
Query: 344 KIYRVSPRIE-HYGCIVDLYSRAGRLEDALNVVENM 378
+ + P + +Y + ++Y+ AGR ED V + M
Sbjct: 421 HLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFM 456
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 269/449 (59%), Gaps = 7/449 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I + ++G E F M G + T ++LL C+ + L +G ++
Sbjct: 178 VVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGN--LEIGRLV 235
Query: 105 HGLVCKLGLD--RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
H C++ + R ++++ +AL+DMY K G + +A F+ M +KS +W +M+ +
Sbjct: 236 H---CRMLVSGSRVDLILESALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKH 292
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G + +A FD MP R+ +SW A+++ +V+RG EAL+ + +MQ G+ PD +T+++VL
Sbjct: 293 GSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVL 352
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+A +G L +G +H Y+ + +V + N+L+D+Y++CG ++ A +F M R +V
Sbjct: 353 SASGRIGDLTVGKMVHLYIRDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVV 412
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN II G A++G + + +F SM + F PDG++F L+ACSH GL+E G YF+ M
Sbjct: 413 SWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESM 472
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+ +Y V +EHY C+VDL R G LE A+ +++ MPMKP+ VV G+LL ACR G++ +
Sbjct: 473 RHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKI 532
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
+++K L++L+ +VL++N+ +W+ ++R+ MK G +K G+SSIEI +
Sbjct: 533 GRQVIKQLLELEGISGGLFVLISNLLYETHQWEDMKRLRKLMKEWGTRKDMGVSSIEINN 592
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDL 491
IHEF D H S IY++++ LS+ L
Sbjct: 593 SIHEFGVEDIRHERSSEIYAVVDQLSYHL 621
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 157/365 (43%), Gaps = 68/365 (18%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + I +C S EA M G PN T ++ C +Q +H
Sbjct: 78 VMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACT--IAQAREHALAVH 135
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G+ +LGL V VG ALL YA G + + FD M ++ +WN+MI GY + GD
Sbjct: 136 GVALRLGL-VGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDT 194
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+F EM ++G+ E D T++S+L AC
Sbjct: 195 REVCSLFGEMR---------------RQGFLE----------------DEFTLVSLLIAC 223
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ----------- 274
+ G L IG +H +L + ++ + + L+D+Y +CG + AR+ F+
Sbjct: 224 SQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRCFEMMPIKSVVSWT 283
Query: 275 --------------------RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
M +R +VSWN++I + G EAL+ +N MQ +G P
Sbjct: 284 SMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAP 343
Query: 315 DGVSFTGALTACSHAGLIEDG-LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
D ++ L+A G + G + + I IY +P + ++D+Y++ G+++ A++
Sbjct: 344 DEITLVAVLSASGRIGDLTVGKMVHLYIRDNIY--NPDVSLVNSLLDMYAKCGQVDTAIS 401
Query: 374 VVENM 378
+ M
Sbjct: 402 LFSEM 406
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 110/239 (46%), Gaps = 4/239 (1%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G + A R+FD +P D + + ++ + EAL R M G+ P+ T+ V+
Sbjct: 60 GVLCHARRLFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVV 119
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC L +H L+ V V N L+ Y+ G + +R+ F M R +V
Sbjct: 120 KACTIAQAREHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVV 179
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDI 341
SWNS+I G+A G E F M+++GF D + L ACS G +E G L + +
Sbjct: 180 SWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRM 239
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+ RV +E +VD+Y + G L A E MP+K + V S+L A G +
Sbjct: 240 LVSGSRVDLILE--SALVDMYGKCGDLWMARRCFEMMPIK-SVVSWTSMLCAQTKHGSV 295
>gi|224126329|ref|XP_002329527.1| predicted protein [Populus trichocarpa]
gi|222870236|gb|EEF07367.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 242/377 (64%), Gaps = 3/377 (0%)
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTAL 186
MY K G + +A +FD M K+ W +M+ GY+ G+++ A +F+ PV+D + WTA+
Sbjct: 1 MYCKCGCLSVARKIFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAM 60
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
+NG+V+ +F+EA+ F+EMQI V+PD ++++L CA +G L G WIH Y+ ++
Sbjct: 61 INGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKGI 120
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
+ V +LI++YS+CGCIE A ++F + ++ +W SII G A+NG +ALE F+
Sbjct: 121 PVDAVVGTSLIEMYSKCGCIEKALRIFCGLREKDTATWTSIICGLAMNGKTSKALELFSK 180
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M++ PD V+F G L+ACSH GL+E+G +F+ M IY + P++EHYGC++DL RAG
Sbjct: 181 MKQVEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLIDLLGRAG 240
Query: 367 RLEDALNVVENMPMKPNEVVL---GSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
+L++A +++ + NE+++ GSLL+ACR ++ + ER+ + LV ++ S + L
Sbjct: 241 QLDEAEELIKKIVNANNEIIVPLYGSLLSACRIYKNVQMGERVAEQLVKIESRDSSVHTL 300
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSM 483
LAN+YA+ G+W ++RR MK G++K PG SSIE+ +HEF+ G+ S E IYSM
Sbjct: 301 LANIYASAGRWVDVNRVRREMKDLGVKKVPGCSSIEVDGIVHEFLVGNPSCSEMREIYSM 360
Query: 484 LELLSFDLKLCGYVPET 500
L+ + D L + +T
Sbjct: 361 LDRMRLDFALQSCINDT 377
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 8/180 (4%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S V V WT+ I+ + + EA F M + P+ + LL+GCA + L
Sbjct: 48 RSPVKDVVLWTAMINGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALLTGCAQMGA--L 105
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G IHG + + G+ + V VGT+L++MY+K G ++ A +F +R K + TW ++I G
Sbjct: 106 EQGTWIHGYIDEKGIPVDAV-VGTSLIEMYSKCGCIEKALRIFCGLREKDTATWTSIICG 164
Query: 159 YMRRGDIESAVRMFDEM----PVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEP 213
G A+ +F +M + D +++ +L+ G EE E F M I +EP
Sbjct: 165 LAMNGKTSKALELFSKMKQVEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEP 224
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 176/430 (40%), Positives = 243/430 (56%), Gaps = 37/430 (8%)
Query: 74 HGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR 133
H P+ T+ LL CA L G +H CK GL
Sbjct: 116 HLAPPDTHTYPPLLQACARL--LALRYGEGLHAEACKNGL-------------------- 153
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV--RDAISWTALLNGFV 191
V F N+++ Y G ESA R+FDE+P R+ +SW ++LNGF
Sbjct: 154 ------------VSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVLNGFA 201
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
G E L FREM PD T++SVL ACA +G L +G +H +V K N
Sbjct: 202 ANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGNAH 261
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
N LIDLY++CG ++ AR++F M RT+VSW S+IVG AVNGF +AL+ F+ M++E
Sbjct: 262 AGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMMERE 321
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
P ++ G L ACSH GL++DG RYFD MK Y ++PRIEH GC+VDL RAGR+E+
Sbjct: 322 KLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEE 381
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
A N + MP++PN VV +LL AC + + E LV+LDPG +YVLL+N+YA
Sbjct: 382 AHNYITTMPLEPNAVVWRTLLGACAMHKKLEIGEAAWARLVELDPGHSGDYVLLSNLYAG 441
Query: 431 VGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFD 490
VG+W +R+TM G++K PG S +E+ + ++EF+ GDRSH E++ IY ML ++
Sbjct: 442 VGRWADVHVLRKTMVTHGVRKNPGHSLVELRNSVYEFVMGDRSHPETDQIYEMLGDIAER 501
Query: 491 LKLCGYVPET 500
L+ GY+P T
Sbjct: 502 LRRQGYIPHT 511
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 101/227 (44%), Gaps = 8/227 (3%)
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
+P D S +L F AL R PD T +L ACA + L G
Sbjct: 85 LPSPDPFSLNTVLRIFASSARPRVALALHRRHL---APPDTHTYPPLLQACARLLALRYG 141
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM--HKRTLVSWNSIIVGFA 292
+H K V V N+L+ LY CG E A +VF + +R LVSWNS++ GFA
Sbjct: 142 EGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVLNGFA 201
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
NG E L F M + F PDG + LTAC+ G++ G R + K+ V
Sbjct: 202 ANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGN-- 259
Query: 353 EHYG-CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
H G ++DLY++ G ++DA + M + V SL+ G
Sbjct: 260 AHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNG 306
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 116/263 (44%), Gaps = 45/263 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S ++ +GR E F M P+ T +++L+ CA+ L LG +H
Sbjct: 191 VSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEI--GVLALGRRVH 248
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V K+GL N G AL+D+YAK G +D
Sbjct: 249 VFVAKVGLV-GNAHAGNALIDLYAKCGGVD------------------------------ 277
Query: 166 ESAVRMFDEMPV-RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A +MF EM V R +SWT+L+ G G+ +AL+ F M+ + P +T++ VL A
Sbjct: 278 -DARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYA 336
Query: 225 CANVGTLGIGLWIHRYV--LKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KR 279
C++ G + G RY +K ++ ++ ++DL R G +E A M +
Sbjct: 337 CSHCGLVDDGF---RYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEP 393
Query: 280 TLVSWNSIIVGFAVNGF--VGEA 300
V W +++ A++ +GEA
Sbjct: 394 NAVVWRTLLGACAMHKKLEIGEA 416
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 232/351 (66%), Gaps = 1/351 (0%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
+ N+++ Y GD+ SA ++FD+MP +D ++W +++NGF + G EEAL + EM +
Sbjct: 157 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLK 216
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G++PD TI+S+L+ACA +G L +G H Y++K N+ N L+DLY+RCG +E A
Sbjct: 217 GIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ-KEGFKPDGVSFTGALTACSH 328
+ +F M + VSW S+IVG AVNG EA+E F +M+ KEG P ++F G L ACSH
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSH 336
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
G++++G YF M + Y++ PRIEH+GC+VDL +RAG+++ A + MPM+PN V+
Sbjct: 337 CGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWR 396
Query: 389 SLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
+LL AC GD LAE ++ L+P +YVLL+NMYA+ +W KIR+ M G
Sbjct: 397 TLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDG 456
Query: 449 IQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
++K PG S +E+G+ +HEF+ GD+SH +++ IY+ L+ ++ L+L GYVP+
Sbjct: 457 VRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQ 507
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 122/226 (53%), Gaps = 4/226 (1%)
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLG 232
E P+ + W L+ G+ + G A+ +REM+ SG VEPD T +L A + +
Sbjct: 80 EKPI-NVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVR 138
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
+G IH V++ F + V N+L+ LY+ CG + A +VF +M ++ LV+WNS+I GFA
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
NG EAL + M +G KPDG + L+AC+ G + G R+ M K+ ++ +
Sbjct: 199 ENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKV-GLTRNL 257
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
++DLY+R GR+E+A + + M K N V SL+ G
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVGLAVNG 302
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ +G+ EA +T M L G P+ T ++LLS CA + L LG H
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGA--LTLGKRFH 245
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K+GL RN + LLD+YA+ GR++ A +FD M K+S +W ++I G G
Sbjct: 246 VYMIKVGLTRN-LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLG 304
Query: 166 ESAVRMFDEMPVRDA-----ISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTII 219
+ A+ +F M ++ I++ +L G +E E FR M + +EP
Sbjct: 305 KEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFG 364
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
+++ A G + + Y+LK + NV + TL+
Sbjct: 365 CMVDLLARAGQVKKA---YEYILKMPMQPNVVIWRTLL 399
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 166/457 (36%), Positives = 273/457 (59%), Gaps = 7/457 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W +S RSG EA + F ++ G P+ +T ++L D S+ L +G +IH
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGD--SEMLNMGRLIH 275
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V K GL ++ ++ +A++DMY K G + +F+ + + NA I G R G +
Sbjct: 276 GYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 166 ESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+ A+ MF+ + + +SWT+++ G + G EALE FREMQ++GV+P++VTI S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L AC N+ LG G H + ++ DNV V + LID+Y++CG I ++ VF M + L
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
V WNS++ GF+++G E + F S+ + KPD +SFT L+AC GL ++G +YF +
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M + Y + PR+EHY C+V+L RAG+L++A ++++ MP +P+ V G+LL +CR + ++
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LAE + L L+P YVLL+N+YAA G W IR M+ G++K PG S I++
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+ ++ +AGD+SH + + I ++ +S +++ G+ P
Sbjct: 635 NRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRP 671
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 186/393 (47%), Gaps = 45/393 (11%)
Query: 39 KSTVNPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
+S +PT+ ++S I ++ ++ F+RM HG P+ L CA+ +
Sbjct: 74 QSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA-- 131
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
+G IH + C GLD + + G+ + MY + GRM A VFD M K T +A++
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGS-MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLC 190
Query: 158 GYMRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEP 213
Y R+G +E VR+ EM + +SW +L+GF + GY +EA+ F+++ G P
Sbjct: 191 AYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP 250
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLY------------- 260
D VT+ SVL + + L +G IH YV+KQ + V + +ID+Y
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 261 ------------------SRCGCIEFARQVFQRMHKRTL----VSWNSIIVGFAVNGFVG 298
SR G ++ A ++F+ ++T+ VSW SII G A NG
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 299 EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCI 358
EALE F MQ G KP+ V+ L AC + + G +++ + + +
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSAL 429
Query: 359 VDLYSRAGRLEDALNVVENMPMKPNEVVLGSLL 391
+D+Y++ GR+ + V MP K N V SL+
Sbjct: 430 IDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLM 461
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 135/362 (37%), Gaps = 80/362 (22%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+I Y A + +P S+++L+ K F +++ F M G+ PD
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 215 YVTIISVLNACANVGTLGIGLWIH-------------------------------RYVLK 243
+ ++ CA + +G IH R V
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH----KRTLVSWNSIIVGFAVNGFVGE 299
+ +V C+ L+ Y+R GC+E ++ M + +VSWN I+ GF +G+ E
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLRYFDIMKKIYRV 348
A+ F + GF PD V+ + L + H +I+ GL +K +
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGL-----LKDKCVI 290
Query: 349 SPRIEHYG------CIVDLY------------------SRAGRLEDALNVVE---NMPMK 381
S I+ YG I+ L+ SR G ++ AL + E M+
Sbjct: 291 SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
N V S++A C G I A L + + GV N+V + +M A G G R
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREM--QVAGVKPNHVTIPSMLPACGNIAALGHGR 408
Query: 442 RT 443
T
Sbjct: 409 ST 410
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 18/192 (9%)
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
H +LK +++ + LI YS C A V Q + T+ S++S+I
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 298 GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP----RIE 353
+++ F+ M G PD C+ L F + K+I+ VS ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAE-------LSAFKVGKQIHCVSCVSGLDMD 150
Query: 354 HY--GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
+ G + +Y R GR+ DA V + M K + V +LL A KG + E +++ L
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDK-DVVTCSALLCAYARKGCL---EEVVRILS 206
Query: 412 DLD-PGVDSNYV 422
+++ G+++N V
Sbjct: 207 EMESSGIEANIV 218
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 179/504 (35%), Positives = 286/504 (56%), Gaps = 40/504 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSG--------------- 89
V W++ I+ + R G + EA F M G PN +++ +L+G
Sbjct: 170 VVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFR 229
Query: 90 ---------------CADFPSQCL---FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF 131
C CL +GA +HG V K GL + +V +A+LDMY K
Sbjct: 230 MMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVV-SAMLDMYGKC 288
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF----DEMPVRDAISWTALL 187
G + + VFD + + NA + G R G +++A+ +F D+ + ++WT+++
Sbjct: 289 GCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSII 348
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
+ G EALE FR+MQ GVEP+ VTI S++ AC N+ L G IH + L++
Sbjct: 349 ASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIF 408
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
D+V V + LID+Y++CG I+ AR+ F +M LVSWN+++ G+A++G E +E F+ M
Sbjct: 409 DDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMM 468
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+ G KPD V+FT L+AC+ GL E+G R ++ M + + + P++EHY C+V L SR G+
Sbjct: 469 LQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGK 528
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
LE+A ++++ MP +P+ V G+LL++CR ++ L E + L L+P NY+LL+N+
Sbjct: 529 LEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNI 588
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
YA+ G WD +IR MK +G++K PG S IE+G +H +AGD+SH + + I L+ L
Sbjct: 589 YASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKL 648
Query: 488 SFDLKLCGYVPET--VAGELYEND 509
+ +K GY+P+T V ++ E D
Sbjct: 649 NMQMKKSGYLPKTNFVLQDVEEQD 672
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 11/329 (3%)
Query: 27 TTPQISIQTNNSKSTVNPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFIT 85
+TPQ+S+ S +PT+ ++S I RS F+ + P+ +
Sbjct: 52 STPQLSLTL--SSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPS 109
Query: 86 LLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR 145
+ CA + L G +H G +++ V ++L MY K R+ A +FD M
Sbjct: 110 AIKSCASL--RALDPGQQLHAFAAASGFLTDSI-VASSLTHMYLKCDRILDARKLFDRMP 166
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV----RDAISWTALLNGFVKRGYFEEALE 201
+ W+AMI GY R G +E A +F EM + +SW +L GF G+++EA+
Sbjct: 167 DRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVG 226
Query: 202 CFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
FR M + G PD T+ VL A + + +G +H YV+KQ + V + ++D+Y
Sbjct: 227 MFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYG 286
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
+CGC++ +VF + + + S N+ + G + NG V ALE FN + + + + V++T
Sbjct: 287 KCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTS 346
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
+ +CS G + L F M+ Y V P
Sbjct: 347 IIASCSQNGKDLEALELFRDMQA-YGVEP 374
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 182/483 (37%), Positives = 274/483 (56%), Gaps = 15/483 (3%)
Query: 25 LTTTPQISIQTN-----NSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPN 79
+TT P I + T + + NP + +++ I + R+G + +T M + +P
Sbjct: 53 ITTLPHIPVHTYPHLLFSQVHSPNPFL-YSALIRAYARNGPFHHSIRLYTSMLNNNVSPV 111
Query: 80 HITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATV 139
TF L S + PS LG+ +H G N++ VG ++ MY KFG +D A
Sbjct: 112 SFTFSALFSLLKN-PS----LGSQLHLHAFLFGF-VNDLYVGNTIIHMYVKFGVLDCARK 165
Query: 140 VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
VFD M + TW +I Y R GD++SA +F +PV+D ++WT+++ G+ + ++A
Sbjct: 166 VFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKA 225
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD--NVKVCNTLI 257
L+ FR+M+ +GV D +T++ ++ACA +G G WI F NV V + LI
Sbjct: 226 LQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALI 285
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
D+YS+CG +E A VF+ M + + S++S+IVGFAV+G A++ F M + G KP+ V
Sbjct: 286 DMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHV 345
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
+F G TACSHAG++E G + F MK+ Y VSP +HY C+ DL RAG LE AL +V+
Sbjct: 346 TFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQT 405
Query: 378 MPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGA 437
MPM+PN V G+LL A G+ +AE + L +L+P NY+LL+ YA KWD
Sbjct: 406 MPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDV 465
Query: 438 GKIRRTMKGRGIQKKPGLSSIEIGSG-IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGY 496
++R+ M+ + ++K PG S +E +G IHEF AGD H E I L+ L LK GY
Sbjct: 466 SRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVKHPEINEIKKALDDLLQRLKCTGY 525
Query: 497 VPE 499
P+
Sbjct: 526 QPK 528
>gi|115456858|ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza sativa Japonica Group]
gi|113563600|dbj|BAF13943.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 531
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 166/446 (37%), Positives = 253/446 (56%), Gaps = 7/446 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL--GAM 103
V T+ H SG+ A+A F M G P+++ L C S G
Sbjct: 78 VPRTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVALAVALGACHGAGSWTARRNPGKK 137
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH L+ G++ +V V T L+ +Y + G++ ++ VFD M +S+ TWNAM+ Y R G
Sbjct: 138 IHALIVTSGIE-PDVFVSTELIRVYGECGKLAVSRRVFDDMPSRSTITWNAMLHQYARHG 196
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM---QISGVEPDYVTIIS 220
+++A +F MP RD +SW ++ G+ G EAL FR+M V P+ T+ +
Sbjct: 197 KVDTAYELFLAMPRRDVVSWNTVMAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMST 256
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKR 279
+L ACA G L G+W+H Y+ + D+ + LID+Y +CG I+ A QVF++ KR
Sbjct: 257 ILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKR 316
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
L SW ++I G A++G +AL F+ MQ G PD V+ G L AC+H GL+++GL YF
Sbjct: 317 DLFSWTTVICGLAMHGRATDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYF 376
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M+ +R++P+IEHYGC++DL R GRL++A +++ MPM PN V+ G+ L+AC+ G+
Sbjct: 377 YSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGN 436
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L + + L LDP V+L++MYA W G + RR M ++K PG SSIE
Sbjct: 437 MELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIE 496
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLE 485
+ +HEF+AG H + I S+L+
Sbjct: 497 LKGEVHEFVAGGSQHPQYAEICSVLQ 522
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 134/351 (38%), Gaps = 78/351 (22%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH L+ K GL + TALL YA G D
Sbjct: 32 IHCLLLKAGLLHVGAHLPTALLSAYAALGSPD---------------------------- 63
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
A R+FDEMP + + TA+ V G +A+ F +M GV PD V + L
Sbjct: 64 ---HARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVALAVALG 120
Query: 224 ACANVGTLGI----GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ----- 274
AC G+ G IH ++ + +V V LI +Y CG + +R+VF
Sbjct: 121 ACHGAGSWTARRNPGKKIHALIVTSGIEPDVFVSTELIRVYGECGKLAVSRRVFDDMPSR 180
Query: 275 --------------------------RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
M +R +VSWN+++ G+ V G EAL F M
Sbjct: 181 STITWNAMLHQYARHGKVDTAYELFLAMPRRDVVSWNTVMAGYCVAGRCREALGLFRQMV 240
Query: 309 KE---GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG----CIVDL 361
P+ + + L AC+ AG +E G I Y R+ G C++D+
Sbjct: 241 SPSSCAVHPNVPTMSTILGACAGAGCLETG-----IWVHAYIERNRMNDDGYLDRCLIDM 295
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD 412
Y + G +++AL V E P K + +++ G A R+ + D
Sbjct: 296 YCKCGSIDNALQVFEKAPRKRDLFSWTTVICGLAMHGRATDALRMFDMMQD 346
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 163/417 (39%), Positives = 253/417 (60%), Gaps = 5/417 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I + R R +E + F M + + +T + ++ C + + AMI
Sbjct: 862 VSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVL-GEWGVVDAMIE 920
Query: 106 GLV-CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ K+ +D V +G L+DMY + +DLA VFD MR ++ +WNAMI GY + G+
Sbjct: 921 YIEENKVEVD---VYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGN 977
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ +A ++FD+MP RD ISWT++++ + + G F +A+ F+EM ++ V+PD +T+ SVL+A
Sbjct: 978 LVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSA 1037
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L +G +H Y+ K D ++ V N LID+Y +CG +E VF+ M KR VSW
Sbjct: 1038 CAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSW 1097
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
S+I G AVNG AL F+ M +EG +P +F G L AC+HAG+++ GL YF+ M++
Sbjct: 1098 TSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMER 1157
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y ++P ++HYGC+VDL SR+G L A ++ MPM P+ VV LL+A + G++ LAE
Sbjct: 1158 VYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAE 1217
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
K L++ DP NY+L +N YA +W+ K+RR M+ + K SS+EI
Sbjct: 1218 IATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSVEIN 1274
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 189/426 (44%), Gaps = 78/426 (18%)
Query: 44 PTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPS-QCLFLG 101
PT+ W I ++ + EA + M N++T+ LL CA + C
Sbjct: 759 PTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACARISNVSC---- 814
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H V KLG D +++ V AL+ YA F + G+ R
Sbjct: 815 TTVHARVLKLGFD-SDLFVSNALIHGYAGFCEL-----------------------GFAR 850
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+ +FDEM RD +SW +L+ G+ + + E L F EM+++ V+ D VT++ V
Sbjct: 851 K--------VFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKV 902
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
+ AC +G G+ + Y+ + + +V + NTLID+Y R ++ AR+VF RM R +
Sbjct: 903 VLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNM 962
Query: 282 VSWNSIIVGFAVNGFV-------------------------------GEALEYFNSMQKE 310
VSWN++I+G+ G + G+A+ F M
Sbjct: 963 VSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVT 1022
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
KPD ++ L+AC+H G ++ G + ++K Y V+ I ++D+Y + G +E
Sbjct: 1023 KVKPDEITVASVLSACAHIGALDVGEAVHEYIRK-YDVNADIYVGNALIDMYCKCGAVEK 1081
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-----VLLA 425
L+V E M K + V S++A G A L + L GV + VLLA
Sbjct: 1082 GLSVFEEMG-KRDSVSWTSVIAGLAVNGSADSALNLFSLM--LREGVRPTHGTFVGVLLA 1138
Query: 426 NMYAAV 431
+A V
Sbjct: 1139 CAHAGV 1144
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 137/335 (40%), Gaps = 68/335 (20%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+I A +F ++P W ++ G+ + EA+ + M + + +T +L
Sbjct: 745 NILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLK 804
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA + + +H VLK F ++ V N LI Y+ + FAR+VF M +R LVS
Sbjct: 805 ACARISNVSCTT-VHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVS 863
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS---HAGLIEDGLRYFD 340
WNS+I G+ E L F M+ K D V+ + AC+ G+++ + Y +
Sbjct: 864 WNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIE 923
Query: 341 IMK---KIYRVSPRIEHYG--CIVDL----------------------YSRAGRLEDALN 373
K +Y + I+ YG +VDL Y +AG L A
Sbjct: 924 ENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARK 983
Query: 374 VVENMP----------------------------------MKPNEVVLGSLLAACRTKGD 399
+ ++MP +KP+E+ + S+L+AC G
Sbjct: 984 LFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGA 1043
Query: 400 IILAERLMKYLVDLDPGVDSNYV--LLANMYAAVG 432
+ + E + +Y+ D D YV L +MY G
Sbjct: 1044 LDVGEAVHEYIRKYDVNADI-YVGNALIDMYCKCG 1077
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 272/472 (57%), Gaps = 18/472 (3%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I+ + ++G + EA + F M G P+ +T +++S CA ++ G +
Sbjct: 217 VVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAE--REGRQV 274
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K R+++++ AL+DMYAK GR A +FD+M +S + +++ GY + +
Sbjct: 275 HAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSAN 334
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A +F +M ++ I+W L+ + + G EEA+ F +++ + P + T +VLNA
Sbjct: 335 VEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNA 394
Query: 225 CANVGTLGIGLWIHRYVLKQDFK------DNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
C N+ L +G H +VLK+ F+ +V V N+L+D+Y + G I+ +VF+RM
Sbjct: 395 CGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAA 454
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R VSWN++IVG+A NG +AL F M PD V+ G L+AC H+GL+++G R+
Sbjct: 455 RDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRH 514
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M + + ++P +HY C+VDL RAG L++A ++++MP +P+ V+ SLL ACR
Sbjct: 515 FHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHK 574
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ L ER L +LDP YVLL+NMYA +GKW ++RR+MK RG+ K+PG S I
Sbjct: 575 NVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWI 634
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL----------KLCGYVPET 500
EIGS ++ F+A D H I+S L ++ ++ L Y PE
Sbjct: 635 EIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEMCRTSIDGIDDDLMNYCPEA 686
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 159/310 (51%), Gaps = 4/310 (1%)
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG V K + ++ T L+ YA+ GR+ A VFD + ++++F++NA++ Y R G
Sbjct: 40 HGCVLKSPVAGETFLLNT-LVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGR 98
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVK--RGYFEEALECFREMQISGVEPDYVTIISVL 222
+ A +F+ +P D S+ A++ + RG+ +AL M + + S L
Sbjct: 99 PDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASAL 158
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+ACA L G +H V + D+V + L+D+Y++C AR+VF M +R +V
Sbjct: 159 SACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVV 218
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWNS+I + NG VGEAL F M GF PD V+ + ++AC+ +G + M
Sbjct: 219 SWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHM 278
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
K R+ + +VD+Y++ GR +A + ++MP + + V S+LA ++
Sbjct: 279 VKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSR-SVVSETSILAGYAKSANVED 337
Query: 403 AERLMKYLVD 412
A+ + +V+
Sbjct: 338 AQVVFSQMVE 347
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 233/351 (66%), Gaps = 1/351 (0%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
+ N+++ Y GD+ SA ++FD+MP +D ++W +++NGF + G EEAL + EM
Sbjct: 24 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 83
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G++PD TI+S+L+ACA +G L +G +H Y++K N+ N L+DLY+RCG +E A
Sbjct: 84 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 143
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTACSH 328
+ +F M + VSW S+IVG AVNGF EA+E F M+ EG P ++F G L ACSH
Sbjct: 144 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 203
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
G++++G YF M++ Y++ PRIEH+GC+VDL +RAG+++ A +++MPM+PN V+
Sbjct: 204 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 263
Query: 389 SLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
+LL AC GD LAE ++ L+P +YVLL+NMYA+ +W KIR+ M G
Sbjct: 264 TLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDG 323
Query: 449 IQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
++K PG S +E+G+ +HEF+ GD+SH +S+ IY+ L+ ++ L+ GYVP+
Sbjct: 324 VKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ 374
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 96/178 (53%), Gaps = 2/178 (1%)
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
+G IH V++ F + V N+L+ LY+ CG + A +VF +M ++ LV+WNS+I GFA
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
NG EAL + M +G KPDG + L+AC+ G + G R M K+ ++ +
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GLTRNL 124
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
++DLY+R GR+E+A + + M K N V SL+ G A L KY+
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 39/254 (15%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ +G+ EA +T M G P+ T ++LLS CA + L LG +H
Sbjct: 55 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA--LTLGKRVH 112
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K+GL RN + LLD+YA+ GR++ A +FD M K+S +W
Sbjct: 113 VYMIKVGLTRN-LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW------------- 158
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTIISVLNA 224
T+L+ G G+ +EA+E F+ M+ G+ P +T + +L A
Sbjct: 159 ------------------TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 200
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRM-HKRTL 281
C++ G + G R +++++K ++ + ++DL +R G ++ A + + M + +
Sbjct: 201 CSHCGMVKEGFEYFRR-MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 259
Query: 282 VSWNSIIVGFAVNG 295
V W +++ V+G
Sbjct: 260 VIWRTLLGACTVHG 273
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 273/478 (57%), Gaps = 38/478 (7%)
Query: 58 SGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNN 117
+ R + F M P+ +T +L A + LG +HG V KLGL+ ++
Sbjct: 116 NSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVD--VGLGRCLHGGVMKLGLEFDS 173
Query: 118 VMVGTALLDMYAKFGRM---------------------------------DL--ATVVFD 142
V +L+DMY K G + DL A +F+
Sbjct: 174 -FVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFE 232
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
AM +++ +WN++I+G++R GD++ A +F +MP ++ +SWT ++NGF + G E+AL
Sbjct: 233 AMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSM 292
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
F M GV P+ +T++S L AC +G L +G IH Y+ F+ N + L+D+Y++
Sbjct: 293 FWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAK 352
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
CG I+ A +VF + L++W+ +I G+A++G +AL+ F M+ G PD V F
Sbjct: 353 CGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAI 412
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP 382
LTACSH+G ++ GL +F+ M+ Y + P ++HY IVDL RAGRL++AL+ +++MP+ P
Sbjct: 413 LTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINP 472
Query: 383 NEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRR 442
+ V+ G+L ACR +I +AE + L+ L+P +YV L+N+YAAVG+W+ ++R
Sbjct: 473 DFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRT 532
Query: 443 TMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
MK RG++K PG S IE+ +H F+AGD +H+ +E I LE ++ K GY+PET
Sbjct: 533 LMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPET 590
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ I+ ++G +A F RM G PN +T ++ L C + L +G I
Sbjct: 270 VVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGA--LQVGERI 327
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + G N +GTAL+DMYAK G + A+ VF + K TW+ MI
Sbjct: 328 HNYLSSNGFQLNR-GIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMI-------- 378
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
W G+ G F++AL+CF +M+ +G+ PD V +++L A
Sbjct: 379 ------------------W-----GWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTA 415
Query: 225 CANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
C++ G + GL + L + +K ++DL R G ++ A Q M
Sbjct: 416 CSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSM 468
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 26/294 (8%)
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
S R FD + + AL+ G + FE ++ F M + PD +T+ VL + A
Sbjct: 93 SIFRCFDH---PNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVA 149
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF----QRMHKRTLV 282
+ +G+G +H V+K + + V +L+D+Y + G + F Q+F QR +++
Sbjct: 150 ALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESIL 209
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
WN +I G G + +A F +M + + S+ + G ++ F M
Sbjct: 210 LWNVLINGCCKVGDLSKAASLFEAMPER----NAGSWNSLINGFVRNGDLDRARELFVQM 265
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGD 399
+ VS + +++ +S+ G E AL++ M ++PN++ + S L AC G
Sbjct: 266 PEKNVVS-----WTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGA 320
Query: 400 IILAERLMKYL----VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+ + ER+ YL L+ G+ + L +MYA G A ++ KG+ +
Sbjct: 321 LQVGERIHNYLSSNGFQLNRGIGTA---LVDMYAKCGNIKSASRVFVETKGKDL 371
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/460 (38%), Positives = 266/460 (57%), Gaps = 5/460 (1%)
Query: 41 TVNPTVQ-WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
T NP V +T+ I SG +A ++RM P++ ++L C L
Sbjct: 107 THNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGS--QLALR 164
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
G +H KLGL N +V ++++Y K G + A VF+ M + MI Y
Sbjct: 165 EGREVHSRALKLGLSSNR-LVRLRIMELYGKCGELGDARRVFEEM-PEDVVASTVMISSY 222
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+G +E A +F + +D + WTA+++GFV+ ALE FR MQ V P+ TI+
Sbjct: 223 SDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIV 282
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
VL+AC+ +G L IG W+H Y+ K + + N+ V N LI++YSRCG I+ A+ VF M R
Sbjct: 283 CVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDR 342
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
++++N++I G ++NG +A+E F M +P V+F G L ACSH GL++ G + F
Sbjct: 343 DVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIF 402
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M + Y V P+IEHYGC+VDL R GRLE+A +++ M M P+ ++LG+LL+AC+ +
Sbjct: 403 HSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKN 462
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E++ K L D YVLL+++YA+ GKW A ++R MK G+QK+PG SSIE
Sbjct: 463 LELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIE 522
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+ + IHEF+ GD H E IY LE L+ L+L GY PE
Sbjct: 523 VNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPE 562
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 143/348 (41%), Gaps = 69/348 (19%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A R+F + +TAL++GFV G + +A++ + M + PD + S+L A
Sbjct: 97 IDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKA 156
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ---------- 274
C + L G +H LK N V +++LY +CG + AR+VF+
Sbjct: 157 CGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAST 216
Query: 275 --------------------RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
R+ ++ V W ++I GF N + ALE F MQ E +P
Sbjct: 217 VMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRP 276
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
+ + L+ACS G +E G M+K + + + ++++YSR G +++A V
Sbjct: 277 NEFTIVCVLSACSQLGALEIGRWVHSYMRK-FEIELNLFVGNALINMYSRCGSIDEAQTV 335
Query: 375 VENMP----------------------------------MKPNEVVLGSLLAACRTKGDI 400
+ M ++P V +L AC G +
Sbjct: 336 FDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLV 395
Query: 401 ILAERLMKYLVDLDPGVD---SNYVLLANMYAAVGKWDGAGKIRRTMK 445
++ + D GV+ +Y + ++ VG+ + A + RTMK
Sbjct: 396 DFGFKIFHSMTR-DYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMK 442
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 4/166 (2%)
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
D IIS+L ++ + L IH +++ + + L+ S+C I++A ++F
Sbjct: 48 DQKQIISLLQRSKHINQV---LPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIF 104
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
Q H + + ++I GF +G +A++ ++ M + PD L AC +
Sbjct: 105 QYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALR 164
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
+G K+ S R+ I++LY + G L DA V E MP
Sbjct: 165 EGREVHSRALKLGLSSNRLVRLR-IMELYGKCGELGDARRVFEEMP 209
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/454 (36%), Positives = 260/454 (57%), Gaps = 4/454 (0%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W S I + ++G EA F +M L+G P+ + ++LS C G +H
Sbjct: 548 WNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQK--GRELHNF 605
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ + ++ ++ L+DMYAK G MD A V+D K N M+ ++ G
Sbjct: 606 IVRNTMEEEGIL-QVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRAND 664
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +FD+M R+ W ++L G+ +G +E+ F EM S +E D +T+++++N C++
Sbjct: 665 AKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSS 724
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNT-LIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ L G +H ++K+ F + V T L+D+YS+CG I AR VF M+ + +VSWN+
Sbjct: 725 LPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNA 784
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I G++ +G EAL + M K+G P+ V+F L+ACSH GL+E+GLR F M++ Y
Sbjct: 785 MISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDY 844
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+ + EHY C+VDL RAGRLEDA VE MP++P G+LL ACR D+ +
Sbjct: 845 NIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLA 904
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHE 466
+ L +LDP YV+++N+YAA G+W IR+ MK +G++K PG+S IEI S I
Sbjct: 905 AQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQI 964
Query: 467 FMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F AG ++H ++E IY+ L L+ K GY+P+T
Sbjct: 965 FHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDT 998
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 170/355 (47%), Gaps = 50/355 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLL---SGCADFPSQCLFLGA 102
V W S IS + G +A + F RM G N ++L +G AD G
Sbjct: 343 VTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGK-----GR 397
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+HG + + L +++++G+AL+DMY+K G ++ A VF ++ ++ ++NA++ GY++
Sbjct: 398 ELHGHLVR-NLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQE 456
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G E A+ ++ +M D G++PD T ++L
Sbjct: 457 GKAEEALELYHDMQSED------------------------------GIQPDQFTFTTLL 486
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
CAN G IH ++++ + N+ V L+ +YS CG + +A+++F RM +R
Sbjct: 487 TLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAY 546
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWNS+I G+ NG EAL F MQ G KPD S + L++C + G + +
Sbjct: 547 SWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFI 606
Query: 343 KKIYRVSPRIEHYG----CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
V +E G +VD+Y++ G ++ A V + K +V+L +++ +
Sbjct: 607 -----VRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKK--DVILNNVMVS 654
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 217/467 (46%), Gaps = 77/467 (16%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I+ + + EA F RM G P++ TF + L C S+ G +H
Sbjct: 242 VTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSR--DGGKQVH 299
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ G + +F NA+ID Y + D
Sbjct: 300 SKLIACGFKGD--------------------------------TFVGNALIDMYAKCDDE 327
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
ES +++FDEM R+ ++W ++++ + G+F +AL F MQ SG + + + S+L A
Sbjct: 328 ESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMAS 387
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A + +G G +H ++++ ++ + + L+D+YS+CG +E A QVF+ + +R VS+N
Sbjct: 388 AGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYN 447
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKE-GFKPDGVSFTGALTACS-----------HAGLIE 333
+++ G+ G EALE ++ MQ E G +PD +FT LT C+ HA LI
Sbjct: 448 ALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIR 507
Query: 334 DGLRY-----------------FDIMKKIY-RVSPRIEH-YGCIVDLYSRAGRLEDALNV 374
+ + K+I+ R++ R + + +++ Y + G ++AL +
Sbjct: 508 ANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRL 567
Query: 375 VENMPM---KPNEVVLGSLLAACRTKGDIILAERLMKYLVD---LDPGVDSNYVLLANMY 428
+ M + KP+ L S+L++C + D L ++V + G+ V+L +MY
Sbjct: 568 FKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ--VVLVDMY 625
Query: 429 AAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
A G D A K+ + I+K L+++ + + ++ A D ++
Sbjct: 626 AKCGSMDYAWKVY----DQTIKKDVILNNVMVSAFVNSGRANDAKNL 668
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 188/400 (47%), Gaps = 73/400 (18%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTR--MTLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V + + ++ + + G+ AE ALE + G P+ TF TLL+ CA+ + G
Sbjct: 444 VSYNALLAGYVQEGK-AEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQ--GRQ 500
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH + + + +N ++V T L+ MY++ GR++ A +F+ M +++++WN+MI+GY + G
Sbjct: 501 IHAHLIRANITKN-IIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNG 559
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+ + A+R+ F++MQ++G++PD ++ S+L+
Sbjct: 560 ETQEALRL-------------------------------FKQMQLNGIKPDCFSLSSMLS 588
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF--------------- 268
+C ++ G +H ++++ ++ + L+D+Y++CG +++
Sbjct: 589 SCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVIL 648
Query: 269 ----------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
A+ +F +M +R WNSI+ G+A G E+ +F M +
Sbjct: 649 NNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDI 708
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
+ D ++ + CS +E G + ++ K V+ + +VD+YS+ G + A
Sbjct: 709 EYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKAR 768
Query: 373 NVVENMPMKP----NEVVLGSLLAACRTKGDIILAERLMK 408
V +NM K N ++ G C +K +IL E + K
Sbjct: 769 TVFDNMNGKNIVSWNAMISGYSKHGC-SKEALILYEEMPK 807
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 160/355 (45%), Gaps = 44/355 (12%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM--IH 105
W + I + R E + RM G + TF +++ C +G + +
Sbjct: 143 WNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMED----MGGVRQLQ 198
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V K GL+ N+ VG AL+D YA+FG MD A D + S TWNA+I GY++
Sbjct: 199 SSVVKAGLN-CNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVK---- 253
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+SW EEA F M GV PD T S L C
Sbjct: 254 --------------ILSW-------------EEAWGIFDRMLKIGVCPDNFTFASALRVC 286
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ + G +H ++ FK + V N LID+Y++C E +VF M +R V+WN
Sbjct: 287 GALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWN 346
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
SII A G +AL F MQ+ G+K + + L A AGL + G + ++ +
Sbjct: 347 SIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMAS--AGLADIG-KGRELHGHL 403
Query: 346 YR--VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
R ++ I +VD+YS+ G +E+A V ++ ++ NEV +LLA +G
Sbjct: 404 VRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSL-LERNEVSYNALLAGYVQEG 457
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 187/446 (41%), Gaps = 54/446 (12%)
Query: 72 TLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF 131
T ++ N + + +L+ C D S G IH + G + + ++ T +L +YA+
Sbjct: 63 TKPASDVNPLPYSSLIQDCID--SNSFQRGKSIHTQMISNGYNPDAYLM-TKILMLYARS 119
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
G +D D+ A ++F+EMP R+ +W ++ +
Sbjct: 120 GCLD----------------------------DLCYARKLFEEMPERNLTAWNTMILAYA 151
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
+ + E L + M+ SG D T SV+ AC + +G + V+K N+
Sbjct: 152 RVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLF 211
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
V L+D Y+R G ++ A + ++V+WN++I G+ EA F+ M K G
Sbjct: 212 VGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIG 271
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG------CIVDLYSRA 365
PD +F AL C LR D K+++ G ++D+Y++
Sbjct: 272 VCPDNFTFASALRVCG-------ALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKC 324
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLA 425
E L V + M + N+V S+++A G + L+ +L + G SN L
Sbjct: 325 DDEESCLKVFDEMGER-NQVTWNSIISAEAQFGH--FNDALVLFLRMQESGYKSNRFNLG 381
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEH--IYSM 483
++ A GK R + G ++ S I +GS + + M +E H S+
Sbjct: 382 SILMASAGLADIGK-GRELHGHLVRNLLN-SDIILGSALVD-MYSKCGMVEEAHQVFRSL 438
Query: 484 LEL--LSFDLKLCGYVPETVAGELYE 507
LE +S++ L GYV E A E E
Sbjct: 439 LERNEVSYNALLAGYVQEGKAEEALE 464
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 18/179 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + IS + + G EA + + M G PN +TF+ +LS C+ G +
Sbjct: 780 VSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACS-------HTGLVEE 832
Query: 106 GLVCKLGLDRN-NVMVG----TALLDMYAKFGRMDLATVVFDAMRVKSSF-TWNAMIDGY 159
GL + + N+ T ++D+ + GR++ A + M ++ TW A++
Sbjct: 833 GLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGAC 892
Query: 160 MRRGDIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
D++ +A R+F E+ ++ + + N + G ++E + + M++ GV+ D
Sbjct: 893 RVHKDMDMGRLAAQRLF-ELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKD 950
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 163/459 (35%), Positives = 265/459 (57%), Gaps = 7/459 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL-GAMI 104
V W + IS + SG EA F RM L + TF ++LS CA+ LF G +
Sbjct: 260 VVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVG---LFAHGKSV 316
Query: 105 HGLVCKLG---LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
HG + +L + + V AL+ Y+K G + +A +FD M +K +WN ++ GY+
Sbjct: 317 HGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVE 376
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
++ AV +F+EMP ++ +SW +++G+V G+ E+AL+ F +M+ V+P T
Sbjct: 377 SSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGA 436
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
+ AC +G L G +H ++++ F+ + N LI +Y+RCG ++ A +F M
Sbjct: 437 IAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDS 496
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSWN++I +G EALE F+ M EG PD +SF LTAC+H+GL+++G RYF+
Sbjct: 497 VSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFES 556
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
MK+ + + P +HY ++DL RAGR+ +A ++++ MP +P + ++L+ CRT GD+
Sbjct: 557 MKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDME 616
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
L L + P D Y+LL+N Y+A G W A ++R+ M+ RG++K+PG S IE G
Sbjct: 617 LGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAG 676
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ +H F+ GD H E+ +Y LE++ ++ GYVP+T
Sbjct: 677 NKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDT 715
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 206/475 (43%), Gaps = 77/475 (16%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAM 103
TV + IS + R+ A A F + G+ P+ +F LLS P+ + A
Sbjct: 121 TVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQ 180
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL---ATVVFDAMRVKSSFTWNAMIDGYM 160
+H V K G + V AL+ +Y K + A V D M K TW M+ GY+
Sbjct: 181 LHCSVLKSGAG-GALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYV 239
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
RRGD+ +A +F+E+ + + W A+++G+V G EA E FR M + V D T S
Sbjct: 240 RRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTS 299
Query: 221 VLNACANVGTLGIGLWIHRYV--LKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
VL+ACANVG G +H + L+ +F + + V N L+ YS+CG I AR++F M
Sbjct: 300 VLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNM 359
Query: 277 HKRTLVSWNSIIVGFAVN-------------------------------GFVGEALEYFN 305
+ +VSWN+I+ G+ + GF +AL+ FN
Sbjct: 360 TLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFN 419
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI-------------------- 345
M+ E KP ++ GA+ AC G ++ G + + ++
Sbjct: 420 KMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCG 479
Query: 346 --------YRVSPRIE--HYGCIVDLYSRAGRLEDALNVVENMPMK---PNEVVLGSLLA 392
+ V P I+ + ++ + G +AL + + M + P+ + ++L
Sbjct: 480 AVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLT 539
Query: 393 ACRTKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
AC G + R MK + PG D +Y L ++ G+ A + +TM
Sbjct: 540 ACNHSGLVDEGFRYFESMKRDFGIIPGED-HYTRLIDLLGRAGRIGEARDLIKTM 593
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 158/376 (42%), Gaps = 62/376 (16%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV--RDAI 181
L+ +Y + A +F A S T +++ Y + +AV FD +P RD +
Sbjct: 65 LIHLYTLSRDLPAAATLFCADPCPVSAT--SLVAAYAAADRLPAAVSFFDAVPPARRDTV 122
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIG--LWIH 238
A+++ + + + A+ FR + SG + PD + ++L+A ++ + + +H
Sbjct: 123 LHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLH 182
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRC----------------------------------G 264
VLK + VCN L+ LY +C G
Sbjct: 183 CSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRG 242
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
+ AR VF+ + + V WN++I G+ +G EA E F M E D +FT L+
Sbjct: 243 DVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLS 302
Query: 325 ACSHAGLIEDGLRYFDIMKKIYRVSPR------IEHYGCIVDLYSRAGRLEDALNVVENM 378
AC++ GL G + +I R+ P + +V YS+ G + A + +NM
Sbjct: 303 ACANVGLFAHGK---SVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNM 359
Query: 379 PMKP----NEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
+K N ++ G + ++C K + E M Y +L +++++ + Y G
Sbjct: 360 TLKDVVSWNTILSGYVESSCLDKAVEVFEE--MPYKNEL------SWMVMVSGYVHGGFA 411
Query: 435 DGAGKIRRTMKGRGIQ 450
+ A K+ M+ ++
Sbjct: 412 EDALKLFNKMRSENVK 427
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W + IS + G EA F RM G P+ I+F+T+L+ C G +
Sbjct: 496 SVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHS-------GLVD 548
Query: 105 HGLVCKLGLDRN-NVMVG----TALLDMYAKFGRMDLATVVFDAMRVKSSFT-WNAMIDG 158
G + R+ ++ G T L+D+ + GR+ A + M + + + W A++ G
Sbjct: 549 EGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSG 608
Query: 159 YMRRGDIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
GD+E +A ++F P D ++ L N + G + +A + M+ GV+ +
Sbjct: 609 CRTSGDMELGAHAADQLFKMTPQHDG-TYILLSNTYSAAGCWVDAARVRKLMRDRGVKKE 667
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/451 (38%), Positives = 273/451 (60%), Gaps = 9/451 (1%)
Query: 43 NPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHG-TNPNHITFITLLSGCA--DFPSQCL 98
NP + W + I RS + + M L P +T+ ++ A D S+
Sbjct: 83 NPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDLASE-- 140
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
GA +HG + KLGL+ N+ + +L MY G A VFD WN MI G
Sbjct: 141 --GAQLHGKMIKLGLE-NDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMG 197
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+ G ++ + R+FD+M +R+A+SW ++++G+V+ G F +ALE F++MQ+ +EP T+
Sbjct: 198 VAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTM 257
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+S+LNACA +G + G WIH Y++K+ F+ N V +ID+YS+CG I+ A QVFQ +
Sbjct: 258 VSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPR 317
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R L WNS+I+G A+NG EAL+ F+ +Q +PD VSF LTAC H G+++ Y
Sbjct: 318 RGLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDY 377
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F +M+ Y++ P I+H+ C+VD+ RAG LE+A ++ +M + P+ ++ GSLL +C G
Sbjct: 378 FLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWGSLLWSCCKYG 437
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
+I +A+R +L++L+P S++VL+AN YAA ++ A K R T+K I K+PG S I
Sbjct: 438 NIKMAKRAANHLIELNPSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKEPGCSCI 497
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSF 489
E+G +HEF+AG R+H E + IY +L++L+
Sbjct: 498 EVGGEVHEFVAGGRAHPEIKEIYRVLDVLTL 528
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 142/295 (48%), Gaps = 16/295 (5%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH + K GL ++ L + G ++ A +VF ++ + F WN +I G+ R
Sbjct: 41 IHSQLIKTGLAKDTNAASRILAFCASPAGDINYAYLVFVQIQNPNIFAWNTIIRGFSRSS 100
Query: 164 DIESAVRMFDEM----PVR-DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
++++ ++ +M PV+ +++ ++ F + E + +M G+E D
Sbjct: 101 VPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDLASEGAQLHGKMIKLGLENDSFIR 160
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
++L N G R V + ++ NT+I ++CG ++ +R++F +M
Sbjct: 161 NTILFMYVNCGFTSEA----RKVFDRGMDFDIVAWNTMIMGVAKCGLVDESRRLFDKMSL 216
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R VSWNS+I G+ NG +ALE F MQ E +P + L AC+ G I G
Sbjct: 217 RNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLLNACACLGAIRQGEWI 276
Query: 339 FDIM-KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLG 388
D M KK + ++P + I+D+YS+ G ++ A+ V ++ P + N ++LG
Sbjct: 277 HDYMVKKKFELNPIV--VTAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSMILG 329
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 113/255 (44%), Gaps = 42/255 (16%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K ++ V W S IS + R+GR +A F +M + P+ T ++LL+ CA + +
Sbjct: 213 KMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLLNACACLGA--I 270
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G IH + K + N ++V TA++DMY+K G +D A VF + + WN+MI
Sbjct: 271 RQGEWIHDYMVKKKFELNPIVV-TAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSMI-- 327
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
G G EAL+ F +Q S + PD V+
Sbjct: 328 -----------------------------LGLAMNGQENEALQLFSVLQSSDLRPDDVSF 358
Query: 219 ISVLNACANVGTLGIGLWIHRYVL----KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
I+VL AC + G + Y L K K +K + ++D+ R G +E A ++ +
Sbjct: 359 IAVLTACDHTGMVDKA---KDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIR 415
Query: 275 RMH-KRTLVSWNSII 288
MH + W S++
Sbjct: 416 SMHVDPDAIIWGSLL 430
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/354 (46%), Positives = 225/354 (63%), Gaps = 3/354 (0%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVR--DAISWTALLNGFVKRGYFEEALECFREMQ 207
F N+++ Y G ESA ++FDEMPVR + +SW ++LN F G E L F EM
Sbjct: 152 FVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEML 211
Query: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267
PD TI+SVL ACA G L +G +H YV K +N V N LIDLY++CG +
Sbjct: 212 GVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVN 271
Query: 268 FARQVFQRMH-KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
AR++F+ M RT+VSW S+IVG A NGF EALE F+ M++E P ++ G L AC
Sbjct: 272 DARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYAC 331
Query: 327 SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVV 386
SH GL++DG RYFD MK+ Y +SPRIEH GC+VDL RAGR+E+A + + MP++PN VV
Sbjct: 332 SHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVV 391
Query: 387 LGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKG 446
+LL +C + L + + LV+LDPG +YVLL+N+YAAVG W +R+TM
Sbjct: 392 WRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVK 451
Query: 447 RGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
++K PG S +E+ + ++EF+ GDRSH ESE IY ML ++ L+ GY+P T
Sbjct: 452 DRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRT 505
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 87/188 (46%), Gaps = 3/188 (1%)
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD T ++ ACA + L G +H K F V V N+L+ LY CG E A +V
Sbjct: 114 PDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKV 173
Query: 273 FQRM--HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
F M R LVSWNS++ FA NG E L F M F PDG + LTAC+ G
Sbjct: 174 FDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFG 233
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
+ G R ++K+ V ++DLY++ G + DA + E M + V SL
Sbjct: 234 ALALGRRVHVYVEKVGLVE-NSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSL 292
Query: 391 LAACRTKG 398
+ G
Sbjct: 293 IVGLAANG 300
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 42/229 (18%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S ++ +GR E F M P+ T +++L+ CA+F + L LG +H
Sbjct: 185 VSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGA--LALGRRVH 242
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V K+GL N+ V AL+D+YAK G ++ DA R+
Sbjct: 243 VYVEKVGLVENS-HVSNALIDLYAKCGSVN------DARRI------------------- 276
Query: 166 ESAVRMFDEMPV-RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
F+EM + R +SWT+L+ G G+ +EALE F M+ + P +T++ VL A
Sbjct: 277 ------FEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYA 330
Query: 225 CANVGTLGIGLWIHRYV--LKQDF--KDNVKVCNTLIDLYSRCGCIEFA 269
C++ G + G RY +K+D+ ++ ++DL R G +E A
Sbjct: 331 CSHCGLVDDGF---RYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEA 376
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/456 (36%), Positives = 258/456 (56%), Gaps = 34/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ I+ + SG EA F ++ G P+ + + +L+ CA C G I
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARL-GDCTS-GEWI 237
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ G+ RN V V T+LLDMY K G+
Sbjct: 238 DRYISDSGMGRN-VFVATSLLDMYVKC-------------------------------GN 265
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A +F MP +D +SW+ ++ G+ G ++AL+ F +MQ ++PD T++ VL+A
Sbjct: 266 LERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSA 325
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA +G L +G+W + + +F N + LID+YS+CG + A ++F M K+ V W
Sbjct: 326 CATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVW 385
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+++VG ++NG F+ ++K G +PD +F G L C+H G + +G ++F+ MK+
Sbjct: 386 NAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKR 445
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
++ ++P IEHYGC+VDL RAG L +A ++ NMPMKPN VV G+LL C+ D LAE
Sbjct: 446 VFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAE 505
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+++K L++L+P NYV L+N+Y+ +W+ A KIR TMK + IQK S IEI +
Sbjct: 506 QVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIV 565
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF+ GD+SH SE IY+ L+ L +LK G+VP T
Sbjct: 566 HEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTT 601
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 165/324 (50%), Gaps = 36/324 (11%)
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
G PN+ T +L CA + LG IH L+ K G D ++V V T+LL +Y K
Sbjct: 109 GFLPNNFTIPFVLKACAR--KLDVRLGLKIHSLLVKAGYD-HDVFVKTSLLSLYVKCDNF 165
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
D A+++FD++P ++ +SWTA++ G++ G
Sbjct: 166 D-------------------------------DALKVFDDIPDKNVVSWTAIITGYISSG 194
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
+F EA+ F+++ G++PD +++ VL ACA +G G WI RY+ NV V
Sbjct: 195 HFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVAT 254
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
+L+D+Y +CG +E A +F M ++ +VSW+++I G+A NG +AL+ F MQ E KP
Sbjct: 255 SLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKP 314
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
D + G L+AC+ G ++ G+ +M + +S + ++D+YS+ G + A +
Sbjct: 315 DCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTA-LIDMYSKCGSVTQAWEI 373
Query: 375 VENMPMKPNEVVLGSLLAACRTKG 398
M K + VV +++ G
Sbjct: 374 FTAMK-KKDRVVWNAMMVGLSMNG 396
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 123/278 (44%), Gaps = 33/278 (11%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH + +L LD++N ++ +L FG + + +VF ++ + F WN MI
Sbjct: 35 IHARLLRLHLDQDNYLL-NLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMI------- 86
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
G V + F++A+ + M+ G P+ TI VL
Sbjct: 87 ------------------------RGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLK 122
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA + +GL IH ++K + +V V +L+ LY +C + A +VF + + +VS
Sbjct: 123 ACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVS 182
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W +II G+ +G EA+ F + + G KPD S L AC+ G G + D
Sbjct: 183 WTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG-EWIDRYI 241
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ + ++D+Y + G LE A + MP K
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEK 279
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 100/249 (40%), Gaps = 38/249 (15%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
IH +L+ + + N ++ G +++ VF ++ + + WN++I G
Sbjct: 35 IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDC 94
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLRY------- 338
+A+ + SM+ GF P+ + L AC+ H+ L++ G +
Sbjct: 95 FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTS 154
Query: 339 ----------FDIMKKIYRVSP--RIEHYGCIVDLYSRAGRLEDALNVVEN---MPMKPN 383
FD K++ P + + I+ Y +G +A+ + M +KP+
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKI 440
L +LAAC GD E + +Y+ D G+ N + L +MY G + A I
Sbjct: 215 SFSLVKVLAACARLGDCTSGEWIDRYIS--DSGMGRNVFVATSLLDMYVKCGNLERANLI 272
Query: 441 RRTMKGRGI 449
M + I
Sbjct: 273 FSAMPEKDI 281
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/459 (37%), Positives = 269/459 (58%), Gaps = 14/459 (3%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADF--PSQCLFLGA 102
V W + S + + EA F +M G P+ T++ +S C+ P+ +
Sbjct: 223 VVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILR 282
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM-RVKSSFTWNAMIDGYMR 161
MI L N V TALLDM+AKFG +++A +FD + +++ TWN MI Y R
Sbjct: 283 MIDQKHIVL-----NSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTR 337
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIIS 220
G + A +FD MP RD +SW +++ G+ + G ++E F+EM ++PD VTI S
Sbjct: 338 VGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIAS 397
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VL+AC ++G L + W+ V +++ K + N+LI +YS+CG + A ++FQ M R
Sbjct: 398 VLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRD 457
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+VS+N++I GFA NG EA++ +M++EG +PD V++ G LTACSHAGL+ +G F
Sbjct: 458 VVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFK 517
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
++ +P ++HY C+VDL RAG L++A ++++MPMKP+ V GSLL A R +
Sbjct: 518 SIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRV 572
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E L +L+P NYVLL+N+YA+ G+W+ ++R MK G++K G+S +E
Sbjct: 573 GLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEY 632
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+H+F GDRSH +S+ IY +L L +K G+V +
Sbjct: 633 KGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVAD 671
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 158/342 (46%), Gaps = 66/342 (19%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL------------------------ 136
G M H V KLG ++ + A+LDMYAK G++DL
Sbjct: 114 GNMFHAYVLKLG-HIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCW 172
Query: 137 -------ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
A V+F+ M ++ TW +M+ GY + GD+ESA R FDEMP R +SW A+ +
Sbjct: 173 KSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSA 232
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF--- 246
+ ++ +EAL F +M G+ PD T + +++C+++G + I R + ++
Sbjct: 233 YAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLN 292
Query: 247 -----------------------------KDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+ N N +I Y+R G + AR++F M
Sbjct: 293 SFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMP 352
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTACSHAGLIEDGL 336
KR +VSWNS+I G+A NG ++E F M +PD V+ L+AC H G ++
Sbjct: 353 KRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSY 412
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
DI+++ + I + ++ +YS+ G + DA + + M
Sbjct: 413 WVLDIVRE-KNIKLGISGFNSLIFMYSKCGSVADAHRIFQTM 453
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/459 (37%), Positives = 269/459 (58%), Gaps = 14/459 (3%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADF--PSQCLFLGA 102
V W + S + + EA F +M G P+ T++ +S C+ P+ +
Sbjct: 223 VVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILR 282
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM-RVKSSFTWNAMIDGYMR 161
MI L N V TALLDM+AKFG +++A +FD + +++ TWN MI Y R
Sbjct: 283 MIDQKHIVL-----NSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTR 337
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIIS 220
G + A +FD MP RD +SW +++ G+ + G ++E F+EM ++PD VTI S
Sbjct: 338 VGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIAS 397
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VL+AC ++G L + W+ V +++ K + N+LI +YS+CG + A ++FQ M R
Sbjct: 398 VLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRD 457
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+VS+N++I GFA NG EA++ +M++EG +PD V++ G LTACSHAGL+ +G F
Sbjct: 458 VVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFK 517
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
++ +P ++HY C+VDL RAG L++A ++++MPMKP+ V GSLL A R +
Sbjct: 518 SIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRV 572
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E L +L+P NYVLL+N+YA+ G+W+ ++R MK G++K G+S +E
Sbjct: 573 GLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEY 632
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+H+F GDRSH +S+ IY +L L +K G+V +
Sbjct: 633 KGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVAD 671
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 158/342 (46%), Gaps = 66/342 (19%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL------------------------ 136
G + H V KLG ++ + A+LDMYAK G++DL
Sbjct: 114 GNLFHAYVLKLG-HIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCW 172
Query: 137 -------ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
A V+F+ M ++ TW +M+ GY + GD+ESA R FDEMP R +SW A+ +
Sbjct: 173 KSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSA 232
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF--- 246
+ ++ +EAL F +M G+ PD T + +++C+++G + I R + ++
Sbjct: 233 YAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLN 292
Query: 247 -----------------------------KDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+ N N +I Y+R G + AR++F M
Sbjct: 293 SFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMP 352
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTACSHAGLIEDGL 336
KR +VSWNS+I G+A NG ++E F M +PD V+ L+AC H G ++
Sbjct: 353 KRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSY 412
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
DI+++ + I + ++ +YS+ G + DA + + M
Sbjct: 413 WVLDIVRE-KNIKLGISGFNSLIFMYSKCGSVADAHRIFQTM 453
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/449 (37%), Positives = 259/449 (57%), Gaps = 3/449 (0%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S V V W I+ + + G +A + M G P+ +T I L+S C+ L
Sbjct: 216 ESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGD--L 273
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G + V + GL R + + AL+DM++K G + A +FD + ++ +W MI G
Sbjct: 274 NRGKEFYEYVKENGL-RMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISG 332
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y R G ++ + ++FD+M +D + W A++ G V+ ++AL F+EMQ S +PD +T+
Sbjct: 333 YARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
I L+AC+ +G L +G+WIHRY+ K NV + +L+D+Y++CG I A VF +
Sbjct: 393 IHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT 452
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R +++ +II G A++G A+ YFN M G PD ++F G L+AC H G+I+ G Y
Sbjct: 453 RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDY 512
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F MK + ++P+++HY +VDL RAG LE+A ++E+MPM+ + V G+LL CR G
Sbjct: 513 FSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHG 572
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ L E+ K L++LDP YVLL MY W+ A + RR M RG++K PG SSI
Sbjct: 573 NVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSI 632
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELL 487
E+ + EF+ D+S ESE IY L L
Sbjct: 633 EVNGIVCEFIVRDKSRPESEKIYDRLHCL 661
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 186/409 (45%), Gaps = 71/409 (17%)
Query: 39 KSTVNPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHG---TNPNHITFITLLSGCADFP 94
K NP + W +I S E+ L + +M HG + P+H T+ L CAD
Sbjct: 111 KGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADL- 169
Query: 95 SQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNA 154
+ LG MI G V KL L+ + V A + M+A G M+ A VFD V+ +WN
Sbjct: 170 -RLSSLGHMILGHVLKLRLELVS-HVHNASIHMFASCGDMENARKVFDESPVRDLVSWNC 227
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+I+GY + G+ E A+ + ++ M+ GV+PD
Sbjct: 228 LINGYKKIGEAEKAIYV-------------------------------YKLMESEGVKPD 256
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
VT+I ++++C+ +G L G + YV + + + + N L+D++S+CG I AR++F
Sbjct: 257 DVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFD 316
Query: 275 RMHKRTLVSWNSIIVGFAV----------------------NGFVG---------EALEY 303
+ KRT+VSW ++I G+A N +G +AL
Sbjct: 317 NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALAL 376
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F MQ KPD ++ L+ACS G ++ G+ ++K Y +S + +VD+Y+
Sbjct: 377 FQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLNVALGTSLVDMYA 435
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD 412
+ G + +AL+V + + N + +++ GD A ++D
Sbjct: 436 KCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTAISYFNEMID 483
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 111/220 (50%), Gaps = 4/220 (1%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV---EPDYVTIISV 221
++ +V++ + + SW + GF + +E+ +++M G PD+ T +
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
CA++ +G I +VLK + V N I +++ CG +E AR+VF R L
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSWN +I G+ G +A+ + M+ EG KPD V+ G +++CS G + G +++
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+K+ + I ++D++S+ G + +A + +N+ +
Sbjct: 283 VKE-NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR 321
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/456 (36%), Positives = 259/456 (56%), Gaps = 34/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + ++ + ++G E F M G + +T +++++ C LG +
Sbjct: 186 VVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDA--KLGKWV 243
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
G V + GL RN +V TAL+DMYAK G +
Sbjct: 244 AGHVDEEGLARNPKLV-TALMDMYAKCG-------------------------------E 271
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I A R+FD M RD ++W+A+++G+ + EAL F EMQ++ VEP+ VT++SVL+A
Sbjct: 272 IGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSA 331
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA +G L G W+H YV ++ + L+D Y++CGCI+ A + F+ M + +W
Sbjct: 332 CAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTW 391
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G A NG EALE F+SM++ G +P V+F G L ACSH+ L+E+G R+FD M +
Sbjct: 392 TALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMAR 451
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + PR+EHYGC+VDL RAG +++A + MP++PN V+ +LL++C ++ + E
Sbjct: 452 DYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGE 511
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+K ++ L+P +YVLL+N+YA+ G+W A +R+ MK RGI+K PG S IE+ +
Sbjct: 512 EALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVV 571
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
EF A D H E IY +E + +K+ GYVP T
Sbjct: 572 FEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNT 607
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 134/253 (52%), Gaps = 2/253 (0%)
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
V F +++I Y GD+ +A +FD + W A++ ++K G + E +E F+
Sbjct: 152 VADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKG 211
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
M GV D VT++SV+ AC +G +G W+ +V ++ N K+ L+D+Y++CG
Sbjct: 212 MLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGE 271
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
I AR++F M R +V+W+++I G+ EAL F+ MQ +P+ V+ L+A
Sbjct: 272 IGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSA 331
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
C+ G +E G ++ + R+S +VD Y++ G ++DA+ E+MP+K N
Sbjct: 332 CAVLGALETG-KWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVK-NSW 389
Query: 386 VLGSLLAACRTKG 398
+L+ T G
Sbjct: 390 TWTALIKGMATNG 402
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 45/268 (16%)
Query: 183 WTALLNGFVKRGYFEEALECFREM--QISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
+ L+ F+ G+ E+AL F EM S D T L +C+ + L +G + Y
Sbjct: 86 YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
+K+ + V ++LI +Y+ CG + AR VF + +V WN+I+ + NG E
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAG-----------LIEDGL------------- 336
+E F M + G D V+ +TAC G + E+GL
Sbjct: 206 VEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDM 265
Query: 337 -----------RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM---KP 382
R FD M+ S + + ++ Y++A + +AL + M + +P
Sbjct: 266 YAKCGEIGKARRLFDGMQ-----SRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEP 320
Query: 383 NEVVLGSLLAACRTKGDIILAERLMKYL 410
N+V + S+L+AC G + + + Y+
Sbjct: 321 NDVTMVSVLSACAVLGALETGKWVHSYV 348
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 251/391 (64%), Gaps = 1/391 (0%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +HG+V K GL+ ++ + T +L MY G + A +F M WN+MI G+
Sbjct: 145 GRQLHGMVIKEGLEDDSFIRNT-MLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFA 203
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G I+ A +FDEMP R+ +SW ++++GFV+ G F++AL+ FREMQ V+PD T++S
Sbjct: 204 KCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+LNACA +G G WIH Y+++ F+ N V LID+Y +CGCIE VF+ K+
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQ 323
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
L WNS+I+G A NGF A++ F+ +++ G +PD VSF G LTAC+H+G + +F
Sbjct: 324 LSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFR 383
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+MK+ Y + P I+HY +V++ AG LE+A +++NMP++ + V+ SLL+ACR G++
Sbjct: 384 LMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNV 443
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+A+R K L LDP YVLL+N YA+ G ++ A + R MK R ++K+ G SSIE+
Sbjct: 444 EMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEV 503
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
+HEF++ +H +S IYS+L++L++D+
Sbjct: 504 DFEVHEFISCGGTHPKSAEIYSLLDILNWDV 534
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 159/413 (38%), Gaps = 107/413 (25%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH + K GL + V L A M+ A +VF + K+ F WN +I G+ R
Sbjct: 44 IHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSS 103
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
E A+ +F +M V+P +T SV
Sbjct: 104 FPEMAISIFIDMLCSSP-----------------------------SVKPQRLTYPSVFK 134
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC------------------ 265
A +G G +H V+K+ +D+ + NT++ +Y CGC
Sbjct: 135 AYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVA 194
Query: 266 -------------IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
I+ A+ +F M +R VSWNS+I GF NG +AL+ F MQ++
Sbjct: 195 WNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDV 254
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV----DLYSRAGRL 368
KPDG + L AC++ G E G + Y V R E +V D+Y + G +
Sbjct: 255 KPDGFTMVSLLNACAYLGASEQGRWIHE-----YIVRNRFELNSIVVTALIDMYCKCGCI 309
Query: 369 EDALNVVENMPMK----------------------------------PNEVVLGSLLAAC 394
E+ LNV E P K P+ V +L AC
Sbjct: 310 EEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTAC 369
Query: 395 RTKGDIILAE---RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
G++ A+ RLMK ++P + +Y L+ N+ G + A + + M
Sbjct: 370 AHSGEVHRADEFFRLMKEKYMIEPSI-KHYTLMVNVLGGAGLLEEAEALIKNM 421
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 134/308 (43%), Gaps = 51/308 (16%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA--- 102
V W S IS R+GR +A F M P+ T ++LL+ CA +LGA
Sbjct: 224 VSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACA-------YLGASEQ 276
Query: 103 --MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
IH + + + N+++V TAL+DMY K G ++ VF+ K WN+MI G
Sbjct: 277 GRWIHEYIVRNRFELNSIVV-TALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILG-- 333
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G+ E A++ F E++ SG+EPD V+ I
Sbjct: 334 -----------------------------LANNGFEERAMDLFSELERSGLEPDSVSFIG 364
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMH- 277
VL ACA+ G + R ++K+ + + ++K ++++ G +E A + + M
Sbjct: 365 VLTACAHSGEVHRADEFFR-LMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPV 423
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT-ACSHAGLIEDGL 336
+ V W+S++ G V A ++K PD L+ A + GL E+ +
Sbjct: 424 EEDTVIWSSLLSACRKIGNVEMAKRAAKCLKK--LDPDETCGYVLLSNAYASYGLFEEAV 481
Query: 337 RYFDIMKK 344
+MK+
Sbjct: 482 EQRLLMKE 489
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/488 (34%), Positives = 273/488 (55%), Gaps = 23/488 (4%)
Query: 14 FLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTL 73
+L H N + +T +I + T+ SS++ H S +I A + +
Sbjct: 39 YLSHLLNTSSKFASTYAFTIFNHIPNPTLFLYNTLISSLTHH--SDQIHLAFSLYNHILT 96
Query: 74 HGT-NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFG 132
H T PN TF +L CA P L G +H V K + V +LL+ YAK+G
Sbjct: 97 HKTLQPNSFTFPSLFKACASHP--WLQHGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKYG 154
Query: 133 RMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVK 192
++ ++ +FD + TWN M+ Y + S F++ +
Sbjct: 155 KLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSYSTSFEDADMS-------------- 200
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
EAL F +MQ+S ++P+ VT++++++AC+N+G L G W H YVL+ + K N V
Sbjct: 201 ----LEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFV 256
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
L+D+YS+CGC+ A Q+F + R +N++I GFAV+G +ALE + +M+ E
Sbjct: 257 GTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDL 316
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
PDG + + ACSH GL+E+GL F+ MK ++ + P++EHYGC++DL RAGRL++A
Sbjct: 317 VPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAE 376
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
+++MPMKPN ++ SLL A + G++ + E +K+L++L+P NYVLL+NMYA++G
Sbjct: 377 ERLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIG 436
Query: 433 KWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+W+ ++R MK G+ K PG S +EI +HEF+ GD++H S+ IYS + ++ L
Sbjct: 437 RWNDVKRVRMLMKDHGVDKLPGFSLVEINGAMHEFLTGDKAHPFSKEIYSKIGEINRRLL 496
Query: 493 LCGYVPET 500
G+ P T
Sbjct: 497 EYGHKPRT 504
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/453 (36%), Positives = 267/453 (58%), Gaps = 8/453 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I+ + ++G + EA + F M G +P+ +T +++S CA + G +
Sbjct: 217 VVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAAD--REGRQV 274
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K R+++++ AL+DMYAK GR A +FD+M +S + +++ GY + +
Sbjct: 275 HAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSAN 334
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A +F +M ++ I+W L+ + + G EEA+ F +++ + P + T +VLNA
Sbjct: 335 VEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNA 394
Query: 225 CANVGTLGIGLWIHRYVLKQDFK------DNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
C N+ L +G H +VLK+ F+ +V V N+L+D+Y + G I+ +VF+RM
Sbjct: 395 CGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAA 454
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R VSWN++IVG+A NG +AL F M PD V+ G L+AC H+GL+++G RY
Sbjct: 455 RDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRY 514
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M + + ++P +HY C+VDL RAG L++A ++ +MPM+P+ V+ SLL ACR
Sbjct: 515 FHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLHK 574
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ L E L +LDP YVLL+NMYA +GKW ++RR+MK RG+ K+PG S I
Sbjct: 575 NVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSWI 634
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
EIG ++ F+A D+ H I++ L ++ ++
Sbjct: 635 EIGRKMNVFLARDKRHPCRNEIHNTLRIIQMEM 667
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 138/260 (53%), Gaps = 2/260 (0%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
L+ YA+ GR+ A VFD + ++++F++NA++ Y R G + A +F+ +P D S+
Sbjct: 58 LVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSY 117
Query: 184 TALLNGFVK--RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
A++ + RG+ +AL M + + S L+ACA G +H V
Sbjct: 118 NAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLV 177
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
+ D+V + + L+D+Y++C E AR+VF M +R +VSWNS+I + NG VGEAL
Sbjct: 178 ARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEAL 237
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
F M GF PD V+ + ++AC+ +G + M K R+ + +VD+
Sbjct: 238 MLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDM 297
Query: 362 YSRAGRLEDALNVVENMPMK 381
Y++ GR +A + ++MP +
Sbjct: 298 YAKCGRTWEARCIFDSMPSR 317
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/440 (37%), Positives = 259/440 (58%), Gaps = 4/440 (0%)
Query: 55 HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLD 114
+ + G EA M G P+ T + LL C L G +H + + GL
Sbjct: 203 YAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQL--GKSVHAWIERRGLI 260
Query: 115 RN-NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
++ N+++ ALLDMY K + +A +F+ + K + +WN MI GY + G++E A F+
Sbjct: 261 KSSNLILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFE 320
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI 233
+MP RD +SW +++ G+ ++G F M + PD+VTII++++A A +G L
Sbjct: 321 DMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDFVTIINLVSAAAEIGALHH 380
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV 293
G WIH +V++ K + + + ID+Y +CG I+ A VF+ + ++ + W ++I GFA
Sbjct: 381 GRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREVTEKDVTVWTTMITGFAF 440
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE 353
+G+ +AL+ F MQ E P+ V+F LTACSH+G + GLR F+ MK+ Y + P +E
Sbjct: 441 HGYGSKALQLFYEMQ-EYVMPNQVTFVAVLTACSHSGFVSQGLRIFNSMKERYGIEPGVE 499
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
HYGC+VDL R+GR + +V+E MPMKP+ + G++L+ACR G+I +AE K L+ L
Sbjct: 500 HYGCLVDLLGRSGRFSEVKDVIEMMPMKPSRSIWGAVLSACRAYGNIEIAEIAGKELLKL 559
Query: 414 DPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRS 473
+P + YVLL+N+YA G+W + KIR M+ RG++K G SS+ + IHEF+A D+
Sbjct: 560 EPEKEGGYVLLSNIYATSGRWKHSDKIREIMESRGVKKTAGCSSVVVDGIIHEFVAADKR 619
Query: 474 HIESEHIYSMLELLSFDLKL 493
H I S+L L ++KL
Sbjct: 620 HPRWIEIQSILFCLKSEMKL 639
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 151/363 (41%), Gaps = 75/363 (20%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N ++ Y+ + A ++F +M DA+S+ ++ G+ K+G+ EAL+ EM G++
Sbjct: 166 NTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLK 225
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF--KDNVKVCNTLIDLYSRC------- 263
PD T++ +L C +G +G +H ++ ++ N+ + N L+D+Y +C
Sbjct: 226 PDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQ 285
Query: 264 ------------------------GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
G +E A F+ M R LVSWNSII G+A G
Sbjct: 286 SIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLM 345
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GC 357
F +M E PD V+ ++A + G + G R+ I + R+ +I+ +
Sbjct: 346 VQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHG-RW--IHGWVVRMQMKIDAFLGSA 402
Query: 358 IVDLYSRAGRLEDALNVVENMPMK---------------------------------PNE 384
+D+Y + G ++ A V + K PN+
Sbjct: 403 FIDMYWKCGSIKRACMVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQEYVMPNQ 462
Query: 385 VVLGSLLAACRTKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
V ++L AC G + R+ MK ++PGV+ +Y L ++ G++ +
Sbjct: 463 VTFVAVLTACSHSGFVSQGLRIFNSMKERYGIEPGVE-HYGCLVDLLGRSGRFSEVKDVI 521
Query: 442 RTM 444
M
Sbjct: 522 EMM 524
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/464 (36%), Positives = 274/464 (59%), Gaps = 12/464 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WTS IS + RSG EA F M + G + ++S CAD + +IH
Sbjct: 144 VTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGA--FVRAKIIH 201
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
K G + + V +AL+ +Y K G ++ A +F M+ KS +WNA+I + G
Sbjct: 202 EYAVKGGFEEYS-FVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLC 260
Query: 166 ESAVRMFDEMPVR--------DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
+ A+ +F ++ + +SW+A+++GF +G +EALE FR MQ + + + VT
Sbjct: 261 DEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVT 320
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I +VL+ CA + L +G IH +V++ +N+ V N L+++Y++CGC++ +F++
Sbjct: 321 ISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTE 380
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
++ L+SWNS+I G+ ++G ALE F+ M K GFKPDGV+F L++CSH+GL+ +G R
Sbjct: 381 RKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRR 440
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
FD M K YR+ P++EHY C+VDL RAG L +A +V+NMP+ PN V G+LL +CR
Sbjct: 441 LFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALLNSCRMH 500
Query: 398 GDIILAERLMKYLVDLDP-GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
+ +AE +L +L Y+LL+N+YAA G+W+ + ++R + K +G++K PG S
Sbjct: 501 NNTEIAEETASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVRTSAKTKGLKKNPGQS 560
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I++ ++ F AG+ E I+ +LE L+F ++ G V +T
Sbjct: 561 WIKVEKNVYTFSAGNNMQRGFEQIFEILEELTFQMEREGTVHDT 604
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 176/374 (47%), Gaps = 49/374 (13%)
Query: 70 RMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA 129
RM GT + TF ++ CA S LG IHG V ++G ++++ VG L+ MYA
Sbjct: 32 RMRKIGTLGDGFTFPLVIRACAYMGS--FILGKTIHGHVLEMGF-QSHLHVGNELIGMYA 88
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR----DAISWTA 185
K GRM A +FD M V+S +WN M+ Y D A+ +F M + ++WT+
Sbjct: 89 KLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTS 148
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
L++ + + G+ EEA+E F M++ GVE + V++ CA++G IH Y +K
Sbjct: 149 LISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGG 208
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
F++ V + LI +Y + G + A +F M ++L SWN++I A G EALE F+
Sbjct: 209 FEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFS 268
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
+++ G P R+ P + + I+D ++
Sbjct: 269 QLERSGDCP--------------------------------RLRPNVVSWSAIIDGFASK 296
Query: 366 GRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
GR ++AL + M + N V + ++L+ C + L + ++V V N +
Sbjct: 297 GREKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVR---AVMVNNI 353
Query: 423 L----LANMYAAVG 432
L L NMYA G
Sbjct: 354 LVGNGLVNMYAKCG 367
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 82/140 (58%)
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
R M+ G D T V+ ACA +G+ +G IH +VL+ F+ ++ V N LI +Y++
Sbjct: 31 RRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKL 90
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
G + AR +F RM R+ +SWN+++ +A N ALE F M+ EG +P+ V++T +
Sbjct: 91 GRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLI 150
Query: 324 TACSHAGLIEDGLRYFDIMK 343
++ + +G E+ + F +M+
Sbjct: 151 SSYARSGWHEEAMELFGLMR 170
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/461 (36%), Positives = 264/461 (57%), Gaps = 36/461 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + IS + +G EA F M P+ T +T+LS CA S+ + LG
Sbjct: 160 VKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQ--SRSVELG 217
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + G N +V NA+ID Y +
Sbjct: 218 RQVHSWIDDHGFGSNLKIV--------------------------------NALIDLYSK 245
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G +E+A +F+ + +D +SW L+ G+ ++EAL F+EM SG P+ VTI+S+
Sbjct: 246 CGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSI 305
Query: 222 LNACANVGTLGIGLWIHRYVLKQ--DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACA++G + IG WIH Y+ K+ D + + +LID+Y++CG IE A QVF M +
Sbjct: 306 LPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHK 365
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+L SWN++I GFA++G + F+ M+K G +PD ++F G L+ACSH+G ++ G F
Sbjct: 366 SLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIF 425
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M + Y ++P++EHYGC++DL +G ++A +++ MPM+P+ V+ SLL ACR G+
Sbjct: 426 KSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGN 485
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ LAE + L+ ++P +YVLL+N+YA G+WD K+R + G+G++K PG SSIE
Sbjct: 486 LELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIE 545
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I S +HEF+ GD+ H + IY MLE + L+ G+VP+T
Sbjct: 546 IDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDT 586
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 221/436 (50%), Gaps = 44/436 (10%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + + + S A + M G PN TF LL CA S+ G IHG
Sbjct: 34 WNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK--SKAFEEGQQIHGH 91
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG + ++ V T+L+ MYA+ GR++ A VFD + ++ A+I GY G+I S
Sbjct: 92 VLKLGYE-PDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRS 150
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A MFDE+PV+D +SW A+++G+ + G ++EALE F+EM + V PD T+++VL+ACA
Sbjct: 151 AQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQ 210
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
++ +G +H ++ F N+K+ N LIDLYS+CG +E A +F+ + + +VSWN++
Sbjct: 211 SRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTL 270
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KKI 345
I G+ EAL F M + G P+ V+ L AC+H G I+ G R+ + KK+
Sbjct: 271 IGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG-RWIHVYIDKKL 329
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK------------------------ 381
V+ ++D+Y++ G +E A V +M K
Sbjct: 330 KDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDL 389
Query: 382 ----------PNEVVLGSLLAACRTKGDIILAERLMKYLV---DLDPGVDSNYVLLANMY 428
P+++ LL+AC G + L + K + D+ P ++ +Y + ++
Sbjct: 390 FSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLE-HYGCMIDLL 448
Query: 429 AAVGKWDGAGKIRRTM 444
G + A ++ +TM
Sbjct: 449 GHSGLFKEAKEMIKTM 464
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 148/355 (41%), Gaps = 46/355 (12%)
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP----VRDAISWTAL 186
F A VF ++ + WN M+ GY D SA++++ M + ++ ++ L
Sbjct: 13 FDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFL 72
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
L K FEE + + G EPD S+++ A G L H+ +
Sbjct: 73 LKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDA---HKVFDRSSH 129
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
+D V LI Y+ G I A+++F + + +VSWN++I G+A G EALE F
Sbjct: 130 RDVVSY-TALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKE 188
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M K +PD + L+AC+ + +E G + + + ++ ++DLYS+ G
Sbjct: 189 MMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDD-HGFGSNLKIVNALIDLYSKCG 247
Query: 367 RLEDALNVVENMPMK----------------------------------PNEVVLGSLLA 392
++E A + E + K PN+V + S+L
Sbjct: 248 QVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILP 307
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTM 444
AC G I + + Y+ V + L L +MYA G + A ++ +M
Sbjct: 308 ACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM 362
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
+A VF + + + WN+++ G+A++ AL+ + M G P+ +F L +C+
Sbjct: 18 YAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCA 77
Query: 328 HAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVV 386
+ E+G + + ++K Y P + + ++ +Y++ GRLEDA V + + + V
Sbjct: 78 KSKAFEEGQQIHGHVLKLGYE--PDLYVHTSLISMYAQNGRLEDAHKVFDRSSHR-DVVS 134
Query: 387 LGSLLAACRTKGDIILAERLMKYLVDLDPGVD-SNYVLLANMYAAVGKWDGAGKIRRTMK 445
+L+ + G+I R + + D P D ++ + + YA G + A ++ + M
Sbjct: 135 YTALITGYASSGNI----RSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMM 190
Query: 446 GRGIQKKPGL-----------SSIEIGSGIHEFM 468
++ G S+E+G +H ++
Sbjct: 191 KTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWI 224
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/456 (36%), Positives = 258/456 (56%), Gaps = 34/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ I+ + SG EA F ++ G P+ + + +L+ CA C G I
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARL-GDCTS-GEWI 237
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ G+ RN V V T+LLDMY K G+
Sbjct: 238 DRYISDSGMGRN-VFVATSLLDMYVKC-------------------------------GN 265
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A +F MP +D +SW+ ++ G+ G ++AL+ F +MQ ++PD T++ VL+A
Sbjct: 266 LERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSA 325
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA +G L +G+W + + +F N + LID+YS+CG + A ++F M ++ V W
Sbjct: 326 CATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVW 385
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+++VG ++NG F+ ++K G +PD +F G L C+H G + +G ++F+ MK+
Sbjct: 386 NAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKR 445
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
++ ++P IEHYGC+VDL RAG L +A ++ NMPMKPN VV G+LL C+ D LAE
Sbjct: 446 VFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAE 505
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+++K L++L+P NYV L+N+Y+ +W+ A KIR TMK + IQK S IEI +
Sbjct: 506 QVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIV 565
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF+ GD+SH SE IY+ L+ L +LK G+VP T
Sbjct: 566 HEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTT 601
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 165/324 (50%), Gaps = 36/324 (11%)
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
G PN+ T +L CA + LG IH L+ K G D ++V V T+LL +Y K
Sbjct: 109 GFLPNNFTIPFVLKACAR--KLDVRLGLKIHSLLVKAGYD-HDVFVKTSLLSLYVKCDNF 165
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
D A+++FD++P ++ +SWTA++ G++ G
Sbjct: 166 D-------------------------------DALKVFDDIPDKNVVSWTAIITGYISSG 194
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
+F EA+ F+++ G++PD +++ VL ACA +G G WI RY+ NV V
Sbjct: 195 HFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVAT 254
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
+L+D+Y +CG +E A +F M ++ +VSW+++I G+A NG +AL+ F MQ E KP
Sbjct: 255 SLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKP 314
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
D + G L+AC+ G ++ G+ +M + +S + ++D+YS+ G + A +
Sbjct: 315 DCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTA-LIDMYSKCGSVTQAWEI 373
Query: 375 VENMPMKPNEVVLGSLLAACRTKG 398
M K + VV +++ G
Sbjct: 374 FTAMKRK-DRVVWNAMMVGLSMNG 396
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 123/278 (44%), Gaps = 33/278 (11%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH + +L LD++N ++ +L FG + + +VF ++ + F WN MI
Sbjct: 35 IHARLLRLHLDQDNYLL-NLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMI------- 86
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
G V + F++A+ + M+ G P+ TI VL
Sbjct: 87 ------------------------RGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLK 122
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA + +GL IH ++K + +V V +L+ LY +C + A +VF + + +VS
Sbjct: 123 ACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVS 182
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W +II G+ +G EA+ F + + G KPD S L AC+ G G + D
Sbjct: 183 WTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG-EWIDRYI 241
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ + ++D+Y + G LE A + MP K
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEK 279
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 100/249 (40%), Gaps = 38/249 (15%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
IH +L+ + + N ++ G +++ VF ++ + + WN++I G
Sbjct: 35 IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDC 94
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLRY------- 338
+A+ + SM+ GF P+ + L AC+ H+ L++ G +
Sbjct: 95 FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTS 154
Query: 339 ----------FDIMKKIYRVSP--RIEHYGCIVDLYSRAGRLEDALNVVEN---MPMKPN 383
FD K++ P + + I+ Y +G +A+ + M +KP+
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKI 440
L +LAAC GD E + +Y+ D G+ N + L +MY G + A I
Sbjct: 215 SFSLVKVLAACARLGDCTSGEWIDRYIS--DSGMGRNVFVATSLLDMYVKCGNLERANLI 272
Query: 441 RRTMKGRGI 449
M + I
Sbjct: 273 FSAMPEKDI 281
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 265/448 (59%), Gaps = 5/448 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + I + + G EA F M G P+ T + LL C + + G +H
Sbjct: 130 VSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGN--VKFGKAVH 187
Query: 106 GLVCKLGLD-RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
G + + +N+++G ALLDMY K +++LA F A++ K +WN ++ G + G+
Sbjct: 188 GWMERRKPTISSNLILGNALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKVGE 247
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A F +MP RD +SW +L+ G+ RG F E +M + V PD VT+IS+++A
Sbjct: 248 LEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLVSA 307
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
G L G W H +V++ K + + + LID+Y +CG IE A +VF+ ++K+ + W
Sbjct: 308 ATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIERASRVFKEINKKDVTVW 367
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G A +G+ +ALE F+ MQ E PD V+F L+ACSH+GL++ G++ F M
Sbjct: 368 TTMITGLAFHGYGSKALELFSEMQ-EDVSPDDVTFVSVLSACSHSGLVDQGIKVFSSMTD 426
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P +EHYGC+VDL +R+GRL +A ++++ MPMKP+ + G++L AC+ +GD+ LAE
Sbjct: 427 -YGIEPGVEHYGCLVDLLARSGRLSEAKDIIDQMPMKPSRSIWGAMLNACQAQGDVELAE 485
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ L++LDP + Y LL+N+YAA G+W + KIR TM+ RG++K G SS+ + +
Sbjct: 486 IASRELLNLDPEEEGGYTLLSNIYAASGRWSYSKKIRETMESRGVKKTAGCSSVVVDGVV 545
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLK 492
H F++ D+ H I S+L L ++K
Sbjct: 546 HNFISADKCHPGWVDISSILNCLKNEMK 573
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 159/362 (43%), Gaps = 74/362 (20%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N +I Y+ G + A ++F++MP D +S+ ++ G+ K+G+ EA+ F EM G+E
Sbjct: 102 NTLIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLE 161
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYV--LKQDFKDNVKVCNTLIDLYSRC------- 263
PD TI+ +L +C +G + G +H ++ K N+ + N L+D+Y +C
Sbjct: 162 PDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELAL 221
Query: 264 -------------------GC-----IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
GC +E AR F +M R +VSWNS++ G+A G
Sbjct: 222 RTFGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFAS 281
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GC 357
E M E PD V+ ++A + +G ++ G R+ + R+ +++ +
Sbjct: 282 VKELIVDMVMEKVIPDTVTMISLVSAATESGALDQG-RW--AHGWVIRMQIKLDAFLGSA 338
Query: 358 IVDLYSRAGRLEDALNVVENMPMK---------------------------------PNE 384
++D+Y + G +E A V + + K P++
Sbjct: 339 LIDMYCKCGSIERASRVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEMQEDVSPDD 398
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVD--LDPGVDSNYVLLANMYAAVGKWDGAGKIRR 442
V S+L+AC G + ++ + D ++PGV+ +Y L ++ A G+ A I
Sbjct: 399 VTFVSVLSACSHSGLVDQGIKVFSSMTDYGIEPGVE-HYGCLVDLLARSGRLSEAKDIID 457
Query: 443 TM 444
M
Sbjct: 458 QM 459
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 179/465 (38%), Positives = 271/465 (58%), Gaps = 9/465 (1%)
Query: 39 KSTVNPT-VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
+ T +PT + +TS+I H G A + M G P T L C +
Sbjct: 347 RRTRDPTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPAC-----RG 401
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF-TWNAMI 156
L G +HG KL L + V TALL MYA+ G A +FD M + AM+
Sbjct: 402 LSPGRALHGYAFKLAL-AGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAML 460
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
Y G ++ A +FD +P +D + W A+++G+ + G EAL FR M SGVEPD V
Sbjct: 461 TCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEV 520
Query: 217 TIISVLNACANVGTLGIGLWIHRYVL-KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
T++ VL+A A +GT+ G W+H YV + + +V+V LID+Y +CG + A VF
Sbjct: 521 TVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHG 580
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+ + +V WN++I G+A++G +ALE F +++G P ++F G L ACSH+G++E+G
Sbjct: 581 IGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEG 640
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
+F M++ Y + P+IEHYGC+VDL RAG +++A +V++M + P+ V+ SLLAACR
Sbjct: 641 REFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACR 700
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
++ L +++ YLV Y+LL+N+YAAVG W ++R MK GIQK+PG
Sbjct: 701 LHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGC 760
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
SSIEI ++EF+AGD SH ++ IY ML+ ++ +K G+VP+T
Sbjct: 761 SSIEIDREVYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQT 805
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 132/349 (37%), Gaps = 73/349 (20%)
Query: 84 ITLLSGCADFPSQCLFLGAMIHGLVCKLGL-DRNNVMVGTALLDMYAKFGRMDLATVVFD 142
++LL+ C+ A +H V + GL D + V L YA GR+DL+ +
Sbjct: 293 VSLLTSCSTARR-----AAELHAAVLRTGLLDATDRAVAFRLQRAYAASGRLDLSLALLR 347
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
R + AI +T+ ++ RG+ AL
Sbjct: 348 RTRDPT-------------------------------AIFYTSAIHAHSSRGHRLPALAL 376
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
+M G+ P T+ + L AC L G +H Y K + V L+ +Y+R
Sbjct: 377 LSDMLAQGLLPTAHTLSASLPACRG---LSPGRALHGYAFKLALAGDSYVATALLGMYAR 433
Query: 263 C--------------------------------GCIEFARQVFQRMHKRTLVSWNSIIVG 290
G ++ AR +F + + V WN++I G
Sbjct: 434 AGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDG 493
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
+ +G EAL F M G +PD V+ L+A + G +E G +K RV
Sbjct: 494 YTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQL 553
Query: 351 RIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
+ ++D+Y + G L DA++V + K + VV +++ GD
Sbjct: 554 SVRVGTALIDMYCKCGSLGDAVDVFHGIGDK-DIVVWNAMINGYAMHGD 601
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 262/440 (59%), Gaps = 35/440 (7%)
Query: 61 IAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVM 119
++E AL+ R L PN +T ++L CA + L LG IHG V + +
Sbjct: 424 MSEKALQMFRYLLEQCIKPNAVTVASVLPACASISA--LPLGQEIHGYVLRNAYE-GKCY 480
Query: 120 VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD 179
V +AL+DMYAK GR+DL+ + F +M ++D
Sbjct: 481 VESALMDMYAKCGRLDLSHYI-------------------------------FSKMSLKD 509
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHR 239
++W ++++ F + G +EAL+ FR+M + G++ + VTI S L+ACA++ + G IH
Sbjct: 510 EVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHG 569
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
++K K ++ + LID+Y++CG +E A +VF+ M + VSWNSII + +G V E
Sbjct: 570 VIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKE 629
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
++ + + MQ+EG+KPD V+F ++AC+HAGL+E+GL+ F M K Y ++PR+EH+ C+V
Sbjct: 630 SVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMV 689
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
DLYSR+GRL+ A+ + +MP KP+ + G+LL ACR ++ LA+ + L LDPG
Sbjct: 690 DLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSG 749
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEH 479
YVL++N+ A G+WDG K+RR MK I K PG S +++ + H F+A D+SH ESE
Sbjct: 750 YYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESED 809
Query: 480 IYSMLELLSFDLKLCGYVPE 499
IY+ L+ L +L+ GYVP
Sbjct: 810 IYTSLKALLQELREEGYVPR 829
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 175/353 (49%), Gaps = 36/353 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W IS ++G + EA F M G P+ +T ++LL D L G +H
Sbjct: 309 VTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNG--LKQGKEVH 366
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G + RN V MD +F +A++D Y + D+
Sbjct: 367 GYII-----RNCV--------------HMD-------------AFLVSALVDIYFKCRDV 394
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+A ++D D + + +++G+V G E+AL+ FR + ++P+ VT+ SVL AC
Sbjct: 395 RTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPAC 454
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ L +G IH YVL+ ++ V + L+D+Y++CG ++ + +F +M + V+WN
Sbjct: 455 ASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWN 514
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S+I F+ NG EAL+ F M EG K + V+ + AL+AC+ I G ++ K
Sbjct: 515 SMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIK- 573
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
+ I ++D+Y++ G +E AL V E MP K NEV S+++A G
Sbjct: 574 GPIKADIFAESALIDMYAKCGNMELALRVFEFMPDK-NEVSWNSIISAYGAHG 625
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 194/442 (43%), Gaps = 72/442 (16%)
Query: 31 ISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLH--GTNPNHITFITLLS 88
+++ + ++ ++ W I +G + A L + +M H +P+ T ++
Sbjct: 90 VAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVK 149
Query: 89 GCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS 148
CA + + LG ++H GL ++V VG+AL+ MY+ G +
Sbjct: 150 SCAALGA--VSLGRLVHRTARATGL-ASDVYVGSALIKMYSDAGLL-------------- 192
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
A FD MP RD + W +++G++K G A+ FR M++
Sbjct: 193 -----------------RDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRV 235
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
SG EP++ T+ L+ CA L G+ +H +K + V V NTL+ +Y++C C++
Sbjct: 236 SGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDD 295
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA--- 325
A ++F+ + + LV+WN +I G NG + EAL F M + G +PD V+ L A
Sbjct: 296 AWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTD 355
Query: 326 -----------------CSH------AGLIEDGLRYFDI--MKKIYRVSPRIEHY--GCI 358
C H + L++ + D+ + +Y + I+ +
Sbjct: 356 LNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTV 415
Query: 359 VDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
+ Y G E AL + + +KPN V + S+L AC + + L + + Y++ +
Sbjct: 416 ISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLR-NA 474
Query: 416 GVDSNYV--LLANMYAAVGKWD 435
YV L +MYA G+ D
Sbjct: 475 YEGKCYVESALMDMYAKCGRLD 496
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 164/355 (46%), Gaps = 38/355 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + + ++G + A F M + G PN T LS CA L G +H
Sbjct: 208 VLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCA--AEADLLSGVQLH 265
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L K GL++ V V LL MYAK +D
Sbjct: 266 SLAVKCGLEQE-VAVANTLLSMYAKCRCLD------------------------------ 294
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A R+F+ +P D ++W +++G V+ G +EAL F +M SG PD VT++S+L A
Sbjct: 295 -DAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPAL 353
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++ L G +H Y+++ + + + L+D+Y +C + AR ++ +V +
Sbjct: 354 TDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGS 413
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKK 344
++I G+ +NG +AL+ F + ++ KP+ V+ L AC+ + G +++
Sbjct: 414 TVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRN 473
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
Y +E ++D+Y++ GRL+ + + M +K +EV S++++ G+
Sbjct: 474 AYEGKCYVE--SALMDMYAKCGRLDLSHYIFSKMSLK-DEVTWNSMISSFSQNGE 525
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 121/240 (50%), Gaps = 35/240 (14%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
SK ++ V W S IS ++G EA F +M + G N++T + LS CA P+
Sbjct: 503 SKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPA-- 560
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
++ G IHG++ K G D++A+ +A+ID
Sbjct: 561 IYYGKEIHGVIIK----------GPIKADIFAE----------------------SALID 588
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
Y + G++E A+R+F+ MP ++ +SW ++++ + G +E++ MQ G +PD+VT
Sbjct: 589 MYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVT 648
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDF-KDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+++++ACA+ G + GL + + + K+ ++ ++DLYSR G ++ A Q M
Sbjct: 649 FLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADM 708
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 149/359 (41%), Gaps = 40/359 (11%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGL--DRNNVMVGTALLDMYAKFGRMDLATVV 140
+ LL GC P L LG IH G + N++ + T LL MY R A V
Sbjct: 35 LLALLRGCVSAPH--LPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAV 92
Query: 141 FDAM---RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
F A+ SS WN +I G+ G AV + +M WT
Sbjct: 93 FSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKM-------WT------------- 132
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
+ PD T+ V+ +CA +G + +G +HR +V V + LI
Sbjct: 133 ---------HPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALI 183
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
+YS G + AR F M R V WN ++ G+ G VG A+ F +M+ G +P+
Sbjct: 184 KMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFA 243
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
+ L+ C+ + G++ + K + + ++ +Y++ L+DA + E
Sbjct: 244 TLACFLSVCAAEADLLSGVQLHSLAVKC-GLEQEVAVANTLLSMYAKCRCLDDAWRLFEL 302
Query: 378 MPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDG 436
+P + + V +++ C G +L E L + L G + V L ++ A+ +G
Sbjct: 303 LP-RDDLVTWNGMISGCVQNG--LLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNG 358
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 83/208 (39%), Gaps = 46/208 (22%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S IS + G + E+ RM G P+H+TF+ L+S CA H
Sbjct: 612 VSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACA-------------H 658
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + GL M L+ RM+ + M+D Y R G +
Sbjct: 659 AGLVEEGLQLFQCMTKEYLIA-----PRME---------------HFACMVDLYSRSGRL 698
Query: 166 ESAVRMFDEMPVR-DAISWTALLNGFVKRGYFEEALECFREMQISGVEP---DYVTIISV 221
+ A++ +MP + DA W ALL+ R + L ++ ++P Y ++S
Sbjct: 699 DKAIQFIADMPFKPDAGIWGALLHAC--RVHRNVELADIASQELFKLDPGNSGYYVLMSN 756
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDN 249
+NA A G W +++ KDN
Sbjct: 757 INAVA-------GRWDGVSKVRRLMKDN 777
>gi|357150678|ref|XP_003575540.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 491
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 161/400 (40%), Positives = 244/400 (61%), Gaps = 4/400 (1%)
Query: 104 IHGLVCKLGLDRN--NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IH L+ K GL R+ V T+L +YA+ GR+ A VFD M + +WN ++DG++R
Sbjct: 87 IHTLLVKSGLPRSVSGVYASTSLARVYARHGRLADARKVFDGMPETTVVSWNVLLDGFVR 146
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTIIS 220
GD+++A +F EM R+ +SW ++ GF + G +EA+E F EM + G+ PD T++
Sbjct: 147 AGDLDAAWELFVEMTERNVVSWNTVMVGFARLGRAQEAVELFVEMTTVYGLVPDEATMVG 206
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
++A N+G LG+G H YV++++F + + LI++Y+RCG + A F + +
Sbjct: 207 FVSAVRNIGLLGLGRSAHGYVIRREFSLDGALGVGLINMYTRCGSMTAAYLCFSSVTSKN 266
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+ W S I GFA +G AL F M++ G +P+ V+F L ACSH GL+++G +YF+
Sbjct: 267 VEHWTSAIGGFAAHGHPDMALRLFAEMRELGIEPNDVTFVAVLNACSHGGLVDEGFKYFN 326
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+M+K+ + P I+HYGC+VDL RAG LE+A N+ ++P P V SLLAAC+T G++
Sbjct: 327 MMRKM-GIRPSIQHYGCLVDLLGRAGFLEEAFNLASSLPKDPGFVTWSSLLAACQTHGNV 385
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+AE + L D +P S+YVLL+N YA G+W+ + R M+ KKPGLS IE+
Sbjct: 386 DMAEVAAQKLADAEPNHGSSYVLLSNAYARAGQWEDLKRTRSRMEAHRAVKKPGLSWIEV 445
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F D+SH E++ IY MLE L +L GY PET
Sbjct: 446 DGSVHSFGTADKSHTENKGIYQMLENLKLNLTSAGYEPET 485
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 47 QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
WTS+I G A F M G PN +TF+ +L+ C+ + G
Sbjct: 269 HWTSAIGGFAAHGHPDMALRLFAEMRELGIEPNDVTFVAVLNACSH--GGLVDEGFKYFN 326
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF-TWNAMIDGYMRRGDI 165
++ K+G+ R ++ L+D+ + G ++ A + ++ F TW++++ G++
Sbjct: 327 MMRKMGI-RPSIQHYGCLVDLLGRAGFLEEAFNLASSLPKDPGFVTWSSLLAACQTHGNV 385
Query: 166 E----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEE 198
+ +A ++ D P + S+ L N + + G +E+
Sbjct: 386 DMAEVAAQKLADAEPNHGS-SYVLLSNAYARAGQWED 421
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 181/462 (39%), Positives = 262/462 (56%), Gaps = 8/462 (1%)
Query: 42 VNPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
V P V W +S RSGR +A RM G P+ LS D + +
Sbjct: 114 VEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKE--VSV 171
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +HG V K G R + V TAL+DMY K GR D VF + NA++ G
Sbjct: 172 GKQVHGYVVKAGC-RLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLS 230
Query: 161 RRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
R + A+ +F E R + +SWT+++ V+ G EA++ FR MQ GVEP+ V
Sbjct: 231 RNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSV 290
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
TI VL A ANV L G H + L++ F +V V + L+D+Y++CG AR +F M
Sbjct: 291 TIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAM 350
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
R +VSWN++I G+A++G A++ F SMQK KPD V+FT L ACS AGL E+G
Sbjct: 351 PSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGR 410
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
RYF+ M++ + +SPR+EHY C+V L R+G+L++A +++ MP +P+ + GSLL +CR
Sbjct: 411 RYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRV 470
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
G+++LAE + L L+PG NYVLL+N+YA+ WDG ++R MK G++K+ G S
Sbjct: 471 YGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCS 530
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
IEI + +H +AGD SH I L L+ ++ G+ P
Sbjct: 531 WIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAP 572
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 132/296 (44%), Gaps = 13/296 (4%)
Query: 78 PNHITFITLLSGCADFP-SQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
P+ + L C P ++ L A++ GL + V ++LL Y + G
Sbjct: 18 PDPHLLPSALKSCPAQPLARALHAAAVVSGLA-------EDPFVASSLLHSYIRLGATGA 70
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR----DAISWTALLNGFVK 192
A VFD M K+ W+A+I GY RGD E+A + ++M + I+W L++G +
Sbjct: 71 ARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNR 130
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
G +A+ M G PD + L+A +V + +G +H YV+K + + V
Sbjct: 131 SGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACV 190
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
LID+Y +CG + +VF + S N+++ G + N V EAL F G
Sbjct: 191 VTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGV 250
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
+ + VS+T + C G + + F M+ I V P C++ ++ L
Sbjct: 251 ELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSI-GVEPNSVTIPCVLPAFANVAAL 305
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 154/374 (41%), Positives = 240/374 (64%), Gaps = 1/374 (0%)
Query: 114 DRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
+R+ V T +LD Y K G M+ A +F+ M ++ +W+ M+ GY + GD++ A +FD
Sbjct: 211 ERDTVSWNT-ILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDMARILFD 269
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI 233
+MPV++ + WT +++G+ ++G ++A+ + +M+ +G++ D T+IS+L+ACA G LG+
Sbjct: 270 KMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGL 329
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV 293
G +H + + FK + V N LID+Y++CG +E A +F M ++ +VSWN+II G A+
Sbjct: 330 GKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAM 389
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE 353
+G +AL+ F+ M+ EGF PD V+F G L AC+HAG +++GL YF M++ Y V P +E
Sbjct: 390 HGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVE 449
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
HYGC+VDL R GRL++A +V +MP++PN ++ G+LL ACR LAE + LV
Sbjct: 450 HYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKS 509
Query: 414 DPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRS 473
+ N +L+N+YAA G WD IR MK IQK G SSIE+ +HEF DRS
Sbjct: 510 ELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRS 569
Query: 474 HIESEHIYSMLELL 487
H +S+ IY ++ L
Sbjct: 570 HPKSDRIYKTIDGL 583
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 168/356 (47%), Gaps = 48/356 (13%)
Query: 30 QISIQTNNSKSTVNPTVQWTSSISR-HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLS 88
Q+++ N +P V +++ R H R+ A F M G ++ T+ LL
Sbjct: 64 QMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLK 123
Query: 89 GCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATV--VFDAMRV 146
C+ + + MIH V K+G + + V +L+D Y K G +A VF+ M
Sbjct: 124 ACSG--KVWVRVVEMIHAQVEKMGFCLD-IFVPNSLIDSYFKCGLDGVAAARKVFEVMAE 180
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+ + +WN+MI G ++ G++ A R+FDEMP RD +SW +L+G+VK G A E F +M
Sbjct: 181 RDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKM 240
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
NV +T++ YS+ G +
Sbjct: 241 PAR---------------------------------------NVVSWSTMVLGYSKAGDM 261
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
+ AR +F +M + LV W +I G+A G +A+ +N M++ G K D + L+AC
Sbjct: 262 DMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSAC 321
Query: 327 SHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ +GL+ G R + I + ++ S + + ++D+Y++ G LE+AL++ M K
Sbjct: 322 AVSGLLGLGKRVHASIERTRFKCSTPVSN--ALIDMYAKCGSLENALSIFHGMVRK 375
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 112/237 (47%), Gaps = 11/237 (4%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+ SF +I + + AV +F+++ D + + L+ V+ A F EM
Sbjct: 47 RESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEM 106
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC- 265
Q SGV D T +L AC+ + + IH V K F ++ V N+LID Y +CG
Sbjct: 107 QDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLD 166
Query: 266 -IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
+ AR+VF+ M +R VSWNS+I G G +GEA F+ M + D VS+ L
Sbjct: 167 GVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPER----DTVSWNTILD 222
Query: 325 ACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
AG + F+ M VS + +V YS+AG ++ A + + MP+K
Sbjct: 223 GYVKAGEMNAAFELFEKMPARNVVS-----WSTMVLGYSKAGDMDMARILFDKMPVK 274
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/397 (39%), Positives = 256/397 (64%), Gaps = 3/397 (0%)
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
++ G +HG G D ++V V T L+ MY+ G + A VFD MRV+ WNA++
Sbjct: 132 VWFGRQVHGQAVVFGFD-SSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVWNALLA 190
Query: 158 GYMRRGDIESAVRMFDEMP--VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
GY + G+++ A + + MP VR+A+SWT +++G+ + G EA+E F+ M + V+PD
Sbjct: 191 GYGKVGEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDE 250
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
VT+++VL+ACA++G+L +G I YV + V + N +ID+Y++ G I A +VF+
Sbjct: 251 VTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFES 310
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+++R +V+W +II G A +G EAL F+ M K G KP+ V+F L+ACSH G ++ G
Sbjct: 311 VNERNVVTWTTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLG 370
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
R+F+ M+ Y ++P IEHYGC++DL RAG+L +A V+++MP + N + GSLLAA
Sbjct: 371 NRFFNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASN 430
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
DI + ER + L+ L+P NY+LLAN+Y+ +G+WD + +R+ MKG G++K G
Sbjct: 431 VHHDIDVGERALYQLIKLEPNNSGNYMLLANLYSNLGRWDESRMMRKMMKGIGVKKLAGE 490
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
SSIE+ + +++F++GD SH + E I+ +L+ + ++
Sbjct: 491 SSIEVENRVYKFISGDLSHPQVEKIHELLQEMDLQIQ 527
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 114/236 (48%), Gaps = 35/236 (14%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V WT IS + RSGR +EA F RM + +P+ +T + +LS CAD S L LG
Sbjct: 212 VRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACADLGS--LELG 269
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
I V G++R V + A++DMYAK G + A VF+++ ++ TW +I G
Sbjct: 270 ERICSYVDHRGMNR-AVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTTIITGLAT 328
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G A+ MFD M VK +GV+P+ VT I++
Sbjct: 329 HGHGAEALVMFDRM---------------VK----------------AGVKPNDVTFIAI 357
Query: 222 LNACANVGTLGIG-LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
L+AC++VG + +G + + K N++ +IDL R G + A +V + M
Sbjct: 358 LSACSHVGWVDLGNRFFNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSM 413
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 155/419 (36%), Gaps = 119/419 (28%)
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + GL+R+N+ V ++ + G + A VF +++ N MI
Sbjct: 35 HCFMIITGLNRDNLNVAK-FIEACSNAGHLRYAYSVFTHQPFPNTYLHNTMI-------- 85
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A+ + DE R A+ +R+ +PD T VL
Sbjct: 86 --RALSLVDE------------------RNAHSIAITVYRKFWAFCAKPDTFTFPFVLKI 125
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL--- 281
V + G +H + F +V V LI +YS CG + AR+VF M R +
Sbjct: 126 VVRVSDVWFGRQVHGQAVVFGFDSSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVW 185
Query: 282 ------------------------------VSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
VSW +I G+A +G EA+E F M E
Sbjct: 186 NALLAGYGKVGEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMEN 245
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG---------CIVDLY 362
PD V+ L+AC+ G +E G R+ ++H G ++D+Y
Sbjct: 246 VDPDEVTLLAVLSACADLGSLELG----------ERICSYVDHRGMNRAVSLNNAVIDMY 295
Query: 363 SRAGRLEDALNVVENMP----------------------------------MKPNEVVLG 388
+++G + AL V E++ +KPN+V
Sbjct: 296 AKSGNITKALEVFESVNERNVVTWTTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFI 355
Query: 389 SLLAACRTKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
++L+AC G + L R M+ ++P ++ +Y + ++ GK A ++ ++M
Sbjct: 356 AILSACSHVGWVDLGNRFFNSMRSKYGINPNIE-HYGCMIDLLGRAGKLREAEEVIKSM 413
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/427 (39%), Positives = 250/427 (58%), Gaps = 37/427 (8%)
Query: 77 NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
NP+ TF ++L CA + G IH +V K G + N
Sbjct: 89 NPDEFTFTSVLKACAGLAH--VVNGQKIHAMVTKQGFESN-------------------- 126
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD--AISWTALLNGFVKRG 194
F N++ID Y + G + A +FDEM VRD + W A++ G+ +
Sbjct: 127 ------------LFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNE 174
Query: 195 YFEEALECFREMQ-ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
+ +A+E FR MQ GV P+ VT++SVL ACA++G L +G WI ++ +++ + +
Sbjct: 175 KYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMALGLFLG 234
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
N L D+Y++CGCI AR+VF +M +R ++SW+ II G A+ G EA F M G K
Sbjct: 235 NALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGEK 294
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
P+ V F G LTAC+HAGL++ GL F+ M K Y VSP++EHYGC+VDL SRAG L+ A +
Sbjct: 295 PNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAED 354
Query: 374 VVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGK 433
++ +MPMKPN ++ G+LL CR D +R+++++++LD +YV LAN+Y+++G+
Sbjct: 355 MISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVYLANVYSSMGR 414
Query: 434 WDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493
D A K R M+ G+ K PG S IE+ + +HEF GD SH ES IYSM+ L + +KL
Sbjct: 415 LDDAAKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSMIRELMWKMKL 474
Query: 494 CGYVPET 500
GY P+T
Sbjct: 475 AGYKPKT 481
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 122/284 (42%), Gaps = 42/284 (14%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS---GV 211
+I ++ A +F + + + A L + ++ A++ F Q+S
Sbjct: 30 LIGACADHANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNH-QVSSPNAP 88
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
PD T SVL ACA + + G IH V KQ F+ N+ V N+LID+Y + G + AR
Sbjct: 89 NPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARH 148
Query: 272 VFQRM--HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTACSH 328
+F M R +V WN++I G+A N +A+E F MQ+ G P+ V+ L AC+H
Sbjct: 149 LFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAH 208
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP--------- 379
G ++ G ++ D ++ + + D+Y++ G + +A V M
Sbjct: 209 LGALDLG-KWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSI 267
Query: 380 -------------------------MKPNEVVLGSLLAACRTKG 398
KPN+VV LL AC G
Sbjct: 268 IICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAG 311
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 47/254 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRM--TLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
V W + I+ + ++ + ++A +E RM G PN +T +++L CA + L LG
Sbjct: 160 VVCWNAMIAGYAQNEKYSDA-IEVFRMMQQFGGVVPNDVTLVSVLPACAHLGA--LDLGK 216
Query: 103 MIHGLVCK----LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
I G + + LGL +G AL DMYAK G + A VF+ M + +W+ +I
Sbjct: 217 WIDGFISRREMALGL-----FLGNALADMYAKCGCITEARRVFNKMEERDVISWSIII-- 269
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
G G+ +EA CF EM G +P+ V
Sbjct: 270 -----------------------------CGLAMYGHADEAFGCFYEMLDCGEKPNDVVF 300
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM- 276
+ +L AC + G + GL + K+ V+ ++DL SR G ++ A + M
Sbjct: 301 MGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMP 360
Query: 277 HKRTLVSWNSIIVG 290
K ++ W +++ G
Sbjct: 361 MKPNVIIWGALLGG 374
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 73/176 (41%), Gaps = 16/176 (9%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W+ I G EA F M G PN + F+ LL+ C G +
Sbjct: 262 VISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTH-------AGLVK 314
Query: 105 HGLVCKLGLDRN-----NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS-FTWNAMIDG 158
GL C +D+ V ++D+ ++ G +D A + +M +K + W A++ G
Sbjct: 315 KGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGG 374
Query: 159 ---YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV 211
Y G + V+ E+ + S+ L N + G ++A +C M+ +GV
Sbjct: 375 CRIYRDSGRGQRVVQHILELDSDHSGSYVYLANVYSSMGRLDDAAKCRLRMRENGV 430
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/437 (37%), Positives = 250/437 (57%), Gaps = 31/437 (7%)
Query: 64 AALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTA 123
AA F M PN TF LL CA P +G H K G + V
Sbjct: 110 AAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSP-DVGLQAHAAALKFGFATDQ-YVSNT 167
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
L+ MY+ FG G++ GD A +FD MP A++W
Sbjct: 168 LIHMYSCFG------------------------GGFL--GD---ARNVFDRMPKESAVTW 198
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
+A++ G+V+ G +A+E FREMQ +GV+ D VT+I VL A ++G L + W+ R+V +
Sbjct: 199 SAMIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVER 258
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
+ +V +CN LID ++CG ++ A VF+ M +R++VSW S+I A+ G EA+
Sbjct: 259 EGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRV 318
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F M+ G PD V+F G LTACSHAG++++G YFD MK Y + P+IEHYGC+VD++
Sbjct: 319 FEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFG 378
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
RAG +E A+ V MP++PN V+ SL++ACR G + L E + + L+ P ++NY++
Sbjct: 379 RAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIM 438
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSM 483
L+N++A +W +IRR M RGI+K PG S +E+ +HEF+AGD SH + + IY M
Sbjct: 439 LSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRM 498
Query: 484 LELLSFDLKLCGYVPET 500
+E ++ +L+ G++ T
Sbjct: 499 VEEMARELRRVGHIAAT 515
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 113/253 (44%), Gaps = 36/253 (14%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I + R G ++A F M +G + +T I +L+ D + L L +
Sbjct: 195 AVTWSAMIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGA--LELARWV 252
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
V + G+ ++ V + AL+D AK G +D A VF+ M+ +S +W ++ID G
Sbjct: 253 RRFVEREGIGKS-VTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGR 311
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ AVR+F+ EM+++GV PD V I VL A
Sbjct: 312 GKEAVRVFE-------------------------------EMKVAGVPPDDVAFIGVLTA 340
Query: 225 CANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLV 282
C++ G + G + ++ + ++ ++D++ R G +E A + + M + V
Sbjct: 341 CSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPV 400
Query: 283 SWNSIIVGFAVNG 295
W S++ +G
Sbjct: 401 IWRSLVSACRAHG 413
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 157/394 (39%), Positives = 253/394 (64%), Gaps = 3/394 (0%)
Query: 105 HGLVCKLG-LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
H L+ KLG ++ + +AL+ YAK + A VFD + + + +NA++ Y + G
Sbjct: 108 HSLLIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGG 167
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVL 222
++SA ++F+EMP R+ +SWTA+++G+ + G EEA+E F EM + +GV+P+ +T+ SVL
Sbjct: 168 LVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVL 227
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTL 281
ACA VG + +G + Y + NV V N L+++YS+CG I A QVFQ + ++ L
Sbjct: 228 PACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDL 287
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
SWNS+I+ FAV+G EAL F ++ G KPDG++F G + AC+H GL+ +G +FD
Sbjct: 288 CSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDS 347
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M+ + + PRIEHYGC+VDL RAG L ++ +++ +MP++P+ V+ G+LL AC G++
Sbjct: 348 MEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVE 407
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LAE M L+ L+P +N V+L+N+YA+ GKWDG ++ + +K + +K G S IE+
Sbjct: 408 LAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFIELD 467
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCG 495
+H+F+ D+SH E +Y+ L ++ +KL G
Sbjct: 468 GTMHKFLVEDKSHPRFEEVYNTLNSVTMTMKLVG 501
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 35/224 (15%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V WT+ +S + ++GR EA F M G PN +T ++L CA + + LG
Sbjct: 184 VVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPACAAVGA--MELGRK 241
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+ GL R NV V ALL+MY+K G + A VF G R+
Sbjct: 242 VEEYARGKGLLR-NVYVANALLEMYSKCGSIRQAWQVF---------------QGIGRQQ 285
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+ S W +++ F G + EAL F +++++GV+PD +T + V+
Sbjct: 286 DLCS---------------WNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVIL 330
Query: 224 ACANVGTLGIG-LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
AC + G + G L+ + K ++ ++DL R G +
Sbjct: 331 ACTHGGLVNEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLL 374
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 168/459 (36%), Positives = 261/459 (56%), Gaps = 36/459 (7%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
N V W + I+ + ++G E F M G + IT +++++ C LG
Sbjct: 183 NGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDA--KLGK 240
Query: 103 MIHGLVCKLGLDRN-NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ V + GL RN N+M TAL+DMYAK
Sbjct: 241 WVAEYVDEKGLVRNRNLM--TALIDMYAKC------------------------------ 268
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++ A R+FD M RD ++W+A+++G+ + EAL F EMQ++ VEP+ VT++SV
Sbjct: 269 -GELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSV 327
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+ACA +G L G W+H Y+ ++ + + L+D Y++CGCI+ A + F+ M +
Sbjct: 328 LSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNS 387
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+W ++I G A NG EALE F+SM+K +P V+F G L ACSH+ L+E+G R+FD
Sbjct: 388 WTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDS 447
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M + Y + PR EHYGC+VDL RAG +++A + MP++PN V+ +LL++C ++
Sbjct: 448 MTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVE 507
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
+ E +K +V L+P +Y+LL+N+YA+VG+W A IR+ MK RGI+K PG S IE+
Sbjct: 508 IGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELD 567
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ EF A D H + + IY +E + +K+ GY+P T
Sbjct: 568 GVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNT 606
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 133/249 (53%), Gaps = 2/249 (0%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F +++I Y D+ +A +FD + + W A++ ++K G + E +E F+ M
Sbjct: 155 FVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEV 214
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
GV D +T++SV+ AC +G +G W+ YV ++ N + LID+Y++CG + A
Sbjct: 215 GVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKA 274
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
R++F M R +V+W+++I G+ EAL F+ MQ +P+ V+ L+AC+
Sbjct: 275 RRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVL 334
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
G +E G +++ R+S I +VD Y++ G ++DA+ E+MP+K N +
Sbjct: 335 GALETGKWVHSYIRR-KRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK-NSWTWTA 392
Query: 390 LLAACRTKG 398
L+ T G
Sbjct: 393 LIKGMATNG 401
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 44/267 (16%)
Query: 183 WTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
+ L+ + G+ E+AL F EM ++ V PD T+ L +C+ + TL +G I Y
Sbjct: 86 YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
+K+ + V ++LI +Y+ C + A+ +F + + +V WN+II + NG E +
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAG-----------LIEDGL-------------- 336
E F M + G D ++ +TAC G + E GL
Sbjct: 206 EMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMY 265
Query: 337 ----------RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM---KPN 383
R FD M+ S + + ++ Y++A + +AL + M + +PN
Sbjct: 266 AKCGELGKARRLFDGMQ-----SRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPN 320
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYL 410
+V + S+L+AC G + + + Y+
Sbjct: 321 DVTMVSVLSACAVLGALETGKWVHSYI 347
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/457 (38%), Positives = 262/457 (57%), Gaps = 40/457 (8%)
Query: 47 QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC---ADFPSQCLFLGAM 103
WT++IS + G+ EA F R+ G P+ + + +LS C D S G
Sbjct: 176 SWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRS-----GEW 230
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
I + + G+ RN V V TAL+D Y + G
Sbjct: 231 IDEYITENGMVRN-VFVATALVDF-------------------------------YGKCG 258
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
++E A +FD M ++ +SW++++ G+ G +EAL+ F +M G++PD ++ VL
Sbjct: 259 NMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLC 318
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
+CA +G L +G W + +F DN + LID+Y++CG ++ A +VF+ M K+ V
Sbjct: 319 SCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVV 378
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN+ I G A++G V +AL F M+K G KPD +F G L AC+HAGL+E+G RYF+ M+
Sbjct: 379 WNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSME 438
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
++ ++P IEHYGC+VDL RAG L++A ++++MPM+ N +V G+LL CR D L
Sbjct: 439 CVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLV 498
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E ++K L+ L+P NYVLL+N+YAA KW+ A KIR M RG++K PG S IE+
Sbjct: 499 EVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGV 558
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H+F+ GD SH SE IY+ L L+ DLK GYVP T
Sbjct: 559 VHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTT 595
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 163/336 (48%), Gaps = 42/336 (12%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ M G +P+ TF +L CA LG +H LV K G + + V +L+++
Sbjct: 96 YHSMRKEGLSPDSFTFPFVLKACARVLDS--ELGVKMHSLVVKAGCEAD-AFVKISLINL 152
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y K G +D +A ++FD++P ++ SWTA +
Sbjct: 153 YTKCGFID-------------------------------NAFKVFDDIPDKNFASWTATI 181
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
+G+V G EA++ FR + G+ PD +++ VL+AC G L G WI Y+ +
Sbjct: 182 SGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMV 241
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
NV V L+D Y +CG +E AR VF M ++ +VSW+S+I G+A NG EAL+ F M
Sbjct: 242 RNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKM 301
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY---GCIVDLYSR 364
EG KPD + G L +C+ G +E G D + + +++ ++D+Y++
Sbjct: 302 LNEGLKPDCYAMVGVLCSCARLGALELG----DWASNLINGNEFLDNSVLGTALIDMYAK 357
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
GR++ A V M K + VV + ++ G +
Sbjct: 358 CGRMDRAWEVFRGMR-KKDRVVWNAAISGLAMSGHV 392
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 149/321 (46%), Gaps = 38/321 (11%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G+ + R+ D+ + + ++ G V F+E++E + M+ G+ PD T VL
Sbjct: 56 GNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVL 115
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
ACA V +G+ +H V+K + + V +LI+LY++CG I+ A +VF + +
Sbjct: 116 KACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFA 175
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-- 340
SW + I G+ G EA++ F + + G +PD S L+AC G + G + D
Sbjct: 176 SWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSG-EWIDEY 234
Query: 341 -----IMKKIYRVSPRIEHYG------------------------CIVDLYSRAGRLEDA 371
+++ ++ + ++ YG ++ Y+ G ++A
Sbjct: 235 ITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEA 294
Query: 372 LNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV--LLAN 426
L++ M +KP+ + +L +C G + L + L++ + +D++ + L +
Sbjct: 295 LDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGD-WASNLINGNEFLDNSVLGTALID 353
Query: 427 MYAAVGKWDGAGKIRRTMKGR 447
MYA G+ D A ++ R M+ +
Sbjct: 354 MYAKCGRMDRAWEVFRGMRKK 374
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 108/250 (43%), Gaps = 42/250 (16%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W+S I + +G EA F +M G P+ + +L CA + L LG
Sbjct: 276 VSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGA--LELGDWAS 333
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L+ N+V+ GTAL+DMYAK GRMD A VF MR K WNA I G G +
Sbjct: 334 NLINGNEFLDNSVL-GTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHV 392
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
++AL F +M+ SG++PD T + +L AC
Sbjct: 393 -------------------------------KDALGLFGQMEKSGIKPDRNTFVGLLCAC 421
Query: 226 ANVGTLGIGLWIHRYVLKQD----FKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRT 280
+ G + G RY + ++ ++DL R GC++ A Q+ + M +
Sbjct: 422 THAGLVEEG---RRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEAN 478
Query: 281 LVSWNSIIVG 290
+ W +++ G
Sbjct: 479 AIVWGALLGG 488
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/256 (18%), Positives = 105/256 (41%), Gaps = 61/256 (23%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
IH +L+ ++ + N ++ G ++ ++ + + + +N++I G +N
Sbjct: 29 IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDC 88
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG 356
E++E ++SM+KEG PD +F L AC+ E G++ ++ K G
Sbjct: 89 FQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKA----------G 138
Query: 357 C---------IVDLYSRAGRLEDALNVVENMP---------------------------- 379
C +++LY++ G +++A V +++P
Sbjct: 139 CEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFR 198
Query: 380 ------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGK 433
++P+ L +L+AC+ GD+ E + +Y+ + ++ N++ A
Sbjct: 199 RLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENG--------MVRNVFVATAL 250
Query: 434 WDGAGKIRRTMKGRGI 449
D GK + R +
Sbjct: 251 VDFYGKCGNMERARSV 266
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 166/460 (36%), Positives = 260/460 (56%), Gaps = 5/460 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL--GAM 103
V W + IS + R G EA F RM G + T+ +L+S C + G
Sbjct: 249 VAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQ 308
Query: 104 IHGLVCKLGLDRNN---VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
+HG + + ++ ++ + V AL+ Y K+ RM A VFD M V+ +WNA++ GY+
Sbjct: 309 VHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYV 368
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
IE A +F EMP R+ ++WT +++G + G+ EE L+ F +M+ G+EP
Sbjct: 369 NAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAG 428
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+ AC+ +G+L G IH V++ + N LI +YSRCG +E A VF M
Sbjct: 429 AITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVD 488
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
VSWN++I A +G +A+E F M KE PD ++F LTAC+HAGLI++G YFD
Sbjct: 489 SVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFD 548
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M Y ++P +HY ++DL RAG A +V+++MP + + +LLA CR G++
Sbjct: 549 TMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNM 608
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L + L++L PG D Y++L+NMYAA+G+WD ++R M+ RG++K+PG S +E+
Sbjct: 609 ELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEV 668
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ +H F+ D H E + +Y+ L+ L ++K GYVP+T
Sbjct: 669 ENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDT 708
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 202/440 (45%), Gaps = 84/440 (19%)
Query: 36 NNSKSTVNPTVQWTSSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSG---CA 91
N + T+ TV + + I+ + G AAL F +M +G P+ TF ++LS A
Sbjct: 95 NATPLTIRDTVSYNAMITAYSH-GNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIA 153
Query: 92 DFPSQCLFLGAMIHGLVCKLGLDRNNVM---VGTALLDMYAKFGRMDL---------ATV 139
D C M+H V KLG ++ V ALL Y L A
Sbjct: 154 DEERHC----QMLHCEVIKLG----TLLIPSVTNALLSCYVCCASSPLVKSSQLMASARK 205
Query: 140 VFDAMRVKSSF--TWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
VFD + +W MI GY+R D+ +A + D + ++W A+++G+V+RG +E
Sbjct: 206 VFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYE 265
Query: 198 EALECFREMQISGVEPDYVTIISVLNACAN----VGTLGIGLWIHRYVLKQDFKDN---- 249
EA + FR M G++ D T S+++AC + +G G +H Y+L+ + +
Sbjct: 266 EAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFV 325
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF------------------ 291
+ V N LI Y++ + AR+VF +M R ++SWN+++ G+
Sbjct: 326 LSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPE 385
Query: 292 -------------AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
A NGF E L+ FN M+ EG +P +F GA+TACS G +++G
Sbjct: 386 RNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNG--- 442
Query: 339 FDIMKKIYRVSPRIEHYG------CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
++I+ R+ H ++ +YSR G +E A +V MP + V +++A
Sbjct: 443 ----QQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPY-VDSVSWNAMIA 497
Query: 393 ACRTKGD----IILAERLMK 408
A G I L E++MK
Sbjct: 498 ALAQHGHGVKAIELFEQMMK 517
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 130/333 (39%), Gaps = 59/333 (17%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H + G + N + L+++Y K + A +FD + ++ Y G
Sbjct: 27 VHAHILTSGF-KPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSG 85
Query: 164 DIESAVRMFDEMP--VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+++ A ++F+ P +RD +S+ A++ + AL F +M+ G PD T SV
Sbjct: 86 NVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSV 145
Query: 222 LNACANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGC---------IEFARQ 271
L+A + + +H V+K V N L+ Y C + AR+
Sbjct: 146 LSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARK 205
Query: 272 VFQRMHKRTL---------------------------------VSWNSIIVGFAVNGFVG 298
VF K + V+WN++I G+ G
Sbjct: 206 VFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYE 265
Query: 299 EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY----RVSPRIEH 354
EA + F M G + D ++T ++AC G + + F+ ++++ R H
Sbjct: 266 EAFDTFRRMHSMGIQEDEYTYTSLISAC---GSCNEKMGMFNCGRQVHGYILRTVVEPSH 322
Query: 355 Y------GCIVDLYSRAGRLEDALNVVENMPMK 381
+ ++ Y++ R+ +A V + MP++
Sbjct: 323 HFVLSVNNALITFYTKYDRMIEARRVFDKMPVR 355
>gi|115470713|ref|NP_001058955.1| Os07g0163900 [Oryza sativa Japonica Group]
gi|113610491|dbj|BAF20869.1| Os07g0163900 [Oryza sativa Japonica Group]
Length = 664
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 161/430 (37%), Positives = 246/430 (57%), Gaps = 7/430 (1%)
Query: 77 NPNHITFITL-----LSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF 131
NP+ TF+ L+ S C FLG+ +H L K G ++ V AL+ Y
Sbjct: 136 NPHSFTFLLASISNHLNAAGPSASACSFLGSHVHALAVKAGAA-GDLFVRNALVHFYGVS 194
Query: 132 GRMDLATVVFDAM-RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
G + VFD + RV+ TWN ++ GY+R G + A +FDEMPVRD ISW+ L+ G+
Sbjct: 195 GDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGY 254
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
VK E AL FR M GV P+ +++ L+A A +G L G ++H V + +
Sbjct: 255 VKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCM 314
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
V L+D+Y++CGC+ AR+VF M +R + +WN++I G A +G +A+E F E
Sbjct: 315 NVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISE 374
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
G P V+F G L CS +GL+ +G RYF ++ + YR+ P +EHYGC+VDL RAG + +
Sbjct: 375 GLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPE 434
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
A+ ++E M + P+ V+ G++L++C+T G + L + L++LDP YVLL+ +YA
Sbjct: 435 AIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAK 494
Query: 431 VGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFD 490
KWD ++R+ M RG K G S +E +H+F+ GD H +S IY L++++
Sbjct: 495 ANKWDEVREVRKLMSSRGTNKSAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKR 554
Query: 491 LKLCGYVPET 500
L GYVP+
Sbjct: 555 LTEAGYVPDV 564
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 36/258 (13%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V + W++ + + + + A F M G PN +T LS A L G
Sbjct: 241 VRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARL--GLLEHG 298
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H +V + G+ + VG AL+DMYAK G + +A VFD MR + F WNAMI
Sbjct: 299 KFVHNVVQRSGMP-VCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMI----- 352
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G G +A+E F G+ P VT + V
Sbjct: 353 --------------------------CGLAAHGLGRDAVELFERFISEGLSPTNVTFVGV 386
Query: 222 LNACANVGTLGIGLWIHRYVL-KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KR 279
LN C+ G + G + ++ K + ++ ++DL R G + A ++ + MH
Sbjct: 387 LNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAP 446
Query: 280 TLVSWNSIIVGFAVNGFV 297
V W +I+ +G V
Sbjct: 447 DPVLWGTILSSCKTHGLV 464
>gi|23617093|dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 681
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 161/430 (37%), Positives = 246/430 (57%), Gaps = 7/430 (1%)
Query: 77 NPNHITFITL-----LSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF 131
NP+ TF+ L+ S C FLG+ +H L K G ++ V AL+ Y
Sbjct: 136 NPHSFTFLLASISNHLNAAGPSASACSFLGSHVHALAVKAGAA-GDLFVRNALVHFYGVS 194
Query: 132 GRMDLATVVFDAM-RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
G + VFD + RV+ TWN ++ GY+R G + A +FDEMPVRD ISW+ L+ G+
Sbjct: 195 GDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGY 254
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
VK E AL FR M GV P+ +++ L+A A +G L G ++H V + +
Sbjct: 255 VKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCM 314
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
V L+D+Y++CGC+ AR+VF M +R + +WN++I G A +G +A+E F E
Sbjct: 315 NVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISE 374
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
G P V+F G L CS +GL+ +G RYF ++ + YR+ P +EHYGC+VDL RAG + +
Sbjct: 375 GLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPE 434
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
A+ ++E M + P+ V+ G++L++C+T G + L + L++LDP YVLL+ +YA
Sbjct: 435 AIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAK 494
Query: 431 VGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFD 490
KWD ++R+ M RG K G S +E +H+F+ GD H +S IY L++++
Sbjct: 495 ANKWDEVREVRKLMSSRGTNKSAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKR 554
Query: 491 LKLCGYVPET 500
L GYVP+
Sbjct: 555 LTEAGYVPDV 564
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 36/258 (13%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V + W++ + + + + A F M G PN +T LS A L G
Sbjct: 241 VRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARL--GLLEHG 298
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H +V + G+ + VG AL+DMYAK G + +A VFD MR + F WNAMI
Sbjct: 299 KFVHNVVQRSGMP-VCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMI----- 352
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G G +A+E F G+ P VT + V
Sbjct: 353 --------------------------CGLAAHGLGRDAVELFERFISEGLSPTNVTFVGV 386
Query: 222 LNACANVGTLGIGLWIHRYVL-KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KR 279
LN C+ G + G + ++ K + ++ ++DL R G + A ++ + MH
Sbjct: 387 LNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAP 446
Query: 280 TLVSWNSIIVGFAVNGFV 297
V W +I+ +G V
Sbjct: 447 DPVLWGTILSSCKTHGLV 464
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 175/524 (33%), Positives = 284/524 (54%), Gaps = 71/524 (13%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I + EA + M L G P+ +TF++LL+ + + L +G +H
Sbjct: 163 VSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTN--PELLQVGQKVH 220
Query: 106 GLVCKLGLD------------------------------RNNVMVGTALLDMYAKFGRMD 135
+ K GL+ NV+ T L+ YA+ G++D
Sbjct: 221 MEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVD 280
Query: 136 LATVVFDAMR----------------------------------VKSSF---TW--NAMI 156
+A + + M+ ++S + W NA+I
Sbjct: 281 VALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALI 340
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
Y + G ++ A ++F ++P RD ++WTA++ G+ + G+ +EA++ FR MQ G++PD +
Sbjct: 341 TMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKM 400
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T S L +C++ L G IH+ ++ + +V + + L+ +Y++CG ++ AR VF +M
Sbjct: 401 TFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQM 460
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+R +V+W ++I G A +G EALEYF M+K+G KPD V+FT L+AC+H GL+E+G
Sbjct: 461 SERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGR 520
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
++F M Y + P +EHY C VDL RAG LE+A NV+ MP +P V G+LL+ACR
Sbjct: 521 KHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRI 580
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
D+ ER + ++ LDP D YV L+N+YAA G+++ A K+R+ M+ R + K+PG S
Sbjct: 581 HSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQS 640
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IE+ +H F D+SH E++ IY+ L L+ +K GYVP+T
Sbjct: 641 WIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDT 684
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 198/459 (43%), Gaps = 70/459 (15%)
Query: 27 TTPQISIQT--NNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFI 84
TTP +S N+ T+ + +S C+ GR+ EA M L GT F
Sbjct: 41 TTPTVSHDQLPGNAGFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFR 100
Query: 85 TLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM 144
LL CA S L G +H + K G+ N + T LL MYAK G
Sbjct: 101 GLLQECARLRS--LEQGREVHAAILKSGIQPNRYLENT-LLSMYAKCG------------ 145
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFR 204
+ A R+FD + R+ +SWTA++ FV EA +C+
Sbjct: 146 -------------------SLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYE 186
Query: 205 EMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
M+++G +PD VT +S+LNA N L +G +H + K + +V +L+ +Y++CG
Sbjct: 187 TMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCG 246
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
I A+ +F ++ ++ +V+W +I G+A G V ALE MQ+ P+ +++T L
Sbjct: 247 DISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQ 306
Query: 325 ACSHAGLIEDGLRYFDIM------KKIYRVSPRIEHY----------------------- 355
C+ +E G + + ++I+ V+ I Y
Sbjct: 307 GCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVT 366
Query: 356 -GCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
+V Y++ G ++A+++ M +KP+++ S L +C + + + + + LV
Sbjct: 367 WTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLV 426
Query: 412 DLDPGVDSNY-VLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+D L +MYA G D A + M R +
Sbjct: 427 HAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNV 465
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 161/430 (37%), Positives = 246/430 (57%), Gaps = 7/430 (1%)
Query: 77 NPNHITFITL-----LSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF 131
NP+ TF+ L+ S C FLG+ +H L K G ++ V AL+ Y
Sbjct: 136 NPHSFTFLLASISNHLNAAGPSASACSFLGSHVHALAVKAGAA-GDLFVRNALVHFYGVS 194
Query: 132 GRMDLATVVFDAM-RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
G + VFD + RV+ TWN ++ GY+R G + A +FDEMPVRD ISW+ L+ G+
Sbjct: 195 GDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGY 254
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
VK E AL FR M GV P+ +++ L+A A +G L G ++H V + +
Sbjct: 255 VKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCM 314
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
V L+D+Y++CGC+ AR+VF M +R + +WN++I G A +G +A+E F E
Sbjct: 315 NVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISE 374
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
G P V+F G L CS +GL+ +G RYF ++ + YR+ P +EHYGC+VDL RAG + +
Sbjct: 375 GLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPE 434
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
A+ ++E M + P+ V+ G++L++C+T G + L + L++LDP YVLL+ +YA
Sbjct: 435 AIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAK 494
Query: 431 VGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFD 490
KWD ++R+ M RG K G S +E +H+F+ GD H +S IY L++++
Sbjct: 495 ANKWDEVREVRKLMSSRGTNKSAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKR 554
Query: 491 LKLCGYVPET 500
L GYVP+
Sbjct: 555 LTEAGYVPDV 564
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 36/258 (13%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V + W++ + + + + A F M G PN +T LS A L G
Sbjct: 241 VRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARL--GLLEHG 298
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H +V + G+ + VG AL+DMYAK G + +A VFD MR + F WNAMI
Sbjct: 299 KFVHNVVQRSGMP-VCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMI----- 352
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G G +A+E F G+ P VT + V
Sbjct: 353 --------------------------CGLAAHGLGRDAVELFERFISEGLSPTNVTFVGV 386
Query: 222 LNACANVGTLGIGLWIHRYVL-KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KR 279
LN C+ G + G + ++ K + ++ ++DL R G + A ++ + MH
Sbjct: 387 LNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAP 446
Query: 280 TLVSWNSIIVGFAVNGFV 297
V W +I+ +G V
Sbjct: 447 DPVLWGTILSSCKTHGLV 464
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 167/466 (35%), Positives = 260/466 (55%), Gaps = 38/466 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I + ++G EA F +M G P +++ + L CA+ L G +H
Sbjct: 310 VSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGD--LERGRYVH 367
Query: 106 GLV--CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
L+ K+G D V V +L+ MY+K R+D+A VF ++ K+
Sbjct: 368 RLLDEKKIGFD---VSVMNSLISMYSKCKRVDIAASVFGNLKHKT--------------- 409
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
++W A++ G+ + G EAL F EMQ ++PD T++SV+
Sbjct: 410 ----------------VVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVIT 453
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
A A++ WIH ++ NV VC LID +++CG I+ AR++F M +R +++
Sbjct: 454 ALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVIT 513
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN++I G+ NG EAL+ FN MQ KP+ ++F + ACSH+GL+E+G+ YF+ MK
Sbjct: 514 WNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMK 573
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ Y + P ++HYG +VDL RAGRL+DA +++MP+KP VLG++L ACR ++ L
Sbjct: 574 ENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELG 633
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E+ L DLDP +VLLANMYA+ WD ++R M+ +GIQK PG S +E+ +
Sbjct: 634 EKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNE 693
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
+H F +G +H +S+ IY+ LE L ++K GYVP+T + E D
Sbjct: 694 VHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSIHDVEED 739
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 208/455 (45%), Gaps = 92/455 (20%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + ++ + ++G A +M G P+ IT +++L AD + L +G IH
Sbjct: 209 VSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADL--KALRIGRSIH 266
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G + G + MV A AM+D Y + G +
Sbjct: 267 GYAFRAGFE---YMVNVA-----------------------------TAMLDTYFKCGSV 294
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
SA +F M R+ +SW +++G+ + G EEA F +M GVEP V+++ L+AC
Sbjct: 295 RSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHAC 354
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN+G L G ++HR + ++ +V V N+LI +YS+C ++ A VF + +T+V+WN
Sbjct: 355 ANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWN 414
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC------------------- 326
++I+G+A NG V EAL F MQ KPD + +TA
Sbjct: 415 AMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRT 474
Query: 327 --------------SHA--GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
+HA G I+ + FD+M++ + ++ + ++D Y G +
Sbjct: 475 LMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVIT-----WNAMIDGYGTNGHGRE 529
Query: 371 AL---NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL------VDLDPGVDSNY 421
AL N ++N +KPNE+ S++AAC G L E M Y L+P +D +Y
Sbjct: 530 ALDLFNEMQNGSVKPNEITFLSVIAACSHSG---LVEEGMYYFESMKENYGLEPTMD-HY 585
Query: 422 VLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
+ ++ G+ D A K + M KPG++
Sbjct: 586 GAMVDLLGRAGRLDDAWKFIQDMP-----VKPGIT 615
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 137/249 (55%), Gaps = 5/249 (2%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F A+++ Y + IE A +MF+ MP RD +SW ++ G+ + G+ A++ +MQ +
Sbjct: 178 FAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEA 237
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G +PD +T++SVL A A++ L IG IH Y + F+ V V ++D Y +CG + A
Sbjct: 238 GQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSA 297
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
R VF+ M R +VSWN++I G+A NG EA F M EG +P VS GAL AC++
Sbjct: 298 RLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANL 357
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEV 385
G +E G RY + ++ + ++ +YS+ R++ A +V N+ K N +
Sbjct: 358 GDLERG-RYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAM 416
Query: 386 VLGSLLAAC 394
+LG C
Sbjct: 417 ILGYAQNGC 425
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 139/329 (42%), Gaps = 34/329 (10%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+I + + I A R+F+ + + + + +L G+ K +A+ + M+ V P
Sbjct: 82 LISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPV 141
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+L L G IH V+ F+ N+ +++LY++C IE A ++F+
Sbjct: 142 VYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFE 201
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS------- 327
RM +R LVSWN+++ G+A NGF A++ MQ+ G KPD ++ L A +
Sbjct: 202 RMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRI 261
Query: 328 ----HAGLIEDGLRY--------FDIMKKIYRV-----------SPRIEHYGCIVDLYSR 364
H G Y D K V S + + ++D Y++
Sbjct: 262 GRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQ 321
Query: 365 AGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
G E+A M ++P V + L AC GD+ + + L + G D +
Sbjct: 322 NGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSV 381
Query: 422 V-LLANMYAAVGKWDGAGKIRRTMKGRGI 449
+ L +MY+ + D A + +K + +
Sbjct: 382 MNSLISMYSKCKRVDIAASVFGNLKHKTV 410
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 93/207 (44%), Gaps = 7/207 (3%)
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
++K F + LI L+ + I A +VF+ + + V +++++ G+A N + +A
Sbjct: 67 IIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDA 126
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
+ ++ M+ + P FT L + G R M + +V+
Sbjct: 127 VRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRG-REIHGMVITNGFQSNLFAMTAVVN 185
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL-DPGVDS 419
LY++ ++EDA + E MP + + V +++A G A R ++ ++ + + G
Sbjct: 186 LYAKCRQIEDAYKMFERMPQR-DLVSWNTVVAGYAQNG---FARRAVQVVLQMQEAGQKP 241
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKG 446
+ + L ++ AV A +I R++ G
Sbjct: 242 DSITLVSVLPAVADLK-ALRIGRSIHG 267
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/394 (39%), Positives = 253/394 (64%), Gaps = 3/394 (0%)
Query: 105 HGLVCKLG-LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
H L+ KLG ++ + +AL+ YAK + A VFD + + + +NA++ Y + G
Sbjct: 108 HSLLIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGG 167
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVL 222
++SA ++F+EMP R+ +SWTA+++G+ + G EEA+E F EM + +GV+P+ +T+ SVL
Sbjct: 168 LVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVL 227
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTL 281
ACA VG + +G + Y + NV V N L+++YS+CG I A QVFQ + ++ L
Sbjct: 228 PACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDL 287
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
SWNS+I+ FAV+G EAL F ++ G KPDG++F G + AC+H GL+ +G +FD
Sbjct: 288 CSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDS 347
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M+ + + PRIEHYGC+VDL RAG L ++ +++ +MP++P+ V+ G+LL AC G++
Sbjct: 348 MEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVE 407
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LAE M L+ L+P +N V+L+N+YA+ GKWDG ++ + +K + +K G S IE+
Sbjct: 408 LAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFIELD 467
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCG 495
+H+F+ D+SH E +Y+ L ++ +KL G
Sbjct: 468 GTMHKFLVEDKSHPRFEEVYNTLNSVTMTMKLVG 501
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 35/224 (15%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V WT+ +S + ++GR EA F M G PN +T ++L CA + + LG
Sbjct: 184 VVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPACAAVGA--MELGRK 241
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+ GL R NV V ALL+MY+K G + A VF G R+
Sbjct: 242 VEEYARGKGLLR-NVYVANALLEMYSKCGSIRQAWQVF---------------QGIGRQQ 285
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+ SW +++ F G + EAL F +++++GV+PD +T + V+
Sbjct: 286 DL---------------CSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVIL 330
Query: 224 ACANVGTLGIG-LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
AC + G + G L+ + K ++ ++DL R G +
Sbjct: 331 ACTHGGLVNEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLL 374
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 176/445 (39%), Positives = 257/445 (57%), Gaps = 11/445 (2%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGT--NPNHITFITLLSGCADFPSQCLFLGAMIH 105
+T+ I+ + +AL R L PNH F L C P C +H
Sbjct: 73 FTAMITAYAAHPATHPSALSLFRHMLRSQPPRPNHFIFPHALKTC---PESCA--AESLH 127
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKF-GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ K G V V TAL+D Y+K G + A VFD M +S ++ AM+ G+ R GD
Sbjct: 128 AQIVKSGFHEYPV-VQTALVDSYSKVSGGLGNAKKVFDEMSDRSVVSFTAMVSGFARVGD 186
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ESAVR+F EM RD SW AL+ G + G F + +E FR M P+ VT++ L+A
Sbjct: 187 VESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECNRPNGVTVVCALSA 246
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C ++G L +G WIH YV K + V N L+D+Y +CG + AR+VF+ ++ L SW
Sbjct: 247 CGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKARKVFEMNPEKGLTSW 306
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEG--FKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
NS+I FA++G A+ F M + G +PD V+F G L AC+H GL+E G YF++M
Sbjct: 307 NSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNACTHGGLVEKGYWYFEMM 366
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+ Y + P+IEHYGC++DL RAGR ++A++VV+ M M+P+EVV GSLL C+ G L
Sbjct: 367 VQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDL 426
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
AE K L+++DP ++LAN+Y +GKWD + RT+K + K PG S IE+
Sbjct: 427 AEFAAKKLIEIDPHNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKSYKVPGCSWIEVDD 486
Query: 463 GIHEFMAGDRSHIESEHIYSMLELL 487
+H+F + D+S+ ++E +Y +LE L
Sbjct: 487 QVHQFYSLDKSNPKTEDLYIVLESL 511
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 168/473 (35%), Positives = 279/473 (58%), Gaps = 8/473 (1%)
Query: 31 ISIQTNNSKSTVNPT-VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSG 89
+ I + KS + P V W +S RSG EA + F +M G P+ +T ++L
Sbjct: 202 VRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPS 261
Query: 90 CADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS 149
D S+ L +G IHG V K GL ++ ++ +A+LDMY K G + +FD + +
Sbjct: 262 VGD--SENLNMGRQIHGYVIKQGLLKDKCVI-SAMLDMYGKSGHVYGIIKLFDEFEMMET 318
Query: 150 FTWNAMIDGYMRRGDIESAVRMF----DEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
NA I G R G ++ A+ MF ++ + +SWT+++ G + G EALE FRE
Sbjct: 319 GVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFRE 378
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
MQ++GV+P+ VTI S+L AC N+ LG G H + ++ D+V V + LID+Y++CG
Sbjct: 379 MQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGR 438
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
I+ ++ VF M + LV WNS++ G++++G E + F S+ + KPD +SFT L+A
Sbjct: 439 IKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSA 498
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
C GL ++G +YF++M + Y + PR+EHY C+V+L RAG+L++A ++++ +P +P+
Sbjct: 499 CGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSC 558
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
V G+LL +CR + ++ LAE + L L+P YVL++N+YAA G W IR M+
Sbjct: 559 VWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKME 618
Query: 446 GRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
G++K PG S I++ + ++ +A D+SH + + I ++ +S +++ G+ P
Sbjct: 619 SLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRP 671
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 189/395 (47%), Gaps = 49/395 (12%)
Query: 39 KSTVNPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
+S +PTV ++S I ++ +++ F+RM HG P+ L CA+ +
Sbjct: 74 QSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSA-- 131
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
G IH + C GLD + + G+ L MY + GRM A VFD M K T +A++
Sbjct: 132 FKAGKQIHCVACVSGLDMDAFVQGS-LFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLC 190
Query: 158 GYMRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEP 213
GY R+G +E VR+ EM + +SW +L+GF + GY +EA+ F++M G P
Sbjct: 191 GYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCP 250
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLY------------- 260
D VT+ SVL + + L +G IH YV+KQ + V + ++D+Y
Sbjct: 251 DQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLF 310
Query: 261 ------------------SRCGCIEFARQVF-----QRMHKRTLVSWNSIIVGFAVNGFV 297
SR G ++ A ++F Q+M + +VSW SII G A NG
Sbjct: 311 DEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKM-ELNVVSWTSIIAGCAQNGKD 369
Query: 298 GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG- 356
EALE F MQ G KP+ V+ L AC + + G +++ + H G
Sbjct: 370 IEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDV--HVGS 427
Query: 357 CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLL 391
++D+Y++ GR++ + V MP K N V SL+
Sbjct: 428 ALIDMYAKCGRIKMSQIVFNMMPTK-NLVCWNSLM 461
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+I Y A + +P S+++L+ K F +++ F M G+ PD
Sbjct: 56 LIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPD 115
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+ ++ CA + G IH + V +L +Y RCG + AR+VF
Sbjct: 116 THVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFD 175
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
RM ++ +V+ ++++ G+A G + E + + M+K G +P+ VS+ G L+ + +G ++
Sbjct: 176 RMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKE 235
Query: 335 GLRYFDIMKKI 345
+ F M +
Sbjct: 236 AVIMFQKMHHL 246
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 18/192 (9%)
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
H +LK +++ + LI YS C A + Q + T+ S++S+I
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLF 97
Query: 298 GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP----RIE 353
+++ F+ M G PD C+ L F K+I+ V+ ++
Sbjct: 98 SQSIGVFSRMFSHGLIPDTHVLPNLFKVCAE-------LSAFKAGKQIHCVACVSGLDMD 150
Query: 354 HY--GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
+ G + +Y R GR+ DA V + M K + V +LL KG + E +++ L
Sbjct: 151 AFVQGSLFHMYMRCGRMGDARKVFDRMSEK-DVVTCSALLCGYARKGCL---EEVVRILS 206
Query: 412 DLDP-GVDSNYV 422
+++ G++ N V
Sbjct: 207 EMEKSGIEPNIV 218
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 240/387 (62%), Gaps = 2/387 (0%)
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
L+++ V T LLD Y K G ++ A +F M ++ +W+ ++ GY ++GD+E A +F
Sbjct: 212 LEKDTVSWNT-LLDGYTKAGDVEEAFKLFQCMPERNVVSWSTVVSGYCKKGDMEMARVIF 270
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
D+MP ++ ++WT +++ + G EEA + F +M+ + VE D ++S+L ACA G+L
Sbjct: 271 DKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVAAVVSILAACAESGSLA 330
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ-RMHKRTLVSWNSIIVGF 291
+G IHRYV + + VCN LID++ +CGCI A VF + ++ VSWN+II GF
Sbjct: 331 LGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADYVFDTEIVEKDSVSWNTIIGGF 390
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR 351
A++G +AL++F M+ +GF PD V+ L+AC+H G +E+G RYF M++ Y V P+
Sbjct: 391 AMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFVEEGRRYFANMERDYGVVPQ 450
Query: 352 IEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
IEHYGC++DL R G +++A++++++MP PNEV+ GSLL+ACR ++ AE + L
Sbjct: 451 IEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAVNELS 510
Query: 412 DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGD 471
L P NY +L+++YA GKW K R MKG G QK G S IE+ HEF GD
Sbjct: 511 KLQPSNAGNYAVLSSIYAEAGKWSDMAKARMQMKGTGSQKSSGSSWIELDEAFHEFTVGD 570
Query: 472 RSHIESEHIYSMLELLSFDLKLCGYVP 498
R H +S+ I M++ LS K VP
Sbjct: 571 RKHPDSDQISEMVDRLSSHAKDVDCVP 597
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 135/317 (42%), Gaps = 53/317 (16%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR--VKSSFTWNAMIDGYMR 161
+H + K GL + V + LL YA R+ + VF + ++F N ++ Y
Sbjct: 43 LHAQLLKHGLHLDPV-AASKLLSSYALHRRLPASRGVFASFPNPHATTFLPNTLLRAYAL 101
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
AV +F MP RD+ +++ L+ + + +GV P
Sbjct: 102 NALPREAVAVFSAMPHRDSFTYSFLI----------------KALSSAGVAP-------- 137
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L A +H +V+K ++ V N LID YS+ G A +VF+ M +R +
Sbjct: 138 LRA------------VHSHVVKLGSIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDV 185
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSWNS + G V A F+ M + D VS+ L + AG +E+ + F
Sbjct: 186 VSWNSAMAAMVRQGEVEGARRMFDEM----LEKDTVSWNTLLDGYTKAGDVEEAFKLFQC 241
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M + VS + +V Y + G +E A + + MP K N V +++AC G +
Sbjct: 242 MPERNVVS-----WSTVVSGYCKKGDMEMARVIFDKMPTK-NLVTWTIMVSACAQNGLVE 295
Query: 402 LAERLMKYL----VDLD 414
A +L + V+LD
Sbjct: 296 EAGKLFTQMKEASVELD 312
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 125/249 (50%), Gaps = 37/249 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ +S +C+ G + A + F +M N +T+ ++S CA +
Sbjct: 248 VSWSTVVSGYCKKGDMEMARVIFDKM----PTKNLVTWTIMVSACAQ------------N 291
Query: 106 GLVCKLG-----LDRNNVMVGTA----LLDMYAKFGRMDLATVVFDAMRV----KSSFTW 152
GLV + G + +V + A +L A+ G + L + +R +S+
Sbjct: 292 GLVEEAGKLFTQMKEASVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVC 351
Query: 153 NAMIDGYMRRGDIESAVRMFD-EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV 211
NA+ID + + G I A +FD E+ +D++SW ++ GF G+ ++AL+ F +M++ G
Sbjct: 352 NALIDMFCKCGCINRADYVFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGF 411
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYV--LKQDFK--DNVKVCNTLIDLYSRCGCIE 267
PD VT+I+VL+AC ++G + G RY +++D+ ++ +IDL R G I+
Sbjct: 412 CPDAVTMINVLSACTHMGFVEEG---RRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIK 468
Query: 268 FARQVFQRM 276
A + + M
Sbjct: 469 EAVDLIKSM 477
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 262/458 (57%), Gaps = 5/458 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + IS + G EA F +M + + TF +++S CA+ + C LG +H
Sbjct: 255 VAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCAN--AGCFRLGKEMH 312
Query: 106 GLVCKLGLDRN---NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
K + + V AL+ Y K G++D+A +F+ M + +WN ++ GY+
Sbjct: 313 AYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNV 372
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
++ A F+EMP ++ +SW +++G + G+ EEAL+ F M++ G EP +
Sbjct: 373 RCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAI 432
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+C+ +G+L G +H V++ ++ ++ N LI +Y+RCG ++ A +F M +
Sbjct: 433 ISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAI 492
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN++I +G +A+E F M KEG PD +SF ++ACSHAGL+++G +YFD M
Sbjct: 493 SWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSM 552
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+Y V+P EHY I+DL RAG+ +A V+E+MP +P + +LLA CR G+I L
Sbjct: 553 HNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDL 612
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
+ L +L P D YVLL+NMYA G+W+ K+R+ M+ RG++K+PG S IE+ +
Sbjct: 613 GIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVEN 672
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F+ GD +H E IY+ LE L +++ GYVP+T
Sbjct: 673 KVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDT 710
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 166/365 (45%), Gaps = 54/365 (14%)
Query: 63 EAALE-FTRMTLHGTNPNHITFITLLSG---CADFPSQCLFLGAMIHGLVCKLGLDRNNV 118
AA+E F M P++ TF ++L A+ C +H V K G
Sbjct: 129 HAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHC----QQLHCAVVKSGTGFVTS 184
Query: 119 MVGTALLDMYAKFGR---------MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAV 169
++ AL+ Y K M A +FD M + +W +I GY++ D+++A
Sbjct: 185 VL-NALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAK 243
Query: 170 RMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVG 229
+ + ++W A+++G+ RG + EA E FR+M +S ++ D T SV++ CAN G
Sbjct: 244 EFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAG 303
Query: 230 TLGIGLWIHRYVLKQDFKD----NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+G +H Y LK + V N LI Y +CG ++ A+++F +M +R LVSWN
Sbjct: 304 CFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWN 363
Query: 286 SIIVGF-------------------------------AVNGFVGEALEYFNSMQKEGFKP 314
I+ G+ A GF EAL++FN M+ +GF+P
Sbjct: 364 IILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEP 423
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
+F GA+ +CS G ++ G R Y + ++ +Y+R G ++ A +
Sbjct: 424 CDYAFAGAIISCSVLGSLKHG-RQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCL 482
Query: 375 VENMP 379
NMP
Sbjct: 483 FINMP 487
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 153/379 (40%), Gaps = 62/379 (16%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV--RDAI 181
L+D+Y+K +++ A +FD + +I Y GD++ + ++F + P+ RD++
Sbjct: 54 LIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSV 113
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL-WIHRY 240
+ A++ + A+E F +MQ PD T SVL A A V +H
Sbjct: 114 FYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCA 173
Query: 241 VLKQDFKDNVKVCNTLIDLYSRC---------GCIEFARQVFQRM--------------- 276
V+K V N LI Y +C + AR++F M
Sbjct: 174 VVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGY 233
Query: 277 ----------------HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT 320
K+ V+WN++I G+A G EA E F M + D +FT
Sbjct: 234 VKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFT 293
Query: 321 GALTACSHAGLIEDGLR---YFDIMKKIYRVSPRIEH--YGCIVDLYSRAGRLEDALNVV 375
++ C++AG G YF +K + +P + ++ Y + G+++ A +
Sbjct: 294 SVISVCANAGCFRLGKEMHAYF--LKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIF 351
Query: 376 ENMPMKP----NEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAV 431
MP + N ++ G + C + E K ++ +++++ + A +
Sbjct: 352 NKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNIL--------SWIIMISGLAQI 403
Query: 432 GKWDGAGKIRRTMKGRGIQ 450
G + A K MK +G +
Sbjct: 404 GFAEEALKFFNRMKLQGFE 422
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR--MHK 278
+LN ++ + L RY+ + + ++ TLI YS G ++ +R++F +
Sbjct: 50 ILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGM 109
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
R V +N++I ++ N A+E F MQ++ F+PD +FT L A
Sbjct: 110 RDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGA 156
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 174/451 (38%), Positives = 269/451 (59%), Gaps = 12/451 (2%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ RM H +P+ TF LL + P L LG H + GLD++ V T+LL+M
Sbjct: 49 YFRMRHHCVSPDFHTFPFLLPSFHN-PIH-LPLGQRTHAQILLFGLDKDP-FVRTSLLNM 105
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y+ G + A +FD K WN++++ Y + G I A ++FDEMP R+ ISW+ L+
Sbjct: 106 YSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLI 165
Query: 188 NGFVKRGYFEEALECFREMQISG-----VEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
NG+V G ++EAL+ FREMQ+ V P+ T+ +VL+AC +G L G W+H Y+
Sbjct: 166 NGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYID 225
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFVGEAL 301
K + ++ + LID+Y++CG +E A++VF + K+ + +++++I A+ G E
Sbjct: 226 KYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECF 285
Query: 302 EYFNSMQ-KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
+ F+ M P+ V+F G L AC H GLI G YF +M + + ++P I+HYGC+VD
Sbjct: 286 QVFSEMTTSNNINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVD 345
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
LY R+G +++A + + +MPM+P+ ++ GSLL+ R GDI E +K L++LDP
Sbjct: 346 LYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGA 405
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHI 480
YVLL+N+YA G+W +IR M+ +GI+K PG S +E+ +HEF+ GD S ESE I
Sbjct: 406 YVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVPGCSYVEVEGVVHEFVVGDESQQESERI 465
Query: 481 YSMLELLSFDLKLCGYVPET--VAGELYEND 509
Y+MLE + L+ GYV +T V +L E D
Sbjct: 466 YAMLEEIMQRLREAGYVSDTKEVLLDLEEKD 496
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 185/532 (34%), Positives = 285/532 (53%), Gaps = 49/532 (9%)
Query: 14 FLPHQQNPNQNLTT--------TPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAA 65
+L QNP+ + P ++ + + S N V + I + + R +
Sbjct: 46 YLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRN-VVFYNVMIRSYVNNHRYDDGL 104
Query: 66 LEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALL 125
L F M G P++ T+ +L C+ S+ L G +IHG V K+GLD N + VG L+
Sbjct: 105 LVFREMVNGGFRPDNYTYPCVLKACS--CSENLRYGLLIHGDVLKVGLDFN-LFVGNGLI 161
Query: 126 DMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY---MRRGDIESAVRMFDE-------- 174
MY K G + A VFD M K +WN+M+ GY MR D R ++
Sbjct: 162 AMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGC 221
Query: 175 -----MPV---------------------RDAISWTALLNGFVKRGYFEEALECFREMQI 208
MP ++ ISW ++ ++K +A++ + +M+
Sbjct: 222 TMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEK 281
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
VEPD +T SVL AC ++ L +G IH YV K+ N+ + N+LID+Y+RCGC++
Sbjct: 282 CRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDD 341
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
A++VF RM R + SW S+I + + G A+ F M G PD ++F L+ACSH
Sbjct: 342 AKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSH 401
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
+GL+++G YF M YR++PRIEHY C+VDL RAGR+++A N+++ MP++PNE V
Sbjct: 402 SGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWA 461
Query: 389 SLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
+LL++CR ++ + L+ L P YVLL+N+YA G+W +IR MK +
Sbjct: 462 TLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKK 521
Query: 449 IQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I+K PG+S++E+ + +H F+AGD SH +S+ IY L +L +K GYVPET
Sbjct: 522 IRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPET 573
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 75/195 (38%), Gaps = 43/195 (22%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H + + N + L+ Y+ CG R+VF M R +V +N +I + N
Sbjct: 40 LHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHR 99
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGL--------- 336
+ L F M GF+PD ++ L ACS H +++ GL
Sbjct: 100 YDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNG 159
Query: 337 ---------------RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV---VENM 378
R FD M + + + +V Y+ R +DAL + +E+
Sbjct: 160 LIAMYGKCGCLFEARRVFDEM-----IWKDVVSWNSMVAGYAHNMRFDDALEICREMEDY 214
Query: 379 PMKPNEVVLGSLLAA 393
KP+ + SL+ A
Sbjct: 215 GQKPDGCTMASLMPA 229
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 177/463 (38%), Positives = 262/463 (56%), Gaps = 37/463 (7%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ +F ++ +F S L G +H K GL+ +++ VGT L+ MY G ++ A
Sbjct: 104 PDSFSFAFVIKAVENFRS--LRTGFQMHCQALKHGLE-SHLFVGTTLIGMYGGCGCVEFA 160
Query: 138 TVVFDAMR-------------------------------VKSSFTWNAMIDGYMRRGDIE 166
VFD M V++ +WN M+ GY++ G++E
Sbjct: 161 RKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELE 220
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
SA R+F EMP RD +SW+ ++ G G F E+ FRE+Q +G+ P+ V++ VL+AC+
Sbjct: 221 SAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACS 280
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSWN 285
G+ G +H +V K + V V N LID+YSRCG + AR VF+ M KR +VSW
Sbjct: 281 QSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWT 340
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S+I G A++G EA+ FN M G PDG+SF L ACSHAGLIE+G YF MK++
Sbjct: 341 SMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRV 400
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P IEHYGC+VDLY R+G+L+ A + + MP+ P +V +LL AC + G+I LAE+
Sbjct: 401 YHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQ 460
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ + L +LDP + VLL+N YA GKW IR++M + I+K S +E+G ++
Sbjct: 461 VKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMY 520
Query: 466 EFMAGDRSH-IESEHIYSMLELLSFDLKLCGYVPETVAGELYE 507
+F AG++ I+ E + E++ GY PE VA LY+
Sbjct: 521 KFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPE-VASALYD 562
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 115/239 (48%), Gaps = 12/239 (5%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ I +G E+ L F + G +PN ++ +LS C+ S G ++H
Sbjct: 235 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQ--SGSFEFGKILH 292
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF-TWNAMIDGYMRRGD 164
G V K G V V AL+DMY++ G + +A +VF+ M+ K +W +MI G G
Sbjct: 293 GFVEKAGYSW-IVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQ 351
Query: 165 IESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTII 219
E AVR+F+EM D IS+ +LL+ G EE + F EM+ + +EP+
Sbjct: 352 GEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYG 411
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+++ G L + ++ + V TL+ S G IE A QV QR+++
Sbjct: 412 CMVDLYGRSGKLQKA---YDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNE 467
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 131/329 (39%), Gaps = 49/329 (14%)
Query: 90 CADFPSQCLFLGAM--IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK 147
C + C L A+ IHGL K G+D ++ G +L A + DA+
Sbjct: 8 CLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLIL---------HCAISISDAL--- 55
Query: 148 SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ 207
Y R R+ P DA + L+ G+ + ++ F EM
Sbjct: 56 ----------PYAR--------RLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMM 97
Query: 208 ISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
G V PD + V+ A N +L G +H LK + ++ V TLI +Y CGC+
Sbjct: 98 RKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCV 157
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
EFAR+VF MH+ LV+WN++I V A E F+ M V G +
Sbjct: 158 EFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIK-- 215
Query: 327 SHAGLIEDGLRYFDIMKKIYRVSPR-----IEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
AG +E R F M VS I H G + + L+ A M
Sbjct: 216 --AGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRA-------GMS 266
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYL 410
PNEV L +L+AC G + L ++
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFV 295
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 183/471 (38%), Positives = 269/471 (57%), Gaps = 15/471 (3%)
Query: 39 KSTVNPT-VQWTSSISRHCRSGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQ 96
+ T +PT V +TS+I H G A + M L HG P T L C
Sbjct: 86 RRTPDPTAVFYTSAIHAHSSRGLHHAALALLSEMLLSHGLLPTAHTLSASLPACGG---- 141
Query: 97 CLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF-TWNAM 155
L +G +HG KL L V TALL MYA+ G A V+FD M+ + AM
Sbjct: 142 -LAVGRALHGYAVKLALS-GEPYVATALLGMYARAGDAAAARVLFDGMQPDPHVVSVTAM 199
Query: 156 IDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
+ Y + G ++ A +FD +P +D I W A+++G+ + G EAL FR M SGVEPD
Sbjct: 200 LTCYAKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDE 259
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKD---NVKVCNTLIDLYSRCGCIEFARQV 272
V+++ L+A A +GT G W+H +V + N +V LID+Y +CG +E A V
Sbjct: 260 VSVVLALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAV 319
Query: 273 FQRMHK--RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
F + R +V+WN+++ G+A++G EAL F ++ +G P ++F G L ACSH+G
Sbjct: 320 FGDLGAGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSG 379
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP-MKPNEVVLGS 389
L+++G F M + Y + P++EHYGC+VDL RAGR+E+A +V++M KP+ V+ S
Sbjct: 380 LVDEGRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAVMWAS 439
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
LLAACR ++ L +R+ +LV YVLL+NMYAA G W G++R M+ GI
Sbjct: 440 LLAACRLHKNMELGQRIADHLVANGLANSGTYVLLSNMYAAAGNWREVGRVRAMMRASGI 499
Query: 450 QKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
QK+PG S++E+G + EF+AGDRSH + IY+ LE ++ + G+VP T
Sbjct: 500 QKEPGCSAVEVGRRVVEFVAGDRSHPRAAEIYAKLEEVNGMARARGHVPRT 550
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 177/463 (38%), Positives = 262/463 (56%), Gaps = 37/463 (7%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ +F ++ +F S L G +H K GL+ +++ VGT L+ MY G ++ A
Sbjct: 96 PDSFSFAFVIKAVENFRS--LRTGFQMHCQALKHGLE-SHLFVGTTLIGMYGGCGCVEFA 152
Query: 138 TVVFDAMR-------------------------------VKSSFTWNAMIDGYMRRGDIE 166
VFD M V++ +WN M+ GY++ G++E
Sbjct: 153 RKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELE 212
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
SA R+F EMP RD +SW+ ++ G G F E+ FRE+Q +G+ P+ V++ VL+AC+
Sbjct: 213 SAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACS 272
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSWN 285
G+ G +H +V K + V V N LID+YSRCG + AR VF+ M KR +VSW
Sbjct: 273 QSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWT 332
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S+I G A++G EA+ FN M G PDG+SF L ACSHAGLIE+G YF MK++
Sbjct: 333 SMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRV 392
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P IEHYGC+VDLY R+G+L+ A + + MP+ P +V +LL AC + G+I LAE+
Sbjct: 393 YHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQ 452
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ + L +LDP + VLL+N YA GKW IR++M + I+K S +E+G ++
Sbjct: 453 VKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMY 512
Query: 466 EFMAGDRSH-IESEHIYSMLELLSFDLKLCGYVPETVAGELYE 507
+F AG++ I+ E + E++ GY PE VA LY+
Sbjct: 513 KFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPE-VASALYD 554
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 115/239 (48%), Gaps = 12/239 (5%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ I +G E+ L F + G +PN ++ +LS C+ S G ++H
Sbjct: 227 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQ--SGSFEFGKILH 284
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF-TWNAMIDGYMRRGD 164
G V K G V V AL+DMY++ G + +A +VF+ M+ K +W +MI G G
Sbjct: 285 GFVEKAGYSW-IVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQ 343
Query: 165 IESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTII 219
E AVR+F+EM D IS+ +LL+ G EE + F EM+ + +EP+
Sbjct: 344 GEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYG 403
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+++ G L + ++ + V TL+ S G IE A QV QR+++
Sbjct: 404 CMVDLYGRSGKLQKA---YDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNE 459
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 133/333 (39%), Gaps = 52/333 (15%)
Query: 84 ITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDA 143
++LL+ C + + IHGL K G+D ++ G +L A + DA
Sbjct: 1 LSLLNSCKNLRAL-----TQIHGLFIKYGVDTDSYFTGKLIL---------HCAISISDA 46
Query: 144 MRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF 203
+ Y R R+ P DA + L+ G+ + ++ F
Sbjct: 47 L-------------PYAR--------RLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVF 85
Query: 204 REMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
EM G V PD + V+ A N +L G +H LK + ++ V TLI +Y
Sbjct: 86 VEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGG 145
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
CGC+EFAR+VF MH+ LV+WN++I V A E F+ M V G
Sbjct: 146 CGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGY 205
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPR-----IEHYGCIVDLYSRAGRLEDALNVVEN 377
+ AG +E R F M VS I H G + + L+ A
Sbjct: 206 IK----AGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRA------ 255
Query: 378 MPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
M PNEV L +L+AC G + L ++
Sbjct: 256 -GMSPNEVSLTGVLSACSQSGSFEFGKILHGFV 287
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 169/453 (37%), Positives = 265/453 (58%), Gaps = 4/453 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + I + G I F M HG P+ T + LL C L G +H
Sbjct: 195 VSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKL--GKSVH 252
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K + +N+++ ALLDMY K + LA VFD K + +WN +I GY + G++
Sbjct: 253 AQIEK-SIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGEL 311
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A +F+++P RD +SW +L++G+ + G + F M V+PD VTI+++++A
Sbjct: 312 ELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAV 371
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A +G L G WIH +K K + LID+Y +CG IE A +F ++ ++ + +W
Sbjct: 372 AEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWT 431
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I GFA +GF +ALE F+ MQ E KP+ V+F L ACSH+GL+++GL+ F MKK
Sbjct: 432 TMITGFAFHGFGNKALELFSVMQAET-KPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKR 490
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P +EHYGC+VDL R+GRL DA+ V+E MPM+P+ + G++L+ACR ++ LAER
Sbjct: 491 YSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAER 550
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ L+ L+P + Y+LL+N+YA G+W + IR M RG++K G SS+ + +H
Sbjct: 551 ALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVAVDGMVH 610
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+F A ++ H I S+L L+ +++L VP
Sbjct: 611 DFTASNKQHPRWMDICSILSFLTNEMRLEADVP 643
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 169/399 (42%), Gaps = 75/399 (18%)
Query: 114 DRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
DR + A+ ++ +VF + K + N++I Y+ G E A ++FD
Sbjct: 129 DRQTFLYLLQTTKFVAEVKQIHCHALVFGLLS-KEEYLRNSLIKRYVDNGCFECARQLFD 187
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI 233
EM R+ +S+ ++ GF K G LE F +M+ G+EPD T++ +L C +G +
Sbjct: 188 EMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKL 247
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV 293
G +H + K N+ + N L+D+Y +C ++ AR+VF ++ VSWN+II G+A
Sbjct: 248 GKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAK 307
Query: 294 NGFVGEALEYFNS-------------------------------MQKEGFKPDGVSFTGA 322
G + A + FN M E KPD V+
Sbjct: 308 VGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNL 367
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMP- 379
++A + G ++ G + K+ +IE + ++D+Y + G +E A + +P
Sbjct: 368 ISAVAEMGALDQGRWIHGLAVKML---TKIEAFSGSALIDMYCKCGSIERAFVIFNQIPE 424
Query: 380 --------------------------------MKPNEVVLGSLLAACRTKGDIILAERL- 406
KPN+V S+LAAC G + ++
Sbjct: 425 KDVTTWTTMITGFAFHGFGNKALELFSVMQAETKPNDVTFVSVLAACSHSGLVDEGLKIF 484
Query: 407 --MKYLVDLDPGVDSNYVLLANMYAAVGK-WDGAGKIRR 442
MK ++PGV+ +Y L ++ G+ D G I +
Sbjct: 485 SSMKKRYSIEPGVE-HYGCLVDLLCRSGRLLDAIGVIEK 522
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 19/247 (7%)
Query: 164 DIESAVRMFDEM-PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
++E A+ +F+ P + + ++ GF E+A +R M +G PD T + +L
Sbjct: 80 NLELAILLFNHFTPYPNLYIFNTMILGFPFSN--EKAFTIYRSMLQNGTYPDRQTFLYLL 137
Query: 223 NA---CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
A V + + + K+++ + N+LI Y GC E ARQ+F M R
Sbjct: 138 QTTKFVAEVKQIHCHALVFGLLSKEEY-----LRNSLIKRYVDNGCFECARQLFDEMSDR 192
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL--- 336
+VS+N++I+GFA G + LE F+ M+ G +PD FT L E L
Sbjct: 193 NVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPD--DFTMLGLLLLCGQLGETKLGKS 250
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+ I K I S + Y ++D+Y + L+ A V + PM+ + V +++A
Sbjct: 251 VHAQIEKSIG--SSNLILYNALLDMYVKCNELKLARKVFDG-PMEKDTVSWNTIIAGYAK 307
Query: 397 KGDIILA 403
G++ LA
Sbjct: 308 VGELELA 314
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 169/453 (37%), Positives = 265/453 (58%), Gaps = 4/453 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + I + G I F M HG P+ T + LL C L G +H
Sbjct: 130 VSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKL--GKSVH 187
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K + +N+++ ALLDMY K + LA VFD K + +WN +I GY + G++
Sbjct: 188 AQIEK-SIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGEL 246
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A +F+++P RD +SW +L++G+ + G + F M V+PD VTI+++++A
Sbjct: 247 ELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAV 306
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A +G L G WIH +K K + LID+Y +CG IE A +F ++ ++ + +W
Sbjct: 307 AEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWT 366
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I GFA +GF +ALE F+ MQ E KP+ V+F L ACSH+GL+++GL+ F MKK
Sbjct: 367 TMITGFAFHGFGNKALELFSVMQAET-KPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKR 425
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P +EHYGC+VDL R+GRL DA+ V+E MPM+P+ + G++L+ACR ++ LAER
Sbjct: 426 YSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAER 485
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ L+ L+P + Y+LL+N+YA G+W + IR M RG++K G SS+ + +H
Sbjct: 486 ALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVAVDGMVH 545
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+F A ++ H I S+L L+ +++L VP
Sbjct: 546 DFTASNKQHPRWMDICSILSFLTNEMRLEADVP 578
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 169/399 (42%), Gaps = 75/399 (18%)
Query: 114 DRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
DR + A+ ++ +VF + K + N++I Y+ G E A ++FD
Sbjct: 64 DRQTFLYLLQTTKFVAEVKQIHCHALVFGLLS-KEEYLRNSLIKRYVDNGCFECARQLFD 122
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI 233
EM R+ +S+ ++ GF K G LE F +M+ G+EPD T++ +L C +G +
Sbjct: 123 EMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKL 182
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV 293
G +H + K N+ + N L+D+Y +C ++ AR+VF ++ VSWN+II G+A
Sbjct: 183 GKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAK 242
Query: 294 NGFVGEALEYFNS-------------------------------MQKEGFKPDGVSFTGA 322
G + A + FN M E KPD V+
Sbjct: 243 VGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNL 302
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMP- 379
++A + G ++ G + K+ +IE + ++D+Y + G +E A + +P
Sbjct: 303 ISAVAEMGALDQGRWIHGLAVKML---TKIEAFSGSALIDMYCKCGSIERAFVIFNQIPE 359
Query: 380 --------------------------------MKPNEVVLGSLLAACRTKGDIILAERL- 406
KPN+V S+LAAC G + ++
Sbjct: 360 KDVTTWTTMITGFAFHGFGNKALELFSVMQAETKPNDVTFVSVLAACSHSGLVDEGLKIF 419
Query: 407 --MKYLVDLDPGVDSNYVLLANMYAAVGK-WDGAGKIRR 442
MK ++PGV+ +Y L ++ G+ D G I +
Sbjct: 420 SSMKKRYSIEPGVE-HYGCLVDLLCRSGRLLDAIGVIEK 457
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 19/247 (7%)
Query: 164 DIESAVRMFDEM-PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
++E A+ +F+ P + + ++ GF E+A +R M +G PD T + +L
Sbjct: 15 NLELAILLFNHFTPYPNLYIFNTMILGFPFSN--EKAFTIYRSMLQNGTYPDRQTFLYLL 72
Query: 223 NA---CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
A V + + + K+++ + N+LI Y GC E ARQ+F M R
Sbjct: 73 QTTKFVAEVKQIHCHALVFGLLSKEEY-----LRNSLIKRYVDNGCFECARQLFDEMSDR 127
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL--- 336
+VS+N++I+GFA G + LE F+ M+ G +PD FT L E L
Sbjct: 128 NVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPD--DFTMLGLLLLCGQLGETKLGKS 185
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+ I K I S + Y ++D+Y + L+ A V + PM+ + V +++A
Sbjct: 186 VHAQIEKSI--GSSNLILYNALLDMYVKCNELKLARKVFDG-PMEKDTVSWNTIIAGYAK 242
Query: 397 KGDIILA 403
G++ LA
Sbjct: 243 VGELELA 249
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 152/388 (39%), Positives = 244/388 (62%)
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
+ N + +A++ Y G +D A F A ++S TW AMI GYM+ G +E A R+
Sbjct: 160 AMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERL 219
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTL 231
F EM +R ++W A++ G+V+ G E+ L FR M +GV+P+ +++ SVL C+N+ L
Sbjct: 220 FQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSAL 279
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
+G +H+ V K + +L+ +YS+CG ++ A ++F ++ ++ +V WN++I G+
Sbjct: 280 QLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGY 339
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR 351
A +G +AL F+ M+KEG KPD ++F L AC+HAGL++ G++YF+ M++ + + +
Sbjct: 340 AQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETK 399
Query: 352 IEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
EHY C+VDL RAG+L +A++++++MP KP+ + G+LL ACR ++ LAE K L+
Sbjct: 400 PEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLL 459
Query: 412 DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGD 471
+LDP + + YV LAN+YAA +WD IRR+MK + K PG S IEI S +H F + D
Sbjct: 460 ELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSD 519
Query: 472 RSHIESEHIYSMLELLSFDLKLCGYVPE 499
R H E I+ L+ L +KL GYVP+
Sbjct: 520 RLHPELASIHEKLKDLEKKMKLAGYVPD 547
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 163/354 (46%), Positives = 225/354 (63%), Gaps = 3/354 (0%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPV--RDAISWTALLNGFVKRGYFEEALECFREMQ 207
F N+++ Y G ESA R+FDE+PV R+ +SW +++NGF G E L FRE
Sbjct: 156 FVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETL 215
Query: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267
+ + PD TI+SVL ACA +G L +G +H + K N V N LIDLY++CG +E
Sbjct: 216 EADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVGNSHVGNALIDLYAKCGGVE 275
Query: 268 FARQVFQRMH-KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
A +VF+ M RT+VSW S+IVG A NGF +ALE F M++E P ++ G L AC
Sbjct: 276 DAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVGVLYAC 335
Query: 327 SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVV 386
SH GL++DG RYF+ M+ Y ++P IEH GC+VDL RAGR+E+A N + MP++PN VV
Sbjct: 336 SHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYITTMPVEPNAVV 395
Query: 387 LGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKG 446
+LL AC + L E LV+LDPG +YVLL+N+YAAVG+W A +R+TM
Sbjct: 396 WRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADAHVLRKTMAT 455
Query: 447 RGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
G++K PG S +E+ + ++EF+ GDRSH ES+ IY L ++ L+ GYVP T
Sbjct: 456 HGVRKNPGHSLVELRNSVYEFVMGDRSHPESDQIYQTLAEIAERLRCQGYVPRT 509
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 86/189 (45%), Gaps = 5/189 (2%)
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD T +L AC + L G +H K V V N+L+ Y CG E A +V
Sbjct: 118 PDTHTYPPLLQACTRLLALREGESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRV 177
Query: 273 FQRMH--KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
F + +R LVSWNS++ GFA NG E L F + PDG + LTAC+ G
Sbjct: 178 FDEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIG 237
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYG-CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
+ G R K+ V H G ++DLY++ G +EDA V E M + V S
Sbjct: 238 ALTLGRRVHVFASKVGLVGN--SHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTS 295
Query: 390 LLAACRTKG 398
L+ G
Sbjct: 296 LIVGLAGNG 304
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 35/251 (13%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S ++ +GR E F P+ T +++L+ CA+ + L LG +H
Sbjct: 189 VSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGA--LTLGRRVH 246
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
K+GL N+ VG AL+D+YAK G ++ A VF+ M V
Sbjct: 247 VFASKVGLVGNS-HVGNALIDLYAKCGGVEDAWKVFEEMGV------------------- 286
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
R +SWT+L+ G G+ ++ALE F M+ + P +T++ VL AC
Sbjct: 287 -----------ARTVVSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVGVLYAC 335
Query: 226 ANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVS 283
++ G + G + + K ++ ++DL R G +E A M + V
Sbjct: 336 SHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYITTMPVEPNAVV 395
Query: 284 WNSIIVGFAVN 294
W +++ A++
Sbjct: 396 WRTLLGACAMH 406
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 152/376 (40%), Positives = 233/376 (61%), Gaps = 1/376 (0%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
+LD YAK G + A +F M ++ +W+ ++ Y ++GD+E A +FD+MP ++ ++W
Sbjct: 307 MLDGYAKAGEAEEAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTW 366
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
T +++ ++G EA F EM+ + +E D V ++S+L ACA G L +G IHR+V +
Sbjct: 367 TIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAVVSILAACAESGCLALGKRIHRHVRQ 426
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ-RMHKRTLVSWNSIIVGFAVNGFVGEALE 302
+ + VCN L+D++ +CGC+ A +F + ++ VSWN II GFA++G +AL
Sbjct: 427 RKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDSVSWNIIIGGFAMHGHGEKALN 486
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M+++GF PD V+ L+AC+H GL+E+G R+F M+ Y + P IEHYGC+VDL
Sbjct: 487 LFTQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPEIEHYGCMVDLL 546
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
R G +++A++++++MP +PNEV+ GSLL+ACR ++ AE L +L P NY
Sbjct: 547 GRGGLIKEAVDMIKSMPWEPNEVIWGSLLSACRLHKNVEYAELAANELSNLQPSNAGNYA 606
Query: 423 LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS 482
+L+N+YA GKW K R MKG G QK G S IE+ HEF GDR H ES+ I
Sbjct: 607 VLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELDEAFHEFTVGDRKHPESDQISD 666
Query: 483 MLELLSFDLKLCGYVP 498
M++ LS +K G VP
Sbjct: 667 MIDRLSSHVKCVGCVP 682
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 43/249 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT +S + G + EA FT M + + +++L+ CA+ S CL LG IH
Sbjct: 364 VTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAVVSILAACAE--SGCLALGKRIH 421
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRV-KSSFTWNAMIDGYMRRGD 164
V + L R+ +V AL+DM+ K G ++ A +FD V K S +WN +I G+ G
Sbjct: 422 RHVRQRKLGRST-LVCNALMDMFCKCGCVNRADYIFDTEIVEKDSVSWNIIIGGFAMHG- 479
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ E+AL F +M+ G PD VT+I+VL+A
Sbjct: 480 ------------------------------HGEKALNLFTQMKQQGFHPDAVTLINVLSA 509
Query: 225 CANVGTLGIGLWIHRYV--LKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KR 279
C ++G + G R+ ++ D+ K ++ ++DL R G I+ A + + M +
Sbjct: 510 CTHMGLVEEG---RRFFANMETDYGIKPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEP 566
Query: 280 TLVSWNSII 288
V W S++
Sbjct: 567 NEVIWGSLL 575
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 165/455 (36%), Positives = 266/455 (58%), Gaps = 35/455 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMT-LHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V W + I+ + R G + ++ F M + PN T + L+ C + S+ L LG
Sbjct: 171 VVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIE--SKNLKLGRA 228
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IHG + K + R V + AL+++Y K G +D
Sbjct: 229 IHGYMMKDMVLREGVKLEAALINLYVKCGYLD---------------------------- 260
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
A ++FDE+P ++ + W +L+ G+ + G E +E REM +S ++PD T+ VL+
Sbjct: 261 ---GARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLS 317
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA +G +G W+HR+ K+ D V + LID+Y++CG I AR+VF +M++R + +
Sbjct: 318 ACAQMGAFNLGNWVHRFAEKKGIWD-VFIGTALIDMYAKCGFIGAARKVFDQMNERNVAT 376
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN+I+ G+A +G A+E F+ M++ G +PD ++F L AC+H+GL+E+G +YFD+M
Sbjct: 377 WNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLML 436
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ Y++ PR+EHYGC+VDL RAG L++A +++ M ++PN VV G+LL+AC G+I +
Sbjct: 437 QYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIEIG 496
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E +++ L+ +YV+LAN+YA+ +++ +R M +GI K G S IEIG
Sbjct: 497 EWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKSHGCSMIEIGDV 556
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+HEF+ D+ H SE IYS+L+ LS LK+ GYVP
Sbjct: 557 VHEFVVADKMHPRSEEIYSVLDELSKKLKMAGYVP 591
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 127/272 (46%), Gaps = 5/272 (1%)
Query: 148 SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ 207
+ F +I+ ++ ++ A ++F++ D + A++ + A+ + +M+
Sbjct: 37 TQFIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMR 96
Query: 208 -ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
+ D T V ACA+ + G +H +++ ++ + + ++L++ Y CG I
Sbjct: 97 ACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEI 156
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTA 325
A+QVF + +V WN++I G+A G V ++ F M + + +P+ + G + A
Sbjct: 157 GNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVA 216
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
C + ++ G M K + ++ +++LY + G L+ A + + +P K N V
Sbjct: 217 CIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEK-NTV 275
Query: 386 VLGSLLAACRTKGDIILAERLMK--YLVDLDP 415
V SL+ G + L++ +L +L P
Sbjct: 276 VWNSLICGYCQIGSLNEVIELLREMHLSNLKP 307
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 261/475 (54%), Gaps = 40/475 (8%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
EA F M NP+H TF +L C+ + L +G +H + K+GLD N+ +G
Sbjct: 120 EALSIFQVMLSCAFNPDHYTFPCVLKACSGLDN--LRVGLQVHDAIVKVGLD-TNLFIGN 176
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR------------ 170
AL+ MY K G + A V D M + +WN+M+ GY + G + A+
Sbjct: 177 ALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNH 236
Query: 171 -------------------------MFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
MF+ M ++ ISW ++ +V EA+ F +
Sbjct: 237 DAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQ 296
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
M+ G++PD VTI S+L AC ++ L +G +H+Y+ K + + N+ + N L+D+Y++CGC
Sbjct: 297 MEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGC 356
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+E AR VF +M R +VSW S++ + +G +A+ F M G PD ++F L+A
Sbjct: 357 LEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSA 416
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
CSH GL++ G YF +M + Y + PRIEH+ C+VDL+ RAG +E+A + ++ MPM+PNE
Sbjct: 417 CSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNER 476
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
V G+LL+ACR + + L L P YVLL+N+YA G W +R MK
Sbjct: 477 VWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMK 536
Query: 446 GRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
GI+K PG+S++E+ +H F+AGD+ H ++++IY L++L +K GY+P+T
Sbjct: 537 KIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQT 591
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 156/338 (46%), Gaps = 21/338 (6%)
Query: 124 LLDMY---AKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDA 180
+LD Y ++ V+ + +R+ + M Y +G+ A +FD ++
Sbjct: 44 ILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLM-RAYSAQGETSVARYIFDRSLEKNV 102
Query: 181 ISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
+ + ++ +V + EAL F+ M PD+ T VL AC+ + L +GL +H
Sbjct: 103 VFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDA 162
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
++K N+ + N L+ +Y +CGC+ AR+V +M R +VSWNS++ G+A +G +A
Sbjct: 163 IVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDA 222
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY----FDIMKKIYRVSPRIEHYG 356
LE M D + + L + ++Y F+ M K +S +
Sbjct: 223 LEICKEMDSLNLNHDAGTMASLSPVVCYTSL--ENVQYIHNMFERMTKKNLIS-----WN 275
Query: 357 CIVDLYSRAGRLEDALNV---VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV-- 411
++ +Y +A+++ +E MKP+ V + SLL AC + L RL KY+
Sbjct: 276 VMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKG 335
Query: 412 DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+L P + LL +MYA G + A + M+ R +
Sbjct: 336 NLRPNLLLENALL-DMYAKCGCLEEARDVFDKMRLRDV 372
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 34/152 (22%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K + V WTS +S + RSG+ +A F +M G NP+ I F+++LS C+
Sbjct: 366 KMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSH------ 419
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
T LLD + RM T + + F M+D
Sbjct: 420 -----------------------TGLLDQGRHYFRM--MTEQYGIVPRIEHFA--CMVDL 452
Query: 159 YMRRGDIESAVRMFDEMPVR-DAISWTALLNG 189
+ R G++E A +MP+ + W ALL+
Sbjct: 453 FGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484
>gi|242037745|ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
gi|241920121|gb|EER93265.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
Length = 537
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 169/456 (37%), Positives = 262/456 (57%), Gaps = 15/456 (3%)
Query: 43 NPTVQWTSSISR-HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC---ADFPSQCL 98
+P + ++++R H SG+ A+A F M G P+++ L+ C FP+
Sbjct: 75 DPGLVTRTAMARAHAASGQTAQALAVFGDMLADGVLPDNVALAVALAACHGTGSFPAALG 134
Query: 99 FL-----GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWN 153
G M+H L+ G+ +V V T L+ +Y ++G + ++ +FDAM VKS+ +WN
Sbjct: 135 MAAARRPGKMVHALIVTSGI-VPDVFVSTELIRLYGEYGELLVSRRLFDAMPVKSTVSWN 193
Query: 154 AMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG--- 210
AM+ Y+R ++ A +F MP RD +SW ++ G+ G F EALE FR+M
Sbjct: 194 AMVHQYIRHSNVGDAYELFLAMPKRDVVSWNTIIAGYCLIGRFMEALELFRQMMSPSSCP 253
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
V P+ TI +VL ACA G L G+W+H Y+ + D+ + +LID+Y++CG IE A
Sbjct: 254 VHPNGPTISTVLAACAGAGCLETGIWVHAYIDRNRMNDDGSLDRSLIDMYAKCGSIEKAL 313
Query: 271 QVFQRMH-KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
QVF++ KR L SW ++I G A++G +AL F MQ G +PD V+ G L AC+H
Sbjct: 314 QVFEKAPGKRDLYSWTTVICGLAMHGKAADALRMFGMMQDNGIRPDDVTLVGVLNACAHG 373
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
GL+++GL +F ++K Y ++P+IEHYGC++DL R GRL++A +++ M MKPN V+ G+
Sbjct: 374 GLVDEGLHHFYSLEK-YAITPKIEHYGCVIDLLGRVGRLQEAYSIIRTMRMKPNAVIWGA 432
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
L AC+ ++ L E L LDP V+L+++YA W + RR M +
Sbjct: 433 FLNACKVHSNVELGEIAAAELTRLDPDDPWAKVMLSSLYAKAQDWSSLARERREMNSLQM 492
Query: 450 QKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
+K PG SSIE+ +HEF+AG H + I ++LE
Sbjct: 493 KKTPGCSSIELDGEVHEFVAGSFQHPQHGEICTVLE 528
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 127/325 (39%), Gaps = 76/325 (23%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
A IHGL+ K GL + TALL YA GR
Sbjct: 30 AAAIHGLLFKEGLLHAGSHLPTALLSAYAALGR--------------------------- 62
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
A +FDEMP ++ TA+ G +AL F +M GV PD V +
Sbjct: 63 ----PRHARDLFDEMPDPGLVTRTAMARAHAASGQTAQALAVFGDMLADGVLPDNVALAV 118
Query: 221 VLNACANVGT----LGI------GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
L AC G+ LG+ G +H ++ +V V LI LY G + +R
Sbjct: 119 ALAACHGTGSFPAALGMAAARRPGKMVHALIVTSGIVPDVFVSTELIRLYGEYGELLVSR 178
Query: 271 QVFQ-------------------------------RMHKRTLVSWNSIIVGFAVNGFVGE 299
++F M KR +VSWN+II G+ + G E
Sbjct: 179 RLFDAMPVKSTVSWNAMVHQYIRHSNVGDAYELFLAMPKRDVVSWNTIIAGYCLIGRFME 238
Query: 300 ALEYFNSMQKEG---FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG 356
ALE F M P+G + + L AC+ AG +E G+ + + R++
Sbjct: 239 ALELFRQMMSPSSCPVHPNGPTISTVLAACAGAGCLETGIWVHAYIDR-NRMNDDGSLDR 297
Query: 357 CIVDLYSRAGRLEDALNVVENMPMK 381
++D+Y++ G +E AL V E P K
Sbjct: 298 SLIDMYAKCGSIEKALQVFEKAPGK 322
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 163/445 (36%), Positives = 257/445 (57%), Gaps = 4/445 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + + H + G EA ++ G N +F +L+ C + L +
Sbjct: 157 VVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKE--VGLTRQV 214
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + G +NV++ +++LD Y K G M A +FD M + W M+ GY + GD
Sbjct: 215 HGQILVAGF-LSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGD 273
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++SA +F EMP ++ +SWTAL++G+ + G +ALE F +M + V PD T S L A
Sbjct: 274 MKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCA 333
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVS 283
CA++ +L G IH Y+L+ +F+ N V + LID+YS+CG + R+VF M +K +V
Sbjct: 334 CASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVL 393
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN+II A +G EA++ + M + G KPD ++F L ACSH+GL++ GL +F+ M
Sbjct: 394 WNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMS 453
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
Y + P EHY C++DL RAG E+ ++ +E MP KP++ V +LL CR G I L
Sbjct: 454 CDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELG 513
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
+ + L++L+P + YVLL+++YA +G+W+ K+R+ M R ++K+ +S +EI +
Sbjct: 514 RKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENK 573
Query: 464 IHEFMAGDRSHIESEHIYSMLELLS 488
+H F D SH E IYS+LE L+
Sbjct: 574 VHSFSVSDSSHPLKEQIYSVLEQLA 598
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 192/415 (46%), Gaps = 41/415 (9%)
Query: 15 LPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLH 74
+P +PN N + +TN K P + +I + C+ ++ EA +
Sbjct: 1 MPSLSSPNLNFSP-----FRTNPRKPRRRPCL--VEAIVKLCKKNKLNEAVSSLENLARR 53
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
G + T +LL CAD S+ L G +H + GL R + L++MYAK G+
Sbjct: 54 GLRLDSRTLASLLQHCAD--SRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKE 111
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
A VFD M ++ ++WN M+ GY + G I+ A ++FD+MP +D +SW ++ + G
Sbjct: 112 VEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCG 171
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
Y++EAL + E + G++ + + VL C + +G+ +H +L F NV + +
Sbjct: 172 YWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSS 231
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTL-------------------------------VS 283
+++D Y +CG + AR++F M R + VS
Sbjct: 232 SVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVS 291
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W ++I G+A NG +ALE F M +PD +F+ L AC+ ++ G + +
Sbjct: 292 WTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLL 351
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
+I P ++D+YS+ G L V + M K + V+ ++++A G
Sbjct: 352 RI-NFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHG 405
>gi|297824523|ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325983|gb|EFH56403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 155/377 (41%), Positives = 244/377 (64%), Gaps = 3/377 (0%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
+V++ A++D + K G M A +FD M K+ TW MI GY DI+SA ++FD MP
Sbjct: 175 DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDAMP 234
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTIISVLNACANVGTLGIGL 235
R+ +SW ++ G+ + +EA+ F+EMQ + ++PD VTI+SVL A ++ G L +G
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEAIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
W H +V +++ VKVC ++D+YS+CG IE A+++F M ++ + SWN++I G+A+NG
Sbjct: 295 WCHCFVQRKNLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNG 354
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
AL+ F +M KE KPD ++ ++AC+H GL+E+G ++F +M+K + ++ +IEHY
Sbjct: 355 NAHAALDLFLTMAKEE-KPDEITMLAVISACNHGGLVEEGRKWFQMMRK-FGLNAKIEHY 412
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
GC+VDL RAG L+ A +++ NMP KPN ++L S L+AC DI AER++K V+L+P
Sbjct: 413 GCMVDLLGRAGNLKQAEHLITNMPFKPNGIILSSFLSACGQYKDIERAERILKKAVELEP 472
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
D NYVLL N+YAA +WD G ++ M+ +K+ G S IEI + EF++GD +H
Sbjct: 473 QNDGNYVLLRNLYAADKRWDDFGMVKNMMRKNEAKKEVGCSLIEINYIVSEFISGDTTHP 532
Query: 476 ESEHIYSMLELLSFDLK 492
+ I+ +LE L +K
Sbjct: 533 HRQSIHLVLEKLLVHMK 549
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 148/306 (48%), Gaps = 45/306 (14%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P++ TF T+ C S C++ G +H + + G ++ V T ++DMYAKFG+M A
Sbjct: 76 PDNFTFTTMTKSCT--LSMCVYQGLQLHSQIWRSGF-CADMYVSTGVVDMYAKFGKMGCA 132
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP-VRDAISWTALLNGFVKRGYF 196
VFD M +S +W A+I GY+R G+++ A ++FD+MP V+D + + A+++GFVK G
Sbjct: 133 RNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQVKDVVIYNAMMDGFVKSGDM 192
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
A F EM + T+I+ W T+
Sbjct: 193 TSARRLFDEMT-------HKTVIT---------------W-----------------TTM 213
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ-KEGFKPD 315
I Y I+ AR++F M +R LVSWN++I G+ N EA+ F MQ PD
Sbjct: 214 IHGYCNSNDIDSARKLFDAMPERNLVSWNTMIGGYCQNKQPQEAIRLFQEMQATTSLDPD 273
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V+ L A S G + G + + + +++ I+D+YS+ G +E A +
Sbjct: 274 DVTILSVLPAISDTGALSLG-EWCHCFVQRKNLDKKVKVCTAILDMYSKCGEIEKAKRIF 332
Query: 376 ENMPMK 381
+ MP K
Sbjct: 333 DEMPEK 338
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 148/377 (39%), Gaps = 107/377 (28%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRM---------TLHG---------------- 75
T + WT+ I +C S I A F M T+ G
Sbjct: 203 THKTVITWTTMIHGYCNSNDIDSARKLFDAMPERNLVSWNTMIGGYCQNKQPQEAIRLFQ 262
Query: 76 -------TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMY 128
+P+ +T +++L +D + L LG H V + LD+ V V TA+LDMY
Sbjct: 263 EMQATTSLDPDDVTILSVLPAISD--TGALSLGEWCHCFVQRKNLDK-KVKVCTAILDMY 319
Query: 129 AKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLN 188
+K G ++ A +FD M K +WNAMI GY G+ +A+ +F M +
Sbjct: 320 SKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAHAALDLFLTMAKEE--------- 370
Query: 189 GFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD 248
+PD +T+++V++AC + G + G + + K
Sbjct: 371 -----------------------KPDEITMLAVISACNHGGLVEEGRKWFQMMRKFGLNA 407
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
++ ++DL R G ++ A + M
Sbjct: 408 KIEHYGCMVDLLGRAGNLKQAEHLITNM-------------------------------- 435
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE-HYGCIVDLYSRAGR 367
FKP+G+ + L+AC IE R I+KK + P+ + +Y + +LY+ R
Sbjct: 436 --PFKPNGIILSSFLSACGQYKDIERAER---ILKKAVELEPQNDGNYVLLRNLYAADKR 490
Query: 368 LEDALNVVENMPMKPNE 384
+D +V+NM M+ NE
Sbjct: 491 WDD-FGMVKNM-MRKNE 505
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/486 (34%), Positives = 258/486 (53%), Gaps = 40/486 (8%)
Query: 52 ISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKL 111
I + +G E F M P+H TF +L C+ S + +G IHG K+
Sbjct: 112 IRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACS--CSGTIVIGRKIHGSATKV 169
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR- 170
GL + + VG L+ MY K G + A +V D M + +WN+++ GY + + A+
Sbjct: 170 GLS-STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Query: 171 ------------------------------------MFDEMPVRDAISWTALLNGFVKRG 194
MF +M + +SW ++ ++K
Sbjct: 229 CREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNA 288
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
EA+E + M+ G EPD V+I SVL AC + L +G IH Y+ ++ N+ + N
Sbjct: 289 MPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN 348
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
LID+Y++CGC+E AR VF+ M R +VSW ++I + +G +A+ F+ +Q G P
Sbjct: 349 ALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVP 408
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
D ++F L ACSHAGL+E+G F +M Y+++PR+EH C+VDL RAG++++A
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRF 468
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
+++M M+PNE V G+LL ACR D + L L P YVLL+N+YA G+W
Sbjct: 469 IQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRW 528
Query: 435 DGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC 494
+ IR MK +G++K PG S++E+ IH F+ GDRSH +S+ IY L++L +K
Sbjct: 529 EEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKEL 588
Query: 495 GYVPET 500
GYVP++
Sbjct: 589 GYVPDS 594
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 169/368 (45%), Gaps = 16/368 (4%)
Query: 93 FPSQCLFLGAMIHGLVCKLGLDRNN----VMVGTALLDMYAKFG--RMDLATVVFDAMRV 146
FP F + + KL LD+ + V + +LD Y R + ++ + +R
Sbjct: 13 FPKFRKFQSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRC 72
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
SS M Y D+ SA ++FDE+P R+ I ++ +V G++ E ++ F M
Sbjct: 73 NSSLGVKLM-RAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM 131
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
V PD+ T VL AC+ GT+ IG IH K + V N L+ +Y +CG +
Sbjct: 132 CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFL 191
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
AR V M +R +VSWNS++VG+A N +ALE M+ D + L A
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV 251
Query: 327 SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPN 383
S+ E+ + D+ K+ + S + + ++ +Y + +A+ + M +P+
Sbjct: 252 SNT-TTENVMYVKDMFFKMGKKS--LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPD 308
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYL--VDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
V + S+L AC + L +++ Y+ L P + L+ +MYA G + A +
Sbjct: 309 AVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI-DMYAKCGCLEKARDVF 367
Query: 442 RTMKGRGI 449
MK R +
Sbjct: 368 ENMKSRDV 375
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 137/339 (40%), Gaps = 75/339 (22%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W I + ++ EA ++RM G P+ ++ ++L C D + L LG IH
Sbjct: 275 VSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD--TSALSLGKKIH 332
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G + + L N+++ AL+DMYAK G ++ A VF+ M+ + +W AMI Y
Sbjct: 333 GYIERKKL-IPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAY------ 385
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
GF RG +A+ F ++Q SG+ PD + ++ L AC
Sbjct: 386 -----------------------GFSGRGC--DAVALFSKLQDSGLVPDSIAFVTTLAAC 420
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM--HKRTLVS 283
++ G L E R F+ M H +
Sbjct: 421 SHAGLL-----------------------------------EEGRSCFKLMTDHYKITPR 445
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
+ + G G+ E + +Q +P+ + L AC + GL D
Sbjct: 446 LEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAAD--- 502
Query: 344 KIYRVSPRIE-HYGCIVDLYSRAGRLEDALNVVENMPMK 381
K+++++P +Y + ++Y++AGR E+ N+ M K
Sbjct: 503 KLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSK 541
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 18/179 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ IS + SGR +A F+++ G P+ I F+T L+ C+ G +
Sbjct: 376 VSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACS-------HAGLLEE 428
Query: 106 GLVC-KLGLDRNNVMVG----TALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDGY 159
G C KL D + ++D+ + G++ A M ++ + W A++
Sbjct: 429 GRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGAC 488
Query: 160 MRRGDIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
D + +A ++F P + + L N + K G +EE M+ G++ +
Sbjct: 489 RVHSDTDIGLLAADKLFQLAPEQSGY-YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKN 546
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 261/475 (54%), Gaps = 40/475 (8%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
EA F M NP+H TF +L C+ + L +G +H + K+GLD N+ +G
Sbjct: 120 EALSIFQVMLSCAFNPDHYTFPCVLKACSGLDN--LRVGLQVHDAIVKVGLD-TNLFIGN 176
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR------------ 170
AL+ MY K G + A V D M + +WN+M+ GY + G + A+
Sbjct: 177 ALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNH 236
Query: 171 -------------------------MFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
MF+ M ++ ISW ++ +V EA+ F +
Sbjct: 237 DAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQ 296
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
M+ G++PD VTI S+L AC ++ L +G +H+Y+ K + + N+ + N L+D+Y++CGC
Sbjct: 297 MEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGC 356
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+E AR VF +M R +VSW S++ + +G +A+ F M G PD ++F L+A
Sbjct: 357 LEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSA 416
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
CSH GL++ G YF +M + Y + PRIEH+ C+VDL+ RAG +E+A + ++ MPM+PNE
Sbjct: 417 CSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNER 476
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
V G+LL+ACR + + L L P YVLL+N+YA G W +R MK
Sbjct: 477 VWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMK 536
Query: 446 GRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
GI+K PG+S++E+ +H F+AGD+ H ++++IY L++L +K GY+P+T
Sbjct: 537 KIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQT 591
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 156/338 (46%), Gaps = 21/338 (6%)
Query: 124 LLDMY---AKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDA 180
+LD Y ++ V+ + +R+ + M Y +G+ A +FD ++
Sbjct: 44 ILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLM-RAYSAQGETSVARYIFDRSLEKNV 102
Query: 181 ISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
+ + ++ +V + EAL F+ M PD+ T VL AC+ + L +GL +H
Sbjct: 103 VFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDA 162
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
++K N+ + N L+ +Y +CGC+ AR+V +M R +VSWNS++ G+A +G +A
Sbjct: 163 IVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDA 222
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY----FDIMKKIYRVSPRIEHYG 356
LE M D + + L + ++Y F+ M K +S +
Sbjct: 223 LEICKEMDSLNLNHDAGTMASLSPVVCYTSL--ENVQYIHNMFERMTKKNLIS-----WN 275
Query: 357 CIVDLYSRAGRLEDALNV---VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV-- 411
++ +Y +A+++ +E MKP+ V + SLL AC + L RL KY+
Sbjct: 276 VMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKG 335
Query: 412 DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+L P + LL +MYA G + A + M+ R +
Sbjct: 336 NLQPNLLLENALL-DMYAKCGCLEEARDVFDKMRLRDV 372
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 34/152 (22%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K + V WTS +S + RSG+ +A F +M G NP+ I F+++LS C+
Sbjct: 366 KMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSH------ 419
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
T LLD + RM T + + F M+D
Sbjct: 420 -----------------------TGLLDQGRHYFRM--MTEQYGIVPRIEHFA--CMVDL 452
Query: 159 YMRRGDIESAVRMFDEMPVR-DAISWTALLNG 189
+ R G++E A +MP+ + W ALL+
Sbjct: 453 FGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/461 (37%), Positives = 263/461 (57%), Gaps = 9/461 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S S + G + F M L+G P+ +T +++L C+D Q L G +I
Sbjct: 409 VVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDL--QDLKSGKVI 466
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + G+ +V V ALL +YAK + A VVFD + + +WN ++ Y +
Sbjct: 467 HGFAVRHGM-VEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKE 525
Query: 165 IESAVRMFDEM---PVR-DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
E + MF +M V+ D I+W+ ++ G VK EEA+E FR+MQ G +PD TI S
Sbjct: 526 YEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYS 585
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKD-NVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+L AC+ L +G IH YV + +KD ++ N L+D+Y++CG + +R VF M +
Sbjct: 586 ILRACSLSECLRMGKEIHCYVFRH-WKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIK 644
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+ SWN++I ++G EAL F M KPD +FT L+ACSH+ L+E+G++ F
Sbjct: 645 DVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIF 704
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
+ M + + V P EHY C+VD+YSRAG LE+A ++ MPM+P + + LA CR +
Sbjct: 705 NSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKN 764
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ LA+ K L ++DP +NYV L N+ W A KIR+ MK RGI K PG S
Sbjct: 765 VELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFH 824
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+G+ +H F+AGD+S++ES+ IY+ L+ L +K GY P+T
Sbjct: 825 VGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDT 865
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 168/352 (47%), Gaps = 41/352 (11%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S + + G + F +M L+ N +T ++L GC+D Q L G I
Sbjct: 106 VVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDL--QDLKSGKEI 163
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG V + G+ +V V +A ++ YAK + V+ + T
Sbjct: 164 HGFVVRHGM-VEDVFVSSAFVNFYAK------------CLCVREAQT------------- 197
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+FD MP RD ++W +L + +V G+ ++ L FREM + GV+PD VT+ +L+A
Sbjct: 198 ------VFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSA 251
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+++ L G IH + LK +NV V N L++LY C C+ A+ VF M R +++W
Sbjct: 252 CSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITW 311
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
NS+ + GF + L F M G KPD ++ + L ACS ++ G K
Sbjct: 312 NSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVK 371
Query: 345 IYRVSPRIEHYGC--IVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
V + + C +V+LY+ + +A V + MP + VV + L++C
Sbjct: 372 HGMVE---DVFVCTALVNLYANCLCVREAQTVFDLMPHR--NVVTWNSLSSC 418
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 169/372 (45%), Gaps = 70/372 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W S S + G + F M L+G P+ + ++L C+ L G I
Sbjct: 308 VITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKD--LKSGKTI 365
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG K G+ +V V TAL+++YA N +
Sbjct: 366 HGFAVKHGM-VEDVFVCTALVNLYA-----------------------NCLC-------- 393
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A +FD MP R+ ++W +L + +V G+ ++ L FREM ++GV+PD VT++S+L+A
Sbjct: 394 VREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHA 453
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+++ L G IH + ++ ++V VCN L+ LY++C C+ A+ VF + R + SW
Sbjct: 454 CSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASW 513
Query: 285 N----------------------------------SIIVGFAV-NGFVGEALEYFNSMQK 309
N S+++G V N + EA+E F MQ
Sbjct: 514 NGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQT 573
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
GFKPD + L ACS + + G + + ++ + +VD+Y++ G L
Sbjct: 574 MGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWK-DWDLARTNALVDMYAKCGGLS 632
Query: 370 DALNVVENMPMK 381
+ NV + MP+K
Sbjct: 633 LSRNVFDMMPIK 644
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 136/291 (46%), Gaps = 34/291 (11%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S S + G + F M L G P+ +T +LS C+D Q L G I
Sbjct: 207 VVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDL--QDLKSGKAI 264
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG K G+ V++ F NA+++ Y
Sbjct: 265 HGFALKHGM--------------------------------VENVFVSNALVNLYESCLC 292
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A +FD MP R+ I+W +L + +V G+ ++ L FREM ++GV+PD + + S+L A
Sbjct: 293 VREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPA 352
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+ + L G IH + +K ++V VC L++LY+ C C+ A+ VF M R +V+W
Sbjct: 353 CSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTW 412
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
NS+ + GF + L F M G KPD V+ L ACS ++ G
Sbjct: 413 NSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSG 463
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 158/348 (45%), Gaps = 38/348 (10%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
NA I Y + +E A R+FD++ RD ++W +L +V G+ ++ L FR+M ++ V+
Sbjct: 79 NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
+ +T+ S+L C+++ L G IH +V++ ++V V + ++ Y++C C+ A+ V
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTV 198
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS----- 327
F M R +V+WNS+ + GF + L F M +G KPD V+ + L+ACS
Sbjct: 199 FDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDL 258
Query: 328 -----------HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL--------------- 361
G++E+ + + + +Y + + DL
Sbjct: 259 KSGKAIHGFALKHGMVEN-VFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASC 317
Query: 362 YSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD 418
Y G + LNV M + KP+ + + S+L AC D+ + + + V V+
Sbjct: 318 YVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVK-HGMVE 376
Query: 419 SNYVL--LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+V L N+YA A + M R + LSS + G
Sbjct: 377 DVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGF 424
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 119/310 (38%), Gaps = 38/310 (12%)
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
+ G EA++ + + G++PD ++V ACA H + +V
Sbjct: 16 IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
+ N I Y +C C+E AR+VF + R +V+WNS+ + GF + L F M
Sbjct: 76 SIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLN 135
Query: 311 GFKPDGVSFTGALTACS----------------HAGLIEDGL---RYFDIMKK------- 344
K + ++ + L CS G++ED + + K
Sbjct: 136 KVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREA 195
Query: 345 --IYRVSPR--IEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTK 397
++ + P + + + Y G + LNV M + KP+ V + +L+AC
Sbjct: 196 QTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDL 255
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGIQKKPG 454
D+ + + + L G+ N + L N+Y + A + M R +
Sbjct: 256 QDLKSGKAIHGFA--LKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNS 313
Query: 455 LSSIEIGSGI 464
L+S + G
Sbjct: 314 LASCYVNCGF 323
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/448 (37%), Positives = 263/448 (58%), Gaps = 4/448 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ I+R+C+SG E+ F RM G PN F ++LS A + L G IH
Sbjct: 282 VSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASV--EALQAGMNIH 339
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V K+G +++ V V ++L+DMY K G +FD + K+ +WNAM+ GY G +
Sbjct: 340 GHVTKIGFEKD-VFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHM 398
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A +F+ MPVR+ +SW+A++ G + F+E E F EM + G P+ T S+L AC
Sbjct: 399 EEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCAC 458
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A+ +L G +H ++K + + V L D+Y++ G IE +++VF RM K+ VSW
Sbjct: 459 ASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWT 518
Query: 286 SIIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G A +G E+L F M+K P+ V F L ACSH+GL++ GL YF+ M+
Sbjct: 519 AMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEA 578
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y + P+ H+ C+VD+ SRAGRL +A + +MP +P +LL+ C+T + LAE
Sbjct: 579 VYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAE 638
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
R+ L ++ + YVLL+N+YA+ G+W K+R+ MK +G++K G S +EI +
Sbjct: 639 RVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSGGCSWVEIRDRV 698
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLK 492
H F + D +H +S IY +LELL +++K
Sbjct: 699 HSFYSEDGAHSQSAEIYEILELLGYEMK 726
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 205/402 (50%), Gaps = 43/402 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT++IS + ++G EA F ++ PN +TF +++ CA+ LG +
Sbjct: 150 VSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGD--FGLGMSVL 207
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
GL+ K G + +++ V +L+ + + G + LA VFD M K +W A++D Y+ ++
Sbjct: 208 GLIVKTGYE-HDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDEL 266
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A R+FDEMP R+ +SW+A++ + + GY EE+L F M G +P+ S+L+A
Sbjct: 267 GEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSAL 326
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A+V L G+ IH +V K F+ +V V ++LID+Y +CG + R +F + ++ +VSWN
Sbjct: 327 ASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWN 386
Query: 286 SIIVGFAVNGFVGEA-------------------------------LEYFNSMQKEGFKP 314
+++ G+++NG + EA E FN M G P
Sbjct: 387 AMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIP 446
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDAL 372
+ +F+ L AC+ ++ G ++ KI ++ + + Y + D+Y+++G +E +
Sbjct: 447 NKSTFSSLLCACASTASLDKGK---NLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSK 503
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
V MP K NEV +++ G LAE + +++
Sbjct: 504 KVFNRMP-KKNEVSWTAMIQGLAESG---LAEESLTLFEEME 541
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 166/334 (49%), Gaps = 37/334 (11%)
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
D +++V ++ + G +D A +FD M + +W A+I G+M+ G + ++ F
Sbjct: 82 FDGFDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYF 141
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
+ P ++ +SWTA ++G+V+ G+ EA++ F ++ S V+P+ VT SV+ ACAN+G G
Sbjct: 142 ERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFG 201
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI----- 287
+G+ + ++K ++ ++ V N+LI L R G I AR+VF RM ++ +VSW +I
Sbjct: 202 LGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYV 261
Query: 288 --------------------------IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
I + +G+ E+L F M +EGFKP+ F+
Sbjct: 262 EMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSS 321
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+A + ++ G+ + KI + ++D+Y + G +D + + + ++
Sbjct: 322 ILSALASVEALQAGMNIHGHVTKI-GFEKDVFVSSSLIDMYCKCGETKDGRFLFDTI-LE 379
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
N V +++ G + A KYL ++ P
Sbjct: 380 KNMVSWNAMVGGYSLNGHMEEA----KYLFNIMP 409
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 142/342 (41%), Gaps = 72/342 (21%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W++ I+ H + E F M L G PN TF +LL CA S L G
Sbjct: 410 VRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTAS--LDKG 467
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+HG + KLG+ + + VGTAL DMYAK G ++ + VF+ M K+ +W AMI G
Sbjct: 468 KNLHGKIVKLGI-QCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAE 526
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G E ++ +F+EM + S + P+ V ++V
Sbjct: 527 SGLAEESLTLFEEME------------------------------KTSSIAPNEVMFLAV 556
Query: 222 LNACANVGTLGIGLW-IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
L AC++ G + GLW + K + ++D+ SR G ++F
Sbjct: 557 LFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAG------RLF------- 603
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
EA E+ SM F+P+ ++ L+ C E R
Sbjct: 604 ------------------EAEEFIYSMP---FQPETNAWAALLSGCKTYKNEELAER--- 639
Query: 341 IMKKIYRVSPR-IEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ K++ ++ + Y + ++Y+ AGR D L V + M K
Sbjct: 640 VAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAK 681
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/467 (36%), Positives = 271/467 (58%), Gaps = 5/467 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V WT I + G +E+ F +M + TL+SGC + CL G+ +
Sbjct: 357 SVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICL--GSQL 414
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H L K G R V+V +L+ MYAK G + A ++F+ M + +W MI Y + G+
Sbjct: 415 HSLCLKSGHTRA-VVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGN 473
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLN 223
I A FD+M R+ I+W A+L +++ G E+ L+ + +M V PD+VT +++
Sbjct: 474 IAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFR 533
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
CA++G +G I + +K + V N +I +YS+CG I AR+ F + ++ LVS
Sbjct: 534 GCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVS 593
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN++I G++ +G +A+E F+ + +G KPD +S+ L+ CSH+GL+E+G YFD+MK
Sbjct: 594 WNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMK 653
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ + +SP +EH+ C+VDL RAG L +A N+++ MPMKP V G+LL+AC+T G+ LA
Sbjct: 654 RDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLA 713
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E K+L DLD Y+LLA MYA GK D + ++R+ M+ +GI+K PG S +E+ +
Sbjct: 714 ELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNR 773
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV-PETVAGELYEND 509
+H F A D SH + I L+ L + GYV E+ E++ ++
Sbjct: 774 VHVFKAEDVSHPQVIAIREKLDELMEKIAHLGYVRTESPRSEIHHSE 820
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 159/325 (48%), Gaps = 5/325 (1%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPSQCLFLGAMIHG 106
W + +S + +SG+ A F M G + PN TF ++ C + L + G
Sbjct: 126 WNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLL--G 183
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
L+ K +++ V TAL+DM + G MD A+ F ++ + N+M+ GY + ++
Sbjct: 184 LLSKFD-SQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVD 242
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A+ +F MP RD +SW +++ K G EAL+ +M GV PD T S L ACA
Sbjct: 243 HALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACA 302
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ +L G +H V++ + V + +++LY++CGC + A++VF + R VSW
Sbjct: 303 RLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTV 362
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I GF G E++E FN M+ E D + ++ C + I G + + K
Sbjct: 363 LIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSG 422
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDA 371
+ ++ +Y++ G L++A
Sbjct: 423 HTRAVVVS-NSLISMYAKCGNLQNA 446
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 182/424 (42%), Gaps = 78/424 (18%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRM-DLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H + +GL + V + LL Y G + D ++ D + + T N M++GY +
Sbjct: 47 LHSRLINVGL-ASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMMNGYAKL 105
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE-PDYVTIISV 221
G + AV +F MP RD SW +++G+ + G F AL+ F M+ +G P+ T V
Sbjct: 106 GSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCV 165
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR----------- 270
+ +C +G + L + + K D +D+ V L+D+ RCG ++FA
Sbjct: 166 MKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTI 225
Query: 271 --------------------QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
++F+ M +R +VSWN +I + +G V EAL+ M +
Sbjct: 226 ICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGK 285
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRL 368
G +PD ++T +LTAC+ +E G + + ++ R P I+ Y +V+LY++ G
Sbjct: 286 GVRPDSTTYTSSLTACARLSSLEWGKQ---LHVQVIRNLPHIDPYVASAMVELYAKCGCF 342
Query: 369 EDALNVVENMP----------------------------------MKPNEVVLGSLLAAC 394
++A V ++ M ++ L +L++ C
Sbjct: 343 KEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGC 402
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGIQK 451
DI L +L + + L G V+ L +MYA G A I M R I
Sbjct: 403 CNTMDICLGSQL--HSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVS 460
Query: 452 KPGL 455
G+
Sbjct: 461 WTGM 464
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 38/305 (12%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W IS +SGR+ EA M G P+ T+ + L+ CA S L G +H
Sbjct: 257 VSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSS--LEWGKQLH 314
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + L + V +A++++YAK G
Sbjct: 315 VQVIR-NLPHIDPYVASAMVELYAKCGC-------------------------------F 342
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A R+F + R+++SWT L+ GF++ G F E++E F +M+ + D + ++++ C
Sbjct: 343 KEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGC 402
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
N + +G +H LK V V N+LI +Y++CG ++ A +F M +R +VSW
Sbjct: 403 CNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWT 462
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+I ++ G + +A E+F+ M +++ L A G EDGL+ + M
Sbjct: 463 GMITAYSQVGNIAKAREFFDDMSTRNV----ITWNAMLGAYIQHGAEEDGLKMYSDMLTE 518
Query: 346 YRVSP 350
V P
Sbjct: 519 KDVIP 523
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 120/310 (38%), Gaps = 51/310 (16%)
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR----------- 270
L +C L +H ++ V + NTL+ Y CG + AR
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91
Query: 271 ---------------------QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
++F RM R + SWN+I+ G+ +G AL+ F SM++
Sbjct: 92 VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQ 151
Query: 310 EGFK-PDGVSFTGALTACSHAGLIEDGLRYFDIMKKI-YRVSPRIEHYGCIVDLYSRAGR 367
G P+ +F + +C G E L+ ++ K + P ++ +VD+ R G
Sbjct: 152 TGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQ--TALVDMLVRCGA 209
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
++ A + P + S+L + A + K + + D V N V+ A
Sbjct: 210 MDFASKQFSRIK-NPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDV-VSWNMVISA-- 265
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPG-----------LSSIEIGSGIHEFMAGDRSHIE 476
+ G+ A + M G+G++ LSS+E G +H + + HI+
Sbjct: 266 LSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHID 325
Query: 477 SEHIYSMLEL 486
+M+EL
Sbjct: 326 PYVASAMVEL 335
>gi|15229345|ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/443 (38%), Positives = 266/443 (60%), Gaps = 7/443 (1%)
Query: 55 HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLG-L 113
+ + G EA + +M G P+ T ++LL C + LG +HG + + G +
Sbjct: 207 YAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSD--IRLGKGVHGWIERRGPV 264
Query: 114 DRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
+N+++ ALLDMY K LA FDAM+ K +WN M+ G++R GD+E+A +FD
Sbjct: 265 YSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFD 324
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEAL-ECFREMQI-SGVEPDYVTIISVLNACANVGTL 231
+MP RD +SW +LL G+ K+G + + E F EM I V+PD VT++S+++ AN G L
Sbjct: 325 QMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGEL 384
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
G W+H V++ K + + + LID+Y +CG IE A VF+ ++ + W S+I G
Sbjct: 385 SHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGL 444
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR 351
A +G +AL+ F MQ+EG P+ V+ LTACSH+GL+E+GL F+ MK + P
Sbjct: 445 AFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPE 504
Query: 352 IEHYGCIVDLYSRAGRLEDALNVVE-NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
EHYG +VDL RAGR+E+A ++V+ MPM+P++ + GS+L+ACR DI AE + L
Sbjct: 505 TEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTEL 564
Query: 411 VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAG 470
+ L+P + YVLL+N+YA VG+W + K R M+ RG++K G SS+ G+H F+A
Sbjct: 565 LKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAA 624
Query: 471 DR-SHIESEHIYSMLELLSFDLK 492
++ +H I +L+ L ++K
Sbjct: 625 EKQNHPRWTEIKRILQHLYNEMK 647
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 138/278 (49%), Gaps = 12/278 (4%)
Query: 77 NPNHITFITLLSGCADFPSQCLFL-GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMD 135
NPN + T++S + ++C L +MI V DR + ++ ++
Sbjct: 97 NPNVFVYNTMISAVSSSKNECFGLYSSMIRHRVSP---DRQTFLYLMKASSFLSEVKQIH 153
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
+V + + ++ WN+++ YM G+ A ++F MP D S+ ++ G+ K+G+
Sbjct: 154 CHIIVSGCLSL-GNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGF 212
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD--FKDNVKVC 253
EAL+ + +M G+EPD T++S+L C ++ + +G +H ++ ++ + N+ +
Sbjct: 213 SLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILS 272
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
N L+D+Y +C A++ F M K+ + SWN+++VGF G + A F+ M K
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR--- 329
Query: 314 PDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSP 350
D VS+ L S G + +R F M + +V P
Sbjct: 330 -DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKP 366
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 40 STVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
+T WTS I+ G +A F RM G PN++T + +L+ C+
Sbjct: 429 ATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEG 488
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLAT-VVFDAMRVKSSFT-WNAMID 157
L H + K G D G+ L+D+ + GR++ A +V M ++ S + W +++
Sbjct: 489 LHVFNH-MKDKFGFDPETEHYGS-LVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILS 546
Query: 158 GYMRRGDIESAVRMFDEM 175
DIE+A E+
Sbjct: 547 ACRGGEDIETAELALTEL 564
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 151/365 (41%), Positives = 237/365 (64%), Gaps = 1/365 (0%)
Query: 117 NVMVGTALLDMYAK-FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM 175
+V+ + ++D Y K G ++ A V FD+M + +WN+MIDGY + G++E A +FD+M
Sbjct: 206 DVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFDKM 265
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
++ ISW+ +++G+ + +EAL FR+M G++PD V+++ ++AC+ +G L G
Sbjct: 266 LQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGR 325
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
WIH Y+ + ++ V L+D+Y +CG + AR++F M +R +VSWN +IVG +NG
Sbjct: 326 WIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMNG 385
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
F EALE F M+ E D + F G L ACSHA L+ +GL F+ MK +YR+ P++EHY
Sbjct: 386 FGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHY 445
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
GC+VDL RAG+L+ N++++MPMKPN + GSLL ACR ++ LAE +++ L +L
Sbjct: 446 GCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKA 505
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
YVL++N+YA VG W+G +IR+ MK R ++K G S IE+ + EF++G++SHI
Sbjct: 506 DDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHI 565
Query: 476 ESEHI 480
E I
Sbjct: 566 LREEI 570
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 151/363 (41%), Gaps = 51/363 (14%)
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
+ +L ++A+ +L + F A R+ S + ++ A +F ++ ++
Sbjct: 25 SQILQIHAQLITTNLISDTFAASRLLDSVVSKTL--------NVNYAELVFAQIHQPNSF 76
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
++ + + E AL + EM+ G+ D T VL AC + L G +
Sbjct: 77 ICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEA 136
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
+K+ F +V V N LI +Y RCG +AR VF ++ LVSWNS++ G+ G + A
Sbjct: 137 VKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQ 196
Query: 302 EYFNSMQK----------EGFKP------------------DGVSFTGALTACSHAGLIE 333
F+ M + +G+ D VS+ + + G +E
Sbjct: 197 NMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEME 256
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSL 390
FD M + + + ++D Y++ ++ALN+ M +KP+ V +
Sbjct: 257 VAREIFDKM-----LQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGA 311
Query: 391 LAACRTKGDIILAERLMKYL----VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKG 446
++AC G + + Y+ + LD V + L +MY G D A +I +M
Sbjct: 312 VSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTA---LVDMYLKCGSRDEARRIFNSMPE 368
Query: 447 RGI 449
R +
Sbjct: 369 RNV 371
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/437 (37%), Positives = 250/437 (57%), Gaps = 31/437 (7%)
Query: 64 AALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTA 123
AA F M PN TF LL CA P +G H K G + V
Sbjct: 110 AAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSP-DVGLQAHAAALKFGFATDQ-YVSNT 167
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
L+ MY+ FG G++ GD A +FD MP A++W
Sbjct: 168 LIHMYSCFG------------------------GGFL--GD---ARNVFDRMPKESAVTW 198
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
+A++ G+V+ G +A++ FREMQ +GV+ D VT+I VL A ++G L + W+ R+V +
Sbjct: 199 SAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVER 258
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
+ +V +CN LID ++CG ++ A VF+ M +R++VSW S+I A+ G EA+
Sbjct: 259 EGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRV 318
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F M+ G PD V+F G LTACSHAG++++G YFD MK Y + P+IEHYGC+VD++
Sbjct: 319 FEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFG 378
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
RAG +E A+ V MP++PN V+ SL++ACR G + L E + + L+ P ++NY++
Sbjct: 379 RAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIM 438
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSM 483
L+N++A +W +IRR M RGI+K PG S +E+ +HEF+AGD SH + + IY M
Sbjct: 439 LSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRM 498
Query: 484 LELLSFDLKLCGYVPET 500
+E ++ +L+ G++ T
Sbjct: 499 VEEMARELRRVGHIAAT 515
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 113/253 (44%), Gaps = 36/253 (14%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I + R G ++A F M +G + +T I +L+ D + L L +
Sbjct: 195 AVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGA--LELARWV 252
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
V + G+ ++ V + AL+D AK G +D A VF+ M+ +S +W ++ID G
Sbjct: 253 RRFVEREGIGKS-VTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGR 311
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ AVR+F+ EM+++GV PD V I VL A
Sbjct: 312 GKEAVRVFE-------------------------------EMKVAGVPPDDVAFIGVLTA 340
Query: 225 CANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLV 282
C++ G + G + ++ + ++ ++D++ R G +E A + + M + V
Sbjct: 341 CSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPV 400
Query: 283 SWNSIIVGFAVNG 295
W S++ +G
Sbjct: 401 IWRSLVSACRAHG 413
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/461 (36%), Positives = 263/461 (57%), Gaps = 5/461 (1%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
N W + IS + G EA +M G + IT+ T++S CA+ S +G
Sbjct: 252 NLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGS--FQMGK 309
Query: 103 MIHGLVCKLGLDRNN---VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+H + K L+ N+ + V AL+ +Y K ++D A +F AM V++ TWNA++ GY
Sbjct: 310 QVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGY 369
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ G +E A F+EMPV++ ++ T +++G + G+ +E L+ F++M++ G EP
Sbjct: 370 VNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFA 429
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L AC+ +G L G +H ++ ++ ++ V N +I +Y++CG +E A VF M
Sbjct: 430 GALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSV 489
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
LVSWNS+I +G +A+E F+ M KEG PD ++F LTACSHAGL+E G YF
Sbjct: 490 DLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYF 549
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
+ M + Y ++P +HY +VDL+ RAG A V+++MP KP V +LLA CR G+
Sbjct: 550 NSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGN 609
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L + L L P D YVLL+N+YA VG+W+ K+R+ M+ + ++K+P S IE
Sbjct: 610 MDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIE 669
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ + +H FM D H E +Y LE L ++K GY+P+T
Sbjct: 670 VENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDT 710
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 198/423 (46%), Gaps = 54/423 (12%)
Query: 36 NNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADF-- 93
N + + +V + + I+ + +G A F M P+ TF ++LS F
Sbjct: 103 NGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVG 162
Query: 94 -PSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR--------MDLATVVFDAM 144
QC +H V K G+ + V ALL +Y K M A +FD M
Sbjct: 163 NEQQC----GQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEM 218
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFR 204
+ TW MI GY+R D+ A +F+ M +W A+++G+V G F+EAL R
Sbjct: 219 PKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCR 278
Query: 205 EMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC----NTLIDLY 260
+M+ G++ D +T ++++ACANVG+ +G +H Y+LK + N C N LI LY
Sbjct: 279 KMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLY 338
Query: 261 SRCGCIEFARQVFQRMHKRTLVSWNSIIVGF----------------------------- 291
+ ++ AR++F M R +++WN+I+ G+
Sbjct: 339 CKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMIS 398
Query: 292 --AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRV 348
A NGF E L+ F M+ +GF+P +F GALTACS G +E+G + + ++ Y
Sbjct: 399 GLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYES 458
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
S + + ++ +Y++ G +E A +V MP + V S++AA G + A L
Sbjct: 459 SLSVGN--AMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQHGHGVKAIELFD 515
Query: 409 YLV 411
++
Sbjct: 516 QML 518
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 133/335 (39%), Gaps = 77/335 (22%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV--RDAI 181
LL+MY K + A +F+ + + +I Y G++E +F+ P+ RD++
Sbjct: 54 LLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSV 113
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA---------------CA 226
+ A++ G+ G ALE FR M+ PD T SVL+A CA
Sbjct: 114 FYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCA 173
Query: 227 NVGT-----------------------LGI---GLWIHRYVLKQDFKDNVKVCNTLIDLY 260
V T LGI + R + + K + T+I Y
Sbjct: 174 VVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGY 233
Query: 261 SRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT 320
R + AR+VF+ M + +WN++I G+ G EAL M+ G + D +++T
Sbjct: 234 VRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYT 293
Query: 321 GALTACSHAGLIEDGLRY--------------------------------FDIMKKIYRV 348
++AC++ G + G + D +KI+
Sbjct: 294 TIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYA 353
Query: 349 SP--RIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
P I + I+ Y AGR+E+A + E MP+K
Sbjct: 354 MPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVK 388
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 33/122 (27%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR--------------------- 275
+H +++ FK N L+++Y + + +ARQ+F+
Sbjct: 35 VHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGN 94
Query: 276 ------------MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
++ R V +N++I G+A NG ALE F +M+++ F+PD +FT L
Sbjct: 95 LELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVL 154
Query: 324 TA 325
+A
Sbjct: 155 SA 156
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/455 (38%), Positives = 249/455 (54%), Gaps = 34/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ WT I + +SG EA +M G PN IT++++L+ CA + H
Sbjct: 196 ISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRH 255
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L L LD V VGTAL+ MYAK G +D A VV
Sbjct: 256 ALDAGLELD---VRVGTALVQMYAKSGSIDDARVV------------------------- 287
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
FD M VRD +SW ++ F + G EA + F +MQ G +PD + +S+LNAC
Sbjct: 288 ------FDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNAC 341
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A+ G L IHR+ L + +V+V L+ +YS+ G I+ AR VF RM R +VSWN
Sbjct: 342 ASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWN 401
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G A +G +ALE F M G KPD V+F L+ACSHAGL+++G + M ++
Sbjct: 402 AMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQV 461
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P + H C+VDL RAGRL +A ++NM + P+E G+LL +CRT G++ L E
Sbjct: 462 YGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGEL 521
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ K + LDP + YVLL+N+YA GKWD +R M+ RGI+K+PG S IE+ + IH
Sbjct: 522 VAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIH 581
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+F+ D SH E + I + + +K GY+P+T
Sbjct: 582 DFLVADSSHPECKEINESKDKVIEKIKAEGYIPDT 616
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 165/342 (48%), Gaps = 51/342 (14%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I+ + +A F M G PN T++ +L CA + L G +H
Sbjct: 97 WNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSA--LKWGKEVHAC 154
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ GL+ ++V VGTALL MY K G I
Sbjct: 155 IRHGGLE-SDVRVGTALLRMYGKCG-------------------------------SINE 182
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A R+FD + D ISWT ++ + + G +EA +M+ G +P+ +T +S+LNACA+
Sbjct: 183 ARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACAS 242
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G L +HR+ L + +V+V L+ +Y++ G I+ AR VF RM R +VSWN +
Sbjct: 243 EGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVM 302
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I FA +G EA + F MQ EG KPD + F L AC+ AG +E +KKI+R
Sbjct: 303 IGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALE-------WVKKIHR 355
Query: 348 --------VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
V R+ +V +YS++G ++DA V + M ++
Sbjct: 356 HALDSGLEVDVRVG--TALVHMYSKSGSIDDARVVFDRMKVR 395
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 163/344 (47%), Gaps = 48/344 (13%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+++ N ++ Y+ G ++ A +FD + + SW A++ G+V+ + E+A+ FREM
Sbjct: 61 QNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREM 120
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
GV+P+ T + +L ACA++ L G +H + + +V+V L+ +Y +CG I
Sbjct: 121 CHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSI 180
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
AR++F + ++SW +I +A +G EA M++EGFKP+ +++ L AC
Sbjct: 181 NEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNAC 240
Query: 327 SHAGLIEDGLRYFDIMKKIYR------VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM 380
+ G ++ +K+++R + + +V +Y+++G ++DA V + M +
Sbjct: 241 ASEGALK-------WVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKV 293
Query: 381 ----------------------------------KPNEVVLGSLLAACRTKGDIILAERL 406
KP+ ++ S+L AC + G + +++
Sbjct: 294 RDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKI 353
Query: 407 MKYLVDLDPGVDSNY-VLLANMYAAVGKWDGAGKIRRTMKGRGI 449
++ +D VD L +MY+ G D A + MK R +
Sbjct: 354 HRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNV 397
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 109/239 (45%), Gaps = 35/239 (14%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+ V V W I GR EA F +M G P+ I F+++L+ CA +
Sbjct: 290 RMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEW 349
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
H L L +D V VGTAL+ MY+K G +D A VVFD M+V++ +WNAMI
Sbjct: 350 VKKIHRHALDSGLEVD---VRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMI-- 404
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+G + G ++ALE FR M GV+PD VT
Sbjct: 405 -----------------------------SGLAQHGLGQDALEVFRRMTAHGVKPDRVTF 435
Query: 219 ISVLNACANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
++VL+AC++ G + G + + + + +V CN ++DL R G + A+ M
Sbjct: 436 VAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNM 494
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 44/279 (15%)
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G+ D + VL C L +H ++K + N V N L+ +Y CG ++ A
Sbjct: 23 GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEA 82
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-- 327
R VF + K++ SWN++I G+ + +A+ F M EG +P+ ++ L AC+
Sbjct: 83 RCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASL 142
Query: 328 --------------HAGL-------------------IEDGLRYFDIMKKIYRVSPRIEH 354
H GL I + R FD + ++ I
Sbjct: 143 SALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL-----MNHDIIS 197
Query: 355 YGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
+ ++ Y+++G ++A ++ M KPN + S+L AC ++G + +R+ ++ +
Sbjct: 198 WTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHAL 257
Query: 412 DLDPGVDSNY-VLLANMYAAVGKWDGAGKIRRTMKGRGI 449
D +D L MYA G D A + MK R +
Sbjct: 258 DAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDV 296
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/466 (37%), Positives = 260/466 (55%), Gaps = 34/466 (7%)
Query: 34 QTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADF 93
Q N +S+ TV T+ IS + +G+ EA F + P +TF ++ A
Sbjct: 315 QKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGL 374
Query: 94 PSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWN 153
+ L LG +HG + K LD VG+A+LDMYAK GR+DL
Sbjct: 375 AA--LNLGKELHGSIIKTKLDEK-CHVGSAILDMYAKCGRLDL----------------- 414
Query: 154 AMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEP 213
A R+F+ + +DAI W +++ + G EA+ FR+M + G
Sbjct: 415 --------------ACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRY 460
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
D V+I L+ACAN+ L G IH ++K + ++ ++LID+Y++CG + F+R+VF
Sbjct: 461 DCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVF 520
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
RM ++ VSWNSII + +G + E L F+ M + G +PD V+F G ++AC HAG ++
Sbjct: 521 DRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVD 580
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
+G+RY+ +M + Y + R+EHY C+ D++ RAGRL +A + +MP P+ V G+LL A
Sbjct: 581 EGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGA 640
Query: 394 CRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKP 453
C G++ LAE K+L DLDP YVLLAN+ A GKW K+R MK RG++K P
Sbjct: 641 CHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVP 700
Query: 454 GLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
G S IE+ + H F+A D SH + IYS+L+ L +LK GYVP+
Sbjct: 701 GYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQ 746
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 137/279 (49%), Gaps = 34/279 (12%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W I G+ A L + +M G +P+ TF ++ C S + +G ++
Sbjct: 23 TSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKS--VKMGKIV 80
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V +GL + +V VG++L+ +YA+ G
Sbjct: 81 HETVNLMGL-KEDVFVGSSLIKLYAE-------------------------------NGH 108
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A +FD +P +D++ W +LNG+VK G A++ F EM+ S ++P+ VT VL+
Sbjct: 109 LSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSV 168
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA+ L +G +H + + + V NTL+ +YS+C C++ AR++F + + LVSW
Sbjct: 169 CASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSW 228
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
N II G+ NG +GEA F M G KPD ++F L
Sbjct: 229 NGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFL 267
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 190/403 (47%), Gaps = 47/403 (11%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W IS + ++G + EA F M G P+ ITF + L + S L IH
Sbjct: 226 VSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLS--LKHCKEIH 283
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G + + + +LD++ K +A+ID Y + D+
Sbjct: 284 GYIIRHAV----------VLDVFLK----------------------SALIDIYFKCRDV 311
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A + + D + T +++G+V G +EALE FR + ++P VT S+ A
Sbjct: 312 EMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAF 371
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A + L +G +H ++K + V + ++D+Y++CG ++ A +VF R+ ++ + WN
Sbjct: 372 AGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWN 431
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S+I + NG GEA+ F M EG + D VS +GAL+AC++ + G +M K
Sbjct: 432 SMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIK- 490
Query: 346 YRVSP-RIEHYG--CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
P R + Y ++D+Y++ G L + V + M K NEV S+++A GD L
Sbjct: 491 ---GPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEK-NEVSWNSIISAYGNHGD--L 544
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
E L + L G+ ++V + +A G AG++ ++
Sbjct: 545 KECLALFHEMLRNGIQPDHVTFLGIISACGH---AGQVDEGIR 584
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 164/360 (45%), Gaps = 48/360 (13%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W ++ + ++G A F M PN +TF +LS CA L LG +
Sbjct: 124 SVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCAS--EAMLDLGTQL 181
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG+ GL+ ++ + T LL MY+K +
Sbjct: 182 HGIAVGCGLELDSPVANT-LLAMYSKCQCL------------------------------ 210
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++A ++FD +P D +SW +++G+V+ G EA FR M +G++PD +T S L
Sbjct: 211 -QAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPC 269
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
+ +L IH Y+++ +V + + LID+Y +C +E A++ + V
Sbjct: 270 VNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVC 329
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G+ +NG EALE F + +E KP V+F+ A + GL ++ K+
Sbjct: 330 TTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFA-------GLAALNLGKE 382
Query: 345 IY------RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
++ ++ + I+D+Y++ GRL+ A V + K + + S++ +C G
Sbjct: 383 LHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEK-DAICWNSMITSCSQNG 441
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 95/183 (51%)
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y+R G ++ A +F + + +W ++ GF G F AL + +M +GV PD T
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
V+ AC + ++ +G +H V K++V V ++LI LY+ G + A+ +F + +
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ V WN ++ G+ NG G A++ F M+ KP+ V+F L+ C+ +++ G +
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQL 181
Query: 339 FDI 341
I
Sbjct: 182 HGI 184
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 14/147 (9%)
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
+Y R G ++ A+ +F + +WN +I GF + G AL ++ M G PD +
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYR------VSPRIEHYGCIVDLYSRAGRLEDAL 372
F + AC GL+ + K ++ + + ++ LY+ G L DA
Sbjct: 61 FPYVVKACC-------GLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQ 113
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGD 399
+ +N+P K + V+ +L GD
Sbjct: 114 YLFDNIPQK-DSVLWNVMLNGYVKNGD 139
>gi|356573508|ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Glycine max]
Length = 629
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/424 (39%), Positives = 256/424 (60%), Gaps = 8/424 (1%)
Query: 81 ITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVV 140
+ I L C+ L +H V K G R+ ++ ++D Y K G + A V
Sbjct: 114 VALICALGACSKLGDSNLV--PQMHVGVVKFGFLRHTKVL-NGVMDGYVKCGLVGEARRV 170
Query: 141 FDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEAL 200
F+ + S +W +++G ++ +ES +FDEMP R+ ++WT L+ G+V G+ +EA
Sbjct: 171 FEEIEEPSVVSWTVVLEGVVKCEGVESGKVVFDEMPERNEVAWTVLIKGYVGSGFTKEAF 230
Query: 201 ECFREMQIS---GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD-NVKVCNTL 256
+EM G + +T+ SVL+AC+ G + +G W+H Y +K D V V +L
Sbjct: 231 LLLKEMVFGCGFGFGLNSITLCSVLSACSQSGDVSVGRWVHCYAVKAVGWDLGVMVGTSL 290
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
+D+Y++CG I A VF+ M +R +V+WN+++ G A++G +E F M +E KPD
Sbjct: 291 VDMYAKCGRISAALMVFRHMPRRNVVAWNAMLCGLAMHGMGKVVVEMFACMVEE-VKPDA 349
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
V+F L++CSH+GL+E G +YF +++ Y + P IEHY C+VDL RAGRLE+A ++V+
Sbjct: 350 VTFMALLSSCSHSGLVEQGWQYFHDLERAYGIRPEIEHYACMVDLLGRAGRLEEAEDLVK 409
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDG 436
+P+ PNEVVLGSLL AC G + L E++M+ LV +DP ++LL+NMYA GK D
Sbjct: 410 KLPIPPNEVVLGSLLGACYAHGKLRLGEKIMRELVQMDPLNTEYHILLSNMYALCGKADK 469
Query: 437 AGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGY 496
A +R+ +K RGI+K PG+SSI + +H F+AGD+SH + IY L+ + L+L GY
Sbjct: 470 ANSLRKVLKNRGIRKVPGMSSIYVDGQLHRFIAGDKSHPRTADIYMKLDDMICKLRLAGY 529
Query: 497 VPET 500
VP T
Sbjct: 530 VPNT 533
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 157/387 (40%), Gaps = 83/387 (21%)
Query: 133 RMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV--RDAISWTALLNGF 190
++ A V + SSF NA++ Y A ++FD +P +D++ +TAL
Sbjct: 33 QLHAAATVSGLLFSPSSFLLNALLHLYASCPLPSHARKLFDRIPHSHKDSVDYTAL---- 88
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
++ + +AL + +M+ + D V +I L AC+ +G + +H V+K F +
Sbjct: 89 IRCSHPLDALRFYLQMRQRALPLDGVALICALGACSKLGDSNLVPQMHVGVVKFGFLRHT 148
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQ-------------------------------RMHKR 279
KV N ++D Y +CG + AR+VF+ M +R
Sbjct: 149 KVLNGVMDGYVKCGLVGEARRVFEEIEEPSVVSWTVVLEGVVKCEGVESGKVVFDEMPER 208
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQ---KEGFKPDGVSFTGALTACSHAGLIEDGL 336
V+W +I G+ +GF EA M GF + ++ L+ACS +G + G
Sbjct: 209 NEVAWTVLIKGYVGSGFTKEAFLLLKEMVFGCGFGFGLNSITLCSVLSACSQSGDVSVGR 268
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP----------------- 379
K + +VD+Y++ GR+ AL V +MP
Sbjct: 269 WVHCYAVKAVGWDLGVMVGTSLVDMYAKCGRISAALMVFRHMPRRNVVAWNAMLCGLAMH 328
Query: 380 ----------------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD------PGV 417
+KP+ V +LL++C G L E+ +Y DL+ P +
Sbjct: 329 GMGKVVVEMFACMVEEVKPDAVTFMALLSSCSHSG---LVEQGWQYFHDLERAYGIRPEI 385
Query: 418 DSNYVLLANMYAAVGKWDGAGKIRRTM 444
+ +Y + ++ G+ + A + + +
Sbjct: 386 E-HYACMVDLLGRAGRLEEAEDLVKKL 411
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/461 (36%), Positives = 263/461 (57%), Gaps = 5/461 (1%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
N W + IS + G EA +M G + IT+ T++S CA+ S +G
Sbjct: 252 NLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGS--FQMGK 309
Query: 103 MIHGLVCKLGLDRNN---VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+H + K L+ N+ + V AL+ +Y K ++D A +F AM V++ TWNA++ GY
Sbjct: 310 QMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGY 369
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ G +E A F+EMPV++ ++ T +++G + G+ +E L+ F++M++ G EP
Sbjct: 370 VNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFA 429
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L AC+ +G L G +H ++ ++ ++ V N +I +Y++CG +E A VF M
Sbjct: 430 GALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSV 489
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
LVSWNS+I +G +A+E F+ M KEG PD ++F LTACSHAGL+E G YF
Sbjct: 490 DLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYF 549
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
+ M + Y ++P +HY +VDL+ RAG A V+++MP KP V +LLA CR G+
Sbjct: 550 NSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGN 609
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L + L L P D YVLL+N+YA VG+W+ K+R+ M+ + ++K+P S IE
Sbjct: 610 MDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIE 669
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ + +H FM D H E +Y LE L ++K GY+P+T
Sbjct: 670 VENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDT 710
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 198/423 (46%), Gaps = 54/423 (12%)
Query: 36 NNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADF-- 93
N + + +V + + I+ + +G A F M P+ TF ++LS F
Sbjct: 103 NGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVG 162
Query: 94 -PSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR--------MDLATVVFDAM 144
QC +H V K G+ + V ALL +Y K M A +FD M
Sbjct: 163 NEQQC----GQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEM 218
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFR 204
+ TW MI GY+R D+ A +F+ M +W A+++G+V G F+EAL R
Sbjct: 219 PKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCR 278
Query: 205 EMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC----NTLIDLY 260
+M+ G++ D +T ++++ACANVG+ +G +H Y+LK + N C N LI LY
Sbjct: 279 KMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLY 338
Query: 261 SRCGCIEFARQVFQRMHKRTLVSWNSIIVGF----------------------------- 291
+ ++ AR++F M R +++WN+I+ G+
Sbjct: 339 CKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMIS 398
Query: 292 --AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRV 348
A NGF E L+ F M+ +GF+P +F GALTACS G +E+G + + ++ Y
Sbjct: 399 GLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYES 458
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
S + + ++ +Y++ G +E A +V MP + V S++AA G + A L
Sbjct: 459 SLSVGN--AMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQHGHGVKAIELFD 515
Query: 409 YLV 411
++
Sbjct: 516 QML 518
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 133/335 (39%), Gaps = 77/335 (22%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV--RDAI 181
LL+MY K + A +F+ + + +I Y G++E +F+ P+ RD++
Sbjct: 54 LLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSV 113
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA---------------CA 226
+ A++ G+ G ALE FR M+ PD T SVL+A CA
Sbjct: 114 FYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCA 173
Query: 227 NVGT-----------------------LGI---GLWIHRYVLKQDFKDNVKVCNTLIDLY 260
V T LGI + R + + K + T+I Y
Sbjct: 174 VVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGY 233
Query: 261 SRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT 320
R + AR+VF+ M + +WN++I G+ G EAL M+ G + D +++T
Sbjct: 234 VRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYT 293
Query: 321 GALTACSHAGLIEDGLRY--------------------------------FDIMKKIYRV 348
++AC++ G + G + D +KI+
Sbjct: 294 TIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYA 353
Query: 349 SP--RIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
P I + I+ Y AGR+E+A + E MP+K
Sbjct: 354 MPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVK 388
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 33/130 (25%)
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR------------- 275
+ + +H +++ FK N L+++Y + + +ARQ+F+
Sbjct: 27 ASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLI 86
Query: 276 --------------------MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
++ R V +N++I G+A NG ALE F +M+++ F+PD
Sbjct: 87 TAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPD 146
Query: 316 GVSFTGALTA 325
+FT L+A
Sbjct: 147 DFTFTSVLSA 156
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 273/468 (58%), Gaps = 8/468 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I + ++G ++EA F M G + T ++LL C+ + L +G ++
Sbjct: 180 VVSWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGN--LEVGRLV 237
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + G R + ++G ALLDMY K G + +A FD M +K+ TW +M+ + G
Sbjct: 238 HCHMLVSG-SRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGS 296
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+++ F++MP R+ +SW A+++ +V+ G E L+ + M+ G+ PD T+ VL+A
Sbjct: 297 VDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSA 356
Query: 225 CANVGTLGIGLWIHRYVLKQDFKD-NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
C G L G IH YV + +F D V + N+L+D+Y+RCG ++ A +F M + ++S
Sbjct: 357 CGQNGDLASGKMIHCYV-RDNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVIS 415
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN II A++G E + +F +M + F PD ++F G L+ACSH GL+E G YF+ M
Sbjct: 416 WNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMA 475
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
++Y V P +EHYGC+VDL R G L A+N++++M +KP+ VV G+LL ACR G++ +
Sbjct: 476 RVYNVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIKPDVVVWGALLGACRIHGNVEIG 535
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
+ ++K L++L+ +VL+ N++ +W+ K+R+ MK +G +K G+SSIE+ +
Sbjct: 536 KLVIKQLLELEGITGGLFVLICNLFYETNQWEDMKKLRKLMKEQGTKKDMGVSSIEVKNI 595
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSF---DLKLCGYVPETVAGELYEN 508
IHEF D H + IY+ ++ LS+ L + PE + GE N
Sbjct: 596 IHEFGVEDLRHESTNEIYAAVDQLSYHLVSLHVLAVQPEELIGEERNN 643
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 157/370 (42%), Gaps = 70/370 (18%)
Query: 63 EAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG 121
+ AL R L G PN T +L C + L A HG+V KLG
Sbjct: 96 QEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEHALAA--HGVVVKLGF-------- 145
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
V+ F NA++ + G + + R F EM R+ +
Sbjct: 146 ------------------------VQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVV 181
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
SW ++ G+ + G EA F EM+ G+ D T++S+L AC++ G L +G +H ++
Sbjct: 182 SWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHM 241
Query: 242 LKQDFKDNVKVCNTLIDLYSRC-------------------------------GCIEFAR 270
L + + + N L+D+Y +C G ++ R
Sbjct: 242 LVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVR 301
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
F++M +R +VSWN++I + G + E L+ +N M+ G PD + G L+AC G
Sbjct: 302 DWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNG 361
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK---PNEVVL 387
+ G ++ + P + ++D+Y+R G+++ A+ + MP K V++
Sbjct: 362 DLASGKMIHCYVRDNFN-DPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVII 420
Query: 388 GSLLAACRTK 397
G+L R +
Sbjct: 421 GALAMHGRAQ 430
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 114/241 (47%), Gaps = 4/241 (1%)
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R G + A R+FD +P D + L+ + +EAL R + G+ P+ T+
Sbjct: 60 RDGGLCHARRLFDRIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPF 119
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VL AC V + L H V+K F + V N L+ ++ G + +R+ F M R
Sbjct: 120 VLKACTTVRAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRN 179
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYF 339
+VSWN++I G+A G V EA F M+ +G D + L ACS G +E G L +
Sbjct: 180 VVSWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHC 239
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
++ RV + + ++D+Y + G L A + MP+K N V S+L A G
Sbjct: 240 HMLVSGSRVDRILGN--ALLDMYGKCGDLWMAHRCFDMMPIK-NVVTWTSMLCAQAKHGS 296
Query: 400 I 400
+
Sbjct: 297 V 297
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/467 (38%), Positives = 270/467 (57%), Gaps = 44/467 (9%)
Query: 43 NP-TVQWTSSISRHCRS-GRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLF 99
NP + W + I RS R A + RM G+ + TF +L CA + L
Sbjct: 88 NPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFA--LS 145
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
G IH + KLG D ++V + +L+ YA R+D A VFD
Sbjct: 146 EGEQIHAQILKLGFD-SDVYINNSLVHFYATCDRLDFAKGVFD----------------- 187
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
M R +SW +++ FV+ G F+ AL F EMQ EPD TI
Sbjct: 188 --------------RMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQ-KFFEPDGYTIQ 232
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQ---DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
S+ NACA +G+L +G+W H ++LK+ D ++V + +L+D+Y +CG +E A Q+F RM
Sbjct: 233 SIANACAGMGSLSLGMWAHVFLLKKFDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRM 292
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDG 335
KR + SWNS+I+GF+ +G V ALEYF M + E P+ ++F G L+AC+H GL+ +G
Sbjct: 293 PKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEG 352
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLL-AAC 394
RYFD+M Y++ P +EHYGC+VDL +RAG +++AL+VV NMPM+P+ V+ SLL A C
Sbjct: 353 RRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACC 412
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSN-YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKP 453
+ + L+E + + +++ + GV S YVLL+ +YA+ +W+ G +R+ M +G+ K+P
Sbjct: 413 KQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEP 472
Query: 454 GLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
G SSIEI HEF AGD SH ++E IYS L+++ ++ GY P++
Sbjct: 473 GCSSIEIDGVAHEFFAGDTSHPQTEEIYSALDVIEERVERVGYSPDS 519
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 126/258 (48%), Gaps = 16/258 (6%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKR-GYFEEALECFREMQISG-VEPDYVTIISV 221
D+ A R+F ++ ++ W AL+ + + A+ + M G V D T V
Sbjct: 75 DLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFV 134
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L ACA + L G IH +LK F +V + N+L+ Y+ C ++FA+ VF RM +R+L
Sbjct: 135 LKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSL 194
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSWN +I F G AL F MQK F+PDG + AC+ G + G+
Sbjct: 195 VSWNVVIDAFVRFGEFDAALNLFGEMQK-FFEPDGYTIQSIANACAGMGSLSLGMWAHVF 253
Query: 342 MKKIY---RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVL-----GS 389
+ K + RV+ + + +VD+Y + G LE AL + MP + N ++L G
Sbjct: 254 LLKKFDADRVNDVLLNTS-LVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGE 312
Query: 390 LLAACRTKGDIILAERLM 407
+ AA G ++ E+LM
Sbjct: 313 VAAALEYFGCMVRTEKLM 330
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 183/486 (37%), Positives = 271/486 (55%), Gaps = 8/486 (1%)
Query: 28 TPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLL 87
T ++ QT + +N V W IS RSG +A L F M L G P+ + ++L
Sbjct: 159 TKELFYQTRDLGVELN-LVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVL 217
Query: 88 SGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK 147
D +G IH V K GL + +V +AL+DMY K + VF+ M
Sbjct: 218 PAVGDLDMP--LMGIQIHCYVIKQGLGPDKFVV-SALIDMYGKCACASEMSGVFNEMDEV 274
Query: 148 SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD--AISWTALLNGFVKRGYFEEALECFRE 205
NA++ G R G +++A+ +F + D +SWT+++ + G EALE FRE
Sbjct: 275 DVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFRE 334
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
MQI GV+P+ VTI +L AC N+ L G H + L+ ++V V + LID+Y++CG
Sbjct: 335 MQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGR 394
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+ +R F M R LVSWNS++ G+A++G EA+ F MQ+ G KPD VSFT L+A
Sbjct: 395 MLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSA 454
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
C+ GL E+G YFD M + + V R+EHY C+V L R+GRLE+A +++ MP +P+
Sbjct: 455 CTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSC 514
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
V G+LL++CR + L E K + +L+P NY+LL+N+YA+ W +R M+
Sbjct: 515 VWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMR 574
Query: 446 GRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET--VAG 503
RG++K PG S IEI + +H +AGD SH + I L L+ ++K GYVP T V
Sbjct: 575 SRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQ 634
Query: 504 ELYEND 509
++ E D
Sbjct: 635 DVEEQD 640
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 168/355 (47%), Gaps = 32/355 (9%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH--GLVCKLGLDRNNVMVGTALL 125
F+ M G P+ T++ CA + L G +H LV LGLD +V ++LL
Sbjct: 62 FSYMLTQGIVPDSRVLPTVIKTCAALSA--LQTGKQMHCFALVSGLGLDS---VVLSSLL 116
Query: 126 DMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD------ 179
MY +F + A VFD + T +A+I + R+G ++ +F + RD
Sbjct: 117 HMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQ--TRDLGVELN 174
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHR 239
+SW +++GF + G + +A+ F+ M + G++PD ++ SVL A ++ +G+ IH
Sbjct: 175 LVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHC 234
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
YV+KQ + V + LID+Y +C C VF M + + + N+++ G + NG V
Sbjct: 235 YVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDN 294
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
ALE F Q +G + VS+T + +CS G + L F M +I V P C++
Sbjct: 295 ALEVFK--QFKGMDLNVVSWTSMIASCSQNGKDMEALELFREM-QIEGVKPNSVTIPCLL 351
Query: 360 D--------LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
L+ +A N + N+V +GS L K +LA RL
Sbjct: 352 PACGNIAALLHGKAAHCFSLRNGIF------NDVYVGSALIDMYAKCGRMLASRL 400
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 122/327 (37%), Gaps = 78/327 (23%)
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
++ IS + F K +F + F M G+ PD + +V+ CA + L G
Sbjct: 36 LKTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQ 95
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR----------------- 279
+H + L + V ++L+ +Y + ++ AR VF ++ +
Sbjct: 96 MHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGR 155
Query: 280 ------------------TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
LVSWN +I GF +G +A+ F +M EG KPDG S +
Sbjct: 156 VKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSS 215
Query: 322 ALTACS-----------HAGLIEDGLRYFDIMKKIYRVSPRIEHYG-------------- 356
L A H +I+ GL + VS I+ YG
Sbjct: 216 VLPAVGDLDMPLMGIQIHCYVIKQGLG-----PDKFVVSALIDMYGKCACASEMSGVFNE 270
Query: 357 ----------CIVDLYSRAGRLEDALNVVENMP-MKPNEVVLGSLLAACRTKGDIILAER 405
+V SR G +++AL V + M N V S++A+C G + A
Sbjct: 271 MDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALE 330
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVG 432
L + + GV N V + + A G
Sbjct: 331 LFREMQ--IEGVKPNSVTIPCLLPACG 355
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 162/434 (37%), Positives = 258/434 (59%), Gaps = 4/434 (0%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+T+M P++ITF L+ + +C+ +G H + + G +N+V V +L+ M
Sbjct: 107 YTQMLKSRIWPDNITFPFLIKASTEM--ECVVVGEQTHSQIVRFGF-QNDVYVENSLVHM 163
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YA G + A +F M + +W +M+ GY + G +E A MFDEMP R+ +W+ ++
Sbjct: 164 YANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMI 223
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
NG+ K FE+A++ F M+ GV + ++SV+++CA++G L G H YV+K
Sbjct: 224 NGYAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMT 283
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
N+ + L+D+Y RCG IE A +VF+ + + +SW+SII G AV+G +A+ YF+ M
Sbjct: 284 VNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQM 343
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+ GF P ++ T L+ACSH GL++ GL ++ MK+ Y + PR+EHYGCIVD+ RAG+
Sbjct: 344 VRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGK 403
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
L +A N + MP+KPN +LG+LL AC+ + +AER+ L+++ P YVLL+N+
Sbjct: 404 LAEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNI 463
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF-MAGDRSHIESEHIYSMLEL 486
YA G+W+ +R MK + ++K PG S IEI I++F M D+ H E I + E
Sbjct: 464 YACAGQWEKLESLRDIMKEKLVKKPPGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEE 523
Query: 487 LSFDLKLCGYVPET 500
+ ++L GY T
Sbjct: 524 ILGKIRLIGYKGNT 537
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 140/329 (42%), Gaps = 60/329 (18%)
Query: 84 ITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDA 143
+ LL C+ F +IHG + + L ++V V + LL LA V D
Sbjct: 16 LALLQSCSSFSDL-----KIIHGFLLRTHLI-SDVFVASRLLA---------LALCVDD- 59
Query: 144 MRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF 203
S+F + GY A +F ++ + + L+ F +A +
Sbjct: 60 ----STFHKPTNLLGY--------AYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFY 107
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS-- 261
+M S + PD +T ++ A + + +G H +++ F+++V V N+L+ +Y+
Sbjct: 108 TQMLKSRIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANC 167
Query: 262 -----------------------------RCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
+CG +E AR++F M R L +W+ +I G+A
Sbjct: 168 GLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYA 227
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
N +A++ F M++EG + +++C+H G +E G R + + K + I
Sbjct: 228 KNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLI 287
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+VD+Y R G +E A+ V E +P K
Sbjct: 288 LGTA-LVDMYWRCGEIEKAIRVFEELPDK 315
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 44/250 (17%)
Query: 45 TVQWTSSISRHCRSGRIAEA------------------------------ALE-FTRMTL 73
V WTS ++ +C+ G + +A A++ F M
Sbjct: 185 VVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKR 244
Query: 74 HGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR 133
G N ++++S CA + L G H V K + N+++GTAL+DMY + G
Sbjct: 245 EGVVANETVMVSVISSCAHLGA--LEFGERAHEYVVKSHMTV-NLILGTALVDMYWRCGE 301
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM-----PVRDAISWTALLN 188
++ A VF+ + K S +W+++I G G A+ F +M RD I+ TA+L+
Sbjct: 302 IEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRD-ITLTAVLS 360
Query: 189 GFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
G ++ LE + M+ G+EP +++ G L ++LK K
Sbjct: 361 ACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEA---ENFILKMPVK 417
Query: 248 DNVKVCNTLI 257
N + L+
Sbjct: 418 PNAPILGALL 427
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/486 (34%), Positives = 257/486 (52%), Gaps = 40/486 (8%)
Query: 52 ISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKL 111
I + +G E F M P+H TF +L C+ S + +G IHG K+
Sbjct: 113 IRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACS--CSGNIVIGKKIHGSATKV 170
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR- 170
GL + + VG L+ MY K G + A +V D M + +WN+++ GY + + A+
Sbjct: 171 GLS-STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEV 229
Query: 171 ------------------------------------MFDEMPVRDAISWTALLNGFVKRG 194
MF +M + +SW ++ ++K
Sbjct: 230 CREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNA 289
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
EA+E + M+ G EPD V+I SVL AC + L +G IH Y+ ++ N+ + N
Sbjct: 290 MPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN 349
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
LID+Y++CGC++ AR VF+ M R +VSW ++I + +G +A+ F+ MQ G P
Sbjct: 350 ALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVP 409
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
D ++F L ACSHAGL+E+G F +M Y+++PR+EH C+VDL RAG++++A
Sbjct: 410 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKF 469
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
++ MPM+PNE V G+LL ACR + + L L P YVLL+N+YA G+W
Sbjct: 470 IQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRW 529
Query: 435 DGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC 494
+ IR MK +G++K PG S++E+ IH F+ GDRSH +S IY L++L +K
Sbjct: 530 EEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKEL 589
Query: 495 GYVPET 500
GYVP++
Sbjct: 590 GYVPDS 595
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 169/369 (45%), Gaps = 17/369 (4%)
Query: 93 FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTA-----LLDMYA--KFGRMDLATVVFDAMR 145
FP F + V KL LD+ N TA +LD Y K R + ++ + +R
Sbjct: 13 FPEFRKFQTRKVTSSVPKLELDQKNSPKETAFMLGQVLDTYPDLKTLRTVHSRIISEDLR 72
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
SS M Y D+ +A ++FDE+P R+ I ++ +V G++ E ++ F
Sbjct: 73 YNSSLGVKLM-RAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGT 131
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
M V+PD+ T VL AC+ G + IG IH K + V N L+ +Y +CG
Sbjct: 132 MCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGF 191
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+ AR V M +R +VSWNS++ G+A N +ALE M+ D + L A
Sbjct: 192 LSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA 251
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKP 382
S+ E+ + D+ K+ + S + + ++ +Y + +A+ + M +P
Sbjct: 252 VSNT-TTENVMYVKDMFFKMGKKS--LVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEP 308
Query: 383 NEVVLGSLLAACRTKGDIILAERLMKYL--VDLDPGVDSNYVLLANMYAAVGKWDGAGKI 440
+ V + S+L AC + L +++ Y+ L P + L+ +MYA G D A +
Sbjct: 309 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI-DMYAKCGCLDRARDV 367
Query: 441 RRTMKGRGI 449
MK R +
Sbjct: 368 FENMKSRDV 376
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 18/179 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ IS + SGR +A F++M G P+ I F+T L+ C+ G +
Sbjct: 377 VSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACS-------HAGLLEE 429
Query: 106 GLVC-KLGLDRNNVMVG----TALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDGY 159
G C KL D + ++D+ + G++ A M ++ + W A++
Sbjct: 430 GRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGAC 489
Query: 160 MRRGDIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+ + +A ++F P + + L N + K G +EE M+ G++ +
Sbjct: 490 RVHSNTDIGLLAADKLFQLAPEQSGY-YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKN 547
>gi|356518777|ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 737
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 271/461 (58%), Gaps = 17/461 (3%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W + IS + ++G EA F +M N +++ +L+SG + Q +
Sbjct: 76 TRSWNTLISFYSKTGFFDEAHNLFDKMPQR----NVVSYNSLISGNLQWLRQ-------V 124
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG+ +G++ N V++ AL+D Y K G +L+ VF M ++ +W +M+ Y R
Sbjct: 125 HGVAVIVGMEWN-VILNNALIDAYGKCGEPNLSFSVFCYMPERNVVSWTSMVVAYTRACR 183
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ A R+F +MPV++ +SWTALL GFV+ G +EA + F++M GV P T +SV++A
Sbjct: 184 LDEACRVFKDMPVKNTVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAPTFVSVIDA 243
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDN---VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
CA +G G +H +++ D N V VCN LID+Y++CG ++ A +F+ R +
Sbjct: 244 CAQEALIGRGKQVHGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKSAENLFEMAPMRDV 303
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
V+WN++I GFA NG E+L F M + +P+ V+F G L+ C+HAGL +GL+ D+
Sbjct: 304 VTWNTLITGFAQNGHGEESLAVFRRMIEAKVEPNHVTFLGVLSGCNHAGLDNEGLQLVDL 363
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP--MKPNEVVLGSLLAACRTKGD 399
M++ Y V P+ EHY ++DL R RL +A++++E +P +K + V G++L ACR G+
Sbjct: 364 MERQYGVKPKAEHYALLIDLLGRRNRLMEAMSLIEKVPDGIKNHIAVWGAVLGACRVHGN 423
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ LA + + L +L+P YV+LAN+YAA GKW GA +IR MK R ++K+P S IE
Sbjct: 424 LDLARKAAEKLFELEPENTGRYVMLANIYAASGKWGGAKRIRNVMKERCLEKEPACSRIE 483
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ + HEF+A D+ H + E I + L K GY P T
Sbjct: 484 LRNARHEFVAKDKFHPQVEEICEVNSKLVLHSKDAGYQPYT 524
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 148/302 (49%), Gaps = 22/302 (7%)
Query: 86 LLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR 145
L+S C ++ + L +HG + K L + + L+D Y+K G + A F +
Sbjct: 16 LISKC--ITARRVKLANAVHGHLIKTAL-FFDAFLANGLIDAYSKCGCEESAHKTFGDLP 72
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
K++ +WN +I Y + G + A +FD+MP R+ +S+ +L++G L+ R+
Sbjct: 73 NKTTRSWNTLISFYSKTGFFDEAHNLFDKMPQRNVVSYNSLISG---------NLQWLRQ 123
Query: 206 MQ----ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
+ I G+E + + ++++A G + + Y+ ++ NV +++ Y+
Sbjct: 124 VHGVAVIVGMEWNVILNNALIDAYGKCGEPNLSFSVFCYMPER----NVVSWTSMVVAYT 179
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
R ++ A +VF+ M + VSW +++ GF NG EA + F M +EG +P +F
Sbjct: 180 RACRLDEACRVFKDMPVKNTVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAPTFVS 239
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC--IVDLYSRAGRLEDALNVVENMP 379
+ AC+ LI G + + + + Y C ++D+Y++ G ++ A N+ E P
Sbjct: 240 VIDACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKSAENLFEMAP 299
Query: 380 MK 381
M+
Sbjct: 300 MR 301
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 39/260 (15%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V TV WT+ ++ R+G EA F +M G P+ TF++++ CA + G
Sbjct: 196 VKNTVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAPTFVSVIDACAQ--EALIGRG 253
Query: 102 AMIHGLVCKLGLDRN--NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+HG + + N NV V AL+DMYAK G M A +F+ ++ TWN +I G
Sbjct: 254 KQVHGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKSAENLFEMAPMRDVVTWNTLITG- 312
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
F + G+ EE+L FR M + VEP++VT +
Sbjct: 313 ------------------------------FAQNGHGEESLAVFRRMIEAKVEPNHVTFL 342
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH- 277
VL+ C + G GL + + +Q K + LIDL R + A + +++
Sbjct: 343 GVLSGCNHAGLDNEGLQLVDLMERQYGVKPKAEHYALLIDLLGRRNRLMEAMSLIEKVPD 402
Query: 278 --KRTLVSWNSIIVGFAVNG 295
K + W +++ V+G
Sbjct: 403 GIKNHIAVWGAVLGACRVHG 422
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 173/461 (37%), Positives = 259/461 (56%), Gaps = 34/461 (7%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S+ TV T+ IS + +G+ EA F + P +TF ++ A + L
Sbjct: 320 QSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAA--L 377
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
LG +HG + K LD VG+A+LDMYAK GR+DL
Sbjct: 378 NLGKELHGSIIKTKLDEK-CHVGSAILDMYAKCGRLDL---------------------- 414
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
A R+F+ + +DAI W +++ + G EA+ FR+M + G D V+I
Sbjct: 415 ---------ACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSI 465
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
L+ACAN+ L G IH ++K + ++ ++LID+Y++CG + F+R+VF RM +
Sbjct: 466 SGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQE 525
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R VSWNSII + +G + E L F+ M + G +PD V+F G ++AC HAG +++G+RY
Sbjct: 526 RNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRY 585
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
+ +M + Y + R+EHY C+ D++ RAGRL++A + +MP P+ V G+LL AC G
Sbjct: 586 YHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHG 645
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ LAE K+L DLDP YVLLAN+ A GKW K+R MK RG++K PG S I
Sbjct: 646 NVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWI 705
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
E+ + H F+A D SH + IYS+L+ L +LK GYVP+
Sbjct: 706 EVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQ 746
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 192/431 (44%), Gaps = 70/431 (16%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W I G+ A L + +M G +P+ TF ++ C S + +G ++
Sbjct: 23 TSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKS--VKMGKIV 80
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V +GL + +V VG++L+ +YA+ G
Sbjct: 81 HETVNLMGL-KEDVFVGSSLIKLYAE-------------------------------NGH 108
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A +FD +P +D++ W +LNG+VK G A++ F EM+ S ++P+ VT VL+
Sbjct: 109 LSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSV 168
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA+ L +G +H + + + V NTL+ +YS+C C++ AR++F + LVSW
Sbjct: 169 CASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSW 228
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG---------ALTACS-------- 327
N II G+ NG +GEA F M G KPD ++F +L C
Sbjct: 229 NGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIR 288
Query: 328 HAGLIEDGLR------YF-----DIMKKIYRVSPRIEHYGC--IVDLYSRAGRLEDALNV 374
HA +++ L+ YF ++ +KI S + C ++ Y G+ ++AL
Sbjct: 289 HAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEA 348
Query: 375 VENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLV--DLDPGVDSNYVLLANMYA 429
+ MKP V S+ A + L + L ++ LD +L +MYA
Sbjct: 349 FRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAIL-DMYA 407
Query: 430 AVGKWDGAGKI 440
G+ D A ++
Sbjct: 408 KCGRLDLACRV 418
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 191/403 (47%), Gaps = 47/403 (11%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W IS + ++G + EA F M G P+ ITF + L + S L IH
Sbjct: 226 VSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLS--LKHCKEIH 283
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G + + + +LD++ K +A+ID Y + D+
Sbjct: 284 GYIIRHAV----------VLDVFLK----------------------SALIDIYFKCRDV 311
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A ++ + D + T +++G+V G +EALE FR + ++P VT S+ A
Sbjct: 312 EMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAF 371
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A + L +G +H ++K + V + ++D+Y++CG ++ A +VF R+ ++ + WN
Sbjct: 372 AGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWN 431
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S+I + NG GEA+ F M EG + D VS +GAL+AC++ + G +M K
Sbjct: 432 SMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIK- 490
Query: 346 YRVSP-RIEHYG--CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
P R + Y ++D+Y++ G L + V + M + NEV S+++A GD L
Sbjct: 491 ---GPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQER-NEVSWNSIISAYGNHGD--L 544
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
E L + L G+ ++V + +A G AG++ ++
Sbjct: 545 KECLALFHEMLRNGIQPDHVTFLGIISACGH---AGQVDEGIR 584
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 158/360 (43%), Gaps = 48/360 (13%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W ++ + ++G A F M PN +TF +LS CA L LG +
Sbjct: 124 SVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCAS--EAMLDLGTQL 181
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG+ GL+ ++ + T LL MY+K + A +FD +WN +I GY
Sbjct: 182 HGIAVSCGLELDSPVANT-LLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGY----- 235
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
V+ G EA FR M +G++PD +T S L
Sbjct: 236 --------------------------VQNGLMGEAEHLFRGMISAGIKPDSITFASFLPC 269
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
+ +L IH Y+++ +V + + LID+Y +C +E A+++ + V
Sbjct: 270 VNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVC 329
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G+ +NG EALE F + +E KP V+F+ A + GL ++ K+
Sbjct: 330 TTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFA-------GLAALNLGKE 382
Query: 345 IY------RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
++ ++ + I+D+Y++ GRL+ A V + K + + S++ +C G
Sbjct: 383 LHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEK-DAICWNSMITSCSQNG 441
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 35/240 (14%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
++ T + W S I+ ++GR EA F +M + GT + ++ LS CA+ P+
Sbjct: 420 NRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPA-- 477
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L G IHGL+ K G R+++ ++L+DMYAK G ++ + VFD M+ ++ +WN++I
Sbjct: 478 LHYGKEIHGLMIK-GPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIIS 536
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
Y GD+ +E L F EM +G++PD+VT
Sbjct: 537 AYGNHGDL-------------------------------KECLALFHEMLRNGIQPDHVT 565
Query: 218 IISVLNACANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+ +++AC + G + G+ + H + ++ + D++ R G ++ A + M
Sbjct: 566 FLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSM 625
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 95/183 (51%)
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y+R G ++ A +F + + +W ++ GF G F AL + +M +GV PD T
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
V+ AC + ++ +G +H V K++V V ++LI LY+ G + A+ +F + +
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ V WN ++ G+ NG G A++ F M+ KP+ V+F L+ C+ +++ G +
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQL 181
Query: 339 FDI 341
I
Sbjct: 182 HGI 184
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 14/147 (9%)
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
+Y R G ++ A+ +F + +WN +I GF + G AL ++ M G PD +
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYR------VSPRIEHYGCIVDLYSRAGRLEDAL 372
F + AC GL+ + K ++ + + ++ LY+ G L DA
Sbjct: 61 FPYVVKACC-------GLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQ 113
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGD 399
+ +N+P K + V+ +L GD
Sbjct: 114 YLFDNIPQK-DSVLWNVMLNGYVKNGD 139
>gi|414873430|tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea mays]
Length = 536
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/451 (37%), Positives = 259/451 (57%), Gaps = 13/451 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC---ADFPSQCLFL-- 100
V T+ H SG+ A+A F M G P+++ L+ C A P+ +
Sbjct: 79 VSRTAMARAHAASGQAAQALAVFRDMIADGVLPDNVALAVALAACHTTASLPAAGMAAAR 138
Query: 101 --GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G M+H ++ G+ +V V T L+ +Y ++G + L+ +FDAM V+S+ +WNAM+
Sbjct: 139 RPGKMVHAIIVTSGI-VPDVFVSTELIRVYGEYGELALSRRLFDAMPVRSTVSWNAMVHQ 197
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM---QISGVEPDY 215
Y+R ++ A +F MP RD +SW ++ G+ G F EALE R+M V P+
Sbjct: 198 YIRHSNVGDAYELFLAMPRRDVVSWNTMIAGYSLVGRFMEALELSRQMISPSSCPVYPNG 257
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
T+ +VL ACA G L G+W+H +V + D+ + +LID+Y +CG IE A QVF++
Sbjct: 258 PTMSTVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYVKCGSIEKALQVFEK 317
Query: 276 M-HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
R L SW ++I G A++G +AL+ F MQ G PD V+ G L AC+H GL+++
Sbjct: 318 APEARDLYSWTTMICGLAMHGRAADALKMFGMMQDNGIHPDDVTLVGVLNACAHCGLVDE 377
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
GLR+F ++K Y ++P+IEHYGC++DL R GRL++A N++ M MKPN V+ G+ L AC
Sbjct: 378 GLRHFYSLEK-YAITPKIEHYGCVIDLLGRVGRLQEAYNIIRTMRMKPNAVIWGAFLNAC 436
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPG 454
+ ++ L E L LDPG V+L+++YA + W+ + RR M I+K PG
Sbjct: 437 KVHSNVELGEIAAAELTRLDPGDPWAKVMLSSLYAKLQDWNSLARERREMNNLQIKKTPG 496
Query: 455 LSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
SSIE+ +HEF+AG H + I ++LE
Sbjct: 497 CSSIELDGEVHEFVAGGFQHPQHGEICTVLE 527
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 125/322 (38%), Gaps = 75/322 (23%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
A IHGL+ K GL + TALL YA GR
Sbjct: 30 AAEIHGLLFKEGLLHAGAHLPTALLSAYAALGR--------------------------- 62
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
A +FDEMP +S TA+ G +AL FR+M GV PD V +
Sbjct: 63 ----PRHARDLFDEMPDPGLVSRTAMARAHAASGQAAQALAVFRDMIADGVLPDNVALAV 118
Query: 221 VLNACANVGTLGI---------GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
L AC +L G +H ++ +V V LI +Y G + +R+
Sbjct: 119 ALAACHTTASLPAAGMAAARRPGKMVHAIIVTSGIVPDVFVSTELIRVYGEYGELALSRR 178
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE----------GFK-------- 313
+F M R+ VSWN+++ + + VG+A E F +M + G+
Sbjct: 179 LFDAMPVRSTVSWNAMVHQYIRHSNVGDAYELFLAMPRRDVVSWNTMIAGYSLVGRFMEA 238
Query: 314 ----------------PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC 357
P+G + + L AC+ AG +E G+ + + R++
Sbjct: 239 LELSRQMISPSSCPVYPNGPTMSTVLAACAGAGCLETGIWVHAFVDR-NRMNDDGSLDRS 297
Query: 358 IVDLYSRAGRLEDALNVVENMP 379
++D+Y + G +E AL V E P
Sbjct: 298 LIDMYVKCGSIEKALQVFEKAP 319
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/486 (34%), Positives = 258/486 (53%), Gaps = 40/486 (8%)
Query: 52 ISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKL 111
I + +G E F M P+H TF +L C+ S + +G IHG K+
Sbjct: 112 IRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACS--CSGTIVIGRKIHGSATKV 169
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR- 170
GL + + VG L+ MY K G + A +V D M + +WN+++ GY + + A+
Sbjct: 170 GLS-STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Query: 171 ------------------------------------MFDEMPVRDAISWTALLNGFVKRG 194
MF +M + +SW ++ ++K
Sbjct: 229 CREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNA 288
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
EA+E + M+ G EPD V+I SVL AC + L +G IH Y+ ++ N+ + N
Sbjct: 289 MPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN 348
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
LID+Y++CGC+E AR VF+ M R +VSW ++I + +G +A+ F+ +Q G P
Sbjct: 349 ALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVP 408
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
D ++F L ACSHAGL+E+G F +M Y+++PR+EH C+VDL RAG++++A
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRF 468
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
+++M M+PNE V G+LL ACR D + L L P YVLL+N+YA G+W
Sbjct: 469 IQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRW 528
Query: 435 DGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC 494
+ IR MK +G++K PG S++E+ IH F+ GDRSH +S+ IY L++L +K
Sbjct: 529 EEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKEL 588
Query: 495 GYVPET 500
GYVP++
Sbjct: 589 GYVPDS 594
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 169/368 (45%), Gaps = 16/368 (4%)
Query: 93 FPSQCLFLGAMIHGLVCKLGLDRNN----VMVGTALLDMYAKFG--RMDLATVVFDAMRV 146
FP F + + KL LD+ + V + +LD Y R + ++ + +R
Sbjct: 13 FPKFRKFQSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRC 72
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
SS M Y D+ SA ++FDE+P R+ I ++ +V G++ E ++ F M
Sbjct: 73 NSSLGVKLM-RAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM 131
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
V PD+ T VL AC+ GT+ IG IH K + V N L+ +Y +CG +
Sbjct: 132 CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFL 191
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
AR V M +R +VSWNS++VG+A N +ALE M+ D + L A
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV 251
Query: 327 SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPN 383
S+ E+ + D+ K+ + S + + ++ +Y + +A+ + M +P+
Sbjct: 252 SNT-TTENVMYVKDMFFKMGKKS--LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPD 308
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYL--VDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
V + S+L AC + L +++ Y+ L P + L+ +MYA G + A +
Sbjct: 309 AVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI-DMYAKCGCLEKARDVF 367
Query: 442 RTMKGRGI 449
MK R +
Sbjct: 368 ENMKSRDV 375
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 144/361 (39%), Gaps = 75/361 (20%)
Query: 24 NLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITF 83
N TT + ++ K V W I + ++ EA ++RM G P+ ++
Sbjct: 253 NTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312
Query: 84 ITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDA 143
++L C D + L LG IHG + + L N+++ AL+DMYAK G ++ A VF+
Sbjct: 313 TSVLPACGD--TSALSLGKKIHGYIERKKL-IPNLLLENALIDMYAKCGCLEKARDVFEN 369
Query: 144 MRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF 203
M+ + +W AMI Y GF RG +A+ F
Sbjct: 370 MKSRDVVSWTAMISAY-----------------------------GFSGRGC--DAVALF 398
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
++Q SG+ PD + ++ L AC++ G L
Sbjct: 399 SKLQDSGLVPDSIAFVTTLAACSHAGLL-------------------------------- 426
Query: 264 GCIEFARQVFQRM--HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
E R F+ M H + + + G G+ E + +Q +P+ +
Sbjct: 427 ---EEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGA 483
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE-HYGCIVDLYSRAGRLEDALNVVENMPM 380
L AC + GL D K+++++P +Y + ++Y++AGR E+ N+ M
Sbjct: 484 LLGACRVHSDTDIGLLAAD---KLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKS 540
Query: 381 K 381
K
Sbjct: 541 K 541
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 18/179 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ IS + SGR +A F+++ G P+ I F+T L+ C+ G +
Sbjct: 376 VSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACS-------HAGLLEE 428
Query: 106 GLVC-KLGLDRNNVMVG----TALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDGY 159
G C KL D + ++D+ + G++ A M ++ + W A++
Sbjct: 429 GRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGAC 488
Query: 160 MRRGDIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
D + +A ++F P + + L N + K G +EE M+ G++ +
Sbjct: 489 RVHSDTDIGLLAADKLFQLAPEQSGY-YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKN 546
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 171/462 (37%), Positives = 264/462 (57%), Gaps = 35/462 (7%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T V W + I+ + + EA F M P+ T +++LS CA S + L
Sbjct: 176 TERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQ--SGSIEL 233
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G IH LV D + FG L V NA I Y
Sbjct: 234 GREIHTLV-----------------DDHHGFGS-SLKIV-------------NAFIGLYS 262
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ GD+E A +F+ + +D +SW L+ G+ ++EAL F+EM SG P+ VT++S
Sbjct: 263 KCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLS 322
Query: 221 VLNACANVGTLGIGLWIHRYVLK--QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
VL ACA++G + IG WIH Y+ K + + + +LID+Y++CG IE A QVF M
Sbjct: 323 VLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMH 382
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
++L SWN++I GFA++G A + F+ M+K G +PD ++ G L+ACSH+GL++ G
Sbjct: 383 KSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHI 442
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F + + Y ++P++EHYGC++DL AG ++A ++ MPM+P+ V+ SLL AC+ G
Sbjct: 443 FKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHG 502
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ LAE + L++++P +YVLL+N+YA G+W+ +IR + G+G++K PG SSI
Sbjct: 503 NLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSI 562
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
EI S +HEF+ GD+ H +S IY MLE + L+ G+VP+T
Sbjct: 563 EIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDT 604
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 208/419 (49%), Gaps = 49/419 (11%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLG--LDRNNVMVGTALL 125
+ RM G PN TF LL CA S+ G IH V KLG LDR T+L+
Sbjct: 71 YVRMVSXGHVPNAYTFPFLLKSCA--KSKTFEEGRQIHAQVMKLGCELDR---YAHTSLI 125
Query: 126 DMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTA 185
MYA+ GR++ A VFD + + A+I GY RGD+ SA ++FD + RD +SW A
Sbjct: 126 SMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNA 185
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
++ G+V+ +EEALE F+EM + V PD T++SVL+ACA G++ +G IH V
Sbjct: 186 MITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHH 245
Query: 246 -FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
F ++K+ N I LYS+CG +E A +F+ + + +VSWN++I G+ EAL F
Sbjct: 246 GFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLF 305
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KKIYRVSPRIEHYGCIVDLY 362
M + G P+ V+ L AC+H G I+ G R+ + K++ V+ ++D+Y
Sbjct: 306 QEMLRSGESPNDVTMLSVLPACAHLGAIDIG-RWIHVYIDKRLKGVTNGSALRTSLIDMY 364
Query: 363 SRAGRLEDALNVVENMPMK----------------------------------PNEVVLG 388
++ G +E A V +M K P+++ L
Sbjct: 365 AKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLV 424
Query: 389 SLLAACRTKGDIILAERLMKYLV---DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
LL+AC G + L + K + ++ P ++ +Y + ++ G + A +I M
Sbjct: 425 GLLSACSHSGLLDLGRHIFKSVTQDYNITPKLE-HYGCMIDLLGHAGLFKEAEEIIHMM 482
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 160/389 (41%), Gaps = 49/389 (12%)
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYA---KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
H + K GL N + + LL++ F + A VF+ + + WN M+ G
Sbjct: 2 HAQMVKTGLHNTNYAL-SKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60
Query: 162 RGDIESAVRMFDEM----PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
D+ S + M+ M V +A ++ LL K FEE + ++ G E D
Sbjct: 61 SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
S+++ A G L R V + +V C LI Y+ G + AR+VF +
Sbjct: 121 HTSLISMYARNGRLEDA----RKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXIT 176
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+R +VSWN++I G+ N EALE F M + +PD + L+AC+ +G IE G
Sbjct: 177 ERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGRE 236
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK---------------- 381
++ + ++ + LYS+ G +E A + E + K
Sbjct: 237 IHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMN 296
Query: 382 ------------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
PN+V + S+L AC G I + + Y+ GV + L
Sbjct: 297 LYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSAL 356
Query: 424 ---LANMYAAVGKWDGAGKIRRTMKGRGI 449
L +MYA G + A ++ +M + +
Sbjct: 357 RTSLIDMYAKCGDIEAAHQVFNSMMHKSL 385
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 252/456 (55%), Gaps = 34/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ I + SG EA F + G P+ T + +L C+ L G I
Sbjct: 168 VVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGD--LASGRWI 225
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
G + + G NV V T+L+DMYAK G
Sbjct: 226 DGYMRESG-SVGNVFVATSLVDMYAKC-------------------------------GS 253
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A R+FD M +D + W+AL+ G+ G +EAL+ F EMQ V PD ++ V +A
Sbjct: 254 MEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSA 313
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+ +G L +G W + +F N + LID Y++CG + A++VF+ M ++ V +
Sbjct: 314 CSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVF 373
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G A+ G VG A F M K G +PDG +F G L C+HAGL++DG RYF M
Sbjct: 374 NAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSS 433
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
++ V+P IEHYGC+VDL +RAG L +A +++ +MPM+ N +V G+LL CR D LAE
Sbjct: 434 VFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAE 493
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++K L++L+P +YVLL+N+Y+A +WD A KIR ++ +G+QK PG S +E+ +
Sbjct: 494 HVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVV 553
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF+ GD SH S IY LE L DL+ GY P T
Sbjct: 554 HEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTT 589
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 177/358 (49%), Gaps = 35/358 (9%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
+A + M HG P++ TF +L C P +G +H LV K G D + V V T
Sbjct: 84 DAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHY-FHVGLSLHSLVIKTGFDWD-VFVKT 141
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
L+ +Y+K G + A ++FDE+P ++ +S
Sbjct: 142 GLVCLYSK-------------------------------NGFLTDARKVFDEIPEKNVVS 170
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
WTA++ G+++ G F EAL FR + G+ PD T++ +L AC+ VG L G WI Y+
Sbjct: 171 WTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMR 230
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
+ NV V +L+D+Y++CG +E AR+VF M ++ +V W+++I G+A NG EAL+
Sbjct: 231 ESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALD 290
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F MQ+E +PD + G +ACS G +E G +M +S + ++D Y
Sbjct: 291 VFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTA-LIDFY 349
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
++ G + A V + M K + VV ++++ G + A + +V + D N
Sbjct: 350 AKCGSVAQAKEVFKGMRRK-DCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGN 406
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 2/236 (0%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+ ++ N ++ + + A +F + P + + L+ G V F +A+ + M
Sbjct: 33 QDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASM 92
Query: 207 QISGVEPDYVTIISVLNACANV-GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
+ G PD T VL AC + +GL +H V+K F +V V L+ LYS+ G
Sbjct: 93 RQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGF 152
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+ AR+VF + ++ +VSW +II G+ +G GEAL F + + G +PD + L A
Sbjct: 153 LTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYA 212
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
CS G + G R+ D + + +VD+Y++ G +E+A V + M K
Sbjct: 213 CSRVGDLASG-RWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEK 267
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 33/216 (15%)
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
H +L+ + + N L+ ++A VF + + +N++I G N
Sbjct: 23 HCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAF 82
Query: 298 GEALEYFNSMQKEGFKPDGVSFTGALTACS------HAGL------IEDGLRYFDIMKKI 345
+A+ + SM++ GF PD +F L AC+ H GL I+ G + D+ K
Sbjct: 83 RDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDW-DVFVKT 141
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+V LYS+ G L DA V + +P K N V +++ G A
Sbjct: 142 -----------GLVCLYSKNGFLTDARKVFDEIPEK-NVVSWTAIICGYIESGCFGEALG 189
Query: 406 LMKYLVDLDPGVDSNYVLLANMYA-------AVGKW 434
L + L+++ DS + L+ +YA A G+W
Sbjct: 190 LFRGLLEMGLRPDS-FTLVRILYACSRVGDLASGRW 224
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 165/460 (35%), Positives = 264/460 (57%), Gaps = 35/460 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
V+ + WT+ I+ + +SG A+E F M PNH TF ++L CA+ ++L
Sbjct: 211 VHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSD--IWL 268
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G ++ LV K+ L N VG +L+ MY+
Sbjct: 269 GEQVYALVVKMRLASINC-VGNSLISMYS------------------------------- 296
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R G++E+A + FD + ++ +S+ ++N + K EEA E F E++ +G + T S
Sbjct: 297 RCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFAS 356
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+L+ +++G +G G IH +LK FK N+ +CN LI +YSRCG IE A QVF M
Sbjct: 357 LLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGN 416
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
++SW S+I GFA +GF ALE F+ M + G P+ V++ L+ACSH GLI +GL++F
Sbjct: 417 VISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFK 476
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
MK + + PR+EHY C+VDL R+G LE+A+ +V +MP K + +VL + L ACR G++
Sbjct: 477 SMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNM 536
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L + + +++ DP + Y+LL+N++A+ G+W+ +IR+ MK R + K+ G S IE+
Sbjct: 537 DLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEV 596
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ +H+F GD SH +++ IY L+ L+ +K GY+P T
Sbjct: 597 ENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPST 636
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 169/334 (50%), Gaps = 45/334 (13%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ IS + + + EA F M G PN F + C++ + + LG +I
Sbjct: 8 VSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSN--KENISLGKIIF 65
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G + K G ++V VG AL+DM+ K GD+
Sbjct: 66 GFLLKTGYFESDVCVGCALIDMFVK------------------------------GNGDL 95
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
ESA ++FD MP R+ ++WT ++ F + G+ +A++ F +M +SG PD T+ V++AC
Sbjct: 96 ESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSAC 155
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC---GCIEFARQVFQRMHKRTLV 282
A +G L +G H V+K +V V +L+D+Y++C G ++ AR+VF RM ++
Sbjct: 156 AEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVM 215
Query: 283 SWNSIIVGFAVNGFVG-EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
SW +II G+ +G EA+E F M + KP+ +F+ L AC++ I G + + +
Sbjct: 216 SWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYAL 275
Query: 342 MKKIYRVSPRIEHYGCI----VDLYSRAGRLEDA 371
+ K+ R+ C+ + +YSR G +E+A
Sbjct: 276 VVKM-----RLASINCVGNSLISMYSRCGNMENA 304
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 139/305 (45%), Gaps = 46/305 (15%)
Query: 178 RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWI 237
RD +SW+AL++ + EA+ F +M G P+ V AC+N + +G I
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 238 HRYVLKQD-FKDNVKVCNTLIDLYSRC-GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
++LK F+ +V V LID++ + G +E A +VF RM R +V+W +I F G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKKIYRVSPRIEH 354
F +A++ F M G+ PD + +G ++AC+ GL+ G ++ +MK + +
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCV-- 182
Query: 355 YGC-IVDLYSRA---GRLEDALNVVENMP------------------------------- 379
GC +VD+Y++ G ++DA V + MP
Sbjct: 183 -GCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEM 241
Query: 380 ----MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD-PGVDSNYVLLANMYAAVGKW 434
+KPN S+L AC DI L E++ +V + ++ L +MY+ G
Sbjct: 242 VQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNM 301
Query: 435 DGAGK 439
+ A K
Sbjct: 302 ENARK 306
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 97/243 (39%), Gaps = 52/243 (21%)
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+KR LVSW+++I +A N EA+ F M + GF P+ FTG ACS+ I G
Sbjct: 3 NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62
Query: 337 RYFDIMKKIYRVSPRIEHYGC-IVDLYSRA-GRLEDALNVVENMPMK------------- 381
F + K + GC ++D++ + G LE A V + MP +
Sbjct: 63 IIFGFLLKTGYFESDV-CVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQ 121
Query: 382 ---------------------PNEVVLGSLLAACRTKGDIILAER----LMKYLVDLDPG 416
P+ L +++AC G + L + +MK +DLD
Sbjct: 122 QLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVC 181
Query: 417 VDSNYVLLANMYA---AVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRS 473
V + L +MYA A G D A K+ M + + + + SG DR
Sbjct: 182 VGCS---LVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSG-----GCDRE 233
Query: 474 HIE 476
IE
Sbjct: 234 AIE 236
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 270/455 (59%), Gaps = 7/455 (1%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTL---HGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
S I HC+S + E + +F L +G P++ T L+ C + G +H
Sbjct: 83 NSMIRAHCKSP-VPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMR--ETGLQVH 139
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G+ + G D N+ V T L+ +YA+ G +D VF+++ AM+ R GD+
Sbjct: 140 GMTIRRGFD-NDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACARCGDV 198
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A ++F+ MP +D I+W A+++G+ + G EAL F MQ+ GV+ + V++ISVL+AC
Sbjct: 199 AFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLSAC 258
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+G L G W H Y+ + K V++ TL+DLY++CG ++ A +VF M ++ + +W+
Sbjct: 259 TQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWS 318
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S + G A+NGF + L+ F+ M+++G P+ V+F L CS G +++G ++FD M+
Sbjct: 319 SALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNE 378
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ + P+++HYGC+VDLY+RAGRLEDA+++++ MPMK + V SLL A R ++ L
Sbjct: 379 FGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNLELGVL 438
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
K +++L+ YVLL+N+YA WD +R++MK +G++K+PG S +E+ +H
Sbjct: 439 ASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVH 498
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
EF GD+SH + I ++ + +S L+L GY +T
Sbjct: 499 EFFVGDKSHPKYNEIDAVWKDISRRLRLAGYKADT 533
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 232/418 (55%), Gaps = 34/418 (8%)
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
G PN +TF++++S C ++ G IHGLV K G+ V V AL+++Y K
Sbjct: 632 GFRPNEVTFLSMISACVHGGNK--EEGVCIHGLVMKSGV-LEEVKVVNALMNLYGK---- 684
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
GD+ S+ ++F+++ V++ +SW ++ ++ G
Sbjct: 685 ---------------------------TGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNG 717
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
EE L F + G++PD T ++VL C ++G + + IH ++ F N +
Sbjct: 718 LAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITT 777
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
L+DLY++ G +E + VF + ++W +++ +A +G+ +A+++F M G P
Sbjct: 778 ALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSP 837
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
D V+FT L ACSH+GL+E+G YF+ M K YR+ PR++HY C+VDL R+G L+DA +
Sbjct: 838 DHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGL 897
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
++ MPM+P+ V G+LL ACR D L + K L +L+P NY++L+N+Y+A G W
Sbjct: 898 IKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLW 957
Query: 435 DGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
A +IR MK +G+ + G S IE G+ IH+F+ GD SH ESE I L+ + +K
Sbjct: 958 KDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMK 1015
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 35/237 (14%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
+V V W + I H ++G E F G P+ TF+ +L C D L
Sbjct: 699 SVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQ 758
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G IHGL+ G + N + TALLD+YAK GR++ ++ VF + S W AM+ Y
Sbjct: 759 G--IHGLIMFCGFNANTC-ITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAY- 814
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
GY +A++ F M G+ PD+VT
Sbjct: 815 ------------------------------ATHGYGRDAIKHFELMVHYGLSPDHVTFTH 844
Query: 221 VLNACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+LNAC++ G + G + + K+ + + + ++DL R G ++ A + + M
Sbjct: 845 LLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEM 901
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 14/179 (7%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD---FPSQC 97
T ++ WT+ ++ + G +A F M +G +P+H+TF LL+ C+
Sbjct: 800 TSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGR 859
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMI 156
+ M + LD + MV D+ + G + A + M ++ SS W A++
Sbjct: 860 YYFETMSKRYRIEPRLDHYSCMV-----DLMGRSGLLQDAYGLIKEMPMEPSSGVWGALL 914
Query: 157 DGYMRRGDIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV 211
D + +A R+F+ P RD ++ L N + G +++A M+ G+
Sbjct: 915 GACRVYKDTQLGTKAAKRLFELEP-RDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGL 972
>gi|297811673|ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319557|gb|EFH49979.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 269/462 (58%), Gaps = 13/462 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ +S R G + + F M +H++ + L CA L G H
Sbjct: 77 VDWTTLLSSFSRFGLLVNSMKLFVEMRRKRVEIDHVSLVCLFGVCAKLED--LRFGEQGH 134
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G+ K+G +V V AL+DMY K G + +F A+ KS +W ++D ++ +
Sbjct: 135 GVAVKMGF-LTSVKVCNALMDMYGKCGFVSEVKRIFQALEEKSVVSWTVVLDTLVKWEGL 193
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNA 224
+ +FDEMP R+ ++WT ++ G++ G+ E LE EM G ++VT+ S+L+A
Sbjct: 194 KRGREVFDEMPERNVVAWTLMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSA 253
Query: 225 CANVGTLGIGLWIHRYVLK-------QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
CA G L IG W+H Y LK ++ D V V L+D+Y++CG I+ + +VF+ M
Sbjct: 254 CAQSGNLVIGRWVHVYALKKAMMMGEEETYDGVMVGTALVDMYAKCGNIDSSIKVFRLMR 313
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
KR +V+WN++ G A++G ++ F M +E KPD ++FT L+ACSH G++++G R
Sbjct: 314 KRNVVTWNALFSGLAMHGKGRMVIDMFPEMVRE-VKPDDLTFTALLSACSHLGMVDEGWR 372
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
F ++ Y + P+++HY C+VD+ RAGR+E+A ++ MP+ PNEVVLGSLL +C
Sbjct: 373 CFHSLQ-FYGLEPKVDHYACMVDILGRAGRIEEAEILMREMPVPPNEVVLGSLLGSCSVH 431
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G + +AER+ + L+ + PG +L++NMY A G+ D A +R +++ RGI+K PGLSS
Sbjct: 432 GKLEIAERIKRELIQMSPGHTEYQILMSNMYVAEGRSDIADGLRGSLRNRGIRKIPGLSS 491
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
I + +H F +GDRSH ++ +Y L + ++ GYVP+
Sbjct: 492 IYVNDSVHRFSSGDRSHPRTKEVYLKLNEVIERIRSAGYVPD 533
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 163/459 (35%), Positives = 262/459 (57%), Gaps = 7/459 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ WTS S + G + EA F +M L+G PN +T ++L C D L G +H
Sbjct: 145 ISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKD--LKSGREVH 202
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V + G+ NV V +AL++MYA + A +VFD+M + + +WN +I Y +
Sbjct: 203 GFVVRNGMG-GNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKEC 261
Query: 166 ESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
E + +F M + SW A++ G ++ G E+ALE MQ SG +P+ +TI SV
Sbjct: 262 EKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSV 321
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L AC N+ +L G IH Y+ + F ++ L+ +Y++CG +E +R+VF M KR
Sbjct: 322 LPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDT 381
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSWN++I+ +++G EAL F M G +P+ V+FTG L+ CSH+ L+++GL FD
Sbjct: 382 VSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDS 441
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M + + V P +H+ C+VD+ SRAGRLE+A ++ MP++P G+LL CR ++
Sbjct: 442 MSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVE 501
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
L L +++ NYVLL+N+ + W A + R+ M+ RG+ K PG S I++
Sbjct: 502 LGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVR 561
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ +H F+ GD+S+ +S+ IY L+ + +++ GY+P T
Sbjct: 562 NRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNT 600
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 33/242 (13%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
NA+ID Y + E A +F+ MP RD ISWT++ + +V G EAL FR+M ++G
Sbjct: 117 NALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGER 176
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P+ VT+ S+L AC ++ L G +H +V++ NV V + L+++Y+ C I A+ V
Sbjct: 177 PNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLV 236
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F M +R VSWN +I + +N + L F M EG + S+ + C G
Sbjct: 237 FDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRT 296
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
E L + L+ ++N KPN++ + S+L
Sbjct: 297 EKAL---------------------------------EVLSRMQNSGFKPNQITITSVLP 323
Query: 393 AC 394
AC
Sbjct: 324 AC 325
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 97/181 (53%), Gaps = 1/181 (0%)
Query: 156 IDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPD 214
I Y GD++ A +FD++P D +WT L++ K G EA++ + + + VEPD
Sbjct: 18 IKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPD 77
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+ ++SV ACA++ + +H ++ F +V + N LID+Y +C C E AR VF+
Sbjct: 78 KLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFE 137
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
M R ++SW S+ + G + EAL F M G +P+ V+ + L AC+ ++
Sbjct: 138 GMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKS 197
Query: 335 G 335
G
Sbjct: 198 G 198
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 84/213 (39%), Gaps = 41/213 (19%)
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ-KEGFKP 314
I +YS G ++ AR +F ++ + L +W +I +G EA++Y+N + K +P
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 315 DGVSFTGALTACSHAGLI-------EDGLRYFDIMKKIYRVSPRIEHYG----------- 356
D + AC+ + ED +R F + + I+ YG
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIR-FGFCSDVLLGNALIDMYGKCRCSEGARLV 135
Query: 357 -------------CIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTKGDI 400
+ Y G L +AL M + +PN V + S+L AC D+
Sbjct: 136 FEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDL 195
Query: 401 ILAERLMKYLVDLDPGVDSNYVL---LANMYAA 430
+ ++V G+ N + L NMYA+
Sbjct: 196 KSGREVHGFVV--RNGMGGNVFVSSALVNMYAS 226
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 14/182 (7%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD---FP 94
S T TV W + I G EA L F M G PN +TF +LSGC+
Sbjct: 374 SMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVD 433
Query: 95 SQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWN 153
L +M + D ++ MV D+ ++ GR++ A M ++ ++ W
Sbjct: 434 EGLLIFDSMSRDHSVEPDADHHSCMV-----DVLSRAGRLEEAYEFIKKMPIEPTAGAWG 488
Query: 154 AMIDGYMRRGDIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
A++ G ++E +A R+F E+ + ++ L N V + EA E + M+
Sbjct: 489 ALLGGCRVYKNVELGRIAANRLF-EIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDR 547
Query: 210 GV 211
GV
Sbjct: 548 GV 549
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 171/456 (37%), Positives = 253/456 (55%), Gaps = 35/456 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W + I+ + R EA + +M G P +TF+ LLS CA+ S G MIH
Sbjct: 397 ISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACAN--SSAYADGKMIH 454
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + G+ N + NA+++ Y R G +
Sbjct: 455 EDILRSGIKSNGHLA--------------------------------NALMNMYRRCGSL 482
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +F+ RD ISW +++ G + G +E A + F+EMQ +EPD +T SVL+ C
Sbjct: 483 MEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGC 542
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
N L +G IH + + + +V + N LI++Y RCG ++ AR VF + R ++SW
Sbjct: 543 KNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWT 602
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKP-DGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G A G +A+E F MQ EGF+P DG +FT L+AC+HAGL+ +G + F M+
Sbjct: 603 AMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMES 662
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y V P IEHYGC+V L RA R ++A ++ MP P+ V +LL ACR G+I LAE
Sbjct: 663 EYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAE 722
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ L+ + Y+LL+N+YAA G+WD KIRR M+GRGI+K+PG S IE+ + I
Sbjct: 723 HAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNII 782
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF+A DRSH E+ IY+ L+ LS +++ GY P+T
Sbjct: 783 HEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDT 818
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 179/370 (48%), Gaps = 54/370 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + I+ + G EA ++ RM G N T++++L+ C+ S+ L G +IH
Sbjct: 296 VVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACS--TSKALEAGKLIH 353
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + G ++V +G AL+ MYA R GD+
Sbjct: 354 SHISEDG-HSSDVQIGNALISMYA-------------------------------RCGDL 381
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +F MP RD ISW A++ G+ +R EA+ +++MQ GV+P VT + +L+AC
Sbjct: 382 PKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN G IH +L+ K N + N L+++Y RCG + A+ VF+ R ++SWN
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWN 501
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S+I G A +G A + F MQ E +PD ++F L+ C + +E G K+I
Sbjct: 502 SMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELG-------KQI 554
Query: 346 YRVSPRIEHYG---------CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+ RI G ++++Y R G L+DA NV ++ + + + +++ C
Sbjct: 555 H---GRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGCAD 610
Query: 397 KGDIILAERL 406
+G+ + A L
Sbjct: 611 QGEDMKAIEL 620
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 202/440 (45%), Gaps = 72/440 (16%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + + + + + E F +M+ G +P+ +T+I LL PS L G IH
Sbjct: 195 VSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTT-PSM-LDEGKRIH 252
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L + GL+ +++ VGTAL+ M +R GD+
Sbjct: 253 KLTVEEGLN-SDIRVGTALVTMC-------------------------------VRCGDV 280
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+SA + F + RD + + AL+ + G+ EA E + M+ GV + T +S+LNAC
Sbjct: 281 DSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNAC 340
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ L G IH ++ + +V++ N LI +Y+RCG + AR++F M KR L+SWN
Sbjct: 341 STSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWN 400
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKK 344
+II G+A GEA+ + MQ EG KP V+F L+AC+++ DG + + DI++
Sbjct: 401 AIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS 460
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE---------------------------- 376
+ + + + ++++Y R G L +A NV E
Sbjct: 461 GIKSNGHLAN--ALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYK 518
Query: 377 ------NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-VLLANMYA 429
N ++P+ + S+L+ C+ + L +++ + + +D N L NMY
Sbjct: 519 LFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYI 578
Query: 430 AVGKWDGAGKIRRTMKGRGI 449
G A + +++ R +
Sbjct: 579 RCGSLQDARNVFHSLQHRDV 598
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 182/362 (50%), Gaps = 17/362 (4%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F N +I+ Y++ + A ++F EMP RD ISW +L++ + ++G+ ++A + F EMQ +
Sbjct: 63 FLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNA 122
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G P+ +T IS+L AC + L G IH ++K ++ + +V N+L+ +Y +CG + A
Sbjct: 123 GFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRA 182
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
RQVF + R +VS+N+++ +A +V E L F M EG PD V++ L A +
Sbjct: 183 RQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTP 242
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
++++G R + + ++ I +V + R G ++ A + + + + VV +
Sbjct: 243 SMLDEGKRIHKLTVE-EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADR-DVVVYNA 300
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSN---YVLLANMYAAVGKWDGAGKIRRTMKG 446
L+AA G + E +Y GV N Y+ + N + K AGK+ +
Sbjct: 301 LIAALAQHGHNV--EAFEQYYRMRSDGVALNRTTYLSILNA-CSTSKALEAGKLIHSH-- 355
Query: 447 RGIQKKPGLSSIEIGSGIHEFMA--GDRSHIESEHIYSM--LELLSFDLKLCGYVPETVA 502
I + S ++IG+ + A GD E Y+M +L+S++ + GY
Sbjct: 356 --ISEDGHSSDVQIGNALISMYARCGDLPKAR-ELFYTMPKRDLISWNAIIAGYARREDR 412
Query: 503 GE 504
GE
Sbjct: 413 GE 414
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 167/366 (45%), Gaps = 38/366 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W S IS + + G +A F M G PN IT+I++L+ C P++ L G IH
Sbjct: 94 ISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS-PAE-LENGKKIH 151
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K G R + V +LL MY K G + A VF + + ++N M+ Y ++
Sbjct: 152 SQIIKAGYQR-DPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQK--- 207
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
Y +E L F +M G+ PD VT I++L+A
Sbjct: 208 ----------------------------AYVKECLGLFGQMSSEGISPDKVTYINLLDAF 239
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
L G IH+ +++ +++V L+ + RCG ++ A+Q F+ + R +V +N
Sbjct: 240 TTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYN 299
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKK 344
++I A +G EA E + M+ +G + ++ L ACS + +E G L + I +
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED 359
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ S ++ ++ +Y+R G L A + MP K + + +++A + D A
Sbjct: 360 GH--SSDVQIGNALISMYARCGDLPKARELFYTMP-KRDLISWNAIIAGYARREDRGEAM 416
Query: 405 RLMKYL 410
RL K +
Sbjct: 417 RLYKQM 422
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 5/181 (2%)
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
Q E D T +++L C L IH +++ ++ + N LI++Y +C +
Sbjct: 19 QPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSV 78
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
A QVF+ M +R ++SWNS+I +A GF +A + F MQ GF P+ +++ LTAC
Sbjct: 79 LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138
Query: 327 SHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
+E+G + + I+K Y+ PR+++ ++ +Y + G L A V + P +V
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAG--ISPRDV 194
Query: 386 V 386
V
Sbjct: 195 V 195
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/421 (39%), Positives = 249/421 (59%), Gaps = 13/421 (3%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I + + R + F M + +T + +S F S+ ++
Sbjct: 179 VVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATC-FLSEWEMGDYLV 237
Query: 105 -----HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
HG+V L L G L+DMY + G +D A VF M+ K+ +WNAMI GY
Sbjct: 238 KYIDEHGVVVDLYL-------GNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGY 290
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ G++ +A ++F+EMP RD ISWT+++ G+ EA++ F+EM +S V+PD +T+
Sbjct: 291 AKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVA 350
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+ L+ACA++G+L G +H Y+ K D K +V V N+LID+Y +CG +E A QVF M R
Sbjct: 351 TALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTR 410
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
VSW SII G AVNGF AL F+ M KEG P +F G L AC+H GL++ G+ +F
Sbjct: 411 DSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHF 470
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M+ YR++P ++HYGC+VDL R+G L+ A N ++ MP+ P+ V+ LL+AC+ G+
Sbjct: 471 KSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGN 530
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
++LAE + K L+ LDP + NYVL ++ YA +WD KIR+ M+ +QK SSIE
Sbjct: 531 LVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIE 590
Query: 460 I 460
+
Sbjct: 591 V 591
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 172/382 (45%), Gaps = 67/382 (17%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W I +S R +A + M G +H+TFI L CA + G M+
Sbjct: 81 WNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSD--VRQGQMVRVH 138
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
KLG + + + V AL+ MY FG + +A VFD M + +WN++I GY +
Sbjct: 139 SMKLGFE-SYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQ------ 191
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
F+ F++ L+ FREMQ V D VT++ ++A
Sbjct: 192 ----FNR---------------------FKKVLDLFREMQAINVRADSVTMMKAISATCF 226
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ +G ++ +Y+ + ++ + NTLID+Y R G I+FA +VF +M ++ +VSWN++
Sbjct: 227 LSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAM 286
Query: 288 IVGFAVNGFV-------------------------------GEALEYFNSMQKEGFKPDG 316
I+G+A G + EA++ F M KPD
Sbjct: 287 IMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDE 346
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
++ AL+AC+H G ++ G D ++K + + + ++D+Y + G +E AL V
Sbjct: 347 ITVATALSACAHLGSLDAGEAVHDYIRK-HDIKSDVFVGNSLIDMYCKCGVVEKALQVFN 405
Query: 377 NMPMKPNEVVLGSLLAACRTKG 398
+M + + V S+++ G
Sbjct: 406 DMKTR-DSVSWTSIISGLAVNG 426
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 113/239 (47%), Gaps = 8/239 (3%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+F+++ + W +++G K +A+ + M G++ ++T I + +CA V
Sbjct: 69 VFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSD 128
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
+ G + + +K F+ + V N LI +Y G + A++VF M +R +VSWNSII G
Sbjct: 129 VRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICG 188
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG---LRYFDIMKKIYR 347
+ + L+ F MQ + D V+ A++A E G ++Y D +
Sbjct: 189 YYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYID----EHG 244
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
V + ++D+Y R G ++ A V M K N V +++ G+++ A++L
Sbjct: 245 VVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEK-NIVSWNAMIMGYAKVGNLVAAKKL 302
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
A VF ++ + TL+ WN +I G + + +A+ ++N+M +G + ++F +C+
Sbjct: 66 AHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCAR 125
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHY----GCIVDLYSRAGRLEDALNVVENM 378
+ G M +++ + E Y ++ +Y G L A V + M
Sbjct: 126 VSDVRQGQ-----MVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGM 174
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 155/374 (41%), Positives = 240/374 (64%), Gaps = 2/374 (0%)
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
+ + +++ +LD YA+ M A +F+ M +++ +W+ M+ GY + GD+E A MF
Sbjct: 211 MPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMF 270
Query: 173 DEMP--VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
D+MP ++ ++WT ++ G+ ++G +EA + +M SG+ D IS+L ACA G
Sbjct: 271 DKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAESGL 330
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
L +G+ H + K + N V N L+D+Y++CG ++ A VF M K+ LVSWN+++ G
Sbjct: 331 LSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMPKKDLVSWNTMLHG 390
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
V+G EA+E F+ M+KEG PD V+F L +C+HAGLI++G+ YF M+K+Y + P
Sbjct: 391 LGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVP 450
Query: 351 RIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
++EHYGC+VDL R GRL++A+ VV+ MPM+PN V+ G+LL ACR ++ +A+ ++ L
Sbjct: 451 KVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNL 510
Query: 411 VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAG 470
V LDP NY LL+N+YAA W+G IR MK G++K G SS+E+ GIHEF
Sbjct: 511 VKLDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVF 570
Query: 471 DRSHIESEHIYSML 484
D+SH +S+ IY ML
Sbjct: 571 DKSHPKSDQIYQML 584
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 181/379 (47%), Gaps = 58/379 (15%)
Query: 18 QQNPNQNLTTTPQI------SIQTNNSKSTVN----PTVQWTSSISR-HCRSGRIAEAAL 66
++N +Q+L P++ QTN + N P V +S+ R H + + +A
Sbjct: 44 RRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNVHLCNSLIRAHALNSQPYQAFF 103
Query: 67 EFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD 126
F+ M G ++ T+ LL C+ L + M+H + KLGL +++ V AL+D
Sbjct: 104 VFSEMQRFGLFADNFTYPFLLKACSGL--SWLPVVKMMHNHIEKLGLS-SDIYVPNALID 160
Query: 127 MYAKFGRMDL--ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWT 184
Y++ G + + A +F+ M + + +WN+M+ G ++ G++ A ++FDEMP RD ISW
Sbjct: 161 CYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMPQRDLISWN 220
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
+L+G+ + A E F +M P+ T+ W
Sbjct: 221 TMLDGYARCREMSRAFELFEKM------PERNTVS----------------W-------- 250
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM--HKRTLVSWNSIIVGFAVNGFVGEALE 302
+T++ YS+ G +E AR +F +M + +V+W II G+A G + EA +
Sbjct: 251 ---------STMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADK 301
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
+ M G + D + L AC+ +GL+ G+R I+KK ++ ++D+Y
Sbjct: 302 LVDQMVASGLRFDAAAAISILAACAESGLLSLGMRAHSIIKK-SNLNSNASVLNALLDMY 360
Query: 363 SRAGRLEDALNVVENMPMK 381
++ G L+ A +V +MP K
Sbjct: 361 AKCGSLKKAFDVFNDMPKK 379
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 45/252 (17%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
M +PVR A SW + R FEE L+ L CAN+
Sbjct: 1 MTSSLPVR-APSWVS------SRRIFEERLQD-------------------LPKCANLNQ 34
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
+ +H +++++ ++ + LI S C A +VF ++ + + NS+I
Sbjct: 35 VK---QLHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNVHLCNSLIRA 91
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR--- 347
A+N +A F+ MQ+ G D ++ L ACS GL + ++K ++
Sbjct: 92 HALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-------GLSWLPVVKMMHNHIE 144
Query: 348 ---VSPRIEHYGCIVDLYSRAGRL--EDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+S I ++D YSR G L DA+ + E M + + V S+L G++
Sbjct: 145 KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER-DTVSWNSMLGGLVKAGELRD 203
Query: 403 AERLMKYLVDLD 414
A +L + D
Sbjct: 204 ARKLFDEMPQRD 215
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 180/462 (38%), Positives = 260/462 (56%), Gaps = 36/462 (7%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQC 97
+ST V T+ IS + +G + ALE R L +PN +T ++L CA +
Sbjct: 234 QSTNVDIVVCTAIISGYVLNG-LNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLAT-- 290
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L LG +H + K GLD VG+A++DMYAK GR+DL
Sbjct: 291 LNLGKELHANILKHGLDERR-HVGSAIMDMYAKCGRLDL--------------------- 328
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
A ++F MP +DA+ W A++ + G +EA++ FR+M G+ D V+
Sbjct: 329 ----------AYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVS 378
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I + L+ACAN+ L G IH +++K F V + LID+Y +CG + AR VF M
Sbjct: 379 ISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMR 438
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
++ VSWNSII + +G + +L F+ M ++G +PD V+F L+AC HAG ++ G++
Sbjct: 439 EKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQ 498
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF M + Y + R+EHY CIVDL+ RAGRL +A ++NMP P++ V G+LL ACR
Sbjct: 499 YFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVH 558
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G++ LAE + L+DLDP YVLL+N++A G+W KIR MK RG+QK PG S
Sbjct: 559 GNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSW 618
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
IE+ H F+A D SH ES IYS+L L +L+ GY P+
Sbjct: 619 IEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEGYCPK 660
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 197/401 (49%), Gaps = 41/401 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W I+ ++G + EA+L F+ M G +P+ ITF + L + S L G I
Sbjct: 139 VVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTE--SASLKQGKEI 196
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + + G+ LD++ K +A+ID Y + D
Sbjct: 197 HGYILRHGI----------ALDVFLK----------------------SALIDIYFKCRD 224
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A ++F + D + TA+++G+V G +ALE FR + + P+ VT+ SVL A
Sbjct: 225 VGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPA 284
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA + TL +G +H +LK + V + ++D+Y++CG ++ A Q+F+RM ++ V W
Sbjct: 285 CAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCW 344
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+II + NG EA++ F M +EG D VS + AL+AC++ + G M K
Sbjct: 345 NAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIK 404
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ ++D+Y + G L A V + M K NEV S++AA + G + ++
Sbjct: 405 -GAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREK-NEVSWNSIIAAYGSHGHLEVSL 462
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
L + L+ G+ ++V + +A G AG++ + ++
Sbjct: 463 ALFHKM--LEDGIQPDHVTFLTILSACGH---AGQVDKGIQ 498
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 156/331 (47%), Gaps = 38/331 (11%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F +++I Y G IE A R+FD+MP +D + W +LNGFVK G A++ F +M+
Sbjct: 8 FVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNC 67
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
+P+ +T SVL+ CA+ G +H V+ F + V N L+ +YS+ G + A
Sbjct: 68 QTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDA 127
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
++F M +V+WN +I GF NGF+ EA F+ M G PD ++F L + + +
Sbjct: 128 LKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTES 187
Query: 330 GLIEDG-------LR----------------YFD-----IMKKIYRVSPRIEHYGC--IV 359
++ G LR YF + KI++ S ++ C I+
Sbjct: 188 ASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAII 247
Query: 360 DLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPG 416
Y G DAL + + M PN V L S+L AC + L + L + L G
Sbjct: 248 SGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANI--LKHG 305
Query: 417 VDSNYVL---LANMYAAVGKWDGAGKIRRTM 444
+D + + +MYA G+ D A +I R M
Sbjct: 306 LDERRHVGSAIMDMYAKCGRLDLAYQIFRRM 336
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 164/355 (46%), Gaps = 40/355 (11%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF-LGAMI 104
V W ++ + G A F M T PN ITF ++LS CA S+ L G +
Sbjct: 39 VLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICA---SEALSEFGNQL 95
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HGLV G + +V AL+ MY+KFG++ A +F+ M + TWN MI G+++ G
Sbjct: 96 HGLVISCGF-HFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNG- 153
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ +EA F EM +GV PD +T S L +
Sbjct: 154 ------------------------------FMDEASLLFSEMISAGVSPDSITFASFLPS 183
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
+L G IH Y+L+ +V + + LID+Y +C + A ++F++ +V
Sbjct: 184 VTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVC 243
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMK 343
+II G+ +NG +ALE F + +E P+ V+ L AC+ + G + +I+K
Sbjct: 244 TAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILK 303
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
+ + R I+D+Y++ GRL+ A + MP K + V +++ C G
Sbjct: 304 --HGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEK-DAVCWNAIITNCSQNG 355
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 166/451 (36%), Positives = 263/451 (58%), Gaps = 34/451 (7%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
++ IS + +G EA F + PN +T ++L GCA + L LG IHG V
Sbjct: 413 STMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAA--LPLGQQIHGYV 470
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
+ +R V +AL+DMYAK GR+DL+ +
Sbjct: 471 LRNAYERK-CYVESALMDMYAKCGRLDLSHYI---------------------------- 501
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
F +M +D ++W ++++ F + G +EAL+ FR+M + G++ + +TI + L+ACA++
Sbjct: 502 ---FLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASL 558
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
+ G IH +K K ++ + LID+Y++CG +E A +VF+ M + VSWNSII
Sbjct: 559 PAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSII 618
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
+ +G V E++ + MQ+EG+KPD V+F ++AC+HAGL+E+G++ F M K Y +
Sbjct: 619 SAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLI 678
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
+PR+EH+ C+VDLYSR+G+L+ A+ + +MP KP+ + G+LL ACR ++ LA+ +
Sbjct: 679 APRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQ 738
Query: 409 YLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFM 468
L LDP YVL++N+ A G+WDG K+RR MK I K PG S +++ + H F+
Sbjct: 739 ELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFV 798
Query: 469 AGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
A D+SH ESE IY+ L+ L +L+ GYVP
Sbjct: 799 ASDKSHPESEDIYTSLKTLLQELREEGYVPR 829
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 172/353 (48%), Gaps = 36/353 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W IS ++G EA F M G P+ IT ++LL D L G +H
Sbjct: 309 VTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNG--LKQGKEVH 366
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G + RN V MD+ F +A++D Y + D+
Sbjct: 367 GYIV-----RNCV--------------NMDV-------------FLVSALVDIYFKCRDV 394
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A ++D D + + +++G+V G EEAL+ FR + ++P+ VTI SVL C
Sbjct: 395 RMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGC 454
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ L +G IH YVL+ ++ V + L+D+Y++CG ++ + +F +M ++ V+WN
Sbjct: 455 ASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWN 514
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S+I F+ NG EAL+ F M EG K + ++ + AL+AC+ I G + K
Sbjct: 515 SMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIK- 573
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
+ I ++D+Y++ G LE AL V E MP K NEV S+++A G
Sbjct: 574 GPIKADIFAESALIDMYAKCGNLELALRVFEFMPDK-NEVSWNSIISAYGAHG 625
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 193/442 (43%), Gaps = 72/442 (16%)
Query: 31 ISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLH--GTNPNHITFITLLS 88
+++ + ++ ++ W I +G+ A L + +M H +P+ T ++
Sbjct: 90 VAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVK 149
Query: 89 GCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS 148
CA + + LG ++H +GL N+V VG+AL+ MYA G +
Sbjct: 150 SCAALGA--MSLGRLVHRTARAIGL-ANDVYVGSALVKMYADAGLL-------------- 192
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
G+ A FD +P RD + W +++G +K G + A+ FR M+
Sbjct: 193 --------------GNARDA---FDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRA 235
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
SG EP++ T+ L+ CA L G +H +K + V V NTL+ +Y++C C++
Sbjct: 236 SGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDD 295
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
A ++F+ M + LV+WN +I G NG EA F MQ+ G +PD ++ L A +
Sbjct: 296 AWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTD 355
Query: 329 AGLIEDGLRYFDIMKK------IYRVSPRIEHY------------------------GCI 358
++ G + + ++ VS ++ Y +
Sbjct: 356 LNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTM 415
Query: 359 VDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
+ Y G E+AL + + +KPN V + S+L C + + L +++ Y++ +
Sbjct: 416 ISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLR-NA 474
Query: 416 GVDSNYV--LLANMYAAVGKWD 435
YV L +MYA G+ D
Sbjct: 475 YERKCYVESALMDMYAKCGRLD 496
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 161/354 (45%), Gaps = 38/354 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + ++G + A F M G PN T LS CA L GA +H
Sbjct: 208 VLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDAD--LLSGAQLH 265
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L K GL+ V V LL MYAK +D
Sbjct: 266 SLAVKCGLE-PEVAVANTLLAMYAKCQCLD------------------------------ 294
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A R+F+ MP D ++W +++G V+ G F EA F +MQ SG PD +T++S+L A
Sbjct: 295 -DAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPAL 353
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++ L G +H Y+++ +V + + L+D+Y +C + A+ ++ +V +
Sbjct: 354 TDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGS 413
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKK 344
++I G+ +NG EAL+ F + ++ KP+ V+ L C+ + G + +++
Sbjct: 414 TMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRN 473
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
Y +E ++D+Y++ GRL+ + + M K +EV S++++ G
Sbjct: 474 AYERKCYVE--SALMDMYAKCGRLDLSHYIFLKMSQK-DEVTWNSMISSFSQNG 524
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 119/239 (49%), Gaps = 35/239 (14%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K + V W S IS ++G+ EA F +M + G N+IT LS CA P+ +
Sbjct: 504 KMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPA--I 561
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
+ G IHG+ K G + ++ +AL+DMYAK G ++LA VF+ M K+ +WN++I
Sbjct: 562 YYGKEIHGVTIK-GPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISA 620
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y G ++ +V +LL+G MQ G +PD+VT
Sbjct: 621 YGAHGLVKESV---------------SLLHG----------------MQEEGYKPDHVTF 649
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDF-KDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+++++ACA+ G + G+ + + + K+ ++ ++DLYSR G ++ A Q M
Sbjct: 650 LALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADM 708
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 133/321 (41%), Gaps = 38/321 (11%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGL--DRNNVMVGTALLDMYAKFGRMDLATVV 140
+ +L GC P L LG IH G D N++ + T LL MY R A V
Sbjct: 35 LLAVLRGCVSAPH--LPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAV 92
Query: 141 FDAM---RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
F A+ SS WN +I G+ G AV + +M W+
Sbjct: 93 FSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKM-------WS------------- 132
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
+ PD T+ V+ +CA +G + +G +HR ++V V + L+
Sbjct: 133 ---------HPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALV 183
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
+Y+ G + AR F + +R V WN ++ G G V A+ F +M+ G +P+
Sbjct: 184 KMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFA 243
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
+ L+ C+ + G + + K + P + ++ +Y++ L+DA + E
Sbjct: 244 TLACFLSVCATDADLLSGAQLHSLAVKC-GLEPEVAVANTLLAMYAKCQCLDDAWRLFEL 302
Query: 378 MPMKPNEVVLGSLLAACRTKG 398
MP + + V +++ C G
Sbjct: 303 MP-QDDLVTWNGMISGCVQNG 322
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 110/290 (37%), Gaps = 44/290 (15%)
Query: 218 IISVLNACANVGTLGIGLWIH-RYVLKQDFKD--NVKVCNTLIDLYSRCGCIEFARQVFQ 274
+++VL C + L +GL IH R V+ D ++ + L+ +Y A VF
Sbjct: 35 LLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFS 94
Query: 275 RMHKRTLVS---WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT--------GAL 323
+ + S WN +I GF G A+ ++ M P + T AL
Sbjct: 95 ALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAAL 154
Query: 324 TACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG-------------------CIV----- 359
A S L+ R + +Y S ++ Y C++
Sbjct: 155 GAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMM 214
Query: 360 DLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTKGDIILAERLMKYLVD--LD 414
D +AG ++ A+ + NM +PN L L+ C T D++ +L V L+
Sbjct: 215 DGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLE 274
Query: 415 PGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
P V LLA MYA D A ++ M + G+ S + +G+
Sbjct: 275 PEVAVANTLLA-MYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGL 323
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 260/457 (56%), Gaps = 38/457 (8%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V WT IS + ++G EA F RM + PN TF+++L C L LG
Sbjct: 172 VRDVVSWTGLISGYVKTGLFNEAISLFLRMNVE---PNVGTFVSILGACGKLGR--LNLG 226
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHGLV F + + NA++D YM+
Sbjct: 227 KGIHGLV--------------------------------FKCLYGEELVVCNAVLDMYMK 254
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+ A +MFDEMP +D ISWT+++ G V+ E+L+ F +MQ SG EPD V + SV
Sbjct: 255 CDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVILTSV 314
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+ACA++G L G W+H Y+ K +V + TL+D+Y++CGCI+ A+++F M + +
Sbjct: 315 LSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFNGMPSKNI 374
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+WN+ I G A+NG+ EAL+ F + + G +P+ V+F TAC H GL+++G +YF+
Sbjct: 375 RTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACCHNGLVDEGRKYFNE 434
Query: 342 MKK-IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M +Y +SP +EHYGC+VDL RAG + +A+ +++ MPM P+ +LG+LL++ T G++
Sbjct: 435 MTSPLYNLSPCLEHYGCMVDLLCRAGLVGEAVELIKTMPMPPDVQILGALLSSRNTYGNV 494
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+ ++K L +++ YVLL+N+YA KW +RR MK +GI K PG S I +
Sbjct: 495 GFTQEMLKSLPNVEFQDSGIYVLLSNLYATNKKWAEVRSVRRLMKQKGISKAPGSSIIRV 554
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV 497
HEF+ GD SH +SE IY +L +L+ + L G++
Sbjct: 555 DGMSHEFLVGDNSHPQSEEIYVLLNILANQIYLEGHI 591
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 163/327 (49%), Gaps = 43/327 (13%)
Query: 58 SGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAM--IHGLVCKLGLD 114
SG++ A+ R T+ +G P+ TF +L CA F +G + H + K GL
Sbjct: 86 SGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKFSG----IGEVRQFHSVSVKTGL- 140
Query: 115 RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDE 174
D+Y + N ++ Y GD A ++F++
Sbjct: 141 ---------WCDIYVQ----------------------NTLVHVYSICGDNVGAGKVFED 169
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
M VRD +SWT L++G+VK G F EA+ F M VEP+ T +S+L AC +G L +G
Sbjct: 170 MLVRDVVSWTGLISGYVKTGLFNEAISLFLRMN---VEPNVGTFVSILGACGKLGRLNLG 226
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
IH V K + + + VCN ++D+Y +C + AR++F M ++ ++SW S+I G
Sbjct: 227 KGIHGLVFKCLYGEELVVCNAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQC 286
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
E+L+ F+ MQ GF+PDGV T L+AC+ GL++ G R+ +R+ +
Sbjct: 287 QSPRESLDLFSQMQASGFEPDGVILTSVLSACASLGLLDCG-RWVHEYIDCHRIKWDVHI 345
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMK 381
+VD+Y++ G ++ A + MP K
Sbjct: 346 GTTLVDMYAKCGCIDMAQRIFNGMPSK 372
>gi|293332303|ref|NP_001170755.1| uncharacterized protein LOC100384848 [Zea mays]
gi|238007354|gb|ACR34712.1| unknown [Zea mays]
Length = 464
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 169/451 (37%), Positives = 259/451 (57%), Gaps = 13/451 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC---ADFPSQCLFL-- 100
V T+ H SG+ A+A F M G P+++ L+ C A P+ +
Sbjct: 7 VSRTAMARAHAASGQAAQALAVFRDMIADGVLPDNVALAVALAACHTTASLPAAGMAAAR 66
Query: 101 --GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G M+H ++ G+ +V V T L+ +Y ++G + L+ +FDAM V+S+ +WNAM+
Sbjct: 67 RPGKMVHAIIVTSGI-VPDVFVSTELIRVYGEYGELALSRRLFDAMPVRSTVSWNAMVHQ 125
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM---QISGVEPDY 215
Y+R ++ A +F MP RD +SW ++ G+ G F EALE R+M V P+
Sbjct: 126 YIRHSNVGDAYELFLAMPRRDVVSWNTMIAGYSLVGRFMEALELSRQMISPSSCPVYPNG 185
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
T+ +VL ACA G L G+W+H +V + D+ + +LID+Y +CG IE A QVF++
Sbjct: 186 PTMSTVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYVKCGSIEKALQVFEK 245
Query: 276 M-HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
R L SW ++I G A++G +AL+ F MQ G PD V+ G L AC+H GL+++
Sbjct: 246 APEARDLYSWTTMICGLAMHGRAADALKMFGMMQDNGIHPDDVTLVGVLNACAHCGLVDE 305
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
GLR+F ++K Y ++P+IEHYGC++DL R GRL++A N++ M MKPN V+ G+ L AC
Sbjct: 306 GLRHFYSLEK-YAITPKIEHYGCVIDLLGRVGRLQEAYNIIRTMRMKPNAVIWGAFLNAC 364
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPG 454
+ ++ L E L LDPG V+L+++YA + W+ + RR M I+K PG
Sbjct: 365 KVHSNVELGEIAAAELTRLDPGDPWAKVMLSSLYAKLQDWNSLARERREMNNLQIKKTPG 424
Query: 455 LSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
SSIE+ +HEF+AG H + I ++LE
Sbjct: 425 CSSIELDGEVHEFVAGGFQHPQHGEICTVLE 455
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 44/248 (17%)
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI- 233
MP +S TA+ G +AL FR+M GV PD V + L AC +L
Sbjct: 1 MPDPGLVSRTAMARAHAASGQAAQALAVFRDMIADGVLPDNVALAVALAACHTTASLPAA 60
Query: 234 --------GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
G +H ++ +V V LI +Y G + +R++F M R+ VSWN
Sbjct: 61 GMAAARRPGKMVHAIIVTSGIVPDVFVSTELIRVYGEYGELALSRRLFDAMPVRSTVSWN 120
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKE----------GFK---------------------- 313
+++ + + VG+A E F +M + G+
Sbjct: 121 AMVHQYIRHSNVGDAYELFLAMPRRDVVSWNTMIAGYSLVGRFMEALELSRQMISPSSCP 180
Query: 314 --PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
P+G + + L AC+ AG +E G+ + + R++ ++D+Y + G +E A
Sbjct: 181 VYPNGPTMSTVLAACAGAGCLETGIWVHAFVDR-NRMNDDGSLDRSLIDMYVKCGSIEKA 239
Query: 372 LNVVENMP 379
L V E P
Sbjct: 240 LQVFEKAP 247
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 159/397 (40%), Positives = 250/397 (62%), Gaps = 3/397 (0%)
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
++ G IHG V G D ++V V T L+ MY G + A +FD M VK WNA++
Sbjct: 132 VWFGRQIHGQVVVFGFD-SSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLA 190
Query: 158 GYMRRGDIESAVRMFDEMP--VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
GY + G+++ A + + MP VR+ +SWT +++G+ K G EA+E F+ M + VEPD
Sbjct: 191 GYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDE 250
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
VT+++VL+ACA++G+L +G I YV + V + N +ID+Y++ G I A VF+
Sbjct: 251 VTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFEC 310
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+++R +V+W +II G A +G EAL FN M K G +P+ V+F L+ACSH G ++ G
Sbjct: 311 VNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLG 370
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
R F+ M+ Y + P IEHYGC++DL RAG+L +A V+++MP K N + GSLLAA
Sbjct: 371 KRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASN 430
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
D+ L ER + L+ L+P NY+LLAN+Y+ +G+WD + +R MKG G++K G
Sbjct: 431 VHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGE 490
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
SSIE+ + +++F++GD +H + E I+ +L+ + ++
Sbjct: 491 SSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQ 527
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 116/255 (45%), Gaps = 36/255 (14%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V WT IS + +SGR +EA F RM + P+ +T + +LS CAD S L LG
Sbjct: 212 VRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGS--LELG 269
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
I V G++R V + A++DMYAK G + A VF+ + ++ TW +I G
Sbjct: 270 ERICSYVDHRGMNR-AVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAG--- 325
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G+ EAL F M +GV P+ VT I++
Sbjct: 326 ----------------------------LATHGHGAEALAMFNRMVKAGVRPNDVTFIAI 357
Query: 222 LNACANVGTLGIGLWIHRYVL-KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKR 279
L+AC++VG + +G + + K N++ +IDL R G + A +V + M K
Sbjct: 358 LSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKA 417
Query: 280 TLVSWNSIIVGFAVN 294
W S++ V+
Sbjct: 418 NAAIWGSLLAASNVH 432
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 158/412 (38%), Gaps = 119/412 (28%)
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
GL+R+N+ V ++ + G + A VF +++ N MI A+ +
Sbjct: 42 GLNRDNLNVAK-FIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI----------RALSL 90
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTL 231
DE P +I A+ +R++ +PD T VL V +
Sbjct: 91 LDE-PNAHSI-----------------AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDV 132
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM--------------- 276
G IH V+ F +V V LI +Y CG + AR++F M
Sbjct: 133 WFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGY 192
Query: 277 -------HKRTL-----------VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
R+L VSW +I G+A +G EA+E F M E +PD V+
Sbjct: 193 GKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVT 252
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG---------CIVDLYSRAGRLE 369
L+AC+ G +E G R+ ++H G ++D+Y+++G +
Sbjct: 253 LLAVLSACADLGSLELG----------ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNIT 302
Query: 370 DALNVVE----------------------------------NMPMKPNEVVLGSLLAACR 395
AL+V E ++PN+V ++L+AC
Sbjct: 303 KALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACS 362
Query: 396 TKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
G + L +RL M+ + P ++ +Y + ++ GK A ++ ++M
Sbjct: 363 HVGWVDLGKRLFNSMRSKYGIHPNIE-HYGCMIDLLGRAGKLREADEVIKSM 413
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 164/460 (35%), Positives = 260/460 (56%), Gaps = 7/460 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + IS + G EA F +M L G + T+ ++LS CA+ + G +
Sbjct: 256 VVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACAN--AGFFLHGKQV 313
Query: 105 HGLVCKL----GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
H + + LD + + V AL +Y K G++D A VF+ M VK +WNA++ GY+
Sbjct: 314 HAYILRTEPRPSLDFS-LSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYV 372
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G I+ A F+EMP R+ ++WT +++G + G+ EE+L+ F M+ G EP
Sbjct: 373 NAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAG 432
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+ ACA + L G +H +++ F ++ N LI +Y++CG +E A +F M
Sbjct: 433 AIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLD 492
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
VSWN++I +G +ALE F M KE PD ++F L+ CSHAGL+E+G RYF
Sbjct: 493 SVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFK 552
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M +Y + P +HY ++DL RAG+ +A +++E MP++P + +LLA CR G++
Sbjct: 553 SMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNM 612
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L + + L +L P D YVLL+NMYA VG+WD K+R+ M+ +G++K+PG S IE+
Sbjct: 613 DLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEV 672
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ +H F+ D H E + +Y+ LE L ++ GY+P+T
Sbjct: 673 ENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDT 712
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 209/464 (45%), Gaps = 90/464 (19%)
Query: 65 ALEFTRMTL-HGTNPNHITFITLLSGCA---DFPSQCLFLGAMIHGLVCKLGLDRNNVMV 120
A+E R L +G P++ TF ++L A + QC IH V K G ++
Sbjct: 133 AIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQC----QQIHCAVVKSGSGFVTSVL 188
Query: 121 GTALLDMYAKFGR---------MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
ALL ++ K M A +FD M + +W MI GY+R G++++A +
Sbjct: 189 -NALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQF 247
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTL 231
D M + ++W A+++G+V G+F EALE FR+M + G++ D T SVL+ACAN G
Sbjct: 248 LDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFF 307
Query: 232 GIGLWIHRYVLKQDFKD----NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G +H Y+L+ + + ++ V N L LY +CG ++ ARQVF +M + LVSWN+I
Sbjct: 308 LHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAI 367
Query: 288 IVGF-------------------------------AVNGFVGEALEYFNSMQKEGFKPDG 316
+ G+ A NGF E+L+ FN M+ EGF+P
Sbjct: 368 LSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCD 427
Query: 317 VSFTGALTACS-----------HAGLIEDG----LRYFDIMKKIYRVSPRIEHYGCI--- 358
+F GA+ AC+ HA L+ G L + + +Y +E C+
Sbjct: 428 YAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLT 487
Query: 359 ------------VDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILA 403
+ + G AL + E M + P+ + ++L+ C G +
Sbjct: 488 MPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEG 547
Query: 404 ERLMKYLVDLD---PGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
R K + L PG D +Y + ++ GK+ A + TM
Sbjct: 548 HRYFKSMSGLYGICPGED-HYARMIDLLCRAGKFSEAKDMIETM 590
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 128/307 (41%), Gaps = 52/307 (16%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP--VRDAI 181
L+D+Y K + A +FD +R +I + G+ A +F P +RD +
Sbjct: 56 LIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTV 115
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA-NVGTLGIGLWIHRY 240
+ A++ G+ A+E FR++ +G PD T SVL A A V IH
Sbjct: 116 CYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCA 175
Query: 241 VLKQDFKDNVKVCNTLIDLYSRC------------------------------------- 263
V+K V N L+ ++ +C
Sbjct: 176 VVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGY 235
Query: 264 ---GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT 320
G ++ ARQ M ++ +V+WN++I G+ +GF EALE F M G + D ++T
Sbjct: 236 VRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYT 295
Query: 321 GALTACSHAGLIEDGLRYFDIMKKIYRVSPR------IEHYGCIVDLYSRAGRLEDALNV 374
L+AC++AG G + + I R PR + + LY + G++++A V
Sbjct: 296 SVLSACANAGFFLHGKQ---VHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQV 352
Query: 375 VENMPMK 381
MP+K
Sbjct: 353 FNQMPVK 359
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 150/365 (41%), Positives = 235/365 (64%), Gaps = 1/365 (0%)
Query: 117 NVMVGTALLDMYAK-FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM 175
+V+ + ++D Y K G ++ A V FD+M + +WN+MIDGY + G++E A +FB+M
Sbjct: 206 DVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFBKM 265
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
++ ISW+ +++G+ +EAL FR+M G++PD V+++ ++AC+ +G L G
Sbjct: 266 LQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGR 325
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
WIH Y+ + ++ V L+D+Y +CG + AR +F M +R +VSWN +IVG +NG
Sbjct: 326 WIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLGMNG 385
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
F EALE F M+ E D + F G L ACSHA L+ +GL F+ MK +YR+ P++EHY
Sbjct: 386 FGKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHY 445
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
GC+VDL RAG+L+ N++++MPMKPN + GSLL ACR ++ LAE +++ L +L
Sbjct: 446 GCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKA 505
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
YVL++N+YA VG W+G +IR+ MK R ++K G S IE+ + EF++G++SHI
Sbjct: 506 DDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHI 565
Query: 476 ESEHI 480
E I
Sbjct: 566 LREEI 570
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 149/363 (41%), Gaps = 51/363 (14%)
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
+ +L ++A+ +L + F A R+ S + ++ A +F ++ ++
Sbjct: 25 SQILQIHAQLITTNLISDTFAASRLLDSVVSKTL--------NVNYAELVFAQIHQPNSF 76
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
++ + + E AL + EM+ G+ D T VL AC + L G +
Sbjct: 77 ICNTMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEA 136
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
+K+ F +V V N LI +Y RCG +AR VF ++ LVSWNS++ G+ G + A
Sbjct: 137 VKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQ 196
Query: 302 EYFNSMQK----------EGFKP------------------DGVSFTGALTACSHAGLIE 333
F+ M + +G+ D VS+ + + G +E
Sbjct: 197 NMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEME 256
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSL 390
FB M + + + ++D Y+ ++ALN+ M +KP+ V +
Sbjct: 257 VAREIFBKM-----LQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGA 311
Query: 391 LAACRTKGDIILAERLMKYL----VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKG 446
++AC G + + Y+ + LD V + L +MY G D A I +M
Sbjct: 312 VSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTA---LVDMYLKCGSXDEARXIFNSMPE 368
Query: 447 RGI 449
R +
Sbjct: 369 RNV 371
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 268/465 (57%), Gaps = 49/465 (10%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTN--PNHITFITLLSGCADFPSQCLFLGAMIH 105
W + I + S ++ L F RM LH + P+ TF L+ ++ + LF G H
Sbjct: 103 WNTLIRAYASSSNPHQSLLIFLRM-LHQSPDFPDKFTFPFLIKAASEL--EELFTGKAFH 159
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G+V K+ L ++V + +L+ YAK G + L GY
Sbjct: 160 GMVIKVLLG-SDVFILNSLIHFYAKCGELGL---------------------GY------ 191
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
R+F P RD +SW +++ FV+ G EEALE F+EM+ V+P+ +T++ VL+AC
Sbjct: 192 ----RVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSAC 247
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A G W+H Y+ + +++ + N ++D+Y++CG +E A+++F +M ++ +VSW
Sbjct: 248 AKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWT 307
Query: 286 SIIVGFA------------VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
+++VG+A ++G +A+ F+ MQ++ KP+ V+FT L ACSH GL+E
Sbjct: 308 TMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVE 367
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
+G +F+ M+ +Y V P ++HY C+VD+ RAG LE+A+ ++E MPM P V G+LL A
Sbjct: 368 EGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGA 427
Query: 394 CRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKP 453
C +++LAE+ L++L+PG YVLL+N+YA GKWD +R+ M+ G++K+P
Sbjct: 428 CTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEP 487
Query: 454 GLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
G SSIE+ +HEF+ GD SH ++ IY+ L+ + L+ GYVP
Sbjct: 488 GCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVP 532
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 137/326 (42%), Gaps = 56/326 (17%)
Query: 72 TLHGTNPNHITF-----------ITLLSGCADFPSQCLFLGAMIHGLVCKLGL-----DR 115
+L NPN IT ++L+ C++ IH + + GL
Sbjct: 16 SLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQL-----KQIHAQMLRTGLFFDPFSA 70
Query: 116 NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM 175
+ ++ AL + F +D A VFD + + +TWN +I Y + ++ +F
Sbjct: 71 SRLITAAAL----SPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIF--- 123
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
R + S PD T ++ A + + L G
Sbjct: 124 ---------------------------LRMLHQSPDFPDKFTFPFLIKAASELEELFTGK 156
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
H V+K +V + N+LI Y++CG + +VF +R +VSWNS+I F G
Sbjct: 157 AFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGG 216
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
EALE F M+ + KP+G++ G L+AC+ E G R+ + R+ +
Sbjct: 217 CPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFG-RWVHSYIERNRIXESLTLS 275
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMK 381
++D+Y++ G +EDA + + MP K
Sbjct: 276 NAMLDMYTKCGSVEDAKRLFDKMPEK 301
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 37/240 (15%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA---DFPSQCLFLG 101
V W S I+ + G EA F M PN IT + +LS CA DF G
Sbjct: 202 VVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFE-----FG 256
Query: 102 AMIHGLVCKLGLDRNNVM----VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
+H + +RN + + A+LDMY K G ++ A +FD M K +W M+
Sbjct: 257 RWVHSYI-----ERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLV 311
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GY + G+ ++A G G+ ++A+ F +MQ V+P+ VT
Sbjct: 312 GYAKIGEYDAA-------------------QGLAMHGHGKDAIALFSKMQEDKVKPNAVT 352
Query: 218 IISVLNACANVGTLGIG-LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
++L AC++VG + G + ++ L VK ++D+ R G +E A ++ ++M
Sbjct: 353 FTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKM 412
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 167/421 (39%), Positives = 249/421 (59%), Gaps = 13/421 (3%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I + + R + F M + +T + +S F S+ ++
Sbjct: 138 VVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATC-FLSEWEMGDYLV 196
Query: 105 -----HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
HG+V L L G L+DMY + G +D A VF M+ K+ +WNAMI GY
Sbjct: 197 KYIDEHGVVVDLYL-------GNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGY 249
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ G++ +A ++F+EMP RD ISWT+++ G+ EA++ F+EM +S V+PD +T+
Sbjct: 250 AKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVA 309
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+ L+ACA++G+L G +H Y+ K D K +V V N+LID+Y +CG +E A QVF M R
Sbjct: 310 TALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTR 369
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
VSW SII G AVNGF AL F+ M KEG P +F G L AC+H GL++ G+ +F
Sbjct: 370 DSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHF 429
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M+ YR++P ++HYGC+VDL R+G L+ A N ++ MP+ P+ V+ LL+AC+ G+
Sbjct: 430 KSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGN 489
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
++LAE + K L+ LDP + NYVL ++ YA +WD KIR+ M+ +QK SSIE
Sbjct: 490 LVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIE 549
Query: 460 I 460
+
Sbjct: 550 V 550
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 174/387 (44%), Gaps = 68/387 (17%)
Query: 44 PTVQ-WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
PT+ W I +S R +A + M G +H+TFI L CA + G
Sbjct: 35 PTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSD--VRQGQ 92
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
M+ KLG + + V AL+ MY FG + +A VFD M + +WN++I GY +
Sbjct: 93 MVRVHSMKLGFESXS-FVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQ- 150
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
F+ F++ L+ FREMQ V D VT++ +
Sbjct: 151 ---------FNR---------------------FKKVLDLFREMQAINVRADSVTMMKAI 180
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+A + +G ++ +Y+ + ++ + NTLID+Y R G I+FA +VF +M ++ +V
Sbjct: 181 SATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIV 240
Query: 283 SWNSIIVGFAVNGFV-------------------------------GEALEYFNSMQKEG 311
SWN++I+G+A G + EA++ F M
Sbjct: 241 SWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSM 300
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
KPD ++ AL+AC+H G ++ G D ++K + + + ++D+Y + G +E A
Sbjct: 301 VKPDEITVATALSACAHLGSLDAGEAVHDYIRK-HDIKSDVFVGNSLIDMYCKCGVVEKA 359
Query: 372 LNVVENMPMKPNEVVLGSLLAACRTKG 398
L V +M + + V S+++ G
Sbjct: 360 LQVFNDMKTR-DSVSWTSIISGLAVNG 385
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 8/239 (3%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+F+++ + W +++G K +A+ + M G++ ++T I + +CA V
Sbjct: 28 VFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSD 87
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
+ G + + +K F+ V N LI +Y G + A++VF M +R +VSWNSII G
Sbjct: 88 VRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICG 147
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG---LRYFDIMKKIYR 347
+ + L+ F MQ + D V+ A++A E G ++Y D +
Sbjct: 148 YYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYID----EHG 203
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
V + ++D+Y R G ++ A V M K N V +++ G+++ A++L
Sbjct: 204 VVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEK-NIVSWNAMIMGYAKVGNLVAAKKL 261
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 163/454 (35%), Positives = 266/454 (58%), Gaps = 35/454 (7%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF------ 131
P TF +L+ C + + LG M+H + K G + +++ V TAL+D Y+K
Sbjct: 136 PTSYTFSSLVKACTFMCA--VELGQMVHCHIWKKGFE-SHLFVQTALVDFYSKLEILSEA 192
Query: 132 -------------------------GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
G MD A +F+ M +++ TWN MIDGY R G++E
Sbjct: 193 RKVFDEMCERDAFAWTAMLSALARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVE 252
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
SA +F++MP +D ISWT ++ + + +++AL + EM+++G+ PD VT+ +V +ACA
Sbjct: 253 SAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACA 312
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
++G L +G IH YV+ Q +V + + L+D+Y++CG ++ + +F ++ + L WN+
Sbjct: 313 HIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNA 372
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I G AV+G+ +AL F M++E P+GV+F L+AC+HAGL+++G F M + Y
Sbjct: 373 VIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDY 432
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+ P I HYGC+VD+ S++G L +AL ++++M +PN ++ G+LL C+ G+ +AE
Sbjct: 433 DIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDA 492
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK-PGLSSIEIGSGIH 465
++ L+ L+P +Y LL +MYA W IR MK +G++KK PG S IE+ IH
Sbjct: 493 VEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIH 552
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+F A SH +S+ IY +L L LKL GY+ E
Sbjct: 553 QFSASADSHPDSDKIYFILTELDGQLKLAGYILE 586
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 125/254 (49%), Gaps = 45/254 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ WT+ I+ + ++ + +A ++ M L+G P+ +T T+ S CA + L LG IH
Sbjct: 267 ISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGA--LELGKEIH 324
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V GL+ + V +G+AL+DMYAK G +DL+ ++F + K+ + WNA+I+G G
Sbjct: 325 HYVMSQGLNLD-VYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYA 383
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A+RMF AI M+ + P+ VT IS+L+AC
Sbjct: 384 EKALRMF-------AI------------------------MEREKIMPNGVTFISILSAC 412
Query: 226 ANVGTLGIG----LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
+ G + G L + R D + +++ ++D+ S+ G + A ++ + M
Sbjct: 413 THAGLVDEGRSRFLSMTR---DYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEP- 468
Query: 282 VSWNSIIVGFAVNG 295
NSII G +NG
Sbjct: 469 ---NSIIWGALLNG 479
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 20/298 (6%)
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
++ F + I + V F +M + + A++ GFV GY AL+C+
Sbjct: 68 IQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVH 127
Query: 206 M-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
M + S V P T S++ AC + + +G +H ++ K+ F+ ++ V L+D YS+
Sbjct: 128 MLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLE 187
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
+ AR+VF M +R +W +++ A G + A + F M + + ++ +
Sbjct: 188 ILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSARKLFEEMPER----NTATWNTMID 243
Query: 325 ACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK--- 381
+ G +E F+ M + I + ++ YS+ + +DAL + M +
Sbjct: 244 GYTRLGNVESAELLFNQMP-----TKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGII 298
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYL----VDLDPGVDSNYVLLANMYAAVGKWD 435
P+EV + ++ +AC G + L + + Y+ ++LD + S L +MYA G D
Sbjct: 299 PDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSA---LVDMYAKCGSLD 353
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 156/403 (38%), Positives = 242/403 (60%), Gaps = 2/403 (0%)
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM-RVKSSFTWNAMID 157
FLG+ +H L K G ++ V AL Y G + VFD + RV+ TWNA++
Sbjct: 147 FLGSHVHALAVKAGA-AGDLYVRNALTHFYGVCGDVGAMRTVFDELPRVRDVVTWNAVLA 205
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GY+R G + +A +F+EMPVRD +SW+ L+ G+VK G + AL FR+M GV +
Sbjct: 206 GYVRAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDMVEKGVRVNEAA 265
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+++ L+A A +G L G ++H V + +V V L+D++S+CGC+ AR+VF M
Sbjct: 266 VVTALSAAAQMGLLEHGRFVHEVVQRTGMPVSVNVGAALVDMFSKCGCVAVAREVFDGMP 325
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+R + +WN++I G A +G +A+E F EG P ++F G L ACS GL+ +G R
Sbjct: 326 RRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNACSRCGLVAEGRR 385
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF +M YR+ P +EHYGC+VDL RAG + +A+ ++E M + P+ V+ G++L+AC+T
Sbjct: 386 YFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGMHIAPDPVLWGTVLSACKTH 445
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
+ L + L++L+P D +YVLLA++YA KWD ++R+ M RG K G S
Sbjct: 446 NLVDLGITVGNKLIELEPAHDGHYVLLASIYAKAKKWDEVREVRKLMSSRGTGKSAGWSL 505
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+E +H+F+ GD H +S IY+ML++++ L GYVP+
Sbjct: 506 MEAQGNLHKFLVGDMDHKDSVQIYNMLDMINRRLADAGYVPDV 548
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 174/461 (37%), Positives = 263/461 (57%), Gaps = 30/461 (6%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I+ + + G EA F +M G+ PN +T I++LS CA + G IH
Sbjct: 374 VTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGA--FSQGTEIH 431
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
K LL + FG D +V+ NA+ID Y +
Sbjct: 432 AYSLK-----------NCLLTLDNDFGGEDEDLMVY-----------NALIDMYSKCRSF 469
Query: 166 ESAVRMFDEMPV--RDAISWTALLNGFVKRGYFEEALECFREM--QISGVEPDYVTIISV 221
++A +FD++P+ R+ ++WT ++ G + G +AL+ F EM + GV P+ TI +
Sbjct: 470 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 529
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVK--VCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACA++ + IG IH YVL+ ++ V N LID+YS+CG ++ AR VF M ++
Sbjct: 530 LMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK 589
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+ +SW S++ G+ ++G EAL+ F+ M+K GF PD ++F L ACSH G+++ GL YF
Sbjct: 590 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYF 649
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
D M Y ++PR EHY C +DL +R+GRL+ A V++MPM+P VV +LL+ACR +
Sbjct: 650 DSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSN 709
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ LAE + LV+++ D +Y L++N+YA G+W +IR MK GI+K+PG S ++
Sbjct: 710 VELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 769
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
G F GDRSH S IY++LE L +K GYVPET
Sbjct: 770 GQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPET 810
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 190/372 (51%), Gaps = 42/372 (11%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTL--HGTNPNH----ITFITLLSGCADFPS 95
++ + W S +S H +S A F++MTL H N I+ + +L C
Sbjct: 228 IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL-- 285
Query: 96 QCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAM 155
+ + +HG + G +V VG AL+D YAK G M+ A VF+ M K +WNAM
Sbjct: 286 KAVPQTKEVHGNAIRNG-TFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 344
Query: 156 IDGYMRRGDIESAVRMFDEM-----PVRDAISWTALLNGFVKRGYFEEALECFREMQISG 210
+ GY + G+ E+A +F M P+ D ++WTA++ G+ +RG EAL FR+M SG
Sbjct: 345 VAGYSQSGNFEAAFELFKNMRKENIPL-DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSG 403
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLK-------QDF---KDNVKVCNTLIDLY 260
P+ VTIISVL+ACA++G G IH Y LK DF +++ V N LID+Y
Sbjct: 404 SLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 463
Query: 261 SRCGCIEFARQVFQR--MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE--GFKPDG 316
S+C + AR +F + +R +V+W +I G A G +AL+ F M E G P+
Sbjct: 464 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 523
Query: 317 VSFTGALTACSHAGLIEDG-------LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
+ + L AC+H I G LR+ Y V+ C++D+YS+ G ++
Sbjct: 524 YTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVA------NCLIDMYSKCGDVD 577
Query: 370 DALNVVENMPMK 381
A +V ++M K
Sbjct: 578 TARHVFDSMSQK 589
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 150/308 (48%), Gaps = 33/308 (10%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPS-QC 97
+ T +P V W I H + GR+ A RM GT P+H T +L C + PS +C
Sbjct: 121 RVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRC 180
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR---VKSSFTWNA 154
G+ HGL+C G + +NV + AL+ MY++ G ++ A+++FD + + +WN+
Sbjct: 181 ---GSAFHGLICCNGFE-SNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNS 236
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
++ +++ + +A+ +F +M + + + D
Sbjct: 237 IVSAHVKSSNAWTALDLFSKMTL-------------------------IVHEKPTNERSD 271
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
++I+++L AC ++ + +H ++ +V V N LID Y++CG +E A +VF
Sbjct: 272 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 331
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
M + +VSWN+++ G++ +G A E F +M+KE D V++T + S G +
Sbjct: 332 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 391
Query: 335 GLRYFDIM 342
L F M
Sbjct: 392 ALNLFRQM 399
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 121/265 (45%), Gaps = 15/265 (5%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
++ Y+ G + A+ + + + A+ W L+ +K+G + A+ M +G PD
Sbjct: 102 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 161
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+ T+ VL AC + + G H + F+ NV +CN L+ +YSRCG +E A +F
Sbjct: 162 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 221
Query: 275 RMHKR---TLVSWNSIIVGFAVNGFVGEALEYFNSM------QKEGFKPDGVSFTGALTA 325
+ +R ++SWNSI+ + AL+ F+ M + + D +S L A
Sbjct: 222 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 281
Query: 326 CSHAGLIEDGLRYFDIMKKIYR--VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPN 383
C G ++ + ++ R P + ++D Y++ G +E+A+ V M K +
Sbjct: 282 C---GSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK-D 337
Query: 384 EVVLGSLLAACRTKGDIILAERLMK 408
V +++A G+ A L K
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFK 362
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 155/416 (37%), Positives = 248/416 (59%), Gaps = 5/416 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I + + R+ EA + M G PN + + L+S C + + G
Sbjct: 281 VVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGR--TMAVSEGQQF 338
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG++ + G D + + T ++ YA G ++LA + F+ +WNA+I G++R G
Sbjct: 339 HGIIVRTGFDCYDFIQAT-IIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGM 397
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
IE A ++FDEMP RD SW+++++G+ + + AL+ F EM GV+P+ +T++SV +A
Sbjct: 398 IEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSA 457
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR--TLV 282
A +GTL G W H Y+L N + LID+Y++CG I A Q+F + R ++
Sbjct: 458 IATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVS 517
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
WN+II G A++G +L+ F+ +Q+ KP+ ++F G L+AC HAGL++ G +YF M
Sbjct: 518 PWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGM 577
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
K +Y + P I+HYGC++DL RAGRL++A ++ MPMK + V+ G+LLAACRT G++ +
Sbjct: 578 KNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEI 637
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
ER + L LD + VLL+N+YA G+WD A +RR M+ + ++K PG S +
Sbjct: 638 GERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGCSGV 693
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 211/477 (44%), Gaps = 77/477 (16%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K + V +T+ + ++ EA F M G PN +T +++S + +
Sbjct: 143 KMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGG--I 200
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
M+H L KLGL+ N+ V T L+ MY + A V+FD + ++ TWN M++G
Sbjct: 201 LNCRMLHALSFKLGLEALNI-VATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNG 259
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + G ++ A +F+ +P +D +SW +++G+V+ EAL +R M +GV P+ V I
Sbjct: 260 YSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMI 319
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDF-------------------------------K 247
+ +++AC + G H +++ F K
Sbjct: 320 VDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSK 379
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
D+V N LI + R G IE ARQ+F M +R + SW+S+I G++ N AL+ F+ M
Sbjct: 380 DHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEM 439
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKKIYRVSPRIEHYGCIVDLYSRAG 366
G +P+ ++ +A + G + +G + I+ ++ + ++D+Y++ G
Sbjct: 440 VAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLN--AALIDMYAKCG 497
Query: 367 RLEDALNV------------------------------------VENMPMKPNEVVLGSL 390
+ AL + ++ + +KPN + +
Sbjct: 498 SITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGV 557
Query: 391 LAACRTKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
L+AC G + E+ MK L +++P + +Y + ++ G+ A ++ R M
Sbjct: 558 LSACCHAGLVDTGEKYFKGMKNLYNIEPNI-KHYGCMIDLLGRAGRLKEAAEMIRKM 613
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 163/337 (48%), Gaps = 44/337 (13%)
Query: 44 PTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNH-----ITFITLLSGCADFPSQCL 98
P ++W S+ ++ ++ R +G +T ++ L C+ + L
Sbjct: 16 PNLKWVSA-----APSQLPPHPIDHLRAFFNGNKDTQHSDYELTLVSALKSCSSLLA--L 68
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G IH LV K GL +N+ V +L+ Y K + A +FD V + N M+ G
Sbjct: 69 SQGQQIHSLVFKSGL-LSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAG 127
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y++ G +++A +F++MP++ +S+T ++ G + + EA+ F++M+ +GV P+ VT+
Sbjct: 128 YVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTL 187
Query: 219 ISVLNACANVG-----------TLGIGL---------WIHRYVLKQDFKD---------- 248
SV++A ++VG + +GL +H Y + +
Sbjct: 188 ASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPE 247
Query: 249 -NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
NV N +++ YS+ G ++ AR +F+R+ + +VSW +II G+ +GEAL + SM
Sbjct: 248 RNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSM 307
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+ G P+ V ++AC + +G ++ I+ +
Sbjct: 308 LRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVR 344
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 174/451 (38%), Positives = 270/451 (59%), Gaps = 12/451 (2%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ RM H +P+ TF LL + P L LG H + GLD++ V T+LL+M
Sbjct: 50 YLRMRNHRVSPDFHTFPFLLPSFHN-PLH-LPLGQRTHAQILLFGLDKDP-FVRTSLLNM 106
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y+ G + A VFD K WN++++ Y + G I+ A ++FDEMP R+ ISW+ L+
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 188 NGFVKRGYFEEALECFREMQISG-----VEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
NG+V G ++EAL+ FREMQ+ V P+ T+ +VL+AC +G L G W+H Y+
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFVGEAL 301
K + ++ + LID+Y++CG +E A++VF + K+ + +++++I A+ G E
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECF 286
Query: 302 EYFNSMQ-KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
+ F+ M + P+ V+F G L AC H GLI +G YF +M + + ++P I+HYGC+VD
Sbjct: 287 QLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVD 346
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
LY R+G +++A + + +MPM+P+ ++ GSLL+ R GDI E +K L++LDP
Sbjct: 347 LYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGA 406
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHI 480
YVLL+N+YA G+W IR M+ +GI K PG S +E+ +HEF+ GD S ESE I
Sbjct: 407 YVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERI 466
Query: 481 YSMLELLSFDLKLCGYVPET--VAGELYEND 509
Y+ML+ + L+ GYV +T V +L E D
Sbjct: 467 YAMLDEIMQRLREAGYVTDTKEVLLDLNEKD 497
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 37/220 (16%)
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL 259
+ + M+ V PD+ T +L + N L +G H +L + V +L+++
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 260 YSRC-------------------------------GCIEFARQVFQRMHKRTLVSWNSII 288
YS C G I+ AR++F M +R ++SW+ +I
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 289 VGFAVNGFVGEALEYFNSMQ----KEGF-KPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
G+ + G EAL+ F MQ E F +P+ + + L+AC G +E G +
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPN 383
K Y V I ++D+Y++ G LE A V + K +
Sbjct: 227 K-YHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 229/381 (60%)
Query: 120 VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD 179
V + + MYA G + F + AM+ GD+++A +FD MP RD
Sbjct: 161 VQSGAVSMYAAVGDVGAVRAAFAEIVSPDVVCVTAMLGALSAGGDVDTARELFDGMPQRD 220
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHR 239
++W A+L G+V+ G EAL F EMQ +GV VT++SVL ACA +G L G+W+H
Sbjct: 221 HVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMWVHS 280
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
YV + + +V + L+D+YS+CG + + +VF+ M +R + +W S + G A+NG E
Sbjct: 281 YVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEE 340
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
LE F M+ G +P+GV+F L CS AGL+E+G FD MK ++V P +EHYGC+V
Sbjct: 341 CLELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMV 400
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
DLY RAGRL+DA++ + +MP++P+E V G+LL A R ++ L + M L +++ D+
Sbjct: 401 DLYGRAGRLDDAVDFINSMPVEPHEGVWGALLNASRIHNNVDLGKHAMHKLTEIESKNDA 460
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEH 479
+VLL+N+YA W G K+R MK +G++K PG S+IE+ +HEF G +SH +
Sbjct: 461 AHVLLSNIYAESHNWKGVSKVRNMMKSKGVKKMPGCSAIEVDGKVHEFFVGSKSHPRYKD 520
Query: 480 IYSMLELLSFDLKLCGYVPET 500
I +ML +S L+L GY T
Sbjct: 521 IQTMLAEMSHRLRLQGYAANT 541
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 45/237 (18%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + ++ + R GR EA F M G + +T +++L+ CA + L G +H
Sbjct: 222 VAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGA--LERGMWVH 279
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
VC G+ R +V +GTAL+DMY+K G + ++ VF+ MR ++ +TW
Sbjct: 280 SYVCSRGM-RVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTW------------- 325
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
T+ L+G G EE LE F+ M+ +G+EP+ VT ++VL C
Sbjct: 326 ------------------TSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGC 367
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKV------CNTLIDLYSRCGCIEFARQVFQRM 276
+ G + G KD KV ++DLY R G ++ A M
Sbjct: 368 SVAGLVEEG-----RACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSM 419
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 174/461 (37%), Positives = 263/461 (57%), Gaps = 30/461 (6%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I+ + + G EA F +M G+ PN +T I++LS CA + G IH
Sbjct: 367 VTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGA--FSQGTEIH 424
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
K LL + FG D +V+ NA+ID Y +
Sbjct: 425 AYSLK-----------NCLLTLDNDFGGEDEDLMVY-----------NALIDMYSKCRSF 462
Query: 166 ESAVRMFDEMPV--RDAISWTALLNGFVKRGYFEEALECFREM--QISGVEPDYVTIISV 221
++A +FD++P+ R+ ++WT ++ G + G +AL+ F EM + GV P+ TI +
Sbjct: 463 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 522
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVK--VCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACA++ + IG IH YVL+ ++ V N LID+YS+CG ++ AR VF M ++
Sbjct: 523 LMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK 582
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+ +SW S++ G+ ++G EAL+ F+ M+K GF PD ++F L ACSH G+++ GL YF
Sbjct: 583 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYF 642
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
D M Y ++PR EHY C +DL +R+GRL+ A V++MPM+P VV +LL+ACR +
Sbjct: 643 DSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSN 702
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ LAE + LV+++ D +Y L++N+YA G+W +IR MK GI+K+PG S ++
Sbjct: 703 VELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 762
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
G F GDRSH S IY++LE L +K GYVPET
Sbjct: 763 GQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPET 803
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 190/372 (51%), Gaps = 42/372 (11%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTL--HGTNPNH----ITFITLLSGCADFPS 95
++ + W S +S H +S A F++MTL H N I+ + +L C
Sbjct: 221 IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL-- 278
Query: 96 QCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAM 155
+ + +HG + G +V VG AL+D YAK G M+ A VF+ M K +WNAM
Sbjct: 279 KAVPQTKEVHGNAIRNG-TFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 337
Query: 156 IDGYMRRGDIESAVRMFDEM-----PVRDAISWTALLNGFVKRGYFEEALECFREMQISG 210
+ GY + G+ E+A +F M P+ D ++WTA++ G+ +RG EAL FR+M SG
Sbjct: 338 VAGYSQSGNFEAAFELFKNMRKENIPL-DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSG 396
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLK-------QDF---KDNVKVCNTLIDLY 260
P+ VTIISVL+ACA++G G IH Y LK DF +++ V N LID+Y
Sbjct: 397 SLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 456
Query: 261 SRCGCIEFARQVFQR--MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE--GFKPDG 316
S+C + AR +F + +R +V+W +I G A G +AL+ F M E G P+
Sbjct: 457 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 516
Query: 317 VSFTGALTACSHAGLIEDG-------LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
+ + L AC+H I G LR+ Y V+ C++D+YS+ G ++
Sbjct: 517 YTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVA------NCLIDMYSKCGDVD 570
Query: 370 DALNVVENMPMK 381
A +V ++M K
Sbjct: 571 TARHVFDSMSQK 582
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 150/308 (48%), Gaps = 33/308 (10%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPS-QC 97
+ T +P V W I H + GR+ A RM GT P+H T +L C + PS +C
Sbjct: 114 RVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRC 173
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR---VKSSFTWNA 154
G+ HGL+C G + +NV + AL+ MY++ G ++ A+++FD + + +WN+
Sbjct: 174 ---GSAFHGLICCNGFE-SNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNS 229
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
++ +++ + +A+ +F +M + + + D
Sbjct: 230 IVSAHVKSSNAWTALDLFSKMTL-------------------------IVHEKPTNERSD 264
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
++I+++L AC ++ + +H ++ +V V N LID Y++CG +E A +VF
Sbjct: 265 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 324
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
M + +VSWN+++ G++ +G A E F +M+KE D V++T + S G +
Sbjct: 325 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 384
Query: 335 GLRYFDIM 342
L F M
Sbjct: 385 ALNLFRQM 392
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 121/265 (45%), Gaps = 15/265 (5%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
++ Y+ G + A+ + + + A+ W L+ +K+G + A+ M +G PD
Sbjct: 95 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 154
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+ T+ VL AC + + G H + F+ NV +CN L+ +YSRCG +E A +F
Sbjct: 155 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 214
Query: 275 RMHKRTL---VSWNSIIVGFAVNGFVGEALEYFNSM------QKEGFKPDGVSFTGALTA 325
+ +R + +SWNSI+ + AL+ F+ M + + D +S L A
Sbjct: 215 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 274
Query: 326 CSHAGLIEDGLRYFDIMKKIYR--VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPN 383
C G ++ + ++ R P + ++D Y++ G +E+A+ V M K +
Sbjct: 275 C---GSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK-D 330
Query: 384 EVVLGSLLAACRTKGDIILAERLMK 408
V +++A G+ A L K
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFK 355
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 168/475 (35%), Positives = 262/475 (55%), Gaps = 40/475 (8%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
+A L F M G +P+H T+ +L C+ S L +G +HG V K+GLD N + VG
Sbjct: 116 DALLVFRDMVSGGFSPDHYTYPCVLKACS--CSDNLRIGLQLHGAVFKVGLDLN-LFVGN 172
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAV------------- 169
L+ +Y K G + A V D M+ K +WN+M+ GY + + A+
Sbjct: 173 GLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKP 232
Query: 170 ------------------------RMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
MF + + +SW +++ ++K ++++ + +
Sbjct: 233 DACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQ 292
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
M VEPD +T SVL AC ++ L +G IH YV ++ N+ + N+LID+Y+RCGC
Sbjct: 293 MGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGC 352
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+E A++VF RM R + SW S+I + + G A+ F MQ G PD ++F L+A
Sbjct: 353 LEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSA 412
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
CSH+GL+ +G YF M Y+++P IEH+ C+VDL R+GR+++A N+++ MPMKPNE
Sbjct: 413 CSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNER 472
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
V G+LL++CR ++ + L+ L P YVLL+N+YA G+W IR MK
Sbjct: 473 VWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMK 532
Query: 446 GRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
R I+K PG+S++E+ + +H F+AGD H +S+ IY L +L +K GYVP+T
Sbjct: 533 RRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKT 587
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 145/310 (46%), Gaps = 29/310 (9%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
++ Y RG+ A +FD +P R+ I + ++ ++ +++AL FR+M G PD
Sbjct: 73 LMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPD 132
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+ T VL AC+ L IGL +H V K N+ V N LI LY +CGC+ AR V
Sbjct: 133 HYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLD 192
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG---- 330
M + +VSWNS++ G+A N +AL+ M KPD + L A ++
Sbjct: 193 EMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENV 252
Query: 331 ---------LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L + L +++M +Y + G VDLY + G+ E ++
Sbjct: 253 LYVEEMFMNLEKKSLVSWNVMISVYM---KNSMPGKSVDLYLQMGKCE----------VE 299
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYL--VDLDPGVDSNYVLLANMYAAVGKWDGAGK 439
P+ + S+L AC ++L R+ +Y+ L P + L+ +MYA G + A +
Sbjct: 300 PDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLI-DMYARCGCLEDAKR 358
Query: 440 IRRTMKGRGI 449
+ MK R +
Sbjct: 359 VFDRMKFRDV 368
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 5/147 (3%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H V F +N + L+ Y+ G AR VF + +R ++ +N +I + N
Sbjct: 54 VHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHL 113
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY- 355
+AL F M GF PD ++ L ACS + + GL+ + +++V + +
Sbjct: 114 YDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQ---LHGAVFKVGLDLNLFV 170
Query: 356 -GCIVDLYSRAGRLEDALNVVENMPMK 381
++ LY + G L +A V++ M K
Sbjct: 171 GNGLIALYGKCGCLPEARCVLDEMQSK 197
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 266/433 (61%), Gaps = 6/433 (1%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
E+ + + ++ G PNH TF + + A F S ++H + G + ++ T
Sbjct: 65 ESIVLYNLLSFDGIRPNHHTFNFIFAASASFSSARPL--RLLHSQFFRSGFESDSFCC-T 121
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
AL+ YAK G + A VFD M + WNAMI GY RRGD+++A+ +FD MP ++ S
Sbjct: 122 ALITAYAKLGALCCARRVFDEMSNRDVPVWNAMITGYQRRGDMKAAMELFDSMPNKNVTS 181
Query: 183 WTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
WT +++GF + G + EAL F M+ V+P+++T++SVL ACAN+G L IG + Y
Sbjct: 182 WTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHITLVSVLPACANLGELEIGRRLEGYA 241
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFVGEA 300
+ F DN+ V N +++YS+CG I+ A+++F + ++R L+SWNS+I A +G EA
Sbjct: 242 RENGFFDNIYVRNATLEMYSKCGMIDVAKRLFDEIGNQRNLISWNSMIGSLATHGKHDEA 301
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
LE + M +EG +PD V+F G L AC H G++ G M++++++SP++EHYGC++D
Sbjct: 302 LELYAQMLQEGERPDAVTFVGLLLACVHGGMVLKGKELLKSMEEVHKISPKLEHYGCMID 361
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
L R G+L++A ++++ MPMKP+ VV G+LL AC G++ +AE + L+ L+P N
Sbjct: 362 LLGRVGKLQEACDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALMKLEPTNPGN 421
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS-IEIGSGIHEFMAGDRSHIESEH 479
V+++N+YAA KWDG ++R+ MK + K G S +E G +H+F D+SH S
Sbjct: 422 CVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEAGVEVHKFTVEDKSHPRSYE 481
Query: 480 IYSMLELLSFDLK 492
IY +L+ +S +K
Sbjct: 482 IYQVLDEISRRMK 494
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 164/456 (35%), Positives = 262/456 (57%), Gaps = 4/456 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I+ G +A L F M + PN IT +++LS CA L G I
Sbjct: 239 VVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKID--LEFGRWI 296
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ G + +++ A+LDMY K G ++ A +F+ M K +W M+DG+ + G+
Sbjct: 297 CSYIENNGFTEH-LILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGN 355
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLN 223
+ A +FD MP + +W AL++ + + G AL F EMQ+S +PD VT+I L
Sbjct: 356 YDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALC 415
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
A A +G + G WIH Y+ K D N + +L+D+Y++CG + A +VF + ++ +
Sbjct: 416 ASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYV 475
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W+++I A+ G AL+ F+SM + KP+ V+FT L AC+HAGL+ +G + F+ M+
Sbjct: 476 WSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQME 535
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+Y + P+I+HY C+VD++ RAG LE A + +E MP+ P V G+LL AC G++ LA
Sbjct: 536 PLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELA 595
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E + L++L+P +VLL+N+YA G W+ +R+ M+ ++K+P SSI++
Sbjct: 596 ELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGI 655
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+HEF+ GD SH S+ IYS L+ +S K GY P+
Sbjct: 656 VHEFLVGDNSHPFSQKIYSKLDEISEKFKPIGYKPD 691
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 197/468 (42%), Gaps = 108/468 (23%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTN--PNHITFITLLSGCADFPSQCLFLGAMIH 105
W + I + S ++ L F M LH + PN TF L + + L LG+++H
Sbjct: 140 WNTLIRGYASSSDPTQSFLIFLHM-LHSCSEFPNKFTFPFLFKAASRL--KVLHLGSVLH 196
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G+V K L DL F N++I+ Y G
Sbjct: 197 GMVIKASLSS-------------------DL-------------FILNSLINFYGSSGAP 224
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A R+F MP +D +SW A++N F G ++AL F+EM++ V+P+ +T++SVL+AC
Sbjct: 225 DLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSAC 284
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS-- 283
A L G WI Y+ F +++ + N ++D+Y +CGCI A+ +F +M ++ +VS
Sbjct: 285 AKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWT 344
Query: 284 -----------------------------WNSIIVGFAVNGFVGEALEYFNSMQ-KEGFK 313
WN++I + NG AL F+ MQ + K
Sbjct: 345 TMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAK 404
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
PD V+ AL A + G I+ G + + K + ++ ++D+Y++ G L A+
Sbjct: 405 PDEVTLICALCASAQLGAIDFG-HWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAME 463
Query: 374 VVENMP----------------------------------MKPNEVVLGSLLAACRTKGD 399
V + +KPN V ++L AC G
Sbjct: 464 VFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGL 523
Query: 400 IILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
+ E+L M+ L + P + +YV + +++ G + A M
Sbjct: 524 VNEGEQLFEQMEPLYGIVPQIQ-HYVCVVDIFGRAGLLEKAASFIEKM 570
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE-PDYVTIISVLNACA 226
A +F+++P + W L+ G+ ++ F M S E P+ T + A +
Sbjct: 125 AKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAAS 184
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ L +G +H V+K ++ + N+LI+ Y G + A +VF M + +VSWN+
Sbjct: 185 RLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNA 244
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I FA+ G +AL F M+ + KP+ ++ L+AC+ +E G R+ +
Sbjct: 245 MINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFG-RWICSYIENN 303
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ + ++D+Y + G + DA ++ M K
Sbjct: 304 GFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEK 338
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 115/279 (41%), Gaps = 44/279 (15%)
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLY--SRCGCIE 267
G E + I+ ++ C N L IH ++L+ + + L+ Y S C C+
Sbjct: 67 GNEVESTNILEFIDQCTNTMQLK---QIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLI 123
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK-PDGVSFTGALTAC 326
+A+ VF ++ + L WN++I G+A + ++ F M + P+ +F A
Sbjct: 124 YAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAA 183
Query: 327 S-----HAGLIEDGL-----------------RYF------DIMKKIYRVSP--RIEHYG 356
S H G + G+ ++ D+ +++ P + +
Sbjct: 184 SRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWN 243
Query: 357 CIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
+++ ++ G + AL + + M M KPN + + S+L+AC K D+ + Y+
Sbjct: 244 AMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIE-- 301
Query: 414 DPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
+ G + +L + +MY G + A + M + I
Sbjct: 302 NNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDI 340
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 259/444 (58%), Gaps = 3/444 (0%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T + V WTS I ++G EA + F +M + T T+L C + + +
Sbjct: 308 TEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVC--LSQKDISI 365
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +H GLD ++V V AL+ MYAK G + A F+ M ++ +W AMI +
Sbjct: 366 GEQLHAHTITRGLD-SSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFS 424
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ GD+E A FD+MP R+ ISW ++L +++RGY+EE L+ + +M GV+ D++T +
Sbjct: 425 QAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFST 484
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
++ACA++ L +G I K F NV V N+++ +YSRCG IE A+++F + +
Sbjct: 485 SISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKN 544
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
LVSWN+++ G+A NG + +E F M G PD +S+ L+ CSH+G + +G YF
Sbjct: 545 LVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFL 604
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M K + +SP EH+ C+VDL RAG+LE A N++ MP KPN + G+LLAACR G+
Sbjct: 605 SMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNT 664
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
LAE +K L++LD +Y LLAN+Y+ GK G +R+ M+ +G++K PG S IE+
Sbjct: 665 KLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEV 724
Query: 461 GSGIHEFMAGDRSHIESEHIYSML 484
+ +H F D +H + + ++ ML
Sbjct: 725 DNRVHVFTVDDTNHPQIKDVHRML 748
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 200/424 (47%), Gaps = 32/424 (7%)
Query: 44 PTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC-----------A 91
P V W + IS SG++ EA F +M + +++ +++SG A
Sbjct: 68 PNVYSWNTMISGFADSGQMREAEKLFEKMP----ERDSVSWNSMMSGYFHNGELEATIKA 123
Query: 92 DFPSQCLFLGAMIHGLVCKL--GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS 149
L L +HG K G+D V T++LDMY K G MD A VF S
Sbjct: 124 SGSLGYLKLALQLHGFAEKFDFGID---TCVETSVLDMYIKCGAMDFAQKVFCRTPNPSL 180
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F WN+MI GY + G ++ A+ +F +MP RD +SW +++ + G+ E L F EM
Sbjct: 181 FCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQ 240
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G P+ +T SVL+AC ++ L G +H +++ + +V LID+Y++CG +E A
Sbjct: 241 GFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESA 300
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
RQVF + + VSW S+I G A GF EAL FN M++ D + L C
Sbjct: 301 RQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQ 360
Query: 330 GLIEDG--LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
I G L I + + P +V +Y++ G + A + E MP++ + +
Sbjct: 361 KDISIGEQLHAHTITRGLDSSVPVAN---ALVTMYAKCGDVWKANHAFELMPIR-DIISW 416
Query: 388 GSLLAACRTKGDIILAERLMKYLVDL-DPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKG 446
+++ A GD+ E+ +Y + + V S +LA Y G W+ K+ M
Sbjct: 417 TAMITAFSQAGDV---EKAREYFDKMPERNVISWNSMLAT-YMQRGYWEEGLKVYIQMLR 472
Query: 447 RGIQ 450
G++
Sbjct: 473 EGVK 476
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 177/388 (45%), Gaps = 71/388 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV W + IS + G AE F M G PN +T+ ++LS C L GA +
Sbjct: 211 TVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYD--LEWGAHL 268
Query: 105 HGLVCKLG--LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
H + ++ LD V G L+DMYAK GR+
Sbjct: 269 HARIVRMEPCLD---VYAGCGLIDMYAKCGRL---------------------------- 297
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
ESA ++FD + +A+SWT+L+ G + G+ EEAL F +M+ V D T+ +VL
Sbjct: 298 ---ESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVL 354
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC------------------- 263
C + + IG +H + + + +V V N L+ +Y++C
Sbjct: 355 GVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDII 414
Query: 264 ------------GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
G +E AR+ F +M +R ++SWNS++ + G+ E L+ + M +EG
Sbjct: 415 SWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREG 474
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
K D ++F+ +++AC+ ++ G + +K+ S + +V +YSR G++E+A
Sbjct: 475 VKTDWITFSTSISACADLAVLILGNQILAQAEKL-GFSSNVSVANSVVTMYSRCGQIEEA 533
Query: 372 LNVVENMPMKPNEVVLGSLLAACRTKGD 399
+ ++ MK N V +++A G
Sbjct: 534 QKMFSSIVMK-NLVSWNAMMAGYAQNGQ 560
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 190/420 (45%), Gaps = 100/420 (23%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
F + CA S + + +H + +GL ++++ + LL+MY+ G + A VF
Sbjct: 7 FYESMKECASLRS--IPIARKLHAQLIFMGL-KSSIFLQNHLLNMYSNCGLISDAYRVFG 63
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
+ + ++WN MI G+ G + A ++F++MP RD++SW ++++G+ G E
Sbjct: 64 GIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELE----- 118
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
+ + A ++G L + L +H + K DF + V +++D+Y +
Sbjct: 119 -----------------ATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIK 161
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK------------- 309
CG ++FA++VF R +L WNS+I G++ G V +ALE F M +
Sbjct: 162 CGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISIL 221
Query: 310 ------------------EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR 351
+GF+P+ +++ L+AC+ +E G + +I R+ P
Sbjct: 222 SQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAH---LHARIVRMEPC 278
Query: 352 IEHY-GC-IVDLYSRAGRLEDA----------------------------------LNVV 375
++ Y GC ++D+Y++ GRLE A N +
Sbjct: 279 LDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQM 338
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVG 432
+P+ ++ L ++L C ++ DI + E+L + + G+DS+ + L MYA G
Sbjct: 339 REVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTI--TRGLDSSVPVANALVTMYAKCG 396
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 174/443 (39%), Positives = 255/443 (57%), Gaps = 35/443 (7%)
Query: 58 SGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNN 117
S R+ A+ F M T PN TF LL CA FP +G H K G +
Sbjct: 125 SARLRAASF-FPLMLRSATLPNKFTFPFLLKACAAFPG----VGVQAHAAALKFGFTTDQ 179
Query: 118 VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV 177
+ T L+ MY+ FG L GD A +FD M
Sbjct: 180 YVSNT-LIHMYSCFGGEFL--------------------------GD---ARNVFDRMAK 209
Query: 178 RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWI 237
A++W+A++ G+V+ G +A+ FREMQ SGV PD VT+I VL A A++G L + W+
Sbjct: 210 SSAVTWSAMIGGYVRSGLSSDAVGLFREMQASGVRPDEVTMIGVLAAAADLGALELARWV 269
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
R+V K+ +V +CN LID ++CG ++ A VFQ M +RT+VSW S+I A+ G
Sbjct: 270 GRFVEKEGIGKSVTLCNALIDALAKCGDLDGAMAVFQGMKERTIVSWTSVIDALAMEGRG 329
Query: 298 GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC 357
EA+ F M+ G +PD V+F G LTACSHAG++++G YF+ M+ Y + P+IEHYGC
Sbjct: 330 KEAVAVFEEMKTAGVRPDDVAFIGVLTACSHAGMVDEGYGYFESMRMAYGIDPKIEHYGC 389
Query: 358 IVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGV 417
+VD++ RAG +E A+ V MPMKPN ++ +L+AACR G + L E + + L++ P
Sbjct: 390 MVDMFGRAGMVERAMEFVHKMPMKPNPIIWRTLVAACRAHGRLELGETITRNLLNEYPAH 449
Query: 418 DSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIES 477
++NYV+L+N+YA +W +IRR M RGI+K PG S +E+ +HEF+AGD SH +
Sbjct: 450 EANYVMLSNVYALTRRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQW 509
Query: 478 EHIYSMLELLSFDLKLCGYVPET 500
+ IY M+E ++ +L+ G++ T
Sbjct: 510 KEIYMMVEEMARELRRAGHISAT 532
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 36/253 (14%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I + RSG ++A F M G P+ +T I +L+ A L L +
Sbjct: 212 AVTWSAMIGGYVRSGLSSDAVGLFREMQASGVRPDEVTMIGVLA--AAADLGALELARWV 269
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
V K G+ ++ V + AL+D AK G +D A VF M+ ++ +W ++ID G
Sbjct: 270 GRFVEKEGIGKS-VTLCNALIDALAKCGDLDGAMAVFQGMKERTIVSWTSVIDALAMEG- 327
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
RG +EA+ F EM+ +GV PD V I VL A
Sbjct: 328 ----------------------------RG--KEAVAVFEEMKTAGVRPDDVAFIGVLTA 357
Query: 225 CANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLV 282
C++ G + G + + ++ ++D++ R G +E A + +M K +
Sbjct: 358 CSHAGMVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGMVERAMEFVHKMPMKPNPI 417
Query: 283 SWNSIIVGFAVNG 295
W +++ +G
Sbjct: 418 IWRTLVAACRAHG 430
>gi|242042383|ref|XP_002468586.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
gi|241922440|gb|EER95584.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
Length = 581
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 167/429 (38%), Positives = 256/429 (59%), Gaps = 14/429 (3%)
Query: 77 NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
+P+H TF +L G +Q L L A +H L+ KLG + ALL Y R DL
Sbjct: 103 HPDHFTFPRILPG-----AQPLHLVAQLHALLLKLGF-HAHTQSLNALLAAYLANARPDL 156
Query: 137 ATVVF-----DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
A+ VF DA+ V S W M+ G ++ G ++ A +FD MP R+ +SW A+++G+V
Sbjct: 157 ASRVFRGGGGDALDVVS---WTTMVGGLVKLGRVDDARELFDGMPERNLVSWNAMMSGYV 213
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
K G F +ALE F EM+ GV+ + + + AC G L G +HR+V + + + K
Sbjct: 214 KTGRFLDALEVFDEMRARGVDGNAFVAATAVVACTGAGALARGREVHRWVERSGIEMDDK 273
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
+ ++D+Y +CGC+E A +VF+ + R L SWN +I GFAV+G +AL F M++EG
Sbjct: 274 LATAVVDMYCKCGCVEEAWRVFEALPARGLTSWNCMIGGFAVHGRGEDALNLFGLMEREG 333
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
PD V+ LTAC+HAG++ +G YF+ + + Y + P++EHYGC+VDLY RAG+LE+A
Sbjct: 334 VAPDDVTLVNVLTACAHAGMVSEGRHYFNYISQRYGIVPKMEHYGCMVDLYGRAGQLEEA 393
Query: 372 LNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAV 431
V+++MPM+P+ VLG+L A + GD+ L E + +++LDP YVLLAN+ A
Sbjct: 394 KKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLATA 453
Query: 432 GKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
G+W+ ++RR M R + K+ G S IE+ + EF G H ++E +Y+M + +
Sbjct: 454 GRWEDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGLCHPQAEEVYAMARDMMRKI 513
Query: 492 KLCGYVPET 500
+ GYVP+T
Sbjct: 514 RAEGYVPDT 522
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 35/232 (15%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + +S + ++GR +A F M G + N T + C + L G +H
Sbjct: 203 VSWNAMMSGYVKTGRFLDALEVFDEMRARGVDGNAFVAATAVVACTG--AGALARGREVH 260
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + G++ ++ + TA++DMY K G ++ A VF+A+ + +WN MI
Sbjct: 261 RWVERSGIEMDDKLA-TAVVDMYCKCGCVEEAWRVFEALPARGLTSWNCMI--------- 310
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
GF G E+AL F M+ GV PD VT+++VL AC
Sbjct: 311 ----------------------GGFAVHGRGEDALNLFGLMEREGVAPDDVTLVNVLTAC 348
Query: 226 ANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
A+ G + G Y+ ++ ++ ++DLY R G +E A++V Q M
Sbjct: 349 AHAGMVSEGRHYFNYISQRYGIVPKMEHYGCMVDLYGRAGQLEEAKKVIQDM 400
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 164/445 (36%), Positives = 263/445 (59%), Gaps = 3/445 (0%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I RS A F M P +T+ ++ A + + GA +HG
Sbjct: 92 WNTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYPSVFKAYAQLGAG--YDGAQLHGR 149
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLGL+++ + T ++ MYA G + A VFD + N+MI G + G+++
Sbjct: 150 VVKLGLEKDQFIQNT-IIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLAKCGEVDK 208
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+ R+FD MP R ++W ++++G+V+ EALE FR+MQ VEP T++S+L+ACA+
Sbjct: 209 SRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVEPSEFTMVSLLSACAH 268
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G L G W+H YV + F+ NV V +ID+Y +CG I A +VF+ R L WNSI
Sbjct: 269 LGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPTRGLSCWNSI 328
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I+G A+NG+ +A+EYF+ ++ KPD VSF G LTAC + G + YF +M Y
Sbjct: 329 IIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYFSLMMNKYE 388
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ P I+HY C+V++ +A LE+A +++ MP+K + ++ GSLL++CR G++ +A+R
Sbjct: 389 IEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSSCRKHGNVEIAKRAA 448
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
+ + +L+P S Y+L++N+ AA +++ A + R M+ R +K+PG SSIE+ +HEF
Sbjct: 449 QRVCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEPGCSSIELYGEVHEF 508
Query: 468 MAGDRSHIESEHIYSMLELLSFDLK 492
+AG R H ++ IY +L SF L+
Sbjct: 509 LAGGRLHPKAREIYYLLNDSSFALQ 533
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 36/261 (13%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GDI A +F +P + W ++ GF + A+ F +M S V P +T SV
Sbjct: 72 GDINYAYLLFTTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYPSVF 131
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLY---------------------- 260
A A +G G +H V+K + + + NT+I +Y
Sbjct: 132 KAYAQLGAGYDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVV 191
Query: 261 ---------SRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
++CG ++ +R++F M RT V+WNS+I G+ N + EALE F MQ E
Sbjct: 192 ACNSMIMGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGER 251
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
+P + L+AC+H G ++ G D +K+ + + I+D+Y + G + A
Sbjct: 252 VEPSEFTMVSLLSACAHLGALKHGEWVHDYVKRGH-FELNVIVLTAIIDMYCKCGVIVKA 310
Query: 372 LNVVENMPMKP----NEVVLG 388
+ V E P + N +++G
Sbjct: 311 IEVFEASPTRGLSCWNSIIIG 331
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 120/262 (45%), Gaps = 52/262 (19%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S IS + R+ R+ EA F +M P+ T ++LLS CA LGA+ H
Sbjct: 222 VTWNSMISGYVRNKRLMEALELFRKMQGERVEPSEFTMVSLLSACAH-------LGALKH 274
Query: 106 GL----VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
G K G NV+V TA++DMY K G + A VF+A + WN++I G
Sbjct: 275 GEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPTRGLSCWNSIIIGLA- 333
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
LNG+ ++ A+E F +++ S ++PD+V+ I V
Sbjct: 334 -------------------------LNGYERK-----AIEYFSKLEASDLKPDHVSFIGV 363
Query: 222 LNACANVGTLG-----IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
L AC +G +G L +++Y + + ++K ++++ + +E A Q+ + M
Sbjct: 364 LTACKYIGAVGKARDYFSLMMNKY----EIEPSIKHYTCMVEVLGQAALLEEAEQLIKGM 419
Query: 277 H-KRTLVSWNSIIVGFAVNGFV 297
K + W S++ +G V
Sbjct: 420 PLKADFIIWGSLLSSCRKHGNV 441
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 179/525 (34%), Positives = 283/525 (53%), Gaps = 72/525 (13%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I + EA + M L G P+ +TF++LL+ + + L LG +H
Sbjct: 114 VSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTN--PELLQLGQKVH 171
Query: 106 -------------------GLVCKLG-----------LDRNNVMVGTALLDMYAKFGRMD 135
G+ K G L NV+ T L+ YA+ G++D
Sbjct: 172 MEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVD 231
Query: 136 LATVVFDAMR----------------------------------VKSSF---TW--NAMI 156
+A + + M+ ++S + W N++I
Sbjct: 232 VALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLI 291
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
Y + G +E A ++F ++P RD ++WTA++ G+ + G+ +EA+ FR MQ G++PD +
Sbjct: 292 TMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKM 351
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T SVL +C++ L G IH+ ++ + +V + + L+ +Y++CG ++ A VF +M
Sbjct: 352 TFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQM 411
Query: 277 HKRTLVSWNSIIVGF-AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+R +V+W +II G A +G EALEYF+ M+K+G KPD V+FT L+AC+H GL+E+G
Sbjct: 412 SERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEG 471
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
++F M Y + P +EHY C VDL RAG LE+A NV+ +MP P V G+LL+ACR
Sbjct: 472 RKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACR 531
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
D+ ER + ++ LDP D YV L+++YAA G+++ A K+R+ M+ R + K+PG
Sbjct: 532 VHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQ 591
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
S IE+ +H F D+SH ESE IY L L+ +K GYVP+T
Sbjct: 592 SWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDT 636
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 197/450 (43%), Gaps = 90/450 (20%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T+ + +S C++GR+ EA M L GT F LL CA S L G +
Sbjct: 12 TLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRS--LEQGREV 69
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K G+ N + T LL MYAK G
Sbjct: 70 HAAILKSGIQPNRYLENT-LLSMYAKCG-------------------------------S 97
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A R+FD + R+ +SWTA++ FV EA +C+ M+++G +PD VT +S+LNA
Sbjct: 98 LTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNA 157
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
N L +G +H +++ + +V +L+ +Y++CG I AR +F R+ ++ +V+W
Sbjct: 158 FTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTW 217
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+I G+A G V ALE +MQ+ P+ ++F L C+ +E G KK
Sbjct: 218 TLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHG-------KK 270
Query: 345 IYRVSPRIEHYG-------CIVDLYSRAGRLEDALNVVENMP------------------ 379
++R + YG ++ +Y + G LE+A + ++P
Sbjct: 271 VHRYIIQ-SGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLG 329
Query: 380 ----------------MKPNEVVLGSLLAACRTKGDIILAERLMKYLV----DLDPGVDS 419
+KP+++ S+L +C + + +R+ + LV +LD + S
Sbjct: 330 FHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQS 389
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
L +MYA G D A + M R +
Sbjct: 390 A---LVSMYAKCGSMDDASLVFNQMSERNV 416
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 240/419 (57%), Gaps = 3/419 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W + I +A + F M PN+ T+ L C D + L+LG
Sbjct: 76 TFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACTDLNN--LYLGLAC 133
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H KLG + + V L+ M+A FG MD A +FD + TW A+I+GY+R G
Sbjct: 134 HCQSIKLGWEFYD-FVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTALINGYVRAGQ 192
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ +FD+MP R+++SW+A++ G+V+ G+FEEALE F M ISG P++ I+ +NA
Sbjct: 193 VLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPNHAGIVCAINA 252
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L G WIH Y+ + + + LID+Y++CGCIE A +F + R + +
Sbjct: 253 CASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSIFGELRNRDVHVY 312
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+I G A +G A+E F M EG P+ V+F L ACS GL++ GLR F+ M K
Sbjct: 313 TCLISGLANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRMGLVDKGLRIFENMSK 372
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
IY P+++HYGC+VDL RAG+LE+A +V+ MPMKP+ VLG+LL A R GD+ L E
Sbjct: 373 IYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGALLNASRVYGDVELGE 432
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
++ L L +V+L+NMYA+ KWD ++RR M + ++K PG S I++ G
Sbjct: 433 ETVESLAQLSLDHSGVHVVLSNMYASANKWDEVARVRRGMGDKKVRKVPGCSLIKVDGG 491
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 144/350 (41%), Gaps = 74/350 (21%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A R+F + R W ++ F ++ +A+ F+ M S P+ T + A
Sbjct: 61 LSHAYRLFLGLRHRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKA 120
Query: 225 CANVGTLGIGLWIHRYVLK--QDFKDNVKVCNTLIDLYSRCGCIEFA------------- 269
C ++ L +GL H +K +F D V+ N L+ +++ GC++ A
Sbjct: 121 CTDLNNLYLGLACHCQSIKLGWEFYDFVQ--NGLVHMFAIFGCMDSARKLFDLSSNRDVI 178
Query: 270 ------------------RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
R++F +M +R VSW+++I G+ GF EALE FN+M G
Sbjct: 179 TWTALINGYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISG 238
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE-- 369
F P+ A+ AC+ G ++ G R+ K R+ ++D+Y++ G +E
Sbjct: 239 FWPNHAGIVCAINACASLGALDQG-RWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIA 297
Query: 370 -----------------------------DALNVVENMPMK---PNEVVLGSLLAACRTK 397
A+ + E M + PNEV S+L AC
Sbjct: 298 CSIFGELRNRDVHVYTCLISGLANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRM 357
Query: 398 GDIILAERLMKYLVDL---DPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
G + R+ + + + +P V +Y L ++ GK + A K+ + M
Sbjct: 358 GLVDKGLRIFENMSKIYGDEPQVQ-HYGCLVDLLGRAGKLEEAKKLVKEM 406
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 166/462 (35%), Positives = 258/462 (55%), Gaps = 34/462 (7%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K ++ V WT+ I+ + G+ A F RM +PN TF ++SGCA+ +
Sbjct: 277 KMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLAR--I 334
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G +H L+ LGL ++ V +++ MYAK G++ ++V+
Sbjct: 335 EWGEQLHALILHLGL-AASLSVENSIMTMYAKCGQLTSSSVI------------------ 375
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
F EM RD +SW+ ++ G+ + G+ EA E M++ G +P +
Sbjct: 376 -------------FHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFAL 422
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
SVL+AC N+ L G +H YVL + V + LI++Y +CG IE A ++F
Sbjct: 423 ASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAEN 482
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+VSW ++I G+A +G+ E ++ F + + G +PD V+F G L+ACSHAGL++ G RY
Sbjct: 483 DDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRY 542
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F+ M K Y++SP EHYGC++DL RAGRL DA +++E MP ++VV +LL ACR G
Sbjct: 543 FNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHG 602
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
D+ R + ++ L+P ++ LAN+YA+ GKW A IR+ MK +G+ K+PG S I
Sbjct: 603 DVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWI 662
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
++ + F+AGDRSH + E IY+ML+LL+ +L V ET
Sbjct: 663 KVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQET 704
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 211/479 (44%), Gaps = 78/479 (16%)
Query: 2 NSSATATILPQPFLPHQQNPNQNLTTTPQI-SIQTNNSKSTVNPTVQWTSSISRHCRSGR 60
N S + Q LP + L T + + + K + + WT+ IS + +
Sbjct: 36 NLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNAND 95
Query: 61 IAEAALEFTRMTLHG---TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNN 117
+EA L F M + +P FI L+ A + + G ++HG K GL N+
Sbjct: 96 SSEALLLFKNMRVESGLRIDP----FILSLAHKACGLNSDVNYGELLHGYAVKTGL-VNS 150
Query: 118 VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV 177
V VG+ALLDM Y + G I R+F EMP+
Sbjct: 151 VFVGSALLDM-------------------------------YTKNGKIFEGRRVFHEMPM 179
Query: 178 RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWI 237
R+ +SWTA++ G V+ GY +EAL F EM S VE D T L ACA+ G L G I
Sbjct: 180 RNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREI 239
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
H +K+ F + V NTL +Y++CG +E+ +F++M R +VSW +II G
Sbjct: 240 HAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQE 299
Query: 298 GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI------------ 345
A++ F M++ P+ +F ++ C++ IE G + ++ +
Sbjct: 300 ECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSI 359
Query: 346 -----------------YRVSPR-IEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNE 384
+ ++ R I + I+ YS+ G + +A ++ M M KP E
Sbjct: 360 MTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTE 419
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLA---NMYAAVGKWDGAGKI 440
L S+L+AC + ++L Y++ + G++ ++L+ NMY G + A +I
Sbjct: 420 FALASVLSACGNMAILEHGKQLHAYVLSI--GLEHTAMVLSALINMYCKCGSIEEASRI 476
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 157/335 (46%), Gaps = 43/335 (12%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I+ R+G EA + F+ M + TF L CAD S L G IH
Sbjct: 183 VSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACAD--SGALNYGREIH 240
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
K G D SSF N + Y + G +
Sbjct: 241 AQAMKKGFD--------------------------------VSSFVANTLATMYNKCGKL 268
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E + +F++M +RD +SWT ++ V+ G E A++ F M+ S V P+ T +V++ C
Sbjct: 269 EYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGC 328
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN+ + G +H +L ++ V N+++ +Y++CG + + +F M +R +VSW+
Sbjct: 329 ANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWS 388
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+II G++ G V EA E + M+ EG KP + L+AC + ++E G +
Sbjct: 389 TIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQL-----HA 443
Query: 346 YRVSPRIEH----YGCIVDLYSRAGRLEDALNVVE 376
Y +S +EH ++++Y + G +E+A + +
Sbjct: 444 YVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFD 478
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 245/398 (61%), Gaps = 11/398 (2%)
Query: 115 RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDE 174
+ +V++ ++ Y + G M A +FD M + +WN ++ GY G++ES V++F+E
Sbjct: 216 QRDVVLWNVVVSGYIELGDMVAARELFDRMPDRDVMSWNTVLSGYATNGEVESFVKLFEE 275
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQI-----------SGVEPDYVTIISVLN 223
MPVR+ SW L+ G+V+ G F+EALECF+ M + V P+ T+++VL
Sbjct: 276 MPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLT 335
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
AC+ +G L +G W+H Y +K N+ V N LID+Y++CG IE A VF + + +++
Sbjct: 336 ACSRLGDLEMGKWVHVYAESIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIIT 395
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN+II G A++G V +AL F M++ G +PDGV+F G L+AC+H GL+ +GL +F M
Sbjct: 396 WNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFVGILSACTHMGLVRNGLLHFQSMV 455
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
Y + P+IEHYGC+VDL RAG ++ A+++V MPM+P+ V+ +LL ACR ++ +A
Sbjct: 456 DDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIVRKMPMEPDAVIWAALLGACRMYKNVEMA 515
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E ++ L++L+P N+V+++N+Y +G+ +++ M+ G +K PG S I
Sbjct: 516 ELALQRLIELEPNNPGNFVMVSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVIGCNDS 575
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
+ EF + D H E++ IY L+ L+ L+ GYVP V
Sbjct: 576 MVEFYSLDERHPETDSIYRALQGLTILLRSHGYVPNLV 613
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 129/331 (38%), Gaps = 65/331 (19%)
Query: 154 AMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEP 213
+ I R G I A R+FD+ + +W A+ G+ + + + F M +G P
Sbjct: 59 SFITACARLGGIRRARRVFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASP 118
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS------------ 261
+ T V+ +CA G +H V K+ FK N V LI +YS
Sbjct: 119 NCFTFPMVVKSCATANAAKEGEEVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYK 178
Query: 262 ---------------------RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
C + AR++F +R +V WN ++ G+ G + A
Sbjct: 179 VFAEMRDKNVFAWTAIVAAHVACRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAA 238
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KKIYRVSPRIEHYGCI 358
E F+ M D +S+ L+ + G +E ++ F+ M + +Y + +
Sbjct: 239 RELFDRMPDR----DVMSWNTVLSGYATNGEVESFVKLFEEMPVRNVY-------SWNGL 287
Query: 359 VDLYSRAGRLEDALNVVENM--------------PMKPNEVVLGSLLAACRTKGDIILAE 404
+ Y R G ++AL + M + PN+ + ++L AC GD+ + +
Sbjct: 288 IGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGK 347
Query: 405 RLMKYLVDLDPGVDSNYVL---LANMYAAVG 432
+ Y + G N + L +MYA G
Sbjct: 348 WVHVYAESI--GYKGNLFVGNALIDMYAKCG 376
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 24/231 (10%)
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
VE +++++ C + I ++ + N V + I +R G I AR
Sbjct: 21 VEDKFISLLRTCGTCVRLHQ------IQAQIVTHGLEGNDYVTPSFITACARLGGIRRAR 74
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
+VF + + +WN++ G+A + + F M + G P+ +F + +C+ A
Sbjct: 75 RVFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASPNCFTFPMVVKSCATAN 134
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGC-IVDLYSRAGR--LEDALNVVENMPMKPNEVVL 387
++G ++ K R GC ++ +YS G + DA V M K N
Sbjct: 135 AAKEGEEVHCVVAK--RGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDK-NVFAW 191
Query: 388 GSLLAACRTKGDIILAERLMKYLVDLDPGVD--------SNYVLLANMYAA 430
+++AA D++ A RL DL P D S Y+ L +M AA
Sbjct: 192 TAIVAAHVACRDMVSARRLF----DLAPQRDVVLWNVVVSGYIELGDMVAA 238
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 34/147 (23%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V + W + I+ G +A+A F RM G P+ +TF+ +LS C
Sbjct: 390 VKDIITWNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFVGILSACT---------- 439
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+GL RN ++ +++D Y+ +++ + M+D R
Sbjct: 440 --------HMGLVRNGLLHFQSMVDDYSIVPQIE---------------HYGCMVDLLGR 476
Query: 162 RGDIESAVRMFDEMPVR-DAISWTALL 187
G I+ AV + +MP+ DA+ W ALL
Sbjct: 477 AGLIDKAVDIVRKMPMEPDAVIWAALL 503
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/460 (37%), Positives = 265/460 (57%), Gaps = 25/460 (5%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGA---- 102
+T+ I+ + A L + M G PN+ + +L C D LG+
Sbjct: 110 YTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDV------LGSNATK 163
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGR-MDLATVVFDAMRVKSSFTWNAMIDGYMR 161
M+H V K G V V TA++D Y++F + A +FD M ++ +W AMI GY R
Sbjct: 164 MVHTQVLKSGFGGYPV-VQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYAR 222
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE--------- 212
G+ +SA+ +F+ MP RD +W AL+ G + G+F EA+ F+ M + +E
Sbjct: 223 LGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNNDRENK 282
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P+ T+ S L+AC + G L +G WIH YV K + + N L+D+Y +CG ++ AR+V
Sbjct: 283 PNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRV 342
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK--EGFKPDGVSFTGALTACSHAG 330
F + + L SWNS+I A++G G A++ F + +G KP+ V+F G L AC+H G
Sbjct: 343 FDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGG 402
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
L+E G YF++M++ Y + P+IEH+GC++DL RAGR E+A+ VV M ++P+EVV GSL
Sbjct: 403 LVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSL 462
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
L AC+ G LAE +K L+++DP ++LAN+YA GKWD K+RR +K +
Sbjct: 463 LNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAY 522
Query: 451 KKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE-LLSF 489
K PG S IE+ + +++F + D SH E IY LE ++SF
Sbjct: 523 KTPGCSWIEVDNQVYQFYSFDMSHPSVEEIYKTLESMISF 562
>gi|359492783|ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
[Vitis vinifera]
Length = 575
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 166/429 (38%), Positives = 259/429 (60%), Gaps = 20/429 (4%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA---DFPSQCLFLG 101
V W + I + +G A L F +M++ +T+I ++ G A D + F
Sbjct: 160 AVTWNAMICGYLGNGDSKSAVLLFEKMSIRTA----VTWIEMIDGFARSGDTETARRFFD 215
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ L NV+ T ++D YA+ M+ A VF+ M ++ F W++MI GY +
Sbjct: 216 DVPSEL--------RNVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISGYCK 267
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+G+++ A +FD +PVR+ ++W +L++G+ + G+ EEALE F +MQ G EPD VTI SV
Sbjct: 268 KGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASV 327
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+AC+ +G L G IH + + K N V N L+D+Y++CG + AR +F+ M R
Sbjct: 328 LSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRNR 387
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
WNS+I GFA++G EALE+F M+ PD ++F L+AC+H G + GL F
Sbjct: 388 ACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEIFSR 447
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M+K Y ++ I+HYGC++DL RAGR+++A ++++ MP+KPN+VV G+LL ACR D+
Sbjct: 448 MEK-YGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVVWGALLGACRVHLDME 506
Query: 402 LAERLMKYLVDLD----PGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
+A+R+++ +V +D G DS+YVLL+N+YAA +W+ A K+R M +G QK G SS
Sbjct: 507 MADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMRMEMANKGFQKTSGCSS 566
Query: 458 IEIGSGIHE 466
I G+ HE
Sbjct: 567 IMPGNNTHE 575
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 206/419 (49%), Gaps = 15/419 (3%)
Query: 2 NSSATATILPQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTV-QWTSSISRHCRSGR 60
NS T + P+P Q + Q+ + + ++ P++ W I + G
Sbjct: 16 NSRDTRSPRPKPQNERQNHQTQSPSLPKSLKQGSDFCPGKGTPSLSNWCHLIRSYLSQGA 75
Query: 61 IAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMV 120
EA L +T + G + + +L CA + G +H K G+D + VM+
Sbjct: 76 PREALLVYTGLRRKGVYLLGVAPL-VLKACASL--SIVKHGKALHAESIKNGVDFD-VMI 131
Query: 121 GTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDA 180
GT+L+ MYAK G + + VFD M +++ TWNAMI GY+ GD +SAV +F++M +R A
Sbjct: 132 GTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTA 191
Query: 181 ISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
++W +++GF + G E A F + + + VT +++ A + R
Sbjct: 192 VTWIEMIDGFARSGDTETARRFFDD--VPSELRNVVTWTVMVDGYARNAEMEAA----RE 245
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
V + + N +++I Y + G ++ AR +F R+ R LV+WNS+I G+A NGF EA
Sbjct: 246 VFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEA 305
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK-KIYRVSPRIEHYGCIV 359
LE F MQ EGF+PD V+ L+ACS GL++ G + +M K +++ + +V
Sbjct: 306 LEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFV--LNGLV 363
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD 418
D+Y++ G L +A + E M + N S+++ G A + D G D
Sbjct: 364 DMYAKCGDLANARLIFEGMAHR-NRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPD 421
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/425 (38%), Positives = 255/425 (60%), Gaps = 4/425 (0%)
Query: 77 NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
P+H + TLL CA S L LG +H ++V V ++L+DMYAK G +
Sbjct: 101 QPDHFVYATLLKACASLCS--LRLGKQVHARFVLSPFVDDDV-VKSSLVDMYAKCGLPSI 157
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A VFD++ VK+S +W AM+ GY R G + A+ +F PVR+ SWTAL++G V+ GY
Sbjct: 158 ARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYC 217
Query: 197 EEALECFREMQISGVE-PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
+ F EM+ GV+ D + + SV+ ACAN+ LG+G IH V+ ++ + + N
Sbjct: 218 IDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNA 277
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
L+D+Y++C I AR VF RM R +VSW SIIVG A +G EAL+ ++ M KP+
Sbjct: 278 LVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPN 337
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V+F G + ACSHAGL+ G + F M + YR+SP ++ + C +DL SR+G L +A +++
Sbjct: 338 EVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLI 397
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
+ MP KP+E +LL+AC+ G+ + R+ L+ L+ S YVLL+N+YA GKW+
Sbjct: 398 KTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWE 457
Query: 436 GAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCG 495
++R+ M +++KPG SSI++G F AG+ H + I+ +L+ L +++ G
Sbjct: 458 QMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHPMKDEIFGLLKELDAEMRKRG 517
Query: 496 YVPET 500
Y+P+T
Sbjct: 518 YIPDT 522
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 101/193 (52%), Gaps = 5/193 (2%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-V 211
N ++D Y + ++ A +FDEMP RD +SW ++L + + + L F M + +
Sbjct: 41 NTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRL 100
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
+PD+ ++L ACA++ +L +G +H + F D+ V ++L+D+Y++CG AR
Sbjct: 101 QPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARS 160
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
VF + +T VSW +++ G+A +G EA+E F S+T ++ +G
Sbjct: 161 VFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNL----YSWTALISGLVQSGY 216
Query: 332 IEDGLRYFDIMKK 344
DG F M++
Sbjct: 217 CIDGCYMFIEMRR 229
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 156/343 (45%), Gaps = 49/343 (14%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V +V WT+ +S + RSG EA F R + N ++ L+SG S G
Sbjct: 167 VKTSVSWTAMLSGYARSGLKDEAMELFLRTPVR----NLYSWTALISGLVQ--SGYCIDG 220
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLAT----VVFDAMRVKSSFTWNAMID 157
+ + + G+D + +V ++++ A + L +V + F NA++D
Sbjct: 221 CYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVD 280
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
Y + DI +A +F+ M RD +SWT+++ G + G +EAL+ + +M ++ ++P+ VT
Sbjct: 281 MYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVT 340
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFK--DNVKVCNTLIDLYSRCGCIEFARQVFQR 275
+ ++ AC++ G + G + + ++ +D++ ++++ +DL SR
Sbjct: 341 FVGLIYACSHAGLVSKGRKLFKAMI-EDYRISPSLQLFTCFLDLLSR------------- 386
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+G + EA + +M KPD ++ L+AC H G E G
Sbjct: 387 ------------------SGHLNEAEDLIKTMPH---KPDEPTWAALLSACKHHGNTEMG 425
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+R D + + P Y + ++Y+ AG+ E V + M
Sbjct: 426 VRIADRLLSLNMHEPST--YVLLSNVYAGAGKWEQMSRVRKLM 466
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
IH ++K + NTL+D Y +C ++ A +F M +R VSW SI+ +
Sbjct: 24 IHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQAKL 83
Query: 297 VGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH- 354
+ L F+ M + +PD + L AC A L LR + + +SP ++
Sbjct: 84 PNKTLSIFHYMFTTDRLQPDHFVYATLLKAC--ASLC--SLRLGKQVHARFVLSPFVDDD 139
Query: 355 --YGCIVDLYSRAGRLEDALNVVENMPMK 381
+VD+Y++ G A +V +++ +K
Sbjct: 140 VVKSSLVDMYAKCGLPSIARSVFDSILVK 168
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/445 (37%), Positives = 260/445 (58%), Gaps = 25/445 (5%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ ++ + +L CA + G +HG+ + G ++ VG AL+DMYAK G +D A
Sbjct: 11 PDVVSLVNVLPACASMGA--WLHGKAVHGIAVRSG-SFEDLFVGNALVDMYAKCGMVDEA 67
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD----AISWTALLNGFVKR 193
+ VFD ++ K +WNAM++GY + G E A+ +F++M + +SW+A++ F +R
Sbjct: 68 SKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQR 127
Query: 194 GYFEEALECFREMQISG-----------------VEPDYVTIISVLNACANVGTLGIGLW 236
G E L+ FREMQ V+P+ TI L ACA + L +G
Sbjct: 128 GLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQ 187
Query: 237 IHRYVLKQDFKDN-VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
IH Y+L+ F + V N LID+Y++ G I+ AR VF + ++ VSW S++ G+ ++G
Sbjct: 188 IHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHG 247
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
EALE F+ M++ G +PDGV+ L ACSH+G+I+ G+ +F+ M K + V P EHY
Sbjct: 248 RGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHY 307
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
C+VDL RAGRL +A+ ++E M M+P+ +V +LL+ CR ++ L E K L++L+
Sbjct: 308 ACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNS 367
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
D +Y LL+N+YA +W ++R MK GI+K+PG S ++ G F D++H
Sbjct: 368 ENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHP 427
Query: 476 ESEHIYSMLELLSFDLKLCGYVPET 500
+S+ IY +L L+ +K+ GYVPET
Sbjct: 428 QSKQIYEILRSLTQRIKVLGYVPET 452
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 128/264 (48%), Gaps = 35/264 (13%)
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
+ PD V++++VL ACA++G G +H ++ +++ V N L+D+Y++CG ++ A
Sbjct: 9 MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEAS 68
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
+VF R+ ++ +VSWN+++ G++ G +AL F M++E + + VS++ + A + G
Sbjct: 69 KVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG 128
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM-----PMKPNEV 385
L G D+ +++ + G DAL + M +KPN
Sbjct: 129 L---GCETLDVFREM------------------QHGEANDALELFSWMFKQDGLVKPNCF 167
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN----MYAAVGKWDGAGKIR 441
+ L AC + L ++ Y+ L DS ++ +AN MYA G D A +
Sbjct: 168 TISCALIACARLAALRLGRQIHAYI--LRNHFDSAFLYVANCLIDMYAKSGDIDVARFVF 225
Query: 442 RTMKGRGIQKKPGLSSIEIGSGIH 465
+K + +S+ G G+H
Sbjct: 226 DNLKQKNF---VSWTSLMTGYGMH 246
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 115/307 (37%), Gaps = 87/307 (28%)
Query: 45 TVQWTSSISRHCRSGRIAEA----------------------------------ALEFTR 70
V W + ++ + + GR +A L+ R
Sbjct: 79 VVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETLDVFR 138
Query: 71 MTLHG------------------TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLG 112
HG PN T L CA + L LG IH + +
Sbjct: 139 EMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAA--LRLGRQIHAYILRNH 196
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
D + V L+DMYAK G +D+A VFD ++ K+ +W +++ GY G + A+ +F
Sbjct: 197 FDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVF 256
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
D EM+ G++PD VT++ VL AC++ G +
Sbjct: 257 D-------------------------------EMRRVGLQPDGVTLLVVLYACSHSGMID 285
Query: 233 IGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSWNSIIVG 290
G+ + K+ + ++DL R G + A ++ + M + + + W +++ G
Sbjct: 286 QGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSG 345
Query: 291 FAVNGFV 297
++ V
Sbjct: 346 CRIHANV 352
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 163/454 (35%), Positives = 266/454 (58%), Gaps = 35/454 (7%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF------ 131
P TF +L+ C + + LG M+H + K G + +++ V TAL+D Y+K
Sbjct: 233 PTSYTFSSLVKACTFMCA--VELGQMVHCHIWKKGFE-SHLFVQTALVDFYSKLEILSEA 289
Query: 132 -------------------------GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
G MD A +F+ M +++ TWN MIDGY R G++E
Sbjct: 290 RKVFDEMCERDAFAWTAMVSALARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVE 349
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
SA +F++MP +D ISWT ++ + + +++AL + EM+++G+ PD VT+ +V +ACA
Sbjct: 350 SAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACA 409
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
++G L +G IH YV+ Q +V + + L+D+Y++CG ++ + +F ++ + L WN+
Sbjct: 410 HIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNA 469
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I G AV+G+ +AL F M++E P+GV+F L+AC+HAGL+++G F M + Y
Sbjct: 470 VIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDY 529
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+ P I HYGC+VD+ S++G L +AL ++++M +PN ++ G+LL C+ G+ +AE
Sbjct: 530 DIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDA 589
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK-PGLSSIEIGSGIH 465
++ L+ L+P +Y LL +MYA W IR MK +G++KK PG S IE+ IH
Sbjct: 590 VEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIH 649
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+F A SH +S+ IY +L L LKL GY+ E
Sbjct: 650 QFSASADSHPDSDKIYFVLTELDGQLKLAGYILE 683
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 125/254 (49%), Gaps = 45/254 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ WT+ I+ + ++ + +A ++ M L+G P+ +T T+ S CA + L LG IH
Sbjct: 364 ISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGA--LELGKEIH 421
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V GL+ + V +G+AL+DMYAK G +DL+ ++F + K+ + WNA+I+G G
Sbjct: 422 HYVMSQGLNLD-VYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYA 480
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A+RMF AI M+ + P+ VT IS+L+AC
Sbjct: 481 EKALRMF-------AI------------------------MEREKIMPNGVTFISILSAC 509
Query: 226 ANVGTLGIG----LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
+ G + G L + R D + +++ ++D+ S+ G + A ++ + M
Sbjct: 510 THAGLVDEGRSRFLSMTR---DYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEP- 565
Query: 282 VSWNSIIVGFAVNG 295
NSII G +NG
Sbjct: 566 ---NSIIWGALLNG 576
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 20/298 (6%)
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
++ F + I + V F +M + + A++ GFV GY AL+C+
Sbjct: 165 IQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVH 224
Query: 206 M-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
M + S V P T S++ AC + + +G +H ++ K+ F+ ++ V L+D YS+
Sbjct: 225 MLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLE 284
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
+ AR+VF M +R +W +++ A G + A + F M + + ++ +
Sbjct: 285 ILSEARKVFDEMCERDAFAWTAMVSALARVGDMDSARKLFEEMPER----NTATWNTMID 340
Query: 325 ACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK--- 381
+ G +E F+ M + I + ++ YS+ + +DAL + M +
Sbjct: 341 GYARLGNVESAELLFNQMP-----TKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGII 395
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYL----VDLDPGVDSNYVLLANMYAAVGKWD 435
P+EV + ++ +AC G + L + + Y+ ++LD + S L +MYA G D
Sbjct: 396 PDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSA---LVDMYAKCGSLD 450
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/462 (35%), Positives = 262/462 (56%), Gaps = 32/462 (6%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T V W + I+ + +GR EA F M P+ T ++++S CA S + L
Sbjct: 157 TERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQ--SGSIEL 214
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +H V D G +V NA+ID Y
Sbjct: 215 GRQVHSWV----------------DDDDDDHGFSSSLKIV------------NALIDLYS 246
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ GD+E+A +F+ + +D +SW L+ G+ ++EAL F+EM SG P+ VT++S
Sbjct: 247 KCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLS 306
Query: 221 VLNACANVGTLGIGLWIHRYVLKQ--DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
VL ACA++G + IG WIH Y+ K+ + + +LID+Y++CG IE A QVF M
Sbjct: 307 VLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLY 366
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R+L SWN++I GFA++G A + F+ M+ +PD ++F G L+ACSH+GL++ G +
Sbjct: 367 RSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQI 426
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M + Y ++P++EHYGC++DL +G ++A ++ MPM+P+ V+ SLL AC+ G
Sbjct: 427 FKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHG 486
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ LAE + L+ ++P +YVLL+N+YA G+W+ ++R + G+G++K PG SSI
Sbjct: 487 NLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSI 546
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
E+ S +HEF+ GD+ H IY MLE + L+ G+ P+T
Sbjct: 547 EVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDT 588
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 221/442 (50%), Gaps = 52/442 (11%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + + H S A + RM G PN +F LL CA S+ G IH
Sbjct: 32 WNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCA--KSKAFEEGRQIHAQ 89
Query: 108 VCKLG--LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V KLG LDR V T+L+ MYA+ G ++ A VFDA + + A+I GY RGD
Sbjct: 90 VLKLGCGLDR---YVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDF 146
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
SA ++FDE+ RD +SW A++ G+V+ G +EEALE F+EM + V PD T++SV++AC
Sbjct: 147 RSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSAC 206
Query: 226 ANVGTLGIGLWIHRYV----LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
A G++ +G +H +V F ++K+ N LIDLYS+CG +E A +F+ + + +
Sbjct: 207 AQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDV 266
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSWN++I G+ EAL F M + G P+ V+ L AC+H G I+ G R+ +
Sbjct: 267 VSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIG-RWIHV 325
Query: 342 M--KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM--------------------- 378
KK+ V+ ++D+Y++ G +E A V +M
Sbjct: 326 YIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRA 385
Query: 379 -------------PMKPNEVVLGSLLAACRTKGDIILAERLMKYLV---DLDPGVDSNYV 422
++P+++ LL+AC G + L ++ K + +L P ++ +Y
Sbjct: 386 NAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLE-HYG 444
Query: 423 LLANMYAAVGKWDGAGKIRRTM 444
+ ++ G + A ++ TM
Sbjct: 445 CMIDLLGHSGLFKEAEEMIHTM 466
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 153/363 (42%), Gaps = 48/363 (13%)
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM----PVRDAISWTAL 186
F + A VF+ ++ + WN M+ G+ D SA+ M+ M + ++ S+ L
Sbjct: 11 FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFL 70
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
L K FEE + ++ G D S+++ A G GL R V
Sbjct: 71 LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNG----GLEDARKVFDASS 126
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
+V C LI Y+ G AR+VF + +R +VSWN++I G+ NG EALE F
Sbjct: 127 HRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKE 186
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLR---YFDIMKKIYRVSPRIEHYGCIVDLYS 363
M + +PD + ++AC+ +G IE G + + D + S ++ ++DLYS
Sbjct: 187 MMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYS 246
Query: 364 RAGRLEDALNVVENMPMK----------------------------------PNEVVLGS 389
+ G +E A + E + K PN+V L S
Sbjct: 247 KCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLS 306
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKG 446
+L AC G I + + Y+ GV + L L +MYA G + A ++ +M
Sbjct: 307 VLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLY 366
Query: 447 RGI 449
R +
Sbjct: 367 RSL 369
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+ +A VF+ + + L+ WN+++ G A + ALE + M G P+ SF L +
Sbjct: 14 LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMKPN 383
C+ + E+G + I ++ ++ ++ Y ++ +Y+R G LEDA V + + +
Sbjct: 74 CAKSKAFEEGRQ---IHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHR-D 129
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRT 443
V +L+ ++GD A ++ + + D V N ++ Y G+++ A ++ +
Sbjct: 130 VVSCTALITGYASRGDFRSARKVFDEITERDV-VSWNAMITG--YVENGRYEEALELFKE 186
Query: 444 MKGRGIQKKPGL-----------SSIEIGSGIHEFM 468
M ++ G SIE+G +H ++
Sbjct: 187 MMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWV 222
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/485 (35%), Positives = 274/485 (56%), Gaps = 37/485 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFT-RMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
+ WT+ I R + E ALEF M G N TF+ +L PS G +
Sbjct: 91 SYSWTTMI-RGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQE--GRI 147
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM------------------- 144
+HG + K+G + V AL+ MY K G + A ++FD M
Sbjct: 148 VHGKLVKVGFCYD-VFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCG 206
Query: 145 ---RVKSSF---------TWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVK 192
R + F +WNA++ GY + G ++ A +FD MP RD +SW ++++ +V+
Sbjct: 207 DTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQ 266
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
G EALE F+EM ++GV D + I S+L+ACA +G L +G WIH Y+ + +++V +
Sbjct: 267 NGRAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFL 326
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
L+D+Y++CGCI+ A VF M ++ L SWN+++ G A++G ALE F M+ G
Sbjct: 327 DTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGV 386
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
P+ ++F L+ACSH G +E+G + F+ M K + ++P++EHYGC+VD+ R G + +A
Sbjct: 387 GPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAK 446
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
++ MP++PN V+ G+LL AC+ G + E ++ Y+ L YVLL+N++AA
Sbjct: 447 EMIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKS 506
Query: 433 KWDGAGKIRRTMKGRGIQKK-PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
+W+ K R+ MK G++KK PG SSIE+ S +H+F A DR H + + +++E L+ L
Sbjct: 507 QWNEVEKTRKMMKQMGVEKKIPGYSSIELDSVVHDFFAEDRLHSKWREVSTVIERLNTHL 566
Query: 492 KLCGY 496
++ GY
Sbjct: 567 EVKGY 571
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 20/313 (6%)
Query: 145 RVKSSFTWNAMIDGY-MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF 203
++K +F ++ Y + +I+ A +F + D+ SWT ++ GFV+ E+ALE +
Sbjct: 55 QIKDTFIATKTVESYAVSARNIDYAFWVFVGINYPDSYSWTTMIRGFVEAKNPEKALEFY 114
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
M+ GVE + T + VL A + G +H ++K F +V N LI +Y +C
Sbjct: 115 GLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLVKVGFCYDVFTRNALIHMYLKC 174
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
G I A +F M +V+WN++I G G A F M + S+ +
Sbjct: 175 GSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERARRLFGEMPERNVG----SWNAVV 230
Query: 324 TACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM--- 380
S G ++ FD+M + VS +G ++ Y + GR +AL + + M +
Sbjct: 231 GGYSKLGHVDIARSLFDLMPERDVVS-----WGSMISAYVQNGRAAEALELFKEMMLAGV 285
Query: 381 KPNEVVLGSLLAACRTKGDIILAERLMKYL----VDLDPGVDSNYVLLANMYAAVGKWDG 436
+ +++ S+L+AC G + + + Y+ + D +D+ L +MYA G D
Sbjct: 286 SADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDT---ALVDMYAKCGCIDT 342
Query: 437 AGKIRRTMKGRGI 449
A + TM + +
Sbjct: 343 AFGVFNTMPRKNL 355
>gi|297833170|ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330307|gb|EFH60726.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 267/443 (60%), Gaps = 7/443 (1%)
Query: 55 HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLG-L 113
+ + G EA + +M G P+ T + LL C + LG +HG + + G +
Sbjct: 206 YAKQGFGLEALELYYKMVSDGIEPDEYTLLGLLVCCGHLSD--IRLGKGVHGWIERRGPV 263
Query: 114 DRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
+N+++ ALLDMY K LA FDA++ K +WN M+ G++R GD+E+A +FD
Sbjct: 264 YSSNLILRNALLDMYFKCKESGLAKRAFDALKKKDMRSWNTMVVGFVRLGDMEAAQAVFD 323
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEAL-ECFREMQI-SGVEPDYVTIISVLNACANVGTL 231
+MP RD +SW +LL + K+G + A+ E F EM I V+PD VT++S+++ AN G L
Sbjct: 324 QMPQRDLVSWNSLLFCYSKKGCDQRAVRELFYEMLIVEKVKPDRVTMVSLISGAANNGEL 383
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
G W+H +++ + + + + LID+Y +CG IE A VF+ ++ + W S+I GF
Sbjct: 384 SHGRWVHGLMIRLQLEGDAFLSSALIDMYCKCGLIERAFMVFKTATEKDVPLWTSMITGF 443
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR 351
A +G+ +AL+ F MQ+E P+ V+ LTACSH+GL+E+GL F MK+ + P
Sbjct: 444 AFHGYGQQALQLFKRMQEEDVTPNKVTLLAVLTACSHSGLVEEGLHVFYHMKEKFGFHPE 503
Query: 352 IEHYGCIVDLYSRAGRLEDALNVVEN-MPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
EHYG +VDL RAGRLE+A ++V+N MPM+P++ + GS+L+ACR DI AE + L
Sbjct: 504 TEHYGSLVDLLCRAGRLEEAKDIVQNKMPMRPSQSMWGSILSACREGEDIETAELALSEL 563
Query: 411 VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAG 470
+ L+P + YVLL+N+YA VG+W + K R M+ RG++K G SS+ G+H F+A
Sbjct: 564 LKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMESRGVKKTAGYSSVVGVEGVHSFVAA 623
Query: 471 DR-SHIESEHIYSMLELLSFDLK 492
++ +H I +L+ L ++K
Sbjct: 624 EKQNHPRWTEIKRILQHLHNEMK 646
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 138/278 (49%), Gaps = 12/278 (4%)
Query: 77 NPNHITFITLLSGCADFPSQCLFL-GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMD 135
NPN + T++S + ++C L +MI ++ DR + ++ ++
Sbjct: 96 NPNVFVYNTMISAVSSSKNECFGLYSSMIR---YRVSPDRQTFLHLMKASSFLSEVKQIH 152
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
+V + + ++ WN+++ YM G + A ++F MP D S+ ++ G+ K+G+
Sbjct: 153 CHIIVSGCLSL-GNYLWNSLVKFYMELGSLGFAEKVFAIMPQPDVSSFNVMIVGYAKQGF 211
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD--FKDNVKVC 253
EALE + +M G+EPD T++ +L C ++ + +G +H ++ ++ + N+ +
Sbjct: 212 GLEALELYYKMVSDGIEPDEYTLLGLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILR 271
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
N L+D+Y +C A++ F + K+ + SWN+++VGF G + A F+ M +
Sbjct: 272 NALLDMYFKCKESGLAKRAFDALKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPQR--- 328
Query: 314 PDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSP 350
D VS+ L S G + +R F M + +V P
Sbjct: 329 -DLVSWNSLLFCYSKKGCDQRAVRELFYEMLIVEKVKP 365
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/485 (35%), Positives = 270/485 (55%), Gaps = 38/485 (7%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
S I + +G EA L + RM + G PNH TF +LSGC + C G +HG V
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCE--GIQVHGSV 157
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTW---------------- 152
K+GL+ + V + L+ YA+ G MD VF+ M ++ +W
Sbjct: 158 VKMGLEED-VFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEA 216
Query: 153 -------------NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
NA++D YM+ G I++A R+FDE R+ + + +L+ + ++G EA
Sbjct: 217 VSLFFEMLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREA 276
Query: 200 LECFREMQISGVEPDYVTIISVLNACANV-----GTLGIGLWIHRYVLKQDFKDNVKVCN 254
L EM G PD VT++S ++A A + G + G W+H Y+ K ++++
Sbjct: 277 LAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNT 336
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
L+D+++RCG + A QVF +M +R + +W + I A+ G A FN M +G KP
Sbjct: 337 ALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKP 396
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
D V F LTACSH G +E GL F +M+ + +SP+IEHYGC+VDL RAG L +A ++
Sbjct: 397 DVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAFDL 455
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
+++MPM+PN+VV GSLLAACR ++ +A + + +L P +VLL+N+YA+ GKW
Sbjct: 456 IKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKW 515
Query: 435 DGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC 494
++R ++ +G++K PG SS+++ IHEF +GD SH E HI ML+ ++
Sbjct: 516 TDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDA 575
Query: 495 GYVPE 499
G++P+
Sbjct: 576 GHIPD 580
>gi|224136482|ref|XP_002326871.1| predicted protein [Populus trichocarpa]
gi|222835186|gb|EEE73621.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 176/470 (37%), Positives = 268/470 (57%), Gaps = 67/470 (14%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P++ TF L CA ++ G HG V K+G + + V TAL+DMYAKFG + LA
Sbjct: 100 PDNFTFTVLAKCCA--LRMAVWEGLETHGHVVKIGFCFD-MYVSTALVDMYAKFGNLGLA 156
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDI-------------------------------E 166
VF+ M +S +W A+I GY+RRGD+ E
Sbjct: 157 RKVFNDMPDRSLVSWTALIGGYVRRGDMGNAWFLFKLMPGRDSAAFNLLIDGYVKVGDME 216
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRG-------YFE---------------------- 197
SA +FDEMP R+ ISWT+++ G+ G F+
Sbjct: 217 SARSLFDEMPERNVISWTSMIYGYCNNGDVLSARFLFDAMPEKNLVSWNAMIGGYCQNKQ 276
Query: 198 --EALECFREMQISGV-EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
EAL+ FRE+Q S V EP+ VT++S+L A A +G L +G W+HR+V ++ V VC
Sbjct: 277 PHEALKLFRELQSSTVFEPNEVTVVSILPAIATLGALELGEWVHRFVQRKKLDAAVNVCT 336
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
+L+D+Y +CG I AR+VF + K+ +WN++I GFA+NG EALE F+ MQ+EG KP
Sbjct: 337 SLVDMYLKCGEISKARKVFSEIPKKETATWNALINGFAMNGLASEALEAFSEMQQEGIKP 396
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
+ ++ TG L+ACSH GL+E+G F M + +SP+IEHYGC+VDL RAG L++A N+
Sbjct: 397 NDITMTGVLSACSHGGLVEEGKGQFKAMIE-SGLSPKIEHYGCLVDLLGRAGCLDEAENL 455
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
+++MP + N ++L S AC D+ A+R++ V+++PG + YV++ N+YA +W
Sbjct: 456 IKSMPFEANGIILSSFSFACGFSNDVTRAQRVLNQAVNMEPGNNGIYVMMRNLYAMEERW 515
Query: 435 DGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
+I M+ RG +K+ G S+IE+ S + EF++G +H + + I S++
Sbjct: 516 KDVKEINGLMRRRGAKKEVGSSAIEVDSRVSEFISGGIAHPQLDVIESVI 565
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 108/264 (40%), Gaps = 66/264 (25%)
Query: 45 TVQWTSSISRHCRSGRIAEA------------------------------ALEFTRMTLH 74
+ WTS I +C +G + A AL+ R
Sbjct: 230 VISWTSMIYGYCNNGDVLSARFLFDAMPEKNLVSWNAMIGGYCQNKQPHEALKLFRELQS 289
Query: 75 GT--NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFG 132
T PN +T +++L A + L LG +H V + LD V V T+L+DMY K G
Sbjct: 290 STVFEPNEVTVVSILPAIATLGA--LELGEWVHRFVQRKKLDA-AVNVCTSLVDMYLKCG 346
Query: 133 RMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVK 192
+ A VF + K + TWNA+I+G F
Sbjct: 347 EISKARKVFSEIPKKETATWNALING-------------------------------FAM 375
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
G EALE F EMQ G++P+ +T+ VL+AC++ G + G + +++ ++
Sbjct: 376 NGLASEALEAFSEMQQEGIKPNDITMTGVLSACSHGGLVEEGKGQFKAMIESGLSPKIEH 435
Query: 253 CNTLIDLYSRCGCIEFARQVFQRM 276
L+DL R GC++ A + + M
Sbjct: 436 YGCLVDLLGRAGCLDEAENLIKSM 459
>gi|242045040|ref|XP_002460391.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
gi|241923768|gb|EER96912.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
Length = 573
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/436 (37%), Positives = 248/436 (56%), Gaps = 5/436 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F + G +P+ + L+ CA + A +H K G ++ V L+
Sbjct: 66 FDHLLRSGADPDPAAYELALASCARGKDRAT--AAQLHAHAAKRGFLASHRRVRCRLVHA 123
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR-MFDEMPVRDAISWTAL 186
YA G + A VFD WN ++ GY + G +R F MP RD++SW +
Sbjct: 124 YAVCGMLPHARRVFDGGTDNDMVAWNCLLRGYAQEGGDADLLRDFFARMPSRDSVSWNTV 183
Query: 187 LNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
L+ V G ++EA+ FREM S +PD VT++SV++A A +G L GLW H YV+++
Sbjct: 184 LSLCVVNGEYDEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAQGLWAHAYVIRKG 243
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSWNSIIVGFAVNGFVGEALEYF 304
+ K+ + LI++YS+CG +E A VF + KR+L +WN+++ GF NG G AL F
Sbjct: 244 VEVEEKLSSALINMYSKCGFLEGAVYVFDNVRGKRSLDTWNAMLAGFTANGCSGRALALF 303
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
M+ G P+ ++F L ACSH GL+E+G+R F M ++Y + P I HYGC+VDL+ R
Sbjct: 304 TRMETTGLMPNKITFNCILNACSHGGLVEEGMRCFQRMSRVYGIEPDIAHYGCMVDLFCR 363
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLL 424
AG E A +++ MPM+P+ +L +LL ACRT ++ L ++ L++ P + YVLL
Sbjct: 364 AGMFEKAEEIIQIMPMEPDASMLKALLGACRTHKNLELGKKAGHRLIEAAPNDHAGYVLL 423
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
+N+YA G W K+R+ M RG+ K PG SS+E+ IHEF++GD+SH IY ML
Sbjct: 424 SNIYALDGNWGRVHKVRKLMLDRGVLKTPGSSSVELNGVIHEFISGDKSHSRKRDIYKML 483
Query: 485 ELLSFDLKLCGYVPET 500
+ + LK GY P+T
Sbjct: 484 DEICQQLKSAGYTPDT 499
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 37/235 (15%)
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF-KDNVKVCNTLI 257
AL F + SG +PD L +CA +H + K+ F + +V L+
Sbjct: 62 ALRLFDHLLRSGADPDPAAYELALASCARGKDRATAAQLHAHAAKRGFLASHRRVRCRLV 121
Query: 258 DLYSRCGCIEFARQVFQ--------------------------------RMHKRTLVSWN 285
Y+ CG + AR+VF RM R VSWN
Sbjct: 122 HAYAVCGMLPHARRVFDGGTDNDMVAWNCLLRGYAQEGGDADLLRDFFARMPSRDSVSWN 181
Query: 286 SIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDGL-RYFDIMK 343
+++ VNG EA+ F M + +PD V+ ++A ++ G + GL + +++
Sbjct: 182 TVLSLCVVNGEYDEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAQGLWAHAYVIR 241
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
K V ++ ++++YS+ G LE A+ V +N+ K + ++LA G
Sbjct: 242 KGVEVEEKLS--SALINMYSKCGFLEGAVYVFDNVRGKRSLDTWNAMLAGFTANG 294
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/452 (36%), Positives = 264/452 (58%), Gaps = 5/452 (1%)
Query: 52 ISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPS--QCLFLGAMIHGLVC 109
I H SGR A + + G P T +LL A P+ L +H
Sbjct: 60 IRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHAHAV 119
Query: 110 KLGLDRNNVMVGTALLDMYAKF-GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
+LGL ++V AL+ ++A GR+ A ++ + T+N +I + R G + A
Sbjct: 120 RLGLA-GFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVADA 178
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
+FDEMP R+A+SW+A++NG+V+ G EAL F +MQ GV PD ++ VL ACA +
Sbjct: 179 RSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQL 238
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
G L G W+H Y+ + + V + L+D+Y++CG ++ +VF+ M + +++W ++I
Sbjct: 239 GALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMI 298
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
G A++G ++L F+ M+ G KPD ++F GAL AC+H GL++ G F+ M Y +
Sbjct: 299 KGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGI 358
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
P+IEHYGC+VDL +R G L +A ++VE MPMKP+ ++ G+L+A CR ++ LAE ++K
Sbjct: 359 KPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIK 418
Query: 409 YLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFM 468
+ ++L+P YVLL N+Y+A G+ A +IR M+ +G++K PG S++EI IH+F+
Sbjct: 419 HWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVEIKGVIHQFI 478
Query: 469 AGDRSHIESEHIYSMLELLSFDLKL-CGYVPE 499
GD SH + I + + ++L GYVP+
Sbjct: 479 VGDLSHPRIKDILTKWYEIDSRIRLEEGYVPD 510
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/456 (37%), Positives = 267/456 (58%), Gaps = 35/456 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WTS IS + ++ EA L + +M G +P+ +T TL+S CA+ L +G +H
Sbjct: 146 VVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKD--LGVGMKLH 203
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ ++ + V+ G+AL++MYAK G D+
Sbjct: 204 SHIREMDMKICAVL-GSALVNMYAKCG-------------------------------DL 231
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLNA 224
++A ++FD++ +D +W+AL+ G+VK EAL+ FRE+ S + P+ VTI++V++A
Sbjct: 232 KTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISA 291
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA +G L G W+H Y+ + +V + N+LID++S+CG I+ A+++F M + L+SW
Sbjct: 292 CAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISW 351
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
NS++ GFA++G EAL F MQ +PD ++F G LTACSHAGL+++G + F ++
Sbjct: 352 NSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEA 411
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y V + EHYGC+VDL RAG L +A + MP++P+ + GS+L ACR ++ L E
Sbjct: 412 LYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGE 471
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++L+ L+P D Y+LL+N+YA W+ K+R M +GIQK PG SS+ I +
Sbjct: 472 EAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIA 531
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
H F+AGD SH E I ML + LKL GYV +T
Sbjct: 532 HSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADT 567
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 169/339 (49%), Gaps = 37/339 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPSQCLFLGAM 103
+ W S + S A +T M N P+ TF +LL GCA +G +
Sbjct: 43 VLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLE--FKVGKV 100
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+HG V K L +++ + T LL+MYA G
Sbjct: 101 LHGQVVKYML-HSDLYIETTLLNMYAACG------------------------------- 128
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D++SA +F+ M R+ + WT++++G++K EAL +++M+ G PD VT+ ++++
Sbjct: 129 DLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVS 188
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA + LG+G+ +H ++ + D K + + L+++Y++CG ++ ARQVF ++ + + +
Sbjct: 189 ACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYA 248
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQ-KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
W+++I G+ N EAL+ F + +P+ V+ ++AC+ G +E G D +
Sbjct: 249 WSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYI 308
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ + + ++D++S+ G ++ A + ++M K
Sbjct: 309 TRTQK-GHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK 346
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 145/316 (45%), Gaps = 42/316 (13%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNACA 226
A +F D ++W ++L FV AL+ + EM + S PD T S+L CA
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ +G +H V+K ++ + TL+++Y+ CG ++ AR +F+RM R V W S
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI- 345
+I G+ N EAL + M+++GF PD V+ ++AC+ + G++ ++++
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP-------------------------- 379
++ + +V++Y++ G L+ A V + +
Sbjct: 211 MKICAVLG--SALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQL 268
Query: 380 ---------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPG--VDSNYVLLANMY 428
M+PNEV + ++++AC GD+ + Y+ G V N L+ +M+
Sbjct: 269 FREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLI-DMF 327
Query: 429 AAVGKWDGAGKIRRTM 444
+ G D A +I +M
Sbjct: 328 SKCGDIDAAKRIFDSM 343
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/463 (37%), Positives = 269/463 (58%), Gaps = 38/463 (8%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNP---NHITFITLLSGCADFPSQCL 98
V V W++ + + + EA F ++ + + + +T T++ CA+ L
Sbjct: 284 VKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTD--L 341
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G +H K G + +MVG LL MYAK G +I+G
Sbjct: 342 STGTCLHCYAIKSGFVLD-LMVGNTLLSMYAKCG----------------------IING 378
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
A+R F+EM +RDA+S+TA+++G+V+ G EE L F EMQ+SG+ P+ T+
Sbjct: 379 ---------AMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATL 429
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
SVL ACA++ L G H Y + F + +CN LID+Y++CG I+ AR+VF RMHK
Sbjct: 430 ASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHK 489
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R +VSWN++I+ + ++G EAL F++MQ EG KPD V+F ++ACSH+GL+ +G +
Sbjct: 490 RGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYW 549
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F+ M + + + PR+EHY C+VDL SRAG ++ + +E MP++P+ V G+LL+ACR
Sbjct: 550 FNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYK 609
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ L E + K + L P N+VLL+NMY+AVG+WD A ++R T K +G +K PG S I
Sbjct: 610 NVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWI 669
Query: 459 EIGSGIHEFMAGD-RSHIESEHIYSMLELLSFDLKLCGYVPET 500
EI +H F+ G RSH + I + L+ L ++K GY E+
Sbjct: 670 EISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAES 712
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 195/465 (41%), Gaps = 87/465 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W I + +G EA + +M +G PN TF +L C+ G I
Sbjct: 84 VVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASE--GREI 141
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + +L L+ +NV V TAL+D YAK G
Sbjct: 142 HCDIKRLRLE-SNVYVSTALVDFYAKC-------------------------------GC 169
Query: 165 IESAVRMFDEMPVRDAISWTALLNGF-VKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
++ A +FD+M RD ++W ++++GF + G ++E +MQ + V P+ TI+ VL
Sbjct: 170 LDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQ-NDVSPNSSTIVGVLP 228
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLV 282
A A V +L G IH + +++ F +V V ++D+Y +C CI++AR++F M + V
Sbjct: 229 AVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEV 288
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQ---------------------------------- 308
+W++++ + V F+ EALE F +
Sbjct: 289 TWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLH 348
Query: 309 ----KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
K GF D + L+ + G+I +R+F+ M VS + I+ Y +
Sbjct: 349 CYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVS-----FTAIISGYVQ 403
Query: 365 AGRLEDALNVVENMPMK---PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
G E+ L + M + P + L S+L AC + Y + D+
Sbjct: 404 NGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMI 463
Query: 422 V-LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
L +MYA GK D A K+ M RGI +++ I GIH
Sbjct: 464 CNALIDMYAKCGKIDTARKVFDRMHKRGI---VSWNTMIIAYGIH 505
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 155/338 (45%), Gaps = 44/338 (13%)
Query: 152 WNAMIDGYMRRGDIESAVRMFDEMPVR--DAISWTALLNGFVKRGYFEEALECFREMQIS 209
+ ++D Y+ +++ A +FD+MP R + + W L+ + G +EEA++ + +M
Sbjct: 54 FEKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGY 113
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G+ P+ T VL AC+ + G IH + + + NV V L+D Y++CGC++ A
Sbjct: 114 GITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDA 173
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVN-GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
++VF +MHKR +V+WNS+I GF+++ G E MQ + P+ + G L A +
Sbjct: 174 KEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQND-VSPNSSTIVGVLPAVAQ 232
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
+ G + V + G I+D+Y + ++ A + + M + NEV
Sbjct: 233 VNSLRHGKEIHGFCVRRGFVGDVVVGTG-ILDVYGKCQCIDYARRIFDMMGIVKNEVTWS 291
Query: 389 SLLAA--------------CR---TKGDIILAE--------RLMKYLVDLDPG------- 416
+++ A C+ K D+I+ R+ L DL G
Sbjct: 292 AMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYA 351
Query: 417 VDSNYVL-------LANMYAAVGKWDGAGKIRRTMKGR 447
+ S +VL L +MYA G +GA + M R
Sbjct: 352 IKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLR 389
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/485 (35%), Positives = 270/485 (55%), Gaps = 14/485 (2%)
Query: 19 QNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTN- 77
+NP NL + QI Q PT+ +S+ R + +F L +
Sbjct: 54 RNPT-NLLYSNQILDQC------AKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDV 106
Query: 78 --PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMD 135
P++ TF L+ CA + G +HG + K G + + V + L+ MYA+ +
Sbjct: 107 MSPDNYTFNFLVRTCAQSACEA---GPAVHGALIKHGFEYD-PHVESGLIFMYAEMSCLS 162
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
VF++++ M+ + GDI A +FD MP RD +SW A++ G+ +RG
Sbjct: 163 SCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQ 222
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
EAL F+ MQ+ GV+ + V++ISV+ AC ++G L G W H Y+ K + V +
Sbjct: 223 SREALNLFKLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTA 282
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
L+D+Y +CG ++ A +VF M+++ + +W++ I G A+NG+ + LE F+ M+ EG P+
Sbjct: 283 LVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPN 342
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
++F L CS G +++G +FD MK+ + + PR+EHYGC+VDLY RAGRLE+ALN +
Sbjct: 343 EITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFI 402
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
MP+KP+ G+LL ACR ++ L E + L++++ YV L+N+YA G WD
Sbjct: 403 NTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWD 462
Query: 436 GAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCG 495
+R++MK GI K PG S +E+ +HEF +GD+SH + I +M +S LKL G
Sbjct: 463 RVSNVRQSMKAEGISKLPGCSVMEVNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAG 522
Query: 496 YVPET 500
YV T
Sbjct: 523 YVAST 527
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/480 (36%), Positives = 267/480 (55%), Gaps = 71/480 (14%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLG--LDRNNVMVGTALLDMYAKFGRMD 135
P+ TF L CA + ++ G IH V +G LD + TAL+DMYAKFG+MD
Sbjct: 260 PDSFTFSVLAKSCA--LNMAIWEGQEIHSHVVAVGFCLD---LYAATALVDMYAKFGKMD 314
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIE----------------------------- 166
A +FD M +S +W A+I GY+R GD++
Sbjct: 315 CARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGD 374
Query: 167 --SAVRMFDEMPVRDAISWTALLNGFVKRGYFE--------------------------- 197
SA ++FDEMP R +SWT ++ G+ G +
Sbjct: 375 MCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQN 434
Query: 198 ----EALECFREMQ-ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
EAL+ F EMQ + +EPD VTI+SVL A A++G L +G W+HR+V ++ V
Sbjct: 435 KQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNV 494
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
LID+Y++CG I +R VF M ++ SWN++I FA+NG EAL F M +GF
Sbjct: 495 GTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGF 554
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
P+ ++ G L+AC+H+GL+E+G R+F M++ + ++P+IEHYGC+VDL RAG L++A
Sbjct: 555 MPNEITMIGVLSACNHSGLVEEGKRWFKAMEE-FGLTPKIEHYGCMVDLLGRAGCLQEAE 613
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
++E+MP + N ++L S L AC D+ AER++K + ++ D NY++L N+YA
Sbjct: 614 KLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEK 673
Query: 433 KWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+W A +++ M+ G++K+ G S+IE+ S + EF+AGDR H + E I+S+L L +K
Sbjct: 674 RWKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKWEAIHSVLGQLWVHMK 733
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 35/230 (15%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
W + IS + ++ + EA F M + P+ +T +++L AD + L LG +H
Sbjct: 424 WNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGA--LDLGGWVHR 481
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
V + LDR VGTAL+DMYAK G + + VFD M K + +WNA+I
Sbjct: 482 FVRRKKLDRA-TNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALI---------- 530
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
N F G +EAL F EM G P+ +T+I VL+AC
Sbjct: 531 ---------------------NAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACN 569
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+ G + G + + + ++ ++DL R GC++ A ++ + M
Sbjct: 570 HSGLVEEGKRWFKAMEEFGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESM 619
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 165 IESAVRMFDEMPVRD-AISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVL 222
I A RMFD P RD A +++ +V + E+ +R+++ + PD T +
Sbjct: 210 IVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLA 269
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+CA + G IH +V+ F ++ L+D+Y++ G ++ AR++F M R+ V
Sbjct: 270 KSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQV 329
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SW ++I G+ +G + A + F+ M + D +F + A G + + FD M
Sbjct: 330 SWTALIGGYVRSGDMDNAGKLFDQM----IEKDSAAFNTMIDAYVKLGDMCSARKLFDEM 385
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ VS I YG YS G L+ A ++ + MP K
Sbjct: 386 PERSVVSWTIMIYG-----YSSNGNLDSARSLFDAMPEK 419
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/442 (35%), Positives = 256/442 (57%), Gaps = 33/442 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I ++G + A F M + T + +LS C++ L LG +H
Sbjct: 178 VSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGD--LNLGQKVH 235
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + +V VG ALLDM Y++ D+
Sbjct: 236 SYIRHYIDMKADVFVGNALLDM-------------------------------YLKCDDL 264
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
SA ++FDEMPV++ ++W A+++G +G + EAL+ FR MQ GV+PD VT++ VLN+C
Sbjct: 265 NSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSC 324
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN+G L IG W+H Y+ + + V N L+D+Y++CG I+ A +VF+ M +R + S+
Sbjct: 325 ANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYT 384
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G A++G A + F+ M + G +P+ V+F G L ACSH GL+ +G +YF M
Sbjct: 385 AMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDK 444
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y++ P+ EHYGC++DL RAG +++A ++ M ++P+ G+LL ACR G++ + E
Sbjct: 445 YKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGES 504
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+M+ L +LDP + Y+L+ N+Y++V +W A KIR+TMK + ++K PG S IE+ +H
Sbjct: 505 VMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVH 564
Query: 466 EFMAGDRSHIESEHIYSMLELL 487
EF GD+SH S+ I + + L+
Sbjct: 565 EFRKGDKSHPRSKVIIANINLI 586
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 131/230 (56%), Gaps = 2/230 (0%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
+ N ++ Y G I ++FDE P RD +SWT L+ F K G + A+E F EM
Sbjct: 147 YVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDL 206
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEF 268
+ D T++ VL+AC+N+G L +G +H Y+ D K +V V N L+D+Y +C +
Sbjct: 207 RLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNS 266
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
A +VF M + +V+WN++I G A G EAL+ F MQ +G KPD V+ G L +C++
Sbjct: 267 AYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCAN 326
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
G++E G M++ + ++ + ++D+Y++ G +++A V E+M
Sbjct: 327 LGVLEIGKWVHAYMRRNHILADKFVG-NALLDMYAKCGSIDEAFRVFESM 375
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 122/293 (41%), Gaps = 50/293 (17%)
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD-NVKVCNTLID 258
+E EM + G+EPD TI VL A A + + G IH +K NV V NTL+
Sbjct: 95 MEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMR 154
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
LYS CG I ++VF R LVSW ++I F G A+E F M + DG +
Sbjct: 155 LYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRT 214
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
L+ACS+ G + G + ++ + + ++D+Y + L A V + M
Sbjct: 215 LVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEM 274
Query: 379 P----------------------------------MKPNEVVLGSLLAACRTKGDIILAE 404
P +KP+EV L +L +C G + + +
Sbjct: 275 PVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGK 334
Query: 405 RLMKYLVDLDPGVDSNYVL--------LANMYAAVGKWDGAGKIRRTMKGRGI 449
+ Y+ N++L L +MYA G D A ++ +MK R +
Sbjct: 335 WVHAYM-------RRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDV 380
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 142/346 (41%), Gaps = 81/346 (23%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + IS GR EA F M G P+ +T + +L+ CA+ L +G
Sbjct: 276 VKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLG--VLEIG 333
Query: 102 AMIHGLVCKLGLDRNNVM----VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
+H + RN+++ VG ALLDMYAK G +D A VF++M+ + +++ AMI
Sbjct: 334 KWVHAY-----MRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIF 388
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
G G+ A ++F EM FR G+EP+ VT
Sbjct: 389 GLALHGEANWAFQVFSEM---------------------------FR----VGIEPNEVT 417
Query: 218 IISVLNACANVGTLGIG-LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+ +L AC++ G + G + + K + + +IDL R G ++ A ++ +M
Sbjct: 418 FLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKM 477
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
R PD + L AC G ++ G
Sbjct: 478 EIR----------------------------------PDVFACGALLGACRIHGNVDIGE 503
Query: 337 RYFDIMKKIYRVSPRIE-HYGCIVDLYSRAGRLEDALNVVENMPMK 381
+M+K+ + P E Y + +LYS R +DAL + + M K
Sbjct: 504 ---SVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNK 546
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/347 (43%), Positives = 223/347 (64%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
NA++D Y + G + A +F++M +D ISWT+L+ G V G +EEAL F EM+I G+
Sbjct: 6 NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 65
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD + I +VL+ACA + L G +H LK ++ V N+L+ +Y++CGCIE A +V
Sbjct: 66 PDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKV 125
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F M + +++W ++IVG+A NG E+L ++N M G KPD ++F G L ACSHAGL+
Sbjct: 126 FDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLV 185
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
E G YF M+++Y + P EHY C++DL R+G+L +A ++ M ++P+ V +LLA
Sbjct: 186 EHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLA 245
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
ACR G++ L ER L +L+P YVLL+N+Y+A GKW+ A K RR MK RG+ K+
Sbjct: 246 ACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKE 305
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
PG S IE+ S +H FM+ DRSH + IYS ++ + +K GYVP+
Sbjct: 306 PGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPD 352
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 139/349 (39%), Gaps = 81/349 (23%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K T + WTS ++ +G EA F M + G +P+ I +LS CA+ L
Sbjct: 27 KMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAEL--TVL 84
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G +H K GL +++ V +L+ MYAK G ++ A VFD+M ++ TW A+I G
Sbjct: 85 EFGKQVHANFLKSGLG-SSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVG 143
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + G RG E+L + +M SGV+PD++T
Sbjct: 144 YAQNG-----------------------------RG--RESLNFYNBMIASGVKPDFITF 172
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
I +L AC S G +E R FQ M +
Sbjct: 173 IGLLFAC-----------------------------------SHAGLVEHGRSYFQSMEE 197
Query: 279 RTLVS-----WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
+ + +I +G + EA E N M +PD + L AC G +E
Sbjct: 198 VYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQM---AVQPDATVWKALLAACRVHGNVE 254
Query: 334 DGLRYFDIMKKIYRVSPR-IEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
G R ++ + P+ Y + +LYS AG+ E+A M ++
Sbjct: 255 LGER---AANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLR 300
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
V N L+D+Y++ G ++A VF++M + ++SW S++ G NG EAL F M+ G
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
PD + L+AC+ ++E G + + + +K S +++ +V +Y++ G +ED
Sbjct: 64 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDN--SLVSMYAKCGCIED 121
Query: 371 ALNVVENMPMK 381
A V ++M ++
Sbjct: 122 ANKVFDSMEIQ 132
>gi|224116552|ref|XP_002331925.1| predicted protein [Populus trichocarpa]
gi|222874597|gb|EEF11728.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 270/449 (60%), Gaps = 4/449 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V +TS I+ + + +A F+++ G P+ + + LS C Q L G ++H
Sbjct: 68 VTYTSLINLYLSTQLPIKAFSVFSKLVNEGLRPDSHSVVGALSACG--KKQDLLNGKLVH 125
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G++ + L N++ VG AL+DMY + G + +A +VF M +K +W ++++G++ +
Sbjct: 126 GMIFRFQLGANSI-VGNALIDMYCRNGEIKIAQLVFKQMGIKDVSSWTSLLNGFVMCNGL 184
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV-EPDYVTIISVLNA 224
ESA R+FDEMP R+ ++WTA++ G+V+ G LE FR+M+ G +P +T ++VL+
Sbjct: 185 ESARRVFDEMPWRNDVAWTAMITGYVRGGMPIRGLEMFRQMKAEGENQPTVITAVAVLSG 244
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G G +H Y+ K + V V N L+D+YS+ GC+E A ++F R+ K+ + SW
Sbjct: 245 CADLGAHDHGQAVHGYISKVNLDKGVTVSNALMDMYSKGGCVESAMKIFDRLVKKDVFSW 304
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I + +G ALE F M + G P+ V+F L+ CSH+GL+ + + F+ M +
Sbjct: 305 TTMISAHSSHGKGNHALEVFYDMLESGVIPNDVTFLLVLSGCSHSGLLVEANKLFNGMIQ 364
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y P+IEHYGC+VDL RAG LE+A +++NMPM P+ V+ SLL+AC + ++ LAE
Sbjct: 365 CYGFEPKIEHYGCMVDLLCRAGLLEEAKELIDNMPMDPDAVIWRSLLSACMNQRNLGLAE 424
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
K +++L+P D YVLL+N+Y + A K+R+ M + + KKP S IE+ +
Sbjct: 425 IAGKKIIELEPHDDGVYVLLSNIYHVANRMKDARKMRKMMGDQKVMKKPACSYIELNGVV 484
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKL 493
H+F + +H S IY +LE+++ L+L
Sbjct: 485 HQFHTENATHHASTKIYMLLEMINEHLRL 513
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 33/259 (12%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+++ Y + G+ A ++F + D +++T+L+N ++ +A F ++ G+ PD
Sbjct: 42 LVNRYAKLGNPRDAQKVFGYIQDPDRVTYTSLINLYLSTQLPIKAFSVFSKLVNEGLRPD 101
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR------------ 262
+++ L+AC L G +H + + N V N LID+Y R
Sbjct: 102 SHSVVGALSACGKKQDLLNGKLVHGMIFRFQLGANSIVGNALIDMYCRNGEIKIAQLVFK 161
Query: 263 -------------------CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
C +E AR+VF M R V+W ++I G+ G LE
Sbjct: 162 QMGIKDVSSWTSLLNGFVMCNGLESARRVFDEMPWRNDVAWTAMITGYVRGGMPIRGLEM 221
Query: 304 FNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M+ EG +P ++ L+ C+ G + G + K+ + + ++D+Y
Sbjct: 222 FRQMKAEGENQPTVITAVAVLSGCADLGAHDHGQAVHGYISKV-NLDKGVTVSNALMDMY 280
Query: 363 SRAGRLEDALNVVENMPMK 381
S+ G +E A+ + + + K
Sbjct: 281 SKGGCVESAMKIFDRLVKK 299
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 259/426 (60%), Gaps = 11/426 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I+ + ++G I +A F + IT+ T+++G A QC G +
Sbjct: 229 VVSWNAMIAGYVQNGLIEDALKLFQEIPKRDV----ITWNTMMAGYA----QC---GDVE 277
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ + + N++ ++ Y + G + A +F M ++ +WNA+I G+ + G
Sbjct: 278 NAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQ 337
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A+++F MP + +SW A++ G+ + G E AL+ F +MQ+ ++P+ T VL A
Sbjct: 338 VEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPA 397
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA + L G H V++ F+ +V V NTL+ +Y++CG IE AR+VF RM ++ S
Sbjct: 398 CAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASL 457
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+++IVG+A+NG E+LE F MQ G KPD V+F G L+AC HAGL+++G +YFDIM +
Sbjct: 458 SAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTR 517
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y ++P +EHYGC++DL RAG ++A +++ MP+KP+ + GSLL+ACRT +I L E
Sbjct: 518 FYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGE 577
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++ ++L+ L+P + YVLL+N+YAA G+WD G +R MK R ++KK G S I I +
Sbjct: 578 KVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQV 637
Query: 465 HEFMAG 470
H F+ G
Sbjct: 638 HAFLVG 643
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 176/337 (52%), Gaps = 15/337 (4%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V WT+ I+ + R EA F M G PNH TF ++L C D LG
Sbjct: 128 VKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLE----VLG 183
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
H + K G + +NV VG L+DMYAK G ++ A +FD M + +WNAMI GY++
Sbjct: 184 E-FHDEIVKGGFE-SNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQ 241
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G IE A+++F E+P RD I+W ++ G+ + G E A+E F +M E + V+ ++
Sbjct: 242 NGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMP----EQNLVSWNTM 297
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
+ G++ + + + ++ NV N +I +++ G +E A ++F+ M + +
Sbjct: 298 IAGYVQNGSVKEAFKLFQIMPER----NVISWNAVISGFAQNGQVEEALKLFKTMPECNV 353
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSWN++I G++ NG AL+ F MQ KP+ +F L AC+ ++E G ++
Sbjct: 354 VSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEV 413
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+ + S + +V +Y++ G +EDA V + M
Sbjct: 414 VIRSGFQSDVLVG-NTLVGMYAKCGSIEDARKVFDRM 449
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 195/397 (49%), Gaps = 69/397 (17%)
Query: 56 CRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDR 115
C+ GR+ EA M +G P+ T+ +LL GC + ++ L ++H + + +
Sbjct: 40 CKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLN--AKSLPDAKLLHAHMIQTQFEC 97
Query: 116 NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM 175
++ +G L+ +Y K G + A R+FDEM
Sbjct: 98 QDISLGNKLVSIYVKLG-------------------------------SLVEARRVFDEM 126
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
PV++ +SWTA++ + + + +EAL F EMQ G++P++ T S+L AC ++ LG
Sbjct: 127 PVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLG--- 183
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
H ++K F+ NV V N L+D+Y++ GCIEFAR++F +M +R +VSWN++I G+ NG
Sbjct: 184 EFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNG 243
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK------------ 343
+ +AL+ F + K D +++ + + G +E+ + F+ M
Sbjct: 244 LIEDALKLFQEIPKR----DVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIA 299
Query: 344 ------------KIYRVSPR--IEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
K++++ P + + ++ +++ G++E+AL + + MP + N V +
Sbjct: 300 GYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMP-ECNVVSWNA 358
Query: 390 LLAACRTKGDIILAERLM--KYLVDLDPGVDSNYVLL 424
++A G A +L +VD+ P ++ ++L
Sbjct: 359 MIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVL 395
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 104/197 (52%), Gaps = 5/197 (2%)
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
L+ K+G EAL ++M +G+ P T S+L C N +L +H ++++
Sbjct: 35 LVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQ 94
Query: 246 FK-DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
F+ ++ + N L+ +Y + G + AR+VF M + +VSW ++I +A + EAL +F
Sbjct: 95 FECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFF 154
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
MQ G +P+ +F L AC+ ++ G + +I+K + + + + +VD+Y++
Sbjct: 155 YEMQDVGIQPNHFTFASILPACTDLEVL--GEFHDEIVKGGFESNVFVGN--GLVDMYAK 210
Query: 365 AGRLEDALNVVENMPMK 381
G +E A + + MP +
Sbjct: 211 RGCIEFARELFDKMPQR 227
>gi|302142753|emb|CBI19956.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 166/429 (38%), Positives = 259/429 (60%), Gaps = 20/429 (4%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA---DFPSQCLFLG 101
V W + I + +G A L F +M++ +T+I ++ G A D + F
Sbjct: 31 AVTWNAMICGYLGNGDSKSAVLLFEKMSIRTA----VTWIEMIDGFARSGDTETARRFFD 86
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ L NV+ T ++D YA+ M+ A VF+ M ++ F W++MI GY +
Sbjct: 87 DVPSEL--------RNVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISGYCK 138
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+G+++ A +FD +PVR+ ++W +L++G+ + G+ EEALE F +MQ G EPD VTI SV
Sbjct: 139 KGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASV 198
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+AC+ +G L G IH + + K N V N L+D+Y++CG + AR +F+ M R
Sbjct: 199 LSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRNR 258
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
WNS+I GFA++G EALE+F M+ PD ++F L+AC+H G + GL F
Sbjct: 259 ACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEIFSR 318
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M+K Y ++ I+HYGC++DL RAGR+++A ++++ MP+KPN+VV G+LL ACR D+
Sbjct: 319 MEK-YGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVVWGALLGACRVHLDME 377
Query: 402 LAERLMKYLVDLD----PGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
+A+R+++ +V +D G DS+YVLL+N+YAA +W+ A K+R M +G QK G SS
Sbjct: 378 MADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMRMEMANKGFQKTSGCSS 437
Query: 458 IEIGSGIHE 466
I G+ HE
Sbjct: 438 IMPGNNTHE 446
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%)
Query: 119 MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR 178
M+GT+L+ MYAK G + + VFD M +++ TWNAMI GY+ GD +SAV +F++M +R
Sbjct: 1 MIGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIR 60
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIH 238
A++W +++GF + G E A F + + + VT +++ A +
Sbjct: 61 TAVTWIEMIDGFARSGDTETARRFFDD--VPSELRNVVTWTVMVDGYARNAEMEAA---- 114
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
R V + + N +++I Y + G ++ AR +F R+ R LV+WNS+I G+A NGF
Sbjct: 115 REVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSE 174
Query: 299 EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK-KIYRVSPRIEHYGC 357
EALE F MQ EGF+PD V+ L+ACS GL++ G + +M K +++ +
Sbjct: 175 EALEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFV--LNG 232
Query: 358 IVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGV 417
+VD+Y++ G L +A + E M + N S+++ G A + D G
Sbjct: 233 LVDMYAKCGDLANARLIFEGMAHR-NRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGP 291
Query: 418 D 418
D
Sbjct: 292 D 292
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 277/484 (57%), Gaps = 13/484 (2%)
Query: 20 NPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTN-- 77
NPN NL + Q+ +NS+ NPT+ +S+ R + F LH
Sbjct: 55 NPN-NLHYSNQV---LDNSQ---NPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYL 107
Query: 78 -PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
P++ TF L+ A + G+ +HG K G + + V + L+ MYA+ G +D
Sbjct: 108 APDNYTFTFLVRTSAQLLAHGT--GSSVHGAAVKYGFEYDP-HVQSGLIYMYAELGGLDA 164
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
VF ++ AM+ + GD+ A ++FD+M +D I+W A+++G+V+ G
Sbjct: 165 CHRVFSSICEPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQS 224
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
EAL F MQ GV+ + V+++SVL+AC+++G L G W H Y+ + + + + L
Sbjct: 225 REALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTAL 284
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
ID+Y++CG + A +VF M ++ + +W+S I G A+NG + LE F+ M+++ +P+
Sbjct: 285 IDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNE 344
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
++F L CS GL+E+G ++F+ M K+Y + PR+EHYGC+VDLY RAG L++ALN +
Sbjct: 345 ITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFIN 404
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDG 436
+MP++P+ G+LL AC+ ++ + E + +V+L+ YVLL+N+YA WD
Sbjct: 405 SMPVRPHVGAWGALLNACKIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDR 464
Query: 437 AGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGY 496
+R+TM +G++K+PG S IE+G +HEF GD+SH I ML +S LKL GY
Sbjct: 465 VSNVRQTMNVKGVRKQPGCSVIEVGGEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGY 524
Query: 497 VPET 500
V T
Sbjct: 525 VANT 528
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/438 (39%), Positives = 262/438 (59%), Gaps = 18/438 (4%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
PN TF ++L CA + + G IHGL K G + V + L+ MY G M A
Sbjct: 119 PNRFTFPSVLKACA--KTGKIQQGKQIHGLALKYGFG-GDEFVMSNLVRMYVICGLMKDA 175
Query: 138 TVVFDAMRVKSSFT--------------WNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
V+F ++ WN MIDGYMR GD ++A +FD+M R +SW
Sbjct: 176 CVLFYKNIIEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSW 235
Query: 184 TALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
+++G+ + G+F++A+E FREM+ + P+YVT++SVL A + +G+L +G W+H Y
Sbjct: 236 NTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAE 295
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
+ + + + LID+YS+CG IE A VF+R+ + +++W+++I GFA++G G+A++
Sbjct: 296 DSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAID 355
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M++ G +P V++ LTACSHAGL+E+G RYF M + + PRIEHYGC+VDL
Sbjct: 356 CFCKMRQAGVRPSDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLL 415
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
R G L++A + NMP+KP++V+ +LL ACR ++ + +R+ L+D+ P YV
Sbjct: 416 GRLGLLDEAEEFILNMPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYV 475
Query: 423 LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS 482
L+NMYA+ G W ++R MK I+K PG S I+I +HEF+ D SH ++ I S
Sbjct: 476 ALSNMYASQGNWSEVSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINS 535
Query: 483 MLELLSFDLKLCGYVPET 500
ML +S L+L GY P T
Sbjct: 536 MLVEISDKLRLAGYRPIT 553
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 72/276 (26%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE--ALECFREMQISG-VEPDYVTIIS 220
D++ A ++F++MP R+ SW ++ GF + + A+ F EM +EP+ T S
Sbjct: 67 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPS 126
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDF--------------------KD------------ 248
VL ACA G + G IH LK F KD
Sbjct: 127 VLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIER 186
Query: 249 -------------NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
V + N +ID Y R G + AR +F +M +R++VSWN++I G++ NG
Sbjct: 187 EMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNG 246
Query: 296 FVGEALEYFNSMQK-EGFKPDGVSFTGALTACSHAGLIE-----------DGLRYFDIMK 343
F +A+E F M+K E +P+ V+ L A S G +E G+R D++
Sbjct: 247 FFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLG 306
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
++D+YS+ G +E A+ V E +P
Sbjct: 307 ------------SALIDMYSKCGIIEKAIMVFERLP 330
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 251/441 (56%), Gaps = 43/441 (9%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA---DFPSQCLFLGA 102
+ WT+ I + + G +EA F RM + +T + +LS C+ DF L
Sbjct: 205 ISWTTLIQAYSKMGYPSEAIAAFFRM---NCTADRMTLVVVLSACSQLGDFTLGKKILAY 261
Query: 103 MIHGLVCKLGLD-RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
M H L D ++V +G ALLDM Y++
Sbjct: 262 MDHHL-----FDVHSDVFLGNALLDM-------------------------------YLK 285
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G A ++F MPV++ +SW ++++G +G F+EAL FR MQ G++PD VT++ V
Sbjct: 286 CGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGV 345
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
LN+CAN+G L +G W+H Y+ K K + V N L+D+Y++CG I+ A VFQ M + +
Sbjct: 346 LNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDV 405
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
S+ ++IVGFA++G AL F+ M + G +PD V+ G L+ACSHAGL+E+G R+F
Sbjct: 406 YSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQD 465
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M ++Y + P+ EHYGC+VDL RAG + +A MP+ P+ V GSLL AC+ +
Sbjct: 466 MSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVE 525
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
L E +++ L++++P D Y+L++N+Y++ +W A K R+ MK I+K PG SSIE+
Sbjct: 526 LGETVIQKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVD 585
Query: 462 SGIHEFMAGDRSHIESEHIYS 482
+HEF G++SH +S + S
Sbjct: 586 GMVHEFRKGEKSHPKSREMIS 606
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 144/318 (45%), Gaps = 44/318 (13%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ +M L G +P+ T LL C+ S IH K GL N
Sbjct: 126 YRQMLLIGLSPDTYTLPYLLKACSQ--SHAFIEALQIHAHSIKTGLSSN----------- 172
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
F N ++ Y G IE+ ++FD+ P D ISWT L+
Sbjct: 173 ---------------------LFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLI 211
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ--D 245
+ K GY EA+ F M + D +T++ VL+AC+ +G +G I Y+ D
Sbjct: 212 QAYSKMGYPSEAIAAFFRMNCTA---DRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFD 268
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
+V + N L+D+Y +CG ARQ+F M + LVSWNS+I G A G EAL F
Sbjct: 269 VHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFR 328
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYS 363
MQ G KPD V+ G L +C++ G +E G + K + + + Y +VD+Y+
Sbjct: 329 RMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHM---KADGYVANALVDMYA 385
Query: 364 RAGRLEDALNVVENMPMK 381
+ G ++ A V + M K
Sbjct: 386 KCGSIDQAFMVFQAMKCK 403
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 142/337 (42%), Gaps = 79/337 (23%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W S IS G EA F RM G P+ +T + +L+ CA+ L LG
Sbjct: 301 VKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGD--LELG 358
Query: 102 AMIHGLVCKLGLDRNNV----MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
+H + D+N++ V AL+DMYAK G +D A +VF AM+ K +++ AMI
Sbjct: 359 KWVHSYI-----DKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIV 413
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
G+ G + A+ +F EMP GV PD+VT
Sbjct: 414 GFAMHGKADRALAIFSEMPRM-------------------------------GVRPDHVT 442
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++ VL+AC++ G L G ++ F+D ++ + L GC+
Sbjct: 443 LVGVLSACSHAGLLEEG--------RRHFQDMSRLYH-LQPQTEHYGCM----------- 482
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
++G A G + EA + N M PD + L AC +E G
Sbjct: 483 --------VDLLGRA--GLISEAEAFTNKMP---IVPDASVWGSLLGACKIHAKVELGE- 528
Query: 338 YFDIMKKIYRVSP-RIEHYGCIVDLYSRAGRLEDALN 373
+++K+ + P R Y + ++YS A R DAL
Sbjct: 529 --TVIQKLIEMEPERDGAYILMSNIYSSANRWRDALK 563
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 126/291 (43%), Gaps = 41/291 (14%)
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
F +R+M + G+ PD T+ +L AC+ L IH + +K N+ V NT
Sbjct: 119 FTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNT 178
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
L+ Y+ G IE +VF + L+SW ++I ++ G+ EA+ F M D
Sbjct: 179 LMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCTA---D 235
Query: 316 GVSFTGALTACSHAGLIEDG---LRYFD---------------------------IMKKI 345
++ L+ACS G G L Y D + +++
Sbjct: 236 RMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQL 295
Query: 346 YRVSP--RIEHYGCIVDLYSRAGRLEDALNV---VENMPMKPNEVVLGSLLAACRTKGDI 400
+ + P + + ++ + G ++AL++ ++ M +KP+ V L +L +C GD+
Sbjct: 296 FHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDL 355
Query: 401 ILAERLMKYLVDLDPGVDSNYV--LLANMYAAVGKWDGAGKIRRTMKGRGI 449
L + + Y +D + YV L +MYA G D A + + MK + +
Sbjct: 356 ELGKWVHSY-IDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDV 405
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/462 (37%), Positives = 261/462 (56%), Gaps = 28/462 (6%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W++ I+ + + G EA F +M L G+ PN +T I+LLS CA + L G I
Sbjct: 360 VITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGA--LSQGMEI 417
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H K L + L + +NA+ID Y +
Sbjct: 418 HAYSLKKCL--------------------LSLDNDFGGDGDGEDLMVYNALIDMYSKCRS 457
Query: 165 IESAVRMFDEMPVRD--AISWTALLNGFVKRGYFEEALECFREM--QISGVEPDYVTIIS 220
++A +FD +P R+ ++WT ++ G+ + G +AL+ F EM + V P+ TI
Sbjct: 458 FKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISC 517
Query: 221 VLNACANVGTLGIGLWIHRYVLKQ-DFKDNVK-VCNTLIDLYSRCGCIEFARQVFQRMHK 278
+L ACA++ L +G IH YV + +++ +V V N LID+YS+CG ++ AR VF M K
Sbjct: 518 ILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPK 577
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R VSW S++ G+ ++G EAL+ F+ MQK GF PD +SF L ACSH+G+++ GL Y
Sbjct: 578 RNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNY 637
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
FDIM++ Y V EHY C++DL +R GRL+ A ++ MPM+P+ V+ +LL+ACR
Sbjct: 638 FDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHS 697
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ LAE + LV++ D +Y L++N+YA +W +IR+ MK GI+K+PG S +
Sbjct: 698 NVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWV 757
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ G F GDRSH S IYS+LE L +K+ GYVPET
Sbjct: 758 QGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPET 799
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 205/384 (53%), Gaps = 35/384 (9%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALE-FTRMTL--HGTNPNH----ITFITLLSGC 90
++ ++ + W S ++ H + G ALE F+ M++ H N I+ + +L C
Sbjct: 211 TRKGIDDVISWNSIVAAHVK-GSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPAC 269
Query: 91 ADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF 150
A + L IH + G + V AL+D YAK G M+ A VF+ M K
Sbjct: 270 ASL--KALPQIKEIHSYAIRNG-TFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVV 326
Query: 151 TWNAMIDGYMRRGDIESAVRMFDEM-----PVRDAISWTALLNGFVKRGYFEEALECFRE 205
+WNAM+ GY + G+ +A +F+ M P+ D I+W+A++ G+ +RG +EAL+ F++
Sbjct: 327 SWNAMVTGYTQSGNFGAAFELFENMRKENIPL-DVITWSAVIAGYAQRGCSQEALDAFQQ 385
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF------------KDNVKVC 253
M + G EP+ VTIIS+L+ACA++G L G+ IH Y LK+ +++ V
Sbjct: 386 MILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVY 445
Query: 254 NTLIDLYSRCGCIEFARQVFQRM--HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
N LID+YS+C + AR +F + +R +V+W +I G+A G +AL+ F+ M +
Sbjct: 446 NALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKP 505
Query: 312 F--KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG-CIVDLYSRAGRL 368
+ P+ + + L AC+H + G + + + + P + C++D+YS+ G +
Sbjct: 506 YAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDV 565
Query: 369 EDALNVVENMPMKPNEVVLGSLLA 392
+ A NV ++MP K NEV S+++
Sbjct: 566 DTARNVFDSMP-KRNEVSWTSMMS 588
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 175/386 (45%), Gaps = 75/386 (19%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+ T +P V W + H + G + A RM GT P+H T L C + PS C
Sbjct: 108 RVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYC- 166
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK---SSFTWNAM 155
G +HGL+C G + +NV V AL+ MY++ G ++ A++VFD + K +WN++
Sbjct: 167 -CGRALHGLICCNGFE-SNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSI 224
Query: 156 IDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
+ +++ + +A+ +F EM + + + D
Sbjct: 225 VAAHVKGSNPRTALELFSEMSM-------------------------IVHEKATNERSDI 259
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
++I+++L ACA++ L IH Y ++ + VCN LID Y++CG + A +VF
Sbjct: 260 ISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNV 319
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M + +VSWN+++ G+ +G G A E F +M+KE D ++++ +
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAG---------- 369
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLA 392
Y++ G ++AL+ + M + +PN V + SLL+
Sbjct: 370 --------------------------YAQRGCSQEALDAFQQMILDGSEPNSVTIISLLS 403
Query: 393 ACRTKGDI-----ILAERLMKYLVDL 413
AC + G + I A L K L+ L
Sbjct: 404 ACASLGALSQGMEIHAYSLKKCLLSL 429
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 113/242 (46%), Gaps = 22/242 (9%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
++ Y+ G + A+ + + + A+ W L+ +K G+ + A+ M +G +PD
Sbjct: 89 VVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPD 148
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+ T+ L AC + + G +H + F+ NV VCN L+ +YSRCG +E A VF
Sbjct: 149 HFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFD 208
Query: 275 RMHKR---TLVSWNSIIVGFAVNGFVGEALEYFNSM------QKEGFKPDGVSFTGALTA 325
+ ++ ++SWNSI+ ALE F+ M + + D +S L A
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPA 268
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPR----IEHYGC--IVDLYSRAGRLEDALNVVENMP 379
C+ L+ +K+I+ + R + + C ++D Y++ G + DA+ V M
Sbjct: 269 CA-------SLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVME 321
Query: 380 MK 381
K
Sbjct: 322 FK 323
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/478 (36%), Positives = 266/478 (55%), Gaps = 67/478 (14%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ TF L CA + ++ G IH V +G + + TAL+DMYAKFG+MD A
Sbjct: 86 PDSFTFSVLAKSCA--LNMAIWEGQEIHSHVVAVGFCLD-LYAATALVDMYAKFGKMDCA 142
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIE------------------------------- 166
+FD M +S +W A+I GY+R GD++
Sbjct: 143 RKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMC 202
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFE----------------------------- 197
SA ++FDEMP R +SWT ++ G+ G +
Sbjct: 203 SARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYRQNKQ 262
Query: 198 --EALECFREMQ-ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
EAL+ F EMQ + +EPD VTI+SVL A A++G L +G W+HR+V ++ V
Sbjct: 263 PYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGT 322
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
LID+Y++CG I +R VF M ++ SWN++I FA+NG EAL F M +GF P
Sbjct: 323 ALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMP 382
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
+ ++ G L+AC+H+GL+E+G R+F M++ + ++P+IEHYGC+VDL RAG L++A +
Sbjct: 383 NEITMIGVLSACNHSGLVEEGKRWFKAMEE-FGLTPKIEHYGCMVDLLGRAGCLQEAEKL 441
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
+E+MP + N ++L S L AC D+ AER++K + ++ D NY++L N+YA +W
Sbjct: 442 MESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRW 501
Query: 435 DGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
A +++ M+ G++K+ G S+IE+ S + EF+AGDR H + E I+S+L L +K
Sbjct: 502 KEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKWEAIHSVLGQLWVHMK 559
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 35/230 (15%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
W + IS + ++ + EA F M + P+ +T +++L AD + L LG +H
Sbjct: 250 WNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGA--LDLGGWVHR 307
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
V + LDR VGTAL+DMYAK G + + VFD M K + +WNA+I
Sbjct: 308 FVRRKKLDRA-TNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALI---------- 356
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
N F G +EAL F EM G P+ +T+I VL+AC
Sbjct: 357 ---------------------NAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACN 395
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+ G + G + + + ++ ++DL R GC++ A ++ + M
Sbjct: 396 HSGLVEEGKRWFKAMEEFGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESM 445
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 24/296 (8%)
Query: 165 IESAVRMFDEMPVRD-AISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVL 222
I A RMFD P RD A +++ +V + E+ +R+++ + PD T +
Sbjct: 36 IVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLA 95
Query: 223 NACANVGTLGIGLW----IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+CA L + +W IH +V+ F ++ L+D+Y++ G ++ AR++F M
Sbjct: 96 KSCA----LNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMID 151
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R+ VSW ++I G+ +G + A + F+ M + D +F + A G + +
Sbjct: 152 RSQVSWTALIGGYVRSGDMDNAGKLFDQM----IEKDSAAFNTMIDAYVKLGDMCSARKL 207
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
FD M + VS I YG YS G L+ A ++ + MP K N ++++ R
Sbjct: 208 FDEMPERSVVSWTIMIYG-----YSSNGNLDSARSLFDAMPEK-NLFSWNAMISGYRQNK 261
Query: 399 DIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQK 451
A +L M+ L+P + V + A +G D G + R ++ + + +
Sbjct: 262 QPYEALKLFHEMQSTTSLEPD-EVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDR 316
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 255/454 (56%), Gaps = 34/454 (7%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+ T +V W S I+ + G+ +A + + G P+ T I+LLS C + L
Sbjct: 215 QKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQ--PEAL 272
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G +IHG +LG D + ++ N +I
Sbjct: 273 IYGFLIHGHGFQLGCDSDISLI--------------------------------NTLISM 300
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y R GDI SA +FD M +R +SWTA+++G+ + G ++AL F M+ +G +PD VT+
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+S+++ C G LG+G WI Y + K +V VCN LID+Y++CG + AR++F +
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPN 420
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
RT+VSW ++I A+NG EAL+ F+ + + G +P+ ++F L AC H G +E G
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F +M + Y ++P ++HY C++DL R G+L +AL V+++MPMKP+E + G+LL AC+
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ + E + +YL +L P V ++V +AN+YA+VG+WD +R+TM+ ++K PG S +
Sbjct: 541 NMEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVV 600
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
++ H F DRSH +S IY L L+ +K
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMK 634
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 190/458 (41%), Gaps = 82/458 (17%)
Query: 34 QTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADF 93
Q N S ++ W SSI G ++A F ++ L+G PN+ TF L CA
Sbjct: 6 QHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKL 65
Query: 94 PSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWN 153
L +IH V K D+Y +
Sbjct: 66 SH--LTNSQIIHTHVVK----------SPFYSDIYVQ----------------------T 91
Query: 154 AMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEP 213
AM+D Y++ G ++ A +FD+MPVR+ SW A++ GF + G + F M++ G P
Sbjct: 92 AMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRP 151
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
D T+I + A + +L +H ++ + V NT I YS+CG ++ A+ VF
Sbjct: 152 DAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVF 211
Query: 274 QRMHK--RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC----- 326
+ K R+ VSWNS+I +A G +A++ + + +GFKPD + L++C
Sbjct: 212 HGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEA 271
Query: 327 ------------------------------SHAGLIEDGLRYFDIMKKIYRVSPRIEHYG 356
S G I FD M VS +
Sbjct: 272 LIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVS-----WT 326
Query: 357 CIVDLYSRAGRLEDAL---NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKY--LV 411
++ YS GR++DAL N +E KP+ V + SL++ C G + L + Y L
Sbjct: 327 AMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLH 386
Query: 412 DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+L V L+ +MYA G + A +I ++ R +
Sbjct: 387 ELKKDVVVCNALI-DMYAKCGSLNDAREIFYSLPNRTV 423
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 173/384 (45%), Gaps = 36/384 (9%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K V W + I + G + F M L GT P+ T I L A ++ L
Sbjct: 112 KMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTR--AVISAKSL 169
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
+H + + GLD + V + Y+K G + LA +VF +
Sbjct: 170 RFLKAVHAIGIETGLDADTS-VSNTWIAAYSKCGELQLAKMVFHGI-------------- 214
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+ R ++SW +L+ + G + +A++ ++ + G +PD TI
Sbjct: 215 ---------------QKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTI 259
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
IS+L++C L G IH + + ++ + NTLI +YSRCG I A +F M
Sbjct: 260 ISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSI 319
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
RT VSW ++I G++ G V +AL FN+M++ G KPD V+ ++ C G + G +
Sbjct: 320 RTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLG-HW 378
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
D ++ + + ++D+Y++ G L DA + ++P + V +++AAC G
Sbjct: 379 IDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNR-TVVSWTAMIAACALNG 437
Query: 399 DIILAERLMKYLVDLDPGVDSNYV 422
+ A L L + G++ N +
Sbjct: 438 EFREALDLFSLLS--ESGIEPNNI 459
>gi|255584555|ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527215|gb|EEF29379.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 160/438 (36%), Positives = 252/438 (57%), Gaps = 3/438 (0%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
T+ I R R R EA F+RM L PN TF T++ + ++LG +H
Sbjct: 68 TTLIGRFARQHRYEEAMCLFSRMLLLNIKPNEFTFATVIHSSTGLKN--IYLGKQLHART 125
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
K+GL+ V VG+A+LD YAK + A F+ ++ + ++ +I GY+++G I+ A
Sbjct: 126 MKMGLN-TIVFVGSAMLDFYAKLCSFEEARNAFEDIQKPNVVSYTTLIHGYLKKGKIDDA 184
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
+++F EMP R+ +SW A++ GF + G+ EEA+ F EM G P+ T + + AN+
Sbjct: 185 LQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQSTFPCAITSAANM 244
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
+LG+G H +K +V VCN+L+ Y++CG +E + VF + R VSWN++I
Sbjct: 245 ASLGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNELPDRNTVSWNAVI 304
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
GFA NG +A+ +F M+ G +P+ V+ G L AC+HAGL+E G YF+ M++
Sbjct: 305 CGFAQNGRGEDAVIFFERMRAAGLRPNSVTLLGLLCACNHAGLVEKGYMYFNQMRQEEPG 364
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
+ EHY C+VDL SR GRL++A + ++P P +LL C + L++ +
Sbjct: 365 ILKPEHYACMVDLLSRFGRLKEAAKFLHDLPFDPGTGFWKALLGGCHIHSNAELSDLAAQ 424
Query: 409 YLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFM 468
++ LDP S+YV+L+N Y+A G+W IRR MK +G+++ PG S IE+ S IH F+
Sbjct: 425 KILALDPEDVSSYVMLSNAYSAAGRWQQVSTIRREMKEKGLKRIPGCSWIEVRSKIHVFL 484
Query: 469 AGDRSHIESEHIYSMLEL 486
D++H + E IYS L+
Sbjct: 485 NSDKNHHQKEEIYSFLKF 502
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 145/341 (42%), Gaps = 76/341 (22%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+FDEMP D +S T L+ F ++ +EEA+ F M + ++P+ T +V+++ +
Sbjct: 55 LFDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRMLLLNIKPNEFTFATVIHSSTGLKN 114
Query: 231 LGIGLWIHRYVLKQ-------------DF------------------KDNVKVCNTLIDL 259
+ +G +H +K DF K NV TLI
Sbjct: 115 IYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFEDIQKPNVVSYTTLIHG 174
Query: 260 YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
Y + G I+ A Q+FQ M +R +VSWN+++ GF+ G EA+ F M +EGF P+ +F
Sbjct: 175 YLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQSTF 234
Query: 320 TGALTACS-----------HA------------------------GLIEDGLRYFDIMKK 344
A+T+ + HA G +ED L F+ +
Sbjct: 235 PCAITSAANMASLGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNELPD 294
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDII 401
VS + ++ +++ GR EDA+ E M ++PN V L LL AC G +
Sbjct: 295 RNTVS-----WNAVICGFAQNGRGEDAVIFFERMRAAGLRPNSVTLLGLLCACNHAGLVE 349
Query: 402 LAERLMKYLVDLDPGV--DSNYVLLANMYAAVGKWDGAGKI 440
+ +PG+ +Y + ++ + G+ A K
Sbjct: 350 KGYMYFNQMRQEEPGILKPEHYACMVDLLSRFGRLKEAAKF 390
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 41/224 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + + + G EA F M G PN TF ++ A+ S L +G
Sbjct: 196 VVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQSTFPCAITSAANMAS--LGMGKSF 253
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H K L ++V V +L+ YAK G M+ + +VF+ + +++ +WNA+I G+ + G
Sbjct: 254 HACAVK-SLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNELPDRNTVSWNAVICGFAQNGR 312
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
E AV F+ M+ +G+ P+ VT++ +L A
Sbjct: 313 GEDAVIFFE-------------------------------RMRAAGLRPNSVTLLGLLCA 341
Query: 225 CANVGTLGIGLWIHRYVLKQD----FKDNVKVCNTLIDLYSRCG 264
C + G + G +++ ++Q+ K C ++DL SR G
Sbjct: 342 CNHAGLVEKG-YMYFNQMRQEEPGILKPEHYAC--MVDLLSRFG 382
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/470 (36%), Positives = 261/470 (55%), Gaps = 37/470 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + IS + +SGR EA + F M PN T + +LS C S LG
Sbjct: 225 VKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSG--ELG 282
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
I V G N + NA+ID Y +
Sbjct: 283 KWIGSWVRDNGFGSNLQLT--------------------------------NALIDMYCK 310
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G+ + A +FD + +D ISW ++ G+ +EEAL F M S V+P+ VT + +
Sbjct: 311 CGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGI 370
Query: 222 LNACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
L+ACA +G L +G W+H Y+ K N + +LID+Y++CGCIE A +VF+ MH R
Sbjct: 371 LHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRN 430
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYF 339
L SWN+++ GFA++G AL F+ M +G F+PD ++F G L+AC+ AGL++ G +YF
Sbjct: 431 LASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYF 490
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M + Y +SP+++HYGC++DL +RA + E+A +++NM M+P+ + GSLL+AC+ G
Sbjct: 491 RSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGR 550
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ E + + L L+P +VLL+N+YA G+WD +IR + +G++K PG +SIE
Sbjct: 551 VEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIE 610
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
I +HEF+ GD+ H E +IY ML + L+ G+VP T + LY+ D
Sbjct: 611 IDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNT-SEVLYDMD 659
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 134/478 (28%), Positives = 236/478 (49%), Gaps = 46/478 (9%)
Query: 8 TILPQPFLPH--QQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAA 65
T+ Q L H +P+ +L+ +S+ N + + W S I + S +
Sbjct: 59 TVFVQSKLIHFCAVSPSGDLSYA--LSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSL 116
Query: 66 LEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALL 125
F+RM +G PN TF L C ++ G +H KL L N V T+++
Sbjct: 117 HLFSRMLYYGVQPNSHTFPFLFKSCT--KAKATHEGKQLHAHALKLAL-HFNPHVHTSVI 173
Query: 126 DMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTA 185
MYA G MD A +VFD ++ + ++ A+I GY+ +G ++ A R+FDE+PV+D +SW A
Sbjct: 174 HMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNA 233
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
+++G+V+ G FEEA+ CF EMQ + V P+ T++ VL+AC + + +G WI +V
Sbjct: 234 MISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNG 293
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
F N+++ N LID+Y +CG + AR++F + ++ ++SWN++I G++ EAL F
Sbjct: 294 FGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFE 353
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
M + KP+ V+F G L AC+ G ++ G + K R S + ++D+Y++
Sbjct: 354 VMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKC 413
Query: 366 GRLEDALNVVENMP-----------------------------------MKPNEVVLGSL 390
G +E A V +M +P+++ +
Sbjct: 414 GCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGV 473
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVD---SNYVLLANMYAAVGKWDGAGKIRRTMK 445
L+AC G + L + + ++ D G+ +Y + ++ A K++ A + + M+
Sbjct: 474 LSACTQAGLVDLGHQYFRSMIQ-DYGISPKLQHYGCMIDLLARAEKFEEAEILMKNME 530
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/464 (36%), Positives = 262/464 (56%), Gaps = 37/464 (7%)
Query: 40 STVNPT--VQWTSSISRHCRSGRIAEA-ALEFTRMTLHGTNPNHITFITLLSGCADFPSQ 96
+TVN V W++ I + I++A AL + ++G NP T T+L CA
Sbjct: 269 NTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTD- 327
Query: 97 CLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMI 156
L G +H + K G+D + VG +L+ MYAK G MD
Sbjct: 328 -LKRGKKLHCHMIKSGMDLDTT-VGNSLISMYAKCGIMD--------------------- 364
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
+AV DEM +D +S++A+++G V+ GY E+AL FR+MQ SG+ P
Sbjct: 365 ----------NAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLE 414
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T+I++L AC+++ L G H Y + + F ++ +CN +ID+YS+CG I +R++F RM
Sbjct: 415 TMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRM 474
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
R ++SWN++I+G+ ++G EAL F +Q G KPD V+ L+ACSH+GL+ +G
Sbjct: 475 QNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGK 534
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+F M + + + PR+ HY C+VDL +RAG L++A ++ MP PN + G+LLAACRT
Sbjct: 535 YWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRT 594
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
+I + E++ K + L P N+VL++N+Y++VG+WD A IR + G +K PG S
Sbjct: 595 HKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCS 654
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+EI IH F+ G +SH +S I L+ L +K GY ++
Sbjct: 655 WVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADS 698
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 163/355 (45%), Gaps = 37/355 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W I + SG ++ + M G P + TF LL C+ Q L LG +IH
Sbjct: 73 VLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSL--QALQLGRLIH 130
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
LGL + + V TALL MYAK G + A +F+++ +
Sbjct: 131 THAHILGLSMD-LYVSTALLHMYAKCGHLYQAQTLFNSISHQD----------------- 172
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
RD ++W A++ F + + +MQ +GV P+ T++S+L
Sbjct: 173 ------------RDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTI 220
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
L G IH Y ++ F DNV + L+D+Y++C + +AR++F ++K+ V W+
Sbjct: 221 GQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWS 280
Query: 286 SIIVGFAVNGFVGEALEYFNSMQ-KEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMK 343
++I G+ ++ + +AL ++ M G P + L AC+ ++ G + + ++K
Sbjct: 281 AMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIK 340
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
+ + ++ +Y++ G +++A+ ++ M K + V ++++ C G
Sbjct: 341 SGMDLDTTVG--NSLISMYAKCGIMDNAVGFLDEMIAK-DTVSYSAIISGCVQNG 392
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 135/319 (42%), Gaps = 43/319 (13%)
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
++ R +I+ A +FD++P + W ++ + G F++++ + M GV P T
Sbjct: 51 HISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTF 110
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-- 276
+L AC+++ L +G IH + ++ V L+ +Y++CG + A+ +F +
Sbjct: 111 PFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISH 170
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG- 335
R +V+WN++I F+ + + + MQ+ G P+ + L A + G
Sbjct: 171 QDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGK 230
Query: 336 ------LRYFDIMKKIYRVSPRIEHYGCIVDLYSRA-----------------------G 366
+R F + + + + C + Y+R
Sbjct: 231 AIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHD 290
Query: 367 RLEDALNVVENM----PMKPNEVVLGSLLAACRTKGDIILAERLMKYLV----DLDPGVD 418
+ DAL + ++M + P L ++L AC D+ ++L +++ DLD V
Sbjct: 291 SISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVG 350
Query: 419 SNYVLLANMYAAVGKWDGA 437
++ L +MYA G D A
Sbjct: 351 NS---LISMYAKCGIMDNA 366
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/430 (38%), Positives = 255/430 (59%), Gaps = 10/430 (2%)
Query: 78 PNHITFITLLSGCADF--PSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD-MYAKFGRM 134
PN T+ T++ G A+ PS + L + +H L + A+ M G
Sbjct: 98 PNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEG 157
Query: 135 DLATVV---FDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
+ VV FD++R F N+++ Y G + SA ++F+ M RD ++W +++NGF
Sbjct: 158 IHSVVVRNGFDSLR----FVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFA 213
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
G EAL +REM GVEPD T++S+L+AC +G L +G +H Y++K N
Sbjct: 214 LNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQH 273
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
N L+DLYS+CG A++VF M +R++VSW S+IVG AVNG EAL+ F ++++G
Sbjct: 274 ASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQG 333
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
KP ++F G L ACSH G++++G YF MK+ Y + PRIEH+GC+VDL RAG++ DA
Sbjct: 334 LKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDA 393
Query: 372 LNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAV 431
+ + NMP+ PN V+ +LL AC G + L E + L+ ++VLL+N+YA+
Sbjct: 394 YDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASE 453
Query: 432 GKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
+W +R+ M +G++K PG S +E+ + ++EF+ GDRSH +SE Y+ML ++ L
Sbjct: 454 RRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLL 513
Query: 492 KLCGYVPETV 501
K+ GYVP TV
Sbjct: 514 KIEGYVPRTV 523
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 107/212 (50%), Gaps = 2/212 (0%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTIISVLNACA 226
A ++F+++ + +W ++ GF + A+E F +M S + PD T + A A
Sbjct: 88 AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ + +G IH V++ F V N+L+ +YS G + A QVF+ M R V+WNS
Sbjct: 148 KLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNS 207
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I GFA+NG EAL + M EG +PDG + L+AC G + G R M K+
Sbjct: 208 VINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVG 267
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
V + ++DLYS+ G DA V + M
Sbjct: 268 LVQNQ-HASNALLDLYSKCGNFRDAQKVFDEM 298
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 153/388 (39%), Gaps = 87/388 (22%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ +G EA + M G P+ T ++LLS C + + L LG +H
Sbjct: 203 VAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGA--LALGERVH 260
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K+GL +N ALLD+Y+K G A VFD M +S +W ++I
Sbjct: 261 MYMVKVGLVQNQ-HASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIV-------- 311
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
G G EAL+ F E++ G++P +T + VL AC
Sbjct: 312 -----------------------GLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYAC 348
Query: 226 ANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
++ G L G + R + ++ ++DL R G
Sbjct: 349 SHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGK------------------- 389
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK- 343
VG+A +Y +M P+ V + L AC+ G +E G ++ +
Sbjct: 390 ------------VGDAYDYIRNMP---VPPNAVIWRTLLGACTIHGHLELG----EVARA 430
Query: 344 KIYRVSPRIEHYGCIV---DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK-GD 399
+I R+ R H G V +LY+ R D NV + M MK + G L + + +
Sbjct: 431 EIQRLEQR--HSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYE 488
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANM 427
I+ +R P + Y +LA +
Sbjct: 489 FIMGDR-------SHPQSEETYAMLAKI 509
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 49/236 (20%)
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ-KEGFKP 314
+ L S + FA Q+F ++ + +WN++I GFA + A+E F+ M P
Sbjct: 75 IFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILP 134
Query: 315 DGVSFTGALTACS-----------HAGLIEDG---LRY---------------------F 339
D +F A + H+ ++ +G LR+ F
Sbjct: 135 DTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVF 194
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRT 396
+IM RV+ + +++ ++ G +AL + M ++P+ + SLL+AC
Sbjct: 195 EIMSYRDRVA-----WNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVE 249
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYV---LLANMYAAVGKWDGAGKIRRTMKGRGI 449
G + L ER+ Y+V + G+ N L ++Y+ G + A K+ M+ R +
Sbjct: 250 LGALALGERVHMYMVKV--GLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSV 303
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 260/447 (58%), Gaps = 10/447 (2%)
Query: 66 LEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALL 125
L ++ M + PN+ TF +LL C G IH + K G ++V + + L+
Sbjct: 111 LLYSHMLQNSVLPNNFTFPSLLIACRKIQH-----GMQIHAHLFKFGFGAHSVCLNS-LI 164
Query: 126 DMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTA 185
MY F ++ A VF + S +W ++I GY + G I+ A +F MP +++ SW A
Sbjct: 165 HMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNA 224
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEP-DYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
++ +V+ F EA F M+ D ++L+AC +G L G WIH Y+ +
Sbjct: 225 MMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRN 284
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK--RTLVSWNSIIVGFAVNGFVGEALE 302
+ + K+ ++D+Y +CGC+E A QVF + R + SWN +I G A++G A++
Sbjct: 285 GIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQ 344
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M+++ PD ++F LTAC+H+GL+E+G YF M ++Y + PR+EH+GC+VDL
Sbjct: 345 LFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLL 404
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
RAG + +A +++ MP+ P+ VLG+LL AC+ +I L E + + +++L+P YV
Sbjct: 405 GRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEIGRRVIELEPNNSGRYV 464
Query: 423 LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS 482
LLAN+YA GKW+ A K+R+ M RG++K PG S IE+ +HEF+AG+R+H +++ +++
Sbjct: 465 LLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQGTVHEFIAGERNHPQAKELHA 524
Query: 483 MLELLSFDLKLCGYVPETVAGELYEND 509
+ + LK GYV +T G L+ +D
Sbjct: 525 KVYEMLEHLKSVGYVADT-NGVLHGHD 550
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 32/244 (13%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYF--EEALECFREMQISGVEPDYVTIISVLNAC 225
A+++FD +P DA + ++ GF+ L + M + V P+ T S+L AC
Sbjct: 76 ALKLFDSIPQPDAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIAC 135
Query: 226 ----------ANVGTLGIGL-------WIHRYVLKQDFKDNVKVCNT-----------LI 257
A++ G G IH YV Q ++ +V +T LI
Sbjct: 136 RKIQHGMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLI 195
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP-DG 316
YS+ G I+ A +FQ M ++ SWN+++ + EA F+ M+ E D
Sbjct: 196 SGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDK 255
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
T L+AC+ G ++ G + +K+ + + IVD+Y + G LE AL V
Sbjct: 256 FVATTMLSACTGLGALDQGKWIHEYIKR-NGIELDSKLTTAIVDMYCKCGCLEKALQVFH 314
Query: 377 NMPM 380
++P+
Sbjct: 315 SLPL 318
>gi|356565111|ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 182/473 (38%), Positives = 269/473 (56%), Gaps = 18/473 (3%)
Query: 43 NPTVQ-WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NPT W I + RS +A +T M P+ T +LLS CA + G
Sbjct: 3 NPTTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACAR--GGLVKEG 60
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H V G +NV V T+L+ YA G ++ A VFD M +S +WN+M+ GY+R
Sbjct: 61 EQVHATVLVKGYC-SNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVR 119
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
D + A R+FD MP R+ +SWT ++ G + G +AL F EM+ + VE D V +++
Sbjct: 120 CADFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAA 179
Query: 222 LNACANVGTLGIGLWIHRYVLKQDF------KDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
L+ACA +G L +G WIH YV +Q F + +V++ N LI +Y+ CG + A QVF +
Sbjct: 180 LSACAELGDLKLGRWIHWYV-QQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVK 238
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK-----PDGVSFTGALTACSHAG 330
M +++ VSW S+I+ FA G EAL+ F +M +G K PD ++F G L ACSHAG
Sbjct: 239 MPRKSTVSWTSMIMAFAKQGLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCACSHAG 298
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
+++G + F MK + +SP IEHYGC+VDL SRAG L++A ++E MP+ PN+ + G+L
Sbjct: 299 FVDEGHQIFASMKHTWGISPSIEHYGCMVDLLSRAGLLDEARGLIETMPLNPNDAIWGAL 358
Query: 391 LAACRTKGDIILAERLMKYLV-DLDPGVDSNY-VLLANMYAAVGKWDGAGKIRRTMKGRG 448
L CR + LA ++ LV +L+ + Y VLL+N+YA +W +R+ M G
Sbjct: 359 LGGCRIHRNSELASQVENKLVPELNGDQAAGYLVLLSNIYAFGQRWQDVITVRQKMIEMG 418
Query: 449 IQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
++K PG S I+I +H F+AGD +H S IY L ++ L GY E +
Sbjct: 419 VKKPPGRSWIQINGVVHNFIAGDMTHKHSSFIYETLRDVTKQANLEGYDREII 471
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M T WN +I G+A + +A+E + M +PDG + + L+AC+ GL+++G
Sbjct: 1 MDNPTTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEG 60
Query: 336 LR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
+ + ++ K Y + ++ ++ Y+ G +E A +V + MP + + V S+LA
Sbjct: 61 EQVHATVLVKGYCSNVFVD--TSLITFYAGRGGVERARHVFDGMPQR-SVVSWNSMLAGY 117
Query: 395 RTKGDIILAERLMKYL 410
D A R+ +
Sbjct: 118 VRCADFDGARRVFDVM 133
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 264/461 (57%), Gaps = 36/461 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + IS + +G EA F M P+ T +T+LS CA S + LG
Sbjct: 197 VKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQ--SASIELG 254
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + G N +V NA+ID Y++
Sbjct: 255 RQVHSWIDDHGFGSNLKIV--------------------------------NALIDLYIK 282
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++E+A +F+ + +D ISW L+ G+ ++EAL F+EM SG P+ VT++S+
Sbjct: 283 CGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSI 342
Query: 222 LNACANVGTLGIGLWIHRYVLK--QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACA++G + IG WIH Y+ K + + + +LID+Y++CG IE A+QVF M R
Sbjct: 343 LPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNR 402
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+L SWN++I GFA++G A + F+ M+K+G +PD ++F G L+ACSH+G+++ G F
Sbjct: 403 SLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIF 462
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M + Y+++P++EHYGC++DL +G ++A ++ +M M P+ V+ SLL AC+ G+
Sbjct: 463 RSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGN 522
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E + L+ ++P +YVLL+N+YA G+W+ K R + +G++K PG SSIE
Sbjct: 523 VELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIE 582
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I S +HEF+ GD+ H + IY MLE + L+ G+VP+T
Sbjct: 583 IDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDT 623
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/333 (36%), Positives = 185/333 (55%), Gaps = 6/333 (1%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + H S A + M G PN TF LL CA S+ G IHG
Sbjct: 71 WNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACA--KSKAFREGQQIHGH 128
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG D + + V T+L+ MY K GR + A VFD + ++ A+I GY G I S
Sbjct: 129 VLKLGCDLD-LYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXS 187
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +MFDE+PV+D +SW AL++G+ + G ++EALE F+EM + V+PD T+++VL+ACA
Sbjct: 188 AQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQ 247
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
++ +G +H ++ F N+K+ N LIDLY +CG +E A +F+ + + ++SWN++
Sbjct: 248 SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTL 307
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KKI 345
I G+ EAL F M + G P+ V+ L AC+H G I+ G R+ + K++
Sbjct: 308 IGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIG-RWIHVYIDKRL 366
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
VS ++D+Y++ G +E A V ++M
Sbjct: 367 KGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM 399
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 167/415 (40%), Gaps = 56/415 (13%)
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD---MYAKFGRMD 135
NH + ++LL C S +IH + K GL N + + L++ + F +
Sbjct: 2 NHPS-LSLLHNCKTLQSL-----RIIHAKMIKTGLHNTNYAL-SKLIEFSVLSPHFDGLT 54
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP----VRDAISWTALLNGFV 191
A VFD+++ + WN M G+ D SA+ ++ M V ++ ++ LL
Sbjct: 55 YAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACA 114
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
K F E + + G + D S++ G R V Q +V
Sbjct: 115 KSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDA----RKVFDQSSHRDVV 170
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
LI Y+ G I A+++F + + +VSWN++I G+A G EALE F M K
Sbjct: 171 SYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTN 230
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
KPD + L+AC+ + IE G + + + ++ ++DLY + G +E A
Sbjct: 231 VKPDESTMVTVLSACAQSASIELGRQVHSWIDD-HGFGSNLKIVNALIDLYIKCGEVETA 289
Query: 372 LNVVENMPMK----------------------------------PNEVVLGSLLAACRTK 397
+ E + K PNEV + S+L AC
Sbjct: 290 SGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHL 349
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
G I + + Y+ GV + L L +MYA G + A ++ +M R +
Sbjct: 350 GAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSL 404
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 250/412 (60%), Gaps = 7/412 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F + L G P+ +F +L + + +G IH GLD + +V T+L+ M
Sbjct: 115 FNAIRLLGMPPDSYSFPFVLKAVVCLSA--VHVGKQIHCQAIVSGLDSHPSVV-TSLVQM 171
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV--RDAISWTA 185
Y+ + A +FD K + WNAM+ GY + G++ +A +F+ MP RD +SWT
Sbjct: 172 YSSCAHLSSARKLFDGATFKHAPLWNAMLAGYAKVGNMSNARNLFECMPEKDRDVVSWTT 231
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
L++G+ + EA+ FR M + V+PD + I++VL+ACA++G L +G WIH Y+ K +
Sbjct: 232 LISGYTQTHSPNEAITLFRIMLLQNVQPDEIAILAVLSACADLGALQLGEWIHNYIEKHN 291
Query: 246 --FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
+ V +CN+LID+Y++ G I ARQ+FQ M +T+++W ++I G A++GF EAL+
Sbjct: 292 NKLRKTVPLCNSLIDMYAKSGDISKARQLFQNMKHKTIITWTTVISGLALHGFGKEALDV 351
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F+ M+K KP+ V+ L+ACSH GL+E G F M+ Y + P+IEHYGC++DL
Sbjct: 352 FSCMEKARVKPNEVTLIAVLSACSHVGLVELGRNIFTSMRSKYGIEPKIEHYGCMIDLLG 411
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
RAG L++A+ +V MP + N V GSLL+A GD LA +++L L+P NY L
Sbjct: 412 RAGYLQEAMELVRVMPSEANAAVWGSLLSASNRYGDAALAAEALRHLSVLEPHNCGNYSL 471
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
L+N YAA+G W A +R+ M+ +K PG+S +E+ + ++EF+AGD+ +I
Sbjct: 472 LSNTYAALGWWKEAAMVRKVMRDTCAEKVPGVSFVELNNRVYEFIAGDKLNI 523
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 165/462 (35%), Positives = 257/462 (55%), Gaps = 34/462 (7%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K ++ V WT+ I+ + G+ A F RM +PN TF ++SGCA+ +
Sbjct: 277 KMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLAR--I 334
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G +H L+ LGL ++ V +++ MYAK G++ ++V+
Sbjct: 335 EWGEQLHALILHLGL-AASLSVENSIMTMYAKCGQLTSSSVI------------------ 375
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
F EM RD +SW+ ++ G+ + G+ EA E M++ G +P +
Sbjct: 376 -------------FHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFAL 422
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
SVL+AC N+ L G +H YVL + V + LI++Y +CG IE A ++F
Sbjct: 423 ASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAEN 482
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+VSW ++I G+A +G+ E ++ F + + G +PD V+F G L+ACSHAGL++ G Y
Sbjct: 483 DDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHY 542
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F+ M K Y++SP EHYGC++DL RAGRL DA +++E MP ++VV +LL ACR G
Sbjct: 543 FNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHG 602
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
D+ R + ++ L+P ++ LAN+YA+ GKW A IR+ MK +G+ K+PG S I
Sbjct: 603 DVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWI 662
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
++ + F+AGDRSH + E IY+ML+LL+ +L V ET
Sbjct: 663 KVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQET 704
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 210/479 (43%), Gaps = 78/479 (16%)
Query: 2 NSSATATILPQPFLPHQQNPNQNLTTTPQI-SIQTNNSKSTVNPTVQWTSSISRHCRSGR 60
N S + Q LP + L T + + + K + + WT+ IS + +
Sbjct: 36 NLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNAND 95
Query: 61 IAEAALEFTRMTLHG---TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNN 117
+EA L F M + +P FI L+ A + + G ++HG K GL N+
Sbjct: 96 SSEALLLFKNMRVESGLRIDP----FILSLAHKACGLNSDVNYGELLHGYAVKTGL-VNS 150
Query: 118 VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV 177
V VG+ALLDM Y + G I R+F EMP+
Sbjct: 151 VFVGSALLDM-------------------------------YTKNGKIFEGRRVFHEMPM 179
Query: 178 RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWI 237
R+ +SWTA++ G V+ GY +EAL F EM S VE D T L ACA+ G L G I
Sbjct: 180 RNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREI 239
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
H +K+ F + V NTL +Y++CG +E+ +F++M R +VSW +II G
Sbjct: 240 HAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQE 299
Query: 298 GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI------------ 345
A++ F M++ P+ +F ++ C++ IE G + ++ +
Sbjct: 300 ECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSI 359
Query: 346 -----------------YRVSPR-IEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNE 384
+ ++ R I + I+ Y + G + +A ++ M M KP E
Sbjct: 360 MTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTE 419
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLA---NMYAAVGKWDGAGKI 440
L S+L+AC + ++L Y++ + G++ ++L+ NMY G + A +I
Sbjct: 420 FALASVLSACGNMAILEHGKQLHAYVLSI--GLEHTAMVLSALINMYCKCGSIEEASRI 476
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 156/335 (46%), Gaps = 43/335 (12%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I+ R+G EA + F+ M + TF L CAD S L G IH
Sbjct: 183 VSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACAD--SGALNYGREIH 240
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
K G D SSF N + Y + G +
Sbjct: 241 AQAMKKGFD--------------------------------VSSFVANTLATMYNKCGKL 268
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E + +F++M +RD +SWT ++ V+ G E A++ F M+ S V P+ T +V++ C
Sbjct: 269 EYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGC 328
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN+ + G +H +L ++ V N+++ +Y++CG + + +F M +R +VSW+
Sbjct: 329 ANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWS 388
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+II G+ G V EA E + M+ EG KP + L+AC + ++E G +
Sbjct: 389 TIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQL-----HA 443
Query: 346 YRVSPRIEH----YGCIVDLYSRAGRLEDALNVVE 376
Y +S +EH ++++Y + G +E+A + +
Sbjct: 444 YVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFD 478
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 167/430 (38%), Positives = 255/430 (59%), Gaps = 10/430 (2%)
Query: 78 PNHITFITLLSGCADF--PSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD-MYAKFGRM 134
PN T+ T++ G A+ PS + L + +H L + A+ M G
Sbjct: 98 PNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEG 157
Query: 135 DLATVV---FDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
+ VV FD++R F N+++ Y G ESA ++F+ M RD ++W +++NGF
Sbjct: 158 IHSVVVRNGFDSLR----FVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFA 213
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
G EAL +REM GVEPD T++S+L+AC +G L +G +H Y++K N
Sbjct: 214 LNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQH 273
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
N L+DLYS+CG A++VF M +R++VSW S+IVG AVNG EAL+ F ++++G
Sbjct: 274 ASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQG 333
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
KP ++F G L ACSH G++++G YF MK+ Y + PRIEH+GC+VDL RAG++ DA
Sbjct: 334 LKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDA 393
Query: 372 LNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAV 431
+ + NMP+ PN V+ +LL AC G + L E + L+ ++VLL+N+YA+
Sbjct: 394 YDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASE 453
Query: 432 GKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
+W +R+ M +G++K PG S +E+ + ++EF+ GDRSH +SE Y+ML ++ L
Sbjct: 454 RRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLL 513
Query: 492 KLCGYVPETV 501
K+ GYVP TV
Sbjct: 514 KIEGYVPRTV 523
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 107/212 (50%), Gaps = 2/212 (0%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTIISVLNACA 226
A ++F+++ + +W ++ GF + A+E F +M S + PD T + A A
Sbjct: 88 AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ + +G IH V++ F V N+L+ +YS G E A QVF+ M R V+WNS
Sbjct: 148 KLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNS 207
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I GFA+NG EAL + M EG +PDG + L+AC G + G R M K+
Sbjct: 208 VINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVG 267
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
V + ++DLYS+ G DA V + M
Sbjct: 268 LVQNQ-HASNALLDLYSKCGNFRDAQKVFDEM 298
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 153/388 (39%), Gaps = 87/388 (22%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ +G EA + M G P+ T ++LLS C + + L LG +H
Sbjct: 203 VAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGA--LALGERVH 260
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K+GL +N ALLD+Y+K G A VFD M +S +W ++I
Sbjct: 261 MYMVKVGLVQNQ-HASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIV-------- 311
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
G G EAL+ F E++ G++P +T + VL AC
Sbjct: 312 -----------------------GLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYAC 348
Query: 226 ANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
++ G L G + R + ++ ++DL R G
Sbjct: 349 SHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGK------------------- 389
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK- 343
VG+A +Y +M P+ V + L AC+ G +E G ++ +
Sbjct: 390 ------------VGDAYDYIRNMP---VPPNAVIWRTLLGACTIHGHLELG----EVARA 430
Query: 344 KIYRVSPRIEHYGCIV---DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK-GD 399
+I R+ R H G V +LY+ R D NV + M MK + G L + + +
Sbjct: 431 EIQRLEQR--HSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYE 488
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANM 427
I+ +R P + Y +LA +
Sbjct: 489 FIMGDR-------SHPQSEETYAMLAKI 509
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 100/231 (43%), Gaps = 39/231 (16%)
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ-KEGFKP 314
+ L S + FA Q+F ++ + +WN++I GFA + A+E F+ M P
Sbjct: 75 IFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILP 134
Query: 315 DGVSFTGALTACS-----------HAGLIEDG---LRY-----------FDIMKKIYRVS 349
D +F A + H+ ++ +G LR+ F + Y+V
Sbjct: 135 DTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVF 194
Query: 350 PRIEH-----YGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDII 401
+ + + +++ ++ G +AL + M ++P+ + SLL+AC G +
Sbjct: 195 EIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALA 254
Query: 402 LAERLMKYLVDLDPGVDSNYV---LLANMYAAVGKWDGAGKIRRTMKGRGI 449
L ER+ Y+V + G+ N L ++Y+ G + A K+ M+ R +
Sbjct: 255 LGERVHMYMVKV--GLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSV 303
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/447 (37%), Positives = 256/447 (57%), Gaps = 5/447 (1%)
Query: 57 RSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPS--QCLFLGAMIHGLVCKLGLD 114
RS R A + + G P T +LL A P+ L +H KLGLD
Sbjct: 49 RSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLALTVHTHAVKLGLD 108
Query: 115 RNNVMVGTALLDMYAKF-GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
R V+V AL+ ++A F G + ++ + T+N +I Y R G + A +FD
Sbjct: 109 RF-VLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLADARALFD 167
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI 233
EMP R+A+SW+A++NG+V+ G EAL F MQ V PD ++ VL ACA G L
Sbjct: 168 EMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQ 227
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV 293
G W+H Y+ K N+ L+D+YS+CG ++ A VF+RM + +++W ++I G A+
Sbjct: 228 GKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAM 287
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE 353
+G EA+ F M+ G +PD ++F G L AC+HAGL++ G FD M + Y + P+IE
Sbjct: 288 HGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIE 347
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
HYGC+VDL +R G L +A +++ MPM+P+ ++ G+L+A CR ++ AE + K+ + L
Sbjct: 348 HYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFAEYVAKHWILL 407
Query: 414 DPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRS 473
+P YVLL+N+YAA G+ A +IR M+ +G+ K PG S++E+ IH+F+ GD S
Sbjct: 408 EPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEVNGVIHQFIVGDLS 467
Query: 474 HIESEHIYSMLELLSFDLKL-CGYVPE 499
H + I S + ++L GY+P+
Sbjct: 468 HPRIKDILSKWYEIDTRIRLEEGYIPD 494
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 36/248 (14%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ ++ + ++G EA F RM P+ + +L+ CA + L G +
Sbjct: 174 AVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGA--LEQGKWV 231
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + G+ + N+ GTAL+DMY+K G + LA VF+ M+ K+ W MI G G
Sbjct: 232 HGYLKAHGI-KINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHG- 289
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
RG EA+ F +M+ SG+ PD + I VL A
Sbjct: 290 ----------------------------RG--SEAVMLFAQMESSGIRPDDIAFIGVLCA 319
Query: 225 CANVGTLGIGLWI-HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLV 282
C + G + G + V K K ++ ++DL +R G + A+++ Q+M + +
Sbjct: 320 CTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDAL 379
Query: 283 SWNSIIVG 290
W +++ G
Sbjct: 380 IWGALMAG 387
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 164/456 (35%), Positives = 268/456 (58%), Gaps = 38/456 (8%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V WT IS + R+G EA F +M + PN TF+++L C L +G
Sbjct: 168 VRDVVSWTGLISGYVRTGLFDEAINLFLKMDV---VPNVATFVSVLVACGRMGY--LSMG 222
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+HGLV K ++VG AL+DM Y++
Sbjct: 223 KGVHGLVYKRAFGIG-LVVGNALVDM-------------------------------YVK 250
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+ A ++FDE+P RD +SWT++++G V+ +++LE F +MQISGVEPD + + SV
Sbjct: 251 CECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSV 310
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+ACA++G L G W+ Y+ +Q + ++ + L+D+Y++CGCIE A +F + R +
Sbjct: 311 LSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNI 370
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF-D 340
+WN+++ G A++G EAL++F M G +P+ V+F LTAC H+GL+ +G YF
Sbjct: 371 FTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQ 430
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
++ + + SPR+EHYGC++DL RAG L++A + NMP+ P+ ++ G+LL+AC+ G++
Sbjct: 431 MISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNV 490
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L++ ++ +L++L YVLL+N+YA +WD ++RR MK +GI+K PG S IE+
Sbjct: 491 ELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSVIEV 550
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGY 496
HEF+ GD +H +E I+ +L +L+ + L G+
Sbjct: 551 DGEAHEFLVGDTNHSRNEDIHILLNILANQVYLEGH 586
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 198/440 (45%), Gaps = 81/440 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T+ + + I+ + S A L + R+ +G P+ TF +L C F + G +
Sbjct: 70 TLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLG--VQEGEQV 127
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG+ K+G L D+Y + N+++ Y G
Sbjct: 128 HGVAVKMGF----------LCDLYVQ----------------------NSLLHFYSVCGK 155
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A R+FDEM VRD +SWT L++G+V+ G F+EA+ F +M V P+ T +SVL A
Sbjct: 156 WGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKMD---VVPNVATFVSVLVA 212
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C +G L +G +H V K+ F + V N L+D+Y +C C+ AR++F + R +VSW
Sbjct: 213 CGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSW 272
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
SII G ++LE F MQ G +PD + T L+AC+ G ++ G R+ +
Sbjct: 273 TSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYG-RWVQEYIE 331
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP------------------------- 379
+ I +VD+Y++ G +E AL++ +P
Sbjct: 332 RQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALK 391
Query: 380 ---------MKPNEVVLGSLLAACRTKGDIILAE------RLMKYLVDLDPGVDSNYVLL 424
++PNEV ++L AC G ++AE +++ + P ++ +Y +
Sbjct: 392 HFELMIGAGIRPNEVTFLAILTACCHSG--LVAEGRSYFYQMISQPFNFSPRLE-HYGCM 448
Query: 425 ANMYAAVGKWDGAGKIRRTM 444
++ G D A K R M
Sbjct: 449 IDLLCRAGLLDEAYKFIRNM 468
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 164/457 (35%), Positives = 268/457 (58%), Gaps = 36/457 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAM 103
+ W++ I+ + G+ AL+ RM L G P+ IT +LL C+D + L +G +
Sbjct: 197 VISWSAMIAAYGYHGQ-GRKALDLFRMMLSSGMLPDKITLASLLYACSDLKN--LQMGRL 253
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH +V K GLD ++ V AL+DMY K
Sbjct: 254 IHHIVYKFGLDLDH-FVCAALVDMYGKCR------------------------------- 281
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+IE A +FD+MP RD ++WT ++ G+ + G E+L F +M+ GV PD V +++V+
Sbjct: 282 EIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVF 341
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA +G + I Y+ ++ F+ +V + +ID++++CGC+E AR++F RM ++ ++S
Sbjct: 342 ACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVIS 401
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W+++I + +G +AL+ F M + G P+ ++ L ACSHAGL+E+GLR+F +M
Sbjct: 402 WSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMW 461
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ Y V ++HY C+VDL RAGRL++AL ++E+M ++ +E + G+ L ACRT D++LA
Sbjct: 462 EDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLA 521
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E+ L++L P +Y+LL+N+YA G+W+ K R M R ++K PG + IE+ +
Sbjct: 522 EKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNK 581
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
H+F GD +H S+ IY ML+ L L+L GYVP+T
Sbjct: 582 SHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDT 618
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 161/314 (51%), Gaps = 39/314 (12%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F + G P++ T ++ C D + L +G +IH +V K GLD ++
Sbjct: 18 FRELIRCGARPDNYTLPFVIRACRDLKN--LQMGRLIHHIVYKFGLDLDH---------- 65
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
F A++D Y++ +IE A +FD+M RD ++WT ++
Sbjct: 66 ----------------------FVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMI 103
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
G+ + G E+L F +M+ GV PD V +++V+ ACA +G + I Y+ ++ F+
Sbjct: 104 GGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQ 163
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
+V + +ID+Y++CGC+E AR++F RM ++ ++SW+++I + +G +AL+ F M
Sbjct: 164 LDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMM 223
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC--IVDLYSRA 365
G PD ++ L ACS ++ G I +Y+ ++H+ C +VD+Y +
Sbjct: 224 LSSGMLPDKITLASLLYACSDLKNLQMGRLIHHI---VYKFGLDLDHFVCAALVDMYGKC 280
Query: 366 GRLEDALNVVENMP 379
+EDA + + MP
Sbjct: 281 REIEDARFLFDKMP 294
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 206/459 (44%), Gaps = 86/459 (18%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT I + G+ E+ + F +M G P+ + +T++ CA LGAM
Sbjct: 97 VTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAK-------LGAMHK 149
Query: 106 GLVCKLGLDRN----NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ + R +V++GTA++DMYA +
Sbjct: 150 ARIIDDYIQRKKFQLDVILGTAMIDMYA-------------------------------K 178
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G +ESA +FD M ++ ISW+A++ + G +AL+ FR M SG+ PD +T+ S+
Sbjct: 179 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASL 238
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L AC+++ L +G IH V K + VC L+D+Y +C IE AR +F +M +R L
Sbjct: 239 LYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDL 298
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD- 340
V+W +I G+A G E+L F+ M++EG PD V+ + AC+ G + D
Sbjct: 299 VTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 358
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK------------------- 381
I +K +++ + ++D++++ G +E A + + M K
Sbjct: 359 IQRKKFQLDVILG--TAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGR 416
Query: 382 ---------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN---YVL 423
PN++ L SLL AC G + R + + D V ++ Y
Sbjct: 417 KALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWE-DYSVRADVKHYTC 475
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
+ ++ G+ D A K+ +M ++K GL +G+
Sbjct: 476 VVDLLGRAGRLDEALKLIESMT---VEKDEGLWGAFLGA 511
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 131/284 (46%), Gaps = 41/284 (14%)
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
++ GF K G + FRE+ G PD T+ V+ AC ++ L +G IH V K
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
+ VC L+D+Y +C IE AR +F +M +R LV+W +I G+A G E+L F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD--IMKKIYRVSPRIEHYGCIVDLYS 363
M++EG PD V+ + AC+ G + R D I +K +++ + ++D+Y+
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKA-RIIDDYIQRKKFQLDVILG--TAMIDMYA 177
Query: 364 RAGRLEDALNVVENMP----------------------------------MKPNEVVLGS 389
+ G +E A + + M M P+++ L S
Sbjct: 178 KCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLAS 237
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGK 433
LL AC ++ + RL+ ++V G+D ++ + A + GK
Sbjct: 238 LLYACSDLKNLQMG-RLIHHIV-YKFGLDLDHFVCAALVDMYGK 279
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 166/460 (36%), Positives = 258/460 (56%), Gaps = 34/460 (7%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T V WT+ I+ RS R+ E F RM PN IT ++L+ C + L L
Sbjct: 259 TQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECG--FTGALQL 316
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +H + + G + + + TAL+DMY K
Sbjct: 317 GKQLHAYILRNGFSVS-LALATALVDMYGKCS---------------------------- 347
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
DI +A +FD RD + WTA+L+ + + ++A F +M+ SGV P VTI+S
Sbjct: 348 ---DIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVS 404
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+L+ CA G L +G W+H Y+ K+ + + + L+D+Y++CG I A ++F R
Sbjct: 405 LLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRD 464
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+ WN+II GFA++G+ EAL+ F M+++G KP+ ++F G L ACSHAGL+ +G + F+
Sbjct: 465 ICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFE 524
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + + P+IEHYGC+VDL RAG L++A ++++MP+KPN +V G+L+AACR +
Sbjct: 525 KMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNP 584
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E L++++P VL++N+YAA +W A +R+TMK G++K+PG S IE+
Sbjct: 585 QLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEV 644
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+HEF+ GD+SH + I ML + L GYVP+T
Sbjct: 645 NGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDT 684
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 179/380 (47%), Gaps = 74/380 (19%)
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
LG IHG V K GLDR+ V VG AL+ MY + ++ A +VF
Sbjct: 112 LGKEIHGFVLKKGLDRD-VFVGNALMLMYGECACVEYARLVF------------------ 152
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
D+M RD +SW+ ++ + F+ ALE REM V P V ++
Sbjct: 153 -------------DKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMV 199
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT--LIDLYSRCGCIEFARQVFQRMH 277
S++N A+ + +G +H YV++ +++ V T L+D+Y++CG + ARQ+F +
Sbjct: 200 SMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLT 259
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
++T+VSW ++I G + + E + F MQ+E P+ ++ + C G ++ G +
Sbjct: 260 QKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQ 319
Query: 338 -YFDIMKKIYRVS-----PRIEHYGCIVDL------------------------YSRAGR 367
+ I++ + VS ++ YG D+ Y++A
Sbjct: 320 LHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANC 379
Query: 368 LEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYL----VDLDPGVDSN 420
++ A N+ + M ++P +V + SLL+ C G + L + + Y+ V++D +++
Sbjct: 380 IDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNT- 438
Query: 421 YVLLANMYAAVGKWDGAGKI 440
L +MYA G + AG++
Sbjct: 439 --ALVDMYAKCGDINAAGRL 456
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 197/441 (44%), Gaps = 81/441 (18%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTR-MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I R+ + ALE R M P+ + +++++ AD + + +G +
Sbjct: 161 VSWSTMIRSLSRNKEF-DMALELIREMNFMQVRPSEVAMVSMVNLFADTAN--MRMGKAM 217
Query: 105 HGLVCKLGLDRNNVMVG----TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
H V + + NN +G TALLDMYAK G + LA +F+ + K+ +W AMI G +
Sbjct: 218 HAYVIR---NSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 274
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R +E ++F +R MQ + P+ +T++S
Sbjct: 275 RSNRLEEGTKLF----IR---------------------------MQEENIFPNEITMLS 303
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
++ C G L +G +H Y+L+ F ++ + L+D+Y +C I AR +F R
Sbjct: 304 LIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRD 363
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
++ W +++ +A + +A F+ M+ G +P V+ L+ C+ AG ++ G
Sbjct: 364 VMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHS 423
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSR------AGRL-------------------------E 369
+ K RV +VD+Y++ AGRL E
Sbjct: 424 YIDK-ERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGE 482
Query: 370 DALNV---VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD---LDPGVDSNYVL 423
+AL++ +E +KPN++ LL AC G + ++L + +V L P ++ +Y
Sbjct: 483 EALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIE-HYGC 541
Query: 424 LANMYAAVGKWDGAGKIRRTM 444
+ ++ G D A ++ ++M
Sbjct: 542 MVDLLGRAGLLDEAHEMIKSM 562
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 98/235 (41%), Gaps = 51/235 (21%)
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
SVL AC V +G IH +VLK+ +V V N L+ +Y C C+E+AR VF +M +R
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD------------------------ 315
+VSW+++I + N ALE M +P
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 316 ------------GVSFTGAL----TACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
GV T AL C H GL + F+ + + VS GCI
Sbjct: 219 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLAR---QLFNGLTQKTVVSWTAMIAGCI- 274
Query: 360 DLYSRAGRLEDALNVVENMPMK---PNEVVLGSLLAACRTKGDIILAERLMKYLV 411
R+ RLE+ + M + PNE+ + SL+ C G + L ++L Y++
Sbjct: 275 ----RSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYIL 325
>gi|242065790|ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
gi|241934015|gb|EES07160.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
Length = 530
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 165/428 (38%), Positives = 251/428 (58%), Gaps = 6/428 (1%)
Query: 68 FTRMTLHG-TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD 126
F RM HG PN + +L + + IH CK G +++ + T++LD
Sbjct: 107 FLRMLRHGRPAPNQFVYPLVLRAASGVGVGIV---KSIHSHACKSGFCGHDI-IRTSVLD 162
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTAL 186
Y++ G M A +FD + ++ +W A++ GY R G + A+ +F+ MP RD +W A+
Sbjct: 163 GYSRHGMMADARKLFDGLTERNVVSWTALVSGYARAGKVGDAIVLFERMPERDVAAWNAI 222
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
+ G + G F EA+ F M +G P+ T+ VL+AC ++G L IG IH Y +
Sbjct: 223 IAGCSQNGLFVEAVGIFGRMVGAGFRPNATTVSCVLSACGHLGMLKIGKLIHCYAWRTCV 282
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
V N LID+Y +CG +E AR +F + R+L +WNS+I A++G A+ FN
Sbjct: 283 GFGSSVLNGLIDMYGKCGNLEGARWIFDEVSDRSLTTWNSLINCLALHGHSKCAISVFNE 342
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M+ EG +PD V+F G L AC+H G +++G+RYF++M+ + + P IEHYGCI+DL RAG
Sbjct: 343 MRGEGVEPDVVTFVGLLNACTHGGFVDEGIRYFELMQHEHGIEPEIEHYGCIIDLLGRAG 402
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN 426
R +DALNV+ +M ++ +EV+ GSLL ACR + AE ++ L++LDP + V+LAN
Sbjct: 403 RFQDALNVISDMRIEADEVMWGSLLNACRVHRQVEFAELAIRKLLELDPNNANYVVMLAN 462
Query: 427 MYAAVGKWDGAGKIRRTMKGRGIQKK-PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
+Y+ G W+ K+R+ +K I KK PG S IE+ H F +GD +H ESE+IY LE
Sbjct: 463 VYSEGGLWEEVRKVRKFVKEENIGKKLPGCSWIEVDRKTHRFYSGDDAHPESENIYDTLE 522
Query: 486 LLSFDLKL 493
L+ + L
Sbjct: 523 DLAASMDL 530
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 164/435 (37%), Positives = 250/435 (57%), Gaps = 26/435 (5%)
Query: 68 FTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD 126
++R+ H T PN TF +L C P L G +H V K + V ALL+
Sbjct: 95 YSRVLTHTTLKPNGFTFPSLFKACGSQPW--LRHGRALHTHVLKFLEPTCDPFVQAALLN 152
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTAL 186
YAK G++ +F+ + +WN+++ Y+ + + +S +
Sbjct: 153 YYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSG-----------AICEDVSLSL- 200
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
E L F EMQ S ++ + VT++++++ACA +G L G W H YVLK +
Sbjct: 201 -----------EVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNL 249
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
K N V LID+YS+CGC++ A Q+F ++ R + +N++I GFA++G+ +AL+ F
Sbjct: 250 KLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKK 309
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M EG PD V+ + +CSH GL+E+G F+ MK++Y V P++EHYGC+VDL RAG
Sbjct: 310 MTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAG 369
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN 426
RL +A V NMPMKPN V+ SLL A R G++ + E ++K+L+ L+P NYVLL+N
Sbjct: 370 RLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSN 429
Query: 427 MYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLEL 486
MYA++ +WD ++R+ MK GI K PG S +E+G +HEF+ GD++H S+ IY LE
Sbjct: 430 MYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEE 489
Query: 487 LSFDLKLCGYVPETV 501
+S L G+ P T+
Sbjct: 490 MSRRLHEYGHKPRTL 504
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 118/259 (45%), Gaps = 46/259 (17%)
Query: 48 WTSSISRHCR-SGRIAE---AALE----FTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
W S +S + SG I E +LE F M N +T + L+S CA+ + L
Sbjct: 178 WNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGA--LS 235
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
GA H V K L N+ VGTAL+DMY+K G +DLA +FD + + + +NAMI
Sbjct: 236 QGAWAHVYVLKHNLKLNH-FVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMI--- 291
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
GF GY +AL+ F++M + G+ PD VT++
Sbjct: 292 ----------------------------GGFAIHGYGHQALDLFKKMTLEGLAPDDVTLV 323
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN--TLIDLYSRCGCI-EFARQVFQRM 276
+ +C++VG + G + +K+ + K+ + L+DL R G + E +V
Sbjct: 324 VTMCSCSHVGLVEEGCDVFE-SMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMP 382
Query: 277 HKRTLVSWNSIIVGFAVNG 295
K V W S++ V+G
Sbjct: 383 MKPNAVIWRSLLGAARVHG 401
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 171/496 (34%), Positives = 273/496 (55%), Gaps = 35/496 (7%)
Query: 7 ATILPQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTV-QWTSSISRHCRSGRIAEAA 65
A + FL + + +T + ++ T +P + W + I + S A
Sbjct: 33 ANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAI 92
Query: 66 LEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALL 125
+ M L G +PN TF +L C C G +H + K+GLD +V L+
Sbjct: 93 ALYRDMFLCGISPNSYTFGFVLKACCKLLRLCE--GQELHSQIVKVGLDFETPLV-NGLI 149
Query: 126 DMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTA 185
+YA G MD A V MFDEMP D+ SW+
Sbjct: 150 KLYAACGCMDYACV-------------------------------MFDEMPEPDSASWST 178
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
+++G+ + G EAL+ FREMQ V D T+ SV+ C ++G L +G W+H Y+ K+
Sbjct: 179 MVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEG 238
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
K +V + L+ +YS+CG ++ A +VFQ M +R + +W+++I G+A++G +AL+ F+
Sbjct: 239 VKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFD 298
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
+M++ P+ V+FT L+ACSH+GL+E G + F+ M Y+++P+I+HYGC+VDL+ RA
Sbjct: 299 AMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRA 358
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLA 425
G + A ++ MP++PN V+ +LL AC+T G L E + + ++ LDP NYVL++
Sbjct: 359 GMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVS 418
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
N+YA++G+W ++R MK + +K+ G SSIEI +H+F+ GD SH E E IY ML
Sbjct: 419 NVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLH 478
Query: 486 LLSFDLKLCGYVPETV 501
++ LK G+V TV
Sbjct: 479 QMARKLKQVGHVNSTV 494
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 262/459 (57%), Gaps = 25/459 (5%)
Query: 30 QISIQTNNSKSTVNPTVQWTSSISR-HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLS 88
Q+++ N +P V +++ R H R+ A F M G ++ T+ LL
Sbjct: 64 QMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLK 123
Query: 89 GCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS 148
C+ + + MIH V K+G + + V +L+D Y K G + A +FD M +
Sbjct: 124 ACSG--KVWVRVVEMIHAQVEKMGFCLD-IFVPNSLIDSYFKLGELGEARRLFDEMPERD 180
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
+ +WN ++DGY++ G++ +A +F++MP R+ +SW+ + EA
Sbjct: 181 TVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTM-----------EA--------- 220
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
G++ D T+IS+L+ACA G LG+G +H + + FK + V N LID+Y++CG +E
Sbjct: 221 -GLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLEN 279
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
A +F M ++ +VSWN+II G A++G +AL+ F+ M+ EGF PD V+F G L AC+H
Sbjct: 280 ALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTH 339
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
AG +++GL YF M++ Y V P +EHYGC+VDL R GRL++A +V +MP++PN ++ G
Sbjct: 340 AGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWG 399
Query: 389 SLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
+LL ACR LAE + LV + N +L+N+YAA G WD IR MK
Sbjct: 400 TLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTS 459
Query: 449 IQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
IQK G SSIE+ +HEF DRSH +S+ IY ++ L
Sbjct: 460 IQKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTIDGL 498
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 121/253 (47%), Gaps = 13/253 (5%)
Query: 140 VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
V A + SF +I + + AV +F+++ D + + L+ V+ A
Sbjct: 40 VLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLA 99
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL 259
F EMQ SGV D T +L AC+ + + IH V K F ++ V N+LID
Sbjct: 100 FSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDS 159
Query: 260 YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM----------QK 309
Y + G + AR++F M +R VSWN+I+ G+ G + A E F M +
Sbjct: 160 YFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTME 219
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
G K D + L+AC+ +GL+ G R + I + ++ S + + ++D+Y++ G L
Sbjct: 220 AGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSN--ALIDMYAKCGSL 277
Query: 369 EDALNVVENMPMK 381
E+AL++ M K
Sbjct: 278 ENALSIFHGMVRK 290
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 90/236 (38%), Gaps = 56/236 (23%)
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
IS L+ C+++ + IH VLK + V LI +S C + A VF ++
Sbjct: 21 ISDLHRCSSLNQVK---QIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQD 77
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS----------- 327
++ +N++I N A F MQ G D ++ L ACS
Sbjct: 78 PDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMI 137
Query: 328 HA------------------------GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
HA G + + R FD M + VS + I+D Y
Sbjct: 138 HAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVS-----WNTILDGYV 192
Query: 364 RAGRLEDALNVVENMP-------------MKPNEVVLGSLLAACRTKGDIILAERL 406
+AG + A + E MP +K ++ + S+L+AC G + L +R+
Sbjct: 193 KAGEMNAAFELFEKMPARNVVSWSTMEAGLKFDDGTVISILSACAVSGLLGLGKRV 248
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 168/452 (37%), Positives = 258/452 (57%), Gaps = 8/452 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ + ++G + EA F RM G P+ +T +++S CA + G +H
Sbjct: 214 VSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAG--REGRQVH 271
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K R ++++ AL+DMYAK GR A VFD M ++S + +MI GY + ++
Sbjct: 272 TRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANV 331
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +F +M ++ ++W L+ + EEAL F ++ V P + T +VLNAC
Sbjct: 332 GDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNAC 391
Query: 226 ANVGTLGIGLWIHRYVLKQDFK------DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
AN+ L +G H +VLK+ F+ +V V N+L+D+Y + G I +VF+RM R
Sbjct: 392 ANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAAR 451
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
VSWN++IVG+A NG +AL F M +PD V+ G L+AC H+GL+++G RYF
Sbjct: 452 DNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYF 511
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M + + + P +HY C++DL RAG L++ ++ENMPM+P+ V+ SLL ACR +
Sbjct: 512 QSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKN 571
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
I + E L +LDP YVLL+NMYA +GKW ++RR+MK RG+ K+PG S IE
Sbjct: 572 IDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIE 631
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
IG ++ F+A D H I+ L ++ +
Sbjct: 632 IGRKVNVFLARDNIHPCRNEIHDTLRIIQMQM 663
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 130/258 (50%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
LL YA+ G + A VFD M +++F++NA++ R G + A+ +F +P D S+
Sbjct: 56 LLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQCSY 115
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
A++ + G +AL M + + S L+ACA+ G +H V K
Sbjct: 116 NAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTK 175
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
+V + L+D+Y++C E A++VF M +R +VSWNS+I + NG V EAL
Sbjct: 176 SSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALAL 235
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F M K+GF PD V+ ++AC+ +G + M K R + +VD+Y+
Sbjct: 236 FVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYA 295
Query: 364 RAGRLEDALNVVENMPMK 381
+ GR +A V + M ++
Sbjct: 296 KCGRTWEAKCVFDRMAIR 313
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 185/400 (46%), Gaps = 81/400 (20%)
Query: 50 SSISRHCRSGRIAEAALEFTRMTLHGTN--PNHITFITLLSGCADFPSQCLFLGAMIHGL 107
+++++H R G AL F +H + N +F + LS CA + G +H L
Sbjct: 120 AALAQHGRGGD----ALRFL-AAMHADDFVLNAYSFASALSACAS--EKASRTGEQVHAL 172
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V K ++V +GTAL+DMYAK R + A VFDAM ++ +WN++I Y + G ++
Sbjct: 173 VTKSS-HGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDE 231
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A+ +F M + +GFV PD VT+ SV++ACA
Sbjct: 232 ALALFVRM----------MKDGFV---------------------PDEVTLASVMSACAG 260
Query: 228 VGTLGIGLWIHRYVLKQD-FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ G +H ++K D F++++ + N L+D+Y++CG A+ VF RM R++VS S
Sbjct: 261 LAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETS 320
Query: 287 IIVGFAVNGFVG-------------------------------EALEYFNSMQKEGFKPD 315
+I G+A + VG EAL F +++E P
Sbjct: 321 MITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPT 380
Query: 316 GVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVS--PRIEHY--GCIVDLYSRAGRLED 370
++ L AC++ ++ G + + ++K+ +R P + + +VD+Y + G + D
Sbjct: 381 HYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISD 440
Query: 371 ALNVVENMPMKPN---EVVLGSLLAACRTKGDIILAERLM 407
V E M + N ++ R K ++L ER++
Sbjct: 441 GAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERML 480
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 36/236 (15%)
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTL----------------------- 281
F + NTL+ Y+R G + AR+VF M H+ T
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 282 -------VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
S+N+++ A +G G+AL + +M + F + SF AL+AC+
Sbjct: 106 AIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRT 165
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
G + ++ K S + +VD+Y++ R E+A V + MP + N V SL+
Sbjct: 166 GEQVHALVTKSSHGSD-VYIGTALVDMYAKCERPEEAQKVFDAMPER-NIVSWNSLITCY 223
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
G + E L ++ + G + V LA++ +A AG+ R + R ++
Sbjct: 224 EQNGPV--DEALALFVRMMKDGFVPDEVTLASVMSACAGL-AAGREGRQVHTRMVK 276
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 263/448 (58%), Gaps = 5/448 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I ++G +EA F M G + TF++LL C+ + L +G ++
Sbjct: 174 VVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSLLLVCSKEGN--LEVGRLV 231
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + G R ++++G AL+DMY K G + +A FD M +K+ +W +M+ + G
Sbjct: 232 HCHMLASG-SRVDLILGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGS 290
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+++A F++MP R+ ISW A+++ +V+ G F E L + M+ G+ PD VT+ VL+
Sbjct: 291 VDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSV 350
Query: 225 CANVGTLGIGLWIHRYVLKQDFKD-NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
G L G IH Y+ + F D V V N+LID+Y+RCG ++ + +F M + +S
Sbjct: 351 HGQNGDLASGRMIHCYI-QDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTIS 409
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN II A++G EA+ +F +M + F PD ++F G L+ACSH GL+EDG YF M+
Sbjct: 410 WNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMR 469
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
IY V P +EHY C+VDL R G L A++++++MPMKP+ VV G+L+ ACR G + +
Sbjct: 470 HIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIG 529
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
+ +K L++L+ +VL++N+ +W+ ++R+ M+ RG +K G+SSIEI +
Sbjct: 530 KLAIKQLLELEGINGGLFVLISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVSSIEINNS 589
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDL 491
IHEF D H S IY+ ++ L++ L
Sbjct: 590 IHEFGVEDIRHESSSQIYAAVDQLAYHL 617
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 171/389 (43%), Gaps = 52/389 (13%)
Query: 58 SGRIAEAAL-EFTRMTLHGTNPNHITFITLL-----SGCADFPSQCLFLGAMIHGLVCKL 111
SGR + AL RM +P+ + +L+ SGC P + L L H V +
Sbjct: 49 SGRAGDVALCHARRMFDRVPDPDRFAYNSLIRAYSNSGC---PQEALCL----HRDVLRR 101
Query: 112 GLDRNNVMVGTALLDM-YAKFGRMDLAT--VVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
G+ N + L A+ LAT V V+ F NA++ G + +
Sbjct: 102 GILPNEFTLPFVLKACSRARAAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDS 161
Query: 169 VRMFDEM-PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
R+F EM P R+ +SW ++ G + G EA FREM+ GV D T +S+L C+
Sbjct: 162 RRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSLLLVCSK 221
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC------------------------ 263
G L +G +H ++L + ++ + N L+D+Y +C
Sbjct: 222 EGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSM 281
Query: 264 -------GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
G ++ AR F++M +R ++SWN++I + G E L +N M+ G PD
Sbjct: 282 LCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDE 341
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
V+ G L+ G + G ++ + P + ++D+Y+R G+++ ++++
Sbjct: 342 VTLAGVLSVHGQNGDLASGRMIHCYIQDSFS-DPGVTVLNSLIDMYARCGQVDTSISLFT 400
Query: 377 NMPMKPN---EVVLGSLLAACRTKGDIIL 402
MP K V++G+L R + ++
Sbjct: 401 EMPNKNTISWNVIIGALAMHGRAQEAVMF 429
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 180/497 (36%), Positives = 288/497 (57%), Gaps = 18/497 (3%)
Query: 2 NSSATATILPQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQ-WTSSISRHCRSGR 60
N+ A + +L F ++ +++LT ++ Q N PTV + + I + +
Sbjct: 36 NTFALSRVLA--FCSSHKHHHESLTYACRVFEQIQN------PTVCIYNTLIKAFLVNNK 87
Query: 61 IAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMV 120
A F +M P++ T +L C F C F G MIHG KLGL ++ V
Sbjct: 88 FKSALQVFVKMLQSELKPDNYTIPYVLKACGTF-HDCSF-GKMIHGYSSKLGL-VFDIYV 144
Query: 121 GTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDA 180
G +L+ MY FG + A VFD + + +W+ MI GY + GD++SA FDE P +D
Sbjct: 145 GNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFDEAPEKDK 204
Query: 181 ISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
W A+++G+V+ F+E+L FR MQ++ + PD +S+L+ACA++G L IG+WIH++
Sbjct: 205 GIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGVWIHQH 264
Query: 241 VLKQDFKD-NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
+ + +V++ +L+D+Y++CG +E A+++F M+ R +V WN++I G A++G
Sbjct: 265 LNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNAMISGMAMHGDGKG 324
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
AL+ F M+K G KPD ++F TACS++G+ +GL D M +Y + P+ EHYGC+V
Sbjct: 325 ALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYNIVPKSEHYGCLV 384
Query: 360 DLYSRAGRLEDALNVVENMPMKPN--EVVLG--SLLAACRTKGDIILAERLMKYLVDLDP 415
DL SRAG E+A+ ++ + N E L + L+AC G+ LAE + ++ LD
Sbjct: 385 DLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCNHGETQLAELAAEKVLQLDN 444
Query: 416 GVDSN-YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSH 474
+ S YVLL+N+YAA GK A ++R MK +G K PG SS+EI I EF+AG+++H
Sbjct: 445 HIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNKAPGCSSVEIDGVISEFIAGEKTH 504
Query: 475 IESEHIYSMLELLSFDL 491
+ E I+S+L+ + L
Sbjct: 505 PQMEEIHSVLKKMHMQL 521
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 163/432 (37%), Positives = 259/432 (59%), Gaps = 4/432 (0%)
Query: 63 EAALEFTR-MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG 121
E ALE R M G P+ + T++S C L + +H + K G++ + V
Sbjct: 174 EKALELFRTMREVGLTPDMVAISTVVSACGLLGD--LGVAKAMHCFIEKSGIEVD-AFVS 230
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
+ L+ Y + G +D A F +K+ WN MI + ++E ++F MP RD +
Sbjct: 231 STLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVV 290
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
SW +++ GF + G ++EAL F EM+ SGV P+ +T++S L+ACA+ G L G WIH YV
Sbjct: 291 SWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYV 350
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
K D + + ++LID+YS+CG I+ A Q+F+ +R L +W SI+ G A++G +AL
Sbjct: 351 DKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKAL 410
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
YF+ M++ +PD V+ G L+AC+HAGL++ G YF M+K++ + P++EHYGC+VDL
Sbjct: 411 HYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDL 470
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
R G L++A +++ MPM+ NE++ G+ L+ACR ++ L E + L+ LDP
Sbjct: 471 LGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLDPRDPWAR 530
Query: 422 VLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIY 481
V+L+NMYA KWD + +R+ +K +G++K PG SSIE+ +H F+ GD SH I
Sbjct: 531 VMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEIN 590
Query: 482 SMLELLSFDLKL 493
SM+E + ++L
Sbjct: 591 SMVEKIEKLMRL 602
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 152/363 (41%), Gaps = 68/363 (18%)
Query: 48 WTSSISRHCRSGRIAE--AALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
W + I + +G I L + + G PN TF+ LL A Q + G +H
Sbjct: 57 WNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLK--ALVSGQEVKEGEEVH 114
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + G + + G ALL Y G + VFD MR W
Sbjct: 115 ASVVRTGFACSEFVSG-ALLGFYVACGLVGKGRQVFDEMRQPGLVLW------------- 160
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
T ++ +V + E+ALE FR M+ G+ PD V I +V++AC
Sbjct: 161 ------------------TLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSAC 202
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA---------------- 269
+G LG+ +H ++ K + + V +TLI Y CG +++A
Sbjct: 203 GLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWN 262
Query: 270 ---------------RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
+Q+FQ M R +VSWNS+I GFA G EAL +F+ M+ G P
Sbjct: 263 TMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSP 322
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
+ ++ L+AC+ G ++ G + K ++ ++D+YS+ G ++ A+ +
Sbjct: 323 NALTLLSTLSACASHGALDTGAWIHAYVDK-NDMNRDGSLDSSLIDMYSKCGDIDKAVQI 381
Query: 375 VEN 377
E
Sbjct: 382 FEE 384
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 40/261 (15%)
Query: 17 HQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT 76
HQ + NL Q+ Q+ + V+ W S I R G+ EA F M G
Sbjct: 266 HQSVEHNNLELGKQL-FQSMPDRDVVS----WNSMIGGFARIGQYQEALTWFHEMEFSGV 320
Query: 77 NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
+PN +T ++ LS CA + L GA IH V K ++R+ + ++L+DMY+K G +D
Sbjct: 321 SPNALTLLSTLSACASHGA--LDTGAWIHAYVDKNDMNRDGSL-DSSLIDMYSKCGDIDK 377
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A +F+ + FTW +++ G G RG
Sbjct: 378 AVQIFEESTRRDLFTWTSIVCGLAMHG-----------------------------RG-- 406
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNT 255
E+AL F +M+ + V+PD VT++ VL+ACA+ G L G W + + K V+
Sbjct: 407 EKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGC 466
Query: 256 LIDLYSRCGCIEFARQVFQRM 276
++DL R GC++ A + M
Sbjct: 467 MVDLLGRMGCLKEAYDLIMGM 487
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 105/243 (43%), Gaps = 22/243 (9%)
Query: 183 WTALLNGFVKRGYFEEALECFREMQ--ISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
W ++ V+ G MQ +G+ P+ T + +L A + + G +H
Sbjct: 57 WNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHAS 116
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
V++ F + V L+ Y CG + RQVF M + LV W II + F +A
Sbjct: 117 VVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKA 176
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
LE F +M++ G PD V+ + ++AC GL+ D + K ++ IE G VD
Sbjct: 177 LELFRTMREVGLTPDMVAISTVVSAC---GLLGD----LGVAKAMHCF---IEKSGIEVD 226
Query: 361 ---------LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
Y G L+ A + PMK N VV +++ ++ L ++L + +
Sbjct: 227 AFVSSTLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELGKQLFQSMP 285
Query: 412 DLD 414
D D
Sbjct: 286 DRD 288
>gi|326530063|dbj|BAK08311.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 258/422 (61%), Gaps = 9/422 (2%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+H+TF L A S L L H L +LGL ++ V +L+ MYA DLA
Sbjct: 58 PSHLTFPFLGRAAARLASPRLALSLHAHPL--RLGLLPWDLYVANSLVHMYAACALPDLA 115
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
+FD + + +WNA++DGY + D+ SA +F+ MP RD +SW+A+++G VK G
Sbjct: 116 RRLFDEIPRPNLVSWNALLDGYAKCRDLLSARCVFNRMPQRDVVSWSAMIDGCVKCGEHR 175
Query: 198 EALECFREMQISG----VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
EAL F M+ +G V + VT++SVL ACA++G LG G +HRY+ + F N+++
Sbjct: 176 EALALFEMMEAAGAGNGVRANDVTMVSVLGACAHLGDLGRGRQMHRYLQEHGFLLNLRLA 235
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRT--LVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
+L+D+Y++CG I A +VF+ + T ++ WN++I G AV+G E++E F MQ G
Sbjct: 236 TSLVDMYAKCGAISEALEVFRAVPVTTTDVLIWNAVIGGLAVHGLSMESVEIFQEMQNSG 295
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
PD +++ L+AC H GL+ + R F ++ + + P +EHY C+VD+ RAG LE+A
Sbjct: 296 VVPDEITYLVLLSACVHGGLVGEAWRLFRSLE-VQGLRPHVEHYACLVDVLGRAGHLEEA 354
Query: 372 LNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAV 431
VV++MPM+PN VLG+LL AC G + L E + + LV L P D Y+ L+N+YA
Sbjct: 355 YGVVKSMPMEPNVSVLGALLNACHLHGWVELGEVVGRQLVQLQPDHDGRYIGLSNIYAIA 414
Query: 432 GKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
+W A K R+ M+ RG++K PG S I++G +H F+A D++H S IY++L L++ ++
Sbjct: 415 RRWQEAKKARKVMEERGVKKIPGFSEIDVGGRLHRFIAHDKAHSGSREIYALLNLITVEM 474
Query: 492 KL 493
K+
Sbjct: 475 KM 476
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 165/457 (36%), Positives = 259/457 (56%), Gaps = 36/457 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S IS H + G++A A F M G +P+ +T ++L S A C G +H
Sbjct: 237 VTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICG--GRSVH 294
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + G D +++ G A++DMYAK + I
Sbjct: 295 CYMVRRGWDVGDIIAGNAIVDMYAKLSK-------------------------------I 323
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLNA 224
E+A RMFD MPVRDA+SW L+ G+++ G EA+ + MQ G++P T +SVL A
Sbjct: 324 EAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPA 383
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
+++G L G +H +K +V V +IDLY++CG ++ A +F++ +R+ W
Sbjct: 384 YSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPW 443
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G V+G +AL F+ MQ+EG PD V+F L ACSHAGL++ G +F++M+
Sbjct: 444 NAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQT 503
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P +HY C+VD++ RAG+L+DA + + NMP+KP+ + G+LL ACR G++ + +
Sbjct: 504 AYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGK 563
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ L +LDP YVL++NMYA VGKWDG ++R ++ + +QK PG SSIE+ +
Sbjct: 564 VASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSV 623
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKL--CGYVPE 499
+ F +G++ +I +H ELL K+ GYVP+
Sbjct: 624 NVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPD 660
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 120/233 (51%)
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
+F A++ Y+R G + A R FDEM RD +W A+L+G + EA+ F M +
Sbjct: 104 AFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVM 163
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
GV D VT+ SVL C +G + L +H Y +K D + VCN +ID+Y + G +E
Sbjct: 164 EGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEE 223
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
R+VF M R LV+WNSII G G V A+E F M+ G PD ++ +A +
Sbjct: 224 VRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQ 283
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
G I G M + I IVD+Y++ ++E A + ++MP++
Sbjct: 284 CGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVR 336
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 25/134 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W + IS G A+A F++M G +P+H+TF++LL+ C+
Sbjct: 440 TGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACS------------- 486
Query: 105 HGLVCKLGLDRNNVMVG-----------TALLDMYAKFGRMDLATVVFDAMRVK-SSFTW 152
H + G + N+M ++DM+ + G++D A M +K S W
Sbjct: 487 HAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIW 546
Query: 153 NAMIDGYMRRGDIE 166
A++ G++E
Sbjct: 547 GALLGACRIHGNVE 560
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 157/413 (38%), Positives = 249/413 (60%), Gaps = 4/413 (0%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WT+ IS R+G+ AEA F+ M G + + +++ CA + G M HGL
Sbjct: 234 WTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARL--EVTRNGEMCHGL 291
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ GL + + V AL+ MY+ F + A +FD+ + F+WN+MI GY++ G ++
Sbjct: 292 AFRAGLG-SRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKD 350
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +F MP +D +SWT +++G V+ EAL F MQ G++PD VT++SV++AC N
Sbjct: 351 AKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTN 410
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ +L G +H Y+ + + V + +LID+Y +CGC+E A +VF M +R WN++
Sbjct: 411 MSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAV 470
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFK-PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
IVG A+NG V ++L+ F+ M+ P+ ++FTG L+AC HAGL+E+G +F +M+ Y
Sbjct: 471 IVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKY 530
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+ P I HYGC+VDL RAG +++A N++E+MPM P+ G+LL +C GD + ER+
Sbjct: 531 HIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHGDNEVGERV 590
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ LV+LDP D + +L+N+YA+ G W +R +MK + K PG S +E
Sbjct: 591 GRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQWHVPKIPGSSVVE 643
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 170/430 (39%), Gaps = 101/430 (23%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ T L + CA + + G +H + G RN + + AL+ MY+ G + A
Sbjct: 101 PDCYTHTILAAACAT--RRAIEEGRQVHCHAVRHGFGRN-LYLANALMSMYSACGCLGDA 157
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR------------------- 178
VFDA V + +WN ++ Y++ D++ AV +F MP R
Sbjct: 158 RKVFDAGPVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVD 217
Query: 179 ------------DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
D +WTA+++ F + G F EAL F +M+ G D ++ V+ ACA
Sbjct: 218 EARKVFDVVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACA 277
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ G H + + V N LI +YS + AR++F SWNS
Sbjct: 278 RLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNS 337
Query: 287 IIVGFAVNGFV-------------------------------GEALEYFNSMQKEGFKPD 315
+I G+ NG V EAL FN+MQ +G KPD
Sbjct: 338 MIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPD 397
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V+ ++AC++ +E G + +++ ++ + + ++D+Y + G LE AL V
Sbjct: 398 EVTLVSVISACTNMSSLEQGKSMHEYIRE-HQYTITVILGTSLIDMYMKCGCLESALEVF 456
Query: 376 ENMPMK-----------------------------------PNEVVLGSLLAACRTKGDI 400
+ M + PNE+ +L+ACR G +
Sbjct: 457 DTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLV 516
Query: 401 ILAERLMKYL 410
+ K +
Sbjct: 517 EEGQHFFKLM 526
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 15/230 (6%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
++R+ + +A S +L + G L + M + PD T + ACA
Sbjct: 59 SLRLLHVVHRPNAFSCNMVLKAAREHGLPHLCLPLYASMSAA---PDCYTHTILAAACAT 115
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ G +H + ++ F N+ + N L+ +YS CGC+ AR+VF VSWN+I
Sbjct: 116 RRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVSWNTI 175
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
+ + V +A+ F M + G + + ++ G++++ + FD++++
Sbjct: 176 LAAYVQAEDVDQAVGVFARMPERG----AAAVSSMVSLFGRRGMVDEARKVFDVVER--- 228
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAAC 394
+ + ++ + R G+ +AL + +M +E V+ ++AAC
Sbjct: 229 --KDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAAC 276
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 170/485 (35%), Positives = 274/485 (56%), Gaps = 31/485 (6%)
Query: 41 TVNPTVQWTSSISRHC-RSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC----ADFPS 95
TV TV W S ++ + R G+I A F R+ P+ ++ +L+ C AD S
Sbjct: 32 TVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIP----EPDIFSYNIMLA-CYLHNADVES 86
Query: 96 QCLFL-----------GAMIHGLVCKLGLDR----------NNVMVGTALLDMYAKFGRM 134
LF MI G +D+ N + A++ Y + G +
Sbjct: 87 ARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDL 146
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
DLA +F+ V+S W AMI G+M+ G IE A + F+EMP+++ ++W A++ G+++
Sbjct: 147 DLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENC 206
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
E L+ F+ M SG P+ ++ SVL C+N+ L +G +H+ + K N+
Sbjct: 207 QAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGT 266
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
+L+ +Y +CG +E A ++F M ++ +V+WN++I G+A +G +AL F+ M+ EG KP
Sbjct: 267 SLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKP 326
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
D ++F L+AC+HAG ++ G+ YF+ M + Y V + +HY C+VDL R G+L +A+++
Sbjct: 327 DWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDL 386
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
++ MP KP+ + G+LL ACR ++ LAE K L++LDP + YV LAN+YAA+ +W
Sbjct: 387 IKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRW 446
Query: 435 DGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC 494
D +RR+MK + K PG S IE+ S +HEF +GDR H E I+ L L ++L
Sbjct: 447 DHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLA 506
Query: 495 GYVPE 499
GYVP+
Sbjct: 507 GYVPD 511
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 141/302 (46%), Gaps = 49/302 (16%)
Query: 116 NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM-RRG----------- 163
+NV+ ++ + + G ++ A VF++M VK++ TWN+M+ GY RRG
Sbjct: 3 SNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDR 62
Query: 164 --------------------DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF 203
D+ESA FD+MPV+D SW +++GF + G ++A E F
Sbjct: 63 IPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELF 122
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK----DNVKVCNTLIDL 259
M + + V+ ++++ G L + KQ F+ +V +I
Sbjct: 123 LVMPVR----NSVSWNAMISGYVESGDLDLA--------KQLFEVAPVRSVVAWTAMITG 170
Query: 260 YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
+ + G IE A + F+ M + LV+WN++I G+ N L+ F M + GF+P+ S
Sbjct: 171 FMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSL 230
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
+ L CS+ ++ G + ++ K VS I ++ +Y + G LEDA + MP
Sbjct: 231 SSVLLGCSNLSALKLGKQVHQLICK-SPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMP 289
Query: 380 MK 381
K
Sbjct: 290 QK 291
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 32/307 (10%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV-KRGYFEEALECFREMQISGV 211
N +I ++R GD+ SA+R+F+ M V+ ++W ++L G+ +RG + A + F +
Sbjct: 9 NRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIP---- 64
Query: 212 EPDYVTIISVLNAC----ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267
EPD + +++ AC A+V + R Q + NT+I +S+ G ++
Sbjct: 65 EPDIFS-YNIMLACYLHNADVESA-------RLFFDQMPVKDTASWNTMISGFSQNGMMD 116
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
AR++F M R VSWN++I G+ +G + A + F V++T +T
Sbjct: 117 QARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSV----VAWTAMITGFM 172
Query: 328 HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM---PMKPNE 384
G IE +YF+ M V+ + ++ Y + E+ L + + M +PN
Sbjct: 173 KFGKIELAEKYFEEMPMKNLVT-----WNAMIAGYIENCQAENGLKLFKRMVESGFRPNP 227
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVD--LDPGVDSNYVLLANMYAAVGKWDGAGKIRR 442
L S+L C + L +++ + + + + + LL+ MY G + A K+
Sbjct: 228 SSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLS-MYCKCGDLEDAWKLFL 286
Query: 443 TMKGRGI 449
M + +
Sbjct: 287 VMPQKDV 293
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 161/459 (35%), Positives = 269/459 (58%), Gaps = 37/459 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I+ + ++G EA F M G P+ ++ +++L C + L LG +
Sbjct: 183 VSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGD--LELGRWV 240
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
G V + G+ N+ +G+AL+ MYAK GD
Sbjct: 241 EGFVVERGMTLNSY-IGSALISMYAKC-------------------------------GD 268
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ SA R+FD M RD I+W A+++G+ + G +EA+ F M+ V + +T+ +VL+A
Sbjct: 269 LGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSA 328
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA +G L +G I Y ++ F+ ++ V LID+Y++CG + A++VF+ M ++ SW
Sbjct: 329 CATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASW 388
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEG--FKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
N++I A +G EAL F M EG +P+ ++F G L+AC HAGL+ +G R FD+M
Sbjct: 389 NAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMM 448
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
++ + P+IEHY C+VDL +RAG L +A +++E MP KP++V LG+LL ACR+K ++ +
Sbjct: 449 STLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDI 508
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
ER+++ ++++DP NY++ + +YA + W+ + ++R M+ +GI K PG S IE+ +
Sbjct: 509 GERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVEN 568
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
+HEF AGD ++S + ++++LL +LK GYVP+ V
Sbjct: 569 HLHEFHAGDGLCLDSIDLSNIIDLLYEELKREGYVPKVV 607
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 159/294 (54%), Gaps = 3/294 (1%)
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
++VF T +++I Y R G + A ++FDE+P RD +SW +++ G+ K G
Sbjct: 140 SLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAR 199
Query: 198 EALECFREM-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
EA+E F EM + G EPD ++++SVL AC +G L +G W+ +V+++ N + + L
Sbjct: 200 EAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSAL 259
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
I +Y++CG + AR++F M R +++WN++I G+A NG EA+ F++M+++ +
Sbjct: 260 ISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENK 319
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
++ T L+AC+ G ++ G + D I ++D+Y++ G L A V +
Sbjct: 320 ITLTAVLSACATIGALDLG-KQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFK 378
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
MP K NE ++++A + G A L + + D G N + + +A
Sbjct: 379 EMPQK-NEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSA 431
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 131/287 (45%), Gaps = 39/287 (13%)
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
++ AL F M + P+ T +CAN+ L H V K + +
Sbjct: 96 HYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHSLVFKLALHSDPHTTH 155
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGFK 313
+LI +YSRCG + FAR+VF + +R LVSWNS+I G+A G EA+E F M +++GF+
Sbjct: 156 SLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFE 215
Query: 314 PDGVSFTGALTACSHAGLIEDG--LRYFDIMKKI----YRVSPRIEHYGCIVDL------ 361
PD +S L AC G +E G + F + + + Y S I Y DL
Sbjct: 216 PDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRI 275
Query: 362 ------------------YSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDI 400
Y++ G ++A+++ M + N++ L ++L+AC T G +
Sbjct: 276 FDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGAL 335
Query: 401 ILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTM 444
L +++ +Y G + + L +MYA G A ++ + M
Sbjct: 336 DLGKQIDEYAS--QRGFQHDIFVATALIDMYAKCGSLASAQRVFKEM 380
>gi|15242278|ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15340, mitochondrial; Flags: Precursor
gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis thaliana]
gi|332004768|gb|AED92151.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/463 (35%), Positives = 268/463 (57%), Gaps = 13/463 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ +S R G + + F M + ++ + L CA L H
Sbjct: 77 VDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLED--LGFAQQGH 134
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G+ K+G+ +V V AL+DMY K G + +F+ + KS +W ++D ++ +
Sbjct: 135 GVAVKMGV-LTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGL 193
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLNA 224
E +F EMP R+A++WT ++ G++ G+ E LE EM G ++VT+ S+L+A
Sbjct: 194 ERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSA 253
Query: 225 CANVGTLGIGLWIHRYVLKQDFK-------DNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
CA G L +G W+H Y LK++ D+V V L+D+Y++CG I+ + VF+ M
Sbjct: 254 CAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR 313
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
KR +V+WN++ G A++G ++ F M +E KPD ++FT L+ACSH+G++++G R
Sbjct: 314 KRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWR 372
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
F ++ Y + P+++HY C+VDL RAG +E+A ++ MP+ PNEVVLGSLL +C
Sbjct: 373 CFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVH 431
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G + +AER+ + L+ + PG +L++NMY A G+ D A +R +++ RGI+K PGLSS
Sbjct: 432 GKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSS 491
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I + +H F +GDRSH ++ IY L + ++ GYVP+
Sbjct: 492 IYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDV 534
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 159/440 (36%), Positives = 261/440 (59%), Gaps = 12/440 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W S IS + G I A +M N +T+ +++ G + + + H
Sbjct: 142 ISWNSMISAYMTRGEIQSAIGLLDKMP----ERNIVTWNSVVCGLSKAGNM-----ELAH 192
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ ++ L RN V +++ Y + G + A +F M K+ +W AMI GY GD+
Sbjct: 193 SVFEQMPL-RNEV-SWNSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGYATNGDL 250
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNA 224
+SA +F+ MPV++ +SW A+++G+V F++AL F M I+G PD T+IS+L+A
Sbjct: 251 KSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSA 310
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G+L G WI+ Y+ K ++ + N LID++++CG +E A++VF M KR +++W
Sbjct: 311 CAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITW 370
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+++ G AVNG EA+ F+ M EG KPD V F L+AC+H GL+E+G R FD M +
Sbjct: 371 TTMVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQ 430
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ + PRIEHYGC+VDL RAG+LE+A+ M +KPN V+ +LL C+ G+ L +
Sbjct: 431 EFGIKPRIEHYGCMVDLLGRAGKLEEAVRFTARMHLKPNAVIWATLLFCCKIHGNGDLLK 490
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ + ++D +P S L++N+ A+ G+W+ R M+ + ++K PG SSI++G+ +
Sbjct: 491 SVTEKIMDQEPSNPSYLTLVSNLSASFGRWEDVLSFRVAMRQQRMEKVPGCSSIQVGNRV 550
Query: 465 HEFMAGDRSHIESEHIYSML 484
HEF+A D H++ + IY L
Sbjct: 551 HEFLAKDTRHVQRKEIYRAL 570
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 208/469 (44%), Gaps = 52/469 (11%)
Query: 15 LPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLH 74
L H +N + T QI I + P + SS EA ++RM
Sbjct: 9 LQHCKNIRELKQTHLQIFIHGLQHSDFMLPKLITVSSAFNLLDYATHKEALRVYSRMKAL 68
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR- 133
N TF T L C + SQ L G +IHG + KLG ++V V +LL YA
Sbjct: 69 MVEANSFTF-TFLLKCFE-TSQALEDGRVIHGEILKLGFG-SSVFVQNSLLGFYANCSEN 125
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR 193
+ A VF+ M + +WN+MI YM RG+I+SA+ + D+MP R+ ++W +++ G K
Sbjct: 126 LGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVTWNSVVCGLSKA 185
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
G E A F +M + + V+ S+++ +G + + + Q + V
Sbjct: 186 GNMELAHSVFEQMPLR----NEVSWNSMISGYVRIGDVRAA----QSIFYQMPEKTVVSW 237
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG-F 312
+I Y+ G ++ A +F M + +VSWN++I G+ N +AL F+ M G
Sbjct: 238 TAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGEC 297
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
+PD + L+AC+H G +E G ++ + K ++ I ++D++++ G +E+A
Sbjct: 298 RPDQTTLISILSACAHLGSLEHG-KWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAK 356
Query: 373 NVVENMP----------------------------------MKPNEVVLGSLLAACRTKG 398
V +M KP++V+ ++L+AC G
Sbjct: 357 EVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGG 416
Query: 399 DIILAERLMKYLVD---LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
+ +R+ +V + P ++ +Y + ++ GK + A + M
Sbjct: 417 LVEEGKRVFDQMVQEFGIKPRIE-HYGCMVDLLGRAGKLEEAVRFTARM 464
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/413 (38%), Positives = 249/413 (60%), Gaps = 4/413 (0%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WT+ IS R+G+ AEA F+ M G + + +++ CA + G M HGL
Sbjct: 234 WTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARL--EVTRNGEMCHGL 291
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ GL + + V AL+ MY+ F + A +FD+ + F+WN+MI GY++ G ++
Sbjct: 292 AFRAGLG-SRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKD 350
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +F MP +D +SWT +++G V+ EAL F MQ G++PD VT++SV++AC N
Sbjct: 351 AKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTN 410
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ +L G +H Y+ + + V + +LID+Y +CGC+E A +VF M +R WN++
Sbjct: 411 MSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAV 470
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFK-PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
IVG A+NG V ++L+ F+ M+ P+ ++FTG L+AC HAGL+E+G +F +M+ Y
Sbjct: 471 IVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKY 530
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+ P I HYGC+VDL RAG +++A N++E+MPM P+ G+LL +C GD + ER+
Sbjct: 531 HIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHGDNEVGERV 590
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ LV+LDP D + +L+N+YA+ G W +R +MK + K PG S +E
Sbjct: 591 GRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQWHVPKIPGSSVVE 643
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 170/430 (39%), Gaps = 101/430 (23%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ T L + CA + + G +H + G RN + + AL+ MY+ G + A
Sbjct: 101 PDCYTHTILAAACAT--RRAIEEGRQVHCHAVRHGFGRN-LYLANALMSMYSACGCLGDA 157
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR------------------- 178
VFDA V + +WN ++ Y++ D++ AV +F MP R
Sbjct: 158 RKVFDAGPVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVD 217
Query: 179 ------------DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
D +WTA+++ F + G F EAL F +M+ G D ++ V+ ACA
Sbjct: 218 EARKVFDGVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACA 277
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ G H + + V N LI +YS + AR++F SWNS
Sbjct: 278 RLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNS 337
Query: 287 IIVGFAVNGFV-------------------------------GEALEYFNSMQKEGFKPD 315
+I G+ NG V EAL FN+MQ +G KPD
Sbjct: 338 MIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPD 397
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V+ ++AC++ +E G + +++ ++ + + ++D+Y + G LE AL V
Sbjct: 398 EVTLVSVISACTNMSSLEQGKSMHEYIRE-HQYTITVILGTSLIDMYMKCGCLESALEVF 456
Query: 376 ENMPMK-----------------------------------PNEVVLGSLLAACRTKGDI 400
+ M + PNE+ +L+ACR G +
Sbjct: 457 DTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLV 516
Query: 401 ILAERLMKYL 410
+ K +
Sbjct: 517 EEGQHFFKLM 526
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 15/230 (6%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
++R+ + +A S +L + G L + M + PD T + ACA
Sbjct: 59 SLRLLHVVHRPNAFSCNMVLKAAREHGLPHLCLPLYASMSAA---PDCYTHTILAAACAT 115
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ G +H + ++ F N+ + N L+ +YS CGC+ AR+VF VSWN+I
Sbjct: 116 RRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVSWNTI 175
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
+ + V +A+ F M + G + + ++ G++++ + FD +++
Sbjct: 176 LAAYVQAEDVDQAVGVFARMPERG----AAAVSSMVSLFGRRGMVDEARKVFDGVER--- 228
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP---NEVVLGSLLAAC 394
+ + ++ + R G+ +AL + +M + +E V+ ++AAC
Sbjct: 229 --KDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAAC 276
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/455 (33%), Positives = 261/455 (57%), Gaps = 34/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S + + ++G +A F +M G +P +T + L CAD L G +H
Sbjct: 315 VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGD--LERGKFVH 372
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V +L L +++ V +L+ MY+K R+D+A+ +F+ +
Sbjct: 373 KFVDQLNLG-SDISVMNSLISMYSKCKRVDIASDIFNNLNG------------------- 412
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
R +SW A++ G+ + G EAL CF EM+ G++PD T++SV+ A
Sbjct: 413 ------------RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPAL 460
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A + WIH +++ N+ V L+D+YS+CG I AR++F + R +++WN
Sbjct: 461 AELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWN 520
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G+ +G AL+ F+ M+K +P+ +++ ++ACSH+GL+++GLR+F MK+
Sbjct: 521 AMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQD 580
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P ++HYG +VDL RAGR+++A + +ENMP+ P V G++L AC+ +I + E+
Sbjct: 581 YGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEK 640
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
K L +L+P +VLLAN+YA+ KW ++R+TM+ +G++K PG S +E+ + +H
Sbjct: 641 AAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVH 700
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F +G +H +S+ IY+ LE L +++K GYVP+T
Sbjct: 701 SFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDT 735
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 154/317 (48%), Gaps = 36/317 (11%)
Query: 63 EAALEF-TRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG 121
E AL F RM P F LL C D + L G IHG + NV
Sbjct: 129 ETALAFLCRMRYDDVKPVVYNFTYLLKVCGD--NADLKRGKEIHGQLITNSF-AANVFAM 185
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
T +++MYAK ++D A +MFD MP RD +
Sbjct: 186 TGVVNMYAKCRQID-------------------------------DAYKMFDRMPERDLV 214
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
SW ++ GF + G+ ++ALE MQ G PD +T+++VL A A+VG L +G IH Y
Sbjct: 215 SWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYA 274
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
++ F V + L D+YS+CG +E AR +F M ++T+VSWNS++ G+ NG +A+
Sbjct: 275 IRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAI 334
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
F M +EG P GV+ AL AC+ G +E G + ++ + I ++ +
Sbjct: 335 AVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQL-NLGSDISVMNSLISM 393
Query: 362 YSRAGRLEDALNVVENM 378
YS+ R++ A ++ N+
Sbjct: 394 YSKCKRVDIASDIFNNL 410
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 146/334 (43%), Gaps = 48/334 (14%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAIS--WTALLNGFVKRGYFEEALECFREMQISGVE 212
++ + + G I A R+F+ P+ D + + +L G+ K E AL M+ V+
Sbjct: 87 LVSLFSKYGSINEAARVFE--PIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVK 144
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P +L C + L G IH ++ F NV ++++Y++C I+ A ++
Sbjct: 145 PVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKM 204
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL- 331
F RM +R LVSWN+II GF+ NGF +ALE MQ EG +PD ++ L A + GL
Sbjct: 205 FDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLL 264
Query: 332 ----------------------------------IEDGLRYFDIMKKIYRVSPRIEHYGC 357
+E FD M + VS +
Sbjct: 265 MVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVS-----WNS 319
Query: 358 IVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
++D Y + G E A+ V E M + P V + L AC GD+ + + K++ L+
Sbjct: 320 MMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLN 379
Query: 415 PGVDSNYV-LLANMYAAVGKWDGAGKIRRTMKGR 447
G D + + L +MY+ + D A I + GR
Sbjct: 380 LGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR 413
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 168/462 (36%), Positives = 258/462 (55%), Gaps = 17/462 (3%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + I+ + ++G I EA F +H T+ ++SG
Sbjct: 242 VRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDV----FTWTAMVSG--------YIQN 289
Query: 102 AMIHGLVCKLGLDR---NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
M+ + DR N + A+L Y + R+++A +FD M ++ TWN MI G
Sbjct: 290 RMVEE--ARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITG 347
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + G I A +FD+MP RD +SW A++ G+ + G+ EAL F M+ G + +
Sbjct: 348 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSF 407
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
S L+ CA+V L +G +H ++K ++ V N L+ +Y +CG IE A +F+ M
Sbjct: 408 SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG 467
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +VSWN++I G++ +GF EAL +F SM++EG KPD + L+ACSH GL++ G +Y
Sbjct: 468 KDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQY 527
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M + Y V P +HY C+VDL RAG LE+A N+++NMP +P+ + G+LL A R G
Sbjct: 528 FHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHG 587
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
+ LAE + ++P YVLL+N+YA+ G+W GK+R M+ +G++K PG S I
Sbjct: 588 NTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWI 647
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
EI + H F GD H E + I++ LE L +K GYV +T
Sbjct: 648 EIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKT 689
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 191/459 (41%), Gaps = 59/459 (12%)
Query: 28 TPQISIQTNNSKSTVNP--------TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPN 79
+ + S QT KS P +W +IS + R+GR +EA F RM +
Sbjct: 34 SSKSSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSS--- 90
Query: 80 HITFITLLSGC-------------ADFPSQCLF-LGAMIHGLVCKLGLDR---------- 115
+++ ++SG + P + L MI G V L +
Sbjct: 91 -VSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPE 149
Query: 116 NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM 175
+V +L YA+ G +D A VFD M K+ +WNA++ Y++ +E A +F
Sbjct: 150 RDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSR 209
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
+SW LL GFVK+ EA + F M++ D V+ +++ A G +
Sbjct: 210 ENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVR----DVVSWNTIITGYAQNGEIDEA- 264
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
R + + +V ++ Y + +E AR++F RM +R VSWN+++ G+
Sbjct: 265 ---RQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGE 321
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
V A E F+ M ++ +T + G I + FD M K VS +
Sbjct: 322 RVEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMPKRDPVS-----W 372
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII---LAERLMKYLVD 412
++ YS++G +AL + M + + S +A T D++ L ++L LV
Sbjct: 373 AAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 432
Query: 413 --LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+ G LL MY G + A + + M G+ I
Sbjct: 433 GGYETGCFVGNALLL-MYCKCGSIEEANDLFKEMAGKDI 470
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/459 (36%), Positives = 261/459 (56%), Gaps = 35/459 (7%)
Query: 43 NP-TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP + W I GR + +++M G P+ F L CA L G
Sbjct: 780 NPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSD--LQRG 837
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+IH + G N++ V AL+DMYAK
Sbjct: 838 KVIHQHLVCCGCS-NDLFVDAALVDMYAKC------------------------------ 866
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
GDIE+A +FD+M VRD +SWT++++G+ GY E L F M+ SGV P+ V+I+SV
Sbjct: 867 -GDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSV 925
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L AC N+G L G W H YV++ F+ ++ V ++D+YS+CG ++ AR +F + L
Sbjct: 926 LLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDL 985
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
V W+++I + ++G +A++ F+ M K G +P V+FT L+ACSH+GL+E+G YF +
Sbjct: 986 VCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQL 1045
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M + + ++ ++ +Y C+VDL RAG+L +A++++ENMP++P+ + GSLL ACR ++
Sbjct: 1046 MTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLD 1105
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LAE++ +L LDP +VLL+N+YAA +W+ K+R+ M RG K G S +E
Sbjct: 1106 LAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYD 1165
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ +H+F GDRSH + E +Y+ LE L+ +K GYVP T
Sbjct: 1166 NQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLT 1204
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/463 (34%), Positives = 247/463 (53%), Gaps = 35/463 (7%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
SK + W++ I+ + + EA F M PN +T ++ L CA S+
Sbjct: 265 SKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACA--VSRN 322
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L G IH + G + + V TAL+DMY
Sbjct: 323 LEEGKKIHKIAVWKGFELD-FSVSTALIDMY----------------------------- 352
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
M+ + AV +F +P +D +SW ALL+G+ + G +++ FR M G++PD V
Sbjct: 353 --MKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVA 410
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++ +L A + +G L +H YV++ F NV V +LI+LYS+CG + A ++F+ M
Sbjct: 411 VVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMI 470
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGL 336
R +V W+S+I + ++G GEALE F+ M K +P+ V+F L+ACSHAGL+E+GL
Sbjct: 471 VRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGL 530
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+ FD M Y++ P EH+G +VDL R G+L A++++ MP+ V G+LL ACR
Sbjct: 531 KIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRI 590
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
+I + E K L LDP Y+LL+N+YA GKWD ++R +K RG++K G S
Sbjct: 591 HHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQS 650
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+E+ G+H F+A DR H +S+ IY +L L + Y+P+
Sbjct: 651 MVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPD 693
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 213/468 (45%), Gaps = 85/468 (18%)
Query: 41 TVNPTVQ-WTSSISRHCRSGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCL 98
T +P V W S++ +CR + E F M G P++ T L CA + L
Sbjct: 62 TPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGL--RML 119
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
LG +IHG K +++ VG+AL+++Y+K G+M
Sbjct: 120 ELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMG----------------------- 156
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVT 217
A+++F+E D + WT+++ G+ + EEAL F +M + V D VT
Sbjct: 157 --------EALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVT 208
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++SV++ACA + + G +H V++++F ++ + N+L++LY++ GC + A +F +M
Sbjct: 209 LVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMP 268
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
++ ++SW+++I +A N EAL F+ M ++ F+P+ V+ AL AC+ + +E+G
Sbjct: 269 EKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEG-- 326
Query: 338 YFDIMKKIYRVSP------RIEHYGCIVDLYSRAGRLEDALNVVENMPMK---------- 381
KKI++++ ++D+Y + ++A+++ + +P K
Sbjct: 327 -----KKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLS 381
Query: 382 ------------------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGV 417
P+ V + +LAA G A L Y+V G
Sbjct: 382 GYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVV--RSGF 439
Query: 418 DSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+SN + A++ K G + KG ++ SS+ GIH
Sbjct: 440 NSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIH 487
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 115/214 (53%), Gaps = 3/214 (1%)
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y+ I++A +F+++P + W ++ GF G F +LE + +M G++PD
Sbjct: 762 YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAF 821
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
L +CA + L G IH++++ +++ V L+D+Y++CG IE AR VF +M
Sbjct: 822 PFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAV 881
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R LVSW S+I G+A NG+ E L +F+ M+ G P+ VS L AC + G + G +
Sbjct: 882 RDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWF 941
Query: 339 FD-IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
+++ + + I+D+YS+ G L+ A
Sbjct: 942 HSYVIQTGFEFDILVA--TAIMDMYSKCGSLDLA 973
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 124/270 (45%), Gaps = 22/270 (8%)
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
L + VF + +F + Y + +++A ++FDE P + W + L + +
Sbjct: 23 LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82
Query: 196 FEEALECFREM-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD-FKDNVKVC 253
+EE L F M +G PD TI L ACA + L +G IH + K D ++ V
Sbjct: 83 WEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVG 142
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGF 312
+ L++LYS+CG + A +VF+ + V W S++ G+ N EAL F+ M +
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCV 202
Query: 313 KPDGVSFTGALTACSH-----AGLIEDGL---RYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
D V+ ++AC+ AG GL R FD + +++LY++
Sbjct: 203 VLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFD---------GDLPLVNSLLNLYAK 253
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
G + A N+ MP K +V+ S + AC
Sbjct: 254 TGCEKIAANLFSKMPEK--DVISWSTMIAC 281
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 115/253 (45%), Gaps = 38/253 (15%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K V V WTS IS + +G +E F M G PN ++ +++L C + + L
Sbjct: 878 KMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGA--L 935
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G H V + G + +++V TA++DMY+K G +DLA +FD K W+AMI
Sbjct: 936 RKGEWFHSYVIQTGFEF-DILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIAS 994
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y G A+ +FD+M VK +GV P +VT
Sbjct: 995 YGIHGHGRKAIDLFDQM---------------VK----------------AGVRPSHVTF 1023
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRM 276
VL+AC++ G L G ++ ++ ++F K+ N ++DL R G + A + + M
Sbjct: 1024 TCVLSACSHSGLLEEGK-MYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENM 1082
Query: 277 HKRTLVS-WNSII 288
S W S++
Sbjct: 1083 PVEPDASIWGSLL 1095
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
++ + AC N ++ +H V K + L LY++C ++ AR+VF
Sbjct: 6 VLVDLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDET 62
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDG 335
+ WNS + + E L F+ M G PD + AL AC+ G
Sbjct: 63 PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACA-------G 115
Query: 336 LRYFDIMKKIYRVSPRIEHYG-------CIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
LR ++ K I+ + + + G +V+LYS+ G++ +AL V E +P+ V+
Sbjct: 116 LRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEF-QRPDTVLWT 174
Query: 389 SLLAACRTKGD-----IILAERLMKYLVDLDP 415
S++ + D + ++ +M V LDP
Sbjct: 175 SMVTGYQQNNDPEEALALFSQMVMMDCVVLDP 206
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 96/247 (38%), Gaps = 60/247 (24%)
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
H + + + ++ +Y I+ A VF+ + WN +I GFA +G
Sbjct: 740 HAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRF 799
Query: 298 GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC 357
+LE ++ M ++G KPD +F AL +C AGL + +++ + + GC
Sbjct: 800 LSSLELYSKMMEKGLKPDKFAFPFALKSC--AGLSD--------LQRGKVIHQHLVCCGC 849
Query: 358 ---------IVDLYSRAGRLEDALNVVENMPMK--------------------------- 381
+VD+Y++ G +E A V + M ++
Sbjct: 850 SNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDL 909
Query: 382 -------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLA----NMYAA 430
PN V + S+L AC G + E Y++ D +L+A +MY+
Sbjct: 910 MRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFD---ILVATAIMDMYSK 966
Query: 431 VGKWDGA 437
G D A
Sbjct: 967 CGSLDLA 973
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 270/490 (55%), Gaps = 42/490 (8%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
V V W ++ + + G + +A M G + +T LL+ AD ++ L L
Sbjct: 318 AVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAAD--TRDLVL 375
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK------------- 147
G H K + +V+V + ++DMYAK GRMD A VF +R K
Sbjct: 376 GMKAHAYCVKNDFE-GDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACA 434
Query: 148 ----------------------SSFTWNAMIDGYMRRGDIESAVRMFDEM----PVRDAI 181
+ +WN++I G+ + G + A MF EM + + I
Sbjct: 435 EQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSGVMPNLI 494
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
+WT +++G V+ G+ A+ FREMQ G+ P+ ++I S L+ C ++ L G IH YV
Sbjct: 495 TWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYV 554
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
+++D ++ + +++D+Y++CG ++ A+ VF+ + L +N++I +A +G EAL
Sbjct: 555 MRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQAREAL 614
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
F M+KEG PD ++ T L+ACSH GL+++G++ F M ++ P EHYGC+V L
Sbjct: 615 VLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHYGCLVKL 674
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
+ G+L++AL + MP P+ +LGSLL AC DI LA+ + K+L+ LDP NY
Sbjct: 675 LANDGQLDEALRTILTMPSHPDAHILGSLLTACGQNNDIELADYIAKWLLKLDPDNSGNY 734
Query: 422 VLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIY 481
V L+N+YAAVGKWD +R MK +G++K PG S IE+G +H F+A DRSH ++E IY
Sbjct: 735 VALSNVYAAVGKWDKVSNLRGLMKEKGLRKIPGCSWIEVGQELHVFIASDRSHPKTEEIY 794
Query: 482 SMLELLSFDL 491
L+LL F++
Sbjct: 795 VTLDLLGFEM 804
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 205/475 (43%), Gaps = 80/475 (16%)
Query: 39 KSTVNPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
+ + +P V W + I H R+G EA + +M G P++ +L C +
Sbjct: 112 RDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVL--KW 169
Query: 98 LFLGAMIHGLVCK-LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMI 156
+ G +H V K +GL + V V T+L+DMY K G ++ A VFD M ++ TWN+M+
Sbjct: 170 VRFGKGVHAFVVKTIGL-KECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMV 228
Query: 157 DGYMRRGDIESAVRMFDEMPVR-------------------------------------- 178
Y + G + A+R+F EM ++
Sbjct: 229 VTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLE 288
Query: 179 -DAISWTALLNGFVKRGYFEEALECFREMQIS---------------------------- 209
D + ++++N + K G EEA FR M +
Sbjct: 289 LDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVM 348
Query: 210 ---GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
G+ D VT+ ++L A+ L +G+ H Y +K DF+ +V V + +ID+Y++CG +
Sbjct: 349 REEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRM 408
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
+ AR+VF + K+ +V WN+++ A G GEAL+ F MQ E P+ VS+ +
Sbjct: 409 DCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGF 468
Query: 327 SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPN 383
G + + F M V P + + ++ + G A+ V M ++PN
Sbjct: 469 FKNGQVAEARNMFAEMCS-SGVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPN 527
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL-LANMYAAVGKWDGA 437
+ + S L+ C + + + Y++ D + + + +MYA G DGA
Sbjct: 528 SMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGA 582
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 198/455 (43%), Gaps = 73/455 (16%)
Query: 33 IQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD 92
+ ++ T+ P + S C+ GRI EA T+M + + TLL GC
Sbjct: 4 LAPSHPPQTLTPNQFSLTHFSSLCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCV- 62
Query: 93 FPSQCLFLGAMIHGLVCKLGLDRN-NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT 151
+ L L +H V K G N V + L+ +YAK G + AT +F + F+
Sbjct: 63 -YERALPLALQLHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFS 121
Query: 152 WNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV 211
W A+I + R G+ EEAL + +MQ G+
Sbjct: 122 WAAIIGLHTR-------------------------------TGFCEEALFGYIKMQQDGL 150
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFAR 270
PD + +VL AC + + G +H +V+K K+ V V +L+D+Y +CG +E A
Sbjct: 151 PPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAG 210
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA- 329
+VF M +R V+WNS++V +A NG EA+ F M+ +G + V+ +G TAC+++
Sbjct: 211 KVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSE 270
Query: 330 ---------------GLIEDGLRYFDIMKKIYRVS--------------PRIEHYGCIVD 360
GL D + IM ++V + + +V
Sbjct: 271 AVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVA 330
Query: 361 LYSRAGRLEDALN---VVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGV 417
Y++ G +E AL V+ ++ + V L +LLA D++L + Y V D
Sbjct: 331 GYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKND--F 388
Query: 418 DSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
+ + V+ + +MYA G+ D A ++ ++ + I
Sbjct: 389 EGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDI 423
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 135/319 (42%), Gaps = 18/319 (5%)
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ-- 244
+ K G EA+ +M + ++L C L + L +H V+K+
Sbjct: 23 FSSLCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGP 82
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
F N V + L+ LY++CG E A ++F+ + SW +II GF EAL +
Sbjct: 83 TFALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGY 142
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
MQ++G PD L AC + G + K + + +VD+Y +
Sbjct: 143 IKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGK 202
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG---DIILAERLMKYLVDLDPGVDSNY 421
G +EDA V + M + N+V S++ G + I R M+ GV+
Sbjct: 203 CGAVEDAGKVFDEMSER-NDVTWNSMVVTYAQNGMNQEAIRVFREMRL-----QGVEVTL 256
Query: 422 VLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI-GSGIHEFMAGDRSHIESEHI 480
V L+ + A + G+ R +G G+ GL + GS I F E+E +
Sbjct: 257 VALSGFFTACANSEAVGEGR---QGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVV 313
Query: 481 Y---SMLELLSFDLKLCGY 496
+ ++ ++++++L + GY
Sbjct: 314 FRNMAVKDVVTWNLVVAGY 332
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/353 (41%), Positives = 221/353 (62%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
A++D Y + G+++ A R+FD M RD ++W+A+++G+ + EAL F EMQ + V
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P+ VT++SVL+ACA +G L G W+H Y+ ++D V + L+D Y++CGCI+ A +
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKA 430
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F+ M R +W ++I G A NG EALE F+SM + +P V+F G L ACSH L+
Sbjct: 431 FESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLV 490
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
E+G R+F M + Y + PRIEHYGC+VDL RAG +++A + NMP++PN VV +LL+
Sbjct: 491 EEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLS 550
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
AC ++ + E +K +V LDP NY+LL+N YA+VG+W A +R+ MK +G++K
Sbjct: 551 ACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKI 610
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGEL 505
PG S IE+ I EF A D H + IY + + ++K+ GY+P T L
Sbjct: 611 PGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARL 663
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 130/233 (55%), Gaps = 3/233 (1%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F N++I Y GD+ +A +F + V+ I+W A++ G+VK G ++E +E F+ M
Sbjct: 207 FVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEV 266
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
D VT++SV AC +G +G WI Y ++ + + L+D+Y++CG ++ A
Sbjct: 267 RAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKA 326
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
R++F RMH R +V+W+++I G+ + EAL FN MQ P+ V+ L+AC+
Sbjct: 327 RRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVL 386
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYG-CIVDLYSRAGRLEDALNVVENMPMK 381
G +E G +++ + P G +VD Y++ G ++DA+ E+MP++
Sbjct: 387 GALETGKWVHSYIRR--KDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVR 437
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 138/322 (42%), Gaps = 47/322 (14%)
Query: 168 AVRMFD--EMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNA 224
A+R+F P R A S+ L+ F++ G+ E+AL F EM + V PD T+ + + +
Sbjct: 121 AIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKS 180
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+ + L +G + Y K+ F + V N+LI +Y+ CG + A +F + + +++W
Sbjct: 181 CSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAW 240
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC------------------ 326
N++I G+ NG E +E F M + D V+ TAC
Sbjct: 241 NAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEE 300
Query: 327 -----------------SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
+ G ++ R FD M S + + ++ Y+++ R
Sbjct: 301 KGMLRSRNLATALVDMYAKCGELDKARRLFDRMH-----SRDVVAWSAMISGYTQSDRCR 355
Query: 370 DALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD-PGVDSNYVLLA 425
+AL + M + PN+V + S+L+AC G + + + Y+ D P L
Sbjct: 356 EALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALV 415
Query: 426 NMYAAVGKWDGAGKIRRTMKGR 447
+ YA G A K +M R
Sbjct: 416 DFYAKCGCIKDAVKAFESMPVR 437
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 116/259 (44%), Gaps = 40/259 (15%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ IS + +S R EA F M NPN +T +++LS CA + L G +H
Sbjct: 339 VAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGA--LETGKWVH 396
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + L V++GTAL+D YAK G + A F++M V++++TW A+I
Sbjct: 397 SYIRRKDLPLT-VILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALI--------- 446
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
G G EALE F M + +EP VT I VL AC
Sbjct: 447 ----------------------KGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLAC 484
Query: 226 ANVGTLGIGLWIHRYVLKQDFK--DNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLV 282
++ G L H + QD+ ++ ++DL R G I+ A Q + M + V
Sbjct: 485 SH-GCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAV 543
Query: 283 SWNSIIVGFAV--NGFVGE 299
W +++ V N +GE
Sbjct: 544 VWRALLSACTVHKNVEIGE 562
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 168/477 (35%), Positives = 267/477 (55%), Gaps = 70/477 (14%)
Query: 52 ISRHCRSGRIAEAALEFTRMTLHGTNPNHIT--FITLLSGCADFPSQCLFLGAMIHGLVC 109
I ++G +A L F ++ G +P++ T F+ GC + G ++G V
Sbjct: 104 IKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVRE----GEKVYGFVV 159
Query: 110 KLGLDRNNVMVGTALLDMYAKFGRM----------------------------------- 134
K GL+ + V +L+DMYA+ GR+
Sbjct: 160 KSGLEFDT-YVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAV 218
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
D+ +F+ M +K+ W +M+ GY+ G ++ A +F+ PVRD + WTA++NG+V+
Sbjct: 219 DVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFN 278
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
F++A+ FREMQI V PD T++++L A VGT
Sbjct: 279 RFDDAVALFREMQIKRVSPDRFTLVALLTD-AVVGT------------------------ 313
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
LI++Y++CG IE + ++F + ++ SW SII G A+NG +ALE F M + G KP
Sbjct: 314 ALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKP 373
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
D ++F G L+ACSH GL+E+G ++F M +Y++ P++EHYGC++DL RAG+L++A +
Sbjct: 374 DDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEEL 433
Query: 375 VENMPMKPNEVVL---GSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAV 431
+E P NEV++ G+LL+ACRT G++ + ER+ K LV ++ G S + LLAN+YA+
Sbjct: 434 IEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASA 493
Query: 432 GKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
+W+ K+RR MK G++K PG SS+E+ +HEF+ GD SH E IYSML+ ++
Sbjct: 494 DRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIA 550
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 119/235 (50%), Gaps = 12/235 (5%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G++ A R+F+ + + + ++ F K G F +A+ FR+++ G+ PD T V
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
A +G + G ++ +V+K + + VCN+L+D+Y+ G ++ RQVF+ M +R +V
Sbjct: 140 KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVV 199
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN +I G+ +A++ F + + + +T ++ + G +++
Sbjct: 200 SWNVLISGYVKCRRYEDAVDVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDEA------- 252
Query: 343 KKIYRVSP--RIEHYGCIVDLYSRAGRLEDALNVVENMPMK---PNEVVLGSLLA 392
++++ SP + + +++ Y + R +DA+ + M +K P+ L +LL
Sbjct: 253 RELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLT 307
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/461 (35%), Positives = 262/461 (56%), Gaps = 36/461 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + IS + +G EA F M P+ T +T++S CA S + LG
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQ--SGSIELG 285
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + G N +V N+++D Y +
Sbjct: 286 RQVHSWIDDHGFGSNLKIV--------------------------------NSLMDLYSK 313
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++E+A +F+ + +D ISW L+ G+ ++EAL F+EM SG P+ VT++S+
Sbjct: 314 CGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSI 373
Query: 222 LNACANVGTLGIGLWIHRYVLK--QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACA++G + IG WIH Y+ K + + + +LID+Y++CG IE A QVF + +
Sbjct: 374 LPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 433
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+L SWN++I GFA++G A + F+ M+K G +PD ++F G L+ACS +G+++ G F
Sbjct: 434 SLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIF 493
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M + Y+++P++EHYGC++DL +G ++A ++ NM M+P+ V+ SLL AC+ +G+
Sbjct: 494 RTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGN 553
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E + L+ ++P YVLL+N+YA G+W+ KIR + +G++K PG SSIE
Sbjct: 554 VELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIE 613
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I S +HEF+ GD+ H + IY MLE + L+ G+VP+T
Sbjct: 614 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDT 654
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 215/403 (53%), Gaps = 14/403 (3%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + H S A + M G PN TF LL CA S+ G IHG
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK--SKAFKEGQQIHGH 159
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG D + + V T+L+ +Y + GR++ A VFD + ++ A+I GY RG IES
Sbjct: 160 VLKLGYDLD-LFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIES 218
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++FDE+PV+D +SW A+++G+ + G ++EALE F+EM + + PD T+++V++ACA
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQ 278
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G++ +G +H ++ F N+K+ N+L+DLYS+CG +E A +F+ + + ++SWN++
Sbjct: 279 SGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTL 338
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KKI 345
I G+ EAL F M + G +P+ V+ L AC+H G I+ G R+ + K++
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIG-RWIHVYIDKRL 397
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSLLAACRTKGDII 401
+ ++D+Y++ G +E A V ++ K N ++ G + R
Sbjct: 398 KSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG-RADAAFD 456
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
+ R+ K ++ D D +V L + + G D I RTM
Sbjct: 457 IFSRMRKIGIEPD---DITFVGLLSACSRSGMLDLGRHIFRTM 496
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 167/406 (41%), Gaps = 56/406 (13%)
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM---YAKFGRMD 135
NH + ++LL C S +IH + K GL N + + LL++ F +
Sbjct: 33 NHPS-LSLLHNCKTLQSL-----RLIHAQMIKTGLHNTNYAL-SKLLELCVISPHFDGLP 85
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP----VRDAISWTALLNGFV 191
A VF+ ++ + WN M G+ D SA++++ M + ++ ++ LL
Sbjct: 86 YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCA 145
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
K F+E + + G + D S+++ G L R V + +V
Sbjct: 146 KSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDA----RKVFDRSPHRDVV 201
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
LI Y+ G IE A+++F + + +VSWN++I G+A G EALE F M K
Sbjct: 202 SYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTN 261
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
+PD + ++AC+ +G IE G + + + ++ ++DLYS+ G LE A
Sbjct: 262 IRPDESTMVTVVSACAQSGSIELGRQVHSWIDD-HGFGSNLKIVNSLMDLYSKCGELETA 320
Query: 372 LNVVENMPMK----------------------------------PNEVVLGSLLAACRTK 397
+ E + K PN+V + S+L AC
Sbjct: 321 CGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHL 380
Query: 398 GDIILAERLMKYL---VDLDPGVDSNYVLLANMYAAVGKWDGAGKI 440
G I + + Y+ + S L +MYA G + A ++
Sbjct: 381 GAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQV 426
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 127/281 (45%), Gaps = 31/281 (11%)
Query: 209 SGVEPDYVTI-----ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL---Y 260
S +P Y ++ +S+L+ C + +L + IH ++K + + L++L
Sbjct: 22 SSSDPPYDSLRNHPSLSLLHNCKTLQSLRL---IHAQMIKTGLHNTNYALSKLLELCVIS 78
Query: 261 SRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT 320
+ +A VF+ + + L+ WN++ G A++ AL+ + M G P+ +F
Sbjct: 79 PHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFP 138
Query: 321 GALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
L +C+ + ++G + + ++K Y + + + ++ +Y + GRLEDA V + P
Sbjct: 139 FLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFV--HTSLISVYVQNGRLEDARKVFDRSP 196
Query: 380 MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD-SNYVLLANMYAAVGKWDGAG 438
+ + V +L+ ++G I A++L D P D ++ + + YA G + A
Sbjct: 197 HR-DVVSYTALIKGYASRGYIESAQKLF----DEIPVKDVVSWNAMISGYAETGNYKEAL 251
Query: 439 KIRRTMKGRGIQKKPGL-----------SSIEIGSGIHEFM 468
++ + M I+ SIE+G +H ++
Sbjct: 252 ELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWI 292
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/455 (37%), Positives = 266/455 (58%), Gaps = 42/455 (9%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + IS + ++G + + F RM PN IT T+LS CA LG +
Sbjct: 194 VSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAK-------LGDLEM 246
Query: 106 GL-VCKLGLDRN---NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
GL + KL ++N N++V TA+L+MY K G +D DG +
Sbjct: 247 GLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVD---------------------DGRL- 284
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+FD M RD ++W+A++ G+ + G EALE F M+ + ++P+ VT++SV
Sbjct: 285 ---------VFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSV 335
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+ACA +G++ G I YV + NV V + L+ +YS+CG I ARQ+F ++ +R
Sbjct: 336 LSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDN 395
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
V+WNS+I+G A+NGF +A+ +N M++ KP+ ++F G +TAC+HAG +E GL +F
Sbjct: 396 VTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRS 455
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M+ + +SP IEH+ CIVDL+ R+GRL DA + M ++PN V+ G+LL+A R ++
Sbjct: 456 MRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVE 515
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LAE K L++L+P NYV+L+N+YA+ G+W A K+R+ MK + +QK S +E+
Sbjct: 516 LAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVE 575
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGY 496
+H+F+ GD SH S+ +YS ++ L+ GY
Sbjct: 576 DRVHKFLVGDTSHPRSDEVYSTIDGLALLSTWVGY 610
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 173/323 (53%), Gaps = 18/323 (5%)
Query: 69 TRMTLHGTNPNHITFIT--LLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD 126
T +++H N + F + CA + + +G +H LV + G ++V AL++
Sbjct: 83 TFVSMHQNNVRIVCFTIPPIFKSCASLLA--IDVGKQVHSLVIRYGF-HSSVFCQNALIN 139
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTAL 186
YAK + A ++FD + VK + +N +I Y R G++ +A +FD+M R +SW A+
Sbjct: 140 FYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAM 199
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
++ + + G + + F+ MQ EP+ +T+ +VL+ CA +G L +GL I + ++
Sbjct: 200 ISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNL 259
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
N+ V ++++Y +CG ++ R VF M +R +V+W+++I G+A NG EALE F +
Sbjct: 260 GSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFEN 319
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLR---YFD---IMKKIYRVSPRIEHYGCIVD 360
M+ KP+ V+ L+AC+ G +E G R Y + ++ +Y S ++
Sbjct: 320 MKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASA-------LLG 372
Query: 361 LYSRAGRLEDALNVVENMPMKPN 383
+YS+ G + A + + +P + N
Sbjct: 373 MYSKCGNIIKARQIFDKLPQRDN 395
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 147/352 (41%), Gaps = 72/352 (20%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A ++FD++P D + + + + EAL F M + V TI + +
Sbjct: 46 IQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKS 105
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL------------------------- 259
CA++ + +G +H V++ F +V N LI+
Sbjct: 106 CASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAY 165
Query: 260 ------YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
YSR G + AR++F +M R++VSWN++I +A NG + F MQ E +
Sbjct: 166 NCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCE 225
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDI---------------MKKIYRVSPRIEH---- 354
P+ ++ L+ C+ G +E GLR + M ++Y ++
Sbjct: 226 PNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLV 285
Query: 355 -----------YGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDI 400
+ ++ Y++ GR +AL + ENM +KPN+V L S+L+AC G +
Sbjct: 286 FDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSV 345
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
ER+ Y+ + L++N+Y A K +K R I K
Sbjct: 346 ETGERIGSYV--------ESRGLISNVYVASALLGMYSKCGNIIKARQIFDK 389
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 36/246 (14%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I+ + ++GR EA F M PN +T +++LS CA S + G I
Sbjct: 294 VVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGS--VETGERI 351
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
V GL +NV V +ALL MY+K G +
Sbjct: 352 GSYVESRGL-ISNVYVASALLGMYSKCG-------------------------------N 379
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I A ++FD++P RD ++W +++ G G+ E+A+ + M+ V+P+ +T + ++ A
Sbjct: 380 IIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTA 439
Query: 225 CANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLV 282
C + G + +GL R + + N++ ++DL+ R G + A + RM + +V
Sbjct: 440 CTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVV 499
Query: 283 SWNSII 288
W +++
Sbjct: 500 IWGTLL 505
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 171/460 (37%), Positives = 261/460 (56%), Gaps = 11/460 (2%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
V V W + I+ + +SG+I EA F + T+ ++SG + +
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV----FTWTAMVSG---YIQNRMVE 298
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
A L K+ +RN V A+L Y + RM++A +FD M ++ TWN MI GY
Sbjct: 299 EA--RELFDKMP-ERNEV-SWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYA 354
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G I A +FD+MP RD +SW A++ G+ + G+ EAL F +M+ G + + S
Sbjct: 355 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
L+ CA+V L +G +H ++K ++ V N L+ +Y +CG IE A +F+ M +
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+VSWN++I G++ +GF AL +F SM++EG KPD + L+ACSH GL++ G +YF
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFY 534
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + Y V P +HY C+VDL RAG LEDA N+++NMP +P+ + G+LL A R G+
Sbjct: 535 TMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNT 594
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
LAE + ++P YVLL+N+YA+ G+W GK+R M+ +G++K PG S IEI
Sbjct: 595 ELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEI 654
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ H F GD H E + I++ LE L +K GYV +T
Sbjct: 655 QNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKT 694
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 191/460 (41%), Gaps = 55/460 (11%)
Query: 23 QNLTTTPQISIQTNNSKSTV----NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNP 78
+L Q IQ + +K + + +W +IS + R+GR EA F RM +
Sbjct: 38 HSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSS-- 95
Query: 79 NHITFITLLSGC-------------ADFPSQCLF-LGAMIHGLVCKLGLDR--------- 115
+++ ++SG + P + L MI G V L +
Sbjct: 96 --VSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMP 153
Query: 116 -NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDE 174
+V +L YA+ G +D A VFD M K+ +WNA++ Y++ +E A +F
Sbjct: 154 ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS 213
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
+SW LL GFVK+ EA + F M + D V+ +++ A G +
Sbjct: 214 RENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEA 269
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
R + + +V ++ Y + +E AR++F +M +R VSWN+++ G+
Sbjct: 270 ----RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG 325
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
+ A E F+ M ++ +T + G I + FD M K VS
Sbjct: 326 ERMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMPKRDPVS----- 376
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII---LAERLMKYLV 411
+ ++ YS++G +AL + M + + S +A T D++ L ++L LV
Sbjct: 377 WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436
Query: 412 D--LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+ G LL MY G + A + + M G+ I
Sbjct: 437 KGGYETGCFVGNALLL-MYCKCGSIEEANDLFKEMAGKDI 475
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/464 (35%), Positives = 258/464 (55%), Gaps = 34/464 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I + +SG A L F +M G P ++T + L CAD L G +H
Sbjct: 198 VSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGD--LERGKFVH 255
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
LV +L LD ++V V +L+ MY+K R+D+A +F +R K+
Sbjct: 256 KLVDQLKLD-SDVSVMNSLISMYSKCKRVDIAADIFKNLRNKT----------------- 297
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+SW A++ G+ + G EAL F EMQ ++PD T++SV+ A
Sbjct: 298 --------------LVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPAL 343
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A + WIH V+++ NV V L+D+Y++CG I AR++F M+ R +++WN
Sbjct: 344 AELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWN 403
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G+ +G ++E F M+K KP+ ++F AL+ACSH+GL+E+GL +F+ MKK
Sbjct: 404 AMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKD 463
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P ++HYG +VDL RAGRL A + ++ MP+KP V G++L AC+ ++ L E+
Sbjct: 464 YGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEK 523
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ L+P +VLLAN+YA W K+R M+ G+QK PG S +EIG+ +H
Sbjct: 524 AAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVH 583
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
F +G SH +S+ IYS LE L +++ GYVP+T + E+D
Sbjct: 584 SFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTNSIHDVEDD 627
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 162/344 (47%), Gaps = 39/344 (11%)
Query: 55 HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLD 114
+ +S + A F+RM P F LL C D + L G IHG V G
Sbjct: 5 YAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGD--NSDLKRGKEIHGSVITSGFS 62
Query: 115 RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDE 174
N + T +++MYAK + I A MFD
Sbjct: 63 WN-LFAMTGVVNMYAKCRQ-------------------------------INDAYNMFDR 90
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
MP RD + W +++G+ + G+ + AL M G PD +TI+S+L A A+ L IG
Sbjct: 91 MPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIG 150
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
+ +H YVL+ F+ V V L+D+YS+CG + AR +F M RT+VSWNS+I G+ +
Sbjct: 151 MAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQS 210
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
G A+ F M EG +P V+ GAL AC+ G +E G ++ ++ ++ +
Sbjct: 211 GDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQL-KLDSDVSV 269
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSLLAAC 394
++ +YS+ R++ A ++ +N+ K N ++LG C
Sbjct: 270 MNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGC 313
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 38/298 (12%)
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
+L G+ K + AL F M+ V P +L C + L G IH V+
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
F N+ ++++Y++C I A +F RM +R LV WN++I G+A NGF AL
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGL-------------------RYFDIMKKIY 346
M +EG +PD ++ L A + L+ G+ D+ K
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 347 RVS------PRIEH-----YGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLA 392
VS ++H + ++D Y ++G E A+ + + M ++P V + L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 393 ACRTKGDIILAERLMKYLVD---LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447
AC GD+ + + K LVD LD V L++ MY+ + D A I + ++ +
Sbjct: 241 ACADLGDLERGKFVHK-LVDQLKLDSDVSVMNSLIS-MYSKCKRVDIAADIFKNLRNK 296
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 259/461 (56%), Gaps = 36/461 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + IS + +G EA F M P+ T +T++S A S + LG
Sbjct: 157 VKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASAR--SGSIELG 214
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + G N +V NA+ID Y +
Sbjct: 215 RQVHSWIADHGFGSNLKIV--------------------------------NALIDFYSK 242
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++E+A +F + +D ISW L+ G+ ++EAL F+EM SG P+ VT++S+
Sbjct: 243 CGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSI 302
Query: 222 LNACANVGTLGIGLWIHRYVLK--QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L+ACA++G + IG WIH Y+ K + + + +LID+YS+CG IE A QVF M +
Sbjct: 303 LHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHK 362
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+L +WN++I GFA++G A + F+ M+K KPD ++F G L+ACSHAG+++ G F
Sbjct: 363 SLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIF 422
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M Y+++P++EHYGC++DL +G ++A ++ M M+P+ V+ SLL AC+ G+
Sbjct: 423 RSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGN 482
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E+ + L ++P +YVLL+N+YA G+W+ +IR + +G++K PG SSIE
Sbjct: 483 VELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIE 542
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I S +HEF+ GD+ H + IY MLE + L+ G+VP+T
Sbjct: 543 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDT 583
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 207/403 (51%), Gaps = 14/403 (3%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + H S A + M G PN TF LL CA + G IHG
Sbjct: 31 WNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKE--GLQIHGH 88
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG + + + V T+L+ MY + R++ A VFD + ++ A++ GY RG IES
Sbjct: 89 VLKLGYELD-LYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIES 147
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A MFDE+PV+D +SW A+++G+V+ G ++EALE F+EM + V PD T+++V++A A
Sbjct: 148 ARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASAR 207
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G++ +G +H ++ F N+K+ N LID YS+CG +E A +F + + ++SWN +
Sbjct: 208 SGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNIL 267
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KKI 345
I G+ EAL F M + G P+ V+ L AC+H G I+ G R+ + K++
Sbjct: 268 IGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIG-RWIHVYIDKRL 326
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSLLAACRTKGDII 401
V+ ++D+YS+ G +E A V +M K N ++ G + R
Sbjct: 327 KGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHG-RANAAFD 385
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
+ R+ K + D D +V L + + G D I R+M
Sbjct: 386 IFSRMRKNEIKPD---DITFVGLLSACSHAGMLDLGRHIFRSM 425
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 152/376 (40%), Gaps = 49/376 (13%)
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP----VRDAISWTAL 186
F + A VF+ ++ + WN M G+ D SA++++ M + ++ ++ L
Sbjct: 10 FEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFL 69
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
L K +E L+ + G E D S+++ L H+ +
Sbjct: 70 LKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDA---HKVFDRSSH 126
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
+D V L+ Y+ G IE AR +F + + +VSWN++I G+ G EALE F
Sbjct: 127 RDVVSY-TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKE 185
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M K +PD + ++A + +G IE G + + + ++ ++D YS+ G
Sbjct: 186 MMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIAD-HGFGSNLKIVNALIDFYSKCG 244
Query: 367 RLEDALNVVENMPMK----------------------------------PNEVVLGSLLA 392
+E A + + K PN+V + S+L
Sbjct: 245 EMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILH 304
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
AC G I + + Y+ GV + L L +MY+ G + A ++ +M + +
Sbjct: 305 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSL 364
Query: 450 QKKPGLSSIEIGSGIH 465
P +++ G +H
Sbjct: 365 ---PAWNAMIFGFAMH 377
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+ +A VF+ + + L+ WN++ G A++ AL+ + M G P+ +F L +
Sbjct: 13 LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72
Query: 326 CSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNE 384
C+ ++GL+ + ++K Y + + + ++ +Y + RLEDA V + + +
Sbjct: 73 CAKLKASKEGLQIHGHVLKLGYELDLYV--HTSLISMYVQNERLEDAHKVFDRSSHR-DV 129
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD-SNYVLLANMYAAVGKWDGAGKIRRT 443
V +L+ ++G I A + D P D ++ + + Y G + A ++ +
Sbjct: 130 VSYTALVTGYASRGYIESARNMF----DEIPVKDVVSWNAMISGYVETGNYKEALELFKE 185
Query: 444 MKGRGIQKKPGL-----------SSIEIGSGIHEFMA 469
M ++ SIE+G +H ++A
Sbjct: 186 MMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIA 222
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/459 (36%), Positives = 261/459 (56%), Gaps = 35/459 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFL 100
V V W++ I + S + EA F +M L +P +T ++L CA L
Sbjct: 273 VRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTD--LSR 330
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +H + KLG ++++G LL MYAK G +D
Sbjct: 331 GRKLHCYIIKLG-SVLDILLGNTLLSMYAKCGVID------------------------- 364
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
A+R FDEM +D++S++A+++G V+ G AL FR MQ+SG++PD T++
Sbjct: 365 ------DAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLG 418
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VL AC+++ L G H Y++ + F + +CN LID+YS+CG I FAR+VF RM +
Sbjct: 419 VLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHD 478
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+VSWN++I+G+ ++G EAL F+ + G KPD ++F L++CSH+GL+ +G +FD
Sbjct: 479 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 538
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + + + PR+EH C+VD+ RAG +++A + + NMP +P+ + +LL+ACR +I
Sbjct: 539 AMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNI 598
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E + K + L P N+VLL+N+Y+A G+WD A IR T K G++K PG S IEI
Sbjct: 599 ELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEI 658
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+H F+ GD+SH++ I LE L ++K GY E
Sbjct: 659 NGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAE 697
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 158/336 (47%), Gaps = 38/336 (11%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I+ G +A +M G PN T + +L + ++ L G +
Sbjct: 175 VVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGE--AKALGHGKAL 232
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + D N V+VGT LLDMYAK + A
Sbjct: 233 HGYCVRRSFD-NGVVVGTGLLDMYAKCQCLLYAR-------------------------- 265
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLN 223
++FD M VR+ +SW+A++ G+V +EALE F +M + ++P VT+ SVL
Sbjct: 266 -----KIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLR 320
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA + L G +H Y++K ++ + NTL+ +Y++CG I+ A + F M+ + VS
Sbjct: 321 ACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVS 380
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL-RYFDIM 342
+++I+ G NG AL F MQ G PD + G L ACSH ++ G + ++
Sbjct: 381 FSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLI 440
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+ + I ++D+YS+ G++ A V M
Sbjct: 441 VRGFATDTLI--CNALIDMYSKCGKISFAREVFNRM 474
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 191/427 (44%), Gaps = 50/427 (11%)
Query: 2 NSSATATILPQPFLPHQQNPNQNLT--------TTPQISIQTNNSKSTVNPTV-QWTSSI 52
S A + Q FL + N + ++ + Q+ + NP+V W I
Sbjct: 22 KSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQII 81
Query: 53 SRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKL 111
+ +G + A++ LH G PN T+ +L C+ + + G IH
Sbjct: 82 RAYAWNGPF-DGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLA--IEDGVEIHSHAKMF 138
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
GL+ ++V V TAL+D YA + G + A R+
Sbjct: 139 GLE-SDVFVCTALVDFYA-------------------------------KCGILVEAQRL 166
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTL 231
F M RD ++W A++ G G ++A++ +MQ G+ P+ TI+ VL L
Sbjct: 167 FSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKAL 226
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
G G +H Y +++ F + V V L+D+Y++C C+ +AR++F M R VSW+++I G+
Sbjct: 227 GHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGY 286
Query: 292 AVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
+ + EALE F+ M K+ P V+ L AC+ + G + + K+ V
Sbjct: 287 VASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLD 346
Query: 351 RIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL--MK 408
I ++ +Y++ G ++DA+ + M K + V ++++ C G+ +A + M
Sbjct: 347 -ILLGNTLLSMYAKCGVIDDAIRFFDEMNPK-DSVSFSAIVSGCVQNGNAAVALSIFRMM 404
Query: 409 YLVDLDP 415
L +DP
Sbjct: 405 QLSGIDP 411
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 148/352 (42%), Gaps = 72/352 (20%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
L +Y ++ LA +FD + S WN +I Y +W
Sbjct: 49 LTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAY----------------------AW 86
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
G F+ A++ + M GV P+ T VL AC+ + + G+ IH +
Sbjct: 87 N---------GPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKM 137
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
+ +V VC L+D Y++CG + A+++F M R +V+WN++I G ++ G +A++
Sbjct: 138 FGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQL 197
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDG--------LRYFD--------------- 340
MQ+EG P+ + G L A + G R FD
Sbjct: 198 IMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAK 257
Query: 341 -----IMKKIYRV-SPRIE-HYGCIVDLYSRAGRLEDALNVVENMPMK----PNEVVLGS 389
+KI+ V R E + ++ Y + +++AL + + M +K P V LGS
Sbjct: 258 CQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGS 317
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN----MYAAVGKWDGA 437
+L AC D+ +L Y++ L +D +LL N MYA G D A
Sbjct: 318 VLRACAKLTDLSRGRKLHCYIIKLGSVLD---ILLGNTLLSMYAKCGVIDDA 366
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 136/293 (46%), Gaps = 11/293 (3%)
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+ +L AC +L IH++ LK + V + L LY C + AR++F +
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+++ WN II +A NG A++ ++SM G +P+ ++ L ACS IEDG+
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
K++ + + +VD Y++ G L +A + +M + + V +++A C G
Sbjct: 132 HS-HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLYG 189
Query: 399 DIILAERLMKYLVDL-DPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
L + ++ ++ + + G+ N + + VG+ G + + G +++ +
Sbjct: 190 ---LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGH-GKALHGYCVRRSFD-NG 244
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLEL---LSFDLKLCGYVPETVAGELYE 507
+ +G+G+ + A + + + I+ ++ + +S+ + GYV E E
Sbjct: 245 VVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALE 297
>gi|414885893|tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea mays]
Length = 584
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/436 (38%), Positives = 248/436 (56%), Gaps = 5/436 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F + G +P+ + + CA + A +H K GL ++ V L+
Sbjct: 63 FDHLLRSGADPDPAAYELAFASCARARDR--ATAAQLHAHAAKRGLVASHRRVRCRLVHA 120
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR-MFDEMPVRDAISWTAL 186
YA G + A VFD WN ++ GY + G E +R F MP RD++SW +
Sbjct: 121 YAVCGMLPHARRVFDGGTDNDMVAWNCLLRGYAQEGGDEDLLRDFFARMPSRDSVSWNTV 180
Query: 187 LNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
L+ V G ++EA+ FREM S +PD VT++SV++A A +G L GLW H YV ++
Sbjct: 181 LSWCVVNGEYDEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAHGLWAHAYVFRKC 240
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSWNSIIVGFAVNGFVGEALEYF 304
+ K+ + LI++YS+CG IE A VF + KR+L +WN+++ GF NG+ ALE F
Sbjct: 241 IEVEEKLSSALINMYSKCGFIEGAVYVFDNVGGKRSLDTWNAMLAGFTANGYSERALELF 300
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
M+ P+ ++F L ACSH GL+E+G++YF M + Y + P I HYGC+VDL+ R
Sbjct: 301 TRMESTRLMPNKITFNTVLNACSHGGLVEEGMKYFQRMSRFYGIEPDIAHYGCMVDLFCR 360
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLL 424
AG E A +++ MPM+P+ +L +LL ACRT ++ L +++ L++ + YVLL
Sbjct: 361 AGMFEKAEEIIQTMPMEPDASMLKALLGACRTHKNLELGKKVGHRLIEAAANDHAGYVLL 420
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
+N+YA G W G K+R+ M RG+ K PG SS+E+ IHEF++GD+SH IY ML
Sbjct: 421 SNIYALDGNWGGVHKVRKLMLDRGVLKTPGSSSVELNGVIHEFISGDKSHSRKRDIYKML 480
Query: 485 ELLSFDLKLCGYVPET 500
+ LK GY P+T
Sbjct: 481 GEICQQLKSSGYTPDT 496
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/456 (37%), Positives = 255/456 (55%), Gaps = 36/456 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEF-TRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W ++ + G +AALEF RM G +PN T L+ C + L LG I
Sbjct: 465 ITWNGLVTGFTQYGD-GKAALEFFQRMHSMGMDPNTTTISGALAACGQVRN--LKLGKEI 521
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG V + ++ + VG+AL+ MY+ +++A VF
Sbjct: 522 HGYVLRNHIELS-TGVGSALISMYSGCDSLEVACSVFS---------------------- 558
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
E+ RD + W ++++ + G AL+ REM +S VE + VT++S L A
Sbjct: 559 ---------ELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPA 609
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+ + L G IH+++++ + N+LID+Y RCG I+ +R++F M +R LVSW
Sbjct: 610 CSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSW 669
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N +I + ++GF +A+ F + G KP+ ++FT L+ACSH+GLIE+G +YF +MK
Sbjct: 670 NVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKT 729
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P +E Y C+VDL SRAG+ + L +E MP +PN V GSLL ACR + LAE
Sbjct: 730 EYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAE 789
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+YL +L+P NYVL+AN+Y+A G+W+ A KIR MK RG+ K PG S IE+ +
Sbjct: 790 YAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKL 849
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
H F+ GD SH E I + +E L FD+K GYVP+T
Sbjct: 850 HSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDT 885
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 203/437 (46%), Gaps = 57/437 (13%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I+ ++G EA F +M L G PN IT + +S C + L G IH
Sbjct: 328 VSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNL--SLLRHGREIH 385
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G K+ ++++VG +L+D YAK +++A F ++ +WNAM+ GY RG
Sbjct: 386 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSH 445
Query: 166 ESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
E A+ + EM + D I+W L+ GF + G + ALE F+ M G++P+ TI
Sbjct: 446 EEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGA 505
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L AC V L +G IH YVL+ + + V + LI +YS C +E A VF + R +
Sbjct: 506 LAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDV 565
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-------------- 327
V WNSII A +G AL+ M + + V+ AL ACS
Sbjct: 566 VVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQF 625
Query: 328 ---------------------HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
G I+ R FD+M + VS + ++ +Y G
Sbjct: 626 IIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVS-----WNVMISVYGMHG 680
Query: 367 RLEDALNVVEN---MPMKPNEVVLGSLLAACRTKGDIILAE-----RLMKYLVDLDPGVD 418
DA+N+ + M +KPN + +LL+AC G ++ E ++MK +DP V+
Sbjct: 681 FGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSG--LIEEGWKYFKMMKTEYAMDPAVE 738
Query: 419 SNYVLLANMYAAVGKWD 435
Y + ++ + G+++
Sbjct: 739 -QYACMVDLLSRAGQFN 754
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 204/447 (45%), Gaps = 84/447 (18%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WT+ + +C G E F M G P+H F + C++ + +G ++
Sbjct: 158 WTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKN--YRVGKDVYDY 215
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ +G + N+ + G+ +LDM+ K GRMD+A F+ + K F WN M+ GY +G+ +
Sbjct: 216 MLSIGFEGNSCVKGS-ILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274
Query: 168 AVRMFDEMPVR----DAISWTALLNGFVKRGYFEEA------------------------ 199
A++ +M + D ++W A+++G+ + G FEEA
Sbjct: 275 ALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALI 334
Query: 200 ------------LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK-QDF 246
L FR+M + GV+P+ +TI S ++AC N+ L G IH Y +K ++
Sbjct: 335 AGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEEL 394
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
++ V N+L+D Y++C +E AR+ F + + LVSWN+++ G+A+ G EA+E +
Sbjct: 395 DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSE 454
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M+ +G +PD +++ G +T + G + L +F M
Sbjct: 455 MKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM------------------------ 490
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL----VDLDPGVDSNYV 422
+M M PN + LAAC ++ L + + Y+ ++L GV S
Sbjct: 491 ---------HSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGS--- 538
Query: 423 LLANMYAAVGKWDGAGKIRRTMKGRGI 449
L +MY+ + A + + R +
Sbjct: 539 ALISMYSGCDSLEVACSVFSELSTRDV 565
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 181/395 (45%), Gaps = 45/395 (11%)
Query: 8 TILPQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQ---WTSSISRHCRSGRIAEA 64
I P+ P Q P +N + ++ N + N + ++ S H R+G + A
Sbjct: 15 AIQPKGTSPLQTLPTRNCCIVASTNTKSQNLRKLTNARQRITGFSGGGSVH-RNGVLNNA 73
Query: 65 ALEFTRMTLHGTNPNHIT--FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
A+ + M L TNP+ + ++L C + L LG +H + G+D + G+
Sbjct: 74 AMLLSSMDL--TNPDECIEIYASILQKCRKLYN--LRLGFQVHAQLVVNGVDVCEFL-GS 128
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
LL++Y + G +E A RMFD+M R+ S
Sbjct: 129 RLLEVYCQ-------------------------------TGCVEDARRMFDKMSERNVFS 157
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
WTA++ + G +EE ++ F M GV PD+ V AC+ + +G ++ Y+L
Sbjct: 158 WTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYML 217
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
F+ N V +++D++ +CG ++ AR+ F+ + + + WN ++ G+ G +AL+
Sbjct: 218 SIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALK 277
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
+ M+ G KPD V++ ++ + +G E+ +YF M + P + + ++
Sbjct: 278 CISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGS 337
Query: 363 SRAGRLEDALNVVENMPM---KPNEVVLGSLLAAC 394
+ G +AL+V M + KPN + + S ++AC
Sbjct: 338 EQNGYDFEALSVFRKMVLEGVKPNSITIASAVSAC 372
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 143/343 (41%), Gaps = 81/343 (23%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
S+ + V W S IS +SGR A M L N +T ++ L C+ +
Sbjct: 558 SELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA-- 615
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L G IH + + GLD N ++ +L+DMY + G + + +FD M + +WN MI
Sbjct: 616 LRQGKEIHQFIIRCGLDTCNFIL-NSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMIS 674
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
Y G AV +F + FR M G++P+++T
Sbjct: 675 VYGMHGFGMDAVNLFQQ----------------------------FRTM---GLKPNHIT 703
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDN--VKVCNTLIDLYSRCGCIEFARQVFQR 275
++L+AC++ G + G W + ++K ++ + V+ ++DL SR G +F
Sbjct: 704 FTNLLSACSHSGLIEEG-WKYFKMMKTEYAMDPAVEQYACMVDLLSRAG--QF------- 753
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC---SHAGLI 332
E LE+ ++K F+P+ + L AC + L
Sbjct: 754 ----------------------NETLEF---IEKMPFEPNAAVWGSLLGACRIHCNPDLA 788
Query: 333 EDGLRYFDIMKKIYRVSPRIE-HYGCIVDLYSRAGRLEDALNV 374
E RY ++ + P+ +Y + ++YS AGR EDA +
Sbjct: 789 EYAARY------LFELEPQSSGNYVLMANIYSAAGRWEDAAKI 825
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 271/467 (58%), Gaps = 5/467 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV WT I + G +E+ F +M + T++SGC++ CL +
Sbjct: 360 TVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCL--ARQL 417
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H L K G R V++ +L+ MYAK G + A +F +M + +W M+ Y + G+
Sbjct: 418 HSLSLKSGHTRA-VVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGN 476
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLN 223
I A FD M R+ I+W A+L +++ G E+ L+ + M V PD+VT +++
Sbjct: 477 IGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFR 536
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
CA++G +G I + +K + V N +I +YS+CG I AR++F + ++ LVS
Sbjct: 537 GCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVS 596
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN++I G++ +G +A+E F+ M K+G KPD +S+ L++CSH+GL+++G YFD++K
Sbjct: 597 WNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLK 656
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ + VSP +EH+ C+VDL +RAG L +A N+++ MPMKP V G+LL+AC+T G+ LA
Sbjct: 657 RDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELA 716
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E K+L DLD Y+LLA +YA GK + ++R+ M+ +GI+K PG S +E+ +
Sbjct: 717 ELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNK 776
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV-PETVAGELYEND 509
+H F A D SH + I L+ L + GYV E++ E++ ++
Sbjct: 777 VHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYVRTESLRSEIHHSE 823
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 167/338 (49%), Gaps = 17/338 (5%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPSQCLFLGAMIHG 106
W + +S + +SGR +A F M G + PN TF + C + L + G
Sbjct: 129 WNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLL--G 186
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
L+ K G + + V T ++DM+ + G +D A+ F + + F N+M+ GY + ++
Sbjct: 187 LLTKFGF-QGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVD 245
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A+ +F+ MP RD +SW +++ + G EAL +M GV D T S L ACA
Sbjct: 246 HALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACA 305
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ +LG G +H V++ + V + +++LY++CGC + AR+VF + R VSW
Sbjct: 306 KLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTV 365
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I GF G E+LE FN M+ E D + ++ CS+ + ++++
Sbjct: 366 LIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNR-------MDMCLARQLH 418
Query: 347 RVSPRIEHYGCIV------DLYSRAGRLEDALNVVENM 378
+S + H +V +Y++ G L++A ++ +M
Sbjct: 419 SLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSM 456
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 137/305 (44%), Gaps = 38/305 (12%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W +S +SGR EA M G + T+ + L+ CA S L G +H
Sbjct: 260 VSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSS--LGWGKQLH 317
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + L + V +A++++YAK G
Sbjct: 318 AQVIR-SLPCIDPYVASAMVELYAKCGC-------------------------------F 345
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A R+F + R+ +SWT L+ GF++ G F E+LE F +M+ + D + ++++ C
Sbjct: 346 KEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGC 405
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+N + + +H LK V + N+LI +Y++CG ++ A +F M +R +VSW
Sbjct: 406 SNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWT 465
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++ ++ G +G+A E+F+ M +++ L A G EDGL+ + M
Sbjct: 466 GMLTAYSQVGNIGKAREFFDGMSTRNV----ITWNAMLGAYIQHGAEEDGLKMYSAMLTE 521
Query: 346 YRVSP 350
V P
Sbjct: 522 KDVIP 526
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 179/423 (42%), Gaps = 78/423 (18%)
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRM-DLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
HG + +GL + V + LL Y G + D ++ + + T N M++GY + G
Sbjct: 51 HGRLVSVGL-ASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLG 109
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE-PDYVTIISVL 222
+ A +F MP RD SW L++G+ + G F +A+E F M+ SG P+ T +
Sbjct: 110 SLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAM 169
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR------------ 270
+C +G + L + + K F+ + V ++D++ RCG ++FA
Sbjct: 170 KSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVF 229
Query: 271 -------------------QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
++F+ M +R +VSWN ++ + +G EAL M G
Sbjct: 230 CRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRG 289
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLE 369
+ D ++T +LTAC+ + G + + ++ R P I+ Y +V+LY++ G +
Sbjct: 290 VRLDSTTYTSSLTACAKLSSLGWGKQ---LHAQVIRSLPCIDPYVASAMVELYAKCGCFK 346
Query: 370 DALNVVENMP----------------------------------MKPNEVVLGSLLAACR 395
+A V ++ M ++ L ++++ C
Sbjct: 347 EARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCS 406
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
+ D+ LA +L + + L G V+ L +MYA G A I +M+ R I
Sbjct: 407 NRMDMCLARQL--HSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSW 464
Query: 453 PGL 455
G+
Sbjct: 465 TGM 467
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 267/456 (58%), Gaps = 35/456 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WTS IS + ++ EA L + +M G +P+ +T TL+S CA+ L +G +H
Sbjct: 146 VVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKD--LGVGMKLH 203
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ ++ + V+ G+AL++MYAK G D+
Sbjct: 204 SHIREMDMKICAVL-GSALVNMYAKCG-------------------------------DL 231
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLNA 224
++A ++FD++ +D +W+AL+ G+VK EAL+ FRE+ S + P+ VTI++V++A
Sbjct: 232 KTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISA 291
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA +G L G W+H Y+ + +V + N+LID++S+CG I+ A+++F M + L+SW
Sbjct: 292 CAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISW 351
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
NS++ G A++G EAL F+ MQ +PD ++F G LTACSHAGL+++G + F ++
Sbjct: 352 NSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEA 411
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y V + EHYGC+VDL RAG L +A + MP++P+ + GS+L ACR ++ L E
Sbjct: 412 LYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGE 471
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ L++L+P D Y+LL+N+YA W+ K+R M +GIQK PG SS+ I +
Sbjct: 472 EAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIA 531
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
H F+AGD SH E I ML + LKL GYV +T
Sbjct: 532 HSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADT 567
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 172/346 (49%), Gaps = 37/346 (10%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPSQ 96
+ + V + W S + S A +T M N P+ TF +LL GCA
Sbjct: 36 AHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLE- 94
Query: 97 CLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMI 156
+G ++HG V K L +++ + T LL+MYA G
Sbjct: 95 -FKVGKVLHGQVVKYML-HSDLYIETTLLNMYAACG------------------------ 128
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
D++SA +F+ M R+ + WT++++G++K EAL +++M+ G PD V
Sbjct: 129 -------DLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEV 181
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T+ ++++ACA + LG+G+ +H ++ + D K + + L+++Y++CG ++ ARQVF ++
Sbjct: 182 TMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQL 241
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ-KEGFKPDGVSFTGALTACSHAGLIEDG 335
+ + +W+++I G+ N EAL+ F + +P+ V+ ++AC+ G +E G
Sbjct: 242 SDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETG 301
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
D + + + + ++D++S+ G ++ A + ++M K
Sbjct: 302 RWVHDYITRTQK-GHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK 346
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 146/316 (46%), Gaps = 42/316 (13%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNACA 226
A +F V D ++W ++L FV AL+ + EM + S PD T S+L CA
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ +G +H V+K ++ + TL+++Y+ CG ++ AR +F+RM R V W S
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI- 345
+I G+ N EAL + M+++GF PD V+ ++AC+ + G++ ++++
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP-------------------------- 379
++ + +V++Y++ G L+ A V + +
Sbjct: 211 MKICAVLG--SALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQL 268
Query: 380 ---------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPG--VDSNYVLLANMY 428
M+PNEV + ++++AC GD+ + Y+ G V N L+ +M+
Sbjct: 269 FREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLI-DMF 327
Query: 429 AAVGKWDGAGKIRRTM 444
+ G D A +I +M
Sbjct: 328 SKCGDIDAAKRIFDSM 343
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/464 (36%), Positives = 258/464 (55%), Gaps = 8/464 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ + ++G + EA + F M G P+ +T +++S CA + G +H
Sbjct: 959 VSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAAD--REGRQVH 1016
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V K R ++++ AL+DMYAK GR A VFD M +S + ++I GY R ++
Sbjct: 1017 ARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANV 1076
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A +F +M ++ I+W L+ + + G EEAL F ++ V P + T +VLNAC
Sbjct: 1077 EDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNAC 1136
Query: 226 ANVGTLGIGLWIHRYVLKQDFK------DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
NV L +G H +VLK+ F+ +V V N+L+D+Y + G I+ +VF+RM R
Sbjct: 1137 GNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR 1196
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
VSWN++IVG A NG +AL F M PD V+ G L+AC H+GL+E+G RYF
Sbjct: 1197 DNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYF 1256
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M + + + P +HY C++DL RAG L++ +++ M M+P+ V+ SLL +CR +
Sbjct: 1257 RSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKN 1316
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ + E L +LDP YVLL+NMYA +GKW ++R +MK RG+ K+PG S IE
Sbjct: 1317 VEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWIE 1376
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAG 503
IG + F+A D H I+++L ++ + E G
Sbjct: 1377 IGRKVSVFLARDNGHPCKNEIHAILRIIQMQMSRVSVDSENADG 1420
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 192/410 (46%), Gaps = 39/410 (9%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + ++ + RS + A L F +M + IT ++LS C + G +H
Sbjct: 350 VSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILD--IGKGEEVH 407
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
K G S NA++ Y + G +
Sbjct: 408 AFAIKCGF--------------------------------FSSPILKNALVRMYSKCGCL 435
Query: 166 ESAVRM--FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
SA R+ F+ RD+ SW +L++G+ + E AL +MQ S V P+ T S L
Sbjct: 436 RSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQ-SEVTPNQSTFSSALA 494
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACAN+ L G+ IH Y++++ ++ + + + LID+Y +C +++ ++F+ R ++
Sbjct: 495 ACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVIL 554
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WNS+I G A +G L+ F+ MQK+G K D V+F GAL +C G + G YF +M
Sbjct: 555 WNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMM 614
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ PRIEHY C+++L + G + + + VE+MP +P + + CR G+ L
Sbjct: 615 D-ESIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLG 673
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKP 453
ER K + D +P +V + + G + A + +G G ++ P
Sbjct: 674 ERAAKCINDSNPLTPVQFVATVDYESNDGGRE-AESTSFSSEGEGCEELP 722
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 179/357 (50%), Gaps = 10/357 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W + R+ +G A F RM G P T + C D + L G I
Sbjct: 217 AISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRD--NNALEEGRCI 274
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V + G + ++V V ++++DMYAK G MD A +F+ +K +++ G G
Sbjct: 275 HAFVLRHGYE-HHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGR 333
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I A R+F+ M R+ +SW A+L G+++ AL F++M+ E D +T+ SVL+A
Sbjct: 334 IADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSA 393
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ--VFQRMHKRTLV 282
C + +G G +H + +K F + + N L+ +YS+CGC+ A + +F+ +R
Sbjct: 394 CTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSY 453
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWNS+I G+ + AL MQ E P+ +F+ AL AC++ L++ G++ M
Sbjct: 454 SWNSLISGYERHSMSEAALYALTKMQSE-VTPNQSTFSSALAACANIFLLKQGMQIHAYM 512
Query: 343 -KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
+K Y + + ++D+Y + + + ++ + E P + + ++ S++ C G
Sbjct: 513 IRKGYEIDDILR--SVLIDMYCKCRQFDYSIRIFEARPSR-DVILWNSMIFGCAYSG 566
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 129/258 (50%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
L+ YA+ GR+ A VFD + ++F++NA++ + R G A +F +P D S+
Sbjct: 801 LVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPDPDQCSY 860
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
A++ + +AL M + + S L+ACA G+ +H V K
Sbjct: 861 NAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSK 920
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
+V + + L+D+Y++C E AR+VF+ M +R +VSWNS+I + NG VGEAL
Sbjct: 921 SPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVL 980
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F SM K GF PD V+ ++AC+ +G + + K R + +VD+Y+
Sbjct: 981 FVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYA 1040
Query: 364 RAGRLEDALNVVENMPMK 381
+ GR A V + M +
Sbjct: 1041 KCGRTRAARCVFDRMASR 1058
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 165/371 (44%), Gaps = 74/371 (19%)
Query: 50 SSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVC 109
+++++H R A+A L M N +F + LS CA + G +H LV
Sbjct: 865 AALAQHSRG---ADALLFLAAMHADDFVLNAYSFASALSACA--AEKDSRTGVQVHALVS 919
Query: 110 KLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAV 169
K +V +G+ALLDMYAK + A VF+AM ++ +WN++I Y + G +
Sbjct: 920 K-SPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPV---- 974
Query: 170 RMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVG 229
EAL F M +G PD VT+ SV++ACA +
Sbjct: 975 ---------------------------GEALVLFVSMMKAGFVPDEVTLASVMSACAGLA 1007
Query: 230 TLGIGLWIHRYVLKQD-FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS----- 283
G +H V+K D F++++ + N L+D+Y++CG AR VF RM R++VS
Sbjct: 1008 ADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLI 1067
Query: 284 --------------------------WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
WN +I +A NG EAL F +++E P
Sbjct: 1068 TGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHY 1127
Query: 318 SFTGALTACSHAGLIEDGLR-YFDIMKKIYRVS--PRIEHY--GCIVDLYSRAGRLEDAL 372
++ L AC + ++ G + + ++K+ +R P + + +VD+Y + G ++D
Sbjct: 1128 TYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGA 1187
Query: 373 NVVENMPMKPN 383
V E M + N
Sbjct: 1188 KVFERMAARDN 1198
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 129/260 (49%), Gaps = 2/260 (0%)
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
+F +N I+ G + A +FD MP+RD SW A++ + G+ EAL F M
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNS 144
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
G+ P T+ SVL+ CA L +H ++ K+DF+ NV + L+D+Y C +
Sbjct: 145 LGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLAD 204
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
AR+ F + + +SWN I+ + + G A++ F M G +P G + + A+ AC
Sbjct: 205 ARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRD 264
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
+E+G R + + +VD+Y++ G ++ A ++ PMK + V+
Sbjct: 265 NNALEEG-RCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMK-DMVMST 322
Query: 389 SLLAACRTKGDIILAERLMK 408
S+++ + G I A+R+ +
Sbjct: 323 SIVSGLASCGRIADAKRVFE 342
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 201/472 (42%), Gaps = 108/472 (22%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA-MIHG 106
W + I+ R+G +EA F+ M G P T ++LS CA+ C GA +HG
Sbjct: 119 WNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAECLDLC---GARQLHG 175
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
+ K ++NV++GTAL+D+Y N + +
Sbjct: 176 HIAKRDF-QSNVILGTALVDVYG-----------------------NCFL--------LA 203
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A R FD++ +AISW ++ + G + A++ F M +GV P T+ + AC
Sbjct: 204 DARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACR 263
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF------------------ 268
+ L G IH +VL+ ++ +V V ++++D+Y++CG ++
Sbjct: 264 DNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTS 323
Query: 269 -------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
A++VF+ M +R LVSWN+++ G+ + + AL F M++E + D
Sbjct: 324 IVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFD 383
Query: 316 GVSFTGALTACS-----------HAGLIEDGLRYFDIMK----KIY------RVSPRI-- 352
++ L+AC+ HA I+ G I+K ++Y R + R+
Sbjct: 384 AITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLL 443
Query: 353 ---------EHYGCIVDLYSRAGRLEDALNVVENM--PMKPNEVVLGSLLAACRTKGDII 401
+ ++ Y R E AL + M + PN+ S LAAC +I
Sbjct: 444 FEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSEVTPNQSTFSSALAAC---ANIF 500
Query: 402 LAERLMK---YLVDLDPGVDSNY-VLLANMYAAVGKWDGAGKIRRTMKGRGI 449
L ++ M+ Y++ +D +L +MY ++D + +I R +
Sbjct: 501 LLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDV 552
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 41/223 (18%)
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTL------------------- 281
LK F + NTL+ Y+R G + AR+VF + H T
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846
Query: 282 -----------VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
S+N++I A + +AL + +M + F + SF AL+AC+
Sbjct: 847 ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHY---GCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
G++ ++ K SP + ++D+Y++ E+A V E MP + N V
Sbjct: 907 DSRTGVQVHALVSK----SPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPER-NIVSW 961
Query: 388 GSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
SL+ G + E L+ ++ + G + V LA++ +A
Sbjct: 962 NSLITCYEQNGPV--GEALVLFVSMMKAGFVPDEVTLASVMSA 1002
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 163/434 (37%), Positives = 262/434 (60%), Gaps = 8/434 (1%)
Query: 59 GRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNV 118
G A F+ + +G +P+ T +L A + + LG IH KLG N
Sbjct: 84 GEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTN--IHLGESIHACTIKLG-SAVNE 140
Query: 119 MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR 178
VG +LL MY F M A VFD M S+ +W MI GY GD+++A +FD V+
Sbjct: 141 FVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMATVK 200
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIH 238
D W A+++G+V+ F+E L FR MQ++ VEPD I+++L+ACA++G L G+WIH
Sbjct: 201 DTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGIWIH 260
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
RY+ + ++V LID+Y++CG ++ A+ +F M +R V WN++I G A++G
Sbjct: 261 RYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDGDGE 320
Query: 299 EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCI 358
A++ F M+K G KPD ++F L ACS++G++++G+R ++ M ++++ P+ EHYGC+
Sbjct: 321 GAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGCV 380
Query: 359 VDLYSRAGRLEDALNVVENMP--MKPNE--VVLGSLLAACRTKGDIILAERLMKYLVDLD 414
+DL SR GR E+A V++ +P P+E V + L+AC G AE + L L+
Sbjct: 381 IDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAERLFQLE 440
Query: 415 PGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSH 474
+ YVLL+NMYAA+GK + A ++R MK +G++K PG SSI++ ++EF+AG+++H
Sbjct: 441 RHSGA-YVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEKTH 499
Query: 475 IESEHIYSMLELLS 488
++I+ +LE L+
Sbjct: 500 RHIDNIHLVLEELN 513
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 147/351 (41%), Gaps = 70/351 (19%)
Query: 40 STVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
+TV T W + IS + ++ E F M L P+ +T+LS CA + L
Sbjct: 197 ATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGA--LD 254
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
G IH + +LGL + V T L+DMYAK G +DLA +F+ M + + WNAMI G
Sbjct: 255 TGIWIHRYLGRLGLPL-TLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGM 313
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
GD E A+++ F EM+ +G++PD +T I
Sbjct: 314 AMDGDGEGAIKL-------------------------------FMEMEKAGIKPDNITFI 342
Query: 220 SVLNACANVGTL--GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+VL AC+N G + GI +W +R + + +IDL SR G E A V QR+
Sbjct: 343 AVLAACSNSGMVDEGIRIW-NRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLP 401
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
K S + V++ L+AC G +
Sbjct: 402 KTASPS------------------------------EEAVAWRAFLSACCKHGQTQQAEV 431
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
+ +++++ Y + ++Y+ G+ EDA V M +K E V G
Sbjct: 432 AAE---RLFQLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPG 479
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 115/275 (41%), Gaps = 43/275 (15%)
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R G + A ++F + + ++ + RG F A+ F + +G+ PD T+
Sbjct: 51 RNGSLSHAFKLFQHIQHPTICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPY 110
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VL A A + + +G IH +K N V N+L+ +Y + ARQVF M + +
Sbjct: 111 VLKASARMTNIHLGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELS 170
Query: 281 LVSWNSIIVGFA--------------------------VNGFV-----GEALEYFNSMQK 309
VSW +I G+A ++G+V E L F MQ
Sbjct: 171 AVSWTVMIYGYANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQL 230
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI-----YRVSPRIEHYGCIVDLYSR 364
+PD L+AC+H G ++ G+ + ++ RVS ++D+Y++
Sbjct: 231 TEVEPDEAIIVTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTG------LIDMYAK 284
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
G L+ A + M + N V ++++ GD
Sbjct: 285 CGHLDLAKYLFNEMSQRDN-VCWNAMISGMAMDGD 318
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/461 (37%), Positives = 264/461 (57%), Gaps = 30/461 (6%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I+ + + G EA F +M G+ PN +T I++LS CA LGA
Sbjct: 329 VTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACAS-------LGAF-- 379
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G++ + + LL + FG D +V+ NA+ID Y +
Sbjct: 380 ----SQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY-----------NALIDMYSKCRSF 424
Query: 166 ESAVRMFDEMPV--RDAISWTALLNGFVKRGYFEEALECFREM--QISGVEPDYVTIISV 221
++A +FD++P+ R+ ++WT ++ G + G +AL+ F EM + GV P+ TI +
Sbjct: 425 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 484
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVK--VCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACA++ + IG IH YVL+ D+ V N LI++YS+CG ++ AR VF M ++
Sbjct: 485 LMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQK 544
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+ +SW S++ G+ ++G EAL+ F+ M+K GF PD ++F L ACSH G+++ GL YF
Sbjct: 545 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYF 604
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
D M Y ++PR EHY +DL +R GRL+ A V++MPM+P VV +LL+ACR +
Sbjct: 605 DSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSN 664
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ LAE + LV+++ D +Y L++N+YA G+W +IR MK GI+K+PG S ++
Sbjct: 665 VELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 724
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
G F GDRSH S IY++LE L +K GYVPET
Sbjct: 725 GQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPET 765
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 192/374 (51%), Gaps = 46/374 (12%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTL--HGTNPNH----ITFITLLSGCADFPS 95
++ + W S +S H +S A F++MTL H N I+ + +L C
Sbjct: 183 IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL-- 240
Query: 96 QCLFLGAMIHGLVCKLG--LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWN 153
+ + +HG + G LD V VG AL+D YAK G M+ A VF+ M K +WN
Sbjct: 241 KAVPQTKEVHGNAIRNGTFLD---VFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWN 297
Query: 154 AMIDGYMRRGDIESAVRMFDEM-----PVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
AM+ GY + G+ ++A +F M P+ D ++WTA++ G+ +RG EAL FR+M
Sbjct: 298 AMVAGYSQSGNFKAAFELFKNMRKENIPL-DMVTWTAVIAGYSQRGCSHEALNVFRQMIF 356
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK-------QDF---KDNVKVCNTLID 258
SG P+ VTIISVL+ACA++G G+ IH Y LK DF +++ V N LID
Sbjct: 357 SGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 416
Query: 259 LYSRCGCIEFARQVFQR--MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE--GFKP 314
+YS+C + AR +F + +R +V+W +I G A G +AL+ F M E G P
Sbjct: 417 MYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAP 476
Query: 315 DGVSFTGALTACSHAGLIEDG-------LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+ + + L AC+H I G LR+ Y V+ C++++YS+ G
Sbjct: 477 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVA------NCLINMYSKCGD 530
Query: 368 LEDALNVVENMPMK 381
++ A +V ++M K
Sbjct: 531 VDTARHVFDSMSQK 544
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 149/308 (48%), Gaps = 33/308 (10%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPS-QC 97
+ T +P V W I H + GR+ A RM GT +H T +L C + PS +C
Sbjct: 76 RVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRC 135
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR---VKSSFTWNA 154
G+ HGL+C G + +NV + AL+ MY++ G ++ A+++FD + + +WN+
Sbjct: 136 ---GSAFHGLICCNGFE-SNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNS 191
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
++ +++ + +A+ +F +M + + + D
Sbjct: 192 IVSAHVKSSNAWTALDLFSKMTL-------------------------IVHEKPTNERSD 226
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
++I+++L AC ++ + +H ++ +V V N LID Y++CG +E A +VF
Sbjct: 227 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 286
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
M + +VSWN+++ G++ +G A E F +M+KE D V++T + S G +
Sbjct: 287 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 346
Query: 335 GLRYFDIM 342
L F M
Sbjct: 347 ALNVFRQM 354
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 33/274 (12%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
++ Y+ G + A+ + + + A+ W L+ +K+G + A+ M +G D
Sbjct: 57 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLD 116
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+ T+ VL AC + + G H + F+ NV +CN L+ +YSRCG +E A +F
Sbjct: 117 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 176
Query: 275 RMHKRTL---VSWNSIIVGFAVNGFVGEALEYFNSM------QKEGFKPDGVSFTGALTA 325
+ +R + +SWNSI+ + AL+ F+ M + + D +S L A
Sbjct: 177 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 236
Query: 326 CS-----------HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
C H I +G + D+ ++D Y++ G +E+A+ V
Sbjct: 237 CGSLKAVPQTKEVHGNAIRNG-TFLDVFVG-----------NALIDAYAKCGLMENAVKV 284
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
M K + V +++A G+ A L K
Sbjct: 285 FNMMEFK-DVVSWNAMVAGYSQSGNFKAAFELFK 317
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/463 (37%), Positives = 260/463 (56%), Gaps = 37/463 (7%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ +F ++ A+F S L G +H K GLD +++ V T L+ MY + G + A
Sbjct: 271 PDSFSFAFVVKAAANFRS--LRTGFQMHCQALKHGLD-SHLFVATTLIGMYGECGCVGFA 327
Query: 138 TVVFDAMR-------------------------------VKSSFTWNAMIDGYMRRGDIE 166
VFD M V++ +WN M+ GY++ G++E
Sbjct: 328 RKVFDEMPQPNLVAWNAVVTACFRGNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELE 387
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A R+F EMP RD +SW+ ++ GF G F E+ FRE+ + + P+ V++ VL+AC+
Sbjct: 388 CAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACS 447
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSWN 285
G G +H +V K + V V N LID+YSRCG + AR VF+ M KR++VSW
Sbjct: 448 QSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWT 507
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S+I G A++G EA+ FN M + G PD +SF L ACSHAGLI++G YF MK++
Sbjct: 508 SMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRV 567
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P +EHYGC+VDLY R+G+L+ A + + MP+ P +V +LL AC + G+I LAE+
Sbjct: 568 YHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQ 627
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ + L +LDP + VLL+N+YA GKW IR++M + I+K S +E+G ++
Sbjct: 628 VKQRLNELDPNNSGDLVLLSNVYATAGKWKDVASIRKSMIVQRIKKITAWSLVEVGKTMY 687
Query: 466 EFMAGD-RSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYE 507
+F A + + I+ E + E++ GY PE VA LY+
Sbjct: 688 KFTACEKKKEIDIEAHEKLKEIILRLRDEAGYAPE-VASALYD 729
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 126/311 (40%), Gaps = 43/311 (13%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IHG K G+D ++ +G +L A + DA+ Y R
Sbjct: 191 IHGFFIKSGVDTDSYFIGKLIL---------HCAISISDAL-------------PYAR-- 226
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVL 222
R+ P DA + L+ G+ + ++ F EM G + PD + V+
Sbjct: 227 ------RLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVV 280
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
A AN +L G +H LK ++ V TLI +Y CGC+ FAR+VF M + LV
Sbjct: 281 KAAANFRSLRTGFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLV 340
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+WN+++ V A E F+ M V G + AG +E R F M
Sbjct: 341 AWNAVVTACFRGNDVSGAREIFDKMLVRNHTSWNVMLAGYI----KAGELECAKRIFSEM 396
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGD 399
VS + ++ +S G ++ + + M+PNEV L +L+AC G
Sbjct: 397 PHRDDVS-----WSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGA 451
Query: 400 IILAERLMKYL 410
+ L ++
Sbjct: 452 FEFGKTLHGFV 462
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 12/239 (5%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ I +G E+ F + PN ++ +LS C+ S G +H
Sbjct: 402 VSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQ--SGAFEFGKTLH 459
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF-TWNAMIDGYMRRGD 164
G V K G V V AL+DMY++ G + +A +VF+ M+ K S +W +MI G G
Sbjct: 460 GFVEKSGYSW-IVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGH 518
Query: 165 IESAVRMFDEMP----VRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTII 219
E A+R+F+EM + D IS+ +LL G +E F +M+ + +EP
Sbjct: 519 GEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYG 578
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+++ G L + ++ + V TL+ S G IE A QV QR+++
Sbjct: 579 CMVDLYGRSGKLQKA---YSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNE 634
>gi|224141427|ref|XP_002324074.1| predicted protein [Populus trichocarpa]
gi|222867076|gb|EEF04207.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/456 (36%), Positives = 272/456 (59%), Gaps = 7/456 (1%)
Query: 48 WTSSISRHCRSG-RIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
WT+ ++ + G + +E F M G + + I++ C L +G G
Sbjct: 89 WTTLLTSLVQHGTKPSEGFFFFKEMRKEGVVLDDVAMISVFVLCTRVED--LGMGRQAQG 146
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
+ K+GL V V A+++MY K G ++ VF M ++ +W+ +++G ++ +E
Sbjct: 147 CLVKMGLGLG-VKVCNAIMNMYVKCGLVEEVRRVFCEMNERNVVSWSTLLEGVVKWEGVE 205
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNAC 225
+ +FDEMP R+ + WT ++ G+V G+ E EM + + ++VT+ S+L+AC
Sbjct: 206 NGRVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLDEMVLRFRLGLNFVTLSSILSAC 265
Query: 226 ANVGTLGIGLWIHRYVLKQDFKD-NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
A G + +G W+H Y LK ++ ++ V L+D+Y++CG I+ A +VF+ + KR +V+W
Sbjct: 266 AQSGDVLMGRWVHVYALKGMGREMHIMVGTALVDMYAKCGPIDMAFKVFKYLPKRNVVAW 325
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+++ G A++G L+ F M +E KPD ++F L+ACSH+GL++ G YF ++
Sbjct: 326 NAMLGGLAMHGRGKFVLDIFPKMIEEA-KPDDLTFMAVLSACSHSGLVDQGYHYFRSLES 384
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y +P+IEHY C+VD+ RAG LE+A+ +++ MPM PNEVVLGSLL +C G + L E
Sbjct: 385 EYGTTPKIEHYACMVDILGRAGHLEEAVMLIKKMPMCPNEVVLGSLLGSCNAHGKLQLGE 444
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
R+++ L+ +D +VLL+NMY GK D A +R+ +K +GI+K PG+SSI +G I
Sbjct: 445 RILQELIQMDGHNTEYHVLLSNMYVLEGKQDKANSLRQILKSKGIRKVPGVSSIYVGGNI 504
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
H+F AGD+SH ++ IY L + L+L GYVP T
Sbjct: 505 HQFSAGDKSHPLTKEIYHALNNMIQRLRLAGYVPNT 540
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKD---NVKVCNTLIDLYSRCGCIEFARQVFQRM 276
S+L +CA +L G +H +L N + N L LY+ CG AR +F ++
Sbjct: 20 SLLRSCARNSSLSTGKKLHAVILTSGLASSSPNTFLLNALHHLYASCGVTSSARHLFYQI 79
Query: 277 HK--RTLVSWNSIIVGFAVNGFV-GEALEYFNSMQKEGFKPDGVSFTGALTACS 327
+ + + W +++ +G E +F M+KEG D V+ C+
Sbjct: 80 PRSHKDVTDWTTLLTSLVQHGTKPSEGFFFFKEMRKEGVVLDDVAMISVFVLCT 133
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/460 (35%), Positives = 271/460 (58%), Gaps = 37/460 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAM 103
+V W S I+ + ++G EA F M G P+ ++ ++LL C + L LG
Sbjct: 188 SVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGD--LELGRW 245
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+ G V + G+ N+ +G+AL+ MYAK G
Sbjct: 246 VEGFVVERGMTLNSY-IGSALISMYAKCG------------------------------- 273
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
++ESA R+FD M RD I+W A+++G+ + G +EA+ F M+ V + +T+ +VL+
Sbjct: 274 ELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLS 333
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA +G L +G I Y ++ F+ ++ V LID+Y++ G ++ A++VF+ M ++ S
Sbjct: 334 ACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEAS 393
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEG--FKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
WN++I A +G EAL F M EG +P+ ++F G L+AC HAGL+++G R FD+
Sbjct: 394 WNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDM 453
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M ++ + P+IEHY C+VDL +RAG L +A +++ MP KP++V LG+LL ACR+K ++
Sbjct: 454 MSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVD 513
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
+ ER+M+ ++++DP NY++ + +YA + W+ + ++R M+ +GI K PG S IE+
Sbjct: 514 IGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVE 573
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
+ +HEF AGD ++S + ++++LL +LK GYVP+ V
Sbjct: 574 NHLHEFHAGDGLCLDSIDLSNIIDLLYEELKREGYVPKVV 613
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 182/364 (50%), Gaps = 37/364 (10%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F RM P++ TF CA+ S L H L+ KL L +
Sbjct: 110 FHRMMSLSLTPDNFTFPFFFLSCANLAS--LSHACAAHSLLFKLALHSD----------- 156
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
T +++I Y R G + SA ++FDE+P RD++SW +++
Sbjct: 157 ---------------------PHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMI 195
Query: 188 NGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
G+ K G EA+E FREM + G EPD ++++S+L AC +G L +G W+ +V+++
Sbjct: 196 AGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGM 255
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
N + + LI +Y++CG +E AR++F M R +++WN++I G+A NG EA+ F+
Sbjct: 256 TLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHG 315
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M+++ + ++ T L+AC+ G ++ G + D I ++D+Y+++G
Sbjct: 316 MKEDCVTANKITLTAVLSACATIGALDLG-KQIDEYASQRGFQHDIFVATALIDMYAKSG 374
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN 426
L++A V ++MP K NE ++++A G A L +++ D G N +
Sbjct: 375 SLDNAQRVFKDMPQK-NEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVG 433
Query: 427 MYAA 430
+ +A
Sbjct: 434 LLSA 437
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 45/289 (15%)
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
AL F M + PD T +CAN+ +L H + K + ++LI
Sbjct: 106 ALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLIT 165
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGV 317
Y+RCG + AR+VF + R VSWNS+I G+A G EA+E F M +++GF+PD +
Sbjct: 166 AYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEM 225
Query: 318 SFTGALTACSHAGLIEDGLRYFD--IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
S L AC G +E G R+ + ++++ ++ I ++ +Y++ G LE A +
Sbjct: 226 SLVSLLGACGELGDLELG-RWVEGFVVERGMTLNSYIG--SALISMYAKCGELESARRIF 282
Query: 376 ENMPMK----------------------------------PNEVVLGSLLAACRTKGDII 401
+ M + N++ L ++L+AC T G +
Sbjct: 283 DGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALD 342
Query: 402 LAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGR 447
L +++ +Y G + + L +MYA G D A ++ + M +
Sbjct: 343 LGKQIDEYAS--QRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQK 389
>gi|357140545|ref|XP_003571826.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Brachypodium distachyon]
Length = 489
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 259/422 (61%), Gaps = 9/422 (2%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+H+TF L A S L L H L +LGL ++ + + + MYA DLA
Sbjct: 58 PSHLTFPFLGRAAARLASPRLALSLHSHPL--RLGLLPCDLHIANSFVHMYAACALPDLA 115
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
+FD + + +WNA++DGY + D+ +A +FD MP RD +SW+A+++G VK G +
Sbjct: 116 RRLFDEIPRPNPVSWNALLDGYAKCRDLSAAREVFDRMPHRDVVSWSAMIDGCVKCGEYR 175
Query: 198 EALECFREMQIS----GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
EAL F M+ + GV + VT+IS+L ACA++G L G +HRY+ ++ F N+++
Sbjct: 176 EALALFEMMEAAATGHGVRANDVTMISMLGACAHLGDLRRGRQMHRYLQERGFLLNLRLA 235
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRT--LVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
+L+D+Y++CG I A +VF+ + + ++ WN++I G AV+G E +E F MQ G
Sbjct: 236 TSLVDMYAKCGAISEALEVFRAVPVASTDVLMWNAMIGGLAVHGMGMETVELFQEMQHSG 295
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
PD +++ G L+AC H GL+++ R+F ++ + P +EHY C+VD+ SRAGRLE+A
Sbjct: 296 VVPDEITYLGLLSACVHGGLVDEAWRFFCSLEA-QGLRPHVEHYACLVDVLSRAGRLEEA 354
Query: 372 LNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAV 431
VV++MPM+P+ VLG++L AC G + L E + + LV L P D Y+ L+N+YA
Sbjct: 355 YGVVKSMPMEPSVSVLGAILNACHLHGWVELGEVVGRQLVRLQPDHDGRYIGLSNIYAVA 414
Query: 432 GKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
+W A K R+ M RG++K PG S I++G F+A D++H S IY++L+L++ D+
Sbjct: 415 KRWQEAKKARKVMSERGLKKIPGFSEIDVGGRPCRFIAQDKTHSGSTDIYALLDLIAMDM 474
Query: 492 KL 493
K+
Sbjct: 475 KM 476
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRM----TLHGTNPNHITFITLLSGCADFPSQCLFL 100
V W++ I + G EA F M T HG N +T I++L CA L
Sbjct: 158 VVSWSAMIDGCVKCGEYREALALFEMMEAAATGHGVRANDVTMISMLGACAHLGD--LRR 215
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS--FTWNAMIDG 158
G +H + + G N+ + T+L+DMYAK G + A VF A+ V S+ WNAMI G
Sbjct: 216 GRQMHRYLQERGF-LLNLRLATSLVDMYAKCGAISEALEVFRAVPVASTDVLMWNAMIGG 274
Query: 159 YMRRGDIESAVRMFDEMP----VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEP- 213
G V +F EM V D I++ LL+ V G +EA F ++ G+ P
Sbjct: 275 LAVHGMGMETVELFQEMQHSGVVPDEITYLGLLSACVHGGLVDEAWRFFCSLEAQGLRPH 334
Query: 214 --DYVTIISVLN 223
Y ++ VL+
Sbjct: 335 VEHYACLVDVLS 346
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/455 (36%), Positives = 256/455 (56%), Gaps = 35/455 (7%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ +F LL A+ + L G +H L GLD +++ VGT L+ MYA+ + A
Sbjct: 104 PDSFSFAFLLKAAAN--CRALTNGLQLHCLAVGYGLD-SHLFVGTTLISMYAECACLVFA 160
Query: 138 TVVFD-------------------------------AMRVKSSFTWNAMIDGYMRRGDIE 166
VFD M +++ +WN M+ GY + G+++
Sbjct: 161 RKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQ 220
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A +F +MP++D +SW+ ++ GF G F +A FRE++ G+ P+ V++ VL+ACA
Sbjct: 221 LAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACA 280
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
G G +H +V K F + V N LID YS+CG ++ AR VF M +R+ VSW +
Sbjct: 281 QAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTA 340
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+I G A++G+ EA+ FN M++ KPD ++F L ACSHAGL++ G YF M Y
Sbjct: 341 MIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTY 400
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+ P IEHYGC+VDLY RAG+L+ A + V MP+ PN++V +LL AC G++ LA ++
Sbjct: 401 GIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQV 460
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHE 466
+ L +LDP ++VLL+N+YA GKW +RR+M + ++K PG S IE+ I+
Sbjct: 461 KRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYS 520
Query: 467 FMAGDRSH-IESEHIYSMLELLSFDLKLCGYVPET 500
F+AG++ + I E + E++S GYVPE
Sbjct: 521 FVAGEKQNDIAVEAHQKLREIMSRLRIEGGYVPEV 555
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 36/259 (13%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K + V W++ I +G +A F + G PN ++ +LS CA +
Sbjct: 228 KMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQ--AGAF 285
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G ++HG V K G + V AL+D Y+K G +D+A +VFD M +S+ +W AMI G
Sbjct: 286 EFGRILHGFVEKSGF-LQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAG 344
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
G E A+R+F+EM EE S ++PD +T
Sbjct: 345 MAMHGYGEEAIRLFNEM---------------------EE----------SNIKPDSITF 373
Query: 219 ISVLNACANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
IS+L AC++ G + +G + R V + ++ ++DLY R G ++ A +M
Sbjct: 374 ISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMP 433
Query: 278 -KRTLVSWNSIIVGFAVNG 295
+ W +++ +++G
Sbjct: 434 ISPNDIVWRTLLGACSIHG 452
>gi|357150199|ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Brachypodium distachyon]
Length = 523
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/428 (39%), Positives = 246/428 (57%), Gaps = 6/428 (1%)
Query: 68 FTRMTLHG-TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD 126
F RM G PN + +L Q L IH CK G +V + T+LLD
Sbjct: 100 FLRMLRRGRPAPNQFVYPLVLRAACAIGVQ---LVRSIHSHACKSGFHAYDV-IRTSLLD 155
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTAL 186
Y+++G M A +FD + ++ +W A++ GY R G I A+ +FD MP RD +W A+
Sbjct: 156 GYSRYGMMLDARKLFDGLTERNVISWTALVSGYARAGKIGDAIVLFDRMPERDVAAWNAM 215
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
+ G + G F EA+ M G + + T+ VL+AC ++G L IG +H Y +
Sbjct: 216 ITGCTQNGLFVEAVGICSRMVDEGFQLNGTTVSCVLSACGHLGMLKIGKVVHGYAWRSCV 275
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
V N LID+Y +CG ++ AR +F R+L +WNS+I A++G A+ F+
Sbjct: 276 GFGSSVVNGLIDMYGKCGNLKEARWMFDEFSDRSLTTWNSLINCLALHGHSKSAIAVFDE 335
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M+ EG +PD V+F G L AC+H G +++GL YF +M R+ P IEHYGCIVDL RAG
Sbjct: 336 MRDEGIEPDVVTFVGLLNACTHGGFVDEGLTYFKLMCDELRIEPEIEHYGCIVDLLGRAG 395
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN 426
R EDA+NV+ +M ++P+EV+ GSLL ACRT + LAE ++ L+ L+P + V+LAN
Sbjct: 396 RFEDAMNVINDMKVQPDEVIWGSLLNACRTHRQLELAEFSVRKLLQLNPNNANYVVMLAN 455
Query: 427 MYAAVGKWDGAGKIRRTMKGRGIQKK-PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
+Y+ G W+ KIR+ MK + KK PG S IE+ H F +GD +H ESE IY L+
Sbjct: 456 LYSEGGSWEEVTKIRKLMKEDIMGKKLPGCSWIEVDRKTHRFYSGDDAHPESEDIYDTLD 515
Query: 486 LLSFDLKL 493
L+ +++
Sbjct: 516 ELAASMEM 523
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 157/367 (42%), Gaps = 68/367 (18%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T + WT+ +S + R+G+I +A + F RM + + +++GC LF+
Sbjct: 174 TERNVISWTALVSGYARAGKIGDAIVLFDRM----PERDVAAWNAMITGCT---QNGLFV 226
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTW-------- 152
A+ +C +D + GT + + + G + + + +V + W
Sbjct: 227 EAVG---ICSRMVDEGFQLNGTTVSCVLSACGHLGMLKI----GKVVHGYAWRSCVGFGS 279
Query: 153 ---NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
N +ID Y + G+++ A MFDE R +W +L+N G+ + A+ F EM+
Sbjct: 280 SVVNGLIDMYGKCGNLKEARWMFDEFSDRSLTTWNSLINCLALHGHSKSAIAVFDEMRDE 339
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEF 268
G+EPD VT + +LNAC + G + GL + + + + ++ ++DL R G E
Sbjct: 340 GIEPDVVTFVGLLNACTHGGFVDEGLTYFKLMCDELRIEPEIEHYGCIVDLLGRAGRFE- 398
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
+A+ N M+ +PD V + L AC
Sbjct: 399 ------------------------------DAMNVINDMK---VQPDEVIWGSLLNACRT 425
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV-DLYSRAGRLEDALNVVENMPMKPNEVVL 387
+E L F + +K+ +++P +Y ++ +LYS G E+ + + M E ++
Sbjct: 426 HRQLE--LAEFSV-RKLLQLNPNNANYVVMLANLYSEGGSWEEVTKIRKLM----KEDIM 478
Query: 388 GSLLAAC 394
G L C
Sbjct: 479 GKKLPGC 485
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/455 (36%), Positives = 257/455 (56%), Gaps = 35/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I+ G + + F +M G NPN TFI++L C+ + LG +H
Sbjct: 258 VSWTALITGFVAEGYGSGLRI-FNQMLAEGFNPNMYTFISILRSCSSLSD--VDLGKQVH 314
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K LD N+ VGTAL+DMYA K+ F +
Sbjct: 315 AQIVKNSLDGND-FVGTALVDMYA-----------------KNRF--------------L 342
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A +F+ + RD +WT ++ G+ + G E+A++CF +MQ GV+P+ T+ S L+ C
Sbjct: 343 EDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGC 402
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ + TL G +H +K ++ V + L+D+Y++CGC+E A VF + R VSWN
Sbjct: 403 SRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWN 462
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+II G++ +G G+AL+ F +M EG PD V+F G L+ACSH GLIE+G ++F+ + KI
Sbjct: 463 TIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKI 522
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y ++P IEHY C+VD+ RAG+ + + +E M + N ++ ++L AC+ G+I ER
Sbjct: 523 YGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGER 582
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
L +L+P +DSNY+LL+NM+AA G WD +R M RG++K+PG S +E+ +H
Sbjct: 583 AAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVH 642
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F++ D SH + I+ L+ L L GY P T
Sbjct: 643 VFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNT 677
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 159/381 (41%), Gaps = 68/381 (17%)
Query: 47 QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
QW +S + EA F M N F +L+S A G IH
Sbjct: 57 QWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDN--HYGESIHA 114
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
VCK G + +++++ A + MY M+ +E
Sbjct: 115 CVCKYGFE-SDILISNAFVTMY-------------------------------MKTQSVE 142
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
+ + F M + + S LL+GF ++ ++ + G EP+ T IS+L CA
Sbjct: 143 NGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCA 202
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ G L G IH V+K + + N+L+++Y++CG +A +VF + +R +VSW +
Sbjct: 203 SKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTA 262
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDG 335
+I GF G+ G L FN M EGF P+ +F L +CS HA ++++
Sbjct: 263 LITGFVAEGY-GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNS 321
Query: 336 L-----------------RYFDIMKKIYR--VSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
L R+ + + I+ + + + IV Y++ G+ E A+
Sbjct: 322 LDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFI 381
Query: 377 NMP---MKPNEVVLGSLLAAC 394
M +KPNE L S L+ C
Sbjct: 382 QMQREGVKPNEFTLASSLSGC 402
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 141/332 (42%), Gaps = 40/332 (12%)
Query: 136 LATVVFDAMR---VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVK 192
L ++F ++ S W+++++ Y++ ++ A ++ +EMP++D W L+
Sbjct: 8 LKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANS 67
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
+EA++ F M+ + + + S+++A A++G G IH V K F+ ++ +
Sbjct: 68 PYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILI 127
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
N + +Y + +E Q F+ M L S N+++ GF + + EGF
Sbjct: 128 SNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGF 187
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
+P+ +F L C+ G + +G + K ++P + +V++Y++ G A
Sbjct: 188 EPNMYTFISILKTCASKGDLNEGKAIHGQVIK-SGINPDSHLWNSLVNVYAKCGSANYAC 246
Query: 373 NVVENMPMK---------------------------------PNEVVLGSLLAACRTKGD 399
V +P + PN S+L +C + D
Sbjct: 247 KVFGEIPERDVVSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSD 306
Query: 400 IILAERLMKYLV--DLDPGVDSNYVLLANMYA 429
+ L +++ +V LD G D L +MYA
Sbjct: 307 VDLGKQVHAQIVKNSLD-GNDFVGTALVDMYA 337
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 276/459 (60%), Gaps = 7/459 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S IS + + G EA + F++M + P++ T ++LS CA+ + L +G I
Sbjct: 240 VSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANL--EKLNIGKQI 297
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS--SFTWNAMIDGYMRR 162
H + + + + VG AL+ MYAK G +++A ++ + R + + +++DGY +
Sbjct: 298 HAYILRAETETSGA-VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKL 356
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G+++ A +F+++ RD ++WTA++ G+V+ G + +ALE FR M G EP+ T+ ++L
Sbjct: 357 GNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAML 416
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTL 281
+ +++ L G IH +K V N LI +Y++ G I A++VF + K+ +
Sbjct: 417 SVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEI 476
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSW S+I+ A +G EA+ F M G KPD +++ G L+AC+H GL+E G +Y+++
Sbjct: 477 VSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNM 536
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M +++ + P + HY C++DLY RAG L++A +E+MP++P+ + GSLLA+C+ +
Sbjct: 537 MTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNAD 596
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LA+ + L+ +DPG Y+ LAN+Y+A GKW+ A + R+ MK RG++K+ G+S I I
Sbjct: 597 LAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIK 656
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ +H F D H + + IY ++ + ++K G++P+T
Sbjct: 657 NEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDT 695
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 223/460 (48%), Gaps = 79/460 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I + + G A F +M P+ T +LS CA +Q L +G IH
Sbjct: 108 VSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCA--ANQTLDIGRKIH 165
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V KLGL + V V T+LL+MYAK G +A VVFD M VK+ TWNA+I YM+ G
Sbjct: 166 SFVVKLGLG-SCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQF 224
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNA 224
E A F++MP RD +SW ++++G+ ++GY EAL F +M ++PD T+ S+L+A
Sbjct: 225 ELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSA 284
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF---------------- 268
CAN+ L IG IH Y+L+ + + + V N LI +Y++ G +E
Sbjct: 285 CANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNII 344
Query: 269 -----------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
AR++F ++ R +V+W ++IVG+ NG +ALE F M EG
Sbjct: 345 AFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEG 404
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL-- 368
+P+ + L+ S ++E G + + +K +P + + ++ +Y++ G +
Sbjct: 405 PEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTN--ALIAMYAKTGNINV 462
Query: 369 ------------------------------EDALNVVENM---PMKPNEVVLGSLLAACR 395
++A+N+ E M MKP+ + +L+AC
Sbjct: 463 AKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACT 522
Query: 396 TKGDIILAER---LMKYLVDLDPGVDSNYVLLANMYAAVG 432
G + + +M + +++P + S+Y + ++Y G
Sbjct: 523 HVGLVEQGRKYYNMMTEVHEIEPTL-SHYACMIDLYGRAG 561
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 184/389 (47%), Gaps = 50/389 (12%)
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
F G +H + K GL V + L+ YAK G + A VFD M +KS+F+WN +I G
Sbjct: 27 FAGRSVHCQIIKKGLHLG-VYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISG 85
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y ++G+ E + R+ EMP D +SWTA++ G+ + G F+ A+ F +M V P T+
Sbjct: 86 YAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTV 145
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG-------------- 264
+VL++CA TL IG IH +V+K V V +L+++Y++CG
Sbjct: 146 SNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTV 205
Query: 265 -----------------CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
E A F++M R +VSWNS+I G++ G+ EAL F+ M
Sbjct: 206 KNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKM 265
Query: 308 QKE-GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI--YRVSPRIEHYGCI----VD 360
E KPD + L+AC++ L +I K+I Y + E G + +
Sbjct: 266 LNEPSLKPDNFTLASILSACAN-------LEKLNIGKQIHAYILRAETETSGAVGNALIS 318
Query: 361 LYSRAGRLEDALNVVE-NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
+Y+++G +E A +VE N N + SLL G++ A + L D D
Sbjct: 319 MYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVA-- 376
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
+ + Y G W+ A ++ R M G
Sbjct: 377 -WTAMIVGYVQNGLWNDALELFRLMVNEG 404
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 264/479 (55%), Gaps = 28/479 (5%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA-------------D 92
+ W + + + + +A F RM + I++ T++SG A +
Sbjct: 202 ISWNCLMGGYVKRNMLGDARQLFDRMPVRDV----ISWNTMISGYAQVGDLSQAKRLFNE 257
Query: 93 FPSQCLF-LGAMIHGLVCKLGLDR----------NNVMVGTALLDMYAKFGRMDLATVVF 141
P + +F AM+ G V +D N + A+L Y ++ +M +A +F
Sbjct: 258 SPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELF 317
Query: 142 DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALE 201
+AM ++ +WN MI GY + G I A ++FD MP RD +SW A+++G+ + G++EEAL
Sbjct: 318 EAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALN 377
Query: 202 CFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
F EM+ G + T L+ CA++ L +G +H V+K F+ V N L+ +Y
Sbjct: 378 MFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYF 437
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
+CG + A VF+ + ++ +VSWN++I G+A +GF +AL F SM+K G KPD ++ G
Sbjct: 438 KCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVG 497
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+ACSH+GLI+ G YF M + Y V P +HY C++DL RAGRLE+A N++ NMP
Sbjct: 498 VLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFD 557
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
P G+LL A R G+ L E+ + + ++P YVLL+N+YAA G+W GK+R
Sbjct: 558 PGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMR 617
Query: 442 RTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
M+ G+QK G S +E+ + IH F GD H E + IY+ LE L ++ GYV T
Sbjct: 618 SKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSST 676
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 169/365 (46%), Gaps = 34/365 (9%)
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
+ R + + A++ Y + + LA +FD M + F+WN M+ GY+R + A ++F
Sbjct: 72 MPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLF 131
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
D MP +D +SW A+L+G+ + G+ +EA E F +M + ++ +L A + G L
Sbjct: 132 DLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMP----HRNSISWNGLLAAYVHNGRLK 187
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
R + + + N L+ Y + + ARQ+F RM R ++SWN++I G+A
Sbjct: 188 EA----RRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYA 243
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
G + +A FN E D ++T ++ G++++ +YFD M +S
Sbjct: 244 QVGDLSQAKRLFN----ESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEIS--- 296
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD 412
Y ++ Y + ++ A + E MP + N +++ G I A +L D
Sbjct: 297 --YNAMLAGYVQYKKMVIAGELFEAMPCR-NISSWNTMITGYGQNGGIAQARKLF----D 349
Query: 413 LDPGVDS-NYVLLANMYAAVGKWDGAGKIRRTMKGRG-----------IQKKPGLSSIEI 460
+ P D ++ + + YA G ++ A + MK G + ++++E+
Sbjct: 350 MMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALEL 409
Query: 461 GSGIH 465
G +H
Sbjct: 410 GKQVH 414
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 173/461 (37%), Positives = 264/461 (57%), Gaps = 30/461 (6%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I+ + + G EA F +M G+ PN +T I++LS CA LGA
Sbjct: 222 VTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACAS-------LGAF-- 272
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G++ + + LL + FG D +V+ NA+ID Y +
Sbjct: 273 ----SQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY-----------NALIDMYSKCRSF 317
Query: 166 ESAVRMFDEMPV--RDAISWTALLNGFVKRGYFEEALECFREM--QISGVEPDYVTIISV 221
++A +FD++P+ R+ ++WT ++ G + G +AL+ F EM + GV P+ TI +
Sbjct: 318 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 377
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVK--VCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACA++ + IG IH YVL+ D+ V N LI++YS+CG ++ AR VF M ++
Sbjct: 378 LMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQK 437
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+ +SW S++ G+ ++G EAL+ F+ M+K GF PD ++F L ACSH G+++ GL YF
Sbjct: 438 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYF 497
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
D M Y ++PR EHY +DL +R GRL+ A V++MPM+P VV +LL+ACR +
Sbjct: 498 DSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSN 557
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ LAE + LV+++ D +Y L++N+YA G+W +IR MK GI+K+PG S ++
Sbjct: 558 VELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 617
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
G F GDRSH S IY++LE L +K GYVPET
Sbjct: 618 GQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPET 658
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 192/374 (51%), Gaps = 46/374 (12%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTL--HGTNPNH----ITFITLLSGCADFPS 95
++ + W S +S H +S A F++MTL H N I+ + +L C
Sbjct: 76 IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL-- 133
Query: 96 QCLFLGAMIHGLVCKLG--LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWN 153
+ + +HG + G LD V VG AL+D YAK G M+ A VF+ M K +WN
Sbjct: 134 KAVPQTKEVHGNAIRNGTFLD---VFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWN 190
Query: 154 AMIDGYMRRGDIESAVRMFDEM-----PVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
AM+ GY + G+ ++A +F M P+ D ++WTA++ G+ +RG EAL FR+M
Sbjct: 191 AMVAGYSQSGNFKAAFELFKNMRKENIPL-DMVTWTAVIAGYSQRGCSHEALNVFRQMIF 249
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK-------QDF---KDNVKVCNTLID 258
SG P+ VTIISVL+ACA++G G+ IH Y LK DF +++ V N LID
Sbjct: 250 SGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 309
Query: 259 LYSRCGCIEFARQVFQR--MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE--GFKP 314
+YS+C + AR +F + +R +V+W +I G A G +AL+ F M E G P
Sbjct: 310 MYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAP 369
Query: 315 DGVSFTGALTACSHAGLIEDG-------LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+ + + L AC+H I G LR+ Y V+ C++++YS+ G
Sbjct: 370 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVA------NCLINMYSKCGD 423
Query: 368 LEDALNVVENMPMK 381
++ A +V ++M K
Sbjct: 424 VDTARHVFDSMSQK 437
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 163/390 (41%), Gaps = 95/390 (24%)
Query: 75 GTNPNHITFITLLSGCADFPS-QCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR 133
GT +H T +L C + PS +C G+ HGL+C G + N
Sbjct: 5 GTRLDHFTLPHVLKACGELPSYRC---GSAFHGLICCNGFESN----------------- 44
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR---DAISWTALLNGF 190
F NA++ Y R G +E A +FDE+ R D ISW ++++
Sbjct: 45 ---------------VFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAH 89
Query: 191 VKRGYFEEALECFREMQI------SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
VK AL+ F +M + + D ++I+++L AC ++ + +H ++
Sbjct: 90 VKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRN 149
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
+V V N LID Y++CG +E A +VF M + +VSWN+++ G++ +G A E F
Sbjct: 150 GTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELF 209
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
+M+KE D V++T + YS+
Sbjct: 210 KNMRKENIPLDMVTWTAVIAG------------------------------------YSQ 233
Query: 365 AGRLEDALNVVENMPMK---PNEVVLGSLLAACRTKGDI-----ILAERLMKYLVDLDP- 415
G +ALNV M PN V + S+L+AC + G I A L L+ LD
Sbjct: 234 RGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDND 293
Query: 416 --GVDSN---YVLLANMYAAVGKWDGAGKI 440
G D + Y L +MY+ + A I
Sbjct: 294 FGGEDEDLMVYNALIDMYSKCRSFKAARSI 323
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
M +G D+ T+ VL AC + + G H + F+ NV +CN L+ +YSRCG
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 266 IEFARQVFQRMHKRTL---VSWNSIIVGFAVNGFVGEALEYFNSM------QKEGFKPDG 316
+E A +F + +R + +SWNSI+ + AL+ F+ M + + D
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 317 VSFTGALTACS-----------HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
+S L AC H I +G + D+ ++D Y++
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNG-TFLDVFVG-----------NALIDAYAKC 168
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
G +E+A+ V M K + V +++A G+ A L K
Sbjct: 169 GLMENAVKVFNMMEFK-DVVSWNAMVAGYSQSGNFKAAFELFK 210
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 171/460 (37%), Positives = 270/460 (58%), Gaps = 12/460 (2%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V T+ IS +C+ GR+AEA F M N I++ T++SG Q
Sbjct: 168 VKDVVARTNMISGYCQEGRLAEARELFDEMPRR----NVISWTTMISGYVQ-NGQVDVAR 222
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ + K N + TA+L Y + GR++ A+ +FDAM VK+ NAMI G+ +
Sbjct: 223 KLFEVMPEK------NEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQ 276
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++ A ++FD++ +D +W+A++ + ++G+ EAL F MQ GV+ ++ ++ISV
Sbjct: 277 NGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISV 336
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+ CA++ +L G +H ++K F +V V + LI +Y +CG + ARQ+F R + +
Sbjct: 337 LSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDI 396
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
V WNSII G+A +G V EAL+ F+ M G DGV+F G L+ACS+ G +++GL F+
Sbjct: 397 VMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFES 456
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
MK Y V P+ EHY C+VDL RAG + DA+++++ MP++ + ++ G+LL ACRT ++
Sbjct: 457 MKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMN 516
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LAE K L+ L+P Y+LL+N+YA+ G+W ++RR M+ + + K PG S IE+
Sbjct: 517 LAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVE 576
Query: 462 SGIHEFMAG-DRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F G H E I MLE L L+ GY P++
Sbjct: 577 KRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDS 616
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 180/416 (43%), Gaps = 77/416 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV W IS + ++ ++EA F M N +++ ++ G
Sbjct: 78 TVSWNGLISGYVKNRMVSEARKAFDTMP----ERNVVSWTAMVRGYVQ------------ 121
Query: 105 HGLVCK-----LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
GLV + + NV+ T +L + R+D A +FD M VK MI GY
Sbjct: 122 EGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGY 181
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ G + A +FDEMP R+ ISWT +++G+V+ G + A + F M E + V+
Sbjct: 182 CQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMP----EKNEVSWT 237
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV-----CNTLIDLYSRCGCIEFARQVFQ 274
++L G R + D + V CN +I + + G + ARQVF
Sbjct: 238 AMLMGYTQGG---------RIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFD 288
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS------- 327
++ ++ +W+++I + GF EAL F MQ+EG + + S L+ C+
Sbjct: 289 QIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDH 348
Query: 328 ----HAGLIEDG---------------LRYFDIMK--KIY-RVSPR-IEHYGCIVDLYSR 364
HA L++ ++ D++K +I+ R SP+ I + I+ Y++
Sbjct: 349 GRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQ 408
Query: 365 AGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDI-----ILAERLMKYLVD 412
G +E+AL V M M + V +L+AC G + I KYLV+
Sbjct: 409 HGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVE 464
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 177/398 (44%), Gaps = 44/398 (11%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC--ADFPSQCLFLGA 102
+ + S I+R+ R G+I A F M G +++ ++++G + P + +L
Sbjct: 16 AIAYNSQIARYARIGQIESARRVFDEMPDKGI----VSWNSMVAGYFQNNRPREARYLFD 71
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+ N + L+ Y K + A FD M ++ +W AM+ GY++
Sbjct: 72 ---------KMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQE 122
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G + A +F +MP ++ +SWT +L G ++ +EA F M + D V +++
Sbjct: 123 GLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVK----DVVARTNMI 178
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+ G L R + + + NV T+I Y + G ++ AR++F+ M ++ V
Sbjct: 179 SGYCQEGRLAEA----RELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEV 234
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SW ++++G+ G + EA E F++M + V+ + G + + FD +
Sbjct: 235 SWTAMLMGYTQGGRIEEASELFDAMPVKAV----VACNAMILGFGQNGEVAKARQVFDQI 290
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRT--- 396
++ + + ++ +Y R G +ALN+ M ++ N L S+L+ C +
Sbjct: 291 REKDDGT-----WSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLAS 345
Query: 397 --KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
G + AE L+K D D V S +L MY G
Sbjct: 346 LDHGRQVHAE-LVKSQFDSDVFVAS---VLITMYVKCG 379
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 153/332 (46%), Gaps = 22/332 (6%)
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YA+ G+++ A VFD M K +WN+M+ GY + A +FD+MP R+ +SW L+
Sbjct: 26 YARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLI 85
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
+G+VK EA + F M E + V+ +++ G + + Q +
Sbjct: 86 SGYVKNRMVSEARKAFDTMP----ERNVVSWTAMVRGYVQEGLVSEA----ETLFWQMPE 137
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
NV ++ + I+ AR +F M + +V+ ++I G+ G + EA E F+ M
Sbjct: 138 KNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEM 197
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+ +S+T ++ G ++ + F++M + VS + ++ Y++ GR
Sbjct: 198 PRRNV----ISWTTMISGYVQNGQVDVARKLFEVMPEKNEVS-----WTAMLMGYTQGGR 248
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
+E+A + + MP+K V +++ G++ A ++ + + D D + + +
Sbjct: 249 IEEASELFDAMPVKAV-VACNAMILGFGQNGEVAKARQVFDQIREKD---DGTWSAMIKV 304
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKK-PGLSSI 458
Y G A + M+ G+Q P L S+
Sbjct: 305 YERKGFEVEALNLFALMQREGVQSNFPSLISV 336
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/493 (35%), Positives = 276/493 (55%), Gaps = 42/493 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W IS + + ++ +A M + +T ++LS A + + LG
Sbjct: 349 VVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASA--VTSNIKLGKEG 406
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDA--------------------- 143
H + L+ ++V+V +++DMYAK R+D A VFD+
Sbjct: 407 HCYCIRRNLE-SDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGL 465
Query: 144 ----------MRVKSS----FTWNAMIDGYMRRGDIESAVRMFDEMPV----RDAISWTA 185
M+ S +WN++I G++R G + A MF +M + I+WT
Sbjct: 466 SGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTT 525
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
L++G + G+ EA+ F++MQ +G+ P +I SVL AC ++ +L G IH ++ + +
Sbjct: 526 LISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHE 585
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
F +V V +L+D+Y++CG I+ A++VF M + L +N++I +A++G EAL F
Sbjct: 586 FCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFK 645
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
+QKEG +PD ++FT L+ACSHAGL+ +GL F M + ++P +EHYGC+V L SR
Sbjct: 646 HLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRC 705
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLA 425
G L++AL ++ MP +P+ +LGSLL ACR +I L E L K+L L+P NYV L+
Sbjct: 706 GNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALS 765
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
N YAA G+W +R MK RG++K PG S I+ G ++ F+AGD SH ++E IY+ML
Sbjct: 766 NAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLA 825
Query: 486 LLSFDLKLCGYVP 498
+L +++ GYVP
Sbjct: 826 MLLSEMRFMGYVP 838
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 181/400 (45%), Gaps = 57/400 (14%)
Query: 3 SSATATILPQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIA 62
+S T P P H + + + +++ ++ + + IS C+ G +
Sbjct: 2 ASLPITTTPNPHTSHFKPRKSSKFASTRLAKLQEKDENRRSLYKSYFHHISSLCKDGHLQ 61
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
E+ + M + LL GC + L G IH + K G
Sbjct: 62 ESVHLLSEMEFEDFQIGPEIYGELLQGCV--YERALHTGQQIHARILKNG---------- 109
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
D +AK ++ VVF A K F E AVR+F + VR+ S
Sbjct: 110 ---DFFAKNEYVETKLVVFYA---KCDFP--------------EVAVRLFHRLRVRNVFS 149
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
W A++ + G+ E+AL F EMQ +GV PD + +VL AC ++ +G+G +H YVL
Sbjct: 150 WAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVL 209
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
K F V V ++L+D+Y +CG +E AR+VF M ++ +V+WNS+IVG+ NG EA++
Sbjct: 210 KMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAID 269
Query: 303 YFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLRYFDIMKKIYRVSPR 351
F M+ EG +P V+ L+A + HA I + L +I+
Sbjct: 270 VFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILG-------- 321
Query: 352 IEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLL 391
I++ YS+ G +EDA V M K +VV +LL
Sbjct: 322 ----SSIINFYSKVGLIEDAELVFSRMLEK--DVVTWNLL 355
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 177/369 (47%), Gaps = 45/369 (12%)
Query: 29 PQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLS 88
P+++++ + + V W + + CR G +A L F M +G P++ +L
Sbjct: 132 PEVAVRLFH-RLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLK 190
Query: 89 GCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS 148
C Q + LG +HG V K+G V V ++L+DMY K G +
Sbjct: 191 ACGSL--QLIGLGKGVHGYVLKMGFGAC-VFVSSSLVDMYGKCGVL-------------- 233
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
E A ++FD M ++ ++W +++ G+V+ G +EA++ F +M++
Sbjct: 234 -----------------EDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRV 276
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
G+EP VT+ S L+A AN+ L G H + + + +++I+ YS+ G IE
Sbjct: 277 EGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIED 336
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
A VF RM ++ +V+WN +I + + VG+AL + M+ E + D V+ + L+A +
Sbjct: 337 AELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAV 396
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEH----YGCIVDLYSRAGRLEDALNVVENMPMKPNE 384
I+ G Y + +E I+D+Y++ R++DA V ++ + +
Sbjct: 397 TSNIKLGKE-----GHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTER-DL 450
Query: 385 VVLGSLLAA 393
V+ +LLAA
Sbjct: 451 VLWNTLLAA 459
>gi|15225365|ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g44880
gi|2344896|gb|AAC31836.1| hypothetical protein [Arabidopsis thaliana]
gi|330255385|gb|AEC10479.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 168/471 (35%), Positives = 267/471 (56%), Gaps = 69/471 (14%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM--- 134
P++ TF TL C+ S C++ G +H + + G ++ V T ++DMYAKFG+M
Sbjct: 76 PDNFTFTTLTKSCS--LSMCVYQGLQLHSQIWRFGF-CADMYVSTGVVDMYAKFGKMGCA 132
Query: 135 ----------------------------DLATVVFDAM-RVKSSFTWNAMIDGYMRRGDI 165
DLA+ +FD M VK +NAM+DG+++ GD+
Sbjct: 133 RNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDM 192
Query: 166 ESAVRMFDEM-------------------------------PVRDAISWTALLNGFVKRG 194
SA R+FDEM P R+ +SW ++ G+ +
Sbjct: 193 TSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNK 252
Query: 195 YFEEALECFREMQ-ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
+E + F+EMQ + ++PD VTI+SVL A ++ G L +G W H +V ++ VKVC
Sbjct: 253 QPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVC 312
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
++D+YS+CG IE A+++F M ++ + SWN++I G+A+NG AL+ F +M E K
Sbjct: 313 TAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-K 371
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
PD ++ +TAC+H GL+E+G ++F +M+++ ++ +IEHYGC+VDL RAG L++A +
Sbjct: 372 PDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAED 430
Query: 374 VVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGK 433
++ NMP +PN ++L S L+AC DI AER++K V+L+P D NYVLL N+YAA +
Sbjct: 431 LITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKR 490
Query: 434 WDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
WD G ++ M+ +K+ G S IEI + EF++GD +H I+ +L
Sbjct: 491 WDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVL 541
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 84/170 (49%), Gaps = 8/170 (4%)
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF-QRMHKRTLVSWNSIIVGFAVNGFVGE 299
+L+ + NV++ + + + I +AR++F QR + NS+I + +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 300 ALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC- 357
+ + ++KE F PD +FT +CS + + GL+ + +I+R + Y
Sbjct: 61 SFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQ---LHSQIWRFGFCADMYVST 117
Query: 358 -IVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+VD+Y++ G++ A N + MP + +EV +L++ G++ LA +L
Sbjct: 118 GVVDMYAKFGKMGCARNAFDEMPHR-SEVSWTALISGYIRCGELDLASKL 166
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 266/461 (57%), Gaps = 36/461 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + IS + +G EA F M P+ T++T+LS CA S + LG
Sbjct: 158 VKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAH--SGSIELG 215
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H V G D N +V NA+ID Y +
Sbjct: 216 RQVHSWVDDHGFDSNLKIV--------------------------------NALIDLYSK 243
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++E+A +F + +D ISW L+ G+ ++EAL F+EM SG P+ VT++SV
Sbjct: 244 CGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSV 303
Query: 222 LNACANVGTLGIGLWIHRYVLK--QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACA++G + IG WIH Y+ K + + + +LID+Y++CG IE A QVF M +
Sbjct: 304 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHK 363
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+L SWN++I GFA++G + + F+ M+K G +PD ++F G L+ACSH+G+++ G F
Sbjct: 364 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIF 423
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M + Y+++P++EHYGC++DL +G ++A ++ M M+P+ V+ SLL AC+ G+
Sbjct: 424 RSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGN 483
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ LAE + L+ ++P S+Y+LL+N+YA+ G+W+ +IR + G+ ++K PG SSIE
Sbjct: 484 VELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIE 543
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ S + EF+ GD+ H ++ IY MLE + L+ G+VP+T
Sbjct: 544 VDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDT 584
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/403 (33%), Positives = 212/403 (52%), Gaps = 14/403 (3%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I H S + + M G PN TF LL CA S+ G IHG
Sbjct: 32 WNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCA--KSKTFTEGQQIHGQ 89
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG D + + V T+L+ MY + R++ A VFD + ++ A+I GY RGDI S
Sbjct: 90 VLKLGFDLD-LYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRS 148
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++FDE+PV+D +SW A+++G+ + G ++EALE F EM V PD T ++VL+ACA+
Sbjct: 149 AQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAH 208
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G++ +G +H +V F N+K+ N LIDLYS+CG +E A +FQ + + ++SWN++
Sbjct: 209 SGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTL 268
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KKI 345
I G+ EAL F M + G P+ V+ L AC+H G I+ G R+ + K++
Sbjct: 269 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIG-RWIHVYIDKRL 327
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSLLAACRTKGDII 401
V+ ++D+Y++ G +E A V +M K N ++ G + R
Sbjct: 328 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHG-RADASFD 386
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
L R+ K ++ D D +V L + + G D I R+M
Sbjct: 387 LFSRMRKIGIEPD---DITFVGLLSACSHSGMLDLGRHIFRSM 426
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 154/367 (41%), Gaps = 60/367 (16%)
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP----VRDAISWTAL 186
F + AT VF+ ++ + WN MI G+ D S++ ++ M + ++ ++ L
Sbjct: 11 FDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFL 70
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
L K F E + ++ G + D V T I +++ + L+ +
Sbjct: 71 LKSCAKSKTFTEGQQIHGQVLKLGFDLDLY-----------VHTSLISMYVQNWRLEDAY 119
Query: 247 K-------DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
K +V LI Y+ G I A+++F + + +VSWN++I G+A G E
Sbjct: 120 KVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKE 179
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
ALE F M K +PD ++ L+AC+H+G IE G + + + ++ ++
Sbjct: 180 ALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDD-HGFDSNLKIVNALI 238
Query: 360 DLYSRAGRLEDALNVVENMPMK----------------------------------PNEV 385
DLYS+ G +E A + + + K PN+V
Sbjct: 239 DLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 298
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRR 442
+ S+L AC G I + + Y+ GV + L L +MYA G + A ++
Sbjct: 299 TMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 358
Query: 443 TMKGRGI 449
+M + +
Sbjct: 359 SMLHKSL 365
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/456 (35%), Positives = 263/456 (57%), Gaps = 35/456 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S +S G + F RM T G PN +T ++++S CAD + L G +
Sbjct: 186 VSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGA--LDEGKSL 243
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG+V KLG+ V +L++MY K G +D
Sbjct: 244 HGVVVKLGMS-GKAKVVNSLINMYGKLGFLD----------------------------- 273
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+A ++F+EMPVR +SW +++ GY E+ ++ F M+ +G+ PD T++++L A
Sbjct: 274 --AASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRA 331
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C + G IH Y+ + F ++ + L++LY++ G + + +F+ + R ++W
Sbjct: 332 CTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAW 391
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+++ G+AV+ EA++ F+ M KEG + D V+FT L+ACSH+GL+E+G +YF+IM +
Sbjct: 392 TAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSE 451
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+YRV PR++HY C+VDL R+GRLEDA ++++MPM+P+ V G+LL ACR G++ L +
Sbjct: 452 VYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGK 511
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ + L+ LDP NY++L+N+Y+A G W A K+R MK R + + PG S IE G+ I
Sbjct: 512 EVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKI 571
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
H F+ GD+ H S+ I++ LE L ++ G P+T
Sbjct: 572 HRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKT 607
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 158/294 (53%), Gaps = 9/294 (3%)
Query: 140 VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
V ++ F + ++ Y + G E A R+FDEMP +D +SW +L++G RGY
Sbjct: 145 VIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGAC 204
Query: 200 LECFREMQI-SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
L F M+ SG +P+ VT++SV++ACA++G L G +H V+K KV N+LI+
Sbjct: 205 LNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLIN 264
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
+Y + G ++ A Q+F+ M R+LVSWNS++V NG+ + ++ FN M++ G PD +
Sbjct: 265 MYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQAT 324
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRV--SPRIEHYGCIVDLYSRAGRLEDALNVVE 376
L AC+ GL G + I I+R + I +++LY++ GRL + ++ E
Sbjct: 325 MVALLRACTDTGL---GRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFE 381
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
+ + + + ++LA A +L +V GV+ ++V ++ +A
Sbjct: 382 EIKDR-DRIAWTAMLAGYAVHACGREAIKLFDLMV--KEGVEVDHVTFTHLLSA 432
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 154/348 (44%), Gaps = 53/348 (15%)
Query: 139 VVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE 198
+VF+ + + WN+++ +R G S R F A T L+ KR +
Sbjct: 53 IVFNQQLTRLAVPWNSIVSP-VRCGTSISHNRSF-------AFRHTDLIPKQFKRFNTNK 104
Query: 199 ALECFREM-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
FRE Q V +++ +++C +V IH V+K + + + L+
Sbjct: 105 GCCIFREASQFIVVYSIVQSLVFAISSCTSVSYCSA---IHARVIKSLNYSDGFIGDRLV 161
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE-GFKPDG 316
+Y + G E A+++F M + LVSWNS++ G + G++G L F M+ E G +P+
Sbjct: 162 SMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNE 221
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
V+ ++AC+ G +++G ++ K+ +S + + ++++Y + G L+ A + E
Sbjct: 222 VTLLSVVSACADMGALDEGKSLHGVVVKL-GMSGKAKVVNSLINMYGKLGFLDAASQLFE 280
Query: 377 NMPMK----------------------------------PNEVVLGSLLAACRTKGDIIL 402
MP++ P++ + +LL AC G
Sbjct: 281 EMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQ 340
Query: 403 AERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGR 447
AE + Y+ G +++ ++ L N+YA +G+ + + I +K R
Sbjct: 341 AESIHAYIHRC--GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR 386
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD--FPSQCLF 99
V V W S + H +G + F M G NP+ T + LL C D Q
Sbjct: 284 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 343
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+ A IH C D +++ TALL++YAK GR++ + +F+ ++ + W AM+ GY
Sbjct: 344 IHAYIHR--CGFNAD---IIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGY 398
Query: 160 MRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREM-QISGVEP 213
A+++FD M D +++T LL+ G EE + F M ++ VEP
Sbjct: 399 AVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEP 457
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 258/450 (57%), Gaps = 34/450 (7%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
++ IS + +G EA F + G PN + ++L CA + + LG +H
Sbjct: 418 STMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAA--MKLGQELHSYA 475
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
K + V +AL+DMYAK GR+DL+ +
Sbjct: 476 LKNAYE-GRCYVESALMDMYAKCGRLDLSHYI---------------------------- 506
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
F ++ +D ++W ++++ F + G EEAL FREM + GV+ VTI SVL+ACA++
Sbjct: 507 ---FSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASL 563
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
+ G IH V+K + ++ + LID+Y +CG +E+A +VF+ M ++ VSWNSII
Sbjct: 564 PAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSII 623
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
+ G V E++ MQ+EGFK D V+F ++AC+HAG +++GLR F M + Y++
Sbjct: 624 ASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQI 683
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
+PR+EH+ C+VDLYSRAG+L+ A+ ++ +MP KP+ + G+LL ACR ++ LAE +
Sbjct: 684 APRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQ 743
Query: 409 YLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFM 468
L LDP YVL++N+ A G+WDG K+RR MK +QK PG S +++ + H F+
Sbjct: 744 ELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFV 803
Query: 469 AGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
A D+SH +SE IY L+ + +L+ GY+P
Sbjct: 804 AADKSHPDSEDIYMSLKSILLELREEGYIP 833
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 190/400 (47%), Gaps = 41/400 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W IS ++G + +A L F M G P+ +T ++LL D G +H
Sbjct: 314 VTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNG--FNQGKELH 371
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G + RN V MD+ F +A++D Y + +
Sbjct: 372 GYIV-----RNCV--------------HMDV-------------FLVSALVDIYFKCRAV 399
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A ++D D + + +++G+V G +EA++ FR + G+ P+ V I SVL AC
Sbjct: 400 RMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ + +G +H Y LK ++ V + L+D+Y++CG ++ + +F ++ + V+WN
Sbjct: 460 ASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWN 519
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S+I FA NG EAL F M EG K V+ + L+AC+ I G ++ K
Sbjct: 520 SMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIK- 578
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ + ++D+Y + G LE A V E+MP K NEV S++A+ G + +
Sbjct: 579 GPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEK-NEVSWNSIIASYGAYGLVKESVS 637
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
L++++ + G +++V + +A AG+++ ++
Sbjct: 638 LLRHMQ--EEGFKADHVTFLALVSACAH---AGQVQEGLR 672
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 193/441 (43%), Gaps = 70/441 (15%)
Query: 31 ISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNP--NHITFITLLS 88
+++ ++ + + W I +G A L + +M H + P + TF ++
Sbjct: 95 VAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVK 154
Query: 89 GCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS 148
CA + + LG ++H LGLD ++ VG+AL+ MYA G +++DA +V
Sbjct: 155 SCAALGA--IALGRLVHRTARTLGLD-GDMFVGSALIKMYANGG------LLWDARQV-- 203
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
FD M RD + W +++G+VK G A+E F +M+
Sbjct: 204 -----------------------FDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRA 240
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
SG EP++ T+ L+ A L G+ +H +K + V V NTL+ +Y++C C++
Sbjct: 241 SGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDD 300
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA--- 325
++F M + LV+WN +I G NGFV +AL F MQK G +PD V+ L A
Sbjct: 301 GWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTD 360
Query: 326 -----------------CSHAGL--------IEDGLRYFDIMKKIYRVSPRIEHY--GCI 358
C H + I R + + +Y S I+ +
Sbjct: 361 LNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTM 420
Query: 359 VDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKY-LVDLD 414
+ Y G ++A+ + + ++PN V + S+L AC + + L + L Y L +
Sbjct: 421 ISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAY 480
Query: 415 PGVDSNYVLLANMYAAVGKWD 435
G L +MYA G+ D
Sbjct: 481 EGRCYVESALMDMYAKCGRLD 501
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 168/355 (47%), Gaps = 38/355 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + + ++G ++ A F M G PN T LS A LF G +H
Sbjct: 213 VLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSAT--ESDLFFGVQLH 270
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L K GL+ + V V L+ MYAK +D DG+
Sbjct: 271 TLAVKYGLE-SEVAVANTLVSMYAKCKCLD---------------------DGW------ 302
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
++F MP D ++W +++G V+ G+ ++AL F +MQ SG+ PD VT++S+L A
Sbjct: 303 ----KLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPAL 358
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++ G +H Y+++ +V + + L+D+Y +C + A+ V+ +V +
Sbjct: 359 TDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGS 418
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKK 344
++I G+ +NG EA++ F + ++G +P+ V+ L AC+ ++ G +K
Sbjct: 419 TMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKN 478
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
Y +E ++D+Y++ GRL+ + + + K +EV S++++ G+
Sbjct: 479 AYEGRCYVE--SALMDMYAKCGRLDLSHYIFSKISAK-DEVTWNSMISSFAQNGE 530
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 147/357 (41%), Gaps = 38/357 (10%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
+ +L GC PS L LG +HG GL + + T L+ MY R A VF
Sbjct: 42 LLAVLRGCVS-PSH-LSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFS 99
Query: 143 AM---RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
++ + WN +I G GD SA+ + +M W
Sbjct: 100 SLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKM-------WA--------------- 137
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL 259
S PD T V+ +CA +G + +G +HR ++ V + LI +
Sbjct: 138 -------HPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKM 190
Query: 260 YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
Y+ G + ARQVF M +R V WN ++ G+ G V A+E F M+ G +P+ +
Sbjct: 191 YANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATL 250
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
L+ + + G++ + K Y + + +V +Y++ L+D + MP
Sbjct: 251 ACFLSVSATESDLFFGVQLHTLAVK-YGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP 309
Query: 380 MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDG 436
+ + V +++ C G + + L+ + G+ + V L ++ A+ +G
Sbjct: 310 -RDDLVTWNGMISGCVQNG--FVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNG 363
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/457 (37%), Positives = 259/457 (56%), Gaps = 41/457 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V WT+ IS + + ++ + ALEF + L G PN T+ ++L C LF
Sbjct: 31 VVSWTTMISAY-SAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRAC-----DGLFNLRQ 84
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H + K+GLD + F +A+ID Y R G
Sbjct: 85 LHCCIIKIGLDSD--------------------------------VFVRSALIDVYSRWG 112
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
++E+A+R+FDEM D + W++++ GF + +EAL F+ M+ +G T+ SVL
Sbjct: 113 ELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLR 172
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
AC + L +G +H +VLK D ++ + N L+D+Y +CG +E A VF RM ++ ++S
Sbjct: 173 ACTGLALLELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVIS 230
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W+++I G A NG+ EAL+ F SM+ G KP+ V+ G L ACSHAGL+E+GL YF MK
Sbjct: 231 WSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMK 290
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+++ + P EHYGC++DL RAGRL +A++++ M +P+ V +LL ACR ++ +A
Sbjct: 291 ELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVA 350
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
K ++ LDP YVLL+N+YA +W+ ++RRTM RGI+K+PG S IE+
Sbjct: 351 IHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQ 410
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IH F+ GDRSH + I L L + L GYVP+T
Sbjct: 411 IHAFILGDRSHPQIREINIQLNQLIYKLMGVGYVPDT 447
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 142/306 (46%), Gaps = 47/306 (15%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F N +I+ Y++ G + A +FD+MP R+ +SWT +++ + ++ALE M
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
GV P+ T SVL AC + L +H ++K +V V + LID+YSR G +E A
Sbjct: 61 GVRPNMFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
+VF M LV W+SII GFA N EAL F M++ GF + T L AC+
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED------------------- 370
L+E G + + + + + ++D+Y + G LED
Sbjct: 178 ALLELGRQ---VHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTM 234
Query: 371 ------------ALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERL-----MKYL 410
AL + E+M +KPN V + +L AC G ++ E L MK L
Sbjct: 235 IAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAG--LVEEGLYYFHSMKEL 292
Query: 411 VDLDPG 416
+DPG
Sbjct: 293 FGIDPG 298
>gi|317106614|dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 162/430 (37%), Positives = 253/430 (58%), Gaps = 18/430 (4%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+H F LL C SQ + H + + G N+ + +L+ Y +++LA
Sbjct: 9 PDHQLFCDLLEACK--LSQDIRTATETHTRIIRFGYGTNSS-IAASLISTYVNCNQLNLA 65
Query: 138 TVVFDAMRVKSSFTW-------NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
V ++ F+W N +ID +MR G+ E A ++F +MP RD ++W +++ G+
Sbjct: 66 YQV-----IRQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGY 120
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
V+ G FEEAL F+ M S VEPD T SV+ ACA +G L W+H ++++ + N
Sbjct: 121 VRNGKFEEALRSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEVNF 180
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
+ + LID+YS+CG IE A++VF+ + + + WNS+I G AV+G +A+ F+ M+ E
Sbjct: 181 ILSSALIDMYSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAE 240
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
PD ++F G L ACSH GL+++G +YFD+M+ Y + P++EHYG +VDL RAG L++
Sbjct: 241 NVLPDSLTFLGILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDE 300
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
A ++ MPM+P+ +V LL+ACRT + L E + + G +YVLL+N+Y +
Sbjct: 301 AYAMITAMPMEPDVIVWRILLSACRTHRNTELGEVAVANISGPKSG---DYVLLSNIYCS 357
Query: 431 VGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFD 490
+WD A ++R MK G++K+ G S E +H F AGD+SH E+E +Y +LE L
Sbjct: 358 QNRWDNAQEVREMMKEEGVRKRRGKSWFEWEDVVHRFRAGDKSHPETEALYKILEGLIQR 417
Query: 491 LKLCGYVPET 500
KL G+VP T
Sbjct: 418 TKLEGFVPST 427
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 41/236 (17%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I + R+G+ EA F M P+ TF ++++ CA + L +
Sbjct: 110 VVTWNSMIGGYVRNGKFEEALRSFQAMLSSNVEPDKFTFASVITACARLGA--LNHAQWL 167
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H L+ + ++ N ++ +AL+DMY+K GR++ A VF+++ WN++I
Sbjct: 168 HDLMVQKRIEVNFIL-SSALIDMYSKCGRIETAKEVFESVERNDVSVWNSLI-------- 218
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
NG G +A+ F +M+ V PD +T + +L A
Sbjct: 219 -----------------------NGLAVHGLALDAMMVFSKMEAENVLPDSLTFLGILKA 255
Query: 225 CANVGTLGIGLWIHRYV-LKQDF---KDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
C++ G + G +Y L +++ K ++ ++DL R G ++ A + M
Sbjct: 256 CSHCGLVKEG---RKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMITAM 308
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/456 (35%), Positives = 263/456 (57%), Gaps = 35/456 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S +S G + F RM T G PN +T ++++S CAD + L G +
Sbjct: 129 VSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGA--LDEGKSL 186
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG+V KLG+ V +L++MY K G +D
Sbjct: 187 HGVVVKLGMS-GKAKVVNSLINMYGKLGFLD----------------------------- 216
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+A ++F+EMPVR +SW +++ GY E+ ++ F M+ +G+ PD T++++L A
Sbjct: 217 --AASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRA 274
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C + G IH Y+ + F ++ + L++LY++ G + + +F+ + R ++W
Sbjct: 275 CTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAW 334
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+++ G+AV+ EA++ F+ M KEG + D V+FT L+ACSH+GL+E+G +YF+IM +
Sbjct: 335 TAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSE 394
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+YRV PR++HY C+VDL R+GRLEDA ++++MPM+P+ V G+LL ACR G++ L +
Sbjct: 395 VYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGK 454
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ + L+ LDP NY++L+N+Y+A G W A K+R MK R + + PG S IE G+ I
Sbjct: 455 EVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKI 514
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
H F+ GD+ H S+ I++ LE L ++ G P+T
Sbjct: 515 HRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKT 550
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 158/294 (53%), Gaps = 9/294 (3%)
Query: 140 VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
V ++ F + ++ Y + G E A R+FDEMP +D +SW +L++G RGY
Sbjct: 88 VIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGAC 147
Query: 200 LECFREMQI-SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
L F M+ SG +P+ VT++SV++ACA++G L G +H V+K KV N+LI+
Sbjct: 148 LNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLIN 207
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
+Y + G ++ A Q+F+ M R+LVSWNS++V NG+ + ++ FN M++ G PD +
Sbjct: 208 MYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQAT 267
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRV--SPRIEHYGCIVDLYSRAGRLEDALNVVE 376
L AC+ GL G + I I+R + I +++LY++ GRL + ++ E
Sbjct: 268 MVALLRACTDTGL---GRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFE 324
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
+ + + + ++LA A +L +V GV+ ++V ++ +A
Sbjct: 325 EIKDR-DRIAWTAMLAGYAVHACGREAIKLFDLMV--KEGVEVDHVTFTHLLSA 375
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD--FPSQCLF 99
V V W S + H +G + F M G NP+ T + LL C D Q
Sbjct: 227 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 286
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+ A IH C D +++ TALL++YAK GR++ + +F+ ++ + W AM+ GY
Sbjct: 287 IHAYIHR--CGFNAD---IIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGY 341
Query: 160 MRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREM-QISGVEP 213
A+++FD M D +++T LL+ G EE + F M ++ VEP
Sbjct: 342 AVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEP 400
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 126/271 (46%), Gaps = 41/271 (15%)
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
Y + S++ A ++ ++ IH V+K + + + L+ +Y + G E A+++F
Sbjct: 62 YSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFD 121
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE-GFKPDGVSFTGALTACSHAGLIE 333
M + LVSWNS++ G + G++G L F M+ E G +P+ V+ ++AC+ G ++
Sbjct: 122 EMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALD 181
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK------------ 381
+G ++ K+ +S + + ++++Y + G L+ A + E MP++
Sbjct: 182 EGKSLHGVVVKL-GMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIH 240
Query: 382 ----------------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
P++ + +LL AC G AE + Y+ G ++
Sbjct: 241 NHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRC--GFNA 298
Query: 420 NYVL---LANMYAAVGKWDGAGKIRRTMKGR 447
+ ++ L N+YA +G+ + + I +K R
Sbjct: 299 DIIIATALLNLYAKLGRLNASEDIFEEIKDR 329
>gi|91806359|gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 168/471 (35%), Positives = 267/471 (56%), Gaps = 69/471 (14%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM--- 134
P++ TF TL C+ S C++ G +H + + G ++ V T ++DMYAKFG+M
Sbjct: 76 PDNFTFTTLTKSCS--LSMCVYQGLQLHSQIWRFGF-CADMYVSTGVVDMYAKFGKMGCA 132
Query: 135 ----------------------------DLATVVFDAM-RVKSSFTWNAMIDGYMRRGDI 165
DLA+ +FD M VK +NAM+DG+++ GD+
Sbjct: 133 RNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDM 192
Query: 166 ESAVRMFDEM-------------------------------PVRDAISWTALLNGFVKRG 194
SA R+FDEM P R+ +SW ++ G+ +
Sbjct: 193 TSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNK 252
Query: 195 YFEEALECFREMQ-ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
+E + F+EMQ + ++PD VTI+SVL A ++ G L +G W H +V ++ VKVC
Sbjct: 253 QPQEGITLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVC 312
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
++D+YS+CG IE A+++F M ++ + SWN++I G+A+NG AL+ F +M E K
Sbjct: 313 TAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-K 371
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
PD ++ +TAC+H GL+E+G ++F +M+++ ++ +IEHYGC+VDL RAG L++A +
Sbjct: 372 PDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAED 430
Query: 374 VVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGK 433
++ NMP +PN ++L S L+AC DI AER++K V+L+P D NYVLL N+YAA +
Sbjct: 431 LITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKR 490
Query: 434 WDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
WD G ++ M+ +K+ G S IEI + EF++GD +H I+ +L
Sbjct: 491 WDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVL 541
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 84/170 (49%), Gaps = 8/170 (4%)
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF-QRMHKRTLVSWNSIIVGFAVNGFVGE 299
+L+ + NV++ + + + I +AR++F QR + NS+I + +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 300 ALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC- 357
+ + ++KE F PD +FT +CS + + GL+ + +I+R + Y
Sbjct: 61 SFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQ---LHSQIWRFGFCADMYVST 117
Query: 358 -IVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+VD+Y++ G++ A N + MP + +EV +L++ G++ LA +L
Sbjct: 118 GVVDMYAKFGKMGCARNAFDEMPHR-SEVSWTALISGYIRCGELDLASKL 166
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 264/465 (56%), Gaps = 11/465 (2%)
Query: 43 NP-TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL- 100
NP + W +I + +S ++ + F +M T + +L S+ FL
Sbjct: 586 NPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASI---SELGFLN 642
Query: 101 -GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
G HG V + G D +V VGT+L+DMY K + A VFD M+ ++ F WN+++ GY
Sbjct: 643 MGKETHGYVLRNGFD-CDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGY 701
Query: 160 MRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
+G E A+R+ ++M D ++W +++G+ G +EAL F +MQ GV P+
Sbjct: 702 SFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNS 761
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
+I +L ACA++ L G IH ++ F ++V V LID+YS+ ++ A +VF+R
Sbjct: 762 ASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRR 821
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+ +TL SWN +I+GFA+ G EA+ FN MQK G PD ++FT L+AC ++GLI +G
Sbjct: 822 IQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEG 881
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
+YFD M YR+ PR+EHY C+VDL RAG L++A +++ MP+KP+ + G+LL +CR
Sbjct: 882 WKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCR 941
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
++ AE K L L+P +NY+L+ N+Y+ +W+ +R M G++ +
Sbjct: 942 IHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVW 1001
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
S I+I +H F + ++ H ++ IY L L ++K GYVP+
Sbjct: 1002 SWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDV 1046
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 33/248 (13%)
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
++LG IHG + K G D +V + AL++ Y + ++ A VF M + WN I
Sbjct: 539 IWLGMEIHGCLIKRGFDL-DVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAI- 596
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
+LN ++ ++ +E FR+MQ S ++ + T
Sbjct: 597 ----------------------------ILN--LQSEKLQKGVELFRKMQFSFLKAETAT 626
Query: 218 IISVLNAC-ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
I+ VL A + +G L +G H YVL+ F +V V +LID+Y + + A+ VF M
Sbjct: 627 IVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNM 686
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
R + +WNS++ G++ G +AL N M+KEG KPD V++ G ++ + G ++ L
Sbjct: 687 KNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEAL 746
Query: 337 RYFDIMKK 344
+F M++
Sbjct: 747 AFFAQMQQ 754
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 124/307 (40%), Gaps = 17/307 (5%)
Query: 143 AMRVKSSFTWNA------MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR-GY 195
A +K WN +I Y+ GD SA +F R+ + W + + F G
Sbjct: 444 AQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGS 503
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
LE F+E+ GV D L C V + +G+ IH ++K+ F +V +
Sbjct: 504 LHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCA 563
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
L++ Y RC +E A QVF M + WN I+ + + + +E F MQ K +
Sbjct: 564 LMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAE 623
Query: 316 GVSFTGALTAC-SHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDAL 372
+ L A S G + G + + R + Y ++D+Y + L A
Sbjct: 624 TATIVRVLQASISELGFLNMGK---ETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQ 680
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
V +NM + N SL++ KG A RL+ + G+ + V M +
Sbjct: 681 AVFDNMKNR-NIFAWNSLVSGYSFKGMFEDALRLLNQME--KEGIKPDLVTWNGMISGYA 737
Query: 433 KWDGAGK 439
W G GK
Sbjct: 738 MW-GCGK 743
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/437 (39%), Positives = 251/437 (57%), Gaps = 31/437 (7%)
Query: 64 AALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTA 123
AA F M PN TF LL CA P +G H K G ++ V
Sbjct: 119 AAAFFPLMLRAAVAPNKFTFPFLLKSCAALPGSP-DVGLQAHAAALKFGFAADH-YVSNT 176
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
L+ MY+ FG G++ GD A +F+ MP A++W
Sbjct: 177 LIHMYSCFG------------------------AGFL--GD---ARNVFERMPRESAVTW 207
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
+A++ G+V+ G +A+ FR MQ+SGV PD VT+I VL A A++G L + W+ R+V +
Sbjct: 208 SAMIGGYVRAGLSSDAVVLFRGMQVSGVRPDEVTVIGVLAAAADLGALELTRWVGRFVER 267
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
+ +V +CN LID ++CG ++ A VF+ M +RT+VSW S+I A+ G EA+
Sbjct: 268 EGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMEERTVVSWTSVIDALAMEGRGKEAVGV 327
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F M+ G PD V+F G LTACSHAG++++G YFD MK Y + P+IEHYGC+VD++
Sbjct: 328 FEEMKAVGVLPDDVAFIGVLTACSHAGMVDEGRGYFDSMKTEYGIEPKIEHYGCMVDMFG 387
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
RAG +E L V MPMKPN ++ +L+AACR G + L E + + L++ P ++NYV+
Sbjct: 388 RAGMVEQGLEFVRAMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLNEFPAHEANYVM 447
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSM 483
L+N+YA +W +IRR M RGI+K PG S +E+ +HEF+AGD SH + + IY M
Sbjct: 448 LSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQYKEIYRM 507
Query: 484 LELLSFDLKLCGYVPET 500
+E +S +L+ G++ T
Sbjct: 508 VEEMSRELRRIGHIAAT 524
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 36/253 (14%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I + R+G ++A + F M + G P+ +T I +L+ AD L L +
Sbjct: 204 AVTWSAMIGGYVRAGLSSDAVVLFRGMQVSGVRPDEVTVIGVLAAAAD--LGALELTRWV 261
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
V + G+ ++ V + AL+D AK G +D A VF+ M ++ +W ++ID G
Sbjct: 262 GRFVEREGIGKS-VTLCNALIDTLAKCGDVDGAVAVFEGMEERTVVSWTSVIDALAMEG- 319
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
RG +EA+ F EM+ GV PD V I VL A
Sbjct: 320 ----------------------------RG--KEAVGVFEEMKAVGVLPDDVAFIGVLTA 349
Query: 225 CANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLV 282
C++ G + G + + + ++ ++D++ R G +E + + M K +
Sbjct: 350 CSHAGMVDEGRGYFDSMKTEYGIEPKIEHYGCMVDMFGRAGMVEQGLEFVRAMPMKPNPI 409
Query: 283 SWNSIIVGFAVNG 295
W +++ +G
Sbjct: 410 IWRTLVAACRAHG 422
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 159/459 (34%), Positives = 268/459 (58%), Gaps = 37/459 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S +S + + G EA F R+ G P+ ++ +++L C + L LG +
Sbjct: 184 VSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGD--LELGRWV 241
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
G V + G+ + N +G+AL+ MY+ + G+
Sbjct: 242 EGFVVERGM-KVNSYIGSALISMYS-------------------------------KCGE 269
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ S+ R+FD MP RD I+W A ++ + + G +EA+ F M+ +GV+P+ VT+ +VL+A
Sbjct: 270 LVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSA 329
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L +G + Y + + ++ V LID+Y++CG +E A++VF M ++ SW
Sbjct: 330 CASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASW 389
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEG--FKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
N++I A +G EAL F M EG +P+ ++F L+AC HAGL+++G R FD+M
Sbjct: 390 NAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMM 449
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
++ + P+IEHY C+VDL SRAG L +A +V+E MP KP+ V LG+L +AC+ K ++ +
Sbjct: 450 STLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDI 509
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
ER+++ L++LDP NY++ + +Y + WD A ++R M+ G+ K PG S IE+G+
Sbjct: 510 GERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGN 569
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
+ EF++GD ++S + ++++LL +LK GYVP+ V
Sbjct: 570 QLREFLSGDGLTLDSIDVRNIIDLLYEELKKEGYVPKIV 608
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 182/364 (50%), Gaps = 37/364 (10%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ +M +PN+ TF + CA+ + + + H V KLGLD ++
Sbjct: 105 YHQMKTLNISPNNFTFPFVFLACANLEE--IRMARLAHCEVFKLGLDNDH---------- 152
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
T N+M+ Y R G+ A ++FDE+ +D +SW +LL
Sbjct: 153 ----------------------HTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLL 190
Query: 188 NGFVKRGYFEEALECF-REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
+G+ K G+ EA+E F R + SG EPD ++++SVL AC +G L +G W+ +V+++
Sbjct: 191 SGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGM 250
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
K N + + LI +YS+CG + +R++F M R ++WN+ I +A NG EA+ F+S
Sbjct: 251 KVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHS 310
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M++ G P+ V+ T L+AC+ G ++ G + D + I ++D+Y++ G
Sbjct: 311 MKENGVDPNKVTLTAVLSACASIGALDLG-KQMDEYATHRGLQHDIFVATALIDMYAKCG 369
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN 426
LE A V +MP K N+ ++++A + G A L + + D N + +
Sbjct: 370 SLESAQRVFNDMPRK-NDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVS 428
Query: 427 MYAA 430
+ +A
Sbjct: 429 LLSA 432
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 135/285 (47%), Gaps = 45/285 (15%)
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL 259
L + +M+ + P+ T V ACAN+ + + H V K ++ N+++ +
Sbjct: 102 LHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTM 161
Query: 260 YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE-GFKPDGVS 318
Y RCG AR+VF + ++ LVSWNS++ G+A GF EA+E F +++E GF+PD +S
Sbjct: 162 YFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMS 221
Query: 319 FTGALTACSHAGLIEDGLRYFD--IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
L AC G +E G R+ + ++++ +V+ I ++ +YS+ G L + + +
Sbjct: 222 LVSVLGACGELGDLELG-RWVEGFVVERGMKVNSYIG--SALISMYSKCGELVSSRRIFD 278
Query: 377 NMPMK----------------------------------PNEVVLGSLLAACRTKGDIIL 402
MP + PN+V L ++L+AC + G + L
Sbjct: 279 GMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDL 338
Query: 403 AERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTM 444
+++ +Y G+ + + L +MYA G + A ++ M
Sbjct: 339 GKQMDEYAT--HRGLQHDIFVATALIDMYAKCGSLESAQRVFNDM 381
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 173/461 (37%), Positives = 257/461 (55%), Gaps = 41/461 (8%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADF-PSQCLFL 100
V V WT+ IS + ++GR A F +M G PNH T+ T+L+ A PSQ
Sbjct: 358 VQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQ---- 413
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
IH LV K + N+ VGTAL D Y+K G
Sbjct: 414 ---IHALVVKTNYE-NSPSVGTALSDSYSKIG---------------------------- 441
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
D A ++F+ + +D ++W+A+L+G+ + G E A++ F ++ GVEP+ T S
Sbjct: 442 ---DANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSS 498
Query: 221 VLNACAN-VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
VLNACA ++ G H +K F + + V + L+ +Y++ G IE A +VF+R R
Sbjct: 499 VLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDR 558
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
LVSWNS+I G+A +G ++L+ F M+ + + DG++F G ++AC+HAGL+ +G RYF
Sbjct: 559 DLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYF 618
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
D+M K Y + P +EHY C+VDLYSRAG LE A++++ MP + +LLAACR +
Sbjct: 619 DLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLN 678
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E + L+ L P + YVLL+N+YA G W K+R+ M + ++K+ G S IE
Sbjct: 679 VQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIE 738
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ + FMAGD SH +S+ IY LE LS LK GY P+T
Sbjct: 739 VKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDT 779
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 201/439 (45%), Gaps = 49/439 (11%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V WTS ++ + ++G +A F++M L G PN TF +L G A + G
Sbjct: 155 VKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLA--ADGAVEKG 212
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H +V K GLD + + VG ++++MY+K + +V DA V
Sbjct: 213 VQVHTMVIKSGLD-STIFVGNSMVNMYSK------SLMVSDAKAV--------------- 250
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
FD M R+A+SW +++ GFV G EA E F M++ GV+ +V
Sbjct: 251 ----------FDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATV 300
Query: 222 LNACANVGTLGIGLWIHRYVLKQ--DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK- 278
+ CAN+ + +H V+K DF N+K L+ YS+C I+ A ++F MH
Sbjct: 301 IKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKT--ALMVAYSKCSEIDDAFKLFCMMHGV 358
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +VSW +II G+ NG A+ F M++EG +P+ +++ LTA +A + +
Sbjct: 359 QNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA--NAAVSPSQIHA 416
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
++K Y SP + + D YS+ G +A + E + K + V ++L+ G
Sbjct: 417 L-VVKTNYENSPSVG--TALSDSYSKIGDANEAAKIFELIDEK-DIVAWSAMLSGYAQMG 472
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
DI A ++ +L GV+ N +++ A + + + K G S+
Sbjct: 473 DIEGAVKI--FLQLAKEGVEPNEFTFSSVLNACAA--PTASVEQGKQFHSCSIKSGFSNA 528
Query: 459 EIGSGIHEFMAGDRSHIES 477
S M R +IES
Sbjct: 529 LCVSSALVTMYAKRGNIES 547
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 152/325 (46%), Gaps = 45/325 (13%)
Query: 154 AMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEP 213
+++D YM+ +E R+FDEM V++ +SWT+LL G+ + G E+AL+ F +MQ+ G++P
Sbjct: 132 SLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKP 191
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
+ T +VL A G + G+ +H V+K + V N+++++YS+ + A+ VF
Sbjct: 192 NPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVF 251
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK-------------------- 313
M R VSWNS+I GF NG EA E F M+ EG K
Sbjct: 252 DSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMS 311
Query: 314 ----------PDGVSF-----TGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCI 358
+G F T + A S I+D + F +M + V + I
Sbjct: 312 FAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVS----WTAI 367
Query: 359 VDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
+ Y + GR + A+N+ M ++PN ++L A + ++K + P
Sbjct: 368 ISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQIHALVVKTNYENSP 427
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKI 440
V + L++ Y+ +G + A KI
Sbjct: 428 SVGT---ALSDSYSKIGDANEAAKI 449
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 115/229 (50%), Gaps = 2/229 (0%)
Query: 170 RMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVG 229
++FDE P + LL F + +EAL F ++ SG D ++ VL C +
Sbjct: 47 QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106
Query: 230 TLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIV 289
+G +H +K F ++V V +L+D+Y + +E +VF M + +VSW S++
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA 166
Query: 290 GFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVS 349
G+ NG +AL+ F+ MQ EG KP+ +F L + G +E G++ ++ K +
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK-SGLD 225
Query: 350 PRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
I +V++YS++ + DA V ++M + N V S++A T G
Sbjct: 226 STIFVGNSMVNMYSKSLMVSDAKAVFDSMENR-NAVSWNSMIAGFVTNG 273
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 167/461 (36%), Positives = 257/461 (55%), Gaps = 38/461 (8%)
Query: 50 SSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSGCADFPSQCLFL-GAMIHGL 107
+S+ R + E AL F M L P+ +F +L CA F C F G IHGL
Sbjct: 79 NSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAF---CGFEEGRQIHGL 135
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
K L +V V L+++Y + G ++A V D M V+ + +WN+++ Y+ +G +E
Sbjct: 136 FMKSDL-VTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLDKGLVEE 194
Query: 168 AVRMFDEM-------------------------------PVRDAISWTALLNGFVKRGYF 196
A +FDEM PV+D +SW A++ + G +
Sbjct: 195 ARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCY 254
Query: 197 EEALECFREMQISGVE-PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
E LE F M E PD T+++VL+ACA++G+L G W+H Y+ K + V
Sbjct: 255 NEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATA 314
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
L+D+YS+CG I+ A +VF+ KR + +WNSII G +V+G +ALE F+ M EGFKP+
Sbjct: 315 LVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPN 374
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
G++F G L+AC+H GL++ + F++M +Y + P IEHYGC+VDL R G+ E+A +V
Sbjct: 375 GITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELV 434
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
+P ++L SLL AC+ G + AER+ L++ +P S YV ++N+YA+ G+WD
Sbjct: 435 NEVPADEASILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQMSNLYASHGRWD 494
Query: 436 GAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIE 476
A ++R M+ ++K PG S IE+ +HEF+AG+ IE
Sbjct: 495 EAMEVRGKMRAERVKKNPGCSMIEVDGVVHEFLAGEGLRIE 535
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
E AL FREM + V PD + VL ACA G IH +K D +V V NTL
Sbjct: 92 EIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFMKSDLVTDVFVENTL 151
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
I++Y R G E AR+V RM R VSWNS++ + G V EA F+ M++ +
Sbjct: 152 INVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLDKGLVEEARALFDEMEERNVE--- 208
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV-- 374
S+ ++ + AGL+++ FD M VS + +V Y+ G + L V
Sbjct: 209 -SWNFMISGYAAAGLVKEAREVFDSMPVKDVVS-----WNAMVTAYAHVGCYNEVLEVFN 262
Query: 375 --VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL----VDLDPGVDSNYVLLANMY 428
+++ +P+ L ++L+AC + G + E + Y+ ++++ V + L +MY
Sbjct: 263 MMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVAT---ALVDMY 319
Query: 429 AAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIY 481
+ GK D A ++ R R + +SI G +H + D I SE +Y
Sbjct: 320 SKCGKIDKALEVFRDTSKRDVST---WNSIITGLSVHG-LGKDALEIFSEMVY 368
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+ +A + R+ + NS+I +A + AL F M PD SFT L A
Sbjct: 60 VSYAHSILNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKA 119
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
C+ E+G + + K V+ ++++Y R+G E A V++ MP++ + V
Sbjct: 120 CAAFCGFEEGRQIHGLFMKSDLVTDVFVE-NTLINVYGRSGYFEIARKVLDRMPVR-DAV 177
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
SLL+A KG L E +++ ++ + + YAA G A ++ +M
Sbjct: 178 SWNSLLSAYLDKG---LVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMP 234
Query: 446 GRGI 449
+ +
Sbjct: 235 VKDV 238
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC--ADFPSQCLFLGAMIH 105
W S I+ G +A F+ M G PN ITFI +LS C Q L M++
Sbjct: 343 WNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMN 402
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRV-KSSFTWNAMIDGYMRRGD 164
+ G++ G ++D+ + G+ + A + + + ++S +++ R G
Sbjct: 403 SV---YGIEPTIEHYG-CMVDLLGRMGKFEEAEELVNEVPADEASILLESLLGACKRFGK 458
Query: 165 IESAVRMFD---EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+E A R+ + E R++ + + N + G ++EA+E +M+ V+ +
Sbjct: 459 LEQAERIANRLLESNPRESSGYVQMSNLYASHGRWDEAMEVRGKMRAERVKKN 511
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 162/455 (35%), Positives = 265/455 (58%), Gaps = 34/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + IS + ++G +A + M P+ T ++L A++ + L G IH
Sbjct: 202 VSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVN--LLKGKEIH 259
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G + G D + V +G++L+DMYAK R+D
Sbjct: 260 GYAIRNGYDAD-VFIGSSLIDMYAKCTRVD------------------------------ 288
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ R+F +P D ISW +++ G V+ G F+E L+ F++M I+ ++P++V+ S++ AC
Sbjct: 289 -DSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPAC 347
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ TL +G +H Y+++ F NV + + L+D+Y++CG I AR +F +M +VSW
Sbjct: 348 AHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWT 407
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I+G+A++G +A+ F M+ EG KP+ V+F LTACSHAGL+++ +YF+ M +
Sbjct: 408 AMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQD 467
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
YR+ P +EHY + DL R GRLE+A + +M ++P V +LLAACR +I LAE+
Sbjct: 468 YRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEK 527
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ K L +DP YVLL+N+Y+A G+W A K+R M+ +G++KKP S IEI + +H
Sbjct: 528 VSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVH 587
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F+AGD+SH + I L++L ++ GYV +T
Sbjct: 588 AFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDT 622
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 197/444 (44%), Gaps = 56/444 (12%)
Query: 37 NSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQ 96
NS + T+ W S I + G + F +M G P+H F ++L C
Sbjct: 63 NSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKD- 121
Query: 97 CLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATV---VFDAMRVKSSFTWN 153
L G +HG + +LG+ + + AL++MY+KF ++ VFD + ++
Sbjct: 122 -LRFGESVHGCIIRLGMGFD-LYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKK 179
Query: 154 AMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEP 213
Y+ S ++F+ MP RD +SW +++G + G E+AL REM + + P
Sbjct: 180 EKESYYL-----GSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRP 234
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
D T+ SVL A L G IH Y ++ + +V + ++LID+Y++C ++ + +VF
Sbjct: 235 DSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVF 294
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
+ + +SWNSII G NG E L++F M KP+ VSF+ + AC+H +
Sbjct: 295 YMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLH 354
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM------------- 380
G + + + R + +VD+Y++ G + A + + M +
Sbjct: 355 LGKQLHGYIIR-SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGY 413
Query: 381 ---------------------KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD----- 414
KPN V ++L AC G L + KY +
Sbjct: 414 ALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAG---LVDEAWKYFNSMTQDYRI 470
Query: 415 -PGVDSNYVLLANMYAAVGKWDGA 437
PG++ +Y +A++ VG+ + A
Sbjct: 471 IPGLE-HYAAVADLLGRVGRLEEA 493
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 169/462 (36%), Positives = 256/462 (55%), Gaps = 35/462 (7%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K V WT IS + +SG+ +EA F +M G PN T +LL PS
Sbjct: 165 KMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSD-- 222
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G +H K G D N V VG++LLDMYA++ M A V+
Sbjct: 223 HHGRQLHAFSLKYGYDMN-VHVGSSLLDMYARWAHMREAKVI------------------ 263
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
F+ + ++ +SW AL+ G ++G E + F +M G EP + T
Sbjct: 264 -------------FNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTY 310
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
SV ACA+ G+L G W+H +V+K + + NTLID+Y++ G I+ A++VF+R+ K
Sbjct: 311 SSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVK 370
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +VSWNSII G+A +G EAL+ F M K +P+ ++F LTACSH+GL+++G Y
Sbjct: 371 QDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYY 430
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F++MKK +++ ++ H+ +VDL RAGRL +A +E MP+KP V G+LL +CR
Sbjct: 431 FELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHK 489
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ L + + +LDP +VLL+N+YA+ G+ A K+R+ MK G++K+P S +
Sbjct: 490 NMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWV 549
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
EI + +H F+A D SH E I M E +S +K GYVP+T
Sbjct: 550 EIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDT 591
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 138/279 (49%), Gaps = 33/279 (11%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N +++ Y + G +E A +FD+MP +D +SWT L++G+ + G EAL F +M G +
Sbjct: 144 NFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ 203
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P+ T+ S+L A + G +H + LK + NV V ++L+D+Y+R + A+ +
Sbjct: 204 PNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVI 263
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F + + +VSWN++I G A G + F M ++GF+P +++ TAC+ +G +
Sbjct: 264 FNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSL 323
Query: 333 EDG--------------LRY--------------FDIMKKIYR--VSPRIEHYGCIVDLY 362
E G + Y KK++R V I + I+ Y
Sbjct: 324 EQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGY 383
Query: 363 SRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKG 398
++ G +AL + E M ++PNE+ S+L AC G
Sbjct: 384 AQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSG 422
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 14/240 (5%)
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
+EP+ +LN C + L G IH ++ F+D++ + N ++++Y++CG +E A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
+F +M + +VSW +I G++ +G EAL F M GF+P+ + + L A S G
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA-SGTG 219
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
+ R Y + ++D+Y+R + +A V+ N N V +L
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREA-KVIFNSLAAKNVVSWNAL 278
Query: 391 LAACRTKGDIILAERLMK-YLVDLDPGVDSNYVLLANMYAAV--------GKWDGAGKIR 441
+A KG+ E +M+ +L L G + + ++++ A GKW A I+
Sbjct: 279 IAGHARKGE---GEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIK 335
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 268/460 (58%), Gaps = 9/460 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTN--PNHITFITLLSGCADFPSQCLFLGAM 103
V W S I+ C AL+F L T+ P+ + + LS CA+ + L G
Sbjct: 205 VSWNSMIAG-CNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANL--EKLSFGKQ 261
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS--SFTWNAMIDGYMR 161
IHG + + D + VG AL+ MYAK G +++A + + + + A+++GY++
Sbjct: 262 IHGYIVRTMFDASGA-VGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVK 320
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
GDI A ++F+ + D ++WTA++ G+V+ G +A+E F+ M G P+ T+ ++
Sbjct: 321 LGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAM 380
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK-RT 280
L+A ++V +L G IH ++ + V N L +Y++ G I AR+VF + + R
Sbjct: 381 LSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRD 440
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
VSW S+I+ A +G EA+E F M G KPD +++ G L+AC+H GL+E G YFD
Sbjct: 441 TVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFD 500
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+MK ++++ P + HY C+VDL+ RAG L++A VENMPM+P+ + GSLL++C+ ++
Sbjct: 501 LMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNV 560
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
LA+ + L+ ++P Y LAN+Y++ GKWD A KIR+ MK RG++K+ GLS ++I
Sbjct: 561 DLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQI 620
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ H F D H + + IY M++ + ++K G+ P+T
Sbjct: 621 QNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDT 660
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 223/477 (46%), Gaps = 81/477 (16%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V +V WT+ I + + GR +A F M P T +L+ CA S+ +G
Sbjct: 69 VRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRG--IG 126
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H V KLGL V V +LL+MYAK G + +A VVFD M+++++ +WNAMI +M
Sbjct: 127 KKVHSFVVKLGL-HACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMN 185
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE-MQISGVEPDYVTIIS 220
G ++ A+ F+ + RD +SW +++ G + G+ EAL+ F ++ + ++PD ++ S
Sbjct: 186 CGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLAS 245
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF------------ 268
L+ACAN+ L G IH Y+++ F + V N LI +Y++ G +E
Sbjct: 246 ALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISD 305
Query: 269 ---------------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
ARQ+F + +V+W ++IVG+ NG +A+E F +M
Sbjct: 306 LDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTM 365
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
EG +P+ + L+A S + G + + ++ +SP + + + +Y++AG
Sbjct: 366 VSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--ALTTMYAKAG 423
Query: 367 RL--------------------------------EDALNVVENM---PMKPNEVVLGSLL 391
+ E+A+ + E M +KP+ + +L
Sbjct: 424 SINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVL 483
Query: 392 AACRTKGDIILAER----LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
+AC T G ++ R LMK + +DP + S+Y + +++ G A K M
Sbjct: 484 SAC-THGGLVEQGRSYFDLMKNVHKIDPTL-SHYACMVDLFGRAGLLQEAYKFVENM 538
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 186/341 (54%), Gaps = 37/341 (10%)
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ KLGL + V + L+++YAK G A +F+ M VK++F+WN ++ GY ++G +E
Sbjct: 1 MVKLGLTFS-VYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEK 59
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++FD +PVRD++SWT ++ G+ + G FE+A++ F +M V P T+ +VL +CA
Sbjct: 60 AHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAA 119
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH---------- 277
G+ GIG +H +V+K V V N+L+++Y++ G ++ A+ VF RM
Sbjct: 120 TGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAM 179
Query: 278 ---------------------KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE-GFKPD 315
+R +VSWNS+I G +GF EAL++F+S+ K+ KPD
Sbjct: 180 ISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPD 239
Query: 316 GVSFTGALTACSHAGLIEDGLRYFD-IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
S AL+AC++ + G + I++ ++ S + + ++ +Y+++G +E A +
Sbjct: 240 RFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGN--ALISMYAKSGGVEIARRI 297
Query: 375 VENMPMKPNEVV-LGSLLAACRTKGDIILAERLMKYLVDLD 414
+E + +V+ +LL GDI A ++ L D D
Sbjct: 298 IEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPD 338
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 34/145 (23%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV WTS I + G EA F +M G P+HIT++ +LS C
Sbjct: 441 TVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACT------------- 487
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG GL V G + D+ ++D + + M+D + R G
Sbjct: 488 HG-----GL----VEQGRSYFDLMKNVHKID-----------PTLSHYACMVDLFGRAGL 527
Query: 165 IESAVRMFDEMPVR-DAISWTALLN 188
++ A + + MP+ D I+W +LL+
Sbjct: 528 LQEAYKFVENMPMEPDVIAWGSLLS 552
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 275/459 (59%), Gaps = 7/459 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S IS + + G EA F++M + P++ T ++LS CA+ + L +G I
Sbjct: 240 VSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANL--EKLNIGKQI 297
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS--SFTWNAMIDGYMRR 162
H + + + + VG AL+ MYAK G +++A ++ + R + + +++DGY +
Sbjct: 298 HAYILRAETETSGA-VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKL 356
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G+++ A +F+++ RD ++WTA++ G+V+ G + +ALE FR M G EP+ T+ ++L
Sbjct: 357 GNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAML 416
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTL 281
+ +++ L G IH +K V N LI +Y++ G I A++VF + K+ +
Sbjct: 417 SVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEI 476
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSW S+I+ A +G EA+ F M G KPD +++ G L+AC+H GL+E G +Y+++
Sbjct: 477 VSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNM 536
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M +++ + P + HY C++DLY RAG L++A +E+MP++P+ + GSLLA+C+ +
Sbjct: 537 MTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNAD 596
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LA+ + L+ +DPG Y+ LAN+Y+A GKW+ A + R+ MK RG++K+ G+S I I
Sbjct: 597 LAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIK 656
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ +H F D H + + IY ++ + ++K G++P+T
Sbjct: 657 NEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDT 695
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 223/460 (48%), Gaps = 79/460 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I + + G A F +M P+ T +LS CA +Q L +G IH
Sbjct: 108 VSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCA--ANQTLDIGRKIH 165
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V KLGL + V V T+LL+MYAK G +A VVFD M VK+ TWNA+I YM+ G
Sbjct: 166 SFVVKLGLG-SCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQF 224
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNA 224
E A F++MP RD +SW ++++G+ ++GY EAL F +M ++PD T+ S+L+A
Sbjct: 225 ELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSA 284
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF---------------- 268
CAN+ L IG IH Y+L+ + + + V N LI +Y++ G +E
Sbjct: 285 CANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNII 344
Query: 269 -----------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
AR++F ++ R +V+W ++IVG+ NG +ALE F M EG
Sbjct: 345 AFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEG 404
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL-- 368
+P+ + L+ S ++E G + + +K +P + + ++ +Y++ G +
Sbjct: 405 PEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTN--ALIAMYAKTGNINV 462
Query: 369 ------------------------------EDALNVVENM---PMKPNEVVLGSLLAACR 395
++A+N+ E M MKP+ + +L+AC
Sbjct: 463 AKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACT 522
Query: 396 TKGDIILAER---LMKYLVDLDPGVDSNYVLLANMYAAVG 432
G + + +M + +++P + S+Y + ++Y G
Sbjct: 523 HVGLVEQGRKYYNMMTEVHEIEPTL-SHYACMIDLYGRAG 561
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 184/389 (47%), Gaps = 50/389 (12%)
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
F G +H + K GL V + L+ YAK G + A VFD M +KS+F+WN +I G
Sbjct: 27 FAGRSVHCQIIKKGLHLG-VYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISG 85
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y ++G+ E + R+ EMP D +SWTA++ G+ + G F+ A+ F +M V P T+
Sbjct: 86 YAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTV 145
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG-------------- 264
+VL++CA TL IG IH +V+K V V +L+++Y++CG
Sbjct: 146 SNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTV 205
Query: 265 -----------------CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
E A F++M R +VSWNS+I G++ G+ EAL F+ M
Sbjct: 206 KNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKM 265
Query: 308 QKE-GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI--YRVSPRIEHYGCI----VD 360
E KPD + L+AC++ L +I K+I Y + E G + +
Sbjct: 266 LNEPSLKPDNFTLASILSACAN-------LEKLNIGKQIHAYILRAETETSGAVGNALIS 318
Query: 361 LYSRAGRLEDALNVVE-NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
+Y+++G +E A +VE N N + SLL G++ A + L D D
Sbjct: 319 MYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVA-- 376
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
+ + Y G W+ A ++ R M G
Sbjct: 377 -WTAMIVGYVQNGLWNDALELFRLMVNEG 404
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 177/464 (38%), Positives = 259/464 (55%), Gaps = 39/464 (8%)
Query: 41 TVNPTVQ-WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
T NP V +T+ I SG EA ++RM P++ ++L C L
Sbjct: 97 THNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGS--QLALR 154
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
G +H KLG N +V ++++Y K G +
Sbjct: 155 EGREVHSRALKLGFSSNR-LVRLRIMELYGKCGEL------------------------- 188
Query: 160 MRRGDIESAVRMFDEMP----VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
GD A R+F+EMP +D + WTA+++GFV+ ALE FR MQ V P+
Sbjct: 189 ---GD---ARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNE 242
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
TI+ VL+AC+ +G L IG W+H Y+ K + + N+ V N LI++YSRCG I+ A+ VF
Sbjct: 243 FTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDE 302
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M R ++++N++I G ++NG +A+E F M +P V+F G L ACSH GL++ G
Sbjct: 303 MKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFG 362
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
F M + YRV P+IEHYGC+VDL R GRLE+A +++ M M P+ ++LG+LL+AC+
Sbjct: 363 FEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACK 422
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
++ L E++ K L D YVLL+++YA+ GKW A ++R MK G+QK+PG
Sbjct: 423 MHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGC 482
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
SSIE+ + IHEF+ GD H + E IY LE L+ L+L GY PE
Sbjct: 483 SSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPE 526
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 142/322 (44%), Gaps = 43/322 (13%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A R+F + +TAL++GFV G + EA++ + M + PD + S+L A
Sbjct: 87 IDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKA 146
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK----RT 280
C + L G +H LK F N V +++LY +CG + AR+VF+ M + +
Sbjct: 147 CGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKD 206
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
V W ++I GF N ALE F MQ E +P+ + L+ACS G +E G
Sbjct: 207 TVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHS 266
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP--------------------- 379
M+K + + + ++++YSR G +++A V + M
Sbjct: 267 YMRK-FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSR 325
Query: 380 -------------MKPNEVVLGSLLAACRTKGDIILAERLMKYLV---DLDPGVDSNYVL 423
++P V +L AC G + + + ++P ++ +Y
Sbjct: 326 QAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIE-HYGC 384
Query: 424 LANMYAAVGKWDGAGKIRRTMK 445
+ ++ VG+ + A + RTMK
Sbjct: 385 MVDLLGRVGRLEEAYDLIRTMK 406
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 110/277 (39%), Gaps = 47/277 (16%)
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
D IIS+L ++ + L IH +++ + + L+ S+C I++A ++F
Sbjct: 38 DQKQIISLLQRSRHINQV---LPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIF 94
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
Q H + + ++I GF +G EA++ ++ M E PD L AC +
Sbjct: 95 QYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALR 154
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP-------------- 379
+G K+ S R+ I++LY + G L DA V E MP
Sbjct: 155 EGREVHSRALKLGFSSNRLVRLR-IMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAM 213
Query: 380 ------------------------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
++PNE + +L+AC G + + + Y+ +
Sbjct: 214 IDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFE- 272
Query: 416 GVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
++ N + L NMY+ G D A + MK R +
Sbjct: 273 -IELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDV 308
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 242/386 (62%), Gaps = 8/386 (2%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAM--RVKSSFTWNAMIDGYMRRGDIESAVRMFDE 174
+V+ A+L YA+ G + A +FD M ++S TWNAMI YMR GD++SA ++F+
Sbjct: 135 SVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSARKLFNT 194
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNACANVGTLGI 233
MP R+ ++W +++ G+ + G A+E F+EM + PD VT++SV++AC ++G L +
Sbjct: 195 MPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALEL 254
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV 293
G W+ R++ + K ++ N +I +YSRCG +E A++VFQ M R +VS+N++I GFA
Sbjct: 255 GNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAA 314
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE 353
+G EA+ ++M++ G +PD V+F G LTACSHAGL+E+G + F+ +K P I+
Sbjct: 315 HGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAID 369
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
HY C+VDL R G LEDA +E MPM+P+ V GSLL A R + L E L +L
Sbjct: 370 HYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFEL 429
Query: 414 DPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRS 473
+P N++LL+N+YA+ G+W +IR MK G++K G S +E G +H+F+ DRS
Sbjct: 430 EPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRS 489
Query: 474 HIESEHIYSMLELLSFDLKLCGYVPE 499
H S+ IY +L L ++ GY+ +
Sbjct: 490 HERSDDIYQLLIELRKKMREAGYIAD 515
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 189/455 (41%), Gaps = 102/455 (22%)
Query: 62 AEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG 121
A+ L + +M G P+ + L+ G H V KLG ++ V
Sbjct: 12 AKVVLMYEQMQGCGVRPDAFVYPILIKSAGTG-------GIGFHAHVLKLG-HGSDAFVR 63
Query: 122 TALLDMYA--------------KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
A++DMYA K+ A +FD M ++ TW AM+ GY + D+E+
Sbjct: 64 NAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEA 123
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A R FD MP R +SW A+L+G+ + G EEAL F EM L A N
Sbjct: 124 ARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM---------------LGAYRN 168
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
T W N +I Y R G ++ AR++F M R +V+WNS+
Sbjct: 169 SVT-----W-----------------NAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSM 206
Query: 288 IVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
I G+A NG A+E F M + PD V+ ++AC H G +E G + +
Sbjct: 207 IAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTE-N 265
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP--------------------------- 379
++ I + ++ +YSR G +EDA V + M
Sbjct: 266 QIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLM 325
Query: 380 -------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
++P+ V +L AC G +L E + DP +D +Y + ++ VG
Sbjct: 326 STMKEGGIEPDRVTFIGVLTACSHAG--LLEEGRKVFESIKDPAID-HYACMVDLLGRVG 382
Query: 433 KWDGAGKIRRTMKGRGIQKKPGL-SSIEIGSGIHE 466
+ + A +RTM+ ++ G+ S+ S IH+
Sbjct: 383 ELEDA---KRTMERMPMEPHAGVYGSLLNASRIHK 414
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 174/493 (35%), Positives = 276/493 (55%), Gaps = 42/493 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W IS + + ++ +A M + +T ++LS A + + LG
Sbjct: 1444 VVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASA--VTSNIKLGKEG 1501
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDA--------------------- 143
H + L+ ++V+V +++DMYAK R+D A VFD+
Sbjct: 1502 HCYCIRRNLE-SDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGL 1560
Query: 144 ----------MRVKSS----FTWNAMIDGYMRRGDIESAVRMFDEMPV----RDAISWTA 185
M+ S +WN++I G++R G + A MF +M + I+WT
Sbjct: 1561 SGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTT 1620
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
L++G + G+ EA+ F++MQ +G+ P +I SVL AC ++ +L G IH ++ + +
Sbjct: 1621 LISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHE 1680
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
F +V V +L+D+Y++CG I+ A++VF M + L +N++I +A++G EAL F
Sbjct: 1681 FCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFK 1740
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
+QKEG +PD ++FT L+ACSHAGL+ +GL F M + ++P +EHYGC+V L SR
Sbjct: 1741 HLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRC 1800
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLA 425
G L++AL ++ MP +P+ +LGSLL ACR +I L E L K+L L+P NYV L+
Sbjct: 1801 GNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALS 1860
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
N YAA G+W +R MK RG++K PG S I+ G ++ F+AGD SH ++E IY+ML
Sbjct: 1861 NAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLA 1920
Query: 486 LLSFDLKLCGYVP 498
+L +++ GYVP
Sbjct: 1921 MLLSEMRFMGYVP 1933
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 165/351 (47%), Gaps = 57/351 (16%)
Query: 52 ISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKL 111
IS C+ G + E+ + M + LL GC + L G IH + K
Sbjct: 1146 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVY--ERALHTGQQIHARILKN 1203
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
G D +AK ++ VVF A K F E AVR+
Sbjct: 1204 G-------------DFFAKNEYVETKLVVFYA---KCDFP--------------EVAVRL 1233
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTL 231
F + VR+ SW A++ + G+ E+AL F EMQ +GV PD + +VL AC ++ +
Sbjct: 1234 FHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLI 1293
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
G+G +H YVLK F V V ++L+D+Y +CG +E AR+VF M ++ +V+WNS+IVG+
Sbjct: 1294 GLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGY 1353
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLRYFD 340
NG EA++ F M+ EG +P V+ L+A + HA I + L +
Sbjct: 1354 VQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDN 1413
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLL 391
I+ I++ YS+ G +EDA V M K +VV +LL
Sbjct: 1414 ILG------------SSIINFYSKVGLIEDAELVFSRMLEK--DVVTWNLL 1450
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 214/497 (43%), Gaps = 87/497 (17%)
Query: 29 PQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLS 88
P+++++ + + V W + + CR G +A L F M +G P++ +L
Sbjct: 1227 PEVAVRLFH-RLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLK 1285
Query: 89 GCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS 148
C Q + LG +HG V K+G V V ++L+DMY K G ++ A VFD+M K+
Sbjct: 1286 ACGSL--QLIGLGKGVHGYVLKMGFGA-CVFVSSSLVDMYGKCGVLEDARKVFDSMVEKN 1342
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEM------PVR------------------------ 178
TWN+MI GY++ G + A+ +F +M P R
Sbjct: 1343 VVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHA 1402
Query: 179 ---------DAISWTALLNGFVKRGYFEEALECFRE------------------------ 205
D I ++++N + K G E+A F
Sbjct: 1403 IAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGK 1462
Query: 206 -------MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
M+ + D VT+ S+L+A A + +G H Y ++++ + +V V N++ID
Sbjct: 1463 ALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIID 1522
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
+Y++C I+ AR+VF +R LV WN+++ +A G GEAL+ F MQ + P+ +S
Sbjct: 1523 MYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVIS 1582
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+ + G + + F M+ + P + + ++ +++G +A+ + M
Sbjct: 1583 WNSVILGFLRNGQVNEAKDMFSQMQSL-GFQPNLITWTTLISGLAQSGFGYEAILFFQKM 1641
Query: 379 P---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD-----PGVDSNYVLLANMYAA 430
++P+ + S+L AC + + ++ + P S L +MYA
Sbjct: 1642 QEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATS----LVDMYAK 1697
Query: 431 VGKWDGAGKIRRTMKGR 447
G D A K+ M +
Sbjct: 1698 CGSIDEAKKVFHMMSSK 1714
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 249/399 (62%), Gaps = 19/399 (4%)
Query: 63 EAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG 121
+A L F M PN TF ++ C ++ L G +HGL K GLD + +V
Sbjct: 71 DALLVFIEMVEDCSVEPNCFTFPSVFKACGR--AERLREGRQVHGLAVKFGLDSDEFVVS 128
Query: 122 TALLDMYAKFGRMDLATVVF---------DAMRVKSS------FTWNAMIDGYMRRGDIE 166
++ MY G M+ A +F D +R K WN MIDGY+R G++E
Sbjct: 129 N-VVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELE 187
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A +FDEMP R +SW ++ G+ + G+F+EA+E FREMQ++ V P+YVT++SVL A +
Sbjct: 188 VARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMS 247
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+G L +G W+H Y ++ + + + + LID+Y++CG IE A QVF+ + KR +V+W++
Sbjct: 248 RLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWST 307
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
II G A++G + L++F M++ G P V++ G L+ACSHAGL+ +G +FD M ++
Sbjct: 308 IIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVS 367
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+ PRIEHYGC+VDL RAG LE++ ++ NMP+KP++V+ +LL AC+ G++ + +R+
Sbjct: 368 GLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRV 427
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
++L++L P +YV L+N+YA++G W+G K+R MK
Sbjct: 428 AEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMK 466
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 43/225 (19%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W I+ + +SG EA F M + PN++T +++L + LGA+
Sbjct: 201 VVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSR-------LGALE 253
Query: 105 HGLVCKLGLDRNNV----MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G L RNN+ ++G+AL+DMYAK G ++ A VF+ + ++ TW+ +I
Sbjct: 254 LGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTII---- 309
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G G ++ L+ F +M+ +GV P VT I
Sbjct: 310 ---------------------------AGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIG 342
Query: 221 VLNACANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCG 264
+L+AC++ G + G W ++++ + ++ ++DL R G
Sbjct: 343 LLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAG 387
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 97/267 (36%), Gaps = 85/267 (31%)
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE-GFKPDGVSFTGALT 324
+++AR++F+ MH+ S+N++I + + +AL F M ++ +P+ +F
Sbjct: 38 LDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFK 97
Query: 325 ACSHA-----------------------------------GLIEDGLRYF---------- 339
AC A G++ED R F
Sbjct: 98 ACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCD 157
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK------------------ 381
I K RV + + ++D Y R G LE A N+ + MP +
Sbjct: 158 GIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHF 217
Query: 382 ----------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL-- 423
PN V L S+L A G + L + + Y V + GVD VL
Sbjct: 218 KEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDD--VLGS 275
Query: 424 -LANMYAAVGKWDGAGKIRRTMKGRGI 449
L +MYA G + A ++ + R +
Sbjct: 276 ALIDMYAKCGSIEKALQVFEGLPKRNV 302
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 152/409 (37%), Positives = 254/409 (62%), Gaps = 8/409 (1%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDA--MRVKSSFTWNAMIDG 158
G H + GL +++ V +L+ MY+ D A +FD + ++ WNAM+
Sbjct: 129 GLQFHSQAIRFGL-HSHLHVLVSLIRMYSSSHISD-ARKLFDGIPLTARNVALWNAMLTS 186
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + D+ +A +FD MP R+ ISWTAL++G+ +A+ FR MQ+ V PD +T+
Sbjct: 187 YAKICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQNVVPDEITL 246
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
++VL+ACA +G L +G WI Y+ NV + N LID+Y++ G I+ A +F+ M
Sbjct: 247 LAVLSACAQLGALELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRALLIFESMKH 306
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+T+V+W ++I G A++G +ALE F+ M+++ KP+ ++F L+ACSH GL++ +
Sbjct: 307 KTIVTWTTMIAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLARSF 366
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M+ Y + P+IEHYGC++DL RAG L++A +++ MP +PN + GSLLAA T G
Sbjct: 367 FTNMRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHG 426
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
D +L ER +K+L++L+P NY LL+N+YA++G+W + +R+ M+ RG++K PG S I
Sbjct: 427 DAMLGERTLKHLIELEPNNSGNYALLSNIYASLGRWKASRIVRKMMRDRGVKKIPGGSFI 486
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYE 507
E+ + ++EF+AG+ SH + + IY ++ + + + E++ E +E
Sbjct: 487 EVNNRVNEFIAGETSHPQFDEIYEVI----YKINEQSRLSESLEKECFE 531
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 104/235 (44%), Gaps = 12/235 (5%)
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM- 276
+I +LN C+N+ L H ++L + + + + I S G +A +F +
Sbjct: 14 VIWLLNHCSNLKHLH---QTHAFMLCRALDHDNLLLSLFIQSSSSLGFSLYAYSLFTSLT 70
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
H + +N+II +++ ++ FN +Q +PD SF AL A + GL
Sbjct: 71 HPPNIFLYNTIIRALSLSPQPSLSIFLFNRIQSARLRPDSYSFPFALKAVIRLSATKTGL 130
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL-GSLLAACR 395
++ + + + + ++ +YS + + DA + + +P+ V L ++L +
Sbjct: 131 QFHSQAIR-FGLHSHLHVLVSLIRMYS-SSHISDARKLFDGIPLTARNVALWNAMLTSYA 188
Query: 396 TKGDIILAERLMKYLVDLDPGVD-SNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
D+ A+ +L D P + ++ L + YA + + A I RTM+ + +
Sbjct: 189 KICDMPNAQ----HLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQNV 239
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 168/464 (36%), Positives = 265/464 (57%), Gaps = 7/464 (1%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
V V WTS S + + G + F M G PN +T ++L CA+ L
Sbjct: 226 VVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKD--LKS 283
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G IHG + G+ N + V +AL+ +YAK + A +VFD M + +WN ++ Y
Sbjct: 284 GKEIHGFAVRHGMVVN-LFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 342
Query: 161 RRGDIESAVRMFDEMP---VR-DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
+ + E +F +M VR D +W A++ G ++ G EEA+E FR+MQ G +P+ +
Sbjct: 343 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 402
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
TI S+L AC+ L +G IH YV + ++ L+ +Y++CG + +R VF M
Sbjct: 403 TISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMM 462
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
++ +V+WN++I+ A++G EAL F+ M +P+ V+FTG L+ CSH+ L+E+G+
Sbjct: 463 RRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGV 522
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+ F+ M + + V P HY C+VD+YSRAGRL +A ++ MPM+P G+LLAACR
Sbjct: 523 QIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRV 582
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
++ LA+ K L +++P NYV L N+ W A ++R MK RGI K PG S
Sbjct: 583 YKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCS 642
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+++G+ +H F+ GD+S+IES+ IY+ L+ L +K+ GY P+T
Sbjct: 643 WLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDT 686
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 47/338 (13%)
Query: 126 DMYAKFGRMDLATVVFDAMRVKSS-------------FTWNAMIDGYMRRGDIESAVRMF 172
DM V DA+RVK F NA+I Y + +E A R+F
Sbjct: 163 DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 222
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
D++ VRD +SWT+L + +VK G+ + ++ FREM SGV+P+ +T+ S+L ACA + L
Sbjct: 223 DDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 282
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
G IH + ++ N+ VC+ L+ LY++C + AR VF M R +VSWN ++ +
Sbjct: 283 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 342
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
N + F M ++G + D ++ + C G E+ + F M+K
Sbjct: 343 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK-------- 394
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV- 411
M KPNE+ + S+L AC ++ + + + Y+
Sbjct: 395 -------------------------MGFKPNEITISSILPACSFSENLRMGKEIHCYVFR 429
Query: 412 DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
G ++ L MYA G + + + M+ + +
Sbjct: 430 HWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDV 467
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 13/225 (5%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD A ++FD +P D + + L++ G EA++ + +Q G++PD ++
Sbjct: 112 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 171
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
ACA G +H + +V V N LI Y +C C+E AR+VF + R +V
Sbjct: 172 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 231
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SW S+ + GF + ++ F M G KP+ ++ + L AC+ ++ G
Sbjct: 232 SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSG------- 284
Query: 343 KKIYRVSPR----IEHYGC--IVDLYSRAGRLEDALNVVENMPMK 381
K+I+ + R + + C +V LY++ + +A V + MP +
Sbjct: 285 KEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR 329
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
LI + G ARQ+F + + + +++I +G EA++ ++S+Q+ G KPD
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALN 373
F A AC+ +G D LR ++ R + + ++ Y + +E A
Sbjct: 164 MPVFLAAAKACAVSG---DALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARR 220
Query: 374 VVENMPMKPNEVVLGSLLAACRTK 397
V +++ ++ +VV + L++C K
Sbjct: 221 VFDDLVVR--DVVSWTSLSSCYVK 242
>gi|125532120|gb|EAY78685.1| hypothetical protein OsI_33787 [Oryza sativa Indica Group]
Length = 493
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 162/423 (38%), Positives = 256/423 (60%), Gaps = 10/423 (2%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+H+TF L A S L +H + GL ++ V +L+ MYA LA
Sbjct: 60 PSHLTFPFLARAAARLASP--RLARAVHAQPLRRGLLPQDLHVSNSLVHMYAACALPGLA 117
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
+FD + + +WNA++DGY + D+ +A R+F MP RD +SW+A+++G VK G
Sbjct: 118 RRLFDEIPRPNHVSWNALLDGYAKCRDLPAARRVFARMPQRDVVSWSAMIDGCVKCGEHR 177
Query: 198 EALECFREMQIS-----GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
EAL F M+ + GV + VT++SVL ACA++G L G +HRY+ + F N+++
Sbjct: 178 EALAVFEMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFPLNIRL 237
Query: 253 CNTLIDLYSRCGCIEFARQVFQRM--HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
+L+D+Y++CG I A +VF + ++ WN++I G AV+G E+L+ F M+
Sbjct: 238 ATSLVDMYAKCGAIVEALEVFHAVPVESTDVLIWNAVIGGLAVHGMSRESLQMFQKMEHA 297
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
G PD +++ L+AC H GL+++ R+F ++ R+ P +EHY C+VD+ RAGRLE+
Sbjct: 298 GVVPDEITYLCLLSACVHGGLVDEAWRFFRSLEA-QRLRPHVEHYACLVDVLGRAGRLEE 356
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
A VV++MPMKP+ VLG+LL AC G + L E + + LV L P D Y+ L+N+YA
Sbjct: 357 AYGVVKSMPMKPSVSVLGALLNACHIHGWVELGEAVGRQLVHLQPDHDGRYIGLSNIYAV 416
Query: 431 VGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFD 490
+W A K R+ M+ RG++K PG S I++G G+ F+A D++H S IY++L+L++ D
Sbjct: 417 ARRWQEAKKARKVMEERGVKKVPGFSEIDVGRGLCRFIAQDKTHPGSAEIYALLKLIAMD 476
Query: 491 LKL 493
+K+
Sbjct: 477 MKM 479
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 165/462 (35%), Positives = 258/462 (55%), Gaps = 36/462 (7%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
+V V W + IS + + EA + M P+ T +T++S CA S + L
Sbjct: 158 SVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQ--SGSIEL 215
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +H + G N +V N +ID Y
Sbjct: 216 GRQLHSWIEDHGFGSNIKIV--------------------------------NVLIDLYS 243
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G++E+A +F + +D ISW L+ G ++EAL F+EM SG P+ VT++S
Sbjct: 244 KCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLS 303
Query: 221 VLNACANVGTLGIGLWIHRYVLK--QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
VL ACA++G + IG WIH Y+ K + + + +LID+Y++CG IE A+QVF M
Sbjct: 304 VLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLT 363
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R+L SWN++I GFA++G A + F+ M+K G PD ++F G L+ACSH+G+++ G
Sbjct: 364 RSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHI 423
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M + Y+++P++EHYGC++DL G ++A ++ MPM+P+ V+ SLL AC+
Sbjct: 424 FRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHN 483
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ L E + L+ ++P +YVLL+N+YA G+WD KIR + +GI+K PG SSI
Sbjct: 484 NVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSI 543
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
EI S +HEF+ GD+ H + IY MLE + ++ G+VP+T
Sbjct: 544 EIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDT 585
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 216/403 (53%), Gaps = 14/403 (3%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + H + A + M G PN +F LL CA S+ L G IHG
Sbjct: 33 WNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCA--KSKALIEGQQIHGH 90
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG D + + V T+L+ MYA+ GR++ A VFD + ++ A+I GY RG I +
Sbjct: 91 VLKLGYDLD-MYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINN 149
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++FDE+ V+D +SW A+++G+V+ F+EALE +++M + V+PD T+++V++ACA
Sbjct: 150 ARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQ 209
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G++ +G +H ++ F N+K+ N LIDLYS+CG +E A +FQ + K+ ++SWN++
Sbjct: 210 SGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTL 269
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD--IMKKI 345
I G EAL F M + G P+ V+ L AC+H G I+ G R+ I K++
Sbjct: 270 IGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIG-RWIHVYINKRL 328
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSLLAACRTKGDII 401
V+ ++D+Y++ G +E A V ++M + N ++ G + +
Sbjct: 329 KGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHG-KANAAFD 387
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
L ++ K +D D D +V L + + G D I R+M
Sbjct: 388 LFSKMRKNGIDPD---DITFVGLLSACSHSGMLDLGRHIFRSM 427
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 150/387 (38%), Gaps = 100/387 (25%)
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
F + A +F+ ++ + WN M G+ D +A++++
Sbjct: 12 FDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLY------------------ 53
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
C + G+ P+ + +L +CA L G IH +VLK + ++
Sbjct: 54 ----------VCMISL---GLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDM 100
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG------------ 298
V +LI +Y++ G +E A +VF R R +VS+ ++I G+A G++
Sbjct: 101 YVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVK 160
Query: 299 -------------------EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
EALE + M K KPD + ++AC+ +G IE G +
Sbjct: 161 DVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLH 220
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK------------------ 381
++ + I+ ++DLYS+ G +E A + + + K
Sbjct: 221 SWIED-HGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLY 279
Query: 382 ----------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLA 425
PN+V + S+L AC G I + + Y+ GV + LL
Sbjct: 280 KEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLT 339
Query: 426 ---NMYAAVGKWDGAGKIRRTMKGRGI 449
+MYA G + A ++ +M R +
Sbjct: 340 SLIDMYAKCGDIEAAKQVFDSMLTRSL 366
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 163/434 (37%), Positives = 256/434 (58%), Gaps = 4/434 (0%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+T+M P++ITF L+ ++ +C+ +G H + + G +N+V V +L+ M
Sbjct: 105 YTQMLKSRIWPDNITFPFLIKASSEM--ECVLVGEQTHSQIVRFGF-QNDVYVENSLVHM 161
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YA G + A +F M + +W +M+ GY + G +E+A MFDEMP R+ +W+ ++
Sbjct: 162 YANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMI 221
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
NG+ K FE+A++ F M+ GV + ++SV+++CA++G L G + YV+K
Sbjct: 222 NGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMT 281
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
N+ + L+D++ RCG IE A VF+ + + +SW+SII G AV+G +A+ YF+ M
Sbjct: 282 VNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQM 341
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
GF P V+FT L+ACSH GL+E GL ++ MKK + + PR+EHYGCIVD+ RAG+
Sbjct: 342 ISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGK 401
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
L +A N + M +KPN +LG+LL AC+ + +AER+ L+ + P YVLL+N+
Sbjct: 402 LAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNI 461
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF-MAGDRSHIESEHIYSMLEL 486
YA G+WD +R MK + ++K PG S IEI I++F M D+ H E I E
Sbjct: 462 YACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEE 521
Query: 487 LSFDLKLCGYVPET 500
+ ++L GY T
Sbjct: 522 ILGKIRLIGYKGNT 535
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 122/252 (48%), Gaps = 18/252 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WTS ++ +C+ G + A F M + N T+ +++G A + C +
Sbjct: 183 VVSWTSMVAGYCKCGMVENAREMFDEM----PHRNLFTWSIMINGYAK--NNCFEKAIDL 236
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWN-----AMIDGY 159
+ + G+ N V +++ A G ++ ++ + VKS T N A++D +
Sbjct: 237 FEFMKREGVVANET-VMVSVISSCAHLGALEFGERAYEYV-VKSHMTVNLILGTALVDMF 294
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
R GDIE A+ +F+ +P D++SW++++ G G+ +A+ F +M G P VT
Sbjct: 295 WRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFT 354
Query: 220 SVLNACANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+VL+AC++ G + GL I+ + K + ++ ++D+ R G + A +MH
Sbjct: 355 AVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMH- 413
Query: 279 RTLVSWNSIIVG 290
V N+ I+G
Sbjct: 414 ---VKPNAPILG 422
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 112/243 (46%), Gaps = 32/243 (13%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +F ++ + + L+ F +A + +M S + PD +T ++ A +
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS-------------------------- 261
+ + +G H +++ F+++V V N+L+ +Y+
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 262 -----RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
+CG +E AR++F M R L +W+ +I G+A N +A++ F M++EG +
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
+++C+H G +E G R ++ + K + I +VD++ R G +E A++V E
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTA-LVDMFWRCGDIEKAIHVFE 308
Query: 377 NMP 379
+P
Sbjct: 309 GLP 311
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 260/455 (57%), Gaps = 34/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S +S + ++G E F ++ + +T I++L C + L +G +I
Sbjct: 188 VAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN--LEIGELIG 245
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ GL RNN + T+L+DMYAK G +
Sbjct: 246 EYIVSKGLRRNNTLT-TSLIDMYAKC-------------------------------GQV 273
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
++A ++FDEM RD ++W+A+++G+ + +EAL F EMQ V P+ VT++SVL +C
Sbjct: 274 DTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSC 333
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A +G G W+H Y+ K+ K V + LID Y++CG I+ + +VF+ M + + +W
Sbjct: 334 AMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWT 393
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G A NG ALE+F+SM + KP+ V+F G L+ACSHA L++ G F+ M++
Sbjct: 394 ALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRD 453
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ + PRIEHYGC+VD+ RAG LE+A ++NMP PN VV +LLA+CR +I +AE+
Sbjct: 454 FDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEK 513
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
++++ L+P +Y+LL+N YA VG+ + A ++R +K + I+K PG S IE+ +H
Sbjct: 514 SLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVH 573
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
EF + D H S+ I+ L+ + +K GYVP T
Sbjct: 574 EFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNT 608
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 155/319 (48%), Gaps = 37/319 (11%)
Query: 64 AALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTA 123
A L F +M + TF ++L C+ + L G +H L+ K G N
Sbjct: 105 ALLLFKKMHEKSVQHDKFTFSSVLKACSRM--KALREGEQVHALILKSGFKSN------- 155
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
F N +I Y G I A +FD MP R ++W
Sbjct: 156 -------------------------EFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
++L+G+ K G ++E ++ FR++ +E D VT+ISVL AC + L IG I Y++
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
+ + N + +LID+Y++CG ++ AR++F M KR +V+W+++I G+A EAL
Sbjct: 251 KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNL 310
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F+ MQK P+ V+ L +C+ G E G +F I KK +++ + ++D Y
Sbjct: 311 FHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQ--LIDFY 368
Query: 363 SRAGRLEDALNVVENMPMK 381
++ G ++ ++ V + M K
Sbjct: 369 AKCGYIDRSVEVFKEMSFK 387
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 161/433 (37%), Positives = 248/433 (57%), Gaps = 34/433 (7%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F +M G NPN TFI++L C+ + LG +H + K LD N+ VGTAL+DM
Sbjct: 520 FNQMLAEGFNPNMYTFISILRSCSSLSD--VDLGKQVHAQIVKNSLDGND-FVGTALVDM 576
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YA K+ F +E A +F+ + RD +WT ++
Sbjct: 577 YA-----------------KNRF--------------LEDAETIFNRLIKRDLFAWTVIV 605
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
G+ + G E+A++CF +MQ GV+P+ T+ S L+ C+ + TL G +H +K
Sbjct: 606 AGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQS 665
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
++ V + L+D+Y++CGC+E A VF + R VSWN+II G++ +G G+AL+ F +M
Sbjct: 666 GDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAM 725
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
EG PD V+F G L+ACSH GLIE+G ++F+ + KIY ++P IEHY C+VD+ RAG+
Sbjct: 726 LDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGK 785
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
+ + +E M + N ++ ++L AC+ G+I ER L +L+P +DSNY+LL+NM
Sbjct: 786 FHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNM 845
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
+AA G WD +R M RG++K+PG S +E+ +H F++ D SH + I+ L+ L
Sbjct: 846 FAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDL 905
Query: 488 SFDLKLCGYVPET 500
L GY P T
Sbjct: 906 HQKLMSVGYTPNT 918
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 185/422 (43%), Gaps = 68/422 (16%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + ++ + G + F RMT N + T T+L GCA+ S L G ++
Sbjct: 295 AVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCAN--SGNLRAGQIV 352
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H L ++G + + + L+DMY+K G + DA++V
Sbjct: 353 HSLAIRIGCELDE-FISCCLVDMYSKCG------LAGDALKV------------------ 387
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
VR+ D D +SW+A++ ++G EA E F+ M+ SGV P+ T+ S+++A
Sbjct: 388 ---FVRIEDP----DVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSA 440
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
++G L G IH V K F+ + VCN L+ +Y + G ++ +VF+ R L+SW
Sbjct: 441 ATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISW 500
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIE 333
N+++ GF N L FN M EGF P+ +F L +CS HA +++
Sbjct: 501 NALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVK 560
Query: 334 DGL-----------------RYFDIMKKIYR--VSPRIEHYGCIVDLYSRAGRLEDALNV 374
+ L R+ + + I+ + + + IV Y++ G+ E A+
Sbjct: 561 NSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKC 620
Query: 375 VENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV-LLANMYAA 430
M +KPNE L S L+ C + +L + D L +MYA
Sbjct: 621 FIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAK 680
Query: 431 VG 432
G
Sbjct: 681 CG 682
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 144/287 (50%), Gaps = 12/287 (4%)
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
S WN++++ Y + G A ++F E+P RD +SWTAL+ GFV GY A+ F EM+
Sbjct: 163 SHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRR 222
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIE 267
GVE + T + L AC+ L G +H +K DF D + V + L+DLY++CG +
Sbjct: 223 EGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSD-LFVGSALVDLYAKCGEMV 281
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
A +VF M K+ VSWN+++ GFA G + L F M + + L C+
Sbjct: 282 LAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCA 341
Query: 328 HAGLIEDGLRYFDIMKKI-YRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMKPNE 384
++G LR I+ + R+ ++ + C+VD+YS+ G DAL V + P+
Sbjct: 342 NSG----NLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIE-DPDV 396
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAV 431
V +++ KG A + K + GV N LA++ +A
Sbjct: 397 VSWSAIITCLDQKGQSREAAEVFKRM--RHSGVIPNQFTLASLVSAA 441
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 149/335 (44%), Gaps = 43/335 (12%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL--GAM 103
V WT+ I+ G + A F M G N T+ T L C S CL L G
Sbjct: 195 VSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKAC----SMCLDLEFGKQ 250
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H K+G D +++ VG+AL+D+YA + G
Sbjct: 251 VHAEAIKVG-DFSDLFVGSALVDLYA-------------------------------KCG 278
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
++ A R+F MP ++A+SW ALLNGF + G E+ L F M S + T+ +VL
Sbjct: 279 EMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLK 338
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
CAN G L G +H ++ + + + L+D+YS+CG A +VF R+ +VS
Sbjct: 339 GCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVS 398
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W++II G EA E F M+ G P+ + ++A + G + G I
Sbjct: 399 WSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGE---SIHA 455
Query: 344 KIYRVSPRIEHYGC--IVDLYSRAGRLEDALNVVE 376
+ + ++ C +V +Y + G ++D V E
Sbjct: 456 CVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFE 490
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 99/193 (51%), Gaps = 17/193 (8%)
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+L CA+ G L G IH V+K + + N+L+++Y++CG +A +VF + +R
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+VSW ++I GF G+ A+ F M++EG + + ++ AL ACS +E G
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFG----- 248
Query: 341 IMKKIYRVSPRIEHY------GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
K+++ + ++ + +VDLY++ G + A V MP K N V +LL
Sbjct: 249 --KQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMP-KQNAVSWNALLNGF 305
Query: 395 RTKGDIILAERLM 407
GD AE+++
Sbjct: 306 AQMGD---AEKVL 315
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 18/180 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV W + I + + G+ +A F M GT P+ +TFI +LS C+ +G +
Sbjct: 699 TVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSH-------MGLIE 751
Query: 105 HGLVCKLGLDRNNVMVGT-----ALLDMYAKFGRMDLATVVFDAMRVKSS-FTWNAMIDG 158
G L + + T ++D+ + G+ + M++ S+ W ++
Sbjct: 752 EGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGA 811
Query: 159 YMRRGDIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
G+IE +A+++F+ P D+ ++ L N F +G +++ M GV+ +
Sbjct: 812 CKMHGNIEFGERAAMKLFELEPEIDS-NYILLSNMFAAKGMWDDVTNVRALMSTRGVKKE 870
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 154/391 (39%), Positives = 247/391 (63%), Gaps = 1/391 (0%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +HG V K GL+ ++ + T +L MY G + A +F M WN++I G
Sbjct: 145 GRQLHGRVIKEGLEDDSFIRNT-MLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLA 203
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G I+ A ++FDEMP R+ +SW ++++GFV+ G F++ALE FREMQ V+PD T++S
Sbjct: 204 KCGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVS 263
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+LNACA +G G WIH+Y+++ F+ N V LID+Y +CGC E +VF+ +
Sbjct: 264 LLNACAYLGASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCFEEGLKVFECAPTKQ 323
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
L WNS+I+G A NG A++ F +++ G +PD VSF G LTAC+H+G + +F
Sbjct: 324 LSCWNSMILGLANNGCEERAMDLFLELERTGLEPDSVSFIGVLTACAHSGEVHKAGEFFR 383
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+M++ Y + P I+HY C+V++ AG L++A +++ MP++ + ++ SLLAACR G++
Sbjct: 384 LMREKYMIEPSIKHYTCMVNVLGGAGLLDEAEALIKKMPVEGDTIIWSSLLAACRKNGNV 443
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+A+R L +LDP YVL++N YA+ G ++ A + R MK R ++K+ G SSIE+
Sbjct: 444 EMAKRAANCLKNLDPDETCGYVLMSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEV 503
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
+HEF++ + H +S IYS+L +L++D+
Sbjct: 504 DFEVHEFVSCGKKHPKSTEIYSLLGILNWDV 534
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 157/385 (40%), Gaps = 81/385 (21%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH + K GL + V L A + A +VF + K+ F WN +I G+ R
Sbjct: 44 IHANLIKTGLISDTVAASRVLAFCCASPSDRNYAYLVFTRINHKNPFVWNTIIRGFSRSS 103
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
E A+ +F +M V+P +T SV
Sbjct: 104 FPEMAISIFIDMLCSSP-----------------------------SVKPQRLTYPSVFK 134
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC------------------ 265
A A++G G +H V+K+ +D+ + NT++ +Y CGC
Sbjct: 135 AYASLGLARDGRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVA 194
Query: 266 -------------IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
I+ A+++F M +R VSWNS+I GF NG +ALE F MQ+
Sbjct: 195 WNSIIMGLAKCGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDV 254
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH--YGCIVDLYSRAGRLED 370
KPDG + L AC++ G E G R+ I K I R + ++D+Y + G E+
Sbjct: 255 KPDGFTMVSLLNACAYLGASEQG-RW--IHKYIVRNRFELNSIVITALIDMYCKCGCFEE 311
Query: 371 ALNVVENMPMKP----NEVVLGSLLAACRTKGDIILAERLMKYLVDLD-PGVDSNYVLLA 425
L V E P K N ++LG C ER M ++L+ G++ + V
Sbjct: 312 GLKVFECAPTKQLSCWNSMILGLANNGCE--------ERAMDLFLELERTGLEPDSVSFI 363
Query: 426 NMYAAV---GKWDGAGKIRRTMKGR 447
+ A G+ AG+ R M+ +
Sbjct: 364 GVLTACAHSGEVHKAGEFFRLMREK 388
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 130/307 (42%), Gaps = 49/307 (15%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA--- 102
V W S IS R+GR +A F M P+ T ++LL+ CA +LGA
Sbjct: 224 VSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLNACA-------YLGASEQ 276
Query: 103 --MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
IH + + + N++++ TAL+DMY K G + VF+ K WN+MI
Sbjct: 277 GRWIHKYIVRNRFELNSIVI-TALIDMYCKCGCFEEGLKVFECAPTKQLSCWNSMI---- 331
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G G E A++ F E++ +G+EPD V+ I
Sbjct: 332 ---------------------------LGLANNGCEERAMDLFLELERTGLEPDSVSFIG 364
Query: 221 VLNACANVGTL-GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-K 278
VL ACA+ G + G + K + ++K ++++ G ++ A + ++M +
Sbjct: 365 VLTACAHSGEVHKAGEFFRLMREKYMIEPSIKHYTCMVNVLGGAGLLDEAEALIKKMPVE 424
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD-GVSFTGALTACSHAGLIEDGLR 337
+ W+S++ NG V A N ++ PD + A + GL E+ +
Sbjct: 425 GDTIIWSSLLAACRKNGNVEMAKRAANCLKN--LDPDETCGYVLMSNAYASYGLFEEAVE 482
Query: 338 YFDIMKK 344
+MK+
Sbjct: 483 QRLLMKE 489
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 171/452 (37%), Positives = 257/452 (56%), Gaps = 34/452 (7%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
S I + S + + +T+M +G P+ TF T+L A Q LG IH +
Sbjct: 111 NSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQ--ELGKAIHCCI 168
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
++G + +NV V TAL++MY + V DA +V
Sbjct: 169 IQMGFE-SNVYVSTALVNMYGT------CSSVSDARQV---------------------- 199
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
FDE+P R+ +SW AL+ G+ F + ++ FREMQI+G +P VT++ VL ACA++
Sbjct: 200 ---FDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHL 256
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
G L G WI Y+ + NV V LID+Y++CG ++ A ++F+ M + + +WN +I
Sbjct: 257 GALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLI 316
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
G+A+NG AL+ F+ M E FKPD V+F G L AC H GL+ +G YF MK+ + +
Sbjct: 317 SGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGL 376
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
PRIEHYGC+VDL RAG L++A +++ M M+P+ ++ LL ACR G+I L E +K
Sbjct: 377 RPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGEFAIK 436
Query: 409 YLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFM 468
L++L+P NYVLLAN+YA +WD G++R M R ++K PG SSIEI + ++EF+
Sbjct: 437 KLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIEIDNVVYEFV 496
Query: 469 AGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ E +Y +L ++ LKL GYV +T
Sbjct: 497 VSNYIKPGFEEVYKLLADMNKKLKLAGYVADT 528
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 163/391 (41%), Gaps = 93/391 (23%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I+ + + + F M + G P +T + +L CA LGA+
Sbjct: 209 VSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAH-------LGALNQ 261
Query: 106 GLVCKLGLDRN----NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
G +D N NV VGTAL+DMYAK G +D A +F AMRVK+ +TWN +I GY
Sbjct: 262 GRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAM 321
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G RG E AL+ F M + +PD VT + V
Sbjct: 322 NG-----------------------------RG--ESALQAFSRMIMEKFKPDEVTFLGV 350
Query: 222 LNACANVGTLGIGLWIHRYVLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L AC + G + G + +K++F + ++ ++DL R G ++ A+Q+ Q M
Sbjct: 351 LCACCHQGLVNEGR-TYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAM--- 406
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
SMQ PD + + L AC G I+ G F
Sbjct: 407 --------------------------SMQ-----PDPIIWRELLGACRIHGNIQLG--EF 433
Query: 340 DIMKKIYRVSPRI-EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
I KK+ + P E+Y + +LY+R R + V E M + V G
Sbjct: 434 AI-KKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGC--------S 484
Query: 399 DIILAERLMKYLVD--LDPGVDSNYVLLANM 427
I + + +++V + PG + Y LLA+M
Sbjct: 485 SIEIDNVVYEFVVSNYIKPGFEEVYKLLADM 515
>gi|356499342|ref|XP_003518500.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g29230-like [Glycine max]
Length = 446
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 238/386 (61%), Gaps = 1/386 (0%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
+V++ ++ Y + G M A +FD M +WN ++ GY G++E V++F+EMP
Sbjct: 55 DVVLWNVIVSGYIELGDMVAARELFDRMPDCDVMSWNTVLSGYANNGEVELFVKVFEEMP 114
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVE-PDYVTIISVLNACANVGTLGIGL 235
R+ SW L+ G+V+ G F+EALECF+ M + GV P+ T+++VL+AC+ +G L IG
Sbjct: 115 ARNVYSWNGLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAVLSACSRLGDLEIGK 174
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
W+H Y +K N+ V N LID+Y++CG IE A VF + + +++WN+II A++
Sbjct: 175 WVHVYADSIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINSLAMHX 234
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
+AL F M++ G +PDGV+F G L+AC+H GL+ +G +F M Y + P+IEHY
Sbjct: 235 HAADALSLFEGMKRAGERPDGVTFVGILSACTHMGLVRNGFLHFQSMVDDYLIVPQIEHY 294
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
GC+VDL RAG + A+++V MPM+P+ V+ +LL ACR ++ +AE ++ L++L+P
Sbjct: 295 GCMVDLLGRAGLINQAVDIVRKMPMEPDVVIWAALLGACRXYKNVEMAELALQRLIELEP 354
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
N+V+L+N+Y +G+ +++ M+ G +K PG S I + EF + D H
Sbjct: 355 NNPGNFVMLSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVIGCNDSVVEFYSLDERHP 414
Query: 476 ESEHIYSMLELLSFDLKLCGYVPETV 501
E++ IY L+ L+ L+ GYVP V
Sbjct: 415 ETDSIYRALQGLTILLRSHGYVPNLV 440
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 39/246 (15%)
Query: 47 QWTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPSQCLFLGAMIH 105
W I + R+G EA F RM + G PN T + +LS C+ L +G +H
Sbjct: 120 SWNGLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAVLSACSRLGD--LEIGKWVH 177
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+G + N+ VG AL+DMYAK G ++ A VFD + VK TWN +I
Sbjct: 178 VYADSIGY-KGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTII--------- 227
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
N + +AL F M+ +G PD VT + +L+AC
Sbjct: 228 ----------------------NSLAMHXHAADALSLFEGMKRAGERPDGVTFVGILSAC 265
Query: 226 ANVGTLGIGLWIHRYVLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLV 282
++G + G ++H + D+ ++ ++DL R G I A + ++M + +V
Sbjct: 266 THMGLVRNG-FLHFQSMVDDYLIVPQIEHYGCMVDLLGRAGLINQAVDIVRKMPMEPDVV 324
Query: 283 SWNSII 288
W +++
Sbjct: 325 IWAALL 330
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 263/451 (58%), Gaps = 12/451 (2%)
Query: 43 NPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP + + S I+ + + + + FT+M PN TF TL+ C S
Sbjct: 50 NPNIFDYNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSL----- 104
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ L KLG + ++V +++++ ++K + LA VFD ++ W +++ GY
Sbjct: 105 EQVFTLSMKLG-NSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCS 163
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ-----ISGVEPDYV 216
G + A +FD+MP+R+ S++A+++G+V+ G+F E ++ FRE++ + ++ +
Sbjct: 164 CGLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGA 223
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
++SVLNAC VG G WIH YV + + ++++ LID Y +CG ++ A +VF +M
Sbjct: 224 LLVSVLNACTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKM 283
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+ + +W+++I+G A+NG ALE F M+K G KP+ V+F G LTAC+H L +
Sbjct: 284 PVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESA 343
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
R F IM + Y ++P IEHYGC+VD+ +R+G+++ AL + +M ++P+ + GSLL C
Sbjct: 344 RLFGIMSEKYNITPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLM 403
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
G L +++ KYL++ +P YVLLANMYA +GKW+G ++R+ MK RG+ G S
Sbjct: 404 HGHYELGQKVGKYLIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWS 463
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
IEI IH+F A D+ + S IY +L L
Sbjct: 464 FIEIDQTIHKFFADDKCCLYSREIYDVLSHL 494
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 258/445 (57%), Gaps = 10/445 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMI 104
V W IS + +GR +A F RM+ + T ++ LS C+ + L +G I
Sbjct: 113 VSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKN--LEIGERI 170
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ V + +V +G AL+DM+ K G +D A VFD+MR K+ W +M+ GY+ G
Sbjct: 171 YRFV--VTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGR 228
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A +F+ PV+D + WTA++NG+V+ F+EALE FR MQ +G+ PD ++S+L
Sbjct: 229 IDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTG 288
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA G L G WIH Y+ + + V L+D+Y++CGCIE A +VF + +R SW
Sbjct: 289 CAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASW 348
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
S+I G A+NG G AL+ + M+ G + D ++F LTAC+H G + +G + F M +
Sbjct: 349 TSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTE 408
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV---VLGSLLAACRTKGDII 401
+ V P+ EH C++DL RAG L++A +++ M + +E V SLL+A R G++
Sbjct: 409 RHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVK 468
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
+AER+ + L ++ S + LLA++YA+ +W+ +RR MK GI+K PG SSIEI
Sbjct: 469 IAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEID 528
Query: 462 SGIHEFMAGDR--SHIESEHIYSML 484
HEF+ GD SH + + I SML
Sbjct: 529 GVGHEFIVGDDLLSHPKMDEINSML 553
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 134/258 (51%), Gaps = 34/258 (13%)
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-Q 207
S+ N+++ Y G IE ++FDEMP RD +SW L++ +V G FE+A+ F+ M Q
Sbjct: 81 SYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQ 140
Query: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267
S ++ D TI+S L+AC+ + L IG I+R+V+ + F+ +V++ N L+D++ +CGC++
Sbjct: 141 ESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLD 199
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFA--------------------------VNGFV---- 297
AR VF M + + W S++ G+ +NG+V
Sbjct: 200 KARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNR 259
Query: 298 -GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG 356
EALE F MQ G +PD LT C+ G +E G ++ RV+
Sbjct: 260 FDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-KWIHGYINENRVTVDKVVGT 318
Query: 357 CIVDLYSRAGRLEDALNV 374
+VD+Y++ G +E AL V
Sbjct: 319 ALVDMYAKCGCIETALEV 336
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 35/239 (14%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S V V WT+ ++ + + R EA F M G P++ ++LL+GCA + L
Sbjct: 238 RSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCA--QTGAL 295
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G IHG + + + + V VGTAL+DMYAK G ++ A VF ++ + + +W
Sbjct: 296 EQGKWIHGYINENRVTVDKV-VGTALVDMYAKCGCIETALEVFYEIKERDTASW------ 348
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
T+L+ G G AL+ + EM+ GV D +T
Sbjct: 349 -------------------------TSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITF 383
Query: 219 ISVLNACANVGTLGIGLWI-HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
++VL AC + G + G I H + + + + C+ LIDL R G ++ A ++ +M
Sbjct: 384 VAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 9/270 (3%)
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
+ +L F + L F E++ G+ PD T+ VL + + + G +H Y +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
K + + V N+L+ +Y+ G IE +VF M +R +VSWN +I + NG +A+
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 303 YFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
F M +E K D + L+ACS +E G R + + + +S RI + +VD+
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDM 191
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN- 420
+ + G L+ A V ++M K N S++ + G I A + L + P D
Sbjct: 192 FCKCGCLDKARAVFDSMRDK-NVKCWTSMVFGYVSTGRIDEA----RVLFERSPVKDVVL 246
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
+ + N Y ++D A ++ R M+ GI+
Sbjct: 247 WTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 263/467 (56%), Gaps = 37/467 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ ISR+ ++G +EA F M PN TF T+L+ C + L LG I
Sbjct: 117 VVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSC--IRASGLALGKQI 174
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HGL+ K D +++ VG++LLDMYAK G
Sbjct: 175 HGLIVKWNYD-SHIFVGSSLLDMYAK-------------------------------AGQ 202
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
IE A +F+ +P RD +S TA++ G+ + G EEALE F+ +Q G+ P+YVT S+L A
Sbjct: 203 IEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTA 262
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
+ + L G H +VL+++ + N+LID+YS+CG + +A+++F M +RT +SW
Sbjct: 263 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISW 322
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFD-IM 342
N+++VG++ +G E LE F M+ E KPD V+ L+ CSH + + GL +D ++
Sbjct: 323 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMV 382
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
Y + P EHYGCIVD+ RAGR+++A ++ MP KP VLGSLL ACR + +
Sbjct: 383 AGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDI 442
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
E + L++++P NYV+L+N+YA+ G+W+ +R M + + K+PG S I+
Sbjct: 443 GEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQ 502
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
+H F A DR+H E + + ++ +S +K GYVP+ ++ LY+ D
Sbjct: 503 TLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPD-ISCVLYDVD 548
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 173/343 (50%), Gaps = 40/343 (11%)
Query: 40 STVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
S+ N +Q IS+ C +GR+ EA LE M + G + LL+ C D + L
Sbjct: 14 SSPNSVLQTFRPISQLCSNGRLQEALLE---MVMLGPEIGFHCYDALLNACLD--KRALR 68
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
G +H M+ T L +++ ++ Y
Sbjct: 69 EGQRVHAH-----------MIKTRYL---------------------PATYLRTRLLIFY 96
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ +E A ++ DEMP ++ +SWTA+++ + + G+ EAL F EM S +P+ T
Sbjct: 97 GKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFA 156
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+VL +C L +G IH ++K ++ ++ V ++L+D+Y++ G IE AR++F+ + +R
Sbjct: 157 TVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPER 216
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-Y 338
+VS +II G+A G EALE F +Q EG +P+ V++ LTA S L++ G + +
Sbjct: 217 DVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAH 276
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
++++ +++ ++D+YS+ G L A + +NMP +
Sbjct: 277 CHVLRRELPFYAVLQN--SLIDMYSKCGNLSYAQRLFDNMPER 317
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 118/239 (49%), Gaps = 9/239 (3%)
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
G +EAL EM + G E + ++LNAC + L G +H +++K + +
Sbjct: 33 GRLQEAL---LEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLR 89
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
L+ Y +C C+E AR+V M ++ +VSW ++I ++ G EAL F M + K
Sbjct: 90 TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGK 149
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
P+ +F LT+C A + G + ++ K + I ++D+Y++AG++E+A
Sbjct: 150 PNEFTFATVLTSCIRASGLALGKQIHGLIVK-WNYDSHIFVGSSLLDMYAKAGQIEEARE 208
Query: 374 VVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP-GVDSNYVLLANMYAAV 431
+ E +P + + V +++A G L E ++ L G+ NYV A++ A+
Sbjct: 209 IFECLPER-DVVSCTAIIAGYAQLG---LDEEALEMFQRLQSEGMRPNYVTYASLLTAL 263
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 233/356 (65%), Gaps = 5/356 (1%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QI 208
F NA+I Y G A +FDE VRD ++W ++N + +G E+A + EM ++
Sbjct: 147 FVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKL 206
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD-FKDNVKVC--NTLIDLYSRCGC 265
+ PD VT++S++ ACA +G L G ++H Y + D F+ N + L+D+Y++CG
Sbjct: 207 DNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGS 266
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
I+ A QVF+RM R + +WN++I G A++G +A+ F+ M+ + PD V+F L A
Sbjct: 267 IDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCA 326
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
CSHAGL+++GL F MK +++ PR+EHYGC+VDL RA +++DAL +ENMP+K N V
Sbjct: 327 CSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSV 386
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+ +LL ACR+ G LAE++ + +++L+P YV+L+N+YA V +WD A K+R+ MK
Sbjct: 387 LWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMK 446
Query: 446 GRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL-CGYVPET 500
+GI+K PG S IE+ IH+F+AGDRSH+++E IY+M+E ++ + L G+VP T
Sbjct: 447 NKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGT 502
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 90/176 (51%), Gaps = 9/176 (5%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMT-LHGTNPNHITFITLLSGCADFPSQC 97
+STV V W I+ H G +A MT L P+ +T ++L+ CA +
Sbjct: 171 ESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGN-- 228
Query: 98 LFLGAMIHGLVCKLGLDRNN--VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAM 155
L G +H +L N +++ TAL+DMYAK G +DLA VF MRV++ FTWNA+
Sbjct: 229 LERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAL 288
Query: 156 IDGYMRRGDIESAVRMFDEMP----VRDAISWTALLNGFVKRGYFEEALECFREMQ 207
I G G E A+ +FD+M + D +++ ALL G +E L F+ M+
Sbjct: 289 IGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMK 344
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 40/252 (15%)
Query: 238 HRYVLKQDFKDNVKVCNTLIDLY--SRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
H +L+ N + LI S G + +AR++F +M N++I G+A +
Sbjct: 31 HALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQ 90
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF-DIMKK-----IYRVS 349
EA+ + M + G D ++ L AC+ G ++ G R+ +++K ++ ++
Sbjct: 91 NPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVIN 150
Query: 350 PRIEHY------GCIVDLYSRA------------------GRLEDALNVVENMP----MK 381
I+ Y GC D++ + G E A ++++ M ++
Sbjct: 151 ALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLR 210
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP-GVDSNYVL---LANMYAAVGKWDGA 437
P+EV + SL+ AC G++ + L Y +LD ++ + VL L +MYA G D A
Sbjct: 211 PDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLA 270
Query: 438 GKIRRTMKGRGI 449
++ R M+ R +
Sbjct: 271 LQVFRRMRVRNV 282
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 167/459 (36%), Positives = 260/459 (56%), Gaps = 35/459 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFL 100
V V W++ I + S + EA F +M L +P +T ++L CA L
Sbjct: 273 VRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTD--LSR 330
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +H + KLG + +++G LL MYAK G +D
Sbjct: 331 GRKLHCYIIKLGXVLD-ILLGNTLLSMYAKCGVID------------------------- 364
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
A+R FD M +D++S++A+++G V+ G AL FR MQ+SG++PD T++
Sbjct: 365 ------DAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLG 418
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VL AC+++ L G H Y++ + F + +CN LID+YS+CG I FAR+VF RM +
Sbjct: 419 VLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHD 478
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+VSWN++I+G+ ++G EAL F+ + G KPD ++F L++CSH+GL+ +G +FD
Sbjct: 479 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 538
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + + + PR+EH C+VD+ RAG +++A + + NMP +P+ + +LL+ACR +I
Sbjct: 539 AMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNI 598
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E + K + L P N+VLL+N+Y+A G+WD A IR T K G++K PG S IEI
Sbjct: 599 ELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEI 658
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+H F+ GD+SH++ I LE L ++K GY E
Sbjct: 659 NGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAE 697
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 158/336 (47%), Gaps = 38/336 (11%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I+ G +A +M G PN T + +L + ++ L G +
Sbjct: 175 VVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGE--AKALGHGKAL 232
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + D N V+VGT LLDMYAK + A
Sbjct: 233 HGYCVRRSFD-NGVVVGTGLLDMYAKCQCLLYAR-------------------------- 265
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLN 223
++FD M VR+ +SW+A++ G+V +EALE F +M + ++P VT+ SVL
Sbjct: 266 -----KIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLR 320
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA + L G +H Y++K ++ + NTL+ +Y++CG I+ A + F M+ + VS
Sbjct: 321 ACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVS 380
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL-RYFDIM 342
+++I+ G NG AL F MQ G PD + G L ACSH ++ G + ++
Sbjct: 381 FSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLI 440
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+ + I ++D+YS+ G++ A V M
Sbjct: 441 VRGFATDTLI--CNALIDMYSKCGKISFAREVFNRM 474
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 191/427 (44%), Gaps = 50/427 (11%)
Query: 2 NSSATATILPQPFLPHQQNPNQNLT--------TTPQISIQTNNSKSTVNPTV-QWTSSI 52
S A + Q FL + N + ++ + Q+ + NP+V W I
Sbjct: 22 KSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQII 81
Query: 53 SRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKL 111
+ +G + A++ LH G PN T+ +L C+ + + G IH
Sbjct: 82 RAYAWNGPF-DGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLA--IEDGVEIHSHAKMF 138
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
GL+ ++V V TAL+D YA + G + A R+
Sbjct: 139 GLE-SDVFVCTALVDFYA-------------------------------KCGILVEAQRL 166
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTL 231
F M RD ++W A++ G G ++A++ +MQ G+ P+ TI+ VL L
Sbjct: 167 FSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKAL 226
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
G G +H Y +++ F + V V L+D+Y++C C+ +AR++F M R VSW+++I G+
Sbjct: 227 GHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGY 286
Query: 292 AVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
+ + EALE F+ M K+ P V+ L AC+ + G + + K+ V
Sbjct: 287 VXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLD 346
Query: 351 RIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL--MK 408
I ++ +Y++ G ++DA+ + M K + V ++++ C G+ +A + M
Sbjct: 347 -ILLGNTLLSMYAKCGVIDDAIRFFDXMNPK-DSVSFSAIVSGCVQNGNAAVALSIFRMM 404
Query: 409 YLVDLDP 415
L +DP
Sbjct: 405 QLSGIDP 411
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 148/352 (42%), Gaps = 72/352 (20%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
L +Y ++ LA +FD + S WN +I Y +W
Sbjct: 49 LTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAY----------------------AW 86
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
G F+ A++ + M GV P+ T VL AC+ + + G+ IH +
Sbjct: 87 N---------GPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKM 137
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
+ +V VC L+D Y++CG + A+++F M R +V+WN++I G ++ G +A++
Sbjct: 138 FGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQL 197
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDG--------LRYFD--------------- 340
MQ+EG P+ + G L A + G R FD
Sbjct: 198 IMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAK 257
Query: 341 -----IMKKIYRV-SPRIE-HYGCIVDLYSRAGRLEDALNVVENMPMK----PNEVVLGS 389
+KI+ V R E + ++ Y + +++AL + + M +K P V LGS
Sbjct: 258 CQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGS 317
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN----MYAAVGKWDGA 437
+L AC D+ +L Y++ L +D +LL N MYA G D A
Sbjct: 318 VLRACAKLTDLSRGRKLHCYIIKLGXVLD---ILLGNTLLSMYAKCGVIDDA 366
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 136/293 (46%), Gaps = 11/293 (3%)
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+ +L AC +L IH++ LK + V + L LY C + AR++F +
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+++ WN II +A NG A++ ++SM G +P+ ++ L ACS IEDG+
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
K++ + + +VD Y++ G L +A + +M + + V +++A C G
Sbjct: 132 HS-HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLYG 189
Query: 399 DIILAERLMKYLVDL-DPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
L + ++ ++ + + G+ N + + VG+ G + + G +++ +
Sbjct: 190 ---LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGH-GKALHGYCVRRSFD-NG 244
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLEL---LSFDLKLCGYVPETVAGELYE 507
+ +G+G+ + A + + + I+ ++ + +S+ + GYV E E
Sbjct: 245 VVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALE 297
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 151/455 (33%), Positives = 259/455 (56%), Gaps = 34/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S + + ++G +A F +M G +P +T + L CAD L G +H
Sbjct: 315 VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGD--LERGKFVH 372
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V +L L +++ V +L+ MY+K R+D+A+ +F+ +
Sbjct: 373 KFVDQLNLG-SDISVMNSLISMYSKCKRVDIASDIFNNLNG------------------- 412
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
R +SW A++ G+ + G EAL CF EM+ G++PD T++SV+ A
Sbjct: 413 ------------RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPAL 460
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A + WIH +++ N+ V L+D+YS+CG I AR++F + R +++WN
Sbjct: 461 AELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWN 520
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G+ +G AL+ F+ M+K +P+ +++ ++ACSH+GL+++GLR+F MK+
Sbjct: 521 AMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQD 580
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P ++HYG +VDL RAGR+++A + +ENMP+ P V G+ AC+ +I + E+
Sbjct: 581 YGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEK 640
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
K L +L+P +VLLAN+YA+ KW ++R+TM+ +G++K PG S +E+ + +H
Sbjct: 641 AAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVH 700
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F +G +H +S+ IY+ LE L +++K GYVP+T
Sbjct: 701 SFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDT 735
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 154/317 (48%), Gaps = 36/317 (11%)
Query: 63 EAALEF-TRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG 121
E AL F RM P F LL C D + L G IHG + NV
Sbjct: 129 ETALAFLCRMRYDDVKPVVYNFTYLLKVCGD--NADLKRGKEIHGQLITNSF-AANVFAM 185
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
T +++MYAK ++D A +MFD MP RD +
Sbjct: 186 TGVVNMYAKCRQID-------------------------------DAYKMFDRMPERDLV 214
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
SW ++ GF + G+ ++ALE MQ G PD +T+++VL A A+VG L +G IH Y
Sbjct: 215 SWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYA 274
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
++ F V + L D+YS+CG +E AR +F M ++T+VSWNS++ G+ NG +A+
Sbjct: 275 IRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAI 334
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
F M +EG P GV+ AL AC+ G +E G + ++ + I ++ +
Sbjct: 335 AVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQL-NLGSDISVMNSLISM 393
Query: 362 YSRAGRLEDALNVVENM 378
YS+ R++ A ++ N+
Sbjct: 394 YSKCKRVDIASDIFNNL 410
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 146/334 (43%), Gaps = 48/334 (14%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAIS--WTALLNGFVKRGYFEEALECFREMQISGVE 212
++ + + G I A R+F+ P+ D + + +L G+ K E AL M+ V+
Sbjct: 87 LVSLFSKYGSINEAARVFE--PIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVK 144
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P +L C + L G IH ++ F NV ++++Y++C I+ A ++
Sbjct: 145 PVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKM 204
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL- 331
F RM +R LVSWN+II GF+ NGF +ALE MQ EG +PD ++ L A + GL
Sbjct: 205 FDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLL 264
Query: 332 ----------------------------------IEDGLRYFDIMKKIYRVSPRIEHYGC 357
+E FD M + VS +
Sbjct: 265 MVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVS-----WNS 319
Query: 358 IVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
++D Y + G E A+ V E M + P V + L AC GD+ + + K++ L+
Sbjct: 320 MMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLN 379
Query: 415 PGVDSNYV-LLANMYAAVGKWDGAGKIRRTMKGR 447
G D + + L +MY+ + D A I + GR
Sbjct: 380 LGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR 413
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 172/456 (37%), Positives = 249/456 (54%), Gaps = 36/456 (7%)
Query: 77 NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
+P+ TF L A+ S+ L G +H + G D ++ VGT L+ MYA+ G
Sbjct: 100 SPDSFTFAFALKAVAN--SRHLRPGIQLHSQAFRHGFD-AHIFVGTTLISMYAECGDSGS 156
Query: 137 ATVVFDAMRVKSSFTWNA-------------------------------MIDGYMRRGDI 165
A VFD M + TWNA M+ GY + G++
Sbjct: 157 ARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGEL 216
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A R+F EMP+RD +SW+ ++ GF G F+EA FRE+ + + V++ VL+AC
Sbjct: 217 GLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSAC 276
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSW 284
A G G +H +V K F V N LID YS+CG + AR VFQ M R++VSW
Sbjct: 277 AQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSW 336
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
SII G A++G EA++ F+ M++ G +PDG++F L ACSH+GL+E+G F MK
Sbjct: 337 TSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKN 396
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y + P IEHYGC+VDLY RA RL+ A + MP+ PN ++ +LL AC G+I +AE
Sbjct: 397 LYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAE 456
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ L ++DP ++VLL+N+YA GKW IRRTM ++K PG S IEI I
Sbjct: 457 LVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVI 516
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKL-CGYVPE 499
+ F+AG++ + +E + L + L+ GY P+
Sbjct: 517 YGFVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQ 552
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 141/384 (36%), Gaps = 107/384 (27%)
Query: 82 TFITLLSGCADF-PSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVV 140
+++LLS C+ P++ IH +CK GL + ++ G LL A +
Sbjct: 4 AWVSLLSKCSSLKPTK------QIHAQICKTGLHTDPLVFGKLLLH---------CAITI 48
Query: 141 FDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEAL 200
DA+ A+R+F P D L+ +L
Sbjct: 49 SDALHY---------------------ALRLFHHFPNPDTFMHNTLIRSLSLSQTPLSSL 87
Query: 201 ECFREMQIS-GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL 259
F +++ + PD T L A AN L G+ +H + F ++ V TLI +
Sbjct: 88 HPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISM 147
Query: 260 YS-------------------------------RCGCIEFARQVFQRMHKRTLVSWNSII 288
Y+ RCG +E A+ VF M R L SWN ++
Sbjct: 148 YAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGML 207
Query: 289 VGFAVNGFVG-------------------------------EALEYFNSMQKEGFKPDGV 317
G+A G +G EA +F + +E + + V
Sbjct: 208 AGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEV 267
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKK---IYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
S TG L+AC+ AG E G ++K +Y S ++D YS+ G + A V
Sbjct: 268 SLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVN----NALIDTYSKCGNVAMARLV 323
Query: 375 VENMPMKPNEVVLGSLLAACRTKG 398
+NMP+ + V S++A G
Sbjct: 324 FQNMPVARSIVSWTSIIAGLAMHG 347
>gi|224066751|ref|XP_002302197.1| predicted protein [Populus trichocarpa]
gi|222843923|gb|EEE81470.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 158/420 (37%), Positives = 256/420 (60%), Gaps = 18/420 (4%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + IS + ++G + A++ F +M+ N +++I ++ G A G M+
Sbjct: 23 VVTWNAMISGYGKNGDMKSASVLFDKMSTR----NAVSWIEMIDGFAR-------SGDMV 71
Query: 105 HG--LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
++ + NV+ T ++D YA G M+ A ++F+ M ++ F W++MI GY +
Sbjct: 72 AARRTFNEVPFELKNVVTWTVMIDGYASKGEMEAARLLFEDMPQRNFFVWSSMISGYCKI 131
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G+++ A +FD +PVR+ ++W +L+ G+ + G+ EEAL+ F +MQ G EPD VT++ VL
Sbjct: 132 GNVKEARAIFDRVPVRNLVNWNSLICGYSQNGFCEEALDAFGKMQNEGYEPDEVTVVGVL 191
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+ACA + L +G +H+ + + K N V N L+D+Y++CG + AR +F+RM +
Sbjct: 192 SACAQLSLLDVGKDVHKMICAKGMKLNEFVVNALVDMYAKCGDLTGARLIFERMTNKNNA 251
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
WNS+I GFAV+G EALE+F M++ KPD ++F L+AC H G +E GL F M
Sbjct: 252 CWNSMISGFAVHGKTKEALEFFGRMEESNEKPDEITFLSVLSACVHGGFVEVGLEIFSKM 311
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
++ Y +S I+HYGC+VDL RAGR++DA +++++MPMKPN+ V G+ L ACR D +
Sbjct: 312 ER-YGLSASIKHYGCLVDLLGRAGRIQDAYHLIKSMPMKPNDTVWGAFLGACRIHMDNDM 370
Query: 403 AERLMKYLVDLDPGVDS----NYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
E++++ + D VDS +Y LL N+YA G W+ AG++ M RG+QK G SS+
Sbjct: 371 VEQVVEDVCTSDSSVDSGNDPHYALLLNIYAGSGSWEKAGRVSMVMADRGLQKTSGRSSL 430
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 143/259 (55%), Gaps = 11/259 (4%)
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTAL 186
MYAK G + + +F+ M ++ TWNAMI GY + GD++SA +FD+M R+A+SW +
Sbjct: 1 MYAKCGDIPDSRKLFEYMPERNVVTWNAMISGYGKNGDMKSASVLFDKMSTRNAVSWIEM 60
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
++GF + G A F E+ + VT +++ A+ G + R + +
Sbjct: 61 IDGFARSGDMVAARRTFNEVPFE--LKNVVTWTVMIDGYASKGEMEAA----RLLFEDMP 114
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
+ N V +++I Y + G ++ AR +F R+ R LV+WNS+I G++ NGF EAL+ F
Sbjct: 115 QRNFFVWSSMISGYCKIGNVKEARAIFDRVPVRNLVNWNSLICGYSQNGFCEEALDAFGK 174
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSR 364
MQ EG++PD V+ G L+AC+ L++ G D+ K I ++ + +VD+Y++
Sbjct: 175 MQNEGYEPDEVTVVGVLSACAQLSLLDVGK---DVHKMICAKGMKLNEFVVNALVDMYAK 231
Query: 365 AGRLEDALNVVENMPMKPN 383
G L A + E M K N
Sbjct: 232 CGDLTGARLIFERMTNKNN 250
>gi|225445484|ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 253/445 (56%), Gaps = 6/445 (1%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
+ S I + S A L + M +G N+ TF L+ C S +G ++H
Sbjct: 80 YNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKACTTLGSSSKLIGCLVHAH 139
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V G D + +V +AL++ Y+ M A +FD + + W AMIDGY + GD+E
Sbjct: 140 VVTFGFDEDPFVV-SALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDGYGKMGDVEH 198
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +F++MP R+AISW+A++ + + G F+E L FR MQ +G P+ ++SVL ACA+
Sbjct: 199 ARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVSVLTACAH 258
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G L GLW+H Y + +F N + L+D+YS+CGC+E A FQ + + +WN++
Sbjct: 259 LGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKDAGAWNAM 318
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G A+NG ++LE FN M G +P +F LTAC+HA L+++GL+ F+ M Y
Sbjct: 319 ISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVKEGLKLFEQMSSNYG 378
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAE 404
V P++EHY C+VDL +RAG L +A +E + + V G++L ACRT G+I +
Sbjct: 379 VEPQLEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAMLGACRTYGNIEVGN 438
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWD-GAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
R+ K L D+ +VL N+Y G WD A ++RR + G++KKPG S IE+
Sbjct: 439 RVWKKLADMGVADCGTHVLSYNLYREAG-WDMEAKRVRRLISEAGMKKKPGCSIIEVDGT 497
Query: 464 IHEFMAGDRSHIESEHIYSMLELLS 488
+ EF+AGD SH ++ I L+ LS
Sbjct: 498 VEEFLAGDLSHSQAPQICKTLDSLS 522
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 117/279 (41%), Gaps = 67/279 (24%)
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A ++F + +++ F +N+MI GY + P R
Sbjct: 65 ACLIFQNLSLRNIFMYNSMIRGY-----------VLSHSPTR------------------ 95
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLG--IGLWIHRYVLKQDFKDNVKVCN 254
A+ C+ +M G+ + T ++ AC +G+ IG +H +V+ F ++ V +
Sbjct: 96 --AILCYLDMLNYGLLANNYTFPPLIKACTTLGSSSKLIGCLVHAHVVTFGFDEDPFVVS 153
Query: 255 TLIDLYS-------------------------------RCGCIEFARQVFQRMHKRTLVS 283
LI+ YS + G +E AR +F+ M +R +S
Sbjct: 154 ALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDGYGKMGDVEHARILFEDMPERNAIS 213
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W++++ ++ G E L F MQ+ G P+ LTAC+H G + GL K
Sbjct: 214 WSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVSVLTACAHLGALAQGLWVHSYAK 273
Query: 344 KI-YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ + +P + +VD+YS+ G +E AL+ + +P K
Sbjct: 274 QCNFDSNPILA--TALVDMYSKCGCVESALSTFQGIPNK 310
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 8/193 (4%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W++ ++ + R G E F RM GT PN +++L+ CA + L G +
Sbjct: 211 AISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVSVLTACAHLGA--LAQGLWV 268
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + D N ++ TAL+DMY+K G ++ A F + K + WNAMI G GD
Sbjct: 269 HSYAKQCNFDSNPIL-ATALVDMYSKCGCVESALSTFQGIPNKDAGAWNAMISGVAMNGD 327
Query: 165 IESAVRMFDEMPVRDA----ISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTII 219
++ +F++M ++ A+L +E L+ F +M + GVEP
Sbjct: 328 AWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVKEGLKLFEQMSSNYGVEPQLEHYA 387
Query: 220 SVLNACANVGTLG 232
+++ A G L
Sbjct: 388 CLVDLMARAGMLA 400
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/461 (36%), Positives = 266/461 (57%), Gaps = 40/461 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + IS + +G EA F M + P+ T +T++S CA S + LG +
Sbjct: 187 VSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQ--SDSIELGRHV 244
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + G N +V NA+ID Y + G+
Sbjct: 245 HSWINDHGFASNLKIV--------------------------------NALIDLYSKFGE 272
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E+A +FD + +D ISW L+ G+ ++EAL F+EM SG P+ VT++S+L A
Sbjct: 273 VETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 332
Query: 225 CANVGTLGIGLWIHRYV---LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF-QRMHKRT 280
CA++G + IG WIH Y+ LK + + +LID+Y++CG I+ A+QVF M R+
Sbjct: 333 CAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRS 392
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
L +WN++I GFA++G A + F+ M+ G +PD ++F G L+ACSH+G+++ G F
Sbjct: 393 LSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFR 452
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + Y ++P++EHYGC++DL +G ++A ++ MPM+P+ V+ SLL AC+ G++
Sbjct: 453 SMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNL 512
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK-PGLSSIE 459
L E K L+ ++PG +YVLL+N+YAA G+W+ KIR + +G++KK PG SSIE
Sbjct: 513 ELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIE 572
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I S +HEF+ GD+ H ++ IY MLE + L+ G+VP+T
Sbjct: 573 IDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDT 613
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 189/334 (56%), Gaps = 8/334 (2%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + H S A + M G P+ TF LL CA S+ G IHG
Sbjct: 57 WNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCA--KSKIRKEGQQIHGH 114
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG D + + V T+L+ MYA+ GR++ A VFD + ++ A+I GY+ RG IES
Sbjct: 115 VLKLGFDLD-IYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIES 173
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLNACA 226
A ++FDE+P +D +SW A+++G+V+ G ++EALE F+EM + + V PD T+++V++ACA
Sbjct: 174 AQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACA 233
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
++ +G +H ++ F N+K+ N LIDLYS+ G +E A ++F + + ++SWN+
Sbjct: 234 QSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNT 293
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD--IMKK 344
+I G+ EAL F M + G P+ V+ L AC+H G I+ G R+ I KK
Sbjct: 294 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG-RWIHVYINKK 352
Query: 345 IYRVSPRIEHY-GCIVDLYSRAGRLEDALNVVEN 377
+ V + ++D+Y++ G ++ A V ++
Sbjct: 353 LKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDS 386
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 154/383 (40%), Gaps = 52/383 (13%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLD---MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
IH + K GL N + + LL+ + F A VFD ++ + WN M G+
Sbjct: 7 IHAQMIKTGLHNTNYAL-SKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHA 65
Query: 161 RRGDIESAVRMFDEMP----VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
D SA++++ M + D+ ++ LL K +E + + G + D
Sbjct: 66 LSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIY 125
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
S+++ A G L R V +V LI Y G IE A+++F +
Sbjct: 126 VHTSLISMYAQNGRLEDA----RKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEI 181
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNS-MQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+ +VSWN++I G+ G EALE F M +PD + ++AC+ + IE G
Sbjct: 182 PGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELG 241
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK-------------- 381
R+ + + ++ ++DLYS+ G +E A + + + K
Sbjct: 242 -RHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTH 300
Query: 382 --------------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
PN+V + S+L AC G I + + Y+ GV +N
Sbjct: 301 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNV 360
Query: 422 ----VLLANMYAAVGKWDGAGKI 440
L +MYA G D A ++
Sbjct: 361 SSLQTSLIDMYAKCGDIDAAQQV 383
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
+A VF + + L+ WN++ G A++ AL+ + M G PD +F L +C+
Sbjct: 41 YAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCA 100
Query: 328 HAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
+ + ++G + I + ++ ++ Y ++ +Y++ GRLEDA V + + + V
Sbjct: 101 KSKIRKEGQQ---IHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFD-ISSHRDVV 156
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVD-SNYVLLANMYAAVGKWDGAGKIRRTM 444
+L+A ++G I A++L D PG D ++ + + Y G + A ++ + M
Sbjct: 157 SYTALIAGYVSRGYIESAQKLF----DEIPGKDVVSWNAMISGYVETGNYKEALELFKEM 212
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 67/188 (35%), Gaps = 52/188 (27%)
Query: 32 SIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA 91
S +N S ST W + IS GR A F+RM ++G P+ ITF+ LLS C
Sbjct: 386 SSMSNRSLST------WNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSAC- 438
Query: 92 DFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT 151
+ G +DL +F +M T
Sbjct: 439 -------------------------------------SHSGMLDLGRNIFRSMTRGYEIT 461
Query: 152 -----WNAMIDGYMRRGDIESAVRMFDEMPVR-DAISWTALLNGFVKRGYFEEALECFRE 205
+ MID G + A M + MP+ D + W +LL G E E F +
Sbjct: 462 PKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELG-ESFAK 520
Query: 206 MQISGVEP 213
I +EP
Sbjct: 521 KLIK-IEP 527
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/461 (36%), Positives = 255/461 (55%), Gaps = 41/461 (8%)
Query: 44 PTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
P W + + R+G EA L + M + F L C+D L G
Sbjct: 141 PESVWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGD--LRTGRA 198
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H V K D + V V ALL +Y++ G
Sbjct: 199 VHAQVLKATEDPDQV-VNNALLRLYSE-------------------------------DG 226
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
E A+RMFD MP R+ +SW +L+ G VK+ EA+E FR MQ G+ +VT+ ++L
Sbjct: 227 CFEEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILP 286
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
CA V LG G IH ++K K + V N+L+D+Y++CG +++ R+VF M + L S
Sbjct: 287 VCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTS 346
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN++I G+A+NG + EA+E F M GF PDG++F L+ CSHAGL +DG R F++MK
Sbjct: 347 WNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMK 406
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ +SP +EHY C+VD+ RAGR+++AL +V+NMP KP + GSLL +CR G++ LA
Sbjct: 407 MDHGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLA 466
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E + K L +L+P NYV+L+N+YA G W+ +R M+ RG+ K+ G S ++I S
Sbjct: 467 EAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSK 526
Query: 464 IHEFMAGD----RSHIESEHIYSMLELLSFDLKLCGYVPET 500
IH F+AG R+ +E + ++ + L ++ GYVP+T
Sbjct: 527 IHTFVAGGSNEFRNSVEYKKVW---KRLMEAMEEVGYVPDT 564
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 151/376 (40%), Gaps = 60/376 (15%)
Query: 29 PQISIQTNNSKSTVNPTVQWTSSISRH----------CRSGRIAEAA--LEFTRMTLHGT 76
P IS+ TN + ST +++ +H +SG++ EA +E T
Sbjct: 4 PAISLSTNLTVSTNITATSAPTTLHKHRLHNSTLKSLSKSGKLDEALRLIESWPSKSPAT 63
Query: 77 NPNHITFITLLSGCADFPSQCLFLGAMIHGLV-----------CKLGLDRNNVMVGTALL 125
P+ + CA F C+ A+ HG C L N + G L+
Sbjct: 64 APD-------VEACALFLHSCISRKALEHGQRLYLQLLLYRDRCNHNLLNNPTLKGK-LI 115
Query: 126 DMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTA 185
+++ GR+D A VF+ DG D+ +V W A
Sbjct: 116 TLFSVCGRVDEARRVFE--------------DGG-EDVDLPESV-------------WVA 147
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
+ G+ + GY +EAL + EM + L AC+++G L G +H VLK
Sbjct: 148 MGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKAT 207
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
+ V N L+ LYS GC E A ++F M R LVSWNS+I G V EA+E F
Sbjct: 208 EDPDQVVNNALLRLYSEDGCFEEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFR 267
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
MQ +G V+ T L C+ + G ++ K P +VD+Y++
Sbjct: 268 IMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVK-STAKPDAPVLNSLVDMYAKC 326
Query: 366 GRLEDALNVVENMPMK 381
G ++ V M K
Sbjct: 327 GAMDYCRRVFNGMQGK 342
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 16/236 (6%)
Query: 187 LNGFVKRGYFEEALECFREM--QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV--- 241
L K G +EAL + PD L++C + L G ++ +
Sbjct: 37 LKSLSKSGKLDEALRLIESWPSKSPATAPDVEACALFLHSCISRKALEHGQRLYLQLLLY 96
Query: 242 ---LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS---WNSIIVGFAVNG 295
+ +N + LI L+S CG ++ AR+VF+ + + W ++ +G++ NG
Sbjct: 97 RDRCNHNLLNNPTLKGKLITLFSVCGRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNG 156
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
+ EAL + M + + +F+ AL ACS G + G + K ++ +
Sbjct: 157 YPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVN- 215
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI---ILAERLMK 408
++ LYS G E+AL + + MP + N V SL+A K + I A R+M+
Sbjct: 216 NALLRLYSEDGCFEEALRMFDGMPHR-NLVSWNSLIAGLVKKEGVFEAIEAFRIMQ 270
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/457 (35%), Positives = 260/457 (56%), Gaps = 4/457 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + +S C + A + LH G P+H F +L+ CA+ S + LG +
Sbjct: 75 VAWATVLSA-CNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQL 133
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H ++V V ++L+DMYAKF D VFD++ SS +W AMI GY R G
Sbjct: 134 HARFLLSPFFEDDV-VKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGR 192
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE-PDYVTIISVLN 223
A+ +F E P ++ +WTAL++G V+ G +AL F EM+ GV D + + SV+
Sbjct: 193 KLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVG 252
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACAN +G +H V+ ++ + + N L+D+Y++C + A+ +F M ++ +VS
Sbjct: 253 ACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVS 312
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W SIIVG A +G EAL ++ M G KP+ V+F G + ACSH GL+ G F M
Sbjct: 313 WTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMV 372
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ + + P ++HY C++DL+SR+G L++A N++ MP+KP+E +LL+AC+ G+ +A
Sbjct: 373 EDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMA 432
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
R+ +L+DL P S+Y+LL+N+YA G W+ +R+ M + ++K PG S +++G
Sbjct: 433 VRIADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGRE 492
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F AG+ S + I ++ L +++ GYVP+T
Sbjct: 493 FQVFHAGEASQPMKDEILGLMTKLDSEMRRRGYVPDT 529
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 166/370 (44%), Gaps = 87/370 (23%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
+ID Y + G ++ A+++FD +P +D ++W +L+ +A + G++
Sbjct: 47 KTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQ 106
Query: 213 PDYVTIISVLNACANVGTLGI--GLWIH-RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
PD+ S++ ACAN+G++ + G +H R++L F+D+V V ++L+D+Y++ ++
Sbjct: 107 PDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDV-VKSSLVDMYAKFELPDYG 165
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN------------------------ 305
R VF + + + +SW ++I G+A +G EALE F
Sbjct: 166 RAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNAN 225
Query: 306 -------SMQKEGFK-PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC 357
M++EG D + + + AC+++ + E G K+++ V + + C
Sbjct: 226 DALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELG-------KQVHCVVITLGYESC 278
Query: 358 ------IVDLYSRA-------------------------------GRLEDALNVVENMPM 380
+VD+Y++ G E+AL + ++M +
Sbjct: 279 LFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVL 338
Query: 381 ---KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD---SNYVLLANMYAAVGKW 434
KPNEV L+ AC G + L K +V+ D G+ +Y L ++++ G
Sbjct: 339 AGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVE-DFGIRPSLQHYTCLLDLFSRSGHL 397
Query: 435 DGAGKIRRTM 444
D A + RTM
Sbjct: 398 DEAENLIRTM 407
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 154/379 (40%), Gaps = 107/379 (28%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMT---------------LHGTNPNHITFI----- 84
++ WT+ IS + RSGR E ALE R + + N N ++
Sbjct: 177 SISWTAMISGYARSGRKLE-ALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMR 235
Query: 85 -------------TLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF 131
+++ CA+ S LG +H +V LG + + + + AL+DMYAK
Sbjct: 236 REGVSIADPLVLSSVVGACAN--SAVRELGKQVHCVVITLGYE-SCLFISNALVDMYAKC 292
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
+ A +F MR K +W ++I G + G E A+ ++D
Sbjct: 293 SDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYD------------------ 334
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF--KDN 249
+M ++GV+P+ VT + ++ AC++VG + G + + ++ +DF + +
Sbjct: 335 -------------DMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMV-EDFGIRPS 380
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
++ L+DL+SR G ++ A + + M
Sbjct: 381 LQHYTCLLDLFSRSGHLDEAENLIRTM--------------------------------- 407
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
KPD ++ L+AC H G + +R D + + P Y + ++Y+ AG E
Sbjct: 408 -PVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDP--SSYILLSNIYAGAGMWE 464
Query: 370 DALNVVENMPMKPNEVVLG 388
+ V + M +K + V G
Sbjct: 465 NVSMVRKLMAVKEVKKVPG 483
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H ++K + TLID Y +CG ++ A ++F + ++ V+W +++ ++
Sbjct: 30 LHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNL 89
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH-- 354
+A + EG +PD F+ + AC++ G + ++ + + +SP E
Sbjct: 90 PHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVH--VKLGKQLHARFLLSPFFEDDV 147
Query: 355 -YGCIVDLYSR 364
+VD+Y++
Sbjct: 148 VKSSLVDMYAK 158
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/458 (36%), Positives = 268/458 (58%), Gaps = 6/458 (1%)
Query: 43 NPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHG-TNPNHITFITLLSGCADFPSQCLFL 100
NP + W + I +S A F M + P +T+ ++ +
Sbjct: 85 NPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLG--LAHD 142
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
GA +HG + KLGL + + T +L MYA G + A +F+ +WN+MI G
Sbjct: 143 GAQLHGRIIKLGLQFDPFIRNT-ILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLA 201
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G+I+ + ++FD+MPV++ ISW +++ G+V+ G F+EAL+ F +MQ ++P T++S
Sbjct: 202 KCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVS 261
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+LNA A +G L G+WIH Y+ K + + N V +ID+Y +CG I A QVF+++ R+
Sbjct: 262 LLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRS 321
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
L SWNS+I G AVNG EA+ F ++ KPD +SF LTAC+H ++++G+ +F
Sbjct: 322 LSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMVDEGMEFFS 381
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
MK YR+ P I+HY +VD+ SRAG LE+A ++ MP++ + ++ G LL+ACR G+
Sbjct: 382 RMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLSACRIYGNT 441
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+A+R + + +LDP YVL+AN++A + GA + R M+ + ++K+PG S IE+
Sbjct: 442 EMAKRAAEKVNELDPEETMGYVLMANIHAWGNNFVGAMEKRVAMRMKKVEKEPGGSFIEV 501
Query: 461 GSGIHEFMA-GDRSHIESEHIYSMLELLSFDLKLCGYV 497
+HEF+A G R H +++ IY +L L L+ G V
Sbjct: 502 DEEVHEFIAGGGRLHRKAQEIYIVLGQLGVMLQDKGAV 539
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 135/283 (47%), Gaps = 14/283 (4%)
Query: 129 AKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI-----SW 183
+ G MD A +VF M+ + F+WN +I G+ + + + A+ +F +M V + ++
Sbjct: 68 SPLGNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTY 127
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
++ + + G + + + G++ D ++L A G L R +
Sbjct: 128 PSIFKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEA----RRIFN 183
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
Q+ + +V N++I ++CG I+ +R++F +M + +SWNS+I G+ NG EAL+
Sbjct: 184 QEMEFDVVSWNSMILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKL 243
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F MQ+E +P + L A + G + G+ + +KK + I+D+Y
Sbjct: 244 FIKMQEERIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKK-NNLQLNAIVVTAIIDMYC 302
Query: 364 RAGRLEDALNVVENMPMKP----NEVVLGSLLAACRTKGDIIL 402
+ G + +AL V E +P + N ++ G + C + ++
Sbjct: 303 KCGSIGNALQVFEKIPCRSLSSWNSMIFGLAVNGCEKEAILVF 345
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 36/259 (13%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K V + W S I + R+G EA F +M P+ T ++LL+ A + L
Sbjct: 215 KMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQIGA--L 272
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G IH + K L N ++V TA++DMY K G + A VF+ + +S +WN+MI G
Sbjct: 273 RQGVWIHEYIKKNNLQLNAIVV-TAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFG 331
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+NG K EA+ F+ ++ S ++PD ++
Sbjct: 332 LA--------------------------VNGCEK-----EAILVFKMLESSSLKPDCISF 360
Query: 219 ISVLNACANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++VL AC + + G+ + R + ++K N ++D+ SR G +E A Q + M
Sbjct: 361 MAVLTACNHGAMVDEGMEFFSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMP 420
Query: 278 -KRTLVSWNSIIVGFAVNG 295
++ + W ++ + G
Sbjct: 421 IEKDAIIWGCLLSACRIYG 439
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/455 (35%), Positives = 265/455 (58%), Gaps = 34/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + IS + ++G +A + M P+ T ++L A++ + L G IH
Sbjct: 162 VSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVN--LLKGKEIH 219
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G + G D + V +G++L+DMYAK R+D
Sbjct: 220 GYAIRNGYDAD-VFIGSSLIDMYAKCTRVD------------------------------ 248
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ R+F +P D ISW +++ G V+ G F+E L+ F++M I+ ++P++V+ S++ AC
Sbjct: 249 -DSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPAC 307
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ TL +G +H Y+++ F NV + + L+D+Y++CG I AR +F +M +VSW
Sbjct: 308 AHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWT 367
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I+G+A++G +A+ F M+ EG KP+ V+F LTACSHAGL+++ +YF+ M +
Sbjct: 368 AMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQD 427
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
YR+ P +EHY + DL R GRLE+A + +M ++P V +LLAACR +I LAE+
Sbjct: 428 YRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEK 487
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ K L +DP YVLL+N+Y+A G+W A K+R M+ +G++KKP S IEI + +H
Sbjct: 488 VSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVH 547
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F+AGD+SH + I L++L ++ GYV +T
Sbjct: 548 AFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDT 582
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 188/461 (40%), Gaps = 102/461 (22%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
M G P+H F ++L C L G +HG + +LG+ + + AL++MY+K
Sbjct: 1 MLASGKYPDHNVFPSVLKSCTLMKD--LRFGESVHGCIIRLGMGFD-LYTCNALMNMYSK 57
Query: 131 FGRMD--------------------------------------------------LATVV 140
F ++ ++ ++
Sbjct: 58 FWSLEEGGVQRFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNIL 117
Query: 141 FDAMRVKSSFTWNAMIDGYMRRGD----IESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
+ K F D Y ++ + S ++F+ MP RD +SW +++G + G
Sbjct: 118 YQVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMH 177
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
E+AL REM + + PD T+ SVL A L G IH Y ++ + +V + ++L
Sbjct: 178 EDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSL 237
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
ID+Y++C ++ + +VF + + +SWNSII G NG E L++F M KP+
Sbjct: 238 IDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNH 297
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
VSF+ + AC+H + G + + + R + +VD+Y++ G + A + +
Sbjct: 298 VSFSSIMPACAHLTTLHLGKQLHGYIIR-SRFDGNVFIASALVDMYAKCGNIRTARWIFD 356
Query: 377 NMPM----------------------------------KPNEVVLGSLLAACRTKGDIIL 402
M + KPN V ++L AC G L
Sbjct: 357 KMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAG---L 413
Query: 403 AERLMKYLVDLD------PGVDSNYVLLANMYAAVGKWDGA 437
+ KY + PG++ +Y +A++ VG+ + A
Sbjct: 414 VDEAWKYFNSMTQDYRIIPGLE-HYAAVADLLGRVGRLEEA 453
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 168/464 (36%), Positives = 265/464 (57%), Gaps = 7/464 (1%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
V V WTS S + + G + F M G PN +T ++L CA+ L
Sbjct: 140 VVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKD--LKS 197
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G IHG + G+ N+ V +AL+ +YAK + A +VFD M + +WN ++ Y
Sbjct: 198 GKEIHGFAVRHGM-VVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 256
Query: 161 RRGDIESAVRMFDEMP---VR-DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
+ + E +F +M VR D +W A++ G ++ G EEA+E FR+MQ G +P+ +
Sbjct: 257 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 316
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
TI S+L AC+ L +G IH YV + ++ L+ +Y++CG + +R VF M
Sbjct: 317 TISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMM 376
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
++ +V+WN++I+ A++G EAL F+ M +P+ V+FTG L+ CSH+ L+E+G+
Sbjct: 377 RRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGV 436
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+ F+ M + + V P HY C+VD+YSRAGRL +A ++ MPM+P G+LLAACR
Sbjct: 437 QIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRV 496
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
++ LA+ K L +++P NYV L N+ W A ++R MK RGI K PG S
Sbjct: 497 YKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCS 556
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+++G+ +H F+ GD+S+IES+ IY+ L+ L +K+ GY P+T
Sbjct: 557 WLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDT 600
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 47/338 (13%)
Query: 126 DMYAKFGRMDLATVVFDAMRVKSS-------------FTWNAMIDGYMRRGDIESAVRMF 172
DM V DA+RVK F NA+I Y + +E A R+F
Sbjct: 77 DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 136
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
D++ VRD +SWT+L + +VK G+ + ++ FREM SGV+P+ +T+ S+L ACA + L
Sbjct: 137 DDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 196
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
G IH + ++ N+ VC+ L+ LY++C + AR VF M R +VSWN ++ +
Sbjct: 197 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 256
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
N + F M ++G + D ++ + C G E+ + F M+K
Sbjct: 257 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK-------- 308
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV- 411
M KPNE+ + S+L AC ++ + + + Y+
Sbjct: 309 -------------------------MGFKPNEITISSILPACSFSENLRMGKEIHCYVFR 343
Query: 412 DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
G ++ L MYA G + + + M+ + +
Sbjct: 344 HWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDV 381
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 13/225 (5%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD A ++FD +P D + + L++ G EA++ + +Q G++PD ++
Sbjct: 26 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 85
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
ACA G +H + +V V N LI Y +C C+E AR+VF + R +V
Sbjct: 86 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 145
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SW S+ + GF + ++ F M G KP+ ++ + L AC+ ++ G
Sbjct: 146 SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSG------- 198
Query: 343 KKIYRVSPR----IEHYGC--IVDLYSRAGRLEDALNVVENMPMK 381
K+I+ + R + + C +V LY++ + +A V + MP +
Sbjct: 199 KEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR 243
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
LI + G ARQ+F + + + +++I +G EA++ ++S+Q+ G KPD
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALN 373
F A AC+ +G D LR ++ R + + ++ Y + +E A
Sbjct: 78 MPVFLAAAKACAVSG---DALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARR 134
Query: 374 VVENMPMKPNEVVLGSLLAACRTK 397
V +++ ++ +VV + L++C K
Sbjct: 135 VFDDLVVR--DVVSWTSLSSCYVK 156
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/461 (36%), Positives = 255/461 (55%), Gaps = 41/461 (8%)
Query: 44 PTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
P W + + R+G EA L + M + F L C+D L G
Sbjct: 142 PESVWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGD--LQTGRA 199
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H V K D + V V ALL +Y++ G D
Sbjct: 200 VHAQVLKATEDPDQV-VNNALLRLYSEDGCFD---------------------------- 230
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
A+R+FD MP R+ +SW +L+ G VK+ EA+E FR MQ G+ +VT+ ++L
Sbjct: 231 ---EALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILP 287
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
CA V LG G IH ++K K + V N+L+D+Y++CG +++ R+VF M + L S
Sbjct: 288 VCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTS 347
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN++I G+A+NG + EA+E F M GF PDG++F L+ CSHAGL +DG R F++MK
Sbjct: 348 WNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMK 407
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
Y +SP +EHY C+VD+ RAGR+++AL +V+NMP KP + GSLL +CR G++ LA
Sbjct: 408 MDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLA 467
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E + K L +L+P NYV+L+N+YA G W+ +R M+ RG+ K+ G S ++I S
Sbjct: 468 EAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSK 527
Query: 464 IHEFMAGD----RSHIESEHIYSMLELLSFDLKLCGYVPET 500
IH F+AG R+ +E + ++ + L ++ GYVP+T
Sbjct: 528 IHTFVAGGSNEFRNSVEYKKVW---KRLMEAMEEVGYVPDT 565
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 16/236 (6%)
Query: 187 LNGFVKRGYFEEALEC--FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL-- 242
L K G +EAL + + PD L++C + L G ++ +L
Sbjct: 38 LKSLSKSGKLDEALRLIEYWPSKSPATAPDVEACALFLHSCISRKALEHGQRLYLQLLLY 97
Query: 243 ----KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS---WNSIIVGFAVNG 295
+ +N + LI L+S C ++ AR+VF+ + + W ++ +G++ NG
Sbjct: 98 RDRCNHNLLNNPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNG 157
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
+ EAL + M + + +F+ AL ACS G ++ G + K ++ +
Sbjct: 158 YPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVN- 216
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI---ILAERLMK 408
++ LYS G ++AL V + MP + N V SL+A K + I A R+M+
Sbjct: 217 NALLRLYSEDGCFDEALRVFDGMPHR-NVVSWNSLIAGLVKKDGVFEAIEAFRIMQ 271
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 263/448 (58%), Gaps = 38/448 (8%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V WT IS + R+G EA F RM + PN TF+++L C L +G
Sbjct: 97 VRDVVSWTGVISGYVRAGLFDEAVGLFLRMDV---EPNAATFVSVLVACGR--KGYLSVG 151
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHGL K + FG + V NA++D Y++
Sbjct: 152 KGIHGLSFK------------------SAFGV---------GLEVS-----NALMDMYVK 179
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G + A ++FDE+ +D +SWT++++G V+ +EALE F++MQ SG+EPD + + SV
Sbjct: 180 CGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSV 239
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+ACA +G L G W+H ++ ++ K ++++ ++D+Y++CGCIE + Q+F M + +
Sbjct: 240 LSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNV 299
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
++WN+++ G A++G + LE F M + G +P+ V+F LTAC H GL+ +G +YF+
Sbjct: 300 LTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNW 359
Query: 342 MK-KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
MK + Y + PR+EHYGC+VDL RA L++AL + + MPM P+ ++G+LL+AC+ G+
Sbjct: 360 MKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGNT 419
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L + ++ V+LD YVLL+N++A +WD +IRR MK +GI+K PG + IE+
Sbjct: 420 ELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPGSTVIEL 479
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLS 488
HEF+ GD H + + I +L++LS
Sbjct: 480 DGKAHEFIVGDTRHPQDKRIRLLLKILS 507
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 164/334 (49%), Gaps = 38/334 (11%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
+ + +S + R A L + R+ G P+ TF +L CA F + G +HG+
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVG--IGEGRQVHGV 59
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ K+G N+ V +L+ Y+ R GD
Sbjct: 60 IIKMGF-VCNIYVENSLVHFYSVCKRF----------------------------GD--- 87
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A R+FDEM VRD +SWT +++G+V+ G F+EA+ F M VEP+ T +SVL AC
Sbjct: 88 ASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVGLFLRMD---VEPNAATFVSVLVACGR 144
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G L +G IH K F ++V N L+D+Y +CGC+ A+QVF + ++ +VSW SI
Sbjct: 145 KGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSI 204
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G EALE F MQ G +PDG+ T L+AC+ G ++ G R+
Sbjct: 205 ISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYG-RWVHEHIDRKA 263
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ I+ +VD+Y++ G +E ++ + MP K
Sbjct: 264 IKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHK 297
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 264/479 (55%), Gaps = 28/479 (5%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA-------------D 92
+ W + R ++ +A F +M + + I++ T++SG A +
Sbjct: 205 ISWNCLMGGFVRKKKLGDARWLFDKMPVR----DAISWNTMISGYAQGGGLSQARRLFDE 260
Query: 93 FPSQCLF-LGAMIHGLVCKLGLDR----------NNVMVGTALLDMYAKFGRMDLATVVF 141
P++ +F AM+ G V LD N + A++ Y + +MD+A +F
Sbjct: 261 SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELF 320
Query: 142 DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALE 201
++M ++ +WN MI GY + GDI A + FD MP RD +SW A++ G+ + G++EEAL
Sbjct: 321 ESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALN 380
Query: 202 CFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
F E++ G + T L+ CA++ L +G IH +K + V N L+ +Y
Sbjct: 381 MFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYF 440
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
+CG I+ A F+ + ++ +VSWN+++ G+A +GF +AL F SM+ G KPD ++ G
Sbjct: 441 KCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVG 500
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+ACSH GL++ G YF M K Y V P +HY C++DL RAGRLE+A +++ NMP +
Sbjct: 501 VLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQ 560
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
P G+LL A R G+ L E+ + + ++P YVLL+N+YAA G+W A K+R
Sbjct: 561 PGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMR 620
Query: 442 RTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
M+ G+QK PG S +E+ + IH F GD SH E E IY+ LE L ++ GYV T
Sbjct: 621 SKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLT 679
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 138/547 (25%), Positives = 222/547 (40%), Gaps = 145/547 (26%)
Query: 26 TTTPQISIQTNNSKSTV-NPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITF 83
T+T + TNN+K V +P + +W +IS H R+G A F M + +++
Sbjct: 28 TSTRRSESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSS----VSY 83
Query: 84 ITLLSGC-------------ADFPSQCLF-LGAMIHGLV--CKLGLDR--------NNVM 119
++SG P + LF M+ G V C+LG R +V+
Sbjct: 84 NAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV 143
Query: 120 VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA----------- 168
+LL YA+ G +D A VFD M K+S +WN ++ Y+ G IE A
Sbjct: 144 SWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWD 203
Query: 169 -----------VR---------MFDEMPVRDAIS-------------------------- 182
VR +FD+MPVRDAIS
Sbjct: 204 LISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPT 263
Query: 183 -----WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWI 237
WTA+++G+V+ G +EA F EM E + V+ +++ + I
Sbjct: 264 RDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIA--- 316
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
R + + N+ NT+I Y + G I AR+ F M +R VSW +II G+A +G
Sbjct: 317 -RELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHY 375
Query: 298 GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-------------------- 337
EAL F ++++G + +F AL+ C+ +E G +
Sbjct: 376 EEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNAL 435
Query: 338 ---YF---------DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKP 382
YF D + I + + ++ Y+R G AL V E+M +KP
Sbjct: 436 LAMYFKCGSIDEANDTFEGI--EEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKP 493
Query: 383 NEVVLGSLLAACRTKGDIILAERLMKYLVDL--DPGV---DSNYVLLANMYAAVGKWDGA 437
+E+ + +L+AC G L +R +Y + D GV +Y + ++ G+ + A
Sbjct: 494 DEITMVGVLSACSHTG---LLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEA 550
Query: 438 GKIRRTM 444
+ R M
Sbjct: 551 QDLIRNM 557
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/384 (39%), Positives = 227/384 (59%), Gaps = 5/384 (1%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
NVM+ YA++ RMD+ +F+ M + +WN MI GY + GD+ A +FD MP
Sbjct: 285 NVMIAG-----YAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMP 339
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
RD++SW A++ G+ + G +EEA+ EM+ G + T L+ACA++ L +G
Sbjct: 340 QRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQ 399
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H V++ ++ V N L+ +Y +CGCI+ A VFQ + + +VSWN+++ G+A +GF
Sbjct: 400 VHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGF 459
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG 356
+AL F SM G KPD ++ G L+ACSH GL + G YF M K Y ++P +HY
Sbjct: 460 GRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYA 519
Query: 357 CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPG 416
C++DL RAG LE+A N++ NMP +P+ G+LL A R G++ L E+ + + ++P
Sbjct: 520 CMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPH 579
Query: 417 VDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIE 476
YVLL+N+YAA G+W K+R M+ G+QK PG S +E+ + IH F GD H E
Sbjct: 580 NSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPE 639
Query: 477 SEHIYSMLELLSFDLKLCGYVPET 500
IY+ LE L +K GYV T
Sbjct: 640 KGRIYAFLEELDLKMKHEGYVSST 663
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 170/363 (46%), Gaps = 35/363 (9%)
Query: 115 RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDE 174
RN+V A++ Y + + LA +FD M K F+WN M+ GY R + A +FD
Sbjct: 62 RNSVSY-NAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDS 120
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
MP +D +SW A+L+G+V+ G+ +EA + F M + ++ +L A G L
Sbjct: 121 MPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMP----HKNSISWNGLLAAYVRSGRLEEA 176
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
R + + + CN L+ Y + + ARQ+F ++ R L+SWN++I G+A +
Sbjct: 177 ----RRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQD 232
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
G + +A F +E D ++T + A G++++ R FD M + +S
Sbjct: 233 GDLSQARRLF----EESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMS----- 283
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
Y ++ Y++ R++ + E MP PN +++ GD+ A + L D+
Sbjct: 284 YNVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWNIMISGYCQNGDLAQA----RNLFDMM 338
Query: 415 PGVDS-NYVLLANMYAAVGKWDGAGKIRRTMKGRG-----------IQKKPGLSSIEIGS 462
P DS ++ + YA G ++ A + MK G + ++++E+G
Sbjct: 339 PQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGK 398
Query: 463 GIH 465
+H
Sbjct: 399 QVH 401
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 122/516 (23%), Positives = 207/516 (40%), Gaps = 123/516 (23%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC---ADF-------- 93
TV+ T +IS H R+G A F M L N +++ ++SG A F
Sbjct: 33 TVKCTKAISTHMRNGHCDLALCVFDAMPLR----NSVSYNAMISGYLRNAKFSLARDLFD 88
Query: 94 --PSQCLF-LGAMIHGLV-------CKLGLD---RNNVMVGTALLDMYAKFGRMDLATVV 140
P + LF M+ G ++ D +V+ A+L Y + G +D A V
Sbjct: 89 KMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDV 148
Query: 141 FDAMRVKSSFTWNAMIDGYMRRGDIESAVR------------------------------ 170
FD M K+S +WN ++ Y+R G +E A R
Sbjct: 149 FDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDAR 208
Query: 171 -MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN------ 223
+FD++PVRD ISW +++G+ + G +A F E + V + + +
Sbjct: 209 QLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDE 268
Query: 224 -------------ACANVGTLGIGLWIHRYVLKQDFKD----NVKVCNTLIDLYSRCGCI 266
NV G + + ++ F++ N+ N +I Y + G +
Sbjct: 269 ARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDL 328
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
AR +F M +R VSW +II G+A NG EA+ M+++G + +F AL+AC
Sbjct: 329 AQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSAC 388
Query: 327 SHAGLIEDGLRYF-------------------------DIMKKIYRVSPRIEH-----YG 356
+ +E G + + + Y V ++H +
Sbjct: 389 ADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWN 448
Query: 357 CIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYL--V 411
++ Y+R G AL V E+M +KP+E+ + +L+AC G L +R +Y +
Sbjct: 449 TMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTG---LTDRGTEYFHSM 505
Query: 412 DLDPGVDSN---YVLLANMYAAVGKWDGAGKIRRTM 444
+ D G+ N Y + ++ G + A + R M
Sbjct: 506 NKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNM 541
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 243 KQDFKDNVKV-CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
K F+D V C I + R G + A VF M R VS+N++I G+ N A
Sbjct: 25 KPHFEDPHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLAR 84
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
+ F+ M + D S+ LT + + D FD M + VS + ++
Sbjct: 85 DLFDKMPHK----DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVS-----WNAMLSG 135
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
Y R+G +++A +V + MP K N + LLAA G + A RL + D +
Sbjct: 136 YVRSGHVDEARDVFDRMPHK-NSISWNGLLAAYVRSGRLEEARRLFESKSDWE 187
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/446 (36%), Positives = 258/446 (57%), Gaps = 18/446 (4%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
M G P+ +T +++S CA ++ G +H + K R+++++ AL+DMYAK
Sbjct: 1 MMATGFFPDEVTLSSVMSACAGLAAE--REGRQVHAHMVKRDRLRDDMVLNNALVDMYAK 58
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
GR A +FD+M +S + +++ GY + ++E A +F +M ++ I+W L+ +
Sbjct: 59 CGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAY 118
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK--- 247
+ G EEA+ F +++ + P + T +VLNAC N+ L +G H +VLK+ F+
Sbjct: 119 AQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDF 178
Query: 248 ---DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
+V V N+L+D+Y + G I+ +VF+RM R VSWN++IVG+A NG +AL F
Sbjct: 179 GPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLF 238
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
M PD V+ G L+AC H+GL+++G R+F M + + ++P +HY C+VDL R
Sbjct: 239 ERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGR 298
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLL 424
AG L++A ++++MP +P+ V+ SLL ACR ++ L ER L +LDP YVLL
Sbjct: 299 AGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLL 358
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
+NMYA +GKW ++RR+MK RG+ K+PG S IEIGS ++ F+A D H I+S L
Sbjct: 359 SNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTL 418
Query: 485 ELLSFDL----------KLCGYVPET 500
++ ++ L Y PE
Sbjct: 419 RIIQMEMCRTSIDGIDDDLMNYCPEA 444
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 47/242 (19%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W I+ + ++G EA F ++ P H T+ +L+ C + L LG
Sbjct: 108 VIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIA--VLQLGQQA 165
Query: 105 HGLVCKLGL-----DRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
H V K G ++V VG +L+DMY K G +D VF+ M + + +WNAMI GY
Sbjct: 166 HVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGY 225
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ G ++AL F M S PD VT+I
Sbjct: 226 -------------------------------AQNGRAKDALHLFERMLCSNENPDSVTMI 254
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDF-----KDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
VL+AC + G + G H + + +D +D+ ++DL R G ++ A ++ +
Sbjct: 255 GVLSACGHSGLVDEGR-RHFHFMTEDHGITPSRDHY---TCMVDLLGRAGHLKEAEELIK 310
Query: 275 RM 276
M
Sbjct: 311 DM 312
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/434 (37%), Positives = 261/434 (60%), Gaps = 8/434 (1%)
Query: 59 GRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNV 118
G A F+ + +G +P+ T +L A + + LG IH KLG N
Sbjct: 84 GEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTN--IHLGESIHACTIKLG-SAVNE 140
Query: 119 MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR 178
VG +LL MY F M A VFD M S+ +W MI GY GD+++A +FD V+
Sbjct: 141 FVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMATVK 200
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIH 238
D W A+++G+V+ F+E L FR MQ++ VEPD I+++L+ACA++G L G+WIH
Sbjct: 201 DTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGIWIH 260
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
RY+ + ++V LID+Y++CG ++ A+ +F M +R V WN++I G A++G
Sbjct: 261 RYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDGDGE 320
Query: 299 EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCI 358
A++ F M+K G KPD ++F ACS++G++++G+R ++ M ++++ P+ EHYGC+
Sbjct: 321 GAIKLFMEMEKAGIKPDNITFIAVWXACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGCV 380
Query: 359 VDLYSRAGRLEDALNVVENMP--MKPNE--VVLGSLLAACRTKGDIILAERLMKYLVDLD 414
+DL SR GR E+A V++ +P P+E V + L+AC G AE + L L+
Sbjct: 381 IDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAERLFQLE 440
Query: 415 PGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSH 474
+ YVLL+NMYAA+GK + A ++R MK +G++K PG SSI++ ++EF+AG+++H
Sbjct: 441 RHSGA-YVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEKTH 499
Query: 475 IESEHIYSMLELLS 488
++I+ +LE L+
Sbjct: 500 RHIDNIHLVLEELN 513
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 146/351 (41%), Gaps = 70/351 (19%)
Query: 40 STVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
+TV T W + IS + ++ E F M L P+ +T+LS CA + L
Sbjct: 197 ATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGA--LD 254
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
G IH + +LGL + V T L+DMYAK G +DLA +F+ M + + WNAMI G
Sbjct: 255 TGIWIHRYLGRLGLPL-TLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGM 313
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
GD E A+++ F EM+ +G++PD +T I
Sbjct: 314 AMDGDGEGAIKL-------------------------------FMEMEKAGIKPDNITFI 342
Query: 220 SVLNACANVGTL--GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+V AC+N G + GI +W +R + + +IDL SR G E A V QR+
Sbjct: 343 AVWXACSNSGMVDEGIRIW-NRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLP 401
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
K S + V++ L+AC G +
Sbjct: 402 KTASPS------------------------------EEAVAWRAFLSACCKHGQTQQAEV 431
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
+ + ++ R S Y + ++Y+ G+ EDA V M +K E V G
Sbjct: 432 AAERLFQLERHSGA---YVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPG 479
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 115/275 (41%), Gaps = 43/275 (15%)
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R G + A ++F + + ++ + RG F A+ F + +G+ PD T+
Sbjct: 51 RNGSLSHAFKLFQHIQHPTICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPY 110
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VL A A + + +G IH +K N V N+L+ +Y + ARQVF M + +
Sbjct: 111 VLKASARMTNIHLGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELS 170
Query: 281 LVSWNSIIVGFA--------------------------VNGFV-----GEALEYFNSMQK 309
VSW +I G+A ++G+V E L F MQ
Sbjct: 171 AVSWTVMIYGYANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQL 230
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI-----YRVSPRIEHYGCIVDLYSR 364
+PD L+AC+H G ++ G+ + ++ RVS ++D+Y++
Sbjct: 231 TEVEPDEAIIVTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTG------LIDMYAK 284
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
G L+ A + M + N V ++++ GD
Sbjct: 285 CGHLDLAKYLFNEMSQRDN-VCWNAMISGMAMDGD 318
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/462 (37%), Positives = 257/462 (55%), Gaps = 36/462 (7%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K V WT IS + +SG+ +EA F +M G PN T +LL PS
Sbjct: 165 KMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSD-- 222
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G +H K G D N V VG++LLDMYA++ M A V+
Sbjct: 223 HHGRQLHAFSLKYGYDMN-VHVGSSLLDMYARWAHMREAKVI------------------ 263
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
F+ + ++ +SW AL+ G ++G E + F +M G EP + T
Sbjct: 264 -------------FNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTY 310
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
SVL ACA+ G+L G W+H +V+K + + NTLID+Y++ G I+ A++VF+R+ K
Sbjct: 311 SSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVK 369
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +VSWNSII G+A +G EAL+ F M K +P+ ++F LTACSH+GL+++G Y
Sbjct: 370 QDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYY 429
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F++MKK +++ ++ H+ +VDL RAGRL +A +E MP+KP V G+LL ACR
Sbjct: 430 FELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHK 488
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ L + + +LDP +VLL+N+YA+ G+ A K+R+ MK G++K+P S +
Sbjct: 489 NMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWV 548
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
EI + +H F+A D SH E I M E +S +K GYVP+T
Sbjct: 549 EIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDT 590
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 138/279 (49%), Gaps = 34/279 (12%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N +++ Y + G +E A +FD+MP +D +SWT L++G+ + G EAL F +M G +
Sbjct: 144 NFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ 203
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P+ T+ S+L A + G +H + LK + NV V ++L+D+Y+R + A+ +
Sbjct: 204 PNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVI 263
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F + + +VSWN++I G A G + F M ++GF+P +++ L AC+ +G +
Sbjct: 264 FNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSL 322
Query: 333 EDG--------------LRY--------------FDIMKKIYR--VSPRIEHYGCIVDLY 362
E G + Y KK++R V I + I+ Y
Sbjct: 323 EQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGY 382
Query: 363 SRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKG 398
++ G +AL + E M ++PNE+ S+L AC G
Sbjct: 383 AQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSG 421
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 111/239 (46%), Gaps = 13/239 (5%)
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
+EP+ +LN C + L G IH ++ F+D++ + N ++++Y++CG +E A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
+F +M + +VSW +I G++ +G EAL F M GF+P+ + + L A S G
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA-SGTG 219
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
+ R Y + ++D+Y+R + +A V+ N N V +L
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREA-KVIFNSLAAKNVVSWNAL 278
Query: 391 LAACRTKGDIILAERLMKYLVD-LDPGVDSNYVLLANMYAAV-------GKWDGAGKIR 441
+A KG+ E +M+ L G + + +++ A GKW A I+
Sbjct: 279 IAGHARKGE---GEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSLEQGKWVHAHVIK 334
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/459 (34%), Positives = 274/459 (59%), Gaps = 7/459 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPSQCLFLGAMI 104
V W + IS + + G EA F++M + ++ P+ T + LS CA+ + L LG I
Sbjct: 243 VSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANL--ENLKLGKQI 300
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS--SFTWNAMIDGYMRR 162
H + + D VG AL+ MY+K G +++A + + + + + A++DGY++
Sbjct: 301 HAHIIRTEFDTFGA-VGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKL 359
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GDI A R+FD + VRD ++WTA++ G+V+ G+ ++A+E FR M G +P+ T+ ++L
Sbjct: 360 GDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATML 419
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTL 281
+ +++ +L G IH + +V V N LI +Y++ G I AR VF +H KR
Sbjct: 420 SVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDT 479
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
++W S+I+ A +G EAL F M + G KPD +++ G L+AC+H GL+E G Y+++
Sbjct: 480 ITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNL 539
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M+ +++ P HY C++DL+ RAG L++A +ENMP++P+ + GSLLA+C+ ++
Sbjct: 540 MQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVE 599
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LAE + L+ ++P Y LAN+Y+A G+W+ A IR++MK +G++K G S ++I
Sbjct: 600 LAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIK 659
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ +H F D H + + IY M+ + ++K G+VP+T
Sbjct: 660 NKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDT 698
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 203/408 (49%), Gaps = 54/408 (13%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V WT+ I + + G+ A F M P T +L+ CA +CL +G +
Sbjct: 110 SVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCA--AVECLGIGRKV 167
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V K GL + + V +LL+MYAK G A +VFD M++KS+ +WN MI +M+ G
Sbjct: 168 HSFVVKHGLS-SYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGL 226
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLN 223
++ A F++M RD +SW A+++G+ + G+ EAL+ F +M + S +PD T+ S L+
Sbjct: 227 VDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALS 286
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF--------------- 268
ACAN+ L +G IH ++++ +F V N LI +YS+ G +E
Sbjct: 287 ACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDV 346
Query: 269 ------------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
AR++F + R +V+W ++IVG+ NGF +A+E F SM KE
Sbjct: 347 IAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKE 406
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR------IEHYGCIVDLYSR 364
G KP+ + L+ S ++ G ++I+ + R + ++ +Y++
Sbjct: 407 GPKPNNYTLATMLSVSSSLASLDHG-------RQIHASATRSGNASSVSVSNALITMYAK 459
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG----DIILAERLMK 408
+G + DA V + K + + S++ A G + L ER+++
Sbjct: 460 SGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLE 507
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 179/351 (50%), Gaps = 47/351 (13%)
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
F G IH + K GL V + L++ YAK G + A VFD M VKS F+WN ++ G
Sbjct: 30 FTGKSIHARIIKAGLHLG-VFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSG 88
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + G +E A R+F+EMP D++SWTA++ G+ + G FE A+ FREM V P T+
Sbjct: 89 YAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTL 148
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR---------------- 262
+VL +CA V LGIG +H +V+K + V N+L+++Y++
Sbjct: 149 TNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKL 208
Query: 263 ---------------CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
G ++ A+ F++M +R +VSWN++I G+ +GF EAL+ F+ M
Sbjct: 209 KSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKM 268
Query: 308 -QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH--YGCI----VD 360
KPD + AL+AC++ L + K+I+ R E +G + +
Sbjct: 269 LMDSSSKPDKFTLASALSACAN-------LENLKLGKQIHAHIIRTEFDTFGAVGNALIS 321
Query: 361 LYSRAGRLEDALNVVE-NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
+YS++G +E A ++E +M + + +LL GDI A R+ L
Sbjct: 322 MYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSL 372
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 41/258 (15%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V WT+ I + ++G +A F M G PN+ T T+LS + S G
Sbjct: 374 VRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLD--HG 431
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDGYM 160
IH + G + ++V V AL+ MYAK G ++ A VF+ + K + TW +MI
Sbjct: 432 RQIHASATRSG-NASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMII--- 487
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G EEAL F M +G++PD++T +
Sbjct: 488 ----------------------------ALAQHGLGEEALTLFERMLENGIKPDHITYVG 519
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN---TLIDLYSRCGCIEFARQVFQRMH 277
VL+AC +VG + G Y L Q+ + + +IDL+ R G ++ A + M
Sbjct: 520 VLSACTHVGLVEQGR--SYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMP 577
Query: 278 -KRTLVSWNSIIVGFAVN 294
+ +++W S++ V+
Sbjct: 578 IEPDVIAWGSLLASCKVH 595
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T+ WTS I + G EA F RM +G P+HIT++ +LS C +G +
Sbjct: 479 TITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTH-------VGLVE 531
Query: 105 HGLVCKLGLDRNNVMVGTA-----LLDMYAKFGRMDLATVVFDAMRVKSS-FTWNAMIDG 158
G + + ++ T ++D++ + G + A + M ++ W +++
Sbjct: 532 QGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLAS 591
Query: 159 YMRRGDIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
++E +A R+ P ++ +++AL N + G +E A + M+ GV+ D
Sbjct: 592 CKVHKNVELAEVAAERLLLIEP-ENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKD 650
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/501 (34%), Positives = 277/501 (55%), Gaps = 10/501 (1%)
Query: 7 ATILPQPFLPHQQNPNQNLTTTP-----QISIQTNNSKSTVNPTVQWTSSISRHCRSGRI 61
A I+ H+ PN L Q ++Q ++ +P V W S ++ C
Sbjct: 27 AQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDP-VAWASLLTA-CNLSNR 84
Query: 62 AEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMV 120
AL +R L G +P+H F +L+ CA+ + G +H ++V V
Sbjct: 85 PHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDV-V 143
Query: 121 GTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDA 180
++L+DMYAKFG D VFD++ +S +W MI GY R G A R+F + P R+
Sbjct: 144 KSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNL 203
Query: 181 ISWTALLNGFVKRGYFEEALECFREMQISGVE-PDYVTIISVLNACANVGTLGIGLWIHR 239
+WTAL++G V+ G +A F EM+ G+ D + + SV+ ACAN+ +G +H
Sbjct: 204 FAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHG 263
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
V+ ++ + + N LID+Y++C + A+ +F M ++ +VSW SIIVG A +G E
Sbjct: 264 VVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEE 323
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
AL ++ M G KP+ V+F G + ACSHAGL+ G F M + + +SP ++HY C++
Sbjct: 324 ALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLL 383
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
DL+SR+G L++A N++ MP+ P+E +LL++C+ G+ +A R+ +L++L P S
Sbjct: 384 DLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPS 443
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEH 479
+Y+LL+N+YA G W+ K+R+ M +K PG S I++G G H F AG+ SH +
Sbjct: 444 SYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPMRDE 503
Query: 480 IYSMLELLSFDLKLCGYVPET 500
I ++ L +++ GY P+T
Sbjct: 504 IIGLMRELDEEMRKRGYAPDT 524
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H ++K + + NTL++ Y +CG I+ A Q+F + +R V+W S++ ++
Sbjct: 25 LHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSNR 84
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
AL S+ GF PD F + AC++ G++
Sbjct: 85 PHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLH 121
>gi|225465641|ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/447 (36%), Positives = 265/447 (59%), Gaps = 11/447 (2%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
+PT+ +SI R G+ ++ F +M G P+H+T+ + A L L
Sbjct: 74 SPTISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFIAKAVARLSE--LRLA 131
Query: 102 AMIHGLVCKLGL--DRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+H + K GL DR + +L+ MY G + A VFD M +++S +WNAM+DGY
Sbjct: 132 LAVHCRIAKEGLWFDR---FIANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAMLDGY 188
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ GD++SA ++F+ MP RD +SW+++++G VK G + AL F M++ G + + VT++
Sbjct: 189 AKCGDLDSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANEVTMV 248
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ--RMH 277
SVL ACA++G L G +H+Y++ + + + +L+D+Y++CG IE A VF+ M
Sbjct: 249 SVLCACAHLGALEQGRTMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMD 308
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+ ++ WN+II G A +G V E+LE F MQ G PD +++ +AC+H GL+ +
Sbjct: 309 QTDVLMWNTIIGGLATHGLVHESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWH 368
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
+F + K V P+ EHY C+VD+ SRAG+L +A + + MPM+P +LG+LL C
Sbjct: 369 FFKSLGKQGMV-PKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNH 427
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
LAER+ + L++L+P D Y+ L+N+YA V WD A +R M+ RG++K PG S
Sbjct: 428 RRFDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSF 487
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSML 484
+E+ +H F+A D++H + E IY ML
Sbjct: 488 VEVLGTLHRFIAHDKTHNDLEKIYMML 514
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 34/257 (13%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GDI+ + R+F ++P +W +++ GF K ++ F +M GV PD++T +
Sbjct: 60 GDIDHSYRIFLQIPSPTISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFIA 119
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
A A + L + L +H + K+ + + N+LI +Y CG I AR+VF M R V
Sbjct: 120 KAVARLSELRLALAVHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSV 179
Query: 283 SWNSIIVGFA--------------------------VNGFV-----GEALEYFNSMQKEG 311
SWN+++ G+A ++G V G AL F M+ G
Sbjct: 180 SWNAMLDGYAKCGDLDSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVG 239
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIM-KKIYRVSPRIEHYGCIVDLYSRAGRLED 370
K + V+ L AC+H G +E G M R + + ++D+Y++ G +E+
Sbjct: 240 PKANEVTMVSVLCACAHLGALEQGRTMHQYMVDNTMRFTLVLR--TSLMDMYAKCGAIEE 297
Query: 371 ALNVVENMPMKPNEVVL 387
A+ V +PM +V++
Sbjct: 298 AIAVFRGVPMDQTDVLM 314
>gi|356545987|ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 613
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/464 (37%), Positives = 269/464 (57%), Gaps = 8/464 (1%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S V +V + + I+ R+GR + F M P+ TF+ LLS C+ + +
Sbjct: 140 ESPVRDSVSYNTVINGLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGI 199
Query: 99 FLGAMIHGLVC-KLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT-WNAMI 156
G ++HGLV KLG N ++ AL+DMYAK G +++A V KS W +++
Sbjct: 200 --GRVVHGLVYRKLGCFGENELLVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLV 257
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
Y RG++E A R+FD+M RD +SWTA+++G+ G F+EALE F E++ G+EPD V
Sbjct: 258 SAYALRGEVEVARRLFDQMGERDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEV 317
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFK--DNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+++ L+ACA +G L +G IH + ++ N ++D+Y++CG IE A VF
Sbjct: 318 VVVAALSACARLGALELGRRIHHKYDRDSWQCGHNRGFTCAVVDMYAKCGSIEAALDVFL 377
Query: 275 RMHK--RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
+ +T +NSI+ G A +G A+ F M+ G +PD V++ L AC H+GL+
Sbjct: 378 KTSDDMKTTFLYNSIMSGLAHHGRGEHAMALFEEMRLVGLEPDEVTYVALLCACGHSGLV 437
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
+ G R F+ M Y V+P++EHYGC+VDL RAG L +A +++NMP K N V+ +LL+
Sbjct: 438 DHGKRLFESMLSEYGVNPQMEHYGCMVDLLGRAGHLNEAYLLIQNMPFKANAVIWRALLS 497
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
AC+ GD+ LA + L+ ++ + YV+L+NM + K D A +RR + GIQK
Sbjct: 498 ACKVDGDVELARLASQELLAMENDHGARYVMLSNMLTLMDKHDEAASVRRAIDNVGIQKP 557
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGY 496
PG S +E+ +H+F+AGD+SH E++ ML + LK G+
Sbjct: 558 PGWSHVEMNGTLHKFLAGDKSHPEAKATEFMLRDIDMGLKSIGH 601
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 146/279 (52%), Gaps = 41/279 (14%)
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR 193
+ + T VF + + F NA++ Y GD +A R+FDE PVRD++S+ ++NG V+
Sbjct: 100 LQVHTHVFKSGFESNVFVVNALLQVYFVFGDARNACRVFDESPVRDSVSYNTVINGLVRA 159
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ--DFKDNVK 251
G ++ F EM+ VEPD T +++L+AC+ + GIG +H V ++ F +N
Sbjct: 160 GRAGCSMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRVVHGLVYRKLGCFGENEL 219
Query: 252 VCNTLIDLYSRCGC--------------------------------IEFARQVFQRMHKR 279
+ N L+D+Y++CGC +E AR++F +M +R
Sbjct: 220 LVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVEVARRLFDQMGER 279
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+VSW ++I G+ G EALE F ++ G +PD V AL+AC+ G +E G R
Sbjct: 280 DVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALSACARLGALELGRR-- 337
Query: 340 DIMKKIYRVSPRIEH---YGC-IVDLYSRAGRLEDALNV 374
I K R S + H + C +VD+Y++ G +E AL+V
Sbjct: 338 -IHHKYDRDSWQCGHNRGFTCAVVDMYAKCGSIEAALDV 375
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 119/253 (47%), Gaps = 15/253 (5%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG--VEPDYVTIISVLNACANV 228
+F ++P D + ++ F AL +++M S + PD T +L +CA +
Sbjct: 34 LFTQIPNPDLFLFNLIIRAFSLSQTPHNALSLYKKMLSSSPPIFPDTFTFPFLLKSCAKL 93
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
+GL +H +V K F+ NV V N L+ +Y G A +VF R VS+N++I
Sbjct: 94 SLPRLGLQVHTHVFKSGFESNVFVVNALLQVYFVFGDARNACRVFDESPVRDSVSYNTVI 153
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
G G G ++ F M+ +PD +F L+ACS L+ED + +YR
Sbjct: 154 NGLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLSACS---LLEDRGIGRVVHGLVYR- 209
Query: 349 SPRIEHYG-------CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
++ +G +VD+Y++ G LE A VV N K SL++A +G++
Sbjct: 210 --KLGCFGENELLVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVE 267
Query: 402 LAERLMKYLVDLD 414
+A RL + + D
Sbjct: 268 VARRLFDQMGERD 280
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/460 (36%), Positives = 255/460 (55%), Gaps = 33/460 (7%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T WT+ S + R + E ALE R N F + A Q L L
Sbjct: 182 TERDNFSWTAMTSGYVRHDQ-HEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHL 240
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G IHG + ++GLD + V+ W+A+ D Y
Sbjct: 241 GKEIHGHILRIGLDLDGVV--------------------------------WSALSDMYG 268
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G I A +FD+ RD +SWTA+++ + K G EE F ++ SG+ P+ T
Sbjct: 269 KCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSG 328
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VLNACA+ +G +H Y+ + F + +TL+ +Y++CG I+ AR+VF M +
Sbjct: 329 VLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPD 388
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
LVSW S+I G+A NG EAL++F + K G +PD ++F G L+AC+HAGL++ GL YFD
Sbjct: 389 LVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFD 448
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+K+ + ++ +HY C++DL SR+GRL++A ++++ MP++P++ + SLL CR G++
Sbjct: 449 SIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNL 508
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
LA+R + L +++P + Y LAN+YA G W G ++R+ M RG+ KKPGLS IEI
Sbjct: 509 KLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKKPGLSWIEI 568
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F+ GD SH +S+ I+ L LS +K GYVP+T
Sbjct: 569 KREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPDT 608
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 198/429 (46%), Gaps = 23/429 (5%)
Query: 14 FLPHQQNPNQNLTTTPQIS---IQTNNSKSTVNPTV--------QWTSSISRHCRSGRIA 62
F P + + + T+ PQ+S I KS + + +I C R+
Sbjct: 16 FSPRRAICSSSTTSQPQLSKPPIHNTFFKSGAKDELVKRLCKDNNFKEAIDILCEQKRLR 75
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
EA ++ H P+ T+ TLL C + L G +H G V++
Sbjct: 76 EA----IQILDHVDRPSAATYSTLLQLCLQL--RALDEGMKVHAHTKTSGF-VPGVVISN 128
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
+LDMY K + A +FD M + +WN MI GY + G ++ A ++FD+M RD S
Sbjct: 129 RILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFS 188
Query: 183 WTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
WTA+ +G+V+ EEALE FR MQ + + T+ S L A A + +L +G IH ++
Sbjct: 189 WTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHI 248
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
L+ + V + L D+Y +CG I AR +F + R +VSW ++I + G E
Sbjct: 249 LRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGF 308
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
F+ + K G P+ +F+G L AC+ E G + M +I P +V +
Sbjct: 309 ALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRI-GFDPSSFAASTLVHM 367
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
Y++ G +++A V MP +P+ V SL++ G A + + L L G ++
Sbjct: 368 YTKCGNIKNARRVFNGMP-RPDLVSWTSLISGYAQNGQPDEALQFFELL--LKSGTQPDH 424
Query: 422 VLLANMYAA 430
+ + +A
Sbjct: 425 ITFVGVLSA 433
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/452 (36%), Positives = 268/452 (59%), Gaps = 12/452 (2%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
T+ I +C+ GR+ EA + F M N +++ T+++G +Q + + + +
Sbjct: 257 TNMIGGYCQVGRLVEARMLFDEMPRR----NVVSWTTMITGYVQ--NQQVDIARKLFEV- 309
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
+ N + TA+L Y GR+D A+ +F+AM +KS NAMI + + G++ A
Sbjct: 310 ----MPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKA 365
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
++FD+M +D +W+A++ + ++G +ALE FR MQ G+ P++ ++ISVL+ CA +
Sbjct: 366 RQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGL 425
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
L G IH +++ F +V V + L+ +Y +CG + A+QVF R + +V WNSII
Sbjct: 426 ANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSII 485
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
G+A +G EAL F+ M G PD V+F G L+ACS+ G ++ GL F+ M+ Y+V
Sbjct: 486 TGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQV 545
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
+IEHY C+VDL RAG+L +A++++E MPM+ + ++ G+LL ACRT + LAE K
Sbjct: 546 EQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAK 605
Query: 409 YLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFM 468
L+ L+P ++LL+N+YA+ G+WD ++RR M+ R + K PG S I + +H+F
Sbjct: 606 KLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFT 665
Query: 469 AGDRS-HIESEHIYSMLELLSFDLKLCGYVPE 499
GD S H E I +LE LS L+ GY P+
Sbjct: 666 GGDSSGHPEHSEINRILEWLSGLLREAGYYPD 697
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 193/419 (46%), Gaps = 40/419 (9%)
Query: 90 CADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS 149
C P +F G M LV N ++ +L+ Y++ G+++ A VVFD MR K+
Sbjct: 70 CFSQPGYSMFSGLMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNI 129
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
+WN+++ GY + + A MFD+M R+ ISW L++G++ G EA E F M
Sbjct: 130 ISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMP-- 187
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
E + V+ +++ G + + Q + NV ++ + G I+ A
Sbjct: 188 --ERNVVSWTAMVRGYVKEGMISEA----ETLFWQMPEKNVVSWTVMLGGLLQEGRIDEA 241
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
++F M ++ +V+ ++I G+ G + EA F+ M + VS+T +T
Sbjct: 242 CRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNV----VSWTTMIT----- 292
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEH--YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
G +++ + DI +K++ V P + ++ Y+ GRL++A + MP+K + V
Sbjct: 293 GYVQN--QQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIK-SVVAC 349
Query: 388 GSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447
+++ G++ A ++ + + D G + + +Y G A ++ R M+
Sbjct: 350 NAMILCFGQNGEVPKARQVFDQMREKDEGT---WSAMIKVYERKGLELDALELFRMMQRE 406
Query: 448 GIQKK-----------PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCG 495
GI+ GL++++ G IH + RS + + +Y LLS +K CG
Sbjct: 407 GIRPNFPSLISVLSVCAGLANLDHGREIHAQLV--RSQFDLD-VYVASVLLSMYIK-CG 461
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 98/230 (42%), Gaps = 35/230 (15%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W++ I + R G +A F M G PN + I++LS CA + L G IH
Sbjct: 380 WSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLAN--LDHGREIHAQ 437
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ + D +V V + LL MY K G + A VFD VK WN++I GY
Sbjct: 438 LVRSQFDL-DVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGY-------- 488
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+ G EAL F +M SG+ PD VT + VL+AC+
Sbjct: 489 -----------------------AQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSY 525
Query: 228 VGTLGIGLWIHRYV-LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
G + GL I + K + ++ ++DL R G + A + ++M
Sbjct: 526 TGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKM 575
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 77/176 (43%), Gaps = 16/176 (9%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
V V W S I+ + + G EA F M G P+ +TF+ +LS C+ +
Sbjct: 474 AVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS-------YT 526
Query: 101 GAMIHGLVCKLGLD-----RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS-SFTWNA 154
G + GL ++ + ++D+ + G+++ A + + M +++ + W A
Sbjct: 527 GNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGA 586
Query: 155 MIDG---YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ 207
++ +M+ E A + + ++A + L N + +G +++ E R M+
Sbjct: 587 LLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMR 642
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/452 (36%), Positives = 268/452 (59%), Gaps = 12/452 (2%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
T+ I +C+ GR+ EA + F M N +++ T+++G +Q + + + +
Sbjct: 257 TNMIGGYCQVGRLVEARMLFDEMPRR----NVVSWTTMITGYVQ--NQQVDIARKLFEV- 309
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
+ N + TA+L Y GR+D A+ +F+AM +KS NAMI + + G++ A
Sbjct: 310 ----MPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKA 365
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
++FD+M +D +W+A++ + ++G +ALE FR MQ G+ P++ ++ISVL+ CA +
Sbjct: 366 RQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGL 425
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
L G IH +++ F +V V + L+ +Y +CG + A+QVF R + +V WNSII
Sbjct: 426 ANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSII 485
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
G+A +G EAL F+ M G PD V+F G L+ACS+ G ++ GL F+ M+ Y+V
Sbjct: 486 TGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQV 545
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
+IEHY C+VDL RAG+L +A++++E MPM+ + ++ G+LL ACRT + LAE K
Sbjct: 546 EQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAK 605
Query: 409 YLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFM 468
L+ L+P ++LL+N+YA+ G+WD ++RR M+ R + K PG S I + +H+F
Sbjct: 606 KLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFT 665
Query: 469 AGDRS-HIESEHIYSMLELLSFDLKLCGYVPE 499
GD S H E I +LE LS L+ GY P+
Sbjct: 666 GGDSSGHPEHSEINRILEWLSGLLREAGYYPD 697
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 193/419 (46%), Gaps = 40/419 (9%)
Query: 90 CADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS 149
C P +F G M LV N ++ +L+ Y++ G+++ A VVFD MR K+
Sbjct: 70 CFSQPGYSMFSGLMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNI 129
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
+WN+++ GY + + A MFD+M R+ ISW L++G++ G EA E F M
Sbjct: 130 ISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMP-- 187
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
E + V+ +++ G + + Q + NV ++ + G I+ A
Sbjct: 188 --ERNVVSWTAMVRGYVKEGMISEA----ETLFWQMPEKNVVSWTVMLGGLLQEGRIDEA 241
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
++F M ++ +V+ ++I G+ G + EA F+ M + VS+T +T
Sbjct: 242 CRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNV----VSWTTMIT----- 292
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEH--YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
G +++ + DI +K++ V P + ++ Y+ GRL++A + MP+K + V
Sbjct: 293 GYVQN--QQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIK-SVVAC 349
Query: 388 GSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447
+++ G++ A ++ + + D G + + +Y G A ++ R M+
Sbjct: 350 NAMILCFGQNGEVPKARQVFDQMREKDEGT---WSAMIKVYERKGLELDALELFRMMQRE 406
Query: 448 GIQKK-----------PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCG 495
GI+ GL++++ G IH + RS + + +Y LLS +K CG
Sbjct: 407 GIRPNFPSLISVLSVCAGLANLDHGREIHAQLV--RSQFDLD-VYVASVLLSMYIK-CG 461
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 98/230 (42%), Gaps = 35/230 (15%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W++ I + R G +A F M G PN + I++LS CA + L G IH
Sbjct: 380 WSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLAN--LDHGREIHAQ 437
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ + D +V V + LL MY K G + A VFD VK WN++I GY
Sbjct: 438 LVRSQFDL-DVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGY-------- 488
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+ G EAL F +M SG+ PD VT + VL+AC+
Sbjct: 489 -----------------------AQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSY 525
Query: 228 VGTLGIGLWIHRYV-LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
G + GL I + K + ++ ++DL R G + A + ++M
Sbjct: 526 TGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKM 575
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 58/153 (37%), Gaps = 44/153 (28%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
V V W S I+ + + G EA F M G P+ +TF+ +LS C+ +
Sbjct: 474 AVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS-------YT 526
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT-----WNAM 155
G + GL +F++M K + M
Sbjct: 527 GNVKKGL-------------------------------EIFNSMETKYQVEQKIEHYACM 555
Query: 156 IDGYMRRGDIESAVRMFDEMPVR-DAISWTALL 187
+D R G + A+ + ++MP+ DAI W ALL
Sbjct: 556 VDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 264/479 (55%), Gaps = 28/479 (5%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA-------------D 92
+ W + R ++ +A F +M + + I++ T++SG A +
Sbjct: 205 ISWNCLMGGFVRKKKLGDARWLFDKMPVR----DAISWNTMISGYAQGGGLSQARRLFDE 260
Query: 93 FPSQCLF-LGAMIHGLVCKLGLDR----------NNVMVGTALLDMYAKFGRMDLATVVF 141
P++ +F AM+ G V LD N + A++ Y + +MD+A +F
Sbjct: 261 SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELF 320
Query: 142 DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALE 201
++M ++ +WN MI GY + GDI A + FD MP RD +SW A++ G+ + G++EEAL
Sbjct: 321 ESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALN 380
Query: 202 CFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
F E++ G + T L+ CA++ L +G IH +K + V N L+ +Y
Sbjct: 381 MFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYF 440
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
+CG I+ A F+ + ++ +VSWN+++ G+A +GF +AL F SM+ G KPD ++ G
Sbjct: 441 KCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVG 500
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+ACSH GL++ G YF M K Y V P +HY C++DL RAGRLE+A +++ NMP +
Sbjct: 501 VLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQ 560
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
P G+LL A R G+ L E+ + + ++P YVLL+N+YAA G+W A K+R
Sbjct: 561 PGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMR 620
Query: 442 RTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
M+ G+QK PG S +E+ + IH F GD SH E E IY+ LE L ++ GYV T
Sbjct: 621 SKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLT 679
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 139/553 (25%), Positives = 223/553 (40%), Gaps = 145/553 (26%)
Query: 20 NPNQNLTTTPQISIQTNNSKSTV-NPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTN 77
N T+T + TNN+K V +P + +W +IS H R+G A F M +
Sbjct: 22 NFGHTSTSTRRSESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSS- 80
Query: 78 PNHITFITLLSGCA-------------DFPSQCLF-LGAMIHGLV--CKLGLDR------ 115
+++ ++SG P + LF M+ G V C+LG R
Sbjct: 81 ---VSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLM 137
Query: 116 --NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA----- 168
+V+ +LL YA+ G +D A VFD M K+S +WN ++ Y+ G IE A
Sbjct: 138 PEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE 197
Query: 169 -----------------VR---------MFDEMPVRDAIS-------------------- 182
VR +FD+MPVRDAIS
Sbjct: 198 SKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRL 257
Query: 183 -----------WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTL 231
WTA+++G+V+ G +EA F EM E + V+ +++ +
Sbjct: 258 FDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKM 313
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
I R + + N+ NT+I Y + G I AR+ F M +R VSW +II G+
Sbjct: 314 DIA----RELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGY 369
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-------------- 337
A +G EAL F ++++G + +F AL+ C+ +E G +
Sbjct: 370 AQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGC 429
Query: 338 ---------YF---------DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
YF D + I + + ++ Y+R G AL V E+M
Sbjct: 430 FVGNALLAMYFKCGSIDEANDTFEGI--EEKDVVSWNTMLAGYARHGFGRQALTVFESMK 487
Query: 380 ---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL--DPGV---DSNYVLLANMYAAV 431
+KP+E+ + +L+AC G L +R +Y + D GV +Y + ++
Sbjct: 488 TAGVKPDEITMVGVLSACSHTG---LLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRA 544
Query: 432 GKWDGAGKIRRTM 444
G+ + A + R M
Sbjct: 545 GRLEEAQDLIRNM 557
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 71/166 (42%), Gaps = 41/166 (24%)
Query: 328 HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
+ GL++ G YF M + Y V+P +HY C++DL R RLE+
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 388 GSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447
G+LL A R G+ L E+ + + P + G K+R
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGP-----------------QNSGISKMRDV---- 857
Query: 448 GIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493
G+QK PG S E+ + IH F G E E+I + EL DLK+
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVGLFLSRERENIGFLEEL---DLKM 900
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/462 (36%), Positives = 262/462 (56%), Gaps = 34/462 (7%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K V V WT I + + I +A F M G P+ IT+I +++ CA S L
Sbjct: 323 KMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACA--SSADL 380
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
L IH V + G +++V TAL+ MYAK G
Sbjct: 381 SLAREIHSQVVRAGFG-TDLLVDTALVHMYAKCG-------------------------- 413
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
I+ A ++FD M RD +SW+A++ +V+ G EEA E F M+ + VEPD VT
Sbjct: 414 -----AIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTY 468
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
I++LNAC ++G L +G+ I+ +K D ++ V N LI++ + G IE AR +F+ M +
Sbjct: 469 INLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQ 528
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R +V+WN +I G++++G EAL+ F+ M KE F+P+ V+F G L+ACS AG +E+G R+
Sbjct: 529 RDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRF 588
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F + + P +E YGC+VDL RAG L++A ++ MP+KPN + +LLAACR G
Sbjct: 589 FSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYG 648
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ +AER + + +P + YV L++MYAA G W+ K+R+ M+ RG++K+ G + I
Sbjct: 649 NLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWI 708
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
E+ +H F+ DRSH ++ IY+ L L +K GY+P T
Sbjct: 709 EVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVT 750
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 186/394 (47%), Gaps = 67/394 (17%)
Query: 52 ISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKL 111
I + +SG +A F RM G PN I+F+++L GC+ + L G +H
Sbjct: 235 IGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCS--TPEALAWGKAVHAQCMNT 292
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
GL ++V V TAL+ MY M G IE A R+
Sbjct: 293 GL-VDDVRVATALIRMY-------------------------------MGCGSIEGARRV 320
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTL 231
FD+M VRD +SWT ++ G+ + E+A F MQ G++PD +T I ++NACA+ L
Sbjct: 321 FDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADL 380
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
+ IH V++ F ++ V L+ +Y++CG I+ ARQVF M +R +VSW+++I +
Sbjct: 381 SLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAY 440
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF------DIMKKI 345
NG EA E F+ M++ +PD V++ L AC H G ++ G+ + D++ I
Sbjct: 441 VENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHI 500
Query: 346 ----YRVSPRIEH--------------------YGCIVDLYSRAGRLEDALNVVENM--- 378
++ ++H + ++ YS G +AL++ + M
Sbjct: 501 PVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKE 560
Query: 379 PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD 412
+PN V +L+AC G + R YL+D
Sbjct: 561 RFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLD 594
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 164/359 (45%), Gaps = 46/359 (12%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
+ N +I + G++ A + FD + + ++W A++ G+ + G+ +EA FR+M
Sbjct: 97 YELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDE 156
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
+EP +T + VL+AC++ L +G H V+K F + ++ L+ +Y + G ++ A
Sbjct: 157 AMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGA 216
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-- 327
RQVF ++KR + ++N +I G+A +G +A + F MQ+EGFKP+ +SF L CS
Sbjct: 217 RQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTP 276
Query: 328 ---------HA------------------------GLIEDGLRYFDIMKKIYRVSPRIEH 354
HA G IE R FD MK VS
Sbjct: 277 EALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVS----- 331
Query: 355 YGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
+ ++ Y+ +EDA + M ++P+ + ++ AC + D+ LA + +V
Sbjct: 332 WTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVV 391
Query: 412 DLDPGVDSNY-VLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL--SSIEIGSGIHEF 467
G D L +MYA G A ++ M R + + + +E G G F
Sbjct: 392 RAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAF 450
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 119/278 (42%), Gaps = 50/278 (17%)
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
D T + + C + G+G + ++++ + N+ NTLI L+S CG + ARQ F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS------ 327
+ +T+V+WN+II G+A G V EA F M E +P ++F L ACS
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 328 -----HAGLIE-----------------------DGLRYFDIMKKIYRVSPRIEHYGCIV 359
HA +I+ DG R + +Y+ + + ++
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGAR--QVFDGLYKRD--VSTFNVMI 235
Query: 360 DLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTK-----GDIILAERLMKYLV 411
Y+++G E A + M KPN + S+L C T G + A+ + LV
Sbjct: 236 GGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLV 295
Query: 412 DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
D D V + L MY G +GA ++ MK R +
Sbjct: 296 D-DVRVAT---ALIRMYMGCGSIEGARRVFDKMKVRDV 329
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 255/457 (55%), Gaps = 13/457 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V WTS +S H R G E F M G +LS CAD + G I
Sbjct: 233 SVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAE--VDWGKEI 290
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG V K G + + + V AL+ Y K M A VF ++ K+ +WNA+I Y G
Sbjct: 291 HGYVVKGGYE-DYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGL 349
Query: 165 IESAVRMFDEMPVRDA----------ISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+ A F M D+ ISW+A+++GF +G E++LE FR+MQ++ V +
Sbjct: 350 CDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMAN 409
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
VTI SVL+ CA + L +G +H Y ++ DN+ V N LI++Y +CG + VF
Sbjct: 410 CVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFD 469
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
+ R L+SWNS+I G+ ++G AL FN M + KPD ++F L+ACSHAGL+
Sbjct: 470 NIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAILSACSHAGLVAA 529
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
G FD M +R+ P +EHY C+VDL RAG L++A ++V NMP++PNE V G+LL +C
Sbjct: 530 GRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRNMPIEPNEYVWGALLNSC 589
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPG 454
R D+ + E ++ L + +++LL+N+YAA G+WD + ++R + + +G++K PG
Sbjct: 590 RMYKDMDIVEETASQILTLKSKITGSFMLLSNIYAANGRWDDSARVRVSARTKGLKKIPG 649
Query: 455 LSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
S IE+ ++ F AG+ H E IY +LE L+ +
Sbjct: 650 QSWIEVRKKVYTFSAGNLVHFGLEDIYVILEELNLHM 686
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 157/313 (50%), Gaps = 13/313 (4%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
+++ + W S I + G A + M G P+ T ++ C+ S +L
Sbjct: 93 SLHHLLLWNSIIRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSS--YL 150
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
++H ++G RN++ V L+ MY K GRM+ A +FD M V+S +WN M+ GY
Sbjct: 151 CRIVHCHALQMGF-RNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYA 209
Query: 161 RRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
D A R+F M + ++++WT+LL+ + G ++E LE F+ M+ G+E
Sbjct: 210 LNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAE 269
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+ VL+ CA++ + G IH YV+K ++D + V N LI Y + + A +VF +
Sbjct: 270 ALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEI 329
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG------FKPDGVSFTGALTACSHAG 330
+ LVSWN++I +A +G EA F M+K +P+ +S++ ++ ++ G
Sbjct: 330 KNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKG 389
Query: 331 LIEDGLRYFDIMK 343
E L F M+
Sbjct: 390 RGEKSLELFRQMQ 402
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 111/192 (57%), Gaps = 3/192 (1%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDA---ISWTALLNGFVKRGYFEEALECFREMQISGV 211
+I Y R + A ++FD +P+ + W +++ V GY + ALE + EM+ G
Sbjct: 69 LIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVEMRKLGF 128
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
PD T+ V+ AC+++G+ + +H + L+ F++++ V N L+ +Y + G +E ARQ
Sbjct: 129 LPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQ 188
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
+F M R++VSWN+++ G+A+N A F M+ EG +P+ V++T L++ + GL
Sbjct: 189 LFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGL 248
Query: 332 IEDGLRYFDIMK 343
++ L F +M+
Sbjct: 249 YDETLELFKVMR 260
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 34/213 (15%)
Query: 256 LIDLYSRCGCIEFARQVF-----QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
LI +Y+R + AR+VF + +H L+ WNSII +G+ ALE + M+K
Sbjct: 69 LIAVYARFAFLSHARKVFDAIPLESLHH--LLLWNSIIRANVSHGYHQHALELYVEMRKL 126
Query: 311 GFKPDGVSFTGALTACS-----------HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
GF PDG + + ACS H ++ G R ++ V+ +V
Sbjct: 127 GFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFR-----NHLHVVNE-------LV 174
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKY--LVDLDPGV 417
+Y + GR+EDA + + M ++ + V ++++ D + A R+ K L L P
Sbjct: 175 GMYGKLGRMEDARQLFDGMFVR-SIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNS 233
Query: 418 DSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
+ LL++ +A G +D ++ + M+ RGI+
Sbjct: 234 VTWTSLLSS-HARCGLYDETLELFKVMRTRGIE 265
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/454 (37%), Positives = 251/454 (55%), Gaps = 35/454 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WTS I+ + ++ AEA M PN TF +LL + +G IH
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSG--IGGQIH 175
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L K +V VG+ALLDMYA+ G+MD+AT VFD + K+ +WNA+I G+ R+GD
Sbjct: 176 ALAVKCDW-HEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDG 234
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E+ AL F EMQ +G E + T S+ +A
Sbjct: 235 ET-------------------------------ALMVFAEMQRNGFEATHFTYSSIFSAL 263
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A +G L G W+H +++K K V NT++D+Y++ G + AR+VF+R+ + LV+WN
Sbjct: 264 AGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWN 323
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S++ FA G EA+ +F M+K G + +SF LTACSH GL+++G YFD++K+
Sbjct: 324 SMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKE- 382
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P IEHY +VDL RAG L AL + MPM+P V G+LLAACR + + +
Sbjct: 383 YNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQF 442
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
++ LDP VLL N+YA+ G WD A ++R+ MK G++K+P S +EI + +H
Sbjct: 443 AADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVH 502
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
F+A D +H +E IY M + +S ++ GYVP+
Sbjct: 503 MFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPD 536
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 134/251 (53%), Gaps = 4/251 (1%)
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
+F N++I Y + G + A ++FD+M +D +SWT+L+ G+ + EA+ M
Sbjct: 86 AFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLK 145
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
+P+ T S+L A GIG IH +K D+ ++V V + L+D+Y+RCG ++
Sbjct: 146 GRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDM 205
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
A VF ++ + VSWN++I GFA G AL F MQ+ GF+ +++ +A +
Sbjct: 206 ATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAG 265
Query: 329 AGLIEDG-LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
G +E G + ++K +++ + + ++D+Y+++G + DA V E + + + V
Sbjct: 266 IGALEQGKWVHAHMIKSRQKLTAFVGN--TMLDMYAKSGSMIDARKVFERV-LNKDLVTW 322
Query: 388 GSLLAACRTKG 398
S+L A G
Sbjct: 323 NSMLTAFAQYG 333
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 24/240 (10%)
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+ + ACA L IH ++ F + + N+LI LY +CG + A +VF +M +
Sbjct: 56 AFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNK 115
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+VSW S+I G+A N EA+ M K FKP+G +F L A G D
Sbjct: 116 DMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAV---GAYADS---- 168
Query: 340 DIMKKIYRVSPRIEHY------GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
I +I+ ++ + + + ++D+Y+R G+++ A V + + K N V +L++
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK-NGVSWNALISG 227
Query: 394 CRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAV--------GKWDGAGKIRRTMK 445
KGD A LM + G ++ + +++++A+ GKW A I+ K
Sbjct: 228 FARKGDGETA--LMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQK 285
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 265/461 (57%), Gaps = 28/461 (6%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W++ I+ + + G EA F +M L+G+ PN +T I+LLS CA LGA+
Sbjct: 361 ITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACAS-------LGALSQ 413
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G+ + + + LL + FG + NA+ID Y +
Sbjct: 414 GM------ETHAYSLKKCLLSLDNDFGGDGDGEDLV---------VHNALIDMYSKCRSF 458
Query: 166 ESAVRMFDEMPVRD--AISWTALLNGFVKRGYFEEALECFREM--QISGVEPDYVTIISV 221
++A +F+ +P R+ ++WT ++ G+ + G +AL+ F EM + V P+ TI +
Sbjct: 459 KAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCI 518
Query: 222 LNACANVGTLGIGLWIHRYVLKQ-DFKDNVK-VCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACA++ +L +G IH YV + +++ +V V N LID+YS+CG ++ AR VF M KR
Sbjct: 519 LMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKR 578
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
VSW S++ G+ ++G EAL+ F+ MQK GF PD +SF L ACSH+G+++ GL YF
Sbjct: 579 NEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYF 638
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
DIM+ Y V +HY C++DL +R+GRL+ A ++ MPM+P+ + +LL+ACR +
Sbjct: 639 DIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSN 698
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ LAE + LV + D +Y L++N+YA +W +IR+ MK GI+K+PG S ++
Sbjct: 699 VELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQ 758
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
G F GDRSH S IYS+LE L +K+ GYVPET
Sbjct: 759 GKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPET 799
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 200/389 (51%), Gaps = 45/389 (11%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMT--LHGTNPNH----ITFITLLSGCA 91
++ ++ + W S ++ H + A F+ MT +H N I+ + +L CA
Sbjct: 211 TRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACA 270
Query: 92 DFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT 151
+ L IH + G + V AL+D YAK G M A VF+ M K +
Sbjct: 271 SL--KALPQTKEIHSYAIRNG-TFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVS 327
Query: 152 WNAMIDGYMRRGDIESAVRMFDEM-----PVRDAISWTALLNGFVKRGYFEEALECFREM 206
WNAM+ GY + G +A +F M P+ D I+W+A++ G+ +RGY +EAL+ F++M
Sbjct: 328 WNAMVTGYTQSGKFGAAFELFKNMRKENIPL-DVITWSAVIAGYAQRGYGQEALDTFQQM 386
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ------------DFKDNVKVCN 254
+ G EP+ VTIIS+L+ACA++G L G+ H Y LK+ +++ V N
Sbjct: 387 ILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHN 446
Query: 255 TLIDLYSRCGCIEFARQVFQRM--HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
LID+YS+C + AR +F + +R +V+W +I G+A G +AL+ F+ M + +
Sbjct: 447 ALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPY 506
Query: 313 --KPDGVSFTGALTACSHAGLIEDG-------LRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
P+ + + L AC+H + G R+ + +Y V+ C++D+YS
Sbjct: 507 AVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVA------NCLIDMYS 560
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLA 392
+ G ++ A NV ++MP K NEV S+++
Sbjct: 561 KCGDVDTARNVFDSMP-KRNEVSWTSMMS 588
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 123/513 (23%), Positives = 211/513 (41%), Gaps = 121/513 (23%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
+P V W + H GR+ A RM GT P+H T L C + PS G+
Sbjct: 112 SPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPS--YRSGS 169
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK---SSFTWNAMIDGY 159
HGL+C G + +NV V AL+ MY++ G ++ A++VFD + K +WN+++ +
Sbjct: 170 AFHGLICCNGFE-SNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAH 228
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
++ + +A+ +F EM T +++ E+A + D ++I+
Sbjct: 229 VKGSNPRTALDLFSEM--------TTIVH--------EKA---------TNERSDIISIV 263
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
++L ACA++ L IH Y ++ + VCN LID Y++CG ++ A VF M +
Sbjct: 264 NILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFK 323
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKE----------------------------- 310
+VSWN+++ G+ +G G A E F +M+KE
Sbjct: 324 DVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTF 383
Query: 311 ------GFKPDGVSFTGALTACSHAGLIEDGL---------------------------- 336
G +P+ V+ L+AC+ G + G+
Sbjct: 384 QQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLV 443
Query: 337 ------------RYFDIMKKIYRVSPRIEH----YGCIVDLYSRAGRLEDALNVVENMPM 380
R F + I+ PR E + ++ Y++ G DAL + M
Sbjct: 444 VHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMIS 503
Query: 381 K-----PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVG 432
K PN + +L AC + + +++ Y+ S Y + L +MY+ G
Sbjct: 504 KPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCG 563
Query: 433 KWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
D A + +M R + +S+ G G+H
Sbjct: 564 DVDTARNVFDSMPKR---NEVSWTSMMSGYGMH 593
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 22/242 (9%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
++ Y+ G A+ + + + A+ W L+ ++ G + A+ M +G +PD
Sbjct: 89 VVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPD 148
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+ T+ L AC + + G H + F+ NV VCN L+ +YSR G +E A VF
Sbjct: 149 HFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFD 208
Query: 275 RMHKR---TLVSWNSIIVGFAVNGFVGEALEYFNSM------QKEGFKPDGVSFTGALTA 325
+ ++ ++SWNSI+ AL+ F+ M + + D +S L A
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPA 268
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPR----IEHYGC--IVDLYSRAGRLEDALNVVENMP 379
C+ L+ K+I+ + R + + C ++D Y++ G ++DA+NV M
Sbjct: 269 CA-------SLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVME 321
Query: 380 MK 381
K
Sbjct: 322 FK 323
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/453 (37%), Positives = 252/453 (55%), Gaps = 35/453 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WTS I+ + ++ EA M PN TF +LL S +G IH L
Sbjct: 133 WTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSG--IGEQIHAL 190
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
K ++V VG+ALLDMYA+ GRMD+A VFD + K+ +WNA+I G+ R+GD E+
Sbjct: 191 TVKYDW-HDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+ M F EMQ +G E + T SV +A A
Sbjct: 250 TLLM-------------------------------FAEMQRNGFEATHFTYSSVFSAIAG 278
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G L G W+H +++K + + V NT++D+Y++ G + AR+VF R+ K+ +V+WNS+
Sbjct: 279 IGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSM 338
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
+ FA G EA+ +F M+K G + ++F LTACSH GL+++G +YFD+MK+ Y
Sbjct: 339 LTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE-YN 397
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ P I+HY +VDL RAG L DAL + MPMKP V G+LL +CR + + +
Sbjct: 398 LEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAA 457
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
++ +LDP VLL N+YA+ G+WD A ++R+ MK G++K+P S +EI + +H F
Sbjct: 458 DHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMF 517
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+A D +H SE IY E +S ++ GYVP T
Sbjct: 518 VANDDTHPRSEEIYKKWEEISIQIRKAGYVPNT 550
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 133/247 (53%), Gaps = 4/247 (1%)
Query: 148 SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ 207
S F N++I Y + G + A R+FD MP RD SWT+L+ G+ + +EAL M
Sbjct: 98 SVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGML 157
Query: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267
+P+ T S+L A + GIG IH +K D+ D+V V + L+D+Y+RCG ++
Sbjct: 158 RGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMD 217
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
A VF ++ + VSWN++I GFA G L F MQ+ GF+ +++ +A +
Sbjct: 218 MAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIA 277
Query: 328 HAGLIEDG-LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVV 386
G +E G + ++K R+S + + I+D+Y+++G + DA V + + K + V
Sbjct: 278 GIGALEQGKWVHAHMIKSGERLSAFVGN--TILDMYAKSGSMIDARKVFDRVD-KKDVVT 334
Query: 387 LGSLLAA 393
S+L A
Sbjct: 335 WNSMLTA 341
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 14/231 (6%)
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
S++ ACA +L IH ++ F +V + N+LI LY +CG + AR+VF M R
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+ SW S+I G+A N EAL M + FKP+G +F L A + G +
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
+ K Y + ++D+Y+R GR++ A+ V + + K N V +L+A KGD
Sbjct: 189 ALTVK-YDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESK-NGVSWNALIAGFARKGD 246
Query: 400 IILAERLMKYLVDLDP-GVDSNYVLLANMYAAV--------GKWDGAGKIR 441
E + ++ G ++ + +++++A+ GKW A I+
Sbjct: 247 ---GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIK 294
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 102/244 (41%), Gaps = 35/244 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I+ R G L F M +G H T+ ++ S A + L G +H
Sbjct: 232 VSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGA--LEQGKWVH 289
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K G +R + VG +LDMYAK G M A VFD + K TWN+M+
Sbjct: 290 AHMIKSG-ERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSML--------- 339
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
F + G EA+ F EM+ GV + +T +S+L AC
Sbjct: 340 ----------------------TAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTAC 377
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ-VFQRMHKRTLVSW 284
++ G + G + + + + + T++DL R G + A +F+ K T W
Sbjct: 378 SHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 437
Query: 285 NSII 288
+++
Sbjct: 438 GALL 441
>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
Length = 1251
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/445 (37%), Positives = 247/445 (55%), Gaps = 35/445 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S G +A + M P+ TFI L + C + Q L G +IH
Sbjct: 818 VSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLSTFINLAASCQN--PQTLTQGRLIH 875
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
LG D+ D+ + N I Y + GD
Sbjct: 876 SHAIHLGTDQ-------------------DIEAI-------------NTFISMYSKSGDS 903
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
SA +FD MP R +SWT +++G+ ++G +EAL F M +GV PD VT++S+++ C
Sbjct: 904 CSARLLFDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGC 963
Query: 226 ANVGTLGIGLWIH-RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
G+L IG WI R + KDNV VCN LID+YS+CG I+ AR +F ++T+V+W
Sbjct: 964 GKFGSLEIGKWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTW 1023
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G+A+NG EA+E F+ M +KP+ ++F L AC+H+G +E G YF IMK+
Sbjct: 1024 TTMIAGYALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 1083
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y +SP ++HY C+VDL R G+L++AL ++ NM KP+ + G+LL+AC+ ++ +AE
Sbjct: 1084 VYNISPGLDHYSCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALLSACKIHRNVKIAE 1143
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ L +L+P + + YV ++N+YAA G WDG +IR MK I+K PG S I++
Sbjct: 1144 QAADSLFNLEPQMAAPYVEMSNIYAAAGMWDGFARIRSMMKLWNIKKYPGESVIQVNGKN 1203
Query: 465 HEFMAGDRSHIESEHIYSMLELLSF 489
H F G+R H+E+E IYS L LS
Sbjct: 1204 HTFTVGERGHMENEAIYSTLNGLSL 1228
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 189/453 (41%), Gaps = 90/453 (19%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V W + +S C+SG + F M L P+ +T +TL+ A F + L L
Sbjct: 711 VRDATTWNAMLSGFCQSGHTDKVFSLFREMRLDEIPPDSVTVMTLIQ-SASF-EKSLKLL 768
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
++H +LG+D V + Y K G +D A +VF+A ID
Sbjct: 769 KVMHAFGIRLGVDLQ-ATVSNTWISAYGKCGDLDSAKLVFEA------------ID---- 811
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
RGD R +SW ++ F G +A +R M +PD T I++
Sbjct: 812 RGD-------------RTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLSTFINL 858
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
+C N TL G IH + + +++ NT I +YS+ G AR +F M RT
Sbjct: 859 AASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLLFDIMPSRTC 918
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSW +I G+A G + EAL F++M K G PD V+ ++ C G +E G ++ D
Sbjct: 919 VSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIG-KWID- 976
Query: 342 MKKIYRVSPRIEHYGC----------IVDLYSRAGRLEDALNVVEN-------------- 377
R + YGC ++D+YS+ G +++A ++ +N
Sbjct: 977 --------GRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIA 1028
Query: 378 --------------------MPMKPNEVVLGSLLAACRTKGDIILAER---LMKYLVDLD 414
+ KPN + ++L AC G + +MK + ++
Sbjct: 1029 GYALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS 1088
Query: 415 PGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447
PG+D +Y + ++ GK D A ++ M +
Sbjct: 1089 PGLD-HYSCMVDLLGRKGKLDEALELIHNMSAK 1120
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 188/413 (45%), Gaps = 48/413 (11%)
Query: 40 STVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
S+VN W + E+ L F M G PN+ TF + CA + +
Sbjct: 611 SSVNA---WNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA----RLAY 663
Query: 100 LG--AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
+G M+H + K ++V VGTA +DM+ K +D A
Sbjct: 664 IGYCEMVHTHLIKSPF-WSDVFVGTATVDMFVKCDSLDYA-------------------- 702
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
++F+ MPVRDA +W A+L+GF + G+ ++ FREM++ + PD VT
Sbjct: 703 -----------AKVFERMPVRDATTWNAMLSGFCQSGHTDKVFSLFREMRLDEIPPDSVT 751
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+++++ + + +L + +H + ++ V NT I Y +CG ++ A+ VF+ +
Sbjct: 752 VMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTWISAYGKCGDLDSAKLVFEAID 811
Query: 278 K--RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+ RT+VSWNS+ FAV G +A ++ M ++ FKPD +F +C + + G
Sbjct: 812 RGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLSTFINLAASCQNPQTLTQG 871
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
R IE + +YS++G A + + MP + V +++
Sbjct: 872 -RLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLLFDIMPSRTC-VSWTVMISGYA 929
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
KGD+ A L + GV+ + V L ++ + GK+ G+ +I + + GR
Sbjct: 930 EKGDMDEALALFHAMAKT--GVNPDLVTLLSLISGCGKF-GSLEIGKWIDGRA 979
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/406 (38%), Positives = 243/406 (59%), Gaps = 5/406 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V WT+ + + R+G EA F RM + G PN +T + +S L G M
Sbjct: 209 VVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQM--GLLAFGIM 266
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H V + G+ R+ V + AL+DM+ K G + A VFD M VK ++W +M++ Y + G
Sbjct: 267 LHKYVTEGGVARS-VNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCG 325
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+ESA ++F +MP R+ +SW+ ++ + + EEA+ FREM +GV+P T++SVL+
Sbjct: 326 DLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLS 385
Query: 224 ACANVGTLGIGLWIHR-YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
ACA +G L +G WI+ Y++ V + N LID++++CG + A ++F M +R +V
Sbjct: 386 ACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVV 445
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN++I+ AV+G EA+ F ++ E PD ++F G L +CSH+GL+ +G RYF M
Sbjct: 446 SWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEM 505
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+ YR+ PR+EHY C++DL + G LE+A V MPM+ +E G+LL ACR G++ +
Sbjct: 506 EMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEI 565
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
+ LV+LDP YVL++ +YA+ KWD +R TM+ RG
Sbjct: 566 GACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRG 611
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 165/412 (40%), Gaps = 99/412 (24%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G IH K G +V+VG AL+ YA +D A VFD M + +W ++DGY
Sbjct: 161 GEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYA 220
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
R G + A R+F M V + G+ P+ VT+++
Sbjct: 221 RAGLADEAWRLFCRMVV------------------------------VGGMRPNAVTLVA 250
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR---------- 270
++A +G L G+ +H+YV + +V + N L+D++ +CGC+ +AR
Sbjct: 251 AVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKD 310
Query: 271 ---------------------QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
Q+F+ M +R +VSW+ +I ++ EA+ F M
Sbjct: 311 VYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIA 370
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
G P + L+AC+ G ++ G ++ ++ + ++D++++ G +
Sbjct: 371 AGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVG 430
Query: 370 DALNVVENMPMK----------------------------------PNEVVLGSLLAACR 395
+A + + M + P+++ LLA+C
Sbjct: 431 EASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCS 490
Query: 396 TKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
G + R M+ ++P V+ +Y + ++ VG + A ++ R M
Sbjct: 491 HSGLVSEGRRYFKEMEMFYRIEPRVE-HYACMIDLLGKVGLLEEAFEVARGM 541
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 263/461 (57%), Gaps = 35/461 (7%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLG 101
+PT +S+ R + A A + RM G+ PN T L CA P+ G
Sbjct: 137 DPTAFCYNSLIRALPAAGSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAP--GEG 194
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + GL + V T LL++YAK ++ LA VFD M
Sbjct: 195 RQLHAQALRQGLA-TSAYVQTGLLNLYAKCEQVALARTVFDGMA---------------- 237
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
GD ++ ++W+A+++G+ + G EAL FREMQ GVEPD VT++SV
Sbjct: 238 -GD-------------KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSV 283
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
++ACA G L +G W+H Y+ ++ ++++ LID+Y++CG IE AR VF M ++
Sbjct: 284 ISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDT 343
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+W+++IVGFA++G V +AL F+ M + +P+ V+F G L+AC+H+GL+EDG RY+ I
Sbjct: 344 KAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSI 403
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M+ + + P +E+YGC+VDL R+G L+DA + V MP+ PN V+ +LL AC++ I
Sbjct: 404 MQNLG-IKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRID 462
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
+AE K L++L+P NYVLL+N+YA+ +WD +RR MKG+ + G SSIEI
Sbjct: 463 IAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEIN 522
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
+HEF+ D SH E I +L ++ ++ G+ P T A
Sbjct: 523 GHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPWTAA 563
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 108/213 (50%), Gaps = 4/213 (1%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV-EPDYVTIISVLNACANVG 229
+FD++P A + +L+ G AL +R M +G P+ T+ L ACA V
Sbjct: 131 LFDQIPDPTAFCYNSLIRALPAAGS-APALAVYRRMLRAGSPRPNSFTLAFALKACAAVP 189
Query: 230 TLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSWNSII 288
G G +H L+Q + V L++LY++C + AR VF M + LV+W++++
Sbjct: 190 APGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMV 249
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
G++ G V EAL F MQ G +PD V+ ++AC+ AG ++ G ++ +
Sbjct: 250 SGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLG-KWVHAYIDRKGI 308
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ +E ++D+Y++ G +E A V + M K
Sbjct: 309 TVDLELSTALIDMYAKCGLIERARGVFDAMVEK 341
>gi|147825156|emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
Length = 532
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/447 (36%), Positives = 264/447 (59%), Gaps = 11/447 (2%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
+PT+ +SI R G+ ++ F +M G P+H+T+ + A L L
Sbjct: 67 SPTISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFVAKAVARLSE--LRLA 124
Query: 102 AMIHGLVCKLGL--DRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+H + K GL DR + +L+ MY G + A VFD M +++S +WNAM+DGY
Sbjct: 125 LAVHCRIAKEGLWFDR---FIANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAMLDGY 181
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ GD++SA ++F MP RD +SW+++++G VK G + AL F M++ G + + VT++
Sbjct: 182 AKCGDLDSAHQVFXSMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANXVTMV 241
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ--RMH 277
SVL ACA++G L G +H+Y++ + + + +L+D+Y++CG IE A VF+ M
Sbjct: 242 SVLCACAHLGALEXGRXMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMD 301
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+ ++ WN+II G A +G V E+LE F MQ G PD +++ +AC+H GL+ +
Sbjct: 302 QTDVLMWNTIIGGLATHGLVXESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWH 361
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
+F + K V P+ EHY C+VD+ SRAG+L +A + + MPM+P +LG+LL C
Sbjct: 362 FFKSLGKQGMV-PKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNH 420
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
LAER+ + L++L+P D Y+ L+N+YA V WD A +R M+ RG++K PG S
Sbjct: 421 RRFDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSF 480
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSML 484
+E+ +H F+A D++H + E IY ML
Sbjct: 481 VEVLGTLHRFIAHDKTHNDLEKIYMML 507
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 35/279 (12%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GDI+ + R+F ++P +W +++ GF K ++ F +M GV PD++T V
Sbjct: 53 GDIDHSYRIFLQIPSPTISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFVA 112
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
A A + L + L +H + K+ + + N+LI +Y CG I AR+VF M R V
Sbjct: 113 KAVARLSELRLALAVHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSV 172
Query: 283 SWNSIIVGFA--------------------------VNGFV-----GEALEYFNSMQKEG 311
SWN+++ G+A ++G V G AL F M+ G
Sbjct: 173 SWNAMLDGYAKCGDLDSAHQVFXSMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVG 232
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIM-KKIYRVSPRIEHYGCIVDLYSRAGRLED 370
K + V+ L AC+H G +E G M R + + ++D+Y++ G +E+
Sbjct: 233 PKANXVTMVSVLCACAHLGALEXGRXMHQYMVDNTMRFTLVLR--TSLMDMYAKCGAIEE 290
Query: 371 ALNVVENMPMKPNEVVL-GSLLAACRTKGDIILAERLMK 408
A+ V +PM +V++ +++ T G + + L K
Sbjct: 291 AIAVFRGVPMDQTDVLMWNTIIGGLATHGLVXESLELFK 329
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/445 (39%), Positives = 252/445 (56%), Gaps = 36/445 (8%)
Query: 58 SGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF--LGAMIHGLVCKLGLDR 115
S R+ AA F M PN TF LL CA P F +G H K G
Sbjct: 110 SARLRAAAF-FPLMLRSAVLPNKFTFPFLLKACAALPG---FPGVGLQAHAAALKFGFAT 165
Query: 116 NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM 175
+ V L+ MY+ FG L GD A +FD M
Sbjct: 166 DQ-YVSNTLIHMYSCFGGEFL--------------------------GD---ARNVFDRM 195
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
++W+A++ G+V+ G +A+ FREMQ SGV PD VT+I VL A A++G L +
Sbjct: 196 DKSSVVTWSAMIGGYVRGGLSSDAVGLFREMQASGVRPDEVTVIGVLAAAADLGALELAR 255
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
W+ R+V ++ +V +CN LID ++CG ++ A VFQ M +RT+VSW S+I A+ G
Sbjct: 256 WVGRFVEREGIGKSVTLCNALIDALAKCGDVDGAVAVFQGMEERTVVSWTSVIDALAMEG 315
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
EA+ F +M+ G +PD V F G LTACSHAG++++G YFD MK Y + P+IEHY
Sbjct: 316 RGKEAVAVFEAMKTAGVRPDDVVFIGVLTACSHAGMVDEGYGYFDSMKMEYGIDPKIEHY 375
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
GC+VD++ RAG +E A+ + MPMKPN ++ +L+AACR G + L E + + L++ P
Sbjct: 376 GCMVDMFGRAGMVERAMEFIHTMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLNEYP 435
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
++NYV+L+N+YA +W +IRR M RGI+K PG S +E+ +HEF+AGD SH
Sbjct: 436 AHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHP 495
Query: 476 ESEHIYSMLELLSFDLKLCGYVPET 500
+ + IY M+E ++ +LK G++ T
Sbjct: 496 QWKEIYMMVEEMARELKHVGHISAT 520
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 39/259 (15%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
KS+V V W++ I + R G ++A F M G P+ +T I +L+ A L
Sbjct: 197 KSSV---VTWSAMIGGYVRGGLSSDAVGLFREMQASGVRPDEVTVIGVLA--AAADLGAL 251
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
L + V + G+ ++ V + AL+D AK G +D A VF M ++ +W ++ID
Sbjct: 252 ELARWVGRFVEREGIGKS-VTLCNALIDALAKCGDVDGAVAVFQGMEERTVVSWTSVIDA 310
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
G RG +EA+ F M+ +GV PD V
Sbjct: 311 LAMEG-----------------------------RG--KEAVAVFEAMKTAGVRPDDVVF 339
Query: 219 ISVLNACANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I VL AC++ G + G + ++ ++ ++D++ R G +E A + M
Sbjct: 340 IGVLTACSHAGMVDEGYGYFDSMKMEYGIDPKIEHYGCMVDMFGRAGMVERAMEFIHTMP 399
Query: 278 -KRTLVSWNSIIVGFAVNG 295
K + W +++ +G
Sbjct: 400 MKPNPIIWRTLVAACRAHG 418
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/445 (37%), Positives = 254/445 (57%), Gaps = 10/445 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMI 104
V W IS + GR +A F RM+ + T ++ LS C+ + L +G I
Sbjct: 97 VSWNGLISSYVGHGRFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLKN--LEIGERI 154
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ V + +V G AL+DM+ K G +D A +FD+MR K+ W +M+ GY+ G
Sbjct: 155 YRYV--VTEFEMSVRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSGYVSNGR 212
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A +F+ PV+D + WTA++NG+V+ F+EALE FR MQ + + PD ++S+L
Sbjct: 213 TDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTG 272
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA G L G WIH Y+ + + V L+D+Y++CGCIE A VF M +R SW
Sbjct: 273 CAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERDTASW 332
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
S+I G A NG G AL+ + M+ G + D ++F LTACSH G + +G R F M +
Sbjct: 333 TSLIYGLATNGMSGRALDLYYEMENVGVRLDDITFVAVLTACSHGGFVAEGRRIFYSMTE 392
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV---VLGSLLAACRTKGDII 401
+++ P+ EHY C++DL RAG L++A +++ M + ++ V SLL+A R G++
Sbjct: 393 RHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDKMHGERDKTLVPVYCSLLSAARNYGNVK 452
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
+AER+ + L ++ S + LLA++YA+ +W+ +RR MK GI+K PG SSIE+
Sbjct: 453 IAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEVD 512
Query: 462 SGIHEFMAGD--RSHIESEHIYSML 484
HEF+ G+ SH + + I SML
Sbjct: 513 GVSHEFIVGNDPSSHPKMDEINSML 537
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 157/346 (45%), Gaps = 68/346 (19%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F + G P++ T +L + G +HG K GL+ ++ V +L+ M
Sbjct: 18 FGELRGQGLYPDNFTLPVVLKSIGRLRK--VIEGEKVHGYAVKTGLESDS-YVCNSLMGM 74
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YA G+M++ ++FDEMP RD +SW L+
Sbjct: 75 YAALGKMEITH-------------------------------KVFDEMPERDVVSWNGLI 103
Query: 188 NGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
+ +V G FE+A+ F+ M + S ++ D TI+S L+AC+ + L IG I+RYV+ + F
Sbjct: 104 SSYVGHGRFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTE-F 162
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA-------------- 292
+ +V+ N L+D++ +CGC++ AR +F M + + W S++ G+
Sbjct: 163 EMSVRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSGYVSNGRTDEARELFER 222
Query: 293 ------------VNGFV-----GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+NG+V EALE F MQ +PD LT C+ G +E G
Sbjct: 223 SPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQG 282
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
++ + RV+ +VD+Y++ G +E AL V M +
Sbjct: 283 -KWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKER 327
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 152/335 (45%), Gaps = 25/335 (7%)
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
+L + F + L F E++ G+ PD T+ VL + + + G +H Y +K
Sbjct: 1 MLKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTG 60
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
+ + VCN+L+ +Y+ G +E +VF M +R +VSWN +I + +G +A+ F
Sbjct: 61 LESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQ 120
Query: 306 SMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
M +E K D + L+ACS +E G R + + + +S R + +VD++ +
Sbjct: 121 RMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTEFEMSVRTGN--ALVDMFCK 178
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN-YVL 423
G L+ A + ++M K N S+++ + G A + L + P D +
Sbjct: 179 CGCLDKARAIFDSMRDK-NVKCWTSMVSGYVSNGRTDEA----RELFERSPVKDVVLWTA 233
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKK-----------PGLSSIEIGSGIHEFMAGDR 472
+ N Y ++D A ++ R M+ I+ ++E G IH ++ +R
Sbjct: 234 MMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENR 293
Query: 473 SHIESEHIYSMLELLSFDLKLCGYVPETVAGELYE 507
++ +++++ + CG + ET G YE
Sbjct: 294 VTVDKVVGTALVDMYA----KCGCI-ETALGVFYE 323
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 38/248 (15%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S V V WT+ ++ + + R EA F M P++ ++LL+GCA + L
Sbjct: 222 RSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCA--QTGAL 279
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G IHG + + + + V VGTAL+DMYAK G ++ A VF M+ + + +W
Sbjct: 280 EQGKWIHGYIRENRVTVDKV-VGTALVDMYAKCGCIETALGVFYEMKERDTASW------ 332
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
T+L+ G G AL+ + EM+ GV D +T
Sbjct: 333 -------------------------TSLIYGLATNGMSGRALDLYYEMENVGVRLDDITF 367
Query: 219 ISVLNACANVGTLGIGLWI-HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++VL AC++ G + G I + + + + + LIDL R G ++ A ++ +MH
Sbjct: 368 VAVLTACSHGGFVAEGRRIFYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDKMH 427
Query: 278 ---KRTLV 282
+TLV
Sbjct: 428 GERDKTLV 435
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/456 (35%), Positives = 261/456 (57%), Gaps = 35/456 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S +S G + F RM T G PN +T ++++S CA + L G +
Sbjct: 206 VSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGA--LDEGKSL 263
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG+V KLG+ V +L++MY K G +D
Sbjct: 264 HGVVVKLGMS-GKAKVVNSLINMYGKLGFLD----------------------------- 293
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+A ++F+EMPVR +SW +++ GY E+ ++ F M+ +G+ PD T++++L A
Sbjct: 294 --AASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRA 351
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C + G IH Y+ + F ++ + L++LY++ G + + +F+ + R ++W
Sbjct: 352 CTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAW 411
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+++ G+AV+ EA++ F+ M KEG + D V+FT L+ACSH+GL+E+G +YF+IM +
Sbjct: 412 TAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSE 471
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+YRV PR++HY C+VDL R+GRLEDA ++++MPM+P+ V G+LL ACR G++ L +
Sbjct: 472 VYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGK 531
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ + L+ LDP NY++L+N+Y+A G W A K+R MK R + + PG S IE G+ I
Sbjct: 532 EVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKI 591
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
H F+ GD+ H S+ I++ LE L + G P+T
Sbjct: 592 HRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKT 627
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 157/294 (53%), Gaps = 9/294 (3%)
Query: 140 VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
V ++ F + ++ Y + G E A R+FDEMP RD +SW +L++G RGY
Sbjct: 165 VIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGAC 224
Query: 200 LECFREMQI-SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
L F M+ SG +P+ VT++SV++ACA +G L G +H V+K KV N+LI+
Sbjct: 225 LNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLIN 284
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
+Y + G ++ A Q+F+ M R+LVSWNS++V NG+ + ++ FN M++ G PD +
Sbjct: 285 MYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQAT 344
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRV--SPRIEHYGCIVDLYSRAGRLEDALNVVE 376
L AC+ GL G + I I+R + I +++LY++ GRL + ++ E
Sbjct: 345 MVALLRACTDTGL---GRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFE 401
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
+ + + + ++LA A +L +V GV+ ++V ++ +A
Sbjct: 402 EIKDR-DTIAWTAMLAGYAVHACGREAIKLFDLMV--KEGVEVDHVTFTHLLSA 452
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD--FPSQCLF 99
V V W S + H +G + F M G NP+ T + LL C D Q
Sbjct: 304 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 363
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+ A IH C D +++ TALL++YAK GR++ + +F+ ++ + + W AM+ GY
Sbjct: 364 IHAYIHR--CGFNAD---IIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGY 418
Query: 160 MRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREM-QISGVEP 213
A+++FD M D +++T LL+ G EE + F M ++ VEP
Sbjct: 419 AVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEP 477
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 125/269 (46%), Gaps = 44/269 (16%)
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+++ +++C +V IH V+K + + + L+ +Y + G E A+++F M
Sbjct: 144 SLVFAISSCTSVSYCSA---IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 200
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE-GFKPDGVSFTGALTACSHAGLIEDG 335
R LVSWNS++ G + G++G L F M+ E G +P+ V+ ++AC+ G +++G
Sbjct: 201 PNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEG 260
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK-------------- 381
++ K+ +S + + ++++Y + G L+ A + E MP++
Sbjct: 261 KSLHGVVVKL-GMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNH 319
Query: 382 --------------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
P++ + +LL AC G AE + Y+ G +++
Sbjct: 320 NGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRC--GFNADI 377
Query: 422 VL---LANMYAAVGKWDGAGKIRRTMKGR 447
++ L N+YA +G+ + + I +K R
Sbjct: 378 IIATALLNLYAKLGRLNASEDIFEEIKDR 406
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/454 (37%), Positives = 251/454 (55%), Gaps = 35/454 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WTS I+ + ++ AEA M PN TF +LL + +G IH
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSG--IGGQIH 175
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L K +V VG+ALLDMYA+ G+MD+AT VFD + K+ +WNA+I G+ R+GD
Sbjct: 176 ALAVKCDW-HEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDG 234
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E+ AL F EMQ +G E + T S+ +
Sbjct: 235 ET-------------------------------ALMVFAEMQRNGFEATHFTYSSIFSGL 263
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A +G L G W+H +++K K V NT++D+Y++ G + AR+VF+R+ + LV+WN
Sbjct: 264 AGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWN 323
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S++ FA G EA+ +F M+K G + ++F LTACSH GL+++G YFD++K+
Sbjct: 324 SMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKE- 382
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P IEHY +VDL RAG L AL + MPM+P V G+LLAACR + + +
Sbjct: 383 YNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQF 442
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
++ LDP VLL N+YA+ G WD A ++R+ MK G++K+P S +EIG+ +H
Sbjct: 443 AADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVH 502
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
F+A D +H +E IY M + +S ++ GYVP+
Sbjct: 503 MFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPD 536
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 132/246 (53%), Gaps = 4/246 (1%)
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
+F N++I Y + G + A ++FD+M +D +SWT+L+ G+ + EA+ M
Sbjct: 86 AFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLK 145
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
+P+ T S+L A GIG IH +K D+ ++V V + L+D+Y+RCG ++
Sbjct: 146 GRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDM 205
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
A VF ++ + VSWN++I GFA G AL F MQ+ GF+ +++ + +
Sbjct: 206 ATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAG 265
Query: 329 AGLIEDG-LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
G +E G + ++K +++ + + ++D+Y+++G + DA V E + + + V
Sbjct: 266 IGALEQGKWVHAHMVKSRQKLTAFVGN--TMLDMYAKSGSMIDARKVFERV-LNKDLVTW 322
Query: 388 GSLLAA 393
S+L A
Sbjct: 323 NSMLTA 328
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 24/240 (10%)
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+ + ACA L IH ++ F+ + + N+LI LY +CG + A +VF +M K+
Sbjct: 56 AFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKK 115
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+VSW S+I G+A N EA+ M K FKP+G +F L A AG D
Sbjct: 116 DMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKA---AGAYADS---- 168
Query: 340 DIMKKIYRVSPRIEHY------GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
I +I+ ++ + + + ++D+Y+R G+++ A V + + K N V +L++
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK-NGVSWNALISG 227
Query: 394 CRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAV--------GKWDGAGKIRRTMK 445
KGD A LM + G ++ + +++++ + GKW A ++ K
Sbjct: 228 FARKGDGETA--LMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQK 285
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 258/458 (56%), Gaps = 44/458 (9%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF--LGA 102
V W + +S + ++G EA F M G P+ T++T++S C+ CL L
Sbjct: 225 VVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVR 284
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H +L N V TALLDMYAKF
Sbjct: 285 TLHQKRIQL-----NCFVRTALLDMYAKF------------------------------- 308
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISV 221
GD++SA ++F+ MP R+ ++W +++ G+ + G A+E F+EM + PD VT++SV
Sbjct: 309 GDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSV 368
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
++AC ++G L +G W+ R++ + K ++ N +I +YSRCG +E A++VFQ M R +
Sbjct: 369 ISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDV 428
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VS+N++I GFA +G EA+ ++M++ G +PD V+F G LTACSHAGL+E+G + F+
Sbjct: 429 VSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFES 488
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
+K P I+HY C+VDL R G LEDA +E MPM+P+ V GSLL A R +
Sbjct: 489 IK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVE 543
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
L E L +L+P N++LL+N+YA+ G+W +IR MK G++K G S +E G
Sbjct: 544 LGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYG 603
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+H+F+ DRSH S+ IY +L L ++ GY+ +
Sbjct: 604 GKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIAD 641
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 224/497 (45%), Gaps = 85/497 (17%)
Query: 40 STVNPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
ST+NP V +TS + + A+ L + +M G P+ + L+
Sbjct: 59 STLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTG----- 113
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD---------------- 142
G H V KLG ++ V A++DMYA+ G + A VFD
Sbjct: 114 --GIGFHAHVLKLG-HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 143 -----------------AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTA 185
M ++ TW AM+ GY + D+E+A R FD MP R +SW A
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNA 230
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
+L+G+ + G EEAL F EM +G+EPD T ++V++AC++ G + + R + ++
Sbjct: 231 MLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKR 290
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
+ N V L+D+Y++ G ++ AR++F M R +V+WNS+I G+A NG A+E F
Sbjct: 291 IQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFK 350
Query: 306 SM-QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
M + PD V+ ++AC H G +E G + + ++ I + ++ +YSR
Sbjct: 351 EMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTE-NQIKLSISGHNAMIFMYSR 409
Query: 365 AGRLEDALNVVENMP----------------------------------MKPNEVVLGSL 390
G +EDA V + M ++P+ V +
Sbjct: 410 CGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGV 469
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
L AC G +L E + DP +D +Y + ++ VG+ + A +RTM+ ++
Sbjct: 470 LTACSHAG--LLEEGRKVFESIKDPAID-HYACMVDLLGRVGELEDA---KRTMERMPME 523
Query: 451 KKPGL-SSIEIGSGIHE 466
G+ S+ S IH+
Sbjct: 524 PHAGVYGSLLNASRIHK 540
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/509 (34%), Positives = 278/509 (54%), Gaps = 47/509 (9%)
Query: 32 SIQTNNSKSTVNP---TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLS 88
SIQ+ + V P T W IS + RSG EA +M PN +++ +L+S
Sbjct: 64 SIQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMP----KPNLVSYNSLIS 119
Query: 89 G--------------------CAD----------FPSQCLFLGA-----MIHGLVCKLGL 113
G C++ C LGA +HG +GL
Sbjct: 120 GLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGL 179
Query: 114 DRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
+ +N+++G AL+D Y K G D++ +F M + +W +M+ Y + +E A +F
Sbjct: 180 N-SNIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFS 238
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI 233
+M ++ +SWTAL+ GF + G +EAL F +M+ G+ P T SVL+ACA++ +
Sbjct: 239 QMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIAR 298
Query: 234 GLWIHRYVLKQ---DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
G IH ++++ D+ N+ + N LID+Y +CG + A +F+ MH++ +VSWNS+I G
Sbjct: 299 GKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITG 358
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
FA NG E+L F M + +P+ V+F G L+AC H GL+ +GLR D M+K Y V P
Sbjct: 359 FAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCP 418
Query: 351 RIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV-VLGSLLAACRTKGDIILAERLMKY 409
R +HY ++DL R RLE+A+ +++ P + V + G+LL ACR G++ LA R +
Sbjct: 419 RSDHYAIMIDLLGRNNRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEV 478
Query: 410 LVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMA 469
L L+PG + YV++ N+YAA +WD A ++RR M RG++K+ S IE+ + H+F+A
Sbjct: 479 LFQLEPGNAARYVMVYNIYAAASRWDEARQVRRLMMERGLRKEAACSWIEVRNTRHQFVA 538
Query: 470 GDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+RSH + +Y ++ L + GY+P
Sbjct: 539 KERSHCQINEVYEVIHNLVDQMYDSGYLP 567
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 200/452 (44%), Gaps = 85/452 (18%)
Query: 72 TLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF 131
TL +P H + +L+S C ++ L LG ++H K L + L+D Y+K
Sbjct: 6 TLSSLDPAHQHYSSLISKC--ITTRHLKLGKLLHSHFIKTALIFTTFL-ANRLIDFYSKC 62
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
+ A VF + VK++ +WN +I Y R G A + D+MP + +S+ +L++G
Sbjct: 63 DSIQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLG 122
Query: 192 KRGYFEEALECFREM--QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
G+ +E+L F+ M Q S V D T++S++ +CA++G + +H + N
Sbjct: 123 HHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSN 182
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS----------------------- 286
+ + N LID Y +CG + + +F RM +R +VSW S
Sbjct: 183 IIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQE 242
Query: 287 --------IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+I GFA NG EAL F M++EG P +F L+AC+ LI G
Sbjct: 243 KNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGK-- 300
Query: 339 FDIMKKIYRVSPRIEHY------GCIVDLYSRAGRL------------------------ 368
+I I R S I+++ ++D+Y + G++
Sbjct: 301 -EIHGHIIR-STCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITG 358
Query: 369 -------EDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGV- 417
E++L V E M ++PN V LL+AC G + R++ + + D GV
Sbjct: 359 FAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSM-EKDYGVC 417
Query: 418 --DSNYVLLANMYAAVGKWDGA-GKIRRTMKG 446
+Y ++ ++ + + A G I+R KG
Sbjct: 418 PRSDHYAIMIDLLGRNNRLEEAMGLIKRAPKG 449
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/433 (37%), Positives = 254/433 (58%), Gaps = 34/433 (7%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F + G P+ TF +LL CA S+ L G +H KLGL+ +N+ + L++M
Sbjct: 118 FGELLCSGLLPDDYTFSSLLKACAS--SKALREGMGLHCFAVKLGLN-HNIYICPTLINM 174
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YA+ M+ A RG +FDEM +S+ A++
Sbjct: 175 YAECNDMNAA------------------------RG-------VFDEMEQPCIVSYNAII 203
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
G+ + EAL FRE+Q S +EP VT++SV+ +CA +G L +G WIH YV K+ F
Sbjct: 204 TGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFD 263
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
VKV LID++++CG + A +F+ M R +W+++IV FA +G +A+ F M
Sbjct: 264 KYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEM 323
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
++EG +PD ++F G L ACSHAGL+E G YF M K Y ++P I+HYGC+VDL RAG
Sbjct: 324 KREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGH 383
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
L++A N V+ + +K ++ +LL+AC T G++ +A+R+++ + +LD +YV+L+N+
Sbjct: 384 LDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNL 443
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
YA VG+W+ +R+ MK RG+ K PG SS+E+ + +HEF +GD H S + L+ L
Sbjct: 444 YARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDEL 503
Query: 488 SFDLKLCGYVPET 500
++KL GYVP+T
Sbjct: 504 MKEIKLVGYVPDT 516
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 122/235 (51%), Gaps = 2/235 (0%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ A +FD++ +D I + + G+ + A F E+ SG+ PD T S+L A
Sbjct: 80 MDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKA 139
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA+ L G+ +H + +K N+ +C TLI++Y+ C + AR VF M + +VS+
Sbjct: 140 CASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSY 199
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+II G+A + EAL F +Q +P V+ + +C+ G ++ G + +KK
Sbjct: 200 NAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKK 259
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
++ ++D++++ G L DA+++ E M ++ + +++ A T GD
Sbjct: 260 -KGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQ-AWSAMIVAFATHGD 312
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 36/254 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + I+ + RS + EA F + P +T ++++ CA + L LG IH
Sbjct: 197 VSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGA--LDLGKWIH 254
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V K G D+ V V TAL+DM+AK G + A +F+ MRV+ + W+AMI + GD
Sbjct: 255 EYVKKKGFDKY-VKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDG 313
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A+ MF+EM RE GV PD +T + +L AC
Sbjct: 314 LKAISMFEEMK---------------------------RE----GVRPDEITFLGLLYAC 342
Query: 226 ANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVS 283
++ G + G + + +K ++DL R G ++ A ++ K T +
Sbjct: 343 SHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPIL 402
Query: 284 WNSIIVGFAVNGFV 297
W +++ + +G V
Sbjct: 403 WRTLLSACSTHGNV 416
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 70/177 (39%), Gaps = 12/177 (6%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC--ADFPSQCL- 98
V T W++ I G +A F M G P+ ITF+ LL C A Q
Sbjct: 294 VRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRG 353
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS-FTWNAMID 157
+ +M G+ MV D+ + G +D A D + +K++ W ++
Sbjct: 354 YFYSMSKTYGITPGIKHYGCMV-----DLLGRAGHLDEAYNFVDKLEIKATPILWRTLLS 408
Query: 158 GYMRRGDIESAVRMFD---EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV 211
G++E A R+ + E+ + L N + + G +E+ + M+ GV
Sbjct: 409 ACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGV 465
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/478 (35%), Positives = 267/478 (55%), Gaps = 59/478 (12%)
Query: 46 VQWTSSISRHCRSGRIAEAALEF---TRMTLHG------------------TNPNHITFI 84
V WT+ IS + + G ++A F +++L G T PN TF
Sbjct: 310 VSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFA 369
Query: 85 TLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM 144
T+L+ C S LG IH L+ KL + ++V VG++LLDMYAK
Sbjct: 370 TVLTSCTS--SLGFILGRQIHSLIIKLNYE-DHVFVGSSLLDMYAK-------------- 412
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFR 204
G I A +F+ +P RD +S TA+++G+ + G EEALE FR
Sbjct: 413 -----------------DGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFR 455
Query: 205 EMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
+Q G++ +YVT VL A + + L +G +H +VL+ + V + N+LID+YS+CG
Sbjct: 456 RLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCG 515
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE-GFKPDGVSFTGAL 323
+ ++R++F M++RT++SWN+++VG++ +G E L+ F M++E KPD V+ L
Sbjct: 516 NLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVL 575
Query: 324 TACSHAGLIEDGLRYFDIMK--KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ CSH GL + GL F+ M KI V P++EHYGC+VDL R+GR+E+A ++ MP +
Sbjct: 576 SGCSHGGLEDKGLNIFNDMSSGKI-EVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFE 634
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
P + GSLL ACR ++ + E + L++++PG NYV+L+N+YA+ G+W+ +R
Sbjct: 635 PTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLR 694
Query: 442 RTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
M + + K+PG SSIE+ +H F A DRSH E I ++ LS K GYVP+
Sbjct: 695 DLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPD 752
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 135/258 (52%), Gaps = 34/258 (13%)
Query: 148 SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF---R 204
S F +I Y + + A +FDEMP R+ +SWTA+++ + +RGY +AL F
Sbjct: 277 SVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADV 336
Query: 205 EMQISGV------------------EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
++ ++GV EP+ T +VL +C + +G IH ++K ++
Sbjct: 337 KISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNY 396
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
+D+V V ++L+D+Y++ G I AR VF+ + +R +VS +II G+A G EALE F
Sbjct: 397 EDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRR 456
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE------HYGCIVD 360
+Q EG K + V++TG LTA S GL D+ K+++ R E ++D
Sbjct: 457 LQGEGMKSNYVTYTGVLTALS-------GLAALDLGKQVHNHVLRSEIPSFVVLQNSLID 509
Query: 361 LYSRAGRLEDALNVVENM 378
+YS+ G L + + + M
Sbjct: 510 MYSKCGNLTYSRRIFDTM 527
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 125/299 (41%), Gaps = 58/299 (19%)
Query: 205 EMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
+M + G + ++LN C N G +H +++K + +V + LI LY++C
Sbjct: 233 QMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 292
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF------------ 312
+ A VF M +R +VSW ++I ++ G+ +AL F + K
Sbjct: 293 SLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLS 352
Query: 313 ---------KPDGVSFTGALTACSHA-GLIEDGLRYFDIMKKIYRVSPRIEHY---GCIV 359
+P+ +F LT+C+ + G I + I+K Y +H ++
Sbjct: 353 NPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYE-----DHVFVGSSLL 407
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD-PGVD 418
D+Y++ G++ +A V E +P + +VV S A + L E ++ L G+
Sbjct: 408 DMYAKDGKIHEARTVFECLPER--DVV--SCTAIISGYAQLGLDEEALELFRRLQGEGMK 463
Query: 419 SNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIES 477
SNYV + A+ GL+++++G +H + RS I S
Sbjct: 464 SNYVTYTGVLTALS---------------------GLAALDLGKQVHNHVL--RSEIPS 499
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/453 (37%), Positives = 252/453 (55%), Gaps = 35/453 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WTS I+ + ++ EA M PN TF +LL S +G IH L
Sbjct: 133 WTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSG--IGEQIHAL 190
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
K ++V VG+ALLDMYA+ GRMD+A VFD + K+ +WNA+I G+ R+GD E+
Sbjct: 191 TVKYDW-HDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+ M F EMQ +G E + T SV +A A
Sbjct: 250 TLLM-------------------------------FAEMQRNGFEATHFTYSSVFSAIAG 278
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G L G W+H +++K + + V NT++D+Y++ G + AR+VF R+ K+ +V+WNS+
Sbjct: 279 IGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSM 338
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
+ FA G EA+ +F M+K G + ++F LTACSH GL+++G +YFD+MK+ Y
Sbjct: 339 LTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE-YN 397
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ P I+HY +VDL RAG L DAL + MPMKP V G+LL +CR + + +
Sbjct: 398 LEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAA 457
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
++ +LDP VLL N+YA+ G+WD A ++R+ MK G++K+P S +EI + +H F
Sbjct: 458 DHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMF 517
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+A D +H SE IY E +S ++ GYVP T
Sbjct: 518 VANDDTHPRSEEIYKKWEEISIQIRKAGYVPNT 550
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 133/247 (53%), Gaps = 4/247 (1%)
Query: 148 SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ 207
S F N++I Y + G + A R+FD MP RD SWT+L+ G+ + +EAL M
Sbjct: 98 SVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGML 157
Query: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267
+P+ T S+L A + GIG IH +K D+ D+V V + L+D+Y+RCG ++
Sbjct: 158 RGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMD 217
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
A VF ++ + VSWN++I GFA G L F MQ+ GF+ +++ +A +
Sbjct: 218 MAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIA 277
Query: 328 HAGLIEDG-LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVV 386
G +E G + ++K R+S + + I+D+Y+++G + DA V + + K + V
Sbjct: 278 GIGALEQGKWVHAHMIKSGERLSAFVGN--TILDMYAKSGSMIDARKVFDRVD-KKDVVT 334
Query: 387 LGSLLAA 393
S+L A
Sbjct: 335 WNSMLTA 341
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 14/231 (6%)
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
S++ ACA +L IH ++ F +V + N+LI LY +CG + AR+VF M R
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+ SW S+I G+A N EAL M + FKP+G +F L A + G +
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
+ K Y + ++D+Y+R GR++ A+ V + + K N V +L+A KGD
Sbjct: 189 ALTVK-YDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESK-NGVSWNALIAGFARKGD 246
Query: 400 IILAERLMKYLVDLDP-GVDSNYVLLANMYAAV--------GKWDGAGKIR 441
E + ++ G ++ + +++++A+ GKW A I+
Sbjct: 247 ---GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIK 294
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 102/244 (41%), Gaps = 35/244 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I+ R G L F M +G H T+ ++ S A + L G +H
Sbjct: 232 VSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGA--LEQGKWVH 289
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K G +R + VG +LDMYAK G M A VFD + K TWN+M+
Sbjct: 290 AHMIKSG-ERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSML--------- 339
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
F + G EA+ F EM+ GV + +T +S+L AC
Sbjct: 340 ----------------------TAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTAC 377
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ-VFQRMHKRTLVSW 284
++ G + G + + + + + T++DL R G + A +F+ K T W
Sbjct: 378 SHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 437
Query: 285 NSII 288
+++
Sbjct: 438 GALL 441
>gi|222623259|gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japonica Group]
Length = 748
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 164/428 (38%), Positives = 245/428 (57%), Gaps = 6/428 (1%)
Query: 68 FTRMTLHG-TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD 126
F RM G PN + +L Q L IH CK G ++ + T+LLD
Sbjct: 320 FLRMLRRGRPAPNQFVYPLVLRAACAIGVQ---LVRSIHCHACKDGFYGHD-FIRTSLLD 375
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTAL 186
Y+++G M A +FD + ++ +W A++ GY R G + A+ +F+ MP RD +W A+
Sbjct: 376 GYSRYGMMGDARKLFDGLTDRNVVSWTALVSGYARAGKVGDAIVLFERMPQRDVPAWNAI 435
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
+ G + G F EA+ FR M G P+ T+ +L+AC ++G L IG IH Y +
Sbjct: 436 IAGCTQNGLFVEAVGIFRRMVDEGFRPNGTTVSCLLSACGHLGMLKIGKVIHGYAWRSCV 495
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
V N LID+Y +CG + A+ +F R L +WNS+I A++G A+ FNS
Sbjct: 496 GFGSSVVNGLIDMYGKCGNLMEAKWIFDAFSDRGLTTWNSLINCLALHGCSESAIAVFNS 555
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M+ EG +PD V+F G L AC+H G +++GLRYF++M + + P IEHYGC+VDL RAG
Sbjct: 556 MRNEGVQPDEVTFVGLLNACTHGGFVDEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAG 615
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN 426
R +DA+N + +M ++P+EV+ GSLL ACR + LAE ++ L+DL+P + V+LAN
Sbjct: 616 RFQDAMNFINDMKVQPDEVIWGSLLNACRIHRHLELAEHAIRNLLDLNPSNANYVVMLAN 675
Query: 427 MYAAVGKWDGAGKIRRTMKGRGIQKK-PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
+Y+ G W+ K+R+ MK KK PG S IE+ F +GD H ESE IY L+
Sbjct: 676 LYSEGGFWEEVRKVRKLMKEDVTGKKLPGCSWIEVDRKTRRFYSGDDGHPESEDIYDTLD 735
Query: 486 LLSFDLKL 493
L+ +++
Sbjct: 736 KLATTMEM 743
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 86/183 (46%), Gaps = 11/183 (6%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I+ ++G EA F RM G PN T LLS C L +G +IHG
Sbjct: 432 WNAIIAGCTQNGLFVEAVGIFRRMVDEGFRPNGTTVSCLLSACGHL--GMLKIGKVIHGY 489
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ + + +V L+DMY K G + A +FDA + TWN++I+ G ES
Sbjct: 490 AWRSCVGFGSSVV-NGLIDMYGKCGNLMEAKWIFDAFSDRGLTTWNSLINCLALHGCSES 548
Query: 168 AVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREM-QISGVEPD---YVTII 219
A+ +F+ M D +++ LLN G+ +E L F M G+EP+ Y ++
Sbjct: 549 AIAVFNSMRNEGVQPDEVTFVGLLNACTHGGFVDEGLRYFELMCDEHGIEPEIEHYGCVV 608
Query: 220 SVL 222
+L
Sbjct: 609 DLL 611
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 263/461 (57%), Gaps = 35/461 (7%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLG 101
+PT +S+ R + A A + RM G+ PN T L CA P+ G
Sbjct: 88 DPTAFCYNSLIRALPAAGSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAP--GEG 145
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + GL + V T LL++YAK ++ LA VFD M
Sbjct: 146 RQLHAQALRQGLA-TSAYVQTGLLNLYAKCEQVALARTVFDGMA---------------- 188
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
GD ++ ++W+A+++G+ + G EAL FREMQ GVEPD VT++SV
Sbjct: 189 -GD-------------KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSV 234
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
++ACA G L +G W+H Y+ ++ ++++ LID+Y++CG IE AR VF M ++
Sbjct: 235 ISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDT 294
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+W+++IVGFA++G V +AL F+ M + +P+ V+F G L+AC+H+GL+EDG RY+ I
Sbjct: 295 KAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSI 354
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M+ + + P +E+YGC+VDL R+G L+DA + V MP+ PN V+ +LL AC++ I
Sbjct: 355 MQNL-GIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRID 413
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
+AE K L++L+P NYVLL+N+YA+ +WD +RR MKG+ + G SSIEI
Sbjct: 414 IAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEIN 473
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
+HEF+ D SH E I +L ++ ++ G+ P T A
Sbjct: 474 GHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPWTAA 514
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 108/213 (50%), Gaps = 4/213 (1%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV-EPDYVTIISVLNACANVG 229
+FD++P A + +L+ G AL +R M +G P+ T+ L ACA V
Sbjct: 82 LFDQIPDPTAFCYNSLIRALPAAGS-APALAVYRRMLRAGSPRPNSFTLAFALKACAAVP 140
Query: 230 TLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSWNSII 288
G G +H L+Q + V L++LY++C + AR VF M + LV+W++++
Sbjct: 141 APGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMV 200
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
G++ G V EAL F MQ G +PD V+ ++AC+ AG ++ G ++ +
Sbjct: 201 SGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLG-KWVHAYIDRKGI 259
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ +E ++D+Y++ G +E A V + M K
Sbjct: 260 TVDLELSTALIDMYAKCGLIERARGVFDAMVEK 292
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 256/423 (60%), Gaps = 13/423 (3%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + +S + + G E F M G P+ T+ T++S C+ CL +++
Sbjct: 160 VSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLS-ESIV 218
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRV---KSSFTWNAMIDGYMR 161
L K+G R N V TALLDM+AK G ++ A +F+ + V +SS WNAMI Y R
Sbjct: 219 RKLDDKVGF-RPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYAR 277
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS--GVEPDYVTII 219
GD+ SA +FD+MP RD +SW +++ G+ + G +A++ F EM S +PD VT++
Sbjct: 278 VGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMV 337
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
SV +AC ++G LG+G W + + ++ V N+LI++YSRCG ++ A +FQ M R
Sbjct: 338 SVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATR 397
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
LVS+N++I GFA +G E++E + M+++G +PD +++ LTACSHAGL+++G R F
Sbjct: 398 DLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLF 457
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
+ +K P ++HY C++D+ RAGRLE+A+ ++++MPM+P+ + GSLL A
Sbjct: 458 ESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQ 512
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E L ++P NY LL+N+YA+ G+W K+R TM+ +G++K GLS +E
Sbjct: 513 VELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLE 572
Query: 460 IGS 462
S
Sbjct: 573 HNS 575
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 168/370 (45%), Gaps = 47/370 (12%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM- 175
NV+ T ++ +AK G + A + FD M +S +WNAM+ GY + G E +R+F++M
Sbjct: 127 NVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDML 186
Query: 176 ----PVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNACANVGT 230
D +W +++ G + R++ G P+Y ++L+ A G
Sbjct: 187 SPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGN 246
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
L I + ++ +V N +I Y+R G + A+ +F +M +R VSWNS+I G
Sbjct: 247 LEAAHKIFEQLGVYKYRSSVP-WNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAG 305
Query: 291 FAVNGFVGEALEYFNSM--QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
+ NG +A++ F M ++ KPD V+ +AC H G + G I+ K+ +
Sbjct: 306 YTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSIL-KVNHI 364
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMP----------------------------- 379
I Y ++++YSR G ++DA+ + + M
Sbjct: 365 QISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSK 424
Query: 380 -----MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
++P+ + ++L AC G + +RL + + P VD +Y + +M G+
Sbjct: 425 MKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIK--FPDVD-HYACMIDMLGRAGRL 481
Query: 435 DGAGKIRRTM 444
+ A K+ ++M
Sbjct: 482 EEAMKLIQSM 491
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 125/281 (44%), Gaps = 52/281 (18%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+ + N ++ Y + G IE A ++FDEMP R W +++G+ K G EEA F M
Sbjct: 60 RDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVM 119
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
Q+ NV T+I +++ G +
Sbjct: 120 G-----------------------------------DQEISRNVITWTTMITGHAKKGNL 144
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTA 325
+ AR F +M +R++VSWN+++ G+A G E + FN M G +PD ++ +++
Sbjct: 145 KTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISS 204
Query: 326 CSHAG---LIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPM 380
CS G L E +R D +V R ++ ++D++++ G LE A + E + +
Sbjct: 205 CSSLGDPCLSESIVRKLDD-----KVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGV 259
Query: 381 KP--NEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
+ V ++++A GD+ A K+L D P D+
Sbjct: 260 YKYRSSVPWNAMISAYARVGDLPSA----KHLFDKMPQRDT 296
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 13/208 (6%)
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
+VLK + + V N ++ +Y++ G IEFAR++F M RT+ WN +I G+ G E
Sbjct: 52 HVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEE 111
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
A F+ M + + +++T +T + G ++ YFD M + VS + ++
Sbjct: 112 ASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVS-----WNAML 166
Query: 360 DLYSRAGRLEDALNVVENM----PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
Y++ G E+ + + +M ++P+E +++++C + GD L+E +++ L D
Sbjct: 167 SGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDD-KV 225
Query: 416 GVDSNYVL---LANMYAAVGKWDGAGKI 440
G NY + L +M+A G + A KI
Sbjct: 226 GFRPNYFVKTALLDMHAKCGNLEAAHKI 253
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/436 (38%), Positives = 259/436 (59%), Gaps = 7/436 (1%)
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
G PN +F+ S C + IH + K+GL+ NNV V AL+ MY K+G +
Sbjct: 110 GLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAV--KVGLE-NNVFVVNALIGMYGKWGLV 166
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
+ VF + ++WN +I Y+ G++ A +FD M RD +SW+ ++ G+V+ G
Sbjct: 167 GESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVG 226
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
F EAL+ F +M G +P+ T++S L AC+N+ L G WIH Y+ K + K N ++
Sbjct: 227 CFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLA 286
Query: 255 TLIDLYSRCGCIEFARQVF-QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
++ID+Y++CG IE A +VF + K+ + WN++I GFA++G EA+ F M+ E
Sbjct: 287 SIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKIS 346
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
P+ V+F L ACSH ++E+G YF +M Y ++P IEHYGC+VDL SR+G L++A +
Sbjct: 347 PNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAED 406
Query: 374 VVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGK 433
++ +MPM P+ + G+LL ACR D+ R+ + + +DP +VLL+N+Y+ G+
Sbjct: 407 MISSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGR 466
Query: 434 WDGAGKIRRTMK-GRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
W+ A +R + R +K PG SSIE+ H+F+ GD+SH +S IYS L+ ++ LK
Sbjct: 467 WNEARILREKNEISRDRKKIPGCSSIELKGTFHQFLVGDQSHPQSREIYSFLDEMTTKLK 526
Query: 493 LCGYVPETVAGELYEN 508
GYVPE GEL +
Sbjct: 527 SAGYVPEL--GELLHD 540
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 137/336 (40%), Gaps = 86/336 (25%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I+ + + G EA F +M G PN T ++ L+ C++ + L G I
Sbjct: 212 VVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVA--LDQGKWI 269
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS-FTWNAMIDGYMRRG 163
H + K + N ++ + ++DMYAK G ++ A+ VF +VK + WNAMI G+ G
Sbjct: 270 HAYIGKGEIKMNERLLAS-IIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHG 328
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
A+ +F++M V + P+ VT I++LN
Sbjct: 329 MPNEAINVFEQMKVEK-------------------------------ISPNKVTFIALLN 357
Query: 224 ACAN-----VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
AC++ G L L + Y + + ++ ++DL SR
Sbjct: 358 ACSHGYMVEEGKLYFRLMVSDYAITPE----IEHYGCMVDLLSR---------------- 397
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+G + EA + +SM PD + L AC +E G R
Sbjct: 398 ---------------SGLLKEAEDMISSMP---MAPDVAIWGALLNACRIYKDMERGYRI 439
Query: 339 FDIMKKIYRVSPRIEHYGCIV---DLYSRAGRLEDA 371
I+K + P H GC V ++YS +GR +A
Sbjct: 440 GRIIKGM---DP--NHIGCHVLLSNIYSTSGRWNEA 470
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 168/453 (37%), Positives = 251/453 (55%), Gaps = 35/453 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WTS I+ + ++ EA M PN TF +LL S + G IH L
Sbjct: 9 WTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGI--GEQIHAL 66
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
K ++V VG+ALLDMYA+ GRMD+A VFD + K+ +WNA+I G+ R+GD E+
Sbjct: 67 TVKYDW-HDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 125
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+ M F EMQ +G E + T SV +A A
Sbjct: 126 TLLM-------------------------------FAEMQRNGFEATHFTYSSVFSAIAG 154
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G L G W+H +++K + + V NT++D+Y++ G + AR+VF + K+ LV+WNS+
Sbjct: 155 IGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSM 214
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
+ FA G EA+ +F M+K G + ++F LTACSH GL+++G +YFD+MK+ +
Sbjct: 215 LTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE-HN 273
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ P I+HY +VDL RAG L DAL + MPMKP V G+LL +CR + + +
Sbjct: 274 LEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAA 333
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
++ +LDP VLL N+YA+ G+WD A ++R+ MK G++K+P S +EI + +H F
Sbjct: 334 DHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMF 393
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+A D +H SE IY E +S ++ GYVP T
Sbjct: 394 VANDDTHPRSEEIYKKWEEISIQIRKAGYVPNT 426
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 119/225 (52%), Gaps = 4/225 (1%)
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
M RD SWT+L+ G+ + +EAL M +P+ T S+L A + GIG
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
IH +K D+ D+V V + L+D+Y+RCG ++ A VF ++ + VSWN++I GFA
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKKIYRVSPRIE 353
G L F MQ+ GF+ +++ +A + G +E G + ++K R+S +
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
+ I+D+Y+++G + DA V +++ K + V S+L A G
Sbjct: 181 N--TILDMYAKSGSMIDARKVFDHVD-KKDLVTWNSMLTAFAQYG 222
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 102/244 (41%), Gaps = 35/244 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I+ R G L F M +G H T+ ++ S A + L G +H
Sbjct: 108 VSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGA--LEQGKWVH 165
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K G +R + VG +LDMYAK G M A VFD + K TWN+M+
Sbjct: 166 AHMIKSG-ERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSML--------- 215
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
F + G EA+ F EM+ GV + +T +S+L AC
Sbjct: 216 ----------------------TAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTAC 253
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ-VFQRMHKRTLVSW 284
++ G + G + + + + + T++DL R G + A +F+ K T W
Sbjct: 254 SHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 313
Query: 285 NSII 288
+++
Sbjct: 314 GALL 317
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 243/463 (52%), Gaps = 41/463 (8%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+H T+ L C+ S+ L LG IH V KL LDRN V V + + MY++ GR + A
Sbjct: 121 PDHYTYPLALKSCS--ASKDLLLGLQIHSAVAKLRLDRN-VYVAHSAISMYSRCGRPEDA 177
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRG---------------------------------- 163
VFD M + +WNAMI G+ R G
Sbjct: 178 YRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGN 237
Query: 164 ----DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
DI R+FD M ++ ISW A+L + + +A+E F M+ VEPD +T+
Sbjct: 238 AKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLA 297
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+VL C + +G IH + +++ N+ + N L+D+Y+ CGC++ AR++F M R
Sbjct: 298 TVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSAR 357
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
++SW SII + +G EA++ F M +G +PD ++F L ACSHAGL+ DG YF
Sbjct: 358 DVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYF 417
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
D M Y + P+ EHY C+VDL RAG + +A + + M ++PNE V G+LL ACR +
Sbjct: 418 DSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIHSN 477
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ + L L P YVLL+NMYA G+W +R M +GI+K PG S +E
Sbjct: 478 MDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVE 537
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
+G +H F GDR H +SE IY L+ L ++ GY PE A
Sbjct: 538 LGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEA 580
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 128/281 (45%), Gaps = 20/281 (7%)
Query: 181 ISWTALLNGFVKRGYFEEALECFREMQISGVE--PDYVTIISVLNACANVGTLGIGLWIH 238
+ + L+ +AL F M+ G PD+ T L +C+ L +GL IH
Sbjct: 87 VCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIH 146
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
V K NV V ++ I +YSRCG E A +VF M R +VSWN++I GFA G
Sbjct: 147 SAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFD 206
Query: 299 EALEYFNS-MQKEGFKPDGVSFTGALTACSHAGLIEDGLRY----FDIMKKIYRVSPRIE 353
A+E F + +G PD + G L A +A D +R+ FD M+ +S
Sbjct: 207 RAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAK--PDDIRFVRRVFDNMQFKELIS---- 260
Query: 354 HYGCIVDLYSRAG---RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
+ ++ +Y+ + + ++E ++P+ + L ++L C + +R+ + +
Sbjct: 261 -WNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEII 319
Query: 411 --VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
++ P + L+ +MYA+ G A +I M R +
Sbjct: 320 KRKNMCPNLLLENALM-DMYASCGCLKDAREIFDLMSARDV 359
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 164/452 (36%), Positives = 250/452 (55%), Gaps = 35/452 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTR-MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
WT+ I+ + + G E AL+ R M L PNH TF + L CA+ + L +G +
Sbjct: 343 WTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAA--LRIGEQVFT 400
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
KLG N + N++I Y R G I+
Sbjct: 401 HAVKLGFSSVNCVA--------------------------------NSLISMYARSGRID 428
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A + FD + ++ IS+ +++ + K EEALE F E++ G+ T S+L+ A
Sbjct: 429 DARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAA 488
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
++GT+G G IH V+K K N VCN LI +YSRCG IE A QVF+ M R ++SW S
Sbjct: 489 SIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTS 548
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
II GFA +GF +ALE F+ M +EG +P+ V++ L+ACSH GL+ +G ++F M +
Sbjct: 549 IITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEH 608
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
V PR+EHY CIVD+ R+G L +A+ + +MP K + +V + L ACR G++ L +
Sbjct: 609 GVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHA 668
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHE 466
K +++ +P + Y+LL+N+YA++ KWD IR+ MK + + K+ G S +E+ + +H+
Sbjct: 669 AKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHK 728
Query: 467 FMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
F GD SH ++ IY L+ LS +K GYVP
Sbjct: 729 FYVGDTSHPKAAEIYDELQNLSVKIKKLGYVP 760
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 183/380 (48%), Gaps = 40/380 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT I+R + G EA F M G P+ T ++S CA+ + L LG +H
Sbjct: 237 VTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANM--ELLLLGQQLH 294
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ GL + VG L++MYAK +DG M
Sbjct: 295 SQAIRHGLTLDRC-VGCCLINMYAK-----------------------CSVDGSMC---- 326
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRG-YFEEALECFREMQISGVEPDYVTIISVLNA 224
+A ++FD++ + SWTA++ G+V++G Y EEAL+ FR M ++ V P++ T S L A
Sbjct: 327 -AARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKA 385
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CAN+ L IG + + +K F V N+LI +Y+R G I+ AR+ F + ++ L+S+
Sbjct: 386 CANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISY 445
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I +A N EALE FN ++ +G +F L+ + G I G + I +
Sbjct: 446 NTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQ---IHAR 502
Query: 345 IYRVSPRIEHYGC--IVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+ + ++ C ++ +YSR G +E A V E+M + N + S++ G
Sbjct: 503 VIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDR-NVISWTSIITGFAKHGFATQ 561
Query: 403 AERLMKYLVDLDPGVDSNYV 422
A L + L+ GV N V
Sbjct: 562 ALELFHKM--LEEGVRPNEV 579
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 207/470 (44%), Gaps = 93/470 (19%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC--ADFPSQCLFLGAM 103
+ W++ +S + A L F M +G PN F C A+F S +G
Sbjct: 134 ISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVS----VGDS 189
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
I G V K G +++V VG L+DM+ K RG
Sbjct: 190 IFGFVIKTGYLQSDVCVGCGLIDMFVK------------------------------GRG 219
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+ SA ++F++MP R+A++WT ++ ++ GY EA++ F +M SG EPD T+ V++
Sbjct: 220 DLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVIS 279
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC---GCIEFARQVFQRMHKRT 280
ACAN+ L +G +H ++ + V LI++Y++C G + AR++F ++
Sbjct: 280 ACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHN 339
Query: 281 LVSWNSIIVGFAVN-GFVGEALEYFNSMQKEGFKPDGVSFTGALTAC------------- 326
+ SW ++I G+ G+ EAL+ F M P+ +F+ L AC
Sbjct: 340 VFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF 399
Query: 327 SHA----------------------GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
+HA G I+D + FDI+ + +S Y ++D Y++
Sbjct: 400 THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLIS-----YNTVIDAYAK 454
Query: 365 AGRLEDAL---NVVENMPMKPNEVVLGSLLAACRTKGDIILAE----RLMKYLVDLDPGV 417
E+AL N +E+ M + SLL+ + G I E R++K + L+ V
Sbjct: 455 NLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSV 514
Query: 418 DSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
+ L +MY+ G + A ++ M+ R + +SI G H F
Sbjct: 515 CN---ALISMYSRCGNIESAFQVFEDMEDRNV---ISWTSIITGFAKHGF 558
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 177/432 (40%), Gaps = 75/432 (17%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
T + + +GR+ +A M G++P+ T+ L C ++ +G ++H
Sbjct: 35 TGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKC--IRTRSFDIGTLVH--- 89
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
K + DL S T N++I Y + G E A
Sbjct: 90 --------------------EKLTQSDLQL---------DSVTLNSLISLYSKCGQWEKA 120
Query: 169 VRMFDEM-PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+F M RD ISW+A+++ F AL F +M +G P+ + AC+
Sbjct: 121 TSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACST 180
Query: 228 VGTLGIGLWIHRYVLKQDF-KDNVKVCNTLIDLYSRC-GCIEFARQVFQRMHKRTLVSWN 285
+ +G I +V+K + + +V V LID++ + G + A +VF++M +R V+W
Sbjct: 181 AEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWT 240
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIED 334
+I G+ GEA++ F M G++PD + +G ++AC+ H+ I
Sbjct: 241 LMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRH 300
Query: 335 GLRYFDIM--------------------KKIYR--VSPRIEHYGCIVDLY-SRAGRLEDA 371
GL + +KI+ + + + ++ Y + G E+A
Sbjct: 301 GLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEA 360
Query: 372 LNVVENMPMK---PNEVVLGSLLAACRTKGDIILAERLMKYLVDLD-PGVDSNYVLLANM 427
L++ M + PN S L AC + + E++ + V L V+ L +M
Sbjct: 361 LDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISM 420
Query: 428 YAAVGKWDGAGK 439
YA G+ D A K
Sbjct: 421 YARSGRIDDARK 432
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 171/458 (37%), Positives = 260/458 (56%), Gaps = 38/458 (8%)
Query: 46 VQWTSSISR-HCRSGR-IAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V W +++ R + RS AEAA RM G P+ TF++LL CA ++ G
Sbjct: 87 VVWYNTLLRGYARSSDGAAEAARVLARMLEEGVAPDTYTFVSLLKACA--AARAGEEGRQ 144
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
HG+ K G + ++ T L++MYA+ G
Sbjct: 145 AHGVAVKTGAADHEYVLPT-LINMYAECG------------------------------- 172
Query: 164 DIESAVRMFDEMPVRD-AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
D SA MF +P D +S+ A++ V+ EAL FREMQ G++P VT+ SVL
Sbjct: 173 DARSARAMFGRVPNGDCVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKPTSVTVTSVL 232
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+ACA +G L +G WIH YV K VKV LID+Y +CG +E A VFQ M R
Sbjct: 233 SACALLGALELGRWIHEYVRKAGLDSLVKVNTALIDMYGKCGSLEDAIDVFQGMESRDRQ 292
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+W+ +IV +A + + EA+ F M+K+G +PD V+F G L ACSH+G++ +GL+YFD M
Sbjct: 293 AWSVMIVAYANHSYGREAISLFEEMKKQGIRPDAVTFLGVLYACSHSGMVSEGLQYFDSM 352
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
++ Y + P I+HYGC+ DL +R+G+LE A ++ +P++P ++ +LL+AC + G + L
Sbjct: 353 RE-YGIVPGIKHYGCVTDLLARSGQLEKAYKFIDELPIQPTAILWRTLLSACGSHGAVDL 411
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
+R+ + +++LD S+YV+ +N+ A GKW+ ++R+ M +G+ K PG SSIEI +
Sbjct: 412 GKRVFERILELDDTHGSDYVIFSNLCANTGKWEEMNRVRKLMNEKGVVKVPGCSSIEIDN 471
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+HEF AGD H +S+ M++ + LKL GYVP T
Sbjct: 472 RVHEFFAGDGRHPQSQDARRMVDQVIEQLKLVGYVPNT 509
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 107/214 (50%), Gaps = 4/214 (1%)
Query: 168 AVRMFDEMPVRDAISW-TALLNGFVKRG-YFEEALECFREMQISGVEPDYVTIISVLNAC 225
A ++FD +P + W LL G+ + EA M GV PD T +S+L AC
Sbjct: 74 ARQVFDRIPTPGDVVWYNTLLRGYARSSDGAAEAARVLARMLEEGVAPDTYTFVSLLKAC 133
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVSW 284
A G H +K D+ V TLI++Y+ CG AR +F R+ + +VS+
Sbjct: 134 AAARAGEEGRQAHGVAVKTGAADHEYVLPTLINMYAECGDARSARAMFGRVPNGDCVVSY 193
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I + GEAL F MQ +G KP V+ T L+AC+ G +E G + ++K
Sbjct: 194 NAMITAAVRSSRPGEALVLFREMQAKGLKPTSVTVTSVLSACALLGALELGRWIHEYVRK 253
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+ ++ ++D+Y + G LEDA++V + M
Sbjct: 254 A-GLDSLVKVNTALIDMYGKCGSLEDAIDVFQGM 286
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 248/442 (56%), Gaps = 5/442 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V WT+ I + R G EA F RM + PN +T + S L LG
Sbjct: 197 VVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQM--GLLGLGRT 254
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H + + G R +V + AL+DM+ K G + A VFD M +K ++W +M+ Y + G
Sbjct: 255 VHQCIVESG-GRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYAKCG 313
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+E+A ++F E+P R+ +SW+ ++ + +EA+ F +M +GVEP T++SVL+
Sbjct: 314 DLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLS 373
Query: 224 ACANVGTLGIGLWIH-RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
ACA + +L +G W++ Y++ + + N ID++++CG + A ++F M + +V
Sbjct: 374 ACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNMEDKNVV 433
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN++I+ ++G EAL F + G PD ++ G L+ACSH GL+ +G +F M
Sbjct: 434 SWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRCHFKEM 493
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
K +Y + PR EHY C++DL + G L++A V +MP+ +E G+LL ACR G++ +
Sbjct: 494 KIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMHGNVEI 553
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
+ L LDP YVL++ +YA+ KW +R M+ R ++K PG SSIE+
Sbjct: 554 GKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVKKNPGCSSIEVDG 613
Query: 463 GIHEFMAGDRSHIESEHIYSML 484
HEF+ D SH+ SE IY+ L
Sbjct: 614 KCHEFLVADVSHVHSEDIYAAL 635
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 110/197 (55%), Gaps = 5/197 (2%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+S NA++ Y + A ++FDEM RD +SWT L++G+ + G +EA F M
Sbjct: 164 QSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRM 223
Query: 207 QIS-GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
++ V P+ VT+++ +A +G LG+G +H+ +++ + +V + N L+D++ +CGC
Sbjct: 224 VVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGC 283
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+ A++VF M + + SW S++ +A G + A + F + VS++ + A
Sbjct: 284 VAAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNV----VSWSCMVAA 339
Query: 326 CSHAGLIEDGLRYFDIM 342
SHA + ++ +R F+ M
Sbjct: 340 YSHANMPDEAIRIFNDM 356
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 8/226 (3%)
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
++ GF++ G AL FR + + D TI+ + A A + IH K+
Sbjct: 103 MMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIVFAVKAAATSSSPTEA--IHCVAFKRG 160
Query: 246 F-KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
F +V N L+ +Y+ + AR++F M R +VSW ++I G+A G EA F
Sbjct: 161 FIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVF 220
Query: 305 NSM-QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKKIYRVSPRIEHYGCIVDLY 362
M E P+ V+ A +A GL+ G I++ R+S +E+ +VD++
Sbjct: 221 CRMVVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLEN--ALVDMF 278
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
+ G + A V + MP+K + S+++A GD+ A +L K
Sbjct: 279 GKCGCVAAAKEVFDGMPIK-DVYSWTSMVSAYAKCGDLENAAKLFK 323
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 256/423 (60%), Gaps = 13/423 (3%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHG-TNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + +S + + G E F M G P+ T+ T++S C+ CL +++
Sbjct: 217 VSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLS-ESIV 275
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRV---KSSFTWNAMIDGYMR 161
L K+G R N V TALLDM+AK G ++ A +F+ + V +SS WNAMI Y R
Sbjct: 276 RKLDDKVGF-RPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYAR 334
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS--GVEPDYVTII 219
GD+ SA +FD+MP RD +SW +++ G+ + G +A++ F EM S +PD VT++
Sbjct: 335 VGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMV 394
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
SV +AC ++G LG+G W + + ++ V N+LI++YSRCG ++ A +FQ M R
Sbjct: 395 SVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATR 454
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
LVS+N++I GFA +G E++E + M+++G +PD +++ LTACSHAGL+++G R F
Sbjct: 455 DLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLF 514
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
+ +K P ++HY C++D+ RAGRLE+A+ ++++MPM+P+ + GSLL A
Sbjct: 515 ESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQ 569
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E L ++P NY LL+N+YA+ G+W K+R TM+ +G++K GLS +E
Sbjct: 570 VELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLE 629
Query: 460 IGS 462
S
Sbjct: 630 HNS 632
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 168/370 (45%), Gaps = 47/370 (12%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM- 175
NV+ T ++ +AK G + A + FD M +S +WNAM+ GY + G E +R+F++M
Sbjct: 184 NVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDML 243
Query: 176 ----PVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNACANVGT 230
D +W +++ G + R++ G P+Y ++L+ A G
Sbjct: 244 SPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGN 303
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
L I + ++ +V N +I Y+R G + A+ +F +M +R VSWNS+I G
Sbjct: 304 LEAAHKIFEQLGVYKYRSSVP-WNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAG 362
Query: 291 FAVNGFVGEALEYFNSM--QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
+ NG +A++ F M ++ KPD V+ +AC H G + G I+ K+ +
Sbjct: 363 YTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSIL-KVNHI 421
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMP----------------------------- 379
I Y ++++YSR G ++DA+ + + M
Sbjct: 422 QISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSK 481
Query: 380 -----MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKW 434
++P+ + ++L AC G + +RL + + P VD +Y + +M G+
Sbjct: 482 MKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIK--FPDVD-HYACMIDMLGRAGRL 538
Query: 435 DGAGKIRRTM 444
+ A K+ ++M
Sbjct: 539 EEAMKLIQSM 548
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 125/281 (44%), Gaps = 52/281 (18%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+ + N ++ Y + G IE A ++FDEMP R W +++G+ K G EEA F M
Sbjct: 117 RDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVM 176
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
Q+ NV T+I +++ G +
Sbjct: 177 G-----------------------------------DQEISRNVITWTTMITGHAKKGNL 201
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTA 325
+ AR F +M +R++VSWN+++ G+A G E + FN M G +PD ++ +++
Sbjct: 202 KTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISS 261
Query: 326 CSHAG---LIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPM 380
CS G L E +R D +V R ++ ++D++++ G LE A + E + +
Sbjct: 262 CSSLGDPCLSESIVRKLDD-----KVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGV 316
Query: 381 KP--NEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
+ V ++++A GD+ A K+L D P D+
Sbjct: 317 YKYRSSVPWNAMISAYARVGDLPSA----KHLFDKMPQRDT 353
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 13/208 (6%)
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
+VLK + + V N ++ +Y++ G IEFAR++F M RT+ WN +I G+ G E
Sbjct: 109 HVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEE 168
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
A F+ M + + +++T +T + G ++ YFD M + VS + ++
Sbjct: 169 ASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVS-----WNAML 223
Query: 360 DLYSRAGRLEDALNVVENM----PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
Y++ G E+ + + +M ++P+E +++++C + GD L+E +++ L D
Sbjct: 224 SGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDD-KV 282
Query: 416 GVDSNYVL---LANMYAAVGKWDGAGKI 440
G NY + L +M+A G + A KI
Sbjct: 283 GFRPNYFVKTALLDMHAKCGNLEAAHKI 310
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 159/433 (36%), Positives = 249/433 (57%), Gaps = 23/433 (5%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLF-LGAMIHGLVCKLGLDRNNVMVGTALLDMYA 129
+T PN TF +L C +Q F G ++H V K + V +LL+ YA
Sbjct: 241 LTNKNLQPNSFTFPSLFKACCS--NQSWFHYGPLLHTHVLKFLQPPFDNFVQASLLNFYA 298
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
K+G+M ++ +FD + TWN +++ Y R S FD+
Sbjct: 299 KYGKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFDDA-------------- 344
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
+ E+L FR+MQ+ G+ P+ VTI+++++AC+N+G + G W+H +VL+ K N
Sbjct: 345 ----DFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMN 400
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRM--HKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
V +D+YS+CGC+ A QVF +M + R + ++I GFAV+G+ +ALE + M
Sbjct: 401 RFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKM 460
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+ +G PD +F + ACSH GL+E+GL F MK+++ V P++EHYGC++DL RAGR
Sbjct: 461 KFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGR 520
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
L++A + +MPMKPN V+ SLL A R G++ + E + L++L+P NYVLL+NM
Sbjct: 521 LKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNM 580
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
YA+VG+ + ++R+ MK G+ K PG S +EI +HEF+ GDRSH S+ IY + +
Sbjct: 581 YASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYLKIAEI 640
Query: 488 SFDLKLCGYVPET 500
+ L+ G+ T
Sbjct: 641 NSRLEEYGHKART 653
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 110/244 (45%), Gaps = 46/244 (18%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRN----NV 118
E+ F M + G PN +T + L+S C++ LGA+ G + RN N
Sbjct: 349 ESLYLFRDMQVIGIRPNEVTIVALISACSN-------LGAVSQGFWVHCFVLRNKIKMNR 401
Query: 119 MVGTALLDMYAKFGRMDLATVVFDAM--RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
VGTA +DMY+K G ++LA VFD M + SF + AMI
Sbjct: 402 FVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMI-------------------- 441
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
GF GY +ALE +R+M+ G+ PD T + + AC++VG + GL
Sbjct: 442 -----------GGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLE 490
Query: 237 IHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVN 294
I + + + + ++ LIDL R G ++ A + M K V W S++ ++
Sbjct: 491 IFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIH 550
Query: 295 GFVG 298
G +G
Sbjct: 551 GNLG 554
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 250/438 (57%), Gaps = 35/438 (7%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
EAA F RM G P+ TF++LL CA ++ G HG+ K G + + T
Sbjct: 121 EAARVFVRMMEEGVAPDTYTFVSLLKACAS--ARAGEEGRQAHGVAVKAGAAEHEYVAPT 178
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
L++MYA+ G D+ +A MFD M +S
Sbjct: 179 -LINMYAECG-------------------------------DVRAARVMFDRMDGECVVS 206
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
+ A++ V+ EAL FREMQ G++P VT+ISVL+ACA +G L +G WIH Y+
Sbjct: 207 YNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIR 266
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
K VKV LID+Y++CG +E A VFQ M R +W+ ++V +A +G+ EA+
Sbjct: 267 KMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAIS 326
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M+K+G KPD V+F G L ACSH+G++ +GL+YFD M++ Y + I+HYGC+ DL
Sbjct: 327 MFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMRE-YGIVSGIKHYGCVTDLL 385
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
+R+G+LE A ++ +P+KP ++ +LL+AC GD+ + +R+ + +++LD +YV
Sbjct: 386 ARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYV 445
Query: 423 LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS 482
+ +N+ A G+W+ +R+ M +G+ K PG SSIEI + +HEF AGD SH S+
Sbjct: 446 IFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARR 505
Query: 483 MLELLSFDLKLCGYVPET 500
M++ + LKL GYVP T
Sbjct: 506 MVDEVIEQLKLVGYVPNT 523
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 116/222 (52%), Gaps = 6/222 (2%)
Query: 168 AVRMFDEMPVRDAISW-TALLNGFVKRGYF----EEALECFREMQISGVEPDYVTIISVL 222
A ++FD +P + W LL G+ + G+ EEA F M GV PD T +S+L
Sbjct: 86 ARQVFDRIPHPGDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLL 145
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
ACA+ G H +K ++ V TLI++Y+ CG + AR +F RM +V
Sbjct: 146 KACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVV 205
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
S+N++I + GEAL F MQ +G KP V+ L+AC+ G +E G D +
Sbjct: 206 SYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYI 265
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNE 384
+K+ R+ ++ ++D+Y++ G LEDA+ V ++M + +
Sbjct: 266 RKM-RLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQ 306
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 112/254 (44%), Gaps = 35/254 (13%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V + + I+ RS EA + F M G P +T I++LS CA + L LG I
Sbjct: 204 VVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGA--LELGRWI 261
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K+ LD + V V TAL+DMYAK G ++ A VF M + W+ M+ Y G
Sbjct: 262 HDYIRKMRLD-SLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHG- 319
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
Y EA+ F EM+ G++PD VT + VL A
Sbjct: 320 ------------------------------YGREAISMFEEMKKQGMKPDDVTFLGVLYA 349
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVS 283
C++ G + GL + + +K + DL +R G +E A + + K T +
Sbjct: 350 CSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAIL 409
Query: 284 WNSIIVGFAVNGFV 297
W +++ A +G V
Sbjct: 410 WRTLLSACAGHGDV 423
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 174/464 (37%), Positives = 269/464 (57%), Gaps = 36/464 (7%)
Query: 40 STVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPSQCL 98
ST V +T+ IS + +G + + ALE R L PN +TF ++L CA + +
Sbjct: 273 STKFDIVIYTAMISGYVLNG-MNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAA--I 329
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
LG +HG + K L+ VG+A+++MYAK GR+DLA ++F
Sbjct: 330 KLGRELHGYIIKNELEEK-CPVGSAIMNMYAKCGRLDLAHLIFG---------------- 372
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+ ++DAI W +++ F + G EEA+ FR+M + GV+ D VT+
Sbjct: 373 ---------------RISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTV 417
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+ L+ACAN+ L G IH +++K F+ ++ + LI++Y++CG + AR VF M +
Sbjct: 418 SAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQE 477
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ V+WNSII + +G++ ++L F++M +EG +PD ++F L++C HAG +EDG+RY
Sbjct: 478 KNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRY 537
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M + Y + ++EHY C+ DL+ RAG L++A V+ +MP P V G+LL ACR G
Sbjct: 538 FRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHG 597
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ LAE +YL+DL+P Y+LL ++ A GKW KI+ MK RG+QK PG S I
Sbjct: 598 NVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWI 657
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
E+ + F A D SH ES IYS+L+ L +L+ GYVP+ VA
Sbjct: 658 EVNNTTCVFFAADGSHPESPQIYSLLKSLLLELRKVGYVPQAVA 701
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 190/387 (49%), Gaps = 38/387 (9%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W I + ++G + +A++ F M G P+ ITF + L A+ S L IH
Sbjct: 178 VVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAE--SSSLKQIKEIH 235
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G + + G+ +LD+Y +A+ID Y + D
Sbjct: 236 GYIVRHGV----------ILDVYLN----------------------SALIDLYFKCRDA 263
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +MF+ D + +TA+++G+V G ++ALE FR + + P+ +T S+L AC
Sbjct: 264 VMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPAC 323
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A + + +G +H Y++K + ++ V + ++++Y++CG ++ A +F R+ + + WN
Sbjct: 324 AGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWN 383
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
SII F+ +G EA+ F M EG K D V+ + AL+AC++ + G M K
Sbjct: 384 SIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKG 443
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
S + ++++Y++ G+L A +V N+ + NEV S++AA G LA+
Sbjct: 444 AFESDLFD-MSALINMYAKCGKLNIA-RLVFNLMQEKNEVAWNSIIAAYGYHG--YLADS 499
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVG 432
L + L+ G+ +++ + ++ G
Sbjct: 500 LALFHNMLEEGIQPDHITFLTILSSCG 526
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 172/384 (44%), Gaps = 54/384 (14%)
Query: 89 GCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS 148
GC FP + F + C GL NNV +G + DM + G FD
Sbjct: 3 GCGVFPDKYTFPPV----IKCCTGL--NNVRLGKVIQDMILEMG--------FDL----D 44
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
F +++I Y G IE A R FD+M +D + W ++NG+V+ G + A++ F++M
Sbjct: 45 MFVASSLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMS 104
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
S +PD VT VL+ + + G +H V++ V NTL+ +YS+ +
Sbjct: 105 SEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGD 164
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS- 327
AR++F M + LV WN +I G+ NGF+ +A FN M G KPD ++FT L + +
Sbjct: 165 ARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAE 224
Query: 328 ----------HAGLIEDGL------------RYFD-----IMKKIYRVSPR--IEHYGCI 358
H ++ G+ YF + K++ +S + I Y +
Sbjct: 225 SSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAM 284
Query: 359 VDLYSRAGRLEDALNVVE---NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV--DL 413
+ Y G +DAL + M PN + S+L AC I L L Y++ +L
Sbjct: 285 ISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNEL 344
Query: 414 DPGVDSNYVLLANMYAAVGKWDGA 437
+ ++ NMYA G+ D A
Sbjct: 345 EEKCPVGSAIM-NMYAKCGRLDLA 367
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 216/504 (42%), Gaps = 86/504 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLS-GCADFPSQCLFLGAMI 104
V W I+ + + G A F M P+ +TF +LS C++ + G +
Sbjct: 77 VLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVE---YGRQL 133
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HGLV + GLD +VG L+ +Y+K ++ A +FD M WN MI GY++ G
Sbjct: 134 HGLVVRSGLDFVP-LVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGF 192
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ A +F+EM IS +G++PD +T S L +
Sbjct: 193 MDDASMLFNEM-----IS--------------------------AGIKPDSITFTSFLPS 221
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
A +L IH Y+++ +V + + LIDLY +C A ++F K +V +
Sbjct: 222 LAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIY 281
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIE 333
++I G+ +NG +ALE F + ++ P+ ++F+ L AC+ H +I+
Sbjct: 282 TAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIK 341
Query: 334 DGLR-----------------YFDIMKKIY-RVSPRIE-HYGCIVDLYSRAGRLEDALNV 374
+ L D+ I+ R+S + + I+ +S+ G+ E+A+ +
Sbjct: 342 NELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYL 401
Query: 375 VENMPM---KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD-SNYVLLANMYAA 430
M M K + V + + L+AC + + + +++ D + L NMYA
Sbjct: 402 FRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAK 461
Query: 431 VGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGD--------RSHIESEHIYS 482
GK + A + M+ + + +SI G H ++A I+ +HI +
Sbjct: 462 CGKLNIARLVFNLMQEK---NEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHI-T 517
Query: 483 MLELLSFDLKLCGYVPETVAGELY 506
L +LS CG+ + G Y
Sbjct: 518 FLTILS----SCGHAGQVEDGVRY 537
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 158/417 (37%), Positives = 249/417 (59%), Gaps = 5/417 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I + R RI EA + + M G PN + + L+SGC + + G +
Sbjct: 296 VTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGR--TMAMTEGQQLL 353
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V K+G D + + T ++ +YA GR++ A + F ++ +WNA+I GY+R I
Sbjct: 354 SAVVKMGFDCYDFIQST-IIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMI 412
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A+ +F+EMP RD SW+ +++G+ + ALE F +M SG++P+ VT++SVL+A
Sbjct: 413 DRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAI 472
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR--TLVS 283
A GTL G W H YV + + +ID+Y++CG I A +VF + ++ T+
Sbjct: 473 ATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSP 532
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN+II G AV+G +L+ F+ +++ K + ++F G LTAC H GL+E G R+F MK
Sbjct: 533 WNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHVGLVESGKRHFMSMK 592
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ + P I+HYGC+VDL RAGRLE+A ++ +MPMK + V+ G+LLAACRT G++ +
Sbjct: 593 SEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGTLLAACRTHGNVDVG 652
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
ER + L L+P ++ VLL+NMYA GKW+ A +RR M+ +Q+ PG S + +
Sbjct: 653 ERAAENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRRAMQSHRMQRLPGYSGVAL 709
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 182/376 (48%), Gaps = 37/376 (9%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V +T+ I ++ +A F +M G PN +T TL+S + F ++
Sbjct: 160 VKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGG--IWAC 217
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
M+HGLV K+ L V+V T LL MY + A +FD M K+ +WN M++GY +
Sbjct: 218 RMLHGLVIKM-LFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSK 276
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G ++SA +F+ +P +D ++W +++G+V+ EAL +R M +G EP+ V ++ +
Sbjct: 277 AGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDL 336
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG-----CIEF-------- 268
++ C + G + V+K F + +T+I LY+ CG C++F
Sbjct: 337 ISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENV 396
Query: 269 ------------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
A ++F M +R + SW+++I G+ N ALE F+ M
Sbjct: 397 ASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVAS 456
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
G KP+ V+ L+A + +G +++G + + VS + I+D+Y++ G +
Sbjct: 457 GIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLS--AAIIDMYAKCGSIN 514
Query: 370 DALNVVENMPMKPNEV 385
+AL V + K + V
Sbjct: 515 NALEVFYEIREKASTV 530
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 161/330 (48%), Gaps = 37/330 (11%)
Query: 76 TNPNHITFITLLSGCADFPSQCLFL--GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR 133
T H + +L F S LFL G IH LV K GL NN + +L++MY K G
Sbjct: 58 TGQRHFNYELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNN-FIQNSLINMYGKCGL 116
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR 193
+ A +FD ++N MI GY++ G ++ A +FDEMPV+ +S+T ++ GF +
Sbjct: 117 LVDAKSIFDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQN 176
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
+ +A+E F++M+ GV P+ VTI ++++A ++ G + +H V+K F++ V V
Sbjct: 177 ECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVS 236
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV---------------- 297
L+ +Y C + AR +F M ++ +VSWN ++ G++ GFV
Sbjct: 237 TNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLV 296
Query: 298 ---------------GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
EAL + SM G++P+ V ++ C + +G + +
Sbjct: 297 TWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAV 356
Query: 343 KKI-YRVSPRIEHYGCIVDLYSRAGRLEDA 371
K+ + I+ I+ LY+ GR+ +A
Sbjct: 357 VKMGFDCYDFIQ--STIIHLYAACGRINEA 384
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 170/511 (33%), Positives = 271/511 (53%), Gaps = 60/511 (11%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD------------ 92
V WTS + + + G I EA L F RM N +++ +L G +
Sbjct: 109 VVSWTSMVRGYVQEGLIDEAELLFWRMP----EKNVVSWTVMLGGLIEDGRVDEARRLFD 164
Query: 93 -FPSQCLFLGAMIHGLVCKLG-----------LDRNNVMVGTALLDMYAKFGRMDLATVV 140
P + + + G +C G + + NV+ T+++ YA ++D+A +
Sbjct: 165 MIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKL 224
Query: 141 FDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR---------------------- 178
F+ M K+ TW AM+ GY R G I A +F MPV+
Sbjct: 225 FEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKAR 284
Query: 179 ---------DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVG 229
D +W+AL+ + ++G+ EAL F MQ GV P++ +IIS+L+ C ++
Sbjct: 285 WVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLA 344
Query: 230 TLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIV 289
+L G +H +++ F ++ V + LI +Y +CG + ++VF R + +V WNSII
Sbjct: 345 SLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIA 404
Query: 290 GFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVS 349
G+A +GF +ALE F+ M G PD ++F G L+AC + G +++GL F+ MK Y+V
Sbjct: 405 GYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVD 464
Query: 350 PRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKY 409
+ EHY C+VDL RAG+L +A+N++ENMP++ + +V G+LL+ACRT ++ LAE K
Sbjct: 465 QKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKK 524
Query: 410 LVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFM- 468
L+ L+P Y+LL+N+YA+ +W ++R+TM+ R + K PG S IE+ + +H F
Sbjct: 525 LLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTG 584
Query: 469 AGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
G SH E E I LE L L+ GY P+
Sbjct: 585 GGSASHPEHEMIMKKLEKLGASLREAGYCPD 615
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 128/258 (49%), Gaps = 17/258 (6%)
Query: 125 LDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWT 184
+ +A+ G++D A +FD ++ K+ +WNA++ GY A ++FD+MP R+ ISW
Sbjct: 23 ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWN 82
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
L++G+VK G EA + F +M E + V+ S++ G + + +
Sbjct: 83 GLVSGYVKNGMISEARKVFDKMP----ERNVVSWTSMVRGYVQEGLIDEA----ELLFWR 134
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
+ NV ++ G ++ AR++F + + +V+ ++I G G + EA E F
Sbjct: 135 MPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIF 194
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
+ M + V++T ++ + ++ + F++M V+ + ++ Y+R
Sbjct: 195 DEMPQRNV----VAWTSMISGYAMNNKVDVARKLFEVMPDKNEVT-----WTAMLKGYTR 245
Query: 365 AGRLEDALNVVENMPMKP 382
+GR+ +A + + MP+KP
Sbjct: 246 SGRINEAAELFKAMPVKP 263
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 155/355 (43%), Gaps = 52/355 (14%)
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
L V A++ Y R A +FD M +++ +WN ++ GY++ G I A ++F
Sbjct: 42 LQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVF 101
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
D+MP R+ +SWT+++ G+V+ G +EA F M E + V+ +L G +
Sbjct: 102 DKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMP----EKNVVSWTVMLGGLIEDGRVD 157
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
R KD V N + L S G + AR++F M +R +V+W S+I G+A
Sbjct: 158 EA---RRLFDMIPVKDVVASTNMIGGLCSE-GRLSEAREIFDEMPQRNVVAWTSMISGYA 213
Query: 293 VNGFVGEALEYFNSMQKEGFKPDG--VSFTGALTACSHAGLIEDGLRYFDIM--KKIYRV 348
+N V A + F M PD V++T L + +G I + F M K +
Sbjct: 214 MNNKVDVARKLFEVM------PDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAAC 267
Query: 349 SPRIEHYG------------------------CIVDLYSRAGRLEDAL---NVVENMPMK 381
+ I +G ++ +Y R G +AL ++++ ++
Sbjct: 268 NGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVR 327
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLV----DLDPGVDSNYVLLANMYAAVG 432
PN + S+L+ C + + ++ LV DLD V S +L MY G
Sbjct: 328 PNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSS---VLITMYIKCG 379
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 10/177 (5%)
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
F + + I ++R G I+ AR +F + +T+ SWN+I+ G+ N EA + F+
Sbjct: 12 FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
M + + +S+ G ++ G+I + + FD M + VS + +V Y +
Sbjct: 72 KMPER----NTISWNGLVSGYVKNGMISEARKVFDKMPERNVVS-----WTSMVRGYVQE 122
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
G +++A + MP K N V +L G + A RL + D +N +
Sbjct: 123 GLIDEAELLFWRMPEK-NVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMI 178
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 247/456 (54%), Gaps = 34/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV WT+ I+ + +G + EA +G P+ T + +L+ CA L G +
Sbjct: 184 TVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD--LATGETV 241
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ G+ +S F A +D Y++ G+
Sbjct: 242 WRAAEQEGI--------------------------------AQSVFVATAAVDLYVKCGE 269
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A +FD+M +DA++W A++ G+ G+ EAL+ F MQ GV PD + L+A
Sbjct: 270 MAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSA 329
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C +G L +G R V +F DN + LID+Y++CG A VFQ+M K+ ++ W
Sbjct: 330 CTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVW 389
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I+G + G A M+K G K + +F G L +C+H GLI+DG RYF M K
Sbjct: 390 NAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTK 449
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y +SPRIEHYGCIVDL SRAG L++A ++++MPM N V+LG+LL C+ + LAE
Sbjct: 450 LYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAE 509
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++ L+ L+P NYV+L+N+Y+ G+W+ A K+R MK +G++K P S +E +
Sbjct: 510 HVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKV 569
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF GD+SH S+ IY L+ L ++K GY P T
Sbjct: 570 HEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTT 605
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 161/422 (38%), Positives = 255/422 (60%), Gaps = 12/422 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + +S + + G E F M G P+ T++T++S C+ CL +++
Sbjct: 232 VSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLS-ESIV 290
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRV---KSSFTWNAMIDGYMR 161
L +G R N V TALLDM+AK G ++ A +F+ + V +SS WNAMI Y R
Sbjct: 291 RKLDDTVGF-RPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYAR 349
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIIS 220
GD+ SA +FD+MP RD +SW +++ G+ + G +A++ F EM S +PD VT++S
Sbjct: 350 VGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVS 409
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
V +AC ++G LG+G W + + + ++ V N+LI +YSRCG ++ A +FQ M R
Sbjct: 410 VFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRD 469
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
LVS+N++I GFA +G E++E M+++G +PD +++ LTACSHAGL+ +G R F+
Sbjct: 470 LVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFE 529
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+K P ++HY C++D+ RAGRLE+A+ ++++MPM+P+ + GSLL A +
Sbjct: 530 SIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQV 584
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E L ++P NYVLL+N+YA+ G+W K+R TM+ +G++K GLS +E
Sbjct: 585 ELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSWLEH 644
Query: 461 GS 462
S
Sbjct: 645 NS 646
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 168/369 (45%), Gaps = 46/369 (12%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM- 175
NV+ T ++ +AK G + A + FD M +S +WNAM+ GY + G E +R+F++M
Sbjct: 199 NVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDML 258
Query: 176 ----PVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNACANVGT 230
D +W +++ G + R++ + G P+Y ++L+ A G
Sbjct: 259 SPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGN 318
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
L I + ++ +V N +I Y+R G + AR +F +M +R VSWNS+I G
Sbjct: 319 LEAAHKIFEQLGVYKYRSSVP-WNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAG 377
Query: 291 FAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVS 349
+ NG +A++ F M E KPD V+ +AC H G + G I+K+ + +
Sbjct: 378 YTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENH-IQ 436
Query: 350 PRIEHYGCIVDLYSRAGRLEDALNVVENMP------------------------------ 379
I Y ++ +YSR G ++DA+ + + M
Sbjct: 437 ISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKM 496
Query: 380 ----MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
++P+ + ++L AC G + +RL + + P VD +Y + +M G+ +
Sbjct: 497 KEDGIEPDRITYIAILTACSHAGLLGEGQRLFESIK--FPDVD-HYACMIDMLGRAGRLE 553
Query: 436 GAGKIRRTM 444
A K+ ++M
Sbjct: 554 EAMKLIQSM 562
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 44/274 (16%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+ + N ++ Y + G IE A ++FDEMP R W +++G+ K G EEA F M
Sbjct: 132 RDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVM 191
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
Q+ NV T+I +++ G +
Sbjct: 192 G-----------------------------------DQEISRNVITWTTMITGHAKKGNL 216
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTA 325
+ AR F +M +R++VSWN+++ G+A G E + FN M G +PD ++ +++
Sbjct: 217 KTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISS 276
Query: 326 CSHAG---LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP 382
CS G L E +R D P ++D++++ G LE A + E + +
Sbjct: 277 CSSLGDPCLSESIVRKLD---DTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYK 333
Query: 383 --NEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
+ V ++++A GD+ A L + D
Sbjct: 334 YRSSVPWNAMISAYARVGDLPSARHLFDKMPQRD 367
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 13/208 (6%)
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
+VLK + + V N ++ +Y++ G IEFAR++F M RT+ WN +I G+ G E
Sbjct: 124 HVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEE 183
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
A F+ M + + +++T +T + G ++ YFD M + VS + ++
Sbjct: 184 ASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVS-----WNAML 238
Query: 360 DLYSRAGRLEDALNVVENM----PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
Y++ G E+ + + +M ++P+E +++++C + GD L+E +++ L D
Sbjct: 239 SGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDD-TV 297
Query: 416 GVDSNYVL---LANMYAAVGKWDGAGKI 440
G NY + L +M+A G + A KI
Sbjct: 298 GFRPNYFVKTALLDMHAKCGNLEAAHKI 325
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 169/467 (36%), Positives = 245/467 (52%), Gaps = 41/467 (8%)
Query: 74 HGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR 133
H P+H T+ L CA + L LG IH +LGLD NV V + + MYA+ GR
Sbjct: 116 HACFPDHYTYPLALKSCA--ATDGLVLGRQIHSSTARLGLD-GNVFVAHSAISMYARCGR 172
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRG------------------------------ 163
D A +F+ M+ + +WNAMI G+ G
Sbjct: 173 PDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILP 232
Query: 164 --------DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
DI +FDEM + ISW A+L + EA+E F MQ G+EPD
Sbjct: 233 SMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDA 292
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
VT+ +VL +C V L +G IH + ++ ++ + N L+D+Y+ CGC++ AR VF
Sbjct: 293 VTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDS 352
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M R +VSW SII + +G EA++ F M +G +PD ++F L ACSHAGL++ G
Sbjct: 353 MGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMG 412
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
YF M + ++P++EHY C+VDL RAG + +A + + MP+KPNE V G+LL ACR
Sbjct: 413 KHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACR 472
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
++ + L+ L P YVLL+N+YA G+W +R M+ +GI+K PG+
Sbjct: 473 IHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGV 532
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
S+ E+G +H F GD SH +S+ IY L L ++ GY PE A
Sbjct: 533 SNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEA 579
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE--PDYVTIISVLNACANV 228
+ D P R + + LL G +AL F M+ G PD+ T L +CA
Sbjct: 76 VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
L +G IH + NV V ++ I +Y+RCG + A Q+F+ M R +VSWN++I
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195
Query: 289 VGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTACSHAGLIEDGLR--YFDIMKKI 345
GFA G G A++ F + + KPD + L + A + + L FD M+
Sbjct: 196 SGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFK 255
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIIL 402
+S + ++ +Y+ +A+ + M ++P+ V L ++L +C + L
Sbjct: 256 GLIS-----WNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSL 310
Query: 403 AERL 406
+R+
Sbjct: 311 GKRI 314
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 263/461 (57%), Gaps = 36/461 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
+ V W + IS + +G EA F M P+ T ++++S CA S + LG
Sbjct: 182 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQ--SASIELG 239
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + G N +V NA+ID Y++
Sbjct: 240 RQVHSWIDDHGFGSNLKIV--------------------------------NALIDLYIK 267
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++E+A +F+ + +D ISW L+ G+ ++EAL F+EM SG P+ VT++S+
Sbjct: 268 CGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSI 327
Query: 222 LNACANVGTLGIGLWIHRYVLK--QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACA++G + IG WIH Y+ K + + +LID+Y++CG IE A+QVF + R
Sbjct: 328 LPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNR 387
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+L SWN++I GFA++G A + F+ M+K +PD ++F G L+ACSH+G+++ G F
Sbjct: 388 SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIF 447
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
MK+ Y+++P++EHYGC++DL +G ++A ++ M M+P+ V+ SLL AC+ G+
Sbjct: 448 RSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGN 507
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E + L+ ++P +YVLL+N+YA G+W+ KIR + +G++K PG SSIE
Sbjct: 508 VELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIE 567
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I S +HEF+ GD+ H + IY MLE + L+ G+VP+T
Sbjct: 568 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 608
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 213/404 (52%), Gaps = 14/404 (3%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + H S A + M G PN TF LL CA S+ G IHG
Sbjct: 56 WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCA--KSKAFREGQQIHGH 113
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG D + + V T+L+ MY + GR++ A VFD + ++ A+I GY +G I S
Sbjct: 114 VLKLGYDLD-LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIAS 172
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +MFDE+P++D +SW A+++G+ + G +EALE F+EM + V PD T++SV++ACA
Sbjct: 173 AQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQ 232
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
++ +G +H ++ F N+K+ N LIDLY +CG +E A +F+ + + ++SWN++
Sbjct: 233 SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTL 292
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD--IMKKI 345
I G+ EAL F M + G P+ V+ L AC+H G IE G R+ I K++
Sbjct: 293 IGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG-RWIHVYINKRL 351
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSLLAACRTKGDII 401
V+ H ++D+Y++ G +E A V +++ + N ++ G + R
Sbjct: 352 KGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHG-RANAAFD 410
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+ R+ K ++ D D +V L + + G D I R+MK
Sbjct: 411 IFSRMRKNEIEPD---DITFVGLLSACSHSGMLDLGRHIFRSMK 451
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 158/391 (40%), Gaps = 50/391 (12%)
Query: 103 MIHGLVCKLGLDRNNVMVGTALLD---MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
MIH + K GL N + + L++ + F + A VF+ ++ + WN M G+
Sbjct: 5 MIHAQMIKTGLHNTNYAL-SKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63
Query: 160 MRRGDIESAVRMFDEMP----VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
D SA+ ++ M + + ++ LL K F E + + G + D
Sbjct: 64 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
S+++ G L R V Q +V LI Y+ G I A+++F
Sbjct: 124 YVHTSLISMYVQNGRLEDA----RKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDE 179
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+ + +VSWN++I G+A G EALE F M K +PD + ++AC+ + IE G
Sbjct: 180 IPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELG 239
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK-------------- 381
+ + + ++ ++DLY + G +E A + E + K
Sbjct: 240 RQVHSWIDD-HGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTH 298
Query: 382 --------------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGV---D 418
PN+V + S+L AC G I + + Y+ GV
Sbjct: 299 MNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANAS 358
Query: 419 SNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
S+ L +MYA G + A ++ ++ R +
Sbjct: 359 SHRTSLIDMYAKCGDIEAAQQVFDSILNRSL 389
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 152/384 (39%), Positives = 231/384 (60%), Gaps = 1/384 (0%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
+V++ ++ Y + G M A +F M + WN ++ GY G++E+ +F+EMP
Sbjct: 232 DVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMP 291
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNACANVGTLGIGL 235
R+ SW AL+ G+ G F E L F+ M S V P+ T+++VL+ACA +G L +G
Sbjct: 292 ERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGK 351
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
W+H Y K NV V N L+D+Y++CG IE A VF+ M + L+SWN++I G A++
Sbjct: 352 WVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHS 411
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
+AL F M+ G KPDG++F G L AC+H GL+EDG YF M Y + P+IEHY
Sbjct: 412 RGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHY 471
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
GC+VD+ +RAGRLE A+ V MP++ + V+ LL ACR ++ LAE ++ L++L+P
Sbjct: 472 GCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEP 531
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
+NYV+L+N+Y G+W+ +++ M+ G +K PG S IE+ + EF + D H
Sbjct: 532 KNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHP 591
Query: 476 ESEHIYSMLELLSFDLKLCGYVPE 499
+ E IY +L L L+ GYVP+
Sbjct: 592 QIEEIYGVLRGLVKVLRSFGYVPD 615
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 137/324 (42%), Gaps = 57/324 (17%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++FD++P + W ++ G+ + + E + F +M+ + P+ T VL +C
Sbjct: 89 ARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGK 148
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ L G +H +++K F+ N V TLID+YS G + A ++F M +R +V+W S+
Sbjct: 149 INALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSM 208
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KKI 345
I G+ ++ + A F+ + L +G IE G D++ +K+
Sbjct: 209 INGYILSADLVSARRLFDLAPERDV---------VLWNIMVSGYIEGG----DMVEARKL 255
Query: 346 YRVSPR--IEHYGCIVDLYSRAGRLEDALNVVENMPMK---------------------- 381
+ P + + ++ Y+ G +E + E MP +
Sbjct: 256 FHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVL 315
Query: 382 -------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN-YV--LLA 425
PN+ L ++L+AC G + L + + Y G+ N YV L
Sbjct: 316 GSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAE--SSGLKGNVYVGNALM 373
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGI 449
+MYA G + A + R M + +
Sbjct: 374 DMYAKCGIIENAISVFRGMDTKDL 397
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
IS+L +C + I ++ F+ N + L+ + + + +ARQ+F ++
Sbjct: 41 FISLLQSCKTSKQVH---QIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIP 97
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA-GLIEDGL 336
+ WNS+ G+A + E + F M+ +P+ +F L +C LIE
Sbjct: 98 DPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQ 157
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+ ++K +R +P + ++D+YS G + DA + M + N V S++
Sbjct: 158 VHCFLIKCGFRGNPFVGT--TLIDMYSAGGTVGDAYKIFCEM-FERNVVAWTSMINGYIL 214
Query: 397 KGDIILAERLMKYLVDLDPGVD 418
D++ A RL DL P D
Sbjct: 215 SADLVSARRLF----DLAPERD 232
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 262/461 (56%), Gaps = 36/461 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + IS + +G EA F +M P+ T +T+LS CA S + LG
Sbjct: 197 VKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQ--SGSIELG 254
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + G N +V NA+ID Y +
Sbjct: 255 RQVHSWINDHGFGXNLKIV--------------------------------NALIDLYSK 282
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++E+A +F + +D ISW L+ G+ ++EAL F++M SG +P+ VT++S+
Sbjct: 283 CGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSI 342
Query: 222 LNACANVGTLGIGLWIHRYVLK--QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L+ACA++G + IG WIH Y+ K + + + +LID+Y++CG IE A+QVF M R
Sbjct: 343 LSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNR 402
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+L SWN++I GFA++G A + F+ M+K G +PD ++F G L+ACSH+G+++ G F
Sbjct: 403 SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIF 462
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M + Y++ P++EHYGC++DL +G ++A ++ M M+P+ V+ SLL AC+ G+
Sbjct: 463 RSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGN 522
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E + L+ ++P +YVLL+N+YA +W+ K R + +G++K PG SSIE
Sbjct: 523 VELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIE 582
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I S +HEF+ GD+ H + IY MLE + L+ G+VP+T
Sbjct: 583 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 623
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 187/333 (56%), Gaps = 6/333 (1%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + H S A + M G PN TF LL CA S G +HG
Sbjct: 71 WNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCA--KSXAFKEGQQLHGQ 128
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V K G D + + + T+L+ MY + GR++ A V D + ++ A+I GY RG IES
Sbjct: 129 VLKFGFDLD-LYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIES 187
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +MFDE+PV+D +SW A ++G+ + G ++EALE F++M + V PD T+++VL+ACA
Sbjct: 188 AHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQ 247
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G++ +G +H ++ F N+K+ N LIDLYS+CG +E A +FQ + + ++SWN++
Sbjct: 248 SGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTL 307
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KKI 345
I G+ EAL F M + G KP+ V+ L+AC+H G I+ G R+ + K++
Sbjct: 308 IGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIG-RWIHVYIDKRL 366
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
V+ ++D+Y++ G +E A V ++M
Sbjct: 367 KGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM 399
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 172/415 (41%), Gaps = 56/415 (13%)
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD---MYAKFGRMD 135
NH + ++LL C S +IH + K GL N + + LL+ + F +
Sbjct: 2 NHPS-LSLLHXCKTLQSL-----RIIHAQMIKTGLHNTNYAL-SKLLEXCVLSPHFDGLP 54
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP----VRDAISWTALLNGFV 191
A VFD ++ WN M G+ D SA++++ M + ++ ++ LL
Sbjct: 55 YAISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCA 114
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
K F+E + ++ G + D S+++ G L + V + +V
Sbjct: 115 KSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDA----QKVXDKSSHRDVV 170
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
LI Y+ G IE A ++F + + +VSWN+ I G+A G EALE F M K
Sbjct: 171 SYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTN 230
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
+PD + L+AC+ +G IE G + + + ++ ++DLYS+ G LE A
Sbjct: 231 VRPDESTMVTVLSACAQSGSIELGRQVHSWIND-HGFGXNLKIVNALIDLYSKCGELETA 289
Query: 372 LNVVENMP----------------------------------MKPNEVVLGSLLAACRTK 397
+ + + KPN+V + S+L+AC
Sbjct: 290 CGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHL 349
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
G I + + Y+ GV + L L +MYA G + A ++ +M R +
Sbjct: 350 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSL 404
>gi|115447355|ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
gi|47847758|dbj|BAD21535.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|47847799|dbj|BAD21575.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536988|dbj|BAF09371.1| Os02g0620800 [Oryza sativa Japonica Group]
Length = 530
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 164/428 (38%), Positives = 245/428 (57%), Gaps = 6/428 (1%)
Query: 68 FTRMTLHG-TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD 126
F RM G PN + +L Q L IH CK G ++ + T+LLD
Sbjct: 102 FLRMLRRGRPAPNQFVYPLVLRAACAIGVQ---LVRSIHCHACKDGFYGHD-FIRTSLLD 157
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTAL 186
Y+++G M A +FD + ++ +W A++ GY R G + A+ +F+ MP RD +W A+
Sbjct: 158 GYSRYGMMGDARKLFDGLTDRNVVSWTALVSGYARAGKVGDAIVLFERMPQRDVPAWNAI 217
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
+ G + G F EA+ FR M G P+ T+ +L+AC ++G L IG IH Y +
Sbjct: 218 IAGCTQNGLFVEAVGIFRRMVDEGFRPNGTTVSCLLSACGHLGMLKIGKVIHGYAWRSCV 277
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
V N LID+Y +CG + A+ +F R L +WNS+I A++G A+ FNS
Sbjct: 278 GFGSSVVNGLIDMYGKCGNLMEAKWIFDAFSDRGLTTWNSLINCLALHGCSESAIAVFNS 337
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M+ EG +PD V+F G L AC+H G +++GLRYF++M + + P IEHYGC+VDL RAG
Sbjct: 338 MRNEGVQPDEVTFVGLLNACTHGGFVDEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAG 397
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN 426
R +DA+N + +M ++P+EV+ GSLL ACR + LAE ++ L+DL+P + V+LAN
Sbjct: 398 RFQDAMNFINDMKVQPDEVIWGSLLNACRIHRHLELAEHAIRNLLDLNPSNANYVVMLAN 457
Query: 427 MYAAVGKWDGAGKIRRTMKGRGIQKK-PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
+Y+ G W+ K+R+ MK KK PG S IE+ F +GD H ESE IY L+
Sbjct: 458 LYSEGGFWEEVRKVRKLMKEDVTGKKLPGCSWIEVDRKTRRFYSGDDGHPESEDIYDTLD 517
Query: 486 LLSFDLKL 493
L+ +++
Sbjct: 518 KLATTMEM 525
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 86/183 (46%), Gaps = 11/183 (6%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I+ ++G EA F RM G PN T LLS C L +G +IHG
Sbjct: 214 WNAIIAGCTQNGLFVEAVGIFRRMVDEGFRPNGTTVSCLLSACGHL--GMLKIGKVIHGY 271
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ + + +V L+DMY K G + A +FDA + TWN++I+ G ES
Sbjct: 272 AWRSCVGFGSSVV-NGLIDMYGKCGNLMEAKWIFDAFSDRGLTTWNSLINCLALHGCSES 330
Query: 168 AVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREM-QISGVEPD---YVTII 219
A+ +F+ M D +++ LLN G+ +E L F M G+EP+ Y ++
Sbjct: 331 AIAVFNSMRNEGVQPDEVTFVGLLNACTHGGFVDEGLRYFELMCDEHGIEPEIEHYGCVV 390
Query: 220 SVL 222
+L
Sbjct: 391 DLL 393
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 255/447 (57%), Gaps = 35/447 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC-LFLGAM 103
T W + I +S A +++M P+ TF +L C C + +G
Sbjct: 78 TFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRL---CWVKMGFG 134
Query: 104 IHGLVCKLGLDRN------------------------------NVMVGTALLDMYAKFGR 133
+HG V +LG + N +V+ +AL YA+ G
Sbjct: 135 VHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGE 194
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR 193
+ +A +FD M VK +WN MI GY +RG++ESA ++FDE+P RD ++W A++ G+V
Sbjct: 195 LGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLC 254
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD-NVKV 252
G ++ALE F EM+ G PD VT++S+L+AC ++G L G IH + + F+D +V +
Sbjct: 255 GSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLL 314
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
N LID+Y++CG I A +VFQ M ++ + +WNS++ G A +G +++ F M+K
Sbjct: 315 GNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKI 374
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
+PD ++F G L ACSHAG +E+G +YFD+M+ Y + P I HYGC+VDL RAG L +A
Sbjct: 375 RPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAF 434
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
+ ++ M ++PN +V +LL ACR G++ L R L+ + +YVLL+N+YA+ G
Sbjct: 435 DFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRG 494
Query: 433 KWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+WDG K+R+ M G++K+ G S IE
Sbjct: 495 EWDGVEKVRKLMDDSGVRKEAGCSLIE 521
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 18/294 (6%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G + A ++F + D W ++ G + A+ + +M+ V PD T VL
Sbjct: 61 GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVL 120
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC + + +G +H V + F+ N V NTLI ++ CG + AR +F KR +V
Sbjct: 121 KACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVV 180
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+W+++ G+A G +G A + F+ M + D VS+ +T + G +E + FD +
Sbjct: 181 AWSALTAGYARRGELGVARQLFDEMPVK----DLVSWNVMITGYAKRGEMESARKLFDEV 236
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK---PNEVVLGSLLAACRTKGD 399
K V+ + ++ Y G + AL + E M P+EV + SLL+AC GD
Sbjct: 237 PKRDVVT-----WNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGD 291
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLAN----MYAAVGKWDGAGKIRRTMKGRGI 449
+ +R+ + ++ G VLL N MYA G A ++ + M+ + +
Sbjct: 292 LDAGQRIHCCISEM--GFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDV 343
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 248/441 (56%), Gaps = 5/441 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ I + R G EA F RM + PN +T + S L LG +
Sbjct: 198 VSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQM--GLLGLGRTV 255
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + + G R +V + AL+DM+ K G + A VFD M +K ++W +M+ Y + GD
Sbjct: 256 HQCIVESG-GRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYAKCGD 314
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E+A ++F E+P R+ +SW+ ++ + +EA+ F +M +GVEP T++SVL+A
Sbjct: 315 LENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLSA 374
Query: 225 CANVGTLGIGLWIH-RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
CA + +L +G W++ Y++ + + N ID++++CG + A ++F M + +VS
Sbjct: 375 CAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNMEDKNVVS 434
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN++I+ ++G EAL F + G PD ++ G L+ACSH GL+ +G +F MK
Sbjct: 435 WNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRCHFKEMK 494
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+Y + PR EHY C++DL + G L++A V +MP+ +E G+LL ACR G++ +
Sbjct: 495 IVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMHGNVEIG 554
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
+ L LDP YVL++ +YA+ KW +R M+ R ++K PG SSIE+
Sbjct: 555 KCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVKKNPGCSSIEVDGK 614
Query: 464 IHEFMAGDRSHIESEHIYSML 484
HEF+ D SH+ SE IY+ L
Sbjct: 615 CHEFLVADVSHVHSEDIYAAL 635
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 110/197 (55%), Gaps = 5/197 (2%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+S NA++ Y + A ++FDEM RD +SWT L++G+ + G +EA F M
Sbjct: 164 QSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRM 223
Query: 207 QIS-GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
++ V P+ VT+++ +A +G LG+G +H+ +++ + +V + N L+D++ +CGC
Sbjct: 224 VVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGC 283
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+ A++VF M + + SW S++ +A G + A + F + VS++ + A
Sbjct: 284 VAAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNV----VSWSCMVAA 339
Query: 326 CSHAGLIEDGLRYFDIM 342
SHA + ++ +R F+ M
Sbjct: 340 YSHANMPDEAIRIFNDM 356
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 8/226 (3%)
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
++ GF++ G AL FR + + D TI+ + A A + IH K+
Sbjct: 103 MMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIVFAVKAAATSSSPTEA--IHCVAFKRG 160
Query: 246 F-KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
F +V N L+ +Y+ + AR++F M R +VSW ++I G+A G EA F
Sbjct: 161 FIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVF 220
Query: 305 NSM-QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKKIYRVSPRIEHYGCIVDLY 362
M E P+ V+ A +A GL+ G I++ R+S +E+ +VD++
Sbjct: 221 CRMVVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLEN--ALVDMF 278
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
+ G + A V + MP+K + S+++A GD+ A +L K
Sbjct: 279 GKCGCVAAAKEVFDGMPIK-DVYSWTSMVSAYAKCGDLENAAKLFK 323
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 158/453 (34%), Positives = 266/453 (58%), Gaps = 7/453 (1%)
Query: 43 NPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NPT W + I + + F +M +G +P+++T+ L+ + +Q LG
Sbjct: 75 NPTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKATSKLLNQ--ELG 132
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + K G + + + +L+ MYA + A VFD M K+ TWNAM+DGY +
Sbjct: 133 MAVHVHIVKSGHEIDK-FIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWNAMLDGYAK 191
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
GD+ A +F+ MP +D +SW++L++G+VK + EA+ F M G + VT++S
Sbjct: 192 CGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMANEVTLVSA 251
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ--RMHKR 279
L ACA++G L G +HRY+++ + + + +L+D+Y++CG I A VF+ + +
Sbjct: 252 LCACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTVFRACSLQEA 311
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
++ WN+II G A +G + EA+ F M+ G PD +++ L+ C+H GL+E+ +F
Sbjct: 312 DVLIWNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGGLVEEAWYFF 371
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
D ++K + + P++EHY C+VD SRAG++ +A + MP++P +LG+LL+ C G
Sbjct: 372 DCLRK-HGMIPKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGALLSGCMKHGK 430
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ +A+ + + LV+LDP D YV L+N+YAA +WD A IR M+ +G++K PG S IE
Sbjct: 431 LDIAKVVGRRLVELDPNHDGRYVGLSNIYAADKRWDDAKNIREAMERKGVKKSPGFSFIE 490
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+ +H FMA D++H + E I+ ML L+ +K
Sbjct: 491 VYGVLHRFMAHDKTHGDCEQIFMMLNLIVDQMK 523
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 150/338 (44%), Gaps = 69/338 (20%)
Query: 82 TFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVF 141
T I+LL GC + +F IH L+ LG+ ++ + LL F
Sbjct: 15 TLISLLDGC-----KSMFELKRIHALLFTLGISQDETIKSKLLL---------------F 54
Query: 142 DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALE 201
A+ D++ + ++ +P +W L+ F ++
Sbjct: 55 SALSPAR---------------DLDYSYKLILNVPNPTTFNWNTLIRAFSNTKNPNPSIT 99
Query: 202 CFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
F +M +GV PDY+T ++ A + + +G+ +H +++K + + + N+LI +Y+
Sbjct: 100 VFIKMLQNGVSPDYLTYPFLVKATSKLLNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYA 159
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFA--------------------------VNG 295
C I AR+VF M ++ LV+WN+++ G+A ++G
Sbjct: 160 SCRDIASARKVFDEMPRKNLVTWNAMLDGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDG 219
Query: 296 FV-----GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKKIYRVS 349
+V GEA+ F M +G + V+ AL AC+H G +E G + + I++ ++
Sbjct: 220 YVKGRVYGEAMALFERMSFDGPMANEVTLVSALCACAHLGALEHGRMMHRYIVENELPLT 279
Query: 350 PRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
++ +VD+Y++ G + +AL V ++ +V++
Sbjct: 280 IVLQ--TSLVDMYAKCGAIHEALTVFRACSLQEADVLI 315
>gi|357498595|ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
gi|355494601|gb|AES75804.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
Length = 528
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 162/433 (37%), Positives = 254/433 (58%), Gaps = 19/433 (4%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F M PN+ + +L + FL ++H + K G N +V T+L+D
Sbjct: 91 FKTMLNSNIRPNNFIYPHVLKSVKE-----RFLVDLVHAQIVKCGF-LNYPVVETSLVDS 144
Query: 128 YAK-FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTAL 186
Y+K G + A VFD M ++ + ++ GY+R GD+E + +FDEM RD +W A+
Sbjct: 145 YSKVLGGLRDAHKVFDEMSERNIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAV 204
Query: 187 LNGFVKRGYFEEALECFREMQIS----------GVEPDYVTIISVLNACANVGTLGIGLW 236
++G + G+F E + FREM + G +P+ VT++ VL+AC + G L +G W
Sbjct: 205 ISGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKW 264
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
IH YV + F + V N L+D+Y +CG +E AR+VF+ ++ L SWNS+I +A++G
Sbjct: 265 IHGYVYRHGFVVDSFVSNALVDMYGKCGSLELARKVFEMDQRKGLTSWNSMINCYALHGK 324
Query: 297 VGEALEYFNSMQK--EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
+A+ +F M + G +PD V+F G L AC+H GL+E G YF++M K Y + P+I H
Sbjct: 325 CEDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAH 384
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
YGC++DL RAG+ ++A++VV+ M M+P+EVV GSLL C+ G LAE K LV++D
Sbjct: 385 YGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLVEID 444
Query: 415 PGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSH 474
P +LAN+Y +GKWD + +K + K PG S IE+ +H+F + D+S+
Sbjct: 445 PHNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKIPGCSWIEVDDKVHQFFSLDQSN 504
Query: 475 IESEHIYSMLELL 487
++E +Y++LE L
Sbjct: 505 PKTEELYNILESL 517
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 160/397 (40%), Positives = 249/397 (62%), Gaps = 6/397 (1%)
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
LG IH + GLD+N V V ++L+ MY+ + A +FD + NAMI Y
Sbjct: 130 LGKQIHCVGVVTGLDKN-VSVCSSLIQMYSCYDVCS-ARKLFDEFG-GNGCVLNAMIVAY 186
Query: 160 MRRGDIESAVRMFDEMPVRD--AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
++ GD+ +A ++FD M RD SWTA+++G+ + EA++ FR MQ+ V+PD +
Sbjct: 187 VKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIA 246
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I++VL+ACA++G L +G WIH Y+ K V + N+LID+Y++ G I A ++F+ M
Sbjct: 247 ILAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMK 306
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGL 336
+T+++W ++I G A++G EAL F+ M+KE KP+ V+F L+ACSH GL+E G
Sbjct: 307 HKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGR 366
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
YF M+ Y + P+IEHYGC++DL RAG L++A +V MP + N + GSLLAA
Sbjct: 367 DYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTR 426
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
GD LAE +++L L+PG NY LL+N YA++G+W+ + +R+ M+ G++K PG+S
Sbjct: 427 CGDAELAEEALRHLTVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVS 486
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493
IE+ + ++EF+AGD+ I IY +L L +K+
Sbjct: 487 FIEVNNIVYEFIAGDKLSIYFVDIYDVLHSLDGQIKI 523
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 32/214 (14%)
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
A+ FR ++ G+ D ++ VL + + G+G IH + NV VC++LI
Sbjct: 96 AVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCVGVVTGLDKNVSVCSSLIQ 155
Query: 259 LYS-----------------------------RCGCIEFARQVFQRMHKR--TLVSWNSI 287
+YS + G + AR++F M +R + SW ++
Sbjct: 156 MYSCYDVCSARKLFDEFGGNGCVLNAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAM 215
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+ EA++ F MQ E KPD ++ L+AC+ G + G + ++K ++
Sbjct: 216 ISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEK-HK 274
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+S + Y ++D+Y+++G + AL + ENM K
Sbjct: 275 LSKIVPLYNSLIDMYAKSGNIRKALELFENMKHK 308
>gi|356541109|ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Glycine max]
Length = 681
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 165/469 (35%), Positives = 269/469 (57%), Gaps = 11/469 (2%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
+ TV W + I+ + ++G + ++ F M +G + N T ++L+ C+ +C LG
Sbjct: 214 LKDTVSWNTLIAGYSQNGYMEKSLTFFVEMIENGIDFNEHTLASVLNACSAL--KCSKLG 271
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H V K G N + + ++D Y+K G + A +V+ + +KS F ++I Y
Sbjct: 272 KSVHAWVLKKGYSSNQ-FISSGVVDFYSKCGNIRYAELVYAKIGIKSPFAVASLIAAYSS 330
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIIS 220
+G++ A R+FD + R+++ WTAL +G+VK E + FRE + + PD + I+S
Sbjct: 331 QGNMTEAQRLFDSLLERNSVVWTALCSGYVKSQQCEAVFKLFREFRTKEALVPDAMIIVS 390
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM--HK 278
+L ACA L +G IH Y+L+ FK + K+ ++L+D+YS+CG + +A ++F+ +
Sbjct: 391 ILGACAIQADLSLGKQIHAYILRMRFKVDKKLLSSLVDMYSKCGNVAYAEKLFRLVTDSD 450
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R + +N II G+A +GF +A+E F M + KPD V+F L+AC H GL+E G ++
Sbjct: 451 RDAILYNVIIAGYAHHGFENKAIELFQEMLNKSVKPDAVTFVALLSACRHRGLVELGEQF 510
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M+ Y V P I HY C+VD+Y RA +LE A+ + +P+K + + G+ L AC+
Sbjct: 511 FMSMEH-YNVLPEIYHYACMVDMYGRANQLEKAVEFMRKIPIKIDATIWGAFLNACQMSS 569
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
D L ++ + L+ ++ S YV LAN YAA GKWD G+IR+ M+G +K G S I
Sbjct: 570 DAALVKQAEEELLKVEADNGSRYVQLANAYAAKGKWDEMGRIRKKMRGHEAKKLAGCSWI 629
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYE 507
+ +GIH F +GDRSH ++E +YS L L+ L Y+ +LYE
Sbjct: 630 YVENGIHVFTSGDRSHSKAEAVYSTLTCLNGKL----YLSFKEQKQLYE 674
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 195/422 (46%), Gaps = 55/422 (13%)
Query: 116 NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM 175
+++ L+ +Y+ G + A +FD M + F+WNA+I Y++ ++ A +FD
Sbjct: 16 SSIFTCNQLIHLYSNHGLLQEAHKLFDEMPHPNVFSWNAIIMAYIKAHNLTQARALFDSA 75
Query: 176 PVRDAISWTALLNGFV-KRGYFEEALECFREMQIS--GVEPDYVTIISVLNACANVGTLG 232
RD +S+ +LL+ +V GY EAL+ F MQ + + D +T+ ++LN A + L
Sbjct: 76 SHRDLVSYNSLLSAYVGSDGYETEALDLFTRMQSARDTIGIDEITLTNMLNLAAKLRVLC 135
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF------------------- 273
G +H Y++K + ++LID+YS+CGC + A +F
Sbjct: 136 YGKQMHSYMVKTANDLSKFALSSLIDMYSKCGCFQEACNLFGSCDEMVDLVSKNAMVAAC 195
Query: 274 --------------QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
+ + VSWN++I G++ NG++ ++L +F M + G + +
Sbjct: 196 CREGKMDMALNVFWKNPELKDTVSWNTLIAGYSQNGYMEKSLTFFVEMIENGIDFNEHTL 255
Query: 320 TGALTACSHAGLIEDGLRYFD-IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
L ACS + G ++KK Y + I +VD YS+ G + A V +
Sbjct: 256 ASVLNACSALKCSKLGKSVHAWVLKKGYSSNQFIS--SGVVDFYSKCGNIRYAELVYAKI 313
Query: 379 PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAG 438
+K + + SL+AA ++G++ A+RL L++ + V + L + Y + +
Sbjct: 314 GIK-SPFAVASLIAAYSSQGNMTEAQRLFDSLLERNSVV---WTALCSGYVKSQQCEAVF 369
Query: 439 KIRRTMKGRG--------IQKKPGLSSIE----IGSGIHEFMAGDRSHIESEHIYSMLEL 486
K+ R + + I G +I+ +G IH ++ R ++ + + S++++
Sbjct: 370 KLFREFRTKEALVPDAMIIVSILGACAIQADLSLGKQIHAYILRMRFKVDKKLLSSLVDM 429
Query: 487 LS 488
S
Sbjct: 430 YS 431
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 211/475 (44%), Gaps = 82/475 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALE-FTRM--TLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
V + S +S + S AL+ FTRM + IT +L+ A C G
Sbjct: 81 VSYNSLLSAYVGSDGYETEALDLFTRMQSARDTIGIDEITLTNMLNLAAKLRVLCY--GK 138
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM-RVKSSFTWNAMIDGYMR 161
+H + K D + + ++L+DMY+K G A +F + + + NAM+ R
Sbjct: 139 QMHSYMVKTANDLSKFAL-SSLIDMYSKCGCFQEACNLFGSCDEMVDLVSKNAMVAACCR 197
Query: 162 RGDIESAVRMFDEMP-VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G ++ A+ +F + P ++D +SW L+ G+ + GY E++L F EM +G++ + T+ S
Sbjct: 198 EGKMDMALNVFWKNPELKDTVSWNTLIAGYSQNGYMEKSLTFFVEMIENGIDFNEHTLAS 257
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VLNAC+ + +G +H +VLK+ + N + + ++D YS+CG I +A V+ ++ ++
Sbjct: 258 VLNACSALKCSKLGKSVHAWVLKKGYSSNQFISSGVVDFYSKCGNIRYAELVYAKIGIKS 317
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSM--------------------------------Q 308
+ S+I ++ G + EA F+S+
Sbjct: 318 PFAVASLIAAYSSQGNMTEAQRLFDSLLERNSVVWTALCSGYVKSQQCEAVFKLFREFRT 377
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
KE PD + L AC+ + G + + I++ ++V ++ +VD+YS+ G
Sbjct: 378 KEALVPDAMIIVSILGACAIQADLSLGKQIHAYILRMRFKVDKKL--LSSLVDMYSKCGN 435
Query: 368 L--------------EDAL--NVV--------------------ENMPMKPNEVVLGSLL 391
+ DA+ NV+ N +KP+ V +LL
Sbjct: 436 VAYAEKLFRLVTDSDRDAILYNVIIAGYAHHGFENKAIELFQEMLNKSVKPDAVTFVALL 495
Query: 392 AACRTKGDIILAERLMKYL--VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
+ACR +G + L E+ + ++ P + +Y + +MY + + A + R +
Sbjct: 496 SACRHRGLVELGEQFFMSMEHYNVLPEI-YHYACMVDMYGRANQLEKAVEFMRKI 549
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 81/200 (40%), Gaps = 35/200 (17%)
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF------ 291
H +K ++ CN LI LYS G ++ A ++F M + SWN+II+ +
Sbjct: 6 HVQAIKSGLVSSIFTCNQLIHLYSNHGLLQEAHKLFDEMPHPNVFSWNAIIMAYIKAHNL 65
Query: 292 --------------------------AVNGFVGEALEYFNSMQ--KEGFKPDGVSFTGAL 323
+G+ EAL+ F MQ ++ D ++ T L
Sbjct: 66 TQARALFDSASHRDLVSYNSLLSAYVGSDGYETEALDLFTRMQSARDTIGIDEITLTNML 125
Query: 324 TACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPN 383
+ ++ G + M K + ++D+YS+ G ++A N+ + +
Sbjct: 126 NLAAKLRVLCYGKQMHSYMVKTANDLSKFA-LSSLIDMYSKCGCFQEACNLFGSCDEMVD 184
Query: 384 EVVLGSLLAACRTKGDIILA 403
V +++AAC +G + +A
Sbjct: 185 LVSKNAMVAACCREGKMDMA 204
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 163/475 (34%), Positives = 260/475 (54%), Gaps = 41/475 (8%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
+A L + M G P+ T+ +L A S L++G IHG V K+GLD N + VG
Sbjct: 103 DALLVYKTMYTQGFVPDMYTYPCVLK--ASSRSDSLWVGLQIHGAVLKIGLDLN-LYVGN 159
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR------------ 170
L+ MY K + A V D + + +WN+M+ Y + G A+
Sbjct: 160 GLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKP 219
Query: 171 -------------------------MFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
MF ++ + ISW ++ +V +EA+ + +
Sbjct: 220 NDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQ 279
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
M+ +GVEPD V+I+SVL A ++ L +G +H++ ++ N+ + N LID+Y++CGC
Sbjct: 280 MEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGC 339
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+ AR VF +M R +VSW SII + G +A+ F M+ G PD ++F L A
Sbjct: 340 LRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAA 399
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
CSHAGL++DG YF++M + ++P++EH+ C+VDL RAG++++A + MP++P+E
Sbjct: 400 CSHAGLLDDGRYYFNLMAEC-GITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDER 458
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
V G LL+ACR ++ + L+ L+P YVLL+N+YA G+W IR M+
Sbjct: 459 VWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIME 518
Query: 446 GRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+GI+K PG+S++E+ G+H F+AGD SH +S+ IY L++L +K GY+PET
Sbjct: 519 RKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKELGYMPET 573
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 140/297 (47%), Gaps = 11/297 (3%)
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y G+ A +FDE+ ++ + + ++ +V +++AL ++ M G PD T
Sbjct: 64 YAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTY 123
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
VL A + +L +GL IH VLK N+ V N LI +Y +C ++ A+QV +
Sbjct: 124 PCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPC 183
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R +VSWNS++ +A NG +ALE M+ KP+ + L A ++ D + Y
Sbjct: 184 RDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNT--TSDNVLY 241
Query: 339 F-DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAAC 394
++ K+ + S + + ++ +Y ++A+ + M ++P+ V + S+L A
Sbjct: 242 VKEMFLKLTKKS--VISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAY 299
Query: 395 RTKGDIILAERLMKYL--VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+ L R+ K+ L P + L+ +MYA G A + M+ R +
Sbjct: 300 GDLSALSLGRRVHKFAERKKLLPNLLLENALI-DMYAKCGCLRDARAVFNQMQFRDV 355
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 114/273 (41%), Gaps = 48/273 (17%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTR-MTLHGTNPNHITFITLLSGCADFPS-QCLFLGA 102
V W S +S + ++GR + ALE R M PN T +LL + S L++
Sbjct: 186 VVSWNSMVSVYAQNGRFND-ALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKE 244
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR----------------- 145
M L L + +V+ ++ MY A V++ M
Sbjct: 245 MF------LKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPA 298
Query: 146 ----------------------VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
+ + NA+ID Y + G + A +F++M RD +SW
Sbjct: 299 YGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSW 358
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
T++++ + K G +A+ F EM+ SG+ PD + +SVL AC++ G L G + + +
Sbjct: 359 TSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAE 418
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
++ ++DL R G I+ A ++M
Sbjct: 419 CGITPKLEHFACVVDLLGRAGKIDEAYGFIRQM 451
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 48/277 (17%)
Query: 237 IHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
+H VL Q + N V L+ +Y+ CG AR +F + + +V +N +I + N
Sbjct: 40 LHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNH 99
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI------YRVS 349
+AL + +M +GF PD ++ L A S + + GL+ + KI Y +
Sbjct: 100 LYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGN 159
Query: 350 PRIEHYG------------------------CIVDLYSRAGRLEDALNV---VENMPMKP 382
I YG +V +Y++ GR DAL + +E + +KP
Sbjct: 160 GLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKP 219
Query: 383 NEVVLGSLL-AACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
N+ + SLL A T D +L + M +L V S V++A MY A +
Sbjct: 220 NDCTMASLLPAVTNTTSDNVLYVKEM-FLKLTKKSVISWNVMIA-MYVNNSMPKEAVVLY 277
Query: 442 RTMKGRGIQKK--------PG---LSSIEIGSGIHEF 467
M+ G++ P LS++ +G +H+F
Sbjct: 278 SQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKF 314
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 160/443 (36%), Positives = 266/443 (60%), Gaps = 12/443 (2%)
Query: 57 RSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRN 116
RSG + A F RM + +++ T++SG A G++ V +
Sbjct: 178 RSGSLERARKMFERMPVRDV----MSWTTMISGLARN-------GSVDDAWVLFDAMPER 226
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
NV+ A++ YA+ R++ A +F M ++ +WN MI G+++ D++SA ++FDEMP
Sbjct: 227 NVVSWNAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQLFDEMP 286
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
R+ I+WT ++NG+++ E AL+ F M + G++P+ VT + L+AC+N+ L G
Sbjct: 287 KRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEGQQ 346
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H+ + K + + V +TL++LY++CG I AR VF ++ L+SWN II +A +GF
Sbjct: 347 VHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAYAHHGF 406
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG 356
EA+ + +MQ+ G+KP+ ++ G L+ACSHAGL+++GL+ F+ M K + R EHY
Sbjct: 407 GIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEHYT 466
Query: 357 CIVDLYSRAGRLEDALNVVENMPMKP-NEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
C+VDL SRAGRLEDA ++ +KP + V +LL C + G+ + + K+L++ +P
Sbjct: 467 CLVDLCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCNSHGNESIGDLAAKHLLEAEP 526
Query: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
Y LL N+YA+ GKW A +IR M RG++K+PG S IE+ + +H F++ D+SH
Sbjct: 527 DNAGTYTLLCNIYASAGKWKEAAEIRSEMNVRGLKKQPGCSWIEVANKVHVFVSRDKSHS 586
Query: 476 ESEHIYSMLELLSFDLKLCGYVP 498
ES+ I +L+ + +++ G VP
Sbjct: 587 ESDLINDLLQDIHRIMRMAGTVP 609
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 199/407 (48%), Gaps = 35/407 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADF----PSQCLFLG 101
V WT+ ++ + R G + EA + F R N +T+ LLSG A ++ LF G
Sbjct: 73 VSWTAMVAAYARRGMLQEARVLFDR---PDARRNVVTWTALLSGYARARRVDEAEALFEG 129
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ NV+ +L+ Y GR++ A+ +F+ M V+ + +WN ++ G +R
Sbjct: 130 -----------MAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCGLVR 178
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G +E A +MF+ MPVRD +SWT +++G + G ++A F M E + V+ ++
Sbjct: 179 SGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMP----ERNVVSWNAM 234
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
++ A + L K +D V N +I + + ++ ARQ+F M KR +
Sbjct: 235 ISGYARNHRIEEAL---DLFTKMPIRD-VASWNIMITGFIQNKDLKSARQLFDEMPKRNV 290
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
++W +++ G+ AL+ FN M +G +P+ V+F G+L ACS+ + +G + +
Sbjct: 291 ITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEGQQ---V 347
Query: 342 MKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
+ I + + + + +++LY++ G + A NV + M+ + + ++AA G
Sbjct: 348 HQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFD-FSMEKDLISWNGIIAAYAHHGF 406
Query: 400 IILAERLMKYLVD--LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
I A L K + + P D+ YV L + + G D KI +M
Sbjct: 407 GIEAMHLYKNMQENGYKPN-DATYVGLLSACSHAGLVDEGLKIFESM 452
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 129 AKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV-RDAISWTALL 187
A GR+ A +FD M + +W AM+ Y RRG ++ A +FD R+ ++WTALL
Sbjct: 52 AAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRPDARRNVVTWTALL 111
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTL-GIGLWIHRYVLKQDF 246
+G+ + +EA F M E + V+ ++L A VG + +R ++
Sbjct: 112 SGYARARRVDEAEALFEGM----AERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAG 167
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
N+ +C + R G +E AR++F+RM R ++SW ++I G A NG V +A F++
Sbjct: 168 SWNILLCGLV-----RSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDA 222
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
M + VS+ ++ + IE+ L F M
Sbjct: 223 MPERNV----VSWNAMISGYARNHRIEEALDLFTKM 254
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G + A R+FD MP RD +SWTA++ + +RG +EA F + VT ++L
Sbjct: 55 GRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDR---PDARRNVVTWTALL 111
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+ A + + + + NV NT+++ Y+ G +E A +F RM R
Sbjct: 112 SGYARARRVDEA----EALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAG 167
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN ++ G +G + A + F M D +S+T ++ + G ++D FD M
Sbjct: 168 SWNILLCGLVRSGSLERARKMFERMPVR----DVMSWTTMISGLARNGSVDDAWVLFDAM 223
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ VS + ++ Y+R R+E+AL++ MP++
Sbjct: 224 PERNVVS-----WNAMISGYARNHRIEEALDLFTKMPIR 257
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 247/456 (54%), Gaps = 34/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV WT+ I+ + +G + EA +G P+ T + +L+ CA L G +
Sbjct: 137 TVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD--LATGETV 194
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ G+ +S F A +D Y++ G+
Sbjct: 195 WRAAEQEGI--------------------------------AQSVFVATAAVDLYVKCGE 222
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A +FD+M +DA++W A++ G+ G+ EAL+ F MQ GV PD + L+A
Sbjct: 223 MAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSA 282
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C +G L +G R V +F DN + LID+Y++CG A VFQ+M K+ ++ W
Sbjct: 283 CTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVW 342
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I+G + G A M+K G K + +F G L +C+H GLI+DG RYF M K
Sbjct: 343 NAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTK 402
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y +SPRIEHYGCIVDL SRAG L++A ++++MPM N V+LG+LL C+ + LAE
Sbjct: 403 LYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAE 462
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++ L+ L+P NYV+L+N+Y+ G+W+ A K+R MK +G++K P S +E +
Sbjct: 463 HVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKV 522
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF GD+SH S+ IY L+ L ++K GY P T
Sbjct: 523 HEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTT 558
>gi|115482212|ref|NP_001064699.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|31432332|gb|AAP53975.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113639308|dbj|BAF26613.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|215694632|dbj|BAG89823.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768315|dbj|BAH00544.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 493
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 155/401 (38%), Positives = 247/401 (61%), Gaps = 8/401 (1%)
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
L +H + GL +++ V +L+ MYA LA +FD + + +WNA++DGY
Sbjct: 80 LARAVHAQPLRRGLLPHDLHVSNSLVHMYAACALPGLARRLFDEIPRPNHVSWNALLDGY 139
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-----GVEPD 214
+ D+ +A R+F MP RD +SW+A+++G VK G EAL F M+ + GV +
Sbjct: 140 AKCRDLPAARRVFARMPQRDVVSWSAMIDGCVKCGEHREALAVFEMMEATAARHDGVRAN 199
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
VT++SVL ACA++G L G +HRY+ + F N+++ +L+D+Y++CG I A +VFQ
Sbjct: 200 DVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFPLNIRLATSLVDMYAKCGAIVEALEVFQ 259
Query: 275 RM--HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
+ ++ WN++I G AV+G E+L+ F M+ G PD +++ L+AC H GL+
Sbjct: 260 AVPVENTDVLIWNAVIGGLAVHGMSRESLQMFQKMEHAGVVPDEITYLSLLSACVHGGLV 319
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
++ +F ++ + P +EHY C+VD+ RAGRLE+A VV++MPMKP+ VLG+LL
Sbjct: 320 DEAWSFFRSLEA-QGLRPHVEHYACLVDVLGRAGRLEEAYGVVKSMPMKPSVSVLGALLN 378
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
AC G + L E + + LV L P D Y+ L+N+YA +W A K R+ M+ RG++K
Sbjct: 379 ACHLHGWVELGEAVGRQLVHLQPDHDGRYIGLSNIYAVARRWQEAKKARKVMEERGVKKV 438
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493
PG S I++G GI F+A D++H S IY++L+L++ D+K+
Sbjct: 439 PGFSEIDVGRGICRFIAQDKTHPGSAEIYALLKLIAMDMKM 479
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 240/421 (57%), Gaps = 11/421 (2%)
Query: 90 CADFPSQCLFLGAMIHGLVCKLGL----------DRNNVMVGTALLDMYAKFGRMDLATV 139
C F + +MI+G + L +V++ ++ Y + G M A
Sbjct: 258 CEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARK 317
Query: 140 VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
+F M + WN ++ GY G++E+ +F+EMP R+ SW AL+ G+ G F E
Sbjct: 318 LFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEV 377
Query: 200 LECFREM-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
L F+ M S V P+ T+++VL+ACA +G L +G W+H Y K NV V N L+D
Sbjct: 378 LGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMD 437
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
+Y++CG IE A VF+ M + L+SWN++I G A++ +AL F M+ G KPDG++
Sbjct: 438 MYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGIT 497
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
F G L AC+H GL+EDG YF M Y + P+IEHYGC+VD+ +RAGRLE A V M
Sbjct: 498 FIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKM 557
Query: 379 PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAG 438
P++ + V+ LL ACR ++ LAE ++ L++L+P +NYV+L+N+Y G+W+
Sbjct: 558 PVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVA 617
Query: 439 KIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+++ M+ G +K PG S IE+ + EF + D H + E IY +L L L+ GYVP
Sbjct: 618 RLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGYVP 677
Query: 499 E 499
+
Sbjct: 678 D 678
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 138/315 (43%), Gaps = 39/315 (12%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++FD++P + W ++ G+ + + E + F +M+ + P+ T VL +C
Sbjct: 152 ARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGK 211
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ L G +H +++K F+ N V TLID+YS G + A ++F M +R +V+W S+
Sbjct: 212 INALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSM 271
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF------DI 341
I G+ ++ + A F+ + D V + ++ G + + + F D+
Sbjct: 272 INGYILSADLVSARRLFDLAPER----DVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDV 327
Query: 342 M-----KKIYRVSPRIE---------------HYGCIVDLYSRAGRLEDALNVVENM--- 378
M K Y + +E + ++ Y+ G + L + M
Sbjct: 328 MFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSE 387
Query: 379 -PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN-YV--LLANMYAAVGKW 434
+ PN+ L ++L+AC G + L + + Y G+ N YV L +MYA G
Sbjct: 388 SDVPPNDATLVTVLSACARLGALDLGKWVHVYAE--SSGLKGNVYVGNALMDMYAKCGII 445
Query: 435 DGAGKIRRTMKGRGI 449
+ A + R M + +
Sbjct: 446 ENAISVFRGMDTKDL 460
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 8/183 (4%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
I ++ F+ N + L+ + + + +ARQ+F ++ + WNS+ G+A +
Sbjct: 120 IQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSES 179
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHA-GLIEDGLRYFDIMKKIYRVSPRIEHY 355
E + F M+ +P+ +F L +C LIE + ++K +R +P +
Sbjct: 180 YREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGT- 238
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
++D+YS G + DA + M + N V S++ D++ A RL DL P
Sbjct: 239 -TLIDMYSAGGTVGDAYKIFCEM-FERNVVAWTSMINGYILSADLVSARRLF----DLAP 292
Query: 416 GVD 418
D
Sbjct: 293 ERD 295
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 166/494 (33%), Positives = 263/494 (53%), Gaps = 42/494 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W +S H G E RM G PN + ++L ++ L +G H
Sbjct: 336 VTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELG--FLNMGKETH 393
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V + G D +V VGT+L+DMY K + A VFD M+ ++ F WN+++ GY +G
Sbjct: 394 GYVLRNGFD-CDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMF 452
Query: 166 ESAVRMFDEMPVR---------------------------------------DAISWTAL 186
E A+R+ ++M + +SWTAL
Sbjct: 453 EDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTAL 512
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
++G + G ++L+ F +MQ GV P+ +I +L ACA++ L G IH ++ F
Sbjct: 513 ISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGF 572
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
++V V LID+YS+ ++ A +VF+R+ +TL SWN +I+GFA+ G EA+ FN
Sbjct: 573 IEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNE 632
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
MQK G PD ++FT L+AC ++GLI +G +YFD M YR+ PR+EHY C+VDL RAG
Sbjct: 633 MQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAG 692
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN 426
L++A +++ MP+KP+ + G+LL +CR ++ AE K L L+P +NY+L+ N
Sbjct: 693 YLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMN 752
Query: 427 MYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLEL 486
+Y+ +W+ +R M G++ + S I+I +H F + ++ H ++ IY L
Sbjct: 753 LYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQ 812
Query: 487 LSFDLKLCGYVPET 500
L ++K GYVP+
Sbjct: 813 LVSEMKKLGYVPDV 826
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 183/362 (50%), Gaps = 12/362 (3%)
Query: 43 NP-TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP + W +I + +S ++ + F +M T + +L C + L
Sbjct: 196 NPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGA--LNAA 253
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHG V + GLD ++V + L+ MY+K G+++LA VFD+M +++ +WN+MI Y
Sbjct: 254 KQIHGYVFRFGLD-SDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAA 312
Query: 162 RGDIESAVRMFDEMPVRDA----ISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
G + A +F E+ D ++W LL+G GY EE L + MQ G +P+ +
Sbjct: 313 LGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSS 372
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+ SVL A + +G L +G H YVL+ F +V V +LID+Y + + A+ VF M
Sbjct: 373 MTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMK 432
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
R + +WNS++ G++ G +AL N M+KEG KPD V++ G ++ + G ++ L
Sbjct: 433 NRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALA 492
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK---PNEVVLGSLLAAC 394
K + ++P + + ++ S+AG D+L M + PN + LL AC
Sbjct: 493 VLHQTKSL-GLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRAC 551
Query: 395 RT 396
+
Sbjct: 552 AS 553
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 157/379 (41%), Gaps = 76/379 (20%)
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
++LG IHG + K G D LD+Y + A+++
Sbjct: 149 IWLGMEIHGCLIKRGFD----------LDVYLRC----------------------ALMN 176
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
Y R +E A ++F EMP +A+ W + ++ ++ +E FR+MQ S ++ + T
Sbjct: 177 FYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETAT 236
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I+ VL AC +G L IH YV + +V +CN LI +YS+ G +E AR+VF M
Sbjct: 237 IVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSME 296
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYF--------------------------------- 304
R SWNS+I +A GF+ +A F
Sbjct: 297 NRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLN 356
Query: 305 --NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVD 360
MQ EGFKP+ S T L A S G + G + + R + Y ++D
Sbjct: 357 ILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGK---ETHGYVLRNGFDCDVYVGTSLID 413
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
+Y + L A V +NM + N SL++ KG A RL+ + G+ +
Sbjct: 414 MYVKNHSLTSAQAVFDNMKNR-NIFAWNSLVSGYSFKGMFEDALRLLNQME--KEGIKPD 470
Query: 421 YVLLANMYAAVGKWDGAGK 439
V M + W G GK
Sbjct: 471 LVTWNGMISGYAMW-GCGK 488
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 139/327 (42%), Gaps = 18/327 (5%)
Query: 143 AMRVKSSFTWNA------MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR-GY 195
A +K WN +I Y+ GD SA +F R+ + W + + F G
Sbjct: 54 AQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGS 113
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
LE F+E+ GV D L C V + +G+ IH ++K+ F +V +
Sbjct: 114 LHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCA 173
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
L++ Y RC +E A QVF M + WN I+ + + + +E F MQ K +
Sbjct: 174 LMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAE 233
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC--IVDLYSRAGRLEDALN 373
+ L AC G + + I ++R + C ++ +YS+ G+LE A
Sbjct: 234 TATIVRVLQACGKMGALNAAKQ---IHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARR 290
Query: 374 VVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL--VDLDPGVDSNYVLLANMYAAV 431
V ++M + N S++++ G + A L L D+ P + + LL+ +
Sbjct: 291 VFDSMENR-NTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLH- 348
Query: 432 GKWDGAGKIRRTMKGRGIQKKPGLSSI 458
G + I + M+G G KP SS+
Sbjct: 349 GYKEEVLNILQRMQGEGF--KPNSSSM 373
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 142/336 (42%), Gaps = 73/336 (21%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ IS ++G ++ F +M G PN + LL CA L G I
Sbjct: 506 VVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASL--SLLQKGKEI 563
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H L + G +V V TAL+DMY+K + A VF ++ K+ +WN MI G+ G
Sbjct: 564 HCLSIRNGFIE-DVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGL 622
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A+ +F+EM Q GV PD +T ++L+A
Sbjct: 623 GKEAISVFNEM-------------------------------QKVGVGPDAITFTALLSA 651
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C N G +G G W K +++I Y R V + H +V
Sbjct: 652 CKNSGLIGEG-W--------------KYFDSMITDY---------RIVPRLEHYCCMVD- 686
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI-MK 343
++G A G++ EA + ++M KPD + L +C I L++ + K
Sbjct: 687 ---LLGRA--GYLDEAWDLIHTMP---LKPDATIWGALLGSCR----IHKNLKFAETAAK 734
Query: 344 KIYRVSP-RIEHYGCIVDLYSRAGRLEDALNVVENM 378
++++ P +Y +++LYS R ED ++ E M
Sbjct: 735 NLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELM 770
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 254/447 (56%), Gaps = 35/447 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF-LGAM 103
T W + I +S A +++M P+ TF +L C C +G
Sbjct: 43 TFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRL---CWVKMGFG 99
Query: 104 IHGLVCKLGLDRN------------------------------NVMVGTALLDMYAKFGR 133
+HG V +LG + N +V+ +AL YA+ G
Sbjct: 100 VHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGE 159
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR 193
+ +A +FD M VK +WN MI GY +RG++ESA ++FDE+P RD ++W A++ G+V
Sbjct: 160 LGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLC 219
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD-NVKV 252
G ++ALE F EM+ G PD VT++S+L+AC ++G L G IH + + F+D +V +
Sbjct: 220 GSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLL 279
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
N LID+Y++CG I A +VFQ M ++ + +WNS++ G A +G +++ F M+K
Sbjct: 280 GNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKI 339
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
+PD ++F G L ACSHAG +E+G +YFD+M+ Y + P I HYGC+VDL RAG L +A
Sbjct: 340 RPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAF 399
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
+ ++ M ++PN +V +LL ACR G++ L R L+ + +YVLL+N+YA+ G
Sbjct: 400 DFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRG 459
Query: 433 KWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+WDG K+R+ M G++K+ G S IE
Sbjct: 460 EWDGVEKVRKLMDDSGVRKEAGCSLIE 486
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 18/294 (6%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G + A ++F + D W ++ G + A+ + +M+ V PD T VL
Sbjct: 26 GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVL 85
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC + + +G +H V + F+ N V NTLI ++ CG + AR +F KR +V
Sbjct: 86 KACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVV 145
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+W+++ G+A G +G A + F+ M + D VS+ +T + G +E + FD +
Sbjct: 146 AWSALTAGYARRGELGVARQLFDEMPVK----DLVSWNVMITGYAKRGEMESARKLFDEV 201
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK---PNEVVLGSLLAACRTKGD 399
K V+ + ++ Y G + AL + E M P+EV + SLL+AC GD
Sbjct: 202 PKRDVVT-----WNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGD 256
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLAN----MYAAVGKWDGAGKIRRTMKGRGI 449
+ +R+ + ++ G VLL N MYA G A ++ + M+ + +
Sbjct: 257 LDAGQRIHCCISEM--GFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDV 308
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 157/442 (35%), Positives = 254/442 (57%), Gaps = 7/442 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA--DFPSQCLFLGAM 103
+ W S I+ G +A + F +M + T+L C+ D+ S G +
Sbjct: 345 ISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYAST----GEL 400
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+HG K G+ ++ VG A++ MYAK G D A +VF M ++++ +W AMI + R G
Sbjct: 401 LHGYTIKSGMG-SSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSG 459
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
DI A FD MP R+ ++W ++L+ +V+ G+ EE L+ + M+ +GV+PD++T + +
Sbjct: 460 DIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIR 519
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA++ + +G+ + + K NV V N+++ +YSRCG I+ A+ F + + L+S
Sbjct: 520 ACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLIS 579
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN+++ FA NG + ++ F M K KP+ +S+ L+ CSH GL+ +G YFD M
Sbjct: 580 WNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMT 639
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+++ +SP EH+ C+VDL RAG LE A +++E MP KPN V +LL +CR D+ LA
Sbjct: 640 RVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLA 699
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E K L++LD YVLL+NMY+ G+ D +R+ MK +GI+ G S IE+ +
Sbjct: 700 ETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNR 759
Query: 464 IHEFMAGDRSHIESEHIYSMLE 485
+H F + SH + + +Y LE
Sbjct: 760 VHVFTVDETSHPQIKEVYLKLE 781
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 201/418 (48%), Gaps = 22/418 (5%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLH----GTNPNHITFITLLSGCADFPSQC 97
V +V WT+ IS + ++G + + F+ M G N + +F +++ C
Sbjct: 104 VKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDS- 162
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L +H LV KLG + +++ MY K G +DLA VF + S F WN+MI
Sbjct: 163 -RLAIQLHALVSKLGFGMETC-IQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIY 220
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GY + A+++F+ MP RD +SW L++ F + G+ + L F EM G P+++T
Sbjct: 221 GYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMT 280
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
SVL+ACA+ L G +H +L+ + ++ N LID+Y++CGC++ A++VF+ +
Sbjct: 281 YGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLR 340
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-- 335
+ +SWNS+I G G +AL FN M++ D L CS G
Sbjct: 341 EHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGEL 400
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
L + I + +P I+ +Y++ G + A V MP++ N + +++ A
Sbjct: 401 LHGYTIKSGMGSSAPV---GNAIITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITAFS 456
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANM---YAAVGKWDGAGKIRRTMKGRGIQ 450
GDI A + D+ P + N V +M Y G + K+ +M+ G+Q
Sbjct: 457 RSGDIGKA----RGYFDMMP--ERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQ 508
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 170/386 (44%), Gaps = 71/386 (18%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + IS + G + F M G +PN +T+ ++LS CA + L GA +H
Sbjct: 244 VSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACA--STSDLKWGAHLH 301
Query: 106 GLVCKL--GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+ ++ LD ++ G L+DMYA + G
Sbjct: 302 ARILRMEHSLD---LVFGNGLIDMYA-------------------------------KCG 327
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
++ A R+F + D ISW +L+ G V G E+AL F +M+ S V D + ++L
Sbjct: 328 CLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILG 387
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC-------------------- 263
C+ G +H Y +K + V N +I +Y++C
Sbjct: 388 VCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTIS 447
Query: 264 -----------GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
G I AR F M +R +V+WNS++ + NGF E L+ + SM+ G
Sbjct: 448 WTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGV 507
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
+PD ++FT ++ AC+ +++ G++ K + +S + IV +YSR G +++A
Sbjct: 508 QPDWITFTTSIRACADLAIVKLGMQVVTHATK-FGLSLNVSVANSIVTMYSRCGLIKEAK 566
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKG 398
N +++ K + + ++LAA G
Sbjct: 567 NTFDSIDDK-DLISWNAMLAAFAQNG 591
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 138/291 (47%), Gaps = 42/291 (14%)
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR--DAISWT 184
MY+ G A VF ++ FTWN MI + + A ++FDEMPVR D++SWT
Sbjct: 52 MYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWT 111
Query: 185 ALLNGFVKRGYFEEALECF----REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
+++G+ + G+ + E F R+ G D + SV+ AC ++G + + +H
Sbjct: 112 TMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHAL 171
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFAR------------------------------ 270
V K F + N+++ +Y +CG ++ A
Sbjct: 172 VSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKA 231
Query: 271 -QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
Q+F RM +R VSWN++I F+ +GF + L F M +GF P+ +++ L+AC+
Sbjct: 232 LQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAST 291
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENM 378
++ G + +I R+ ++ ++D+Y++ G L+ A V +++
Sbjct: 292 SDLKWGAH---LHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSL 339
>gi|326506208|dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 582
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 163/438 (37%), Positives = 246/438 (56%), Gaps = 11/438 (2%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCAD---FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTAL 124
F + G +P+ I + L+ CA +P+ A +HG K G + V L
Sbjct: 63 FDHLLRSGADPDPIAYALALARCARERAYPA-----AAQLHGHAAKRGAASHR-RVRNGL 116
Query: 125 LDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWT 184
+ Y+ G + A VFD WN ++ GY + D + F +MP RD++SW
Sbjct: 117 IHAYSVCGMLFDARKVFDHGPEVDMIAWNCLLRGYAQGRDTGALREFFAQMPARDSVSWN 176
Query: 185 ALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
++ V G EEA+ FREM S +PD VT++SV++A A +G L GLW H YV +
Sbjct: 177 TVIAWCVANGEHEEAVAVFREMLASNECQPDRVTLVSVISAIAYLGALAQGLWAHAYVCR 236
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK-RTLVSWNSIIVGFAVNGFVGEALE 302
++ + + K+ + LI++YS+CG IE A VF+ R++ +WN+++ GF +G ALE
Sbjct: 237 KEIEVDEKLSSALINMYSKCGFIEGAVYVFENSCALRSVDTWNAMLAGFTASGCSERALE 296
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M+ GF P+ ++F L ACSH G +E+G+ YF+ M + P I HYGC+VDL+
Sbjct: 297 LFTRMESSGFVPNKITFNTLLNACSHGGFVEEGIGYFERMTNSSSIEPDIAHYGCMVDLF 356
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
RAG E A +++ MPM+P+ V +L+ ACRT + L ++ L++ P + YV
Sbjct: 357 CRAGLFEKAEEMIQMMPMEPDAAVWKALVGACRTYSNFELGKKAGHRLIEAAPNDHAGYV 416
Query: 423 LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS 482
LL+N+YA G W G K+R+ M G+QK PG SSIE+ IHEF++GD+SH +Y
Sbjct: 417 LLSNIYALDGNWKGVYKVRKLMLNCGVQKVPGSSSIELDGVIHEFISGDKSHSRKRDVYE 476
Query: 483 MLELLSFDLKLCGYVPET 500
ML + LK+ GY P+T
Sbjct: 477 MLSEICQQLKVAGYAPDT 494
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 35/212 (16%)
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
AL F + SG +PD + L CA +H + K+ + +V N LI
Sbjct: 59 ALRLFDHLLRSGADPDPIAYALALARCARERAYPAAAQLHGHAAKRGAASHRRVRNGLIH 118
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM----------- 307
YS CG + AR+VF + +++WN ++ G+A G E+F M
Sbjct: 119 AYSVCGMLFDARKVFDHGPEVDMIAWNCLLRGYAQGRDTGALREFFAQMPARDSVSWNTV 178
Query: 308 ---------QKEGF------------KPDGVSFTGALTACSHAGLIEDGL-RYFDIMKKI 345
+E +PD V+ ++A ++ G + GL + + +K
Sbjct: 179 IAWCVANGEHEEAVAVFREMLASNECQPDRVTLVSVISAIAYLGALAQGLWAHAYVCRKE 238
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
V ++ ++++YS+ G +E A+ V EN
Sbjct: 239 IEVDEKLS--SALINMYSKCGFIEGAVYVFEN 268
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 168/479 (35%), Positives = 270/479 (56%), Gaps = 29/479 (6%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA-------------D 92
V W + + R R+ +A F RM + + I++ +++G A +
Sbjct: 216 VSWNCLMGGYVRKKRLDDARSLFDRMPVR----DKISWNIMITGYAQNGLLSEARRLFEE 271
Query: 93 FPSQCLF-LGAMIHGLVCKLGLDR----------NNVMVGTALLDMYAKFGRMDLATVVF 141
P + +F AM+ G V LD N + A++ Y + +++ A +F
Sbjct: 272 LPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF 331
Query: 142 DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALE 201
D M +++ +WN M+ GY + G+I+ A +FDEMP RD ISW A+++G+ + G EEAL
Sbjct: 332 DQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALH 391
Query: 202 CFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
F +M+ G + + L++CA + L +G +H ++K F+ N L+ +Y
Sbjct: 392 LFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYG 451
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
+CG IE A VF+ + ++ +VSWN++I G+A +GF EAL F SM K KPD V+ G
Sbjct: 452 KCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVG 510
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+ACSH GL++ G+ YF+ M + Y ++ +HY C++DL RAGRL++ALN++++MP
Sbjct: 511 VLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFY 570
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
P+ G+LL A R GD L E+ + + +++P YVLL+N+YAA G+W ++R
Sbjct: 571 PDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMR 630
Query: 442 RTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
M+ +G++K PG S +EI + H F GD SH E+E IY+ LE L +LK G+V T
Sbjct: 631 SKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSST 689
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 129/532 (24%), Positives = 221/532 (41%), Gaps = 130/532 (24%)
Query: 33 IQTNNSKSTV--NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSG- 89
+++ NS ST+ + V+W IS + R G+ A F M T +T+ ++SG
Sbjct: 46 LESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRST----VTYNAMISGY 101
Query: 90 -------CA-----DFPSQCLF-LGAMIHGLVCKLGLD----------RNNVMVGTALLD 126
CA P + L M+ G V L +V+ A+L
Sbjct: 102 LSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLS 161
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR---------------- 170
+A+ G ++ A +FD M VK+ +WN ++ Y++ G IE A R
Sbjct: 162 GFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCL 221
Query: 171 ---------------MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
+FD MPVRD ISW ++ G+ + G EA F E+ I V +
Sbjct: 222 MGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFA-W 280
Query: 216 VTIIS--VLNACANVGT-----------LGIGLWIHRYVLKQDFKD-----------NVK 251
++S V N + T + I YV Q + N
Sbjct: 281 TAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTS 340
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
NT++ Y++CG I+ A+ +F M +R +SW ++I G+A +G EAL F M+++G
Sbjct: 341 SWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDG 400
Query: 312 FKPDGVSFTGALTACS-----------HAGLIEDGLRY---------------------F 339
+ + AL++C+ H L++ G + F
Sbjct: 401 GILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAF 460
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM--KPNEVVLGSLLAACRTK 397
D+ + I I + ++ Y+R G ++AL + E+M M KP++V L +L+AC
Sbjct: 461 DVFEDI--TEKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHT 518
Query: 398 GDIILAERLMKYLVDL--DPGVDSN---YVLLANMYAAVGKWDGAGKIRRTM 444
G L ++ M+Y + + G+ +N Y + ++ G+ D A + ++M
Sbjct: 519 G---LVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSM 567
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 171/366 (46%), Gaps = 34/366 (9%)
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
G+ R + + A++ Y + D A VF+ M + +WN M+ GY++ G++ +A +
Sbjct: 85 GMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARAL 144
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTL 231
F++MP +D +SW A+L+GF + G+ EEA + F +M + + ++ +L+A G +
Sbjct: 145 FNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLV----KNEISWNGLLSAYVQNGRI 200
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
R + + N L+ Y R ++ AR +F RM R +SWN +I G+
Sbjct: 201 EDA----RRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGY 256
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR 351
A NG + EA F + D ++T ++ G++++ R F+ M + VS
Sbjct: 257 AQNGLLSEARRLFEELPIR----DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS-- 310
Query: 352 IEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
+ ++ Y ++ ++E A + + MP + N +++ G+I A K L
Sbjct: 311 ---WNAMIAGYVQSQQIEKARELFDQMPSR-NTSSWNTMVTGYAQCGNIDQA----KILF 362
Query: 412 DLDPGVDS-NYVLLANMYAAVGKWDGA-----------GKIRRTMKGRGIQKKPGLSSIE 459
D P D ++ + + YA G+ + A G + R+ + ++++E
Sbjct: 363 DEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALE 422
Query: 460 IGSGIH 465
+G +H
Sbjct: 423 LGKQLH 428
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 246/436 (56%), Gaps = 38/436 (8%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCA-DFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD 126
++RM +PN T+ L+ C D+ + G IH V K G
Sbjct: 82 YSRMLHKSVSPNKFTYPPLIRACCIDYAIE---EGKQIHAHVLKFG-------------- 124
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD--AISWT 184
FG F+ N +I Y+ +E A R+FD MP RD ++SW
Sbjct: 125 ----FG--------------ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWN 166
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
A++ +V+ EA F M++ V D S+L+AC +G L G WIH Y+ K
Sbjct: 167 AMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKS 226
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
+ + K+ T+ID+Y +CGC+E A +VF + ++ + SWN +I G A++G A+E F
Sbjct: 227 GIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELF 286
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
M++E PDG++F L+AC+H+GL+E+G YF M ++ + P +EH+GC+VDL R
Sbjct: 287 KEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGR 346
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLL 424
AG LE+A ++ MP+ P+ VLG+L+ ACR G+ L E++ K +++L+P YVLL
Sbjct: 347 AGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLL 406
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
AN+YA+ G+W+ K+R+ M RG++K PG S IE SG+ EF+AG R+H +++ IY+ L
Sbjct: 407 ANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKL 466
Query: 485 ELLSFDLKLCGYVPET 500
+ + ++ GYVP+T
Sbjct: 467 DEILETIRSIGYVPDT 482
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 145/357 (40%), Gaps = 73/357 (20%)
Query: 24 NLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITF 83
N + Q +N +V W + I+ + +S R+ EA F RM L +
Sbjct: 141 NFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVA 200
Query: 84 ITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDA 143
++LS C + L G IHG + K G++ ++ + T ++DMY K G ++ A+ VF+
Sbjct: 201 ASMLSACTGLGA--LEQGKWIHGYIEKSGIELDSKLA-TTVIDMYCKCGCLEKASEVFNE 257
Query: 144 MRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF 203
+ K +WN MI G G E+A+ +F EM
Sbjct: 258 LPQKGISSWNCMIGGLAMHGKGEAAIELFKEME--------------------------- 290
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSR 262
REM V PD +T ++VL+ACA+ G + G +Y+ + K ++ ++DL R
Sbjct: 291 REM----VAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGR 346
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
G +E AR++ M VN PD
Sbjct: 347 AGLLEEARKLINEM---------------PVN-------------------PDAGVLGAL 372
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIE-HYGCIVDLYSRAGRLEDALNVVENM 378
+ AC G E G + I KK+ + P Y + +LY+ AGR ED V + M
Sbjct: 373 VGACRIHGNTELGEQ---IGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLM 426
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 8/210 (3%)
Query: 179 DAISWTALLNGFVKRGY--FEEALEC---FREMQISGVEPDYVTIISVLNACANVGTLGI 233
DA+ K GY ++ A C + M V P+ T ++ AC +
Sbjct: 53 DAMGRVIKFCAISKSGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEE 112
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK--RTLVSWNSIIVGF 291
G IH +VLK F + N LI +Y +E AR+VF M + R VSWN++I +
Sbjct: 113 GKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAY 172
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR 351
+ + EA F+ M+ E D L+AC+ G +E G ++K +
Sbjct: 173 VQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEK-SGIELD 231
Query: 352 IEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ ++D+Y + G LE A V +P K
Sbjct: 232 SKLATTVIDMYCKCGCLEKASEVFNELPQK 261
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 264/455 (58%), Gaps = 39/455 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S IS + + G EA F M G P+ +T +++L C D L LG +
Sbjct: 195 VSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGD--LGLGRWVE 252
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V + ++ N+ M G+AL+DM Y + GD+
Sbjct: 253 GFVLEKKMEVNSYM-GSALIDM-------------------------------YGKCGDL 280
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
SA R+FD MP +D ++W A++ G+ + G EA+ F M+ +G PD VT+I VL+AC
Sbjct: 281 ISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSAC 340
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ +G L +G W+ + ++ + +V V + LID+Y++CG ++ A +VF+ M + VSWN
Sbjct: 341 STIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWN 400
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEG--FKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
++I A +G EAL F M K+ +P+ ++F G L+AC HAGL+++G + F+ M
Sbjct: 401 AMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMN 460
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ + P++EHY C+VDL +RAG L +A ++++ MP KP+E+VLGSLL AC+ + + +
Sbjct: 461 LSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVG 520
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
ER+++ ++++ NYV+ + +YA + +WD + K+R M+ G+ K PG S I+IG+
Sbjct: 521 ERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAH 580
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+HEF AGD H S +IY +LL+ ++K GY+P
Sbjct: 581 VHEFHAGDSLHNHSMNIY---QLLNEEMKREGYIP 612
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 201/377 (53%), Gaps = 18/377 (4%)
Query: 61 IAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNN--- 117
+A A+L F ++T PN F +L G A + F + + L LGL NN
Sbjct: 77 LAYASLVFNQLT----KPNIYAFNVMLRGLATTWKKYDFCVELYYKLK-SLGLKANNFTY 131
Query: 118 ----VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
+ G ++ K G +VF A + +++I Y R G++ A ++FD
Sbjct: 132 PFLFIACGNVRGLVHGKIGH----CLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFD 187
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI 233
EM RD +SW ++++G+ K G+ +EA+ F EM+ G EPD +T++SVL AC ++G LG+
Sbjct: 188 EMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGL 247
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV 293
G W+ +VL++ + N + + LID+Y +CG + AR+VF M + +V+WN+II G+A
Sbjct: 248 GRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQ 307
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE 353
NG EA+ FN M++ G PD V+ L+ACS G ++ G ++ + + +
Sbjct: 308 NGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLG-KWVETHASEKGLQHDVY 366
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
++D+Y++ G L+DA+ V E+MP K NEV ++++A G A L + +
Sbjct: 367 VASALIDMYAKCGSLDDAVRVFESMPHK-NEVSWNAMISALAFHGQAQEALSLFRRMSKD 425
Query: 414 DPGVDSNYVLLANMYAA 430
+ V N + + +A
Sbjct: 426 NGTVQPNDITFIGVLSA 442
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 249/450 (55%), Gaps = 34/450 (7%)
Query: 35 TNNSKSTVNP-TVQWTSSISRHCRSGRIAEAALEFTR-MTLHGTNPNHITFITLLSGCAD 92
TN +T NP T W +I S EA + + R + GT P++ T+ L CA
Sbjct: 104 TNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACAR 163
Query: 93 FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTW 152
+ +G+ I G V LG D +++ V A++ + G +D A +FD V+ +W
Sbjct: 164 L--SLIRMGSEILGHVLHLGFD-SDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSW 220
Query: 153 NAMIDGY-----------------------------MRRGDIESAVRMFDEMPVRDAISW 183
N+MI+GY + G ++ A ++FDEMP +D + W
Sbjct: 221 NSMINGYCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPW 280
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
A++ G+V +EAL F EMQ + PD VT++S L+AC+ +G L +G+WIH Y+ K
Sbjct: 281 NAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK 340
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
+ NV + LID+Y++CG I A QVFQ + R ++W +II G A++G A+ Y
Sbjct: 341 HELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAY 400
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F+ M PD V+F G L+AC H GL+E+G +YF M + +SP+++HY C+VDL
Sbjct: 401 FSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLG 460
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
RAG LE+A ++++MP++ + VV G+L ACR G++++ ER L+ +DP YVL
Sbjct: 461 RAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVL 520
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKP 453
LANMY W AGK R+ M+ RG++K P
Sbjct: 521 LANMYGEAEMWKEAGKARKLMRQRGVEKTP 550
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 165/376 (43%), Gaps = 53/376 (14%)
Query: 76 TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMD 135
+NP F++LL C M+ + + G + ++ A+ +++ +D
Sbjct: 50 SNP----FLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAI----SEWRDLD 101
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
T + R ++F+WN I G++ + AV ++
Sbjct: 102 YCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYK---------------------- 139
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
R +Q G +PD T + ACA + + +G I +VL F ++ V N
Sbjct: 140 --------RVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNA 191
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
+I L CG ++ AR++F + R LVSWNS+I G+ G + A + F+SM +
Sbjct: 192 VIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYC--GNLESARKLFDSMTNKTM--- 246
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL--- 372
VS+T + + +GL++ + FD M V P + ++ Y A R ++AL
Sbjct: 247 -VSWTTMVVGYAQSGLLDMAWKLFDEMPD-KDVVP----WNAMIGGYVHANRGKEALALF 300
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-VLLANMYAAV 431
N ++ M + P+EV + S L+AC G + + + Y+ + ++ L +MYA
Sbjct: 301 NEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKC 360
Query: 432 GKWDGAGKIRRTMKGR 447
GK A ++ + + GR
Sbjct: 361 GKITKAIQVFQELPGR 376
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 176/464 (37%), Positives = 259/464 (55%), Gaps = 39/464 (8%)
Query: 41 TVNPTVQ-WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
T NP V +T+ I SG +A ++RM P++ ++L C L
Sbjct: 90 THNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGS--QLALR 147
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
G +H KLGL N +V ++++Y K G +
Sbjct: 148 EGREVHSRALKLGLSSNR-LVRLRIMELYGKCGEL------------------------- 181
Query: 160 MRRGDIESAVRMFDEMP----VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
GD A R+F+EMP +D + WTA+++GFV+ ALE FR MQ V P+
Sbjct: 182 ---GD---ARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNE 235
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
TI+ VL+AC+ +G L IG W+H Y+ K + + N+ V N LI++YSRCG I+ A+ VF
Sbjct: 236 FTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDE 295
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M R ++++N++I G ++NG +A+E F M +P V+F G L ACSH GL++ G
Sbjct: 296 MKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFG 355
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
+ F M + Y V P+IEHYGC+VDL R GRLE+A +++ M M P+ ++LG+LL+AC+
Sbjct: 356 FKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACK 415
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
++ L E++ K L D YVLL+++YA+ GKW A ++R MK G+QK+PG
Sbjct: 416 MHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGC 475
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
SSIE+ + IHEF+ GD H E IY LE L+ L+L GY PE
Sbjct: 476 SSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPE 519
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 142/322 (44%), Gaps = 43/322 (13%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A R+F + +TAL++GFV G + +A++ + M + PD + S+L A
Sbjct: 80 IDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKA 139
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK----RT 280
C + L G +H LK N V +++LY +CG + AR+VF+ M + +
Sbjct: 140 CGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKD 199
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
V W ++I GF N + ALE F MQ E +P+ + L+ACS G +E G
Sbjct: 200 TVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHS 259
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP--------------------- 379
M+K + + + ++++YSR G +++A V + M
Sbjct: 260 YMRK-FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSR 318
Query: 380 -------------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD---SNYVL 423
++P V +L AC G + ++ + D GV+ +Y
Sbjct: 319 QAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTR-DYGVEPQIEHYGC 377
Query: 424 LANMYAAVGKWDGAGKIRRTMK 445
+ ++ VG+ + A + RTMK
Sbjct: 378 MVDLLGRVGRLEEAYDLIRTMK 399
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 110/277 (39%), Gaps = 47/277 (16%)
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
D IIS+L ++ + L IH +++ + + L+ S+C I++A ++F
Sbjct: 31 DQKQIISLLQRSKHINQV---LPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIF 87
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
Q H + + ++I GF +G +A++ ++ M + PD L AC +
Sbjct: 88 QYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALR 147
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP-------------- 379
+G K+ S R+ I++LY + G L DA V E MP
Sbjct: 148 EGREVHSRALKLGLSSNRLVRLR-IMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAM 206
Query: 380 ------------------------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
++PNE + +L+AC G + + + Y+ +
Sbjct: 207 IDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFE- 265
Query: 416 GVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
++ N + L NMY+ G D A + MK R +
Sbjct: 266 -IELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDV 301
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 259/461 (56%), Gaps = 36/461 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + IS + +G EA F M P+ T +T++S CA S + LG
Sbjct: 197 VKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQ--SGSIQLG 254
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + GL N +V NA+ID Y +
Sbjct: 255 RQVHSWIDDHGLGSNLKIV--------------------------------NALIDLYSK 282
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++E+A +F + +D ISW ++ G+ ++EAL F+EM SG P+ VT++S+
Sbjct: 283 CGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSI 342
Query: 222 LNACANVGTLGIGLWIHRYVLK--QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACA +G + G WIH Y+ K + + + +LID+Y++CG IE A QVF MH R
Sbjct: 343 LPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHR 402
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
TL + N++I GFA++G A + F+ M+K G +PD ++F G L+ACSH+G+++ G R F
Sbjct: 403 TLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIF 462
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M + Y+++P++EHYGC++DL G ++A ++ M M+P+ V+ SLL AC+ G+
Sbjct: 463 RSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGN 522
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E + L+ ++P +YVLL+N+YA G+W+ IR + +G++K PG SSIE
Sbjct: 523 VELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIE 582
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I S +HEF+ GD+ H + IY MLE + L+ G+VP+T
Sbjct: 583 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 623
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 209/403 (51%), Gaps = 14/403 (3%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + H S A + M G PN TF LL CA + G IHG
Sbjct: 71 WNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKL--KVSKEGQQIHGH 128
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG + + + V T+L+ MY K GR A VFD + ++ A+I GY RG IES
Sbjct: 129 VLKLGYELD-LYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIES 187
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +MFDE+PV+D +SW A+++G+ G +EAL+ F+EM + V+PD T+++V++ACA
Sbjct: 188 AQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQ 247
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G++ +G +H ++ N+K+ N LIDLYS+CG +E A +FQ + + ++SWN++
Sbjct: 248 SGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTM 307
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KKI 345
I G+ EAL F M + G P+ V+ L AC+ G I+ G R+ + K+I
Sbjct: 308 IGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFG-RWIHVYIDKRI 366
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSLLAACRTKGDII 401
V+ ++D+Y++ G +E A V +M + N ++ G + R
Sbjct: 367 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHG-RANAAFD 425
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
+ R+ K ++ D D +V L + + G D +I R+M
Sbjct: 426 IFSRMRKNGIEPD---DITFVGLLSACSHSGMLDLGRRIFRSM 465
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 172/417 (41%), Gaps = 60/417 (14%)
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD---MYAKFGRMD 135
NH + ++LL C S +IH + K GL N + + LL+ + F +
Sbjct: 2 NHPS-LSLLHNCKTLQSL-----RIIHAQMIKTGLHNTNYAL-SRLLEFCILSPNFDGLP 54
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP----VRDAISWTALLNGFV 191
A VF+ ++ + WN M G+ D SA++++ M + ++ ++ LL
Sbjct: 55 YAISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCA 114
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW--IHRYVLKQDFKDN 249
K +E + + G E D S+++ G W H+ +D
Sbjct: 115 KLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGR-----WKDAHKVFDGSSHRDV 169
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
V LI Y+ G IE A+++F + + +VSWN+II G+A G EAL+ F M K
Sbjct: 170 VSY-TALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMK 228
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
KPD + ++AC+ +G I+ G + + + + ++ ++DLYS+ G +E
Sbjct: 229 TNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDD-HGLGSNLKIVNALIDLYSKCGEVE 287
Query: 370 DALNVVENMPMK----------------------------------PNEVVLGSLLAACR 395
A + + + K PN+V + S+L AC
Sbjct: 288 TACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACA 347
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
G I + Y+ GV + L L +MYA G + A ++ +M R +
Sbjct: 348 QLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTL 404
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/463 (34%), Positives = 255/463 (55%), Gaps = 37/463 (7%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
SK+++ + WT+ I+ + + E F +M G PN IT ++L+ C +
Sbjct: 289 SKASI---ISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECG--TAGA 343
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L LG ++H + G + V+ TA +DMY K G
Sbjct: 344 LELGKLLHAFTLRNGFTLSLVL-ATAFIDMYGKCG------------------------- 377
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
D+ SA +FD +D + W+A+++ + + +EA + F M G+ P+ T
Sbjct: 378 ------DVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERT 431
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++S+L CA G+L +G WIH Y+ KQ K ++ + + +D+Y+ CG I+ A ++F
Sbjct: 432 MVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEAT 491
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
R + WN++I GFA++G ALE F M+ G P+ ++F GAL ACSH+GL+++G R
Sbjct: 492 DRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKR 551
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
F M + +P++EHYGC+VDL RAG L++A ++++MPM+PN V GS LAAC+
Sbjct: 552 LFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLH 611
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
+I L E K + L+P VL++N+YA+ +W IRR MK GI K+PG+SS
Sbjct: 612 KNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSS 671
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IE+ +HEF+ GDR H +++ +Y M++ + L+ GY P+
Sbjct: 672 IEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDV 714
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 214/492 (43%), Gaps = 88/492 (17%)
Query: 11 PQPFLPH-QQNPNQNLTTTPQIS---IQTNNSKSTVNPTVQWTSS----------ISRHC 56
P+P +PH QQ + NL T Q+ I+T+++ S P S I+ +
Sbjct: 41 PKPNVPHIQQELHINLNETQQLHGHFIKTSSNCSYRVPLAALESYSSNAAIHSFLITSYI 100
Query: 57 RSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRN 116
++ A+AA + M T ++ ++L C PS LG +HG V K G
Sbjct: 101 KNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPS--FLLGQEVHGFVVKNGF-HG 157
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
+V V AL+ MY++ G + LA + +FD++
Sbjct: 158 DVFVCNALIMMYSEVGSLALARL-------------------------------LFDKIE 186
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
+D +SW+ ++ + + G +EAL+ R+M + V+P + +IS+ + A + L +G
Sbjct: 187 NKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKA 246
Query: 237 IHRYVLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
+H YV++ K V +C LID+Y +C + +AR+VF + K +++SW ++I +
Sbjct: 247 MHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHC 306
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-------LR---------- 337
+ E + F M EG P+ ++ + C AG +E G LR
Sbjct: 307 NNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLA 366
Query: 338 --YFDIMKKIYRV-----------SPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MK 381
+ D+ K V S + + ++ Y++ +++A ++ +M ++
Sbjct: 367 TAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIR 426
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAG 438
PNE + SLL C G + + + + Y+ G+ + +L +MYA G D A
Sbjct: 427 PNERTMVSLLMICAKAGSLEMGKWIHSYID--KQGIKGDMILKTSFVDMYANCGDIDTAH 484
Query: 439 KIRRTMKGRGIQ 450
++ R I
Sbjct: 485 RLFAEATDRDIS 496
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 185/440 (42%), Gaps = 71/440 (16%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I + RSG + EA M + P+ I I++ A+ L LG +
Sbjct: 190 VVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELAD--LKLGKAM 247
Query: 105 HGLVCKLG-LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
H V + G ++ V + TAL+DMY K + A VFD + S +W AMI Y+
Sbjct: 248 HAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCN 307
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
++ VR+F +M + G F P+ +T++S++
Sbjct: 308 NLNEGVRLFVKM---------------LGEGMF----------------PNEITMLSLVK 336
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
C G L +G +H + L+ F ++ + ID+Y +CG + AR VF + L+
Sbjct: 337 ECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMM 396
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL---RYFD 340
W+++I +A N + EA + F M G +P+ + L C+ AG +E G Y D
Sbjct: 397 WSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYID 456
Query: 341 --------IMKKIY------------------RVSPR-IEHYGCIVDLYSRAGRLEDALN 373
I+K + + R I + ++ ++ G E AL
Sbjct: 457 KQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALE 516
Query: 374 VVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVD---LDPGVDSNYVLLANM 427
+ E M + PN++ L AC G + +RL +V P V+ +Y + ++
Sbjct: 517 LFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVE-HYGCMVDL 575
Query: 428 YAAVGKWDGAGKIRRTMKGR 447
G D A ++ ++M R
Sbjct: 576 LGRAGLLDEAHELIKSMPMR 595
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 260/467 (55%), Gaps = 37/467 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ ISR+ ++G +EA F M PN TF T+L+ C + L LG I
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSC--IRASGLGLGKQI 175
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HGL+ K D +++ VG++LLDMYAK G
Sbjct: 176 HGLIVKWNYD-SHIFVGSSLLDMYAK-------------------------------AGQ 203
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A +F+ +P RD +S TA++ G+ + G EEALE F + G+ P+YVT S+L A
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
+ + L G H +VL+++ + N+LID+YS+CG + +AR++F M +RT +SW
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISW 323
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFD-IM 342
N+++VG++ +G E LE F M+ E KPD V+ L+ CSH + + GL FD ++
Sbjct: 324 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMV 383
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
Y P EHYGCIVD+ RAGR+++A ++ MP KP VLGSLL ACR + +
Sbjct: 384 AGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDI 443
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
E + + L++++P NYV+L+N+YA+ G+W +R M + + K+PG S I+
Sbjct: 444 GESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQ 503
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
+H F A DR+H E + + ++ +S +K GYVP+ ++ LY+ D
Sbjct: 504 TLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPD-LSCVLYDVD 549
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 175/350 (50%), Gaps = 40/350 (11%)
Query: 33 IQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD 92
I + S S N +Q IS+ C +GR+ EA LE M + G + LL+ C D
Sbjct: 8 IHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLE---MAMLGPEMGFHGYDALLNACLD 64
Query: 93 FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTW 152
+ L G +H M+ T L +++
Sbjct: 65 --KRALRDGQRVHAH-----------MIKTRYL---------------------PATYLR 90
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
++ Y + +E A ++ DEMP ++ +SWTA+++ + + G+ EAL F EM S +
Sbjct: 91 TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK 150
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P+ T +VL +C LG+G IH ++K ++ ++ V ++L+D+Y++ G I+ AR++
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREI 210
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F+ + +R +VS +II G+A G EALE F+ + EG P+ V++ LTA S L+
Sbjct: 211 FECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALL 270
Query: 333 EDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ G + + ++++ +++ ++D+YS+ G L A + +NMP +
Sbjct: 271 DHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSYARRLFDNMPER 318
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 123/263 (46%), Gaps = 9/263 (3%)
Query: 170 RMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVG 229
R F P + ++ G +EAL EM + G E + ++LNAC +
Sbjct: 10 RSFSSSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKR 66
Query: 230 TLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIV 289
L G +H +++K + + L+ Y +C C+E AR+V M ++ +VSW ++I
Sbjct: 67 ALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 126
Query: 290 GFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVS 349
++ G EAL F M + KP+ +F LT+C A + G + ++ K +
Sbjct: 127 RYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK-WNYD 185
Query: 350 PRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKY 409
I ++D+Y++AG++++A + E +P + +VV S A + L E ++
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPER--DVV--SCTAIIAGYAQLGLDEEALEM 241
Query: 410 LVDL-DPGVDSNYVLLANMYAAV 431
L G+ NYV A++ A+
Sbjct: 242 FHRLHSEGMSPNYVTYASLLTAL 264
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/458 (35%), Positives = 267/458 (58%), Gaps = 28/458 (6%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + +S + +SG E F M G P+ T++T+LS C+ CL +
Sbjct: 232 WNAMLSGYAQSGAAQETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGDPCL-----AESI 286
Query: 108 VCKLGLD--RNNVMVGTALLDMYAKFGRMDLATVVFDAMRV-KSSFTWNAMIDGYMRRGD 164
V KL R+N V TALLDM+AK G +++A +F+ + V K+S TWNAMI Y R GD
Sbjct: 287 VRKLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVGD 346
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLN 223
+ A +F++MP R+ +SW +++ G+ + G +A++ F+EM S +PD VT++SV +
Sbjct: 347 LSLARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFS 406
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
AC ++G LG+G W + + K ++ N+LI +Y RCG +E AR FQ M + LVS
Sbjct: 407 ACGHLGRLGLGNWAVSILHENHIKLSISGYNSLIFMYLRCGSMEDARITFQEMATKDLVS 466
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
+N++I G A +G E+++ + M+++G PD +++ G LTACSHAGL+E+G + F+ +K
Sbjct: 467 YNTLISGLAAHGHGTESIKLMSKMKEDGIGPDRITYIGVLTACSHAGLLEEGWKVFESIK 526
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
P ++HY C++D+ R G+LE+A+ ++++MPM+P+ + GSLL A + L
Sbjct: 527 -----VPDVDHYACMIDMLGRVGKLEEAVKLIQSMPMEPHAGIYGSLLNATSIHKQVELG 581
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E L ++P NYVLL+N+YA G+W K+R M+ +G++K
Sbjct: 582 ELAAAKLFKVEPHNSGNYVLLSNIYALAGRWKDVDKVRDKMRKQGVKKTT---------- 631
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
F+ +R H +S+ IY++L L L+ GYV + +
Sbjct: 632 ---FIVENRPHEKSD-IYNLLAHLKVKLRRAGYVIDKI 665
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 166/380 (43%), Gaps = 52/380 (13%)
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
L C +G NV+ T ++ +AK ++ A + FD M + +WNAM+ GY + G +
Sbjct: 187 LFCMMGESEKNVITWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAMLSGYAQSGAAQ 246
Query: 167 SAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
VR+FD+M D +W +L+ G A R++ +Y ++L
Sbjct: 247 ETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGDPCLAESIVRKLDRMNFRSNYFVKTALL 306
Query: 223 NACANVGTLGIGLWIHRYVLKQ--DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+ A G L + + + +Q +K++V N +I Y+R G + AR +F +M +R
Sbjct: 307 DMHAKCGNLEVA----QKIFEQLGVYKNSV-TWNAMISAYARVGDLSLARDLFNKMPERN 361
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
VSWNS+I G+A NG +A++ F M + KPD V+ +AC H G + G
Sbjct: 362 TVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSACGHLGRLGLGNWAV 421
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK------------------ 381
I+ + + + I Y ++ +Y R G +EDA + M K
Sbjct: 422 SILHENH-IKLSISGYNSLIFMYLRCGSMEDARITFQEMATKDLVSYNTLISGLAAHGHG 480
Query: 382 ----------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLD-PGVDSNYVLL 424
P+ + +L AC G L E K + P VD +Y +
Sbjct: 481 TESIKLMSKMKEDGIGPDRITYIGVLTACSHAG---LLEEGWKVFESIKVPDVD-HYACM 536
Query: 425 ANMYAAVGKWDGAGKIRRTM 444
+M VGK + A K+ ++M
Sbjct: 537 IDMLGRVGKLEEAVKLIQSM 556
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 119/244 (48%), Gaps = 19/244 (7%)
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
F+ MQ Y + VL A G+ +H Y+LK + V N ++ +Y++
Sbjct: 91 FKHMQYYNDIKPYTSFYPVLIKSAGKA----GMLLHAYLLKLGHSHDHHVRNAIMGIYAK 146
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
GCIE AR++F M RT WN II G+ G EA F M + + + +++T
Sbjct: 147 YGCIELARKLFDEMPDRTAADWNVIISGYWKCGNEKEATRLFCMMGES--EKNVITWTTM 204
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM-- 380
+T + +E YFD M + R+ + ++ Y+++G ++ + + ++M
Sbjct: 205 VTGHAKMRNLETARMYFDEMPE-----RRVASWNAMLSGYAQSGAAQETVRLFDDMLSSG 259
Query: 381 -KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDG 436
+P+E ++L++C + GD LAE +++ L ++ SNY + L +M+A G +
Sbjct: 260 NEPDETTWVTVLSSCSSLGDPCLAESIVRKLDRMN--FRSNYFVKTALLDMHAKCGNLEV 317
Query: 437 AGKI 440
A KI
Sbjct: 318 AQKI 321
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 262/448 (58%), Gaps = 4/448 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W++ I+R+ +SG EA F++M G PN F LS A + L G IH
Sbjct: 282 ISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASL--RALSAGINIH 339
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V K+G+D++ V +G++L+D+Y K G+ D +VFD + K+ WN+M+ GY G +
Sbjct: 340 GHVTKIGIDKD-VFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRL 398
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E +F+ +P ++ +SW ++ G+++ E+ LE F + +SG P+ T SVL AC
Sbjct: 399 EETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCAC 458
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ +L G+ +H ++K + ++ V L D+Y++CG I ++QVF+RM ++ +SW
Sbjct: 459 ASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWT 518
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+I G A +GF E+L F M++ P+ + L ACSH GL++ GL YF+ M+K
Sbjct: 519 VMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEK 578
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y + P+ +HY C+VDL SR+GRL +A + +P +P +LL+ C+ D +AE
Sbjct: 579 VYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAE 638
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
R K L L + YVLL+N+YA+ G+W IR+ M+ +G++K G S +E+ + +
Sbjct: 639 RTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQV 698
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLK 492
H F + D SH +S IY L+LL ++K
Sbjct: 699 HSFYSEDGSHSQSNEIYGTLQLLRSEMK 726
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 192/373 (51%), Gaps = 40/373 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT++IS R+G EA F R+ G PN +TF +++ C + LG I
Sbjct: 150 VSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGD--FGLGMSIL 207
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
GLV K G + + + V +L+ + + G +DLA VFD M + +W A++D Y+ GD+
Sbjct: 208 GLVVKAGFE-HYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDL 266
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A R+FDEMP R+ ISW+A++ + + GY EEAL+ F +M G +P+ L+A
Sbjct: 267 REARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSAL 326
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ L G+ IH +V K +V + ++LIDLY +CG + R VF + ++ +V WN
Sbjct: 327 ASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWN 386
Query: 286 SIIVGFAVNGFVG-------------------------------EALEYFNSMQKEGFKP 314
S++ G+++NG + + LE FN++ G P
Sbjct: 387 SMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTP 446
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDAL 372
+ +F+ L AC+ ++ G+ ++ KI ++ + + + + D+Y++ G + +
Sbjct: 447 NKSTFSSVLCACASIASLDKGM---NVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSK 503
Query: 373 NVVENMPMKPNEV 385
V E MP K NE+
Sbjct: 504 QVFERMPEK-NEI 515
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 163/317 (51%), Gaps = 33/317 (10%)
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
D ++++V ++ Y ++G + A ++FD M ++ +W+A+I G M+ G +E ++ F
Sbjct: 82 FDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYF 141
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
+ P ++ +SWTA ++GFV+ G EAL+ F + SGV P+ VT SV+ AC +G G
Sbjct: 142 ERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFG 201
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI----- 287
+G+ I V+K F+ + V N+LI L R G I+ AR+VF RM KR +VSW +I
Sbjct: 202 LGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYV 261
Query: 288 --------------------------IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
I ++ +G+ EAL+ F+ M +EGFKP+ F
Sbjct: 262 ETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFAC 321
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+A + + G+ + KI + + ++DLY + G+ +D +V ++ ++
Sbjct: 322 TLSALASLRALSAGINIHGHVTKI-GIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDLILE 379
Query: 382 PNEVVLGSLLAACRTKG 398
N V S++ G
Sbjct: 380 KNVVCWNSMVGGYSING 396
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF--------- 291
++K+ ++ V N +I Y + G + AR +F M +R VSW+++I G
Sbjct: 78 IVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEES 137
Query: 292 -----------------AVNGFVG-----EALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
A++GFV EAL+ F + + G +P+ V+FT + AC
Sbjct: 138 MWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGEL 197
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHY----GCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
G G+ ++ V EHY ++ L R G ++ A V + M K + V
Sbjct: 198 GDFGLGMSILGLV-----VKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRME-KRDVV 251
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
++L A GD+ A R+ + + + + ++ + Y+ G + A K+ M
Sbjct: 252 SWTAILDAYVETGDLREARRIFDEMPERN---EISWSAMIARYSQSGYAEEALKLFSKMV 308
Query: 446 GRGIQKKPGLS 456
G KP +S
Sbjct: 309 QEGF--KPNIS 317
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/461 (35%), Positives = 261/461 (56%), Gaps = 36/461 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + IS + +G EA F M P+ T +T++S CA S + LG
Sbjct: 185 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ--SGSIELG 242
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + G N +V NA+ID Y +
Sbjct: 243 RQVHSWIDDHGFGSNLKIV--------------------------------NALIDLYSK 270
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++E+A +F+ +P +D ISW L+ G+ ++EAL F+EM SG P+ VT++S+
Sbjct: 271 CGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 330
Query: 222 LNACANVGTLGIGLWIHRYVLK--QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACA++G + IG WIH Y+ K + + + +LID+Y++CG IE A QVF + +
Sbjct: 331 LPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 390
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+L SWN++I GFA++G + + F+ M+K G +PD ++F G L+ACSH+G+++ G F
Sbjct: 391 SLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIF 450
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M + Y+++P++EHYGC++DL +G ++A ++ M M+P+ V+ SLL AC+ G+
Sbjct: 451 RSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGN 510
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E + L+ ++P +YVLL+N+YA G+W+ R + +G++K PG SSIE
Sbjct: 511 VELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIE 570
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I S +HEF+ GD+ H + IY MLE + L+ G+VP+T
Sbjct: 571 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 611
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 214/403 (53%), Gaps = 14/403 (3%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + H S A + M G PN TF LL CA S+ G IHG
Sbjct: 59 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK--SKAFKEGQQIHGH 116
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG D + + V T+L+ MY + GR++ A VFD + ++ A+I GY RG IE+
Sbjct: 117 VLKLGCDLD-LYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIEN 175
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +MFDE+PV+D +SW A+++G+ + G ++EALE F++M + V PD T+++V++ACA
Sbjct: 176 AQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 235
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G++ +G +H ++ F N+K+ N LIDLYS+CG +E A +F+ + + ++SWN++
Sbjct: 236 SGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTL 295
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KKI 345
I G+ EAL F M + G P+ V+ L AC+H G I+ G R+ + K++
Sbjct: 296 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG-RWIHVYIDKRL 354
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSLLAACRTKGDII 401
V+ ++D+Y++ G +E A V ++ K N ++ G + R
Sbjct: 355 KGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG-RADASFD 413
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
+ R+ K ++ D D +V L + + G D I R+M
Sbjct: 414 IFSRMRKNGIEPD---DITFVGLLSACSHSGMLDLGRHIFRSM 453
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 162/382 (42%), Gaps = 50/382 (13%)
Query: 103 MIHGLVCKLGLDRNNVMVGTALLD---MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
MIH + K GL N + + L++ + F + A VF+ ++ + WN M G+
Sbjct: 8 MIHAQMIKTGLHNTNYAL-SKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 66
Query: 160 MRRGDIESAVRMFDEMP----VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
D SA++++ M + ++ ++ LL K F+E + + G + D
Sbjct: 67 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 126
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
S+++ G L H+ + +D V LI Y+ G IE A+++F
Sbjct: 127 YVHTSLISMYVQNGRLEDA---HKVFDESPHRDVVSY-TALIKGYASRGYIENAQKMFDE 182
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+ + +VSWN++I G+A G EALE F M K +PD + ++AC+ +G IE G
Sbjct: 183 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 242
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK-------------- 381
+ + + ++ ++DLYS+ G LE A + E +P K
Sbjct: 243 RQVHSWIDD-HGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTH 301
Query: 382 --------------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
PN+V + S+L AC G I + + Y+ GV +
Sbjct: 302 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANAS 361
Query: 422 VL---LANMYAAVGKWDGAGKI 440
L L +MYA G + A ++
Sbjct: 362 SLRTSLIDMYAKCGDIEAAHQV 383
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 110/249 (44%), Gaps = 25/249 (10%)
Query: 237 IHRYVLKQDFKDNVKVCNTLID---LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV 293
IH ++K + + LI+ L + +A VF+ + + L+ WN++ G A+
Sbjct: 9 IHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 68
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE 353
+ AL+ + M G P+ +F L +C+ + ++G + I + ++ ++
Sbjct: 69 SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQ---IHGHVLKLGCDLD 125
Query: 354 HY--GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
Y ++ +Y + GRLEDA V + P + + V +L+ ++G I A+++
Sbjct: 126 LYVHTSLISMYVQNGRLEDAHKVFDESPHR-DVVSYTALIKGYASRGYIENAQKMF---- 180
Query: 412 DLDPGVD-SNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL-----------SSIE 459
D P D ++ + + YA G + A ++ + M ++ SIE
Sbjct: 181 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 240
Query: 460 IGSGIHEFM 468
+G +H ++
Sbjct: 241 LGRQVHSWI 249
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/454 (36%), Positives = 263/454 (57%), Gaps = 9/454 (1%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S V V + + I+ R G ++ F M P+ TF+ LLSGC+
Sbjct: 178 ESFVRDCVSFNTMINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLED--Y 235
Query: 99 FLGAMIHGLVCK-LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT--WNAM 155
+G +HGLV + LG NV++ L+DMYAK GR+ +A V ++ S W ++
Sbjct: 236 RIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSL 295
Query: 156 IDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
+ Y RG+++ A R+FD+M RD +SWTA+++G+ G F+EALE F +++ G++PD
Sbjct: 296 VSAYALRGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDE 355
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK--VCNTLIDLYSRCGCIEFARQVF 273
V +++ L+ACA +G L +G IHR +++ ++ + ++D+Y++CG I+ A VF
Sbjct: 356 VAVVAALSACARLGALELGRRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVF 415
Query: 274 QRMH--KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
++ K+T +NSII G A +G A F M G KPD ++F L+AC H GL
Sbjct: 416 RKTSDDKKTTFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGL 475
Query: 332 IEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLL 391
++ G + F+ M +Y VSP +EHYGC+VDL RAG L++A ++ MP K N V+ +LL
Sbjct: 476 VDFGKKLFESMFTVYGVSPEMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALL 535
Query: 392 AACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQK 451
+AC+ GD+ LA LV+L + YV+L+NM + + D A +R+ + GIQK
Sbjct: 536 SACKVHGDVALARVASYELVELQHDHGAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQK 595
Query: 452 KPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
PG S +E+ +H+F+AGD+SH E++ ML
Sbjct: 596 PPGWSYVEMNRSLHKFLAGDKSHPEAKTTELMLR 629
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 68/333 (20%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ TF LL CA+ G +H V + G ++V V ALL+ Y FG + A
Sbjct: 114 PDSFTFPFLLKACANVLISAPQFGFQVHCHVLRNGFG-SDVFVNNALLNFYCGFGDVVNA 172
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
VFD V+ ++N MI+G+ R+GD+ R+F EM RG
Sbjct: 173 YKVFDESFVRDCVSFNTMINGFARKGDVSGCFRVFGEM-----------------RGV-- 213
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ--DFKDNVKVCNT 255
C R PD T +++L+ C+ + IG +H V ++ F NV + N
Sbjct: 214 ----CVR--------PDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNK 261
Query: 256 LIDLYSRCGC---------------------------------IEFARQVFQRMHKRTLV 282
L+D+Y++CG ++ AR++F +M +R +V
Sbjct: 262 LVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVV 321
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDI 341
SW ++I G++ G EALE F ++ G KPD V+ AL+AC+ G +E G R +
Sbjct: 322 SWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIHRQY 381
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
+ + S +VD+Y++ G ++ AL+V
Sbjct: 382 AGENWTCSINRGFTSAVVDMYAKCGSIDIALDV 414
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 150/328 (45%), Gaps = 41/328 (12%)
Query: 171 MFDEMPVRDAISWTALLNGFVK-RGYFEEALECFREMQISGVEPDYVTIISVLNACANV- 228
+F ++ D W A++ + + + F+ M S V PD T +L ACANV
Sbjct: 71 LFTQITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVL 130
Query: 229 -GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G +H +VL+ F +V V N L++ Y G + A +VF R VS+N++
Sbjct: 131 ISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTM 190
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I GFA G V F M+ +PD +F L+ CS ++ED + I ++++
Sbjct: 191 INGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCS---VLED----YRIGRQVHG 243
Query: 348 VSPRIEHYGC----------IVDLYSRAGRL---EDALNVVENMPMKPNEVVLGSLLAAC 394
+ R GC +VD+Y++ GRL E L+VV+ P K SL++A
Sbjct: 244 LVYR--ELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVK--PGKSVVAAWTSLVSAY 299
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK-- 452
+G++ +A RL + + D ++ + + Y+ G + A ++ ++G G++
Sbjct: 300 ALRGEVKVARRLFDQMGERDV---VSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEV 356
Query: 453 ---------PGLSSIEIGSGIHEFMAGD 471
L ++E+G IH AG+
Sbjct: 357 AVVAALSACARLGALELGRRIHRQYAGE 384
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/462 (35%), Positives = 250/462 (54%), Gaps = 46/462 (9%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV WT+ I+ + +G + EA +G P+ T + +L+ CA
Sbjct: 137 TVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIA---------- 186
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLAT--VVFDAMR----VKSSFTWNAMIDG 158
DLAT V+ A +S F A +D
Sbjct: 187 ------------------------------DLATGETVWRAAEQEGVAQSVFVATAAVDL 216
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y++ G++ A +FD+M +DA++W A++ G+ G+ EAL+ F MQ G++PD +
Sbjct: 217 YVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAV 276
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
L+AC +G L +G R V +F DN + LID+Y++CG A VFQ+M K
Sbjct: 277 AGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRK 336
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ ++ WN++I+G + G A M+K G K + +F G L +C+H GLI+DG RY
Sbjct: 337 KDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRY 396
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M K+Y +SPRIEHYGC+VDL SRAG L++A +V++MPM N V+LG+LL C+
Sbjct: 397 FHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHR 456
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
+ LAE ++K L+ L+P NYV+L+N+Y+ G+W+ A K+R MK +G++K P S +
Sbjct: 457 NTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWV 516
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
E +HEF GD+SH S+ IY L+ L ++K GY P T
Sbjct: 517 EFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTT 558
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/446 (35%), Positives = 252/446 (56%), Gaps = 7/446 (1%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
V V W + +C++ EA L+F +M G + + T+LS C + L
Sbjct: 132 AVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVLSDQLILATVLSACGHI--RHLRT 189
Query: 101 GAMIHG--LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G IH LV + + N + +AL+++YA M++A +++ M K + AM+ G
Sbjct: 190 GKSIHSYMLVSDILI---NAHLSSALINLYASCASMEMAEKLYNGMPRKDLVSSTAMVFG 246
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y R E A +FD MP +D +SW+A+++G+ EAL F +MQ G+ PD VT+
Sbjct: 247 YARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDMQECGIRPDEVTM 306
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+SV++ACAN+G+L WIH ++ + +CN LID++++CG I A +F M +
Sbjct: 307 LSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCGGINLALNIFNEMPQ 366
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +++W S+I FA++G AL F M+ EG +P+ V+F L AC HAGL+ +G
Sbjct: 367 KNVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSL 426
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M + Y + P+ EHYGC+VDL RA +++A+N++E+M ++PN V GSLLAAC G
Sbjct: 427 FSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHLRPNVPVWGSLLAACWMHG 486
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
D+ L K ++ LDP D VLL+ +Y + A ++R MK +G+ K+ GLS +
Sbjct: 487 DLKLGAFAAKKILQLDPNHDGASVLLSKIYMKSDNLNDAQEVRDVMKLQGVSKETGLSWM 546
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSML 484
++ HEF AG + E++ I+ L
Sbjct: 547 DLNEPFHEFTAGGEKYPENDKIFQKL 572
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 166/370 (44%), Gaps = 70/370 (18%)
Query: 95 SQCLFLGAMI---HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT 151
++C+ GA + H L ++G ++ V TAL+ YA G + A VFD M V+ +
Sbjct: 80 ARCVGAGAYVRGAHALAFRVG-SLDDGFVRTALVGAYAACGCVGDARKVFDGMAVRDVVS 138
Query: 152 WNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV 211
W M+D Y + + ++EAL F +M+ SGV
Sbjct: 139 WGVMLDSYCQTRN-------------------------------YKEALLQFAKMKNSGV 167
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI----- 266
D + + +VL+AC ++ L G IH Y+L D N + + LI+LY+ C +
Sbjct: 168 LSDQLILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEK 227
Query: 267 --------------------------EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
E AR +F M ++ +VSW+++I G+A + EA
Sbjct: 228 LYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEA 287
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
L FN MQ+ G +PD V+ ++AC++ G + D ++ K ++ + ++D
Sbjct: 288 LSLFNDMQECGIRPDEVTMLSVISACANLGSL-DKAKWIHAFIKNNGLNKILHICNALID 346
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
++++ G + ALN+ MP K N + S++ A GD A L + + + GV+ N
Sbjct: 347 MFAKCGGINLALNIFNEMPQK-NVITWTSMITAFAMHGDGKSALCLFEQM--RNEGVEPN 403
Query: 421 YVLLANMYAA 430
V N+ A
Sbjct: 404 EVTFLNLLYA 413
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/477 (36%), Positives = 264/477 (55%), Gaps = 25/477 (5%)
Query: 1 MNSSATATILPQ---PFLPHQ-QNPNQNL-------TTTPQISIQTNNSKSTVNPTVQWT 49
++++ T T LPQ FL H + NQ L T+ QI T T +P +
Sbjct: 16 LHNTKTQTHLPQIHAHFLRHGLHHSNQILSHFVSVCTSLHQIPYATTIFNHTHHPNILLF 75
Query: 50 SSISRHCRSGRIAEAALEF---TRMTLHGTNPNHITFITLLSGCA---DFPSQCLFLGAM 103
+SI + S + F +MT H P++ TF LL + D+ LG
Sbjct: 76 NSIIKAHSSFPPFHQSFHFFNLMKMT-HNILPDNFTFPPLLKATSYLRDYD-----LGQC 129
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H V LG R++ V LL++Y+ G+M+ A VFD M + WN MI+G+ + G
Sbjct: 130 LHAHVTALGFYRHSP-VEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKMG 188
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+E +++F M R +SW +++ +R EA FREM G EPD T+++VL
Sbjct: 189 DLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLP 248
Query: 224 ACANVGTLGIGLWIHRYVL-KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
CA +G + G WIH Y K + + V N+L+D Y +CG +E A +VF M K+ +V
Sbjct: 249 VCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVV 308
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN++I G +NG +E F M ++G P +F G L C+HAG ++ G FD M
Sbjct: 309 SWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSM 368
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+++SP++EHYGC+VDL R G +++A +++ NMP+ PN + G+LL+ACRT GD +
Sbjct: 369 TVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDREV 428
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
AE K LV L+PG NYVLL+N+YA KW+ K+R M+G GI+K PG S+++
Sbjct: 429 AEIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIKKNPGQSALQ 485
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 272/462 (58%), Gaps = 15/462 (3%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W ++ RSG + +A F RM N + + T+++G A G++
Sbjct: 163 WNILLAALVRSGNMDKARKLFDRMP----ERNVMAWTTMVAGIARS-------GSVDEAR 211
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
G+ NV+ A++ YA+ R+D A +F M + +WN MI G+++ D+E
Sbjct: 212 ALFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLER 271
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +FD+MP R+ I+WT ++NG+++ E AL+ F M + G+ P+ VT + ++AC+N
Sbjct: 272 AQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSN 331
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ L G +H+ + K F+ + + +TL++LY++CG I AR+VF ++ ++SWN +
Sbjct: 332 LAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGM 391
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I +A +G EA+ + MQ++G+KP+ V++ G L+ACSH+GL+++GLR F+ M K
Sbjct: 392 IAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRS 451
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
++ R EHY C++DL SRAGRL DA ++ + ++P+ V +LL C + G+ + +
Sbjct: 452 IAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAA 511
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
+ L++ +P Y LL N+YA+ GKW A KIR M RG++K+PG S IE+ + +H F
Sbjct: 512 RNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVENKVHVF 571
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVP----ETVAGEL 505
++ D+SH ES+ I S+L+ + +++ VP + + GEL
Sbjct: 572 VSRDKSHSESDLINSLLQDIHDIMRMACTVPRDDMQLIDGEL 613
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 215/471 (45%), Gaps = 63/471 (13%)
Query: 17 HQQNPNQNLTTTPQISIQTNNSKSTVNPT-----VQWTSSISRHCRSGRIAEAALEFTRM 71
H Q+PN+ + + ++++ + T V WT+ ++ + R G + +A F R
Sbjct: 34 HVQDPNRRVAELAAAG-RVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDR- 91
Query: 72 TLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF 131
N +T+ LLSG A G + + NV+ +L+ Y
Sbjct: 92 --PDARRNVVTWTALLSGYAR-------AGRVDEAEALFQRMPERNVVSWNTMLEAYTSA 142
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
GR+ A +FD M V+ + +WN ++ +R G+++ A ++FD MP R+ ++WT ++ G
Sbjct: 143 GRVRDAWTLFDGMPVRDAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIA 202
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
+ G +EA F M E + V+ ++++ A + H +K +D +
Sbjct: 203 RSGSVDEARALFDGMP----ERNVVSWNAMISGYARNHRIDEA---HDLFMKMPTRD-IA 254
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
N +I + + +E A+ +F +M +R +++W +++ G+ + AL+ FN M EG
Sbjct: 255 SWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEG 314
Query: 312 FKPDGVSFTGALTACSH-AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE- 369
+P+ V+F GA+ ACS+ AGL E + I K ++ IE +++LY++ G +
Sbjct: 315 IRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIE--STLMNLYAKCGEIRL 372
Query: 370 ------------------------------DALNVVENMP---MKPNEVVLGSLLAACRT 396
+A+++ E M KPN+V LL+AC
Sbjct: 373 ARKVFDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSH 432
Query: 397 KGDIILAERLMKYLV-DLDPGV-DSNYVLLANMYAAVGKWDGAGKIRRTMK 445
G + R+ +Y+V D V D +Y L ++ + G+ A ++ +K
Sbjct: 433 SGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLK 483
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
D +V+ N + + G + AR++F R R +VSW +++ +A G + +A F
Sbjct: 30 DVSGHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALF 89
Query: 305 NSMQKEGFKPDG----VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
+ +PD V++T L+ + AG +++ F M + VS + +++
Sbjct: 90 D-------RPDARRNVVTWTALLSGYARAGRVDEAEALFQRMPERNVVS-----WNTMLE 137
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
Y+ AGR+ DA + + MP++ + LLAA G++ A +L
Sbjct: 138 AYTSAGRVRDAWTLFDGMPVR-DAGSWNILLAALVRSGNMDKARKL 182
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/451 (37%), Positives = 256/451 (56%), Gaps = 37/451 (8%)
Query: 36 NNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPS 95
+++ + TV W + I+ + +G +A F++M + +T + L CA
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACA---R 208
Query: 96 QCLF-LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNA 154
C+ +G + H L+ G + N M G++L+ MYAK G+
Sbjct: 209 TCMMKVGKLCHALLVTNGFEINCYM-GSSLISMYAKCGQ--------------------- 246
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+E A R+FD MP R+A+ WT++++G+ + G +EA++ FR+MQI+GV+ D
Sbjct: 247 ----------VEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVKVD 296
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
TI +V+++C +G L +G ++H Y ++ V N+LID+YS+CG I+ A +F
Sbjct: 297 DATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDIFC 356
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIE 333
M KR SW II+GFA NG GEAL+ F M++EG P+ ++F G LT+CSH GL+E
Sbjct: 357 GMVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVE 416
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
G R+F M IY ++PRIEHYGC+VDL RA L +A ++ MP+ P+ V+ SLL A
Sbjct: 417 QGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLLFA 476
Query: 394 CRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKP 453
CRT G++ LAE + + + L+P VLL+ +YA +W A K+R + K+P
Sbjct: 477 CRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRKTKQP 536
Query: 454 GLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
G S IE+ +HEF AGD SH E+E IYS L
Sbjct: 537 GCSFIEVDGCVHEFFAGDESHFETEAIYSTL 567
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 139/297 (46%), Gaps = 33/297 (11%)
Query: 87 LSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRV 146
LS A PS + +GA +H L KLGL + ++ T L++MY+ A V D+
Sbjct: 100 LSTAARMPS--VVVGAQLHALSVKLGLSSDTFVLNT-LINMYSSCSYPSTARSVLDSAPK 156
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+S D +SW ++ G++ G +AL+ F +M
Sbjct: 157 GAS-----------------------------DTVSWNTIIAGYIHAGLPNKALQAFSQM 187
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
V D VT+++ L ACA + +G H ++ F+ N + ++LI +Y++CG +
Sbjct: 188 AKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQV 247
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
E AR++F M R V W S+I G+ G EA++ F MQ G K D + + +++C
Sbjct: 248 EDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSC 307
Query: 327 SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPN 383
G ++ G RY I+ + I ++D+YS+ G ++ A ++ M + N
Sbjct: 308 GQMGALDLG-RYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDN 363
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 6/182 (3%)
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
D ++ + L+ A + ++ +G +H +K + V NTLI++YS C AR V
Sbjct: 92 DNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVL 151
Query: 274 QRMHK--RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
K VSWN+II G+ G +AL+ F+ M K D V+ AL AC+ +
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCM 211
Query: 332 IEDG-LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
++ G L + ++ + ++ + ++ +Y++ G++EDA + + MP + N V S+
Sbjct: 212 MKVGKLCHALLVTNGFEINCYMG--SSLISMYAKCGQVEDARRIFDGMPDR-NAVCWTSM 268
Query: 391 LA 392
++
Sbjct: 269 IS 270
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/456 (35%), Positives = 249/456 (54%), Gaps = 34/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV WT+ I+ + +G + EA +G P+ T + +L+ CA I
Sbjct: 592 TVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR-----------I 640
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
L + R G A +S F A +D Y++ G+
Sbjct: 641 ADLATGETVWRAAEQEGVA-----------------------QSVFVATAAVDLYVKCGE 677
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A +FD+M +DA++W A++ G+ G+ EAL+ F MQ G++PD + L+A
Sbjct: 678 MAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSA 737
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C +G L +G R V +F DN + LID+Y++CG A VFQ+M K+ ++ W
Sbjct: 738 CTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVW 797
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I+G + G A M+K G K + +F G L +C+H GLI+DG RYF M K
Sbjct: 798 NAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTK 857
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y +SPRIEHYGC+VDL SRAG L++A +V++MPM N V+LG+LL C+ + LAE
Sbjct: 858 LYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAE 917
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++K L+ L+P NYV+L+N+Y+ G+W+ A K+R MK +G++K P S +E +
Sbjct: 918 HVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKV 977
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF GD+SH S+ IY L+ L ++K GY P T
Sbjct: 978 HEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTT 1013
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/403 (39%), Positives = 252/403 (62%), Gaps = 6/403 (1%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +HG V K L + VG +++ MY FG ++LA VFD M + +WN+MI GY+
Sbjct: 128 GRQVHGQVLKTHL-WFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYL 186
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G+IE A ++F+ M +D ++WT++++ +V+ +AL+ FREM G+ PD I+S
Sbjct: 187 KAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVS 246
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFK-DNVKVCNTLIDLYSRCGCIEFARQVFQRM-HK 278
VL+A A++G + G W+H YV + + + + LID+YS+CG IE A VF+ + H+
Sbjct: 247 VLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHR 306
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R + WNS+I G A++G EAL+ F M++ +P+ ++F G L+ CSH GL+E+G Y
Sbjct: 307 RNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFY 366
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F+ M + Y++ PRI+HYGC++DL+ RAGRLEDAL V++NMP + + + ++L+A G
Sbjct: 367 FESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHG 426
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
I + + ++L P S+YVLL+N+YA G+WD KIR M+ RG++K G SS+
Sbjct: 427 HIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSM 486
Query: 459 EIGSGIHEFMAGDR--SHIESEHIYSMLELLSFDLKLCGYVPE 499
+ +HEF+ G S + + + E++S LKL GY P+
Sbjct: 487 LVNGKVHEFLLGKELDSSYSGQVLAKIAEVVS-RLKLQGYEPD 528
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 155/379 (40%), Gaps = 78/379 (20%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG--TALLDMY 128
MT TNP +++L C S C IH + K L + V A +
Sbjct: 1 MTAISTNP----VVSVLDKC---KSLCEL--RQIHAQMIKTNLLNHQFTVSRLIAFCSLS 51
Query: 129 AKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLN 188
G +D A+ VF ++ +SF + A+I G+ + PV I + +L+
Sbjct: 52 GVSGGLDYASSVFSRIQHPNSFIFFALIKGFSDTSN-----------PVESLILYARMLS 100
Query: 189 GFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD 248
C SGVE +I SVL AC + G +H VLK
Sbjct: 101 -------------CLN--YSSGVE---FSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWF 142
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG---------- 298
+ V N+++ +Y G IE AR+VF RM R +VSWNS+I G+ G +
Sbjct: 143 DPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELAKKVFETMS 202
Query: 299 ---------------------EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-- 335
+AL+ F M G +PDG + L+A + G +E+G
Sbjct: 203 DKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKW 262
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
L + M KI S I ++D+YS+ G +E+A +V ++ + N S+++
Sbjct: 263 LHAYVSMNKIELSSGFIG--SALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLA 320
Query: 396 TKGDIILAERLMKYLVDLD 414
G LA + V+++
Sbjct: 321 IHG---LAREALDIFVEME 336
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 241/390 (61%), Gaps = 4/390 (1%)
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
G+ R + + +++ YA G + A +F+ + + TW +M+ G+ R GD+ESA R+
Sbjct: 71 GMPRRDTVSFNSMIHGYAVSGDVGSAQRLFERVLAPTPVTWTSMVAGFCRAGDVESARRV 130
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTL 231
F+EMP RD +SW A+++G V EAL FR M G P+ T++SVL+AC G L
Sbjct: 131 FEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGAL 190
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
G W+H +V K+ + + + L+D+Y++CG +E A +VF + R +WN++I G
Sbjct: 191 ETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGL 250
Query: 292 AVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
A+NG+ +AL+ F M+ G PD V+F G L ACSHAG ++ G +F + + Y V
Sbjct: 251 AMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVEL 310
Query: 351 RIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
+EHY C+VDL +R+G L++A ++ MPMKP+ VV +LL CR ++ +AE ++
Sbjct: 311 ILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKNVKMAENVIS-- 368
Query: 411 VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAG 470
+++ ++VLL+N+YAAVG+W+G +RRTM+ +GI+K PG SS+E+ IHEF++G
Sbjct: 369 -EMEATCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGIEKIPGCSSVEMDGSIHEFISG 427
Query: 471 DRSHIESEHIYSMLELLSFDLKLCGYVPET 500
D+SH + I++ L + ++ GYV ET
Sbjct: 428 DKSHPSYDDIHAKLIEIGGRMQQHGYVTET 457
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 133/301 (44%), Gaps = 71/301 (23%)
Query: 44 PT-VQWTSSISRHCRSGRI-------------------------------AEAALEFTRM 71
PT V WTS ++ CR+G + EA F M
Sbjct: 106 PTPVTWTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWM 165
Query: 72 TLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF 131
G PN T +++LS C + L G +H V K L R + +GTAL+DMYAK
Sbjct: 166 MEEGFVPNRGTVVSVLSACTG--AGALETGKWVHVFVEKKRL-RWDEFLGTALVDMYAKC 222
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
G ++LA VF +R +++ TWNAMI+G
Sbjct: 223 GAVELALEVFTGLRARNTCTWNAMING-------------------------------LA 251
Query: 192 KRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
GY +AL+ FR+M+++G V PD VT + VL AC++ G + G H Y + Q + +
Sbjct: 252 MNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGK-EHFYTIPQKYGVEL 310
Query: 251 KVCN--TLIDLYSRCGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
+ + ++DL +R G ++ A ++ M K +V W +++ G ++ V A + M
Sbjct: 311 ILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKNVKMAENVISEM 370
Query: 308 Q 308
+
Sbjct: 371 E 371
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/432 (37%), Positives = 257/432 (59%), Gaps = 4/432 (0%)
Query: 63 EAALEFTR-MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG 121
E ALE R M G P+ + T++S C L + +H + K G++ + V
Sbjct: 174 EKALELFRTMREVGLTPDMVAVSTVVSACGLLGD--LGVAKAMHCFIEKSGIEVD-AFVS 230
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
+ L+ Y + G +D A F +K+ WN MI + ++E ++F MP RD +
Sbjct: 231 STLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVV 290
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
SW +++ GF + G ++EAL F EM+ SGV P+ +T++S L+ACA+ G L G WIH YV
Sbjct: 291 SWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYV 350
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
K D + + ++LID+YS+CG I+ A Q+F+ +R L +W SI+ G A++G +AL
Sbjct: 351 DKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKAL 410
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
YF+ M++ +PD V+ G L+AC+HAGL++ G YF M+K++ + P++EHYG +VDL
Sbjct: 411 HYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDL 470
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
R G L++A +++ MPM+ NE++ G+ L+ACR ++ L E + L+ L P
Sbjct: 471 LGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLXPRDPWAR 530
Query: 422 VLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIY 481
V+L+NMYA KWD + +R+ +K +G++K PG SSIE+ +H F+ GD SH I
Sbjct: 531 VMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEIN 590
Query: 482 SMLELLSFDLKL 493
SM+E + ++L
Sbjct: 591 SMVEKIEKLMRL 602
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 152/363 (41%), Gaps = 68/363 (18%)
Query: 48 WTSSISRHCRSGRIAE--AALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
W + I + +G I L + + G PN TF+ LL A Q + G +H
Sbjct: 57 WNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLK--ALVSGQEVKEGEEVH 114
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + G + + G ALL Y G + VFD MR W
Sbjct: 115 ASVVRTGFACSEFVSG-ALLGFYVACGLVGKGRQVFDEMRQPGLVLW------------- 160
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
T ++ +V + E+ALE FR M+ G+ PD V + +V++AC
Sbjct: 161 ------------------TLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSAC 202
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA---------------- 269
+G LG+ +H ++ K + + V +TLI Y CG +++A
Sbjct: 203 GLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWN 262
Query: 270 ---------------RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
+Q+FQ M R +VSWNS+I GFA G EAL +F+ M+ G P
Sbjct: 263 TMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSP 322
Query: 315 DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
+ ++ L+AC+ G ++ G + K ++ ++D+YS+ G ++ A+ +
Sbjct: 323 NALTLLSTLSACASHGALDTGAWIHAYVDK-NDMNRDGSLDSSLIDMYSKCGDIDKAVQI 381
Query: 375 VEN 377
E
Sbjct: 382 FEE 384
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 40/261 (15%)
Query: 17 HQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT 76
HQ + NL Q+ Q+ + V+ W S I R G+ EA F M G
Sbjct: 266 HQSVEHNNLELGKQL-FQSMPDRDVVS----WNSMIGGFARIGQYQEALTWFHEMEFSGV 320
Query: 77 NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
+PN +T ++ LS CA + L GA IH V K ++R+ + ++L+DMY+K G +D
Sbjct: 321 SPNALTLLSTLSACASHGA--LDTGAWIHAYVDKNDMNRDGSL-DSSLIDMYSKCGDIDK 377
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A +F+ + FTW +++ G G RG
Sbjct: 378 AVQIFEESTRRDLFTWTSIVCGLAMHG-----------------------------RG-- 406
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNT 255
E+AL F +M+ + V+PD VT++ VL+ACA+ G L G W + + K V+
Sbjct: 407 EKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGX 466
Query: 256 LIDLYSRCGCIEFARQVFQRM 276
++DL R GC++ A + M
Sbjct: 467 MVDLLGRMGCLKEAYDLIMGM 487
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 105/243 (43%), Gaps = 22/243 (9%)
Query: 183 WTALLNGFVKRGYFEEALECFREMQ--ISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
W ++ V+ G MQ +G+ P+ T + +L A + + G +H
Sbjct: 57 WNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHAS 116
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
V++ F + V L+ Y CG + RQVF M + LV W II + F +A
Sbjct: 117 VVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKA 176
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
LE F +M++ G PD V+ + ++AC GL+ D + K ++ IE G VD
Sbjct: 177 LELFRTMREVGLTPDMVAVSTVVSAC---GLLGD----LGVAKAMHCF---IEKSGIEVD 226
Query: 361 ---------LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
Y G L+ A + PMK N VV +++ ++ L ++L + +
Sbjct: 227 AFVSSTLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELGKQLFQSMP 285
Query: 412 DLD 414
D D
Sbjct: 286 DRD 288
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/431 (37%), Positives = 252/431 (58%), Gaps = 6/431 (1%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
M +GT P++ +F +L CA L G IH KLG+ + V V AL+ ++
Sbjct: 1 MLRNGTLPDNYSFPFVLKACARL--SLLHKGREIHSSTLKLGVHLD-VFVQNALISAFSS 57
Query: 131 FGRMDLATVVFDAMR--VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLN 188
G ++ A VFD + V+ +WN+MI GY++ E A+++FD +P R+ + WT+++
Sbjct: 58 CGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIA 117
Query: 189 GFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD 248
G+ + F+EA+E FREMQI G D TI VL+AC + G L G WIH Y + +
Sbjct: 118 GYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEM 177
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
++ N LI +YS+CG I+ A ++F + + + SW+++I G A+NG +AL F+ M+
Sbjct: 178 DLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQME 237
Query: 309 K-EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+P+ ++F G L AC+H G ++ GL YF+ M +IY ++P IEHYGC+VDL RA
Sbjct: 238 MISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANL 297
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
L +A + +P++P+ V+ SLL ACR G+I LAE K + +L+P VLL+N+
Sbjct: 298 LVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNV 357
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
YA+ +W ++R+ M + I+K+PG S +EI +HE DRSH E IY + +
Sbjct: 358 YASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISI 417
Query: 488 SFDLKLCGYVP 498
+ L+ G+ P
Sbjct: 418 NKALQSKGFDP 428
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 155/416 (37%), Positives = 241/416 (57%), Gaps = 5/416 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W + I + R+ EA + + M G N I + L+S C + + G +
Sbjct: 498 VISWGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNA--IGDGWQL 555
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG+V K G D N + T ++ YA G MDLA + F+ +WNA++ G+++
Sbjct: 556 HGMVVKKGFDCYN-FIQTTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRM 614
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ A ++FD+MP RD SW+ +++G+ + ALE F +M SG++P+ VT++SV +A
Sbjct: 615 VDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSA 674
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT--LV 282
A +GTL G W H Y+ + N + LID+Y++CG I A Q F ++ +T +
Sbjct: 675 IATLGTLKEGRWAHEYICNESIPLNDNLRAALIDMYAKCGSINSALQFFNQIRDKTFSVS 734
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
WN+II G A +G L+ F+ MQ+ KP+ ++F G L+AC HAGL+E G R F IM
Sbjct: 735 PWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSACCHAGLVEPGRRIFRIM 794
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
K Y V P I+HYGC+VDL RAG LE+A ++ +MPMK + V+ G+LLAACRT GD+ +
Sbjct: 795 KSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIRSMPMKADIVIWGTLLAACRTHGDVNI 854
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
ER + L L P VLL+N+YA G+W+ +RR ++ + +++ PG S +
Sbjct: 855 GERAAESLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRAIQNQRMERMPGCSGV 910
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 209/472 (44%), Gaps = 81/472 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V +T+ I ++ EA F M G PN +T + ++ C+ F + MIH
Sbjct: 367 VSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSHFGE--ILNCRMIH 424
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ KL ++ V+V T L+ Y + A +FD M + +WN M++GY + G +
Sbjct: 425 AIAIKLFVE-GLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLV 483
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A +F+ +P +D ISW +++G++ EAL +R M SG+ + + ++++++AC
Sbjct: 484 DMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSAC 543
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG-----CIEF------------ 268
+ +G G +H V+K+ F + T+I Y+ CG C++F
Sbjct: 544 GRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHLESWN 603
Query: 269 --------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
AR++F M +R + SW+++I G+A ALE F+ M G KP
Sbjct: 604 ALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVASGIKP 663
Query: 315 DGVSFTGALTACSHAGLIEDG-----------------------------------LRYF 339
+ V+ +A + G +++G L++F
Sbjct: 664 NEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALIDMYAKCGSINSALQFF 723
Query: 340 D-IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACR 395
+ I K + VSP + I+ + G L+V +M +KPN + +L+AC
Sbjct: 724 NQIRDKTFSVSP----WNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSACC 779
Query: 396 TKGDIILAE---RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
G + R+MK +++P + +Y + ++ G + A ++ R+M
Sbjct: 780 HAGLVEPGRRIFRIMKSAYNVEPDI-KHYGCMVDLLGRAGLLEEAEEMIRSM 830
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 119/204 (58%), Gaps = 1/204 (0%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +H LV KLGL +N + +L++MYAK G + A ++FDA + + N M+ GY
Sbjct: 288 GRQLHSLVLKLGL-HSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYA 346
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G +++A ++FD MP + +S+T ++ G V+ F EALE F++M+ GV P+ +T+++
Sbjct: 347 KAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVN 406
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
V+ AC++ G + IH +K + V V L+ Y C + AR++F RM +
Sbjct: 407 VIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVN 466
Query: 281 LVSWNSIIVGFAVNGFVGEALEYF 304
LVSWN ++ G+A G V A E F
Sbjct: 467 LVSWNVMLNGYAKAGLVDMARELF 490
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 49/224 (21%)
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
CN ++ Y++ G ++ AR++F M + VS+ ++I+G N EALE F M+ +G
Sbjct: 338 CNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGV 397
Query: 313 KPDGVSFTGALTACSHAG--------------LIEDGL---------------------R 337
P+ ++ + ACSH G L +GL R
Sbjct: 398 VPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARR 457
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
FD M ++ VS + +++ Y++AG ++ A + E +P K + + G+++
Sbjct: 458 LFDRMPEVNLVS-----WNVMLNGYAKAGLVDMARELFERVPDK-DVISWGTMI-----D 506
Query: 398 GDII---LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAG 438
G I+ L E L+ Y L G+ N +L+ N+ +A G+ + G
Sbjct: 507 GYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIG 550
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/382 (38%), Positives = 236/382 (61%), Gaps = 1/382 (0%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
N + +L +A+FG++ A +FD M +++ WNAMI Y++ ++ A+ +F EMP
Sbjct: 119 NTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMP 178
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
+++ISWT ++NG+V+ G +EA + +M +PD T L++CA++ L +G
Sbjct: 179 EKNSISWTTVINGYVRMGKLDEARQLLNQMPYRN-KPDQSTFACGLSSCAHLAALQVGKQ 237
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H+ V+K + ++ V N LI +Y++CG I A +F+ + +VSWNS+I +A+NG
Sbjct: 238 LHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGN 297
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG 356
EAL+ F+ M+ EG PD V+F G L+ACSH GLI+ GL+ F M + Y + P EHY
Sbjct: 298 GREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYA 357
Query: 357 CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPG 416
C+VDL RAGRLE+A +V M + N + G+LL ACR G++ LA+ + L++ +P
Sbjct: 358 CMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPH 417
Query: 417 VDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIE 476
SNYVLL+NM A G+WD ++RR MK +G +K+PG S IE+ + +H F++ D +H
Sbjct: 418 KTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPR 477
Query: 477 SEHIYSMLELLSFDLKLCGYVP 498
+ + +L L+ ++ G +P
Sbjct: 478 AVELCHILRSLTAHMRNTGDMP 499
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 167/365 (45%), Gaps = 46/365 (12%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
N + A++ YAK + D A +FDAM K +WN+M+ GY R G++ ++ F+EM
Sbjct: 26 NPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMA 85
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
RD +SW +++GFV+ G + E F ++ P+ V+ +++L A G +
Sbjct: 86 ERDVVSWNLMVDGFVEVGDLNSSWEFFEKIP----NPNTVSWVTMLCGFARFGKIAEA-- 139
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
R + Q NV N +I Y + ++ A +F M ++ +SW ++I G+ G
Sbjct: 140 --RRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGK 197
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKKIYRVS------ 349
+ EA + N M KPD +F L++C+H ++ G + +MK Y
Sbjct: 198 LDEARQLLNQMPYRN-KPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNA 256
Query: 350 ------------------PRIEHYGCI-----VDLYSRAGRLEDALNVVENMPMK---PN 383
I+H+ + + Y+ G +AL + M ++ P+
Sbjct: 257 LITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPD 316
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLV---DLDPGVDSNYVLLANMYAAVGKWDGAGKI 440
EV +L+AC G I +L K +V +++P + +Y + ++ G+ + A ++
Sbjct: 317 EVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEP-LAEHYACMVDLLGRAGRLEEAFQL 375
Query: 441 RRTMK 445
R MK
Sbjct: 376 VRGMK 380
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 107/233 (45%), Gaps = 23/233 (9%)
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
+K N CN ++ Y++ + AR++F M + LVSWNS++ G+ NG + L++F
Sbjct: 23 YKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFE 82
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
M + D VS+ + G + +F+ + +P + ++ ++R
Sbjct: 83 EMAER----DVVSWNLMVDGFVEVGDLNSSWEFFEKIP-----NPNTVSWVTMLCGFARF 133
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLA 425
G++ +A + + MP++ N V +++AA + + + +++ ++ +
Sbjct: 134 GKIAEARRLFDQMPIR-NVVAWNAMIAAYVQNCHV---DEAISLFMEMPEKNSISWTTVI 189
Query: 426 NMYAAVGKWDGAGKIRRTMKGR----------GIQKKPGLSSIEIGSGIHEFM 468
N Y +GK D A ++ M R G+ L+++++G +H+ +
Sbjct: 190 NGYVRMGKLDEARQLLNQMPYRNKPDQSTFACGLSSCAHLAALQVGKQLHQLV 242
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I+ + +G EA F +M + G P+ +TF+ +LS C+ +G +
Sbjct: 282 VVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSH-------VGLID 334
Query: 105 HGL-VCKLGLDRNNVMV----GTALLDMYAKFGRMDLATVVFDAMRVKSSF-TWNAMIDG 158
GL + K + N+ ++D+ + GR++ A + M++ ++ W A++
Sbjct: 335 QGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGA 394
Query: 159 YMRRGDIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
G++E +A ++ + P + + ++ L N + G ++E R M+ G E
Sbjct: 395 CRIHGNLELAKFAAEKLLEFEPHKTS-NYVLLSNMQAEAGRWDEVARVRRLMKEKGAE 451
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 254/455 (55%), Gaps = 11/455 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + +S + R G +AEA F + T+ ++SG A G +
Sbjct: 294 VSWNTMVSGYARRGDMAEARRLFDVAPIRDV----FTWTAIVSGYAQN-------GMLEE 342
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ N + A++ Y + M+ A +FDAM ++ +WN M+ GY + G +
Sbjct: 343 AKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGML 402
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A +F MP +DA+SW A+L + + G+ EE L+ F+EM G + VL+ C
Sbjct: 403 DEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTC 462
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ L G+ +H ++K + V N L+ +Y +CG +E A F+ M +R +VSWN
Sbjct: 463 ADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWN 522
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G+A +GF EALE F++M+K KPD ++ G L ACSH+GL+E G+ YF M +
Sbjct: 523 TMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRD 582
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ V+ + EHY C++DL RAGRL++A+N++++MP +P+ + G+LL A R + L
Sbjct: 583 FGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRN 642
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ + +L+P YVLL+N+YA+ GKW K+R M RG++K PG S IE+ + +H
Sbjct: 643 AAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVH 702
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F GD H E E IY+ LE L +K GYV T
Sbjct: 703 TFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSAT 737
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 135/288 (46%), Gaps = 22/288 (7%)
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
C G V+ + + + GR+ A +F AM +S+ T+N M+ GY G +
Sbjct: 97 ACITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQ 156
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A+ F +P D+ S+ LL+ + F EM + D V+ ++++ AN
Sbjct: 157 ALSFFRSIPRPDSFSYNTLLHALGVSSSLADVRALFDEMPVK----DSVSYNVMISSHAN 212
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G + L H + L + KD V N ++ Y R G I+ AR++F + +SWN++
Sbjct: 213 HGL--VSLARHYFDLAPE-KDAVS-WNGMLAAYVRNGRIQEARELFDSRTEWDAISWNAL 268
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI--MKKI 345
+ G+ + EA + FN M + D VS+ ++ + G + + R FD+ ++ +
Sbjct: 269 MAGYVQRSQIEEAQKMFNKMPQR----DVVSWNTMVSGYARRGDMAEARRLFDVAPIRDV 324
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
+ + IV Y++ G LE+A V + MP K N V +++AA
Sbjct: 325 FT-------WTAIVSGYAQNGMLEEAKRVFDAMPDK-NAVSWNAMMAA 364
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/416 (36%), Positives = 247/416 (59%), Gaps = 5/416 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + + R GR + A +M G P+ +T +T ++ C+ ++ L LG IH
Sbjct: 116 VLWNMMVRCYIRCGRYSAAVALSEQMERSGVTPDRVTLVTAVTACSR--ARDLSLGRRIH 173
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + N+ V ALLDMY K ++ A +F+ M ++ +W ++ GY G +
Sbjct: 174 --VYMDNVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQL 231
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A +F++ +D I WTA++N V+ G FEEAL FR+MQ+ VEPD T++++L C
Sbjct: 232 DKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCC 291
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN+G L G WIH+Y ++ K + + LID+YS+CG IE + +VF RM R +W
Sbjct: 292 ANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWT 351
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+II G A NG G ALE F MQ+ KPDGV+F G L+AC H GL+++G + F M+++
Sbjct: 352 AIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREV 411
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL-GSLLAACRTKGDIILAE 404
Y++ PR+EHY C+V+L RAG L++A ++ ++P+ + + L G+LL AC+ G++ ++E
Sbjct: 412 YQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSE 471
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
RL K + + D + +L++N+YA +W+ ++R M ++K G S IE+
Sbjct: 472 RLTKRICEQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKTAGCSLIEV 527
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 46/276 (16%)
Query: 143 AMRVKSSFTWNA-----MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
A +K+ F W+A +++ Y G ++ A ++FDEMP R + W ++ +++ G +
Sbjct: 73 AAAIKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGRYS 132
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
A+ +M+ SGV PD VT+++ + AC+ L +G IH Y + F N+ V N L+
Sbjct: 133 AAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVY-MDNVFGFNLPVANALL 191
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
D+Y++ C+E A ++F++M R ++SW ++ G+ + G + +A FN +++ D +
Sbjct: 192 DMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEK----DLI 247
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR----------------------IEHY 355
+T + AC G E+ L F M ++ RV P I Y
Sbjct: 248 LWTAMINACVQHGCFEEALTLFRDM-QMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQY 306
Query: 356 G-------------CIVDLYSRAGRLEDALNVVENM 378
++D+YS+ G +E +L V M
Sbjct: 307 AEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRM 342
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
+A R MP+ + L+ +RG F + + +++ G+ D T VL A
Sbjct: 4 AAARRGHGMPLWEC---NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRA-- 58
Query: 227 NVGTLGI---GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
VG L + G H +K F+ + ++L+++Y+ G ++ AR+VF M R LV
Sbjct: 59 -VGVLKLSVEGRKAHAAAIKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVL 117
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN ++ + G A+ M++ G PD V+ A+TACS A + G R M
Sbjct: 118 WNMMVRCYIRCGRYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMD 177
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
++ + + + ++D+Y++ LE+A+ + E MP +
Sbjct: 178 NVFGFNLPVAN--ALLDMYTKNDCLEEAVKLFEQMPAR 213
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 253/443 (57%), Gaps = 34/443 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV + + +S + + + +EA L F +M G N +T + L+ C P L LG+ +
Sbjct: 117 TVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVS-PIN-LELGSSL 174
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H K G D D++ V N I YM+ G
Sbjct: 175 HCSTLKYGFDS-------------------DVSVV-------------NCFITMYMKCGS 202
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A ++FDEMPV+ ISW A+++G+ + G LE +R M ++GV PD VT++ VL++
Sbjct: 203 VNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSS 262
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CAN+G +G + + F N + N LI++Y+RCG + A+ VF M +RTLVSW
Sbjct: 263 CANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSW 322
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+II G+ ++G A++ F M + G +PDG +F L+ACSHAGL + GL YF +MK+
Sbjct: 323 TAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKR 382
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y++ P EHY C+VDL RAGRL++A ++E+MP+KP+ V G+LL AC+ ++ LAE
Sbjct: 383 NYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAE 442
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ +++L+P YVLL+N+Y+ G +IR MK + ++K PG S +E+ +
Sbjct: 443 LAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRV 502
Query: 465 HEFMAGDRSHIESEHIYSMLELL 487
H F+ GDR+H++S+ IY +LE L
Sbjct: 503 HPFIVGDRNHLQSDEIYRVLEEL 525
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 3/201 (1%)
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
W L KR F +AL + +M G P+ T L +CA + +G H +
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR-MHKRTL-VSWNSIIVGFAVNGFVGEA 300
K V LI +Y + ++ AR+VF+ H R L V +N+++ G+ N EA
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
+ F M +EG + V+ G + AC +E G K Y + C +
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLK-YGFDSDVSVVNCFIT 195
Query: 361 LYSRAGRLEDALNVVENMPMK 381
+Y + G + A + + MP+K
Sbjct: 196 MYMKCGSVNYAQKLFDEMPVK 216
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 163/452 (36%), Positives = 249/452 (55%), Gaps = 35/452 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTR-MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
WT+ I+ + + G E AL+ R M L PNH TF + L CA+ + L +G +
Sbjct: 343 WTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAA--LRIGEQVFT 400
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
KLG N + N++I Y R G I+
Sbjct: 401 HAVKLGFSSVNCVA--------------------------------NSLISMYARSGRID 428
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A + FD + ++ IS+ +++ + K EEALE F E++ G+ T S+L+ A
Sbjct: 429 DARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAA 488
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
++GT+G G IH V+K K N VCN LI +YSRCG IE A QVF+ M R ++SW S
Sbjct: 489 SIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTS 548
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
II GFA +GF +ALE F+ M +EG +P+ V++ L+ACSH GL+ +G ++F M +
Sbjct: 549 IITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEH 608
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
V PR+EHY C+VD+ R+G L +A+ + +MP K + +V + L ACR G++ L +
Sbjct: 609 GVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHA 668
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHE 466
K +++ +P + Y+LL+N+YA+ KWD IR+ MK + + K+ G S +E+ + +H+
Sbjct: 669 AKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHK 728
Query: 467 FMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
F GD SH ++ IY L+ LS +K GYVP
Sbjct: 729 FYVGDTSHPKAAEIYDELQNLSVKIKKLGYVP 760
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 184/380 (48%), Gaps = 40/380 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT I+R + G EA F M L G P+ T ++S CA+ + L LG +H
Sbjct: 237 VTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANM--ELLLLGQQLH 294
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ GL + VG L++MYAK +DG M
Sbjct: 295 SQAIRHGLTLDRC-VGCCLINMYAK-----------------------CSVDGSMC---- 326
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRG-YFEEALECFREMQISGVEPDYVTIISVLNA 224
+A ++FD++ + SWTA++ G+V++G Y EEAL+ FR M ++ V P++ T S L A
Sbjct: 327 -AARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKA 385
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CAN+ L IG + + +K F V N+LI +Y+R G I+ AR+ F + ++ L+S+
Sbjct: 386 CANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISY 445
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I +A N EALE FN ++ +G +F L+ + G I G + I +
Sbjct: 446 NTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQ---IHAR 502
Query: 345 IYRVSPRIEHYGC--IVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+ + ++ C ++ +YSR G +E A V E+M + N + S++ G
Sbjct: 503 VIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDR-NVISWTSIITGFAKHGFATQ 561
Query: 403 AERLMKYLVDLDPGVDSNYV 422
A L + L+ GV N V
Sbjct: 562 ALELFHKM--LEEGVRPNLV 579
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 208/470 (44%), Gaps = 93/470 (19%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC--ADFPSQCLFLGAM 103
+ W++ +S + A L F M +G PN F C A+F S +G
Sbjct: 134 ISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVS----VGDS 189
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
I G V K G +++V VG L+DM+ K RG
Sbjct: 190 IFGFVVKTGYLQSDVCVGCGLIDMFVK------------------------------GRG 219
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+ SA ++F++MP R+A++WT ++ ++ GY EA++ F EM +SG EPD T+ V++
Sbjct: 220 DLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVIS 279
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC---GCIEFARQVFQRMHKRT 280
ACAN+ L +G +H ++ + V LI++Y++C G + AR++F ++
Sbjct: 280 ACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHN 339
Query: 281 LVSWNSIIVGFAVN-GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH----------- 328
+ SW ++I G+ G+ EAL+ F M P+ +F+ L AC++
Sbjct: 340 VFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF 399
Query: 329 ------------------------AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
+G I+D + FDI+ + +S Y ++D Y++
Sbjct: 400 THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLIS-----YNTVIDAYAK 454
Query: 365 AGRLEDAL---NVVENMPMKPNEVVLGSLLAACRTKGDIILAE----RLMKYLVDLDPGV 417
E+AL N +E+ M + SLL+ + G I E R++K + L+ V
Sbjct: 455 NLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSV 514
Query: 418 DSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
+ L +MY+ G + A ++ M+ R + +SI G H F
Sbjct: 515 CN---ALISMYSRCGNIESAFQVFEDMEDRNV---ISWTSIITGFAKHGF 558
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 87/192 (45%), Gaps = 4/192 (2%)
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
+ G +A+ M G PD T L C + IG +H + + D + +
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
N+LI LYS+CG E A +FQ M R L+SW++++ FA N AL F M +
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC-IVDLYSRA-GR 367
G+ P+ F A ACS A + G F + K + + GC ++D++ + G
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDV-CVGCGLIDMFVKGRGD 220
Query: 368 LEDALNVVENMP 379
L A V E MP
Sbjct: 221 LVSAFKVFEKMP 232
>gi|413937828|gb|AFW72379.1| hypothetical protein ZEAMMB73_412000 [Zea mays]
Length = 471
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/430 (38%), Positives = 252/430 (58%), Gaps = 8/430 (1%)
Query: 68 FTRMTLHG-TNPNHITF-ITLLSGCADFPSQCLFLGAMIHGLVCKLGL-DRNNVMVGTAL 124
F RM HG +PN + + L + CA + + IH CK G ++ T+L
Sbjct: 46 FLRMLRHGRPSPNQFVYPLVLRAACA----VDVRIVRSIHSHACKSGFCGYEYDVIRTSL 101
Query: 125 LDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWT 184
LD Y++ M A +FD + +S +W A++ GY R G I A+ +F+ M RD +W
Sbjct: 102 LDCYSRHAMMADARKLFDGLTERSVVSWTALVSGYARAGKIGDAIMLFERMTERDVAAWN 161
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
A++ G + F EA+ F M +G+ P+ TI VL+AC ++G L IG IH +
Sbjct: 162 AIITGCSQNRLFAEAVGIFGRMVGTGLRPNATTISCVLSACGHLGMLKIGKLIHCCAWRT 221
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
V N LID+Y +CG +E A +F + R+L +WNS+I A++G A+ F
Sbjct: 222 CVGFGSSVLNGLIDMYGKCGNLEGATWIFYEVSDRSLTAWNSLINCLALHGHSKCAISVF 281
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
N M+ EG +PD ++F G L AC+H G +++G++YF++M+ + + P IEHYGCI++L R
Sbjct: 282 NEMRGEGVEPDVITFVGLLNACTHGGFVDEGIKYFELMQHEHGIEPEIEHYGCIINLLGR 341
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLL 424
AGR +DALNV+ NM ++ +EV+ GSLL ACR ++ LAE ++ L++LDP + V+L
Sbjct: 342 AGRFQDALNVISNMRIESDEVIWGSLLNACRVHRNVELAELAIRKLLELDPNNANYVVML 401
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKK-PGLSSIEIGSGIHEFMAGDRSHIESEHIYSM 483
AN+Y+ G W+ K R+ M+ I KK PG S IE+ IH F +GD +H ESE+IY
Sbjct: 402 ANVYSEGGLWEEVRKARKFMEEENIGKKLPGCSWIEVDRKIHRFYSGDDAHSESENIYDT 461
Query: 484 LELLSFDLKL 493
LE L+ ++L
Sbjct: 462 LEDLAASMEL 471
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 15/255 (5%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T V WT+ +S + R+G+I +A + F RM T + + +++GC+ LF
Sbjct: 122 TERSVVSWTALVSGYARAGKIGDAIMLFERM----TERDVAAWNAIITGCS---QNRLFA 174
Query: 101 GAM-IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVF-DAMRVKSSF---TWNAM 155
A+ I G + GL R N + +L G + + ++ A R F N +
Sbjct: 175 EAVGIFGRMVGTGL-RPNATTISCVLSACGHLGMLKIGKLIHCCAWRTCVGFGSSVLNGL 233
Query: 156 IDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
ID Y + G++E A +F E+ R +W +L+N G+ + A+ F EM+ GVEPD
Sbjct: 234 IDMYGKCGNLEGATWIFYEVSDRSLTAWNSLINCLALHGHSKCAISVFNEMRGEGVEPDV 293
Query: 216 VTIISVLNACANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+T + +LNAC + G + G+ + + + ++ +I+L R G + A V
Sbjct: 294 ITFVGLLNACTHGGFVDEGIKYFELMQHEHGIEPEIEHYGCIINLLGRAGRFQDALNVIS 353
Query: 275 RMH-KRTLVSWNSII 288
M + V W S++
Sbjct: 354 NMRIESDEVIWGSLL 368
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/456 (35%), Positives = 249/456 (54%), Gaps = 34/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV WT+ I+ + +G + EA +G P+ T + +L+ CA I
Sbjct: 616 TVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR-----------I 664
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
L + R G A +S F A +D Y++ G+
Sbjct: 665 ADLATGETVWRAAEQEGVA-----------------------QSVFVATAAVDLYVKCGE 701
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A +FD+M +DA++W A++ G+ G+ EAL+ F MQ G++PD + L+A
Sbjct: 702 MAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSA 761
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C +G L +G R V +F DN + LID+Y++CG A VFQ+M K+ ++ W
Sbjct: 762 CTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVW 821
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I+G + G A M+K G K + +F G L +C+H GLI+DG RYF M K
Sbjct: 822 NAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTK 881
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y +SPRIEHYGC+VDL SRAG L++A +V++MPM N V+LG+LL C+ + LAE
Sbjct: 882 LYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAE 941
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++K L+ L+P NYV+L+N+Y+ G+W+ A K+R MK +G++K P S +E +
Sbjct: 942 HVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKV 1001
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF GD+SH S+ IY L+ L ++K GY P T
Sbjct: 1002 HEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTT 1037
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/502 (35%), Positives = 276/502 (54%), Gaps = 62/502 (12%)
Query: 33 IQTNNSKSTVNPTVQWTSSISRHCR-------------SGRIAEAALEFTRMTLHG-TNP 78
+Q ++S S VN + SI H R EA + + +M G ++P
Sbjct: 81 LQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSP 140
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLAT 138
+ TF +L CA G +H + K G +V V L+ +Y G +DLA
Sbjct: 141 DKHTFPFVLKACAYIFG--FSEGKQVHCQIVKHGFG-GDVYVNNGLIHLYGSCGCLDLAR 197
Query: 139 VVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE 198
++FDEMP R +SW ++++ V+ G ++
Sbjct: 198 -------------------------------KVFDEMPERSLVSWNSMIDALVRFGEYDS 226
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ---DFKDNVKVCNT 255
AL+ FREMQ S EPD T+ SVL+ACA +G+L +G W H ++L++ D +V V N+
Sbjct: 227 ALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNS 285
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM--QKEGFK 313
LI++Y +CG + A QVFQ M KR L SWN++I+GFA +G EA+ +F+ M ++E +
Sbjct: 286 LIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVR 345
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
P+ V+F G L AC+H G + G +YFD+M + Y + P +EHYGCIVDL +RAG + +A++
Sbjct: 346 PNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAID 405
Query: 374 VVENMPMKPNEVVLGSLLAACRTKG-DIILAERLMKYLVDLDPGVDSN-------YVLLA 425
+V +MPMKP+ V+ SLL AC KG + L+E + + ++ +S+ YVLL+
Sbjct: 406 MVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLS 465
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
+YA+ +W+ G +R+ M GI+K+PG SSIEI HEF AGD SH +++ IY L+
Sbjct: 466 RVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLK 525
Query: 486 LLSFDLKLCGYVPETVAGELYE 507
++ L+ GY+P+ L +
Sbjct: 526 VIDDRLRSIGYLPDRSQAPLVD 547
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/502 (35%), Positives = 276/502 (54%), Gaps = 62/502 (12%)
Query: 33 IQTNNSKSTVNPTVQWTSSISRHCR-------------SGRIAEAALEFTRMTLHG-TNP 78
+Q ++S S VN + SI H R EA + + +M G ++P
Sbjct: 67 LQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSP 126
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLAT 138
+ TF +L CA G +H + K G +V V L+ +Y G +DLA
Sbjct: 127 DKHTFPFVLKACAYIFG--FSEGKQVHCQIVKHGFG-GDVYVNNGLIHLYGSCGCLDLAR 183
Query: 139 VVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE 198
++FDEMP R +SW ++++ V+ G ++
Sbjct: 184 -------------------------------KVFDEMPERSLVSWNSMIDALVRFGEYDS 212
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ---DFKDNVKVCNT 255
AL+ FREMQ S EPD T+ SVL+ACA +G+L +G W H ++L++ D +V V N+
Sbjct: 213 ALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNS 271
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM--QKEGFK 313
LI++Y +CG + A QVFQ M KR L SWN++I+GFA +G EA+ +F+ M ++E +
Sbjct: 272 LIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVR 331
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
P+ V+F G L AC+H G + G +YFD+M + Y + P +EHYGCIVDL +RAG + +A++
Sbjct: 332 PNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAID 391
Query: 374 VVENMPMKPNEVVLGSLLAACRTKG-DIILAERLMKYLVDLDPGVDSN-------YVLLA 425
+V +MPMKP+ V+ SLL AC KG + L+E + + ++ +S+ YVLL+
Sbjct: 392 MVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLS 451
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
+YA+ +W+ G +R+ M GI+K+PG SSIEI HEF AGD SH +++ IY L+
Sbjct: 452 RVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLK 511
Query: 486 LLSFDLKLCGYVPETVAGELYE 507
++ L+ GY+P+ L +
Sbjct: 512 VIDDRLRSIGYLPDRSQAPLVD 533
>gi|7362769|emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/451 (37%), Positives = 265/451 (58%), Gaps = 23/451 (5%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ RM H +P+ TF LL + P L LG H + GLD++ V T+LL+M
Sbjct: 50 YLRMRNHRVSPDFHTFPFLLPSFHN-PLH-LPLGQRTHAQILLFGLDKDP-FVRTSLLNM 106
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y+ G + A VFD K WN++++ Y + G I+ A ++FDEMP R+ ISW+ L+
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 188 NGFVKRGYFEEALECFREMQISG-----VEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
NG+V G ++EAL+ FREMQ+ V P+ T+ +VL+AC +G L G W+H Y+
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFVGEAL 301
K + ++ + LID+Y++CG +E A++VF + K+ + +++++I A+ G E
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECF 286
Query: 302 EYFNSMQ-KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
+ F+ M + P+ V+F G L AC H GLI +G YF +M + + ++P I+HYGC+VD
Sbjct: 287 QLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVD 346
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
LY R+G +++A + + +MPM+P+ ++ GSLL+ R GDI E +K L++LDP
Sbjct: 347 LYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGA 406
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHI 480
YVLL+N+YA G+W GI K PG S +E+ +HEF+ GD S ESE I
Sbjct: 407 YVLLSNVYAKTGRW-----------MEGINKVPGCSYVEVEGVVHEFVVGDESQQESERI 455
Query: 481 YSMLELLSFDLKLCGYVPET--VAGELYEND 509
Y+ML+ + L+ GYV +T V +L E D
Sbjct: 456 YAMLDEIMQRLREAGYVTDTKEVLLDLNEKD 486
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 37/220 (16%)
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL 259
+ + M+ V PD+ T +L + N L +G H +L + V +L+++
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 260 YSRC-------------------------------GCIEFARQVFQRMHKRTLVSWNSII 288
YS C G I+ AR++F M +R ++SW+ +I
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 289 VGFAVNGFVGEALEYFNSMQ----KEGF-KPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
G+ + G EAL+ F MQ E F +P+ + + L+AC G +E G +
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPN 383
K Y V I ++D+Y++ G LE A V + K +
Sbjct: 227 K-YHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 259/459 (56%), Gaps = 34/459 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V +V W+ + + G F + G P++ T ++ C D + L +G
Sbjct: 122 VRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN--LQMG 179
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+IH +V K GLD ++ F A++D Y++
Sbjct: 180 RLIHHIVYKFGLDLDH--------------------------------FVCAALVDMYVK 207
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+IE A +FD+M RD ++WT ++ G+ + G E+L F +M+ GV PD V +++V
Sbjct: 208 CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 267
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
+ ACA +G + I Y+ ++ F+ +V + +ID+Y++CGC+E AR++F RM ++ +
Sbjct: 268 VFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNV 327
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+SW+++I + +G +AL+ F M G PD ++ L ACSHAGL+E+GLR+F
Sbjct: 328 ISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSS 387
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M + Y V ++HY C+VDL RAGRL++AL ++++M ++ +E + G+ L ACRT D++
Sbjct: 388 MWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVV 447
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LAE+ L++L +YVLL+N+YA G+W+ KIR M R ++K PG + IE+
Sbjct: 448 LAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVD 507
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ H+F GD +H S+ IY ML+ LS L+L GYVP+T
Sbjct: 508 NKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDT 546
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 257/459 (55%), Gaps = 34/459 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V +V W+ + + G F + G P++ T ++ C D + L +G
Sbjct: 798 VRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKN--LQMG 855
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+IH +V K GLD ++ V AL+DMY K
Sbjct: 856 RLIHHIVYKFGLDLDH-FVCAALVDMYGKCR----------------------------- 885
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+IE A +FD+M RD ++WT ++ G+ + G E+L F +M+ GV PD V +++V
Sbjct: 886 --EIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTV 943
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
+ ACA +G + I Y+ ++ F+ +V + +ID++++CGC+E AR++F RM ++ +
Sbjct: 944 VFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNV 1003
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+SW+++I + +G +AL+ F M + G P+ ++ L ACSHAGL+E+GLR+F
Sbjct: 1004 ISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSX 1063
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M + Y V ++HY C+VDL RAGRL++AL ++ +M + +E + G+ L ACRT D+
Sbjct: 1064 MWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVX 1123
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LAE+ L++L P +Y+LL+N+YA G+W+ KIR M R ++K PG + IE+
Sbjct: 1124 LAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVD 1183
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ H+F GD +H S+ IY ML+ L L+L GYVP+T
Sbjct: 1184 NKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDT 1222
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 163/351 (46%), Gaps = 50/351 (14%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N +I Y ++ A +FD M VRD++SW+ ++ GF K G + FRE+ G
Sbjct: 98 NKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGAR 157
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD T+ V+ AC ++ L +G IH V K + VC L+D+Y +C IE AR +
Sbjct: 158 PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFL 217
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F +M +R LV+W +I G+A G E+L F M++EG PD V+ + AC+ G +
Sbjct: 218 FDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAM 277
Query: 333 EDGLRYFD--IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP----------- 379
R D I +K +++ + ++D+Y++ G +E A + + M
Sbjct: 278 HKA-RIIDDYIQRKKFQLDVILG--TAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMI 334
Query: 380 -----------------------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL--D 414
M P+++ L SLL AC G L E +++ + D
Sbjct: 335 AAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAG---LVEEGLRFFSSMWED 391
Query: 415 PGVDSN---YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
V ++ Y + ++ G+ D A K+ ++M I+K GL +G+
Sbjct: 392 YSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMT---IEKDEGLWGAFLGA 439
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 160/350 (45%), Gaps = 48/350 (13%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N ++ Y ++ A +FD M VRD++SW+ ++ GF K G + FRE+ G
Sbjct: 774 NKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGAR 833
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD T+ V+ AC ++ L +G IH V K + VC L+D+Y +C IE AR +
Sbjct: 834 PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFL 893
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F +M +R LV+W +I G+A G E+L F+ M++EG PD V+ + AC+ G +
Sbjct: 894 FDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAM 953
Query: 333 EDGLRYFD-IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK---------- 381
D I +K +++ + ++D++++ G +E A + + M K
Sbjct: 954 HKARTIDDYIQRKKFQLDVILG--TAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIA 1011
Query: 382 ------------------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDL--DP 415
PN++ L SLL AC G L E +++ + D
Sbjct: 1012 AYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAG---LVEEGLRFFSXMWEDY 1068
Query: 416 GVD---SNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
V +Y + ++ G+ D A K+ +M +K GL +G+
Sbjct: 1069 SVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMT---XEKDEGLWGAFLGA 1115
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 17/228 (7%)
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
IS L C N+ + +H +N+ V N LI YS ++ A +F M
Sbjct: 66 ISALVNCRNLTQVR---QVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCV 122
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R VSW+ ++ GFA G F + + G +PD + + AC ++ G
Sbjct: 123 RDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLI 182
Query: 339 FDIMKKIYRVSPRIEHYGC--IVDLYSRAGRLEDALNVVENMPMK---PNEVVLGSLLAA 393
I +Y+ ++H+ C +VD+Y + +EDA + + M + V++G
Sbjct: 183 HHI---VYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAEC 239
Query: 394 CRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
+ ++L E++ + GV + V + + A K K R
Sbjct: 240 GKANESLVLFEKMR------EEGVVPDKVAMVTVVFACAKLGAMHKAR 281
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
N+ V N L+ YS ++ A +F M R VSW+ ++ GFA G F +
Sbjct: 769 NLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELI 828
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC--IVDLYSRAG 366
+ G +PD + + AC ++ G I +Y+ ++H+ C +VD+Y +
Sbjct: 829 RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI---VYKFGLDLDHFVCAALVDMYGKCR 885
Query: 367 RLEDALNVVENM 378
+EDA + + M
Sbjct: 886 EIEDARFLFDKM 897
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 263/461 (57%), Gaps = 36/461 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + IS + +G EA F M P+ T +T++S CA S + LG
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ--SGSIELG 285
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + G N +V NA+ID Y +
Sbjct: 286 RQVHLWIDDHGFGSNLKIV--------------------------------NALIDLYSK 313
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++E+A +F+ +P +D ISW L+ G+ ++EAL F+EM SG P+ VT++S+
Sbjct: 314 CGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 373
Query: 222 LNACANVGTLGIGLWIHRYVLK--QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACA++G + IG WIH Y+ K + + + +LID+Y++CG IE A QVF + +
Sbjct: 374 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 433
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+L SWN++I GFA++G + + F+ M+K G +PD ++F G L+ACSH+G+++ G F
Sbjct: 434 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIF 493
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M + Y+++P++EHYGC++DL +G ++A ++ M M+P+ V+ SLL AC+ G+
Sbjct: 494 RTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGN 553
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E + L+ ++P +YVLL+N+YA+ G+W+ K R + +G++K PG SSIE
Sbjct: 554 VELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE 613
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I S +HEF+ GD+ H + IY MLE + L+ G+VP+T
Sbjct: 614 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDT 654
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 214/403 (53%), Gaps = 14/403 (3%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + H S A + M G PN TF +L CA S+ G IHG
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK--SKAFKEGQQIHGH 159
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG D + + V T+L+ MY + GR++ A VFD + ++ A+I GY RG IE+
Sbjct: 160 VLKLGCDLD-LYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIEN 218
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++FDE+PV+D +SW A+++G+ + G ++EALE F++M + V PD T+++V++ACA
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G++ +G +H ++ F N+K+ N LIDLYS+CG +E A +F+R+ + ++SWN++
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KKI 345
I G+ EAL F M + G P+ V+ L AC+H G I+ G R+ + K++
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG-RWIHVYIDKRL 397
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSLLAACRTKGDII 401
V+ ++D+Y++ G +E A V ++ K N ++ G + R
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG-RADASFD 456
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
L R+ K + D D +V L + + G D I RTM
Sbjct: 457 LFSRMRKIGIQPD---DITFVGLLSACSHSGMLDLGRHIFRTM 496
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 166/433 (38%), Gaps = 110/433 (25%)
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD---MYAKFGRMD 135
NH + ++LL C S +IH + K+GL N + + L++ + F +
Sbjct: 33 NHPS-LSLLHNCKTLQSL-----RIIHAQMIKIGLHNTNYAL-SKLIEFCILSPHFEGLP 85
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
A VF ++ + WN M G+ D SA++++
Sbjct: 86 YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLY----------------------- 122
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
C + G+ P+ T VL +CA G IH +VLK ++ V +
Sbjct: 123 -----VCMISL---GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS 174
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV------------------ 297
LI +Y + G +E A +VF + R +VS+ ++I G+A G++
Sbjct: 175 LISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSW 234
Query: 298 -------------GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
EALE F M K +PD + ++AC+ +G IE G R +
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG-RQVHLWID 293
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK----------------------- 381
+ ++ ++DLYS+ G LE A + E +P K
Sbjct: 294 DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 382 -----------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANM 427
PN+V + S+L AC G I + + Y+ GV + L L +M
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 428 YAAVGKWDGAGKI 440
YA G + A ++
Sbjct: 414 YAKCGDIEAAHQV 426
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 124/279 (44%), Gaps = 33/279 (11%)
Query: 209 SGVEPDYVTI-----ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID---LY 260
S +P Y +I +S+L+ C + +L I IH ++K + + LI+ L
Sbjct: 22 SSSDPPYDSIRNHPSLSLLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILS 78
Query: 261 SRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT 320
+ +A VF+ + + L+ WN++ G A++ AL+ + M G P+ +F
Sbjct: 79 PHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFP 138
Query: 321 GALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENM 378
L +C+ + ++G + I + ++ ++ Y ++ +Y + GRLEDA V +
Sbjct: 139 FVLKSCAKSKAFKEGQQ---IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 379 PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD-SNYVLLANMYAAVGKWDGA 437
P + + V +L+ ++G I A++L D P D ++ + + YA G + A
Sbjct: 196 PHR-DVVSYTALIKGYASRGYIENAQKLF----DEIPVKDVVSWNAMISGYAETGNYKEA 250
Query: 438 GKIRRTMKGRGIQKKPGL-----------SSIEIGSGIH 465
++ + M ++ SIE+G +H
Sbjct: 251 LELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/479 (34%), Positives = 269/479 (56%), Gaps = 29/479 (6%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA-------------D 92
V W + + R R+ +A F RM + + I++ +++G A +
Sbjct: 216 VSWNCLMGGYVRKKRLDDARSLFDRMPVR----DKISWNIMITGYAQNGLLSEARRLFEE 271
Query: 93 FPSQCLF-LGAMIHGLVCKLGLDR----------NNVMVGTALLDMYAKFGRMDLATVVF 141
P + +F AM+ G V LD N + A++ Y + +++ A +F
Sbjct: 272 LPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF 331
Query: 142 DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALE 201
D M +++ +WN M+ GY + G+I+ A +FDEMP RD ISW A+++G+ + G EEAL
Sbjct: 332 DQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALH 391
Query: 202 CFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
F +M+ G + + L++CA + L +G +H ++K F+ N L+ +Y
Sbjct: 392 LFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYG 451
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
+CG IE A VF+ + ++ +VSWN++I G+A +GF EAL F SM K KPD V+ G
Sbjct: 452 KCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVG 510
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+ACSH G ++ G+ YF+ M + Y ++ +HY C++DL RAGRL++ALN++++MP
Sbjct: 511 VLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFY 570
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
P+ G+LL A R GD L E+ + + +++P YVLL+N+YAA G+W ++R
Sbjct: 571 PDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMR 630
Query: 442 RTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
M+ +G++K PG S +EI + H F GD SH E+E IY+ LE L +LK G+V T
Sbjct: 631 SKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSST 689
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 128/532 (24%), Positives = 220/532 (41%), Gaps = 130/532 (24%)
Query: 33 IQTNNSKSTV--NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSG- 89
+++ NS ST+ + V+W IS + R G+ A F M T +T+ ++SG
Sbjct: 46 LESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRST----VTYNAMISGY 101
Query: 90 -------CA-----DFPSQCLF-LGAMIHGLVCKLGLD----------RNNVMVGTALLD 126
CA P + L M+ G V L +V+ A+L
Sbjct: 102 LSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLS 161
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR---------------- 170
+A+ G ++ A +FD M VK+ +WN ++ Y++ G IE A R
Sbjct: 162 GFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCL 221
Query: 171 ---------------MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDY 215
+FD MPVRD ISW ++ G+ + G EA F E+ I V +
Sbjct: 222 MGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFA-W 280
Query: 216 VTIIS--VLNACANVGT-----------LGIGLWIHRYVLKQDFKD-----------NVK 251
++S V N + T + I YV Q + N
Sbjct: 281 TAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTS 340
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
NT++ Y++CG I+ A+ +F M +R +SW ++I G+A +G EAL F M+++G
Sbjct: 341 SWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDG 400
Query: 312 FKPDGVSFTGALTACS-----------HAGLIEDGLRY---------------------F 339
+ + AL++C+ H L++ G + F
Sbjct: 401 GILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAF 460
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM--KPNEVVLGSLLAACRTK 397
D+ + I I + ++ Y+R G ++AL + E+M M KP++V L +L+AC
Sbjct: 461 DVFEDI--TEKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHT 518
Query: 398 GDIILAERLMKYLVDL--DPGVDSN---YVLLANMYAAVGKWDGAGKIRRTM 444
G ++ M+Y + + G+ +N Y + ++ G+ D A + ++M
Sbjct: 519 G---FVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSM 567
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 171/366 (46%), Gaps = 34/366 (9%)
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
G+ R + + A++ Y + D A VF+ M + +WN M+ GY++ G++ +A +
Sbjct: 85 GMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARAL 144
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTL 231
F++MP +D +SW A+L+GF + G+ EEA + F +M + + ++ +L+A G +
Sbjct: 145 FNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLV----KNEISWNGLLSAYVQNGRI 200
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
R + + N L+ Y R ++ AR +F RM R +SWN +I G+
Sbjct: 201 EDA----RRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGY 256
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR 351
A NG + EA F + D ++T ++ G++++ R F+ M + VS
Sbjct: 257 AQNGLLSEARRLFEELPIR----DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS-- 310
Query: 352 IEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
+ ++ Y ++ ++E A + + MP + N +++ G+I A K L
Sbjct: 311 ---WNAMIAGYVQSQQIEKARELFDQMPSR-NTSSWNTMVTGYAQCGNIDQA----KILF 362
Query: 412 DLDPGVDS-NYVLLANMYAAVGKWDGA-----------GKIRRTMKGRGIQKKPGLSSIE 459
D P D ++ + + YA G+ + A G + R+ + ++++E
Sbjct: 363 DEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALE 422
Query: 460 IGSGIH 465
+G +H
Sbjct: 423 LGKQLH 428
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/502 (35%), Positives = 276/502 (54%), Gaps = 62/502 (12%)
Query: 33 IQTNNSKSTVNPTVQWTSSISRHCR-------------SGRIAEAALEFTRMTLHG-TNP 78
+Q ++S S VN + SI H R EA + + +M G ++P
Sbjct: 90 LQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSP 149
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLAT 138
+ TF +L CA G +H + K G +V V L+ +Y G +DLA
Sbjct: 150 DKHTFPFVLKACAYIFG--FSEGKQVHCQIVKHGFG-GDVYVNNGLIHLYGSCGCLDLAR 206
Query: 139 VVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE 198
++FDEMP R +SW ++++ V+ G ++
Sbjct: 207 -------------------------------KVFDEMPERSLVSWNSMIDALVRFGEYDS 235
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ---DFKDNVKVCNT 255
AL+ FREMQ S EPD T+ SVL+ACA +G+L +G W H ++L++ D +V V N+
Sbjct: 236 ALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNS 294
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM--QKEGFK 313
LI++Y +CG + A QVFQ M KR L SWN++I+GFA +G EA+ +F+ M ++E +
Sbjct: 295 LIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVR 354
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
P+ V+F G L AC+H G + G +YFD+M + Y + P +EHYGCIVDL +RAG + +A++
Sbjct: 355 PNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAID 414
Query: 374 VVENMPMKPNEVVLGSLLAACRTKG-DIILAERLMKYLVDLDPGVDSN-------YVLLA 425
+V +MPMKP+ V+ SLL AC KG + L+E + + ++ +S+ YVLL+
Sbjct: 415 MVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLS 474
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
+YA+ +W+ G +R+ M GI+K+PG SSIEI HEF AGD SH +++ IY L+
Sbjct: 475 RVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLK 534
Query: 486 LLSFDLKLCGYVPETVAGELYE 507
++ L+ GY+P+ L +
Sbjct: 535 VIDDRLRSIGYLPDRSQAPLVD 556
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 154/403 (38%), Positives = 238/403 (59%), Gaps = 2/403 (0%)
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR-VKSSFTWNAMID 157
F+G +H L K G ++ V A + Y G + VFD + V+ TWNA++
Sbjct: 149 FMGTHVHALAVKAGA-AGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLA 207
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GY+R G + A +FD MPVRD +SW+ ++ G+VK G E AL F+ M GV+ +
Sbjct: 208 GYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAA 267
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I++ L+A A +G L G ++H V + +V + LID+YS+CG + A++VF M
Sbjct: 268 IVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMP 327
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+R + +WNS+I G A +G +A++ F EGF P ++F G L ACS GL+++G R
Sbjct: 328 RRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRR 387
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF +M + Y + +EHYGC+VDL SRAG +++A+ ++E M + P+ V+ G++L+AC+
Sbjct: 388 YFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRH 447
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G + L + L++LDP D YVLLA++YA KWD K+R+ M RG K G S
Sbjct: 448 GLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWSL 507
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+E +H+F+ GD +H +S IY+ML ++ L GYVP+
Sbjct: 508 MEAHGIVHKFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPDV 550
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 123/329 (37%), Gaps = 75/329 (22%)
Query: 94 PSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLAT---------VVFDAM 144
P L+ H + LGL AL + A R+ LA ++F
Sbjct: 35 PRPALYHVLQAHARLAVLGL-----ATARALPQLLAALPRLTLAAADVSHSYPLLLFRCS 89
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFR 204
S+F N + +R +R+F +P R+ S+T LL E A
Sbjct: 90 NCTSAFASNHL----LRVLPHPLPLRLFPRLPRRNPHSFTFLLASLSNHLDTEPA----- 140
Query: 205 EMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
A ++ + +G +H +K ++ V N I Y CG
Sbjct: 141 -------------------AAGSIASRFMGTHVHALAVKAGAAGDLYVRNAQIHFYGVCG 181
Query: 265 CIEFARQVFQRMH-KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ--------------- 308
+ R+VF + R +V+WN+++ G+ G VG A E F+ M
Sbjct: 182 DVAAMRKVFDELPIVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYV 241
Query: 309 ----------------KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
+G K + + AL+A + GL+E G +++K++ ++ +
Sbjct: 242 KEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRV-GMTMSV 300
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMK 381
++D+YS+ G + A V + MP +
Sbjct: 301 NLGAALIDMYSKCGSVAAAKEVFDAMPRR 329
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 156/455 (34%), Positives = 265/455 (58%), Gaps = 37/455 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S +S + + G EA F R+ G P+ ++ +++L C + L LG +
Sbjct: 184 VSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGD--LELGRWV 241
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
G V + G+ + N +G+AL+ MY+ + G+
Sbjct: 242 EGFVVERGM-KVNSYIGSALISMYS-------------------------------KCGE 269
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ S+ R+FD MP RD I+W A ++ + + G +EA+ F M+ +GV+P+ VT+ +VL+A
Sbjct: 270 LVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSA 329
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L +G + Y + + ++ V LID+Y++CG +E A++VF M ++ SW
Sbjct: 330 CASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASW 389
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEG--FKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
N++I A +G EAL F M EG +P+ ++F L+AC HAGL+++G R FD+M
Sbjct: 390 NAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMM 449
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
++ + P+IEHY C+VDL SRAG L +A +V+E MP KP+ V LG+L +AC+ K ++ +
Sbjct: 450 STLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDI 509
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
ER+++ L++LDP NY++ + +Y + WD A ++R M+ G+ K PG S IE+G+
Sbjct: 510 GERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGN 569
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV 497
+ EF++GD ++S + ++++LL +LK GY+
Sbjct: 570 QLREFLSGDGLTLDSIDVRNIIDLLYEELKKEGYL 604
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 182/364 (50%), Gaps = 37/364 (10%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ +M +PN+ TF + CA+ + + + H V KLGLD ++ V
Sbjct: 105 YHQMKTLNISPNNFTFPFVFLACANLEE--IRMARLAHCEVFKLGLDNDHHTV------- 155
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
N+M+ Y R G+ A ++FDE+ +D +SW +LL
Sbjct: 156 -------------------------NSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLL 190
Query: 188 NGFVKRGYFEEALECF-REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
+G+ K G+ EA+E F R + SG EPD ++++SVL AC +G L +G W+ +V+++
Sbjct: 191 SGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGM 250
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
K N + + LI +YS+CG + +R++F M R ++WN+ I +A NG EA+ F+S
Sbjct: 251 KVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHS 310
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M++ G P+ V+ T L+AC+ G ++ G + D + I ++D+Y++ G
Sbjct: 311 MKENGVDPNKVTLTAVLSACASIGALDLG-KQMDEYATHRGLQHDIFVATALIDMYAKCG 369
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN 426
LE A V +MP K N+ ++++A + G A L + + D N + +
Sbjct: 370 SLESAQRVFNDMPRK-NDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVS 428
Query: 427 MYAA 430
+ +A
Sbjct: 429 LLSA 432
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 135/285 (47%), Gaps = 45/285 (15%)
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL 259
L + +M+ + P+ T V ACAN+ + + H V K ++ N+++ +
Sbjct: 102 LHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTM 161
Query: 260 YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE-GFKPDGVS 318
Y RCG AR+VF + ++ LVSWNS++ G+A GF EA+E F +++E GF+PD +S
Sbjct: 162 YFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMS 221
Query: 319 FTGALTACSHAGLIEDGLRYFD--IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
L AC G +E G R+ + ++++ +V+ I ++ +YS+ G L + + +
Sbjct: 222 LVSVLGACGELGDLELG-RWVEGFVVERGMKVNSYIG--SALISMYSKCGELVSSRRIFD 278
Query: 377 NMPMK----------------------------------PNEVVLGSLLAACRTKGDIIL 402
MP + PN+V L ++L+AC + G + L
Sbjct: 279 GMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDL 338
Query: 403 AERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTM 444
+++ +Y G+ + + L +MYA G + A ++ M
Sbjct: 339 GKQMDEYAT--HRGLQHDIFVATALIDMYAKCGSLESAQRVFNDM 381
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 257/461 (55%), Gaps = 36/461 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
+ V W + IS + GR EA F M P+ T T+LS C S + LG
Sbjct: 172 IKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTH--SGNVELG 229
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IH + G N +V NA+ID Y +
Sbjct: 230 RQIHSWIDNHGFGSNLKLV--------------------------------NALIDLYSK 257
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++E A +F+ + +D ISW L+ G+ + +EAL F+EM G P+ VT++S+
Sbjct: 258 CGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSI 317
Query: 222 LNACANVGTLGIGLWIHRYVLKQ--DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACA++G + IG WIH Y+ K+ N + +LID+Y++CG IE A QVF + +
Sbjct: 318 LPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNK 377
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+L S N++I GFA++G A + + M+K+G +PD ++F G L+ACSHAGL + G + F
Sbjct: 378 SLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIF 437
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M YR+ P++EHYGC++DL R+G ++A ++ +M M+P+ V+ GSLL AC+ +
Sbjct: 438 KSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKN 497
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E + + L+ ++P +YVLL+N+YA +WD ++R + +G++K PG SSIE
Sbjct: 498 LELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIE 557
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I S +HEF+ GD+ H +++ IY MLE + L G+V +T
Sbjct: 558 IDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDT 598
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 214/413 (51%), Gaps = 15/413 (3%)
Query: 39 KSTVNPT-VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
KS P + W + I H S A + M G +PN TF L CA S+
Sbjct: 36 KSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCA--KSKA 93
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
G IH + K GL + + V T+L+ MYA+ G ++ A VFD + ++ AMI
Sbjct: 94 AQEGKQIHAQILKYGLTVD-LHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMIT 152
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GY RG+++ A +MFDE+P++D +SW A+++G+ + G ++EALE F EM V+PD T
Sbjct: 153 GYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDEST 212
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
+ +VL+ C + G + +G IH ++ F N+K+ N LIDLYS+CG +E A +F+ +
Sbjct: 213 MATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQ 272
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+ ++SWN++I G+A EAL F M K G P+ V+ L AC+H G I+ G R
Sbjct: 273 YKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIG-R 331
Query: 338 YFDIM--KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSLL 391
+ + KK+ + ++D+Y++ G +E A V + + K N ++ G +
Sbjct: 332 WIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAM 391
Query: 392 AACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
R L R+ K ++ D D +V L + + G D KI ++M
Sbjct: 392 HG-RADAAFDLLSRMKKDGIEPD---DITFVGLLSACSHAGLSDLGRKIFKSM 440
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 161/411 (39%), Gaps = 104/411 (25%)
Query: 110 KLGLDRNNVMVGTALLD---MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
K+GL N + + LLD + F + A VF +++ + +WN MI G+ D
Sbjct: 2 KIGLHNTNYAL-SKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI 60
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
SA+ ++ M IS G+ P+ T + +CA
Sbjct: 61 SALNLYVYM-----ISL--------------------------GLSPNSYTFPFLFKSCA 89
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF------------- 273
G IH +LK ++ V +LI +Y++ G +E A +VF
Sbjct: 90 KSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTA 149
Query: 274 --------------QRMHK----RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
Q+M + +VSWN++I G+A G EALE FN M K KPD
Sbjct: 150 MITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPD 209
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
+ L+ C+H+G +E G + + + ++ ++DLYS+ G +E A +
Sbjct: 210 ESTMATVLSTCTHSGNVELGRQIHSWIDN-HGFGSNLKLVNALIDLYSKCGEMERAHGLF 268
Query: 376 ENMPMK----------------------------------PNEVVLGSLLAACRTKGDII 401
E + K PN+V + S+L AC G I
Sbjct: 269 EGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAID 328
Query: 402 LAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
+ + Y+ G+ +N L L +MYA G + A ++ T+ + +
Sbjct: 329 IGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSL 379
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 103/218 (47%), Gaps = 24/218 (11%)
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+ +A VF+ + + +SWN++I G A++ AL + M G P+ +F +
Sbjct: 28 LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87
Query: 326 CSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNE 384
C+ + ++G + + I+K Y ++ + + ++ +Y++ G +EDA V + + +
Sbjct: 88 CAKSKAAQEGKQIHAQILK--YGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHR-DV 144
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD-SNYVLLANMYAAVGKWDGAGKIRRT 443
V +++ ++G++ A+++ D P D ++ + + YA +G++ A ++
Sbjct: 145 VSYTAMITGYASRGNMDKAQKMF----DEIPIKDVVSWNAMISGYAEIGRYKEALELFNE 200
Query: 444 MKGRGIQKKPGLSS-------------IEIGSGIHEFM 468
M + KP S+ +E+G IH ++
Sbjct: 201 MMKMDV--KPDESTMATVLSTCTHSGNVELGRQIHSWI 236
>gi|414883628|tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays]
Length = 635
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 154/403 (38%), Positives = 238/403 (59%), Gaps = 2/403 (0%)
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR-VKSSFTWNAMID 157
F+G +H L K G ++ V A + Y G + VFD + V+ TWNA++
Sbjct: 149 FMGTHVHALAVKAG-AAGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLA 207
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GY+R G + A +FD MPVRD +SW+ ++ G+VK G E AL F+ M GV+ +
Sbjct: 208 GYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAA 267
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I++ L+A A +G L G ++H V + +V + LID+YS+CG + A++VF M
Sbjct: 268 IVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMP 327
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+R + +WNS+I G A +G +A++ F EGF P ++F G L ACS GL+++G R
Sbjct: 328 RRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRR 387
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF +M + Y + +EHYGC+VDL SRAG +++A+ ++E M + P+ V+ G++L+AC+
Sbjct: 388 YFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRH 447
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G + L + L++LDP D YVLLA++YA KWD K+R+ M RG K G S
Sbjct: 448 GLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWSL 507
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+E +H+F+ GD +H +S IY+ML ++ L GYVP+
Sbjct: 508 MEAHGIVHKFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPDV 550
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 123/329 (37%), Gaps = 75/329 (22%)
Query: 94 PSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLAT---------VVFDAM 144
P L+ H + LGL AL + A R+ LA ++F
Sbjct: 35 PRPALYHVLQAHARLAVLGL-----ATARALPQLLAALPRLTLAAADVSHSYPLLLFRCS 89
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFR 204
S+F N + +R +R+F +P R+ S+T LL E A
Sbjct: 90 NCTSAFASNHL----LRVLPHPLPLRLFPRLPRRNPHSFTFLLASLSNHLDTEPA----- 140
Query: 205 EMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
A ++ + +G +H +K ++ V N I Y CG
Sbjct: 141 -------------------AAGSIASRFMGTHVHALAVKAGAAGDLYVRNAQIHFYGVCG 181
Query: 265 CIEFARQVFQRMH-KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ--------------- 308
+ R+VF + R +V+WN+++ G+ G VG A E F+ M
Sbjct: 182 DVAAMRKVFDELPIVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYV 241
Query: 309 ----------------KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
+G K + + AL+A + GL+E G +++K++ ++ +
Sbjct: 242 KEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRV-GMTMSV 300
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMK 381
++D+YS+ G + A V + MP +
Sbjct: 301 NLGAALIDMYSKCGSVAAAKEVFDAMPRR 329
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 256/448 (57%), Gaps = 34/448 (7%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
++ IS + +G EA F + G PN + ++L CA + + LG +H
Sbjct: 418 STMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAA--MKLGQELHSYA 475
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
K + V +AL+DMYAK GR+DL+ +
Sbjct: 476 LKNAYE-GRCYVESALMDMYAKCGRLDLSHYI---------------------------- 506
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
F ++ +D ++W ++++ F + G EEAL FREM + GV+ VTI SVL+ACA++
Sbjct: 507 ---FSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASL 563
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
+ G IH V+K + ++ + LID+Y +CG +E+A +VF+ M ++ VSWNSII
Sbjct: 564 PAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSII 623
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
+ G V E++ MQ+EGFK D V+F ++AC+HAG +++GLR F M + Y++
Sbjct: 624 ASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQI 683
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
+PR+EH+ C+VDLYSRAG+L+ A+ ++ +MP KP+ + G+LL ACR ++ LAE +
Sbjct: 684 APRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQ 743
Query: 409 YLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFM 468
L LDP YVL++N+ A G+WDG K+RR MK +QK PG S +++ + H F+
Sbjct: 744 ELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFV 803
Query: 469 AGDRSHIESEHIYSMLELLSFDLKLCGY 496
A D+SH +SE IY L+ + +L+ G+
Sbjct: 804 AADKSHPDSEDIYMSLKSILLELREEGH 831
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 190/400 (47%), Gaps = 41/400 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W IS ++G + +A L F M G P+ +T ++LL D G +H
Sbjct: 314 VTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNG--FNQGKELH 371
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G + RN V MD+ F +A++D Y + +
Sbjct: 372 GYIV-----RNCV--------------HMDV-------------FLVSALVDIYFKCRAV 399
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A ++D D + + +++G+V G +EA++ FR + G+ P+ V I SVL AC
Sbjct: 400 RMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ + +G +H Y LK ++ V + L+D+Y++CG ++ + +F ++ + V+WN
Sbjct: 460 ASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWN 519
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S+I FA NG EAL F M EG K V+ + L+AC+ I G ++ K
Sbjct: 520 SMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIK- 578
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ + ++D+Y + G LE A V E+MP K NEV S++A+ G + +
Sbjct: 579 GPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEK-NEVSWNSIIASYGAYGLVKESVS 637
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
L++++ + G +++V + +A AG+++ ++
Sbjct: 638 LLRHMQ--EEGFKADHVTFLALVSACAH---AGQVQEGLR 672
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 193/441 (43%), Gaps = 70/441 (15%)
Query: 31 ISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNP--NHITFITLLS 88
+++ ++ + + W I +G A L + +M H + P + TF ++
Sbjct: 95 VAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVK 154
Query: 89 GCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS 148
CA + + LG ++H LGLD ++ VG+AL+ MYA G +++DA +V
Sbjct: 155 SCAALGA--IALGRLVHRTARTLGLD-GDMFVGSALIKMYANGG------LLWDARQV-- 203
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
FD M RD + W +++G+VK G A+E F +M+
Sbjct: 204 -----------------------FDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRA 240
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
SG EP++ T+ L+ A L G+ +H +K + V V NTL+ +Y++C C++
Sbjct: 241 SGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDD 300
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA--- 325
++F M + LV+WN +I G NGFV +AL F MQK G +PD V+ L A
Sbjct: 301 GWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTD 360
Query: 326 -----------------CSHAGL--------IEDGLRYFDIMKKIYRVSPRIEHY--GCI 358
C H + I R + + +Y S I+ +
Sbjct: 361 LNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTM 420
Query: 359 VDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKY-LVDLD 414
+ Y G ++A+ + + ++PN V + S+L AC + + L + L Y L +
Sbjct: 421 ISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAY 480
Query: 415 PGVDSNYVLLANMYAAVGKWD 435
G L +MYA G+ D
Sbjct: 481 EGRCYVESALMDMYAKCGRLD 501
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 168/355 (47%), Gaps = 38/355 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + + ++G ++ A F M G PN T LS A LF G +H
Sbjct: 213 VLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSAT--ESDLFFGVQLH 270
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L K GL+ + V V L+ MYAK +D DG+
Sbjct: 271 TLAVKYGLE-SEVAVANTLVSMYAKCKCLD---------------------DGW------ 302
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
++F MP D ++W +++G V+ G+ ++AL F +MQ SG+ PD VT++S+L A
Sbjct: 303 ----KLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPAL 358
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++ G +H Y+++ +V + + L+D+Y +C + A+ V+ +V +
Sbjct: 359 TDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGS 418
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKK 344
++I G+ +NG EA++ F + ++G +P+ V+ L AC+ ++ G +K
Sbjct: 419 TMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKN 478
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
Y +E ++D+Y++ GRL+ + + + K +EV S++++ G+
Sbjct: 479 AYEGRCYVE--SALMDMYAKCGRLDLSHYIFSKISAK-DEVTWNSMISSFAQNGE 530
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 147/357 (41%), Gaps = 38/357 (10%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
+ +L GC PS L LG +HG GL + + T L+ MY R A VF
Sbjct: 42 LLAVLRGCVS-PSH-LSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFS 99
Query: 143 AM---RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
++ + WN +I G GD SA+ + +M W
Sbjct: 100 SLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKM-------WA--------------- 137
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL 259
S PD T V+ +CA +G + +G +HR ++ V + LI +
Sbjct: 138 -------HPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKM 190
Query: 260 YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
Y+ G + ARQVF M +R V WN ++ G+ G V A+E F M+ G +P+ +
Sbjct: 191 YANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATL 250
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
L+ + + G++ + K Y + + +V +Y++ L+D + MP
Sbjct: 251 ACFLSVSATESDLFFGVQLHTLAVK-YGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP 309
Query: 380 MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDG 436
+ + V +++ C G + + L+ + G+ + V L ++ A+ +G
Sbjct: 310 -RDDLVTWNGMISGCVQNG--FVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNG 363
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 181/467 (38%), Positives = 260/467 (55%), Gaps = 13/467 (2%)
Query: 42 VNPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTN---PNHITFITLLSGCADFPSQC 97
V P V W +S RSGR +A + T+HG P+ LS D
Sbjct: 117 VEPNVITWNGLVSGLNRSGRARDAVVALA--TMHGEGLLRPDATGVSCALSAVGDV--GL 172
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
+ +G +HG K G R + V TAL+DMY K G+ VFD + NA+I
Sbjct: 173 VSVGQQLHGYAVKAGC-RADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIA 231
Query: 158 GYMRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEP 213
G R + A+R+F E R + +SWT+++ V+ G EA+E FREMQ G EP
Sbjct: 232 GLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEP 291
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
+ VTI VL A ANV L G H + L++ F +V V + L+D+Y++CG ++ AR +F
Sbjct: 292 NSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIF 351
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
M R +VSWN++I G+A+ G A+ F+SM K KPD V+FT L AC+ AGL E
Sbjct: 352 DTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTE 411
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
+G YF M Y VSPR+EHY C+V L RAG+L++A +++ +MP +P+ + GSLL +
Sbjct: 412 EGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGS 471
Query: 394 CRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKP 453
CR G++ LAE + L L+P NYVLL+N+YA+ WD ++R MK G++K+
Sbjct: 472 CRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEK 531
Query: 454 GLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
G S IEI + +H +AGD SH I + L+ ++ G+VP T
Sbjct: 532 GCSWIEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPST 578
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 122/275 (44%), Gaps = 16/275 (5%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ T C P L +H + GL R+ V ++LL Y + G A
Sbjct: 18 PDPHLLPTAFKSCPTLP-----LARALHAVAEVSGLARDP-FVASSLLHAYLRLGTTGNA 71
Query: 138 TVVFDAMR--VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDA------ISWTALLNG 189
+FD M ++ W+A++ + RGD E A R+ +EM RD I+W L++G
Sbjct: 72 RALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMR-RDGGVEPNVITWNGLVSG 130
Query: 190 FVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD 248
+ G +A+ M G + PD + L+A +VG + +G +H Y +K +
Sbjct: 131 LNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRA 190
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
+ V LID+Y +CG +VF + S N++I G + N V EAL F
Sbjct: 191 DACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFV 250
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
G + + VS+T + C G + + +F M+
Sbjct: 251 DRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQ 285
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/461 (35%), Positives = 262/461 (56%), Gaps = 36/461 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
+ V W + IS + +G EA F M P+ T ++++S CA S + LG
Sbjct: 197 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQ--SASIELG 254
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + G N +V NA+ID Y++
Sbjct: 255 RQVHSWIDDHGFGSNLKIV--------------------------------NALIDLYIK 282
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++E+A +F+ + +D ISW L+ G+ ++EAL F+EM SG P+ VT++S+
Sbjct: 283 CGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSI 342
Query: 222 LNACANVGTLGIGLWIHRYVLK--QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L ACA++G + IG WIH Y+ K + + +LID+Y++CG IE A+QVF + R
Sbjct: 343 LPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNR 402
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+L SWN++I GFA++G A + F+ M+K +PD ++F G L+ACSH+G+++ G F
Sbjct: 403 SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIF 462
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
MK+ Y+++P++EHYGC++DL +G ++A ++ M M+P+ V+ SLL AC+ +
Sbjct: 463 RSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYAN 522
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E + L+ ++P +YVLL+N+YA G+W+ KIR + +G++K PG SSIE
Sbjct: 523 VELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIE 582
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I S +HEF+ GD+ H + IY MLE + L+ G+VP+T
Sbjct: 583 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 623
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 213/404 (52%), Gaps = 14/404 (3%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + H S A + M G PN TF LL CA S+ G IHG
Sbjct: 71 WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK--SKAFREGQQIHGH 128
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG D + + V T+L+ MY + GR++ A VFD + ++ A+I GY +G I S
Sbjct: 129 VLKLGYDLD-LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIAS 187
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +MFDE+P++D +SW A+++G+ + G +EALE F+EM + V PD T++SV++ACA
Sbjct: 188 AQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQ 247
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
++ +G +H ++ F N+K+ N LIDLY +CG +E A +F+ + + ++SWN++
Sbjct: 248 SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTL 307
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD--IMKKI 345
I G+ EAL F M + G P+ V+ L AC+H G IE G R+ I K++
Sbjct: 308 IGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG-RWIHVYINKRL 366
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLGSLLAACRTKGDII 401
V+ H ++D+Y++ G +E A V +++ + N ++ G + R
Sbjct: 367 KGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHG-RANAAFD 425
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+ R+ K ++ D D +V L + + G D I R+MK
Sbjct: 426 IFSRMRKNEIEPD---DITFVGLLSACSHSGMLDLGRHIFRSMK 466
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 167/415 (40%), Gaps = 56/415 (13%)
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLD---MYAKFGRMD 135
NH + ++LL C S MIH + K GL N + + L++ + F +
Sbjct: 2 NHPS-LSLLHNCKTLQSL-----RMIHAQMIKTGLHNTNYAL-SKLIEFCVLSPHFDGLP 54
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP----VRDAISWTALLNGFV 191
A VF+ ++ + WN M G+ D SA+ ++ M + + ++ LL
Sbjct: 55 YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCA 114
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
K F E + + G + D S+++ G L R V Q +V
Sbjct: 115 KSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDA----RKVFDQSSHRDVV 170
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
LI Y+ G I A+++F + + +VSWN++I G+A G EALE F M K
Sbjct: 171 SYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN 230
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
+PD + ++AC+ + IE G + + + ++ ++DLY + G +E A
Sbjct: 231 VRPDESTMVSVVSACAQSASIELGRQVHSWIDD-HGFGSNLKIVNALIDLYIKCGEVETA 289
Query: 372 LNVVENMPMK----------------------------------PNEVVLGSLLAACRTK 397
+ E + K PN+V + S+L AC
Sbjct: 290 CGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHL 349
Query: 398 GDIILAERLMKYLVDLDPGV---DSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
G I + + Y+ GV S+ L +MYA G + A ++ ++ R +
Sbjct: 350 GAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSL 404
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 178/502 (35%), Positives = 276/502 (54%), Gaps = 62/502 (12%)
Query: 33 IQTNNSKSTVNPTVQWTSSISRHCR-------------SGRIAEAALEFTRMTLHG-TNP 78
+Q ++S S VN + SI H R EA + + +M G ++P
Sbjct: 147 LQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSP 206
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLAT 138
+ TF +L CA G +H + K G +V V L+ +Y G +DLA
Sbjct: 207 DKHTFPFVLKACAYIFG--FSEGKQVHCQIVKHGFG-GDVYVNNGLIHLYGSCGCLDLAR 263
Query: 139 VVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE 198
++FDEMP R +SW ++++ V+ G ++
Sbjct: 264 -------------------------------KVFDEMPERSLVSWNSMIDALVRFGEYDS 292
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ---DFKDNVKVCNT 255
AL+ FREMQ S EPD T+ SVL+ACA +G+L +G W H ++L++ D +V V N+
Sbjct: 293 ALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNS 351
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM--QKEGFK 313
LI++Y +CG + A QVFQ M KR L SWN++I+GFA +G EA+ +F+ M ++E +
Sbjct: 352 LIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVR 411
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
P+ V+F G L AC+H G + G +YFD+M + Y + P +EHYGCIVDL +RAG + +A++
Sbjct: 412 PNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAID 471
Query: 374 VVENMPMKPNEVVLGSLLAACRTKG-DIILAERLMKYLVDLDPGVDSN-------YVLLA 425
+V +MPMKP+ V+ SLL AC KG + L+E + + ++ +S+ YVLL+
Sbjct: 472 MVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLS 531
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
+YA+ +W+ G +R+ M GI+K+PG SSIEI HEF AGD SH +++ IY L+
Sbjct: 532 RVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLK 591
Query: 486 LLSFDLKLCGYVPETVAGELYE 507
++ L+ GY+P+ L +
Sbjct: 592 VIDDRLRSIGYLPDRSQAPLVD 613
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 271/523 (51%), Gaps = 69/523 (13%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W S I+ H +G+ EA F M L G P H TF +++ CA L L ++
Sbjct: 269 SVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKE--LGLVRVL 326
Query: 105 HGLVCKLGLDRN-NVMVG------------------------------TALLDMYAKFGR 133
H K GL N NV+ TA++ Y + G
Sbjct: 327 HCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGD 386
Query: 134 MDLATVVFDAMR-----------------------------------VKSSFTWNAMIDG 158
D A +F MR KSS A++D
Sbjct: 387 TDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEIHAEVIKTNYEKSSSVGTALLDA 446
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+++ G+I AV++F+ + +D I+W+A+L G+ + G EEA + F ++ G++P+ T
Sbjct: 447 FVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTF 506
Query: 219 ISVLNAC-ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
S++NAC A ++ G H Y +K + + V ++L+ LY++ G IE A ++F+R
Sbjct: 507 CSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQK 566
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+R LVSWNS+I G+A +G +ALE F MQK + D ++F G ++AC+HAGL+ G
Sbjct: 567 ERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQN 626
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF+IM + ++P +EHY C++DLYSRAG L A++++ MP P V +LAA R
Sbjct: 627 YFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVH 686
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
+I L + + ++ L+P + YVLL+N+YAA G W +R+ M R ++K+PG S
Sbjct: 687 RNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSW 746
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IE+ + + F+AGD SH S+HIYS L L+ L+ GY P+T
Sbjct: 747 IEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDT 789
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 138/284 (48%), Gaps = 38/284 (13%)
Query: 54 RHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA-DFPSQCLFLGAMIHGLVCKLG 112
R+ R + EA F + G +P+ T +LS CA F +G +H K G
Sbjct: 76 RYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGT---VGEQVHCQCVKCG 132
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
L +++ VG +L+DMY + G++ R+F
Sbjct: 133 L-VHHLSVGNSLVDMYT-------------------------------KTGNVRDGRRVF 160
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
DEM RD +SW +LL G+ + ++ E F MQ+ G PDY T+ +V+ A AN G +
Sbjct: 161 DEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVA 220
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
IG+ IH V+K F+ VCN+LI + S+ G + AR VF M + VSWNS+I G
Sbjct: 221 IGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHV 280
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+NG EA E FN+MQ G KP +F + +C A L E GL
Sbjct: 281 INGQDLEAFETFNNMQLAGAKPTHATFASVIKSC--ASLKELGL 322
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 183/418 (43%), Gaps = 74/418 (17%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F M + G P++ T T+++ A+ + +G IH LV KLG + +V +L+ M
Sbjct: 191 FCLMQVEGYRPDYYTVSTVIAALAN--QGAVAIGMQIHALVVKLGFETER-LVCNSLISM 247
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
+K G + A VVF D M +D++SW +++
Sbjct: 248 LSKSGMLRDARVVF-------------------------------DNMENKDSVSWNSMI 276
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
G V G EA E F MQ++G +P + T SV+ +CA++ LG+ +H LK
Sbjct: 277 AGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLS 336
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHK-RTLVSWNSIIVGFAVNGFVGEALEYFNS 306
N V L+ ++C I+ A +F MH +++VSW ++I G+ NG +A+ F+
Sbjct: 337 TNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSL 396
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIED----------------GLRYFDIMKKIYRVSP 350
M++EG KP+ +++ LT HA I + G D KI +S
Sbjct: 397 MRREGVKPNHFTYSTILTV-QHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISD 455
Query: 351 RIE-----------HYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRT 396
++ + ++ Y++AG E+A + + +KPNE S++ AC
Sbjct: 456 AVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTA 515
Query: 397 -KGDIILAERLMKYLVDLDPG----VDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+ ++ Y + L V S+ V L YA G + A +I + K R +
Sbjct: 516 PTASVEQGKQFHAYAIKLRLNNALCVSSSLVTL---YAKRGNIESAHEIFKRQKERDL 570
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 124/233 (53%), Gaps = 2/233 (0%)
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+R D A ++FD+ P+RD LL + + +EAL F + SG+ PD T+
Sbjct: 47 LRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMS 106
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
VL+ CA +G +H +K ++ V N+L+D+Y++ G + R+VF M R
Sbjct: 107 CVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDR 166
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+VSWNS++ G++ N F + E F MQ EG++PD + + + A ++ G + G++
Sbjct: 167 DVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIH 226
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
++ K+ + R+ ++ + S++G L DA V +NM K + V S++A
Sbjct: 227 ALVVKLGFETERLV-CNSLISMLSKSGMLRDARVVFDNMENK-DSVSWNSMIA 277
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 153/437 (35%), Positives = 256/437 (58%), Gaps = 3/437 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I+ + ++G EA F M G + T ++LL C+ L G ++
Sbjct: 176 VVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACS--AEGNLEFGKLV 233
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + G R ++++ AL+DMY K G + +A FD M K++ +W +M+ +R
Sbjct: 234 HSHLLVRGC-RIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRAS 292
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I++A F+++P + ISW A+++ +V+ G F EAL+ + M++ G+ PD T+ +VL+A
Sbjct: 293 IDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSA 352
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C +G L G IH + V + N+L+D+Y+RCG ++ A +F M + ++SW
Sbjct: 353 CGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISW 412
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+II A++G +AL +F SM + F PD ++F L+AC+H GL+E G YF M+
Sbjct: 413 NAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRH 472
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y V P +EHY C+VDL R G+L A++++++MPM+P+ VV G+LL ACR G I + +
Sbjct: 473 VYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGK 532
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+++K L++L+ +VL++NM +W+ ++R+ M+ G++K G+SSIE S I
Sbjct: 533 QVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNSNI 592
Query: 465 HEFMAGDRSHIESEHIY 481
HE A H S+ +Y
Sbjct: 593 HESGAEGIGHESSDDMY 609
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 195/468 (41%), Gaps = 104/468 (22%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
+ S I +C S EA M G PN T LL CA Q + HG+
Sbjct: 78 YNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARV--QAWEHVMVTHGV 135
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG V VG ALL YA G + + FD M ++ +WN+MI+GY + G+
Sbjct: 136 VVKLGF-VGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNT-- 192
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
EA F M+ G+ D T++S+L AC+
Sbjct: 193 -----------------------------REACSLFEGMRRQGLLADEFTLVSLLFACSA 223
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG----------------------- 264
G L G +H ++L + + ++ + N L+D+Y +CG
Sbjct: 224 EGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSM 283
Query: 265 --------CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
I+ AR F+++ +++++SWN++I + G EAL+ +N M+ G PD
Sbjct: 284 LCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDE 343
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
+ L+AC G + G D ++ + +P + + ++D+Y+R G+++ A+++
Sbjct: 344 FTLAAVLSACGQLGDLASGKMIHDCIRDNFH-NPGVALFNSLLDMYARCGQVDTAISLFS 402
Query: 377 NMPMK----------------------------------PNEVVLGSLLAACRTKGDIIL 402
MP K P+E+ +LL+AC G +
Sbjct: 403 EMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNHGGLLEA 462
Query: 403 AE---RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447
+ + M+++ ++ PGV+ +Y + ++ G+ A + + M R
Sbjct: 463 GQYYFQAMRHVYNVKPGVE-HYACMVDLLGRGGQLAKAVDLIKDMPMR 509
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 114/239 (47%), Gaps = 4/239 (1%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G + A ++FD +P D + +L+ + +EAL R M G+ P+ T+ +L
Sbjct: 58 GGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLL 117
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
ACA V + H V+K F V V N L+ Y+ G + +R+ F M R +V
Sbjct: 118 KACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVV 177
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDI 341
SWNS+I G+A G EA F M+++G D + L ACS G +E G L + +
Sbjct: 178 SWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHL 237
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+ + R+ + + +VD+Y + G L A + MP K N V S+L A + I
Sbjct: 238 LVRGCRIDLILAN--ALVDMYGKCGDLLMAHTCFDMMPFK-NAVSWTSMLCALAKRASI 293
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
G G+W R + + + V N+LI Y C + A + + M +R ++ N + F
Sbjct: 57 GGGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILP-NEFTLPF 115
Query: 292 AVNGFVG-EALEYF----NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+ +A E+ + K GF L + + AG + D R+FD M
Sbjct: 116 LLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEM---- 171
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK---PNEVVLGSLLAACRTKGDIILA 403
V + + +++ Y++AG +A ++ E M + +E L SLL AC +G++
Sbjct: 172 -VDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFG 230
Query: 404 ERLMKYLVDLDPGVDSNYVLLAN----MYAAVG 432
+ + +L+ +D ++LAN MY G
Sbjct: 231 KLVHSHLLVRGCRID---LILANALVDMYGKCG 260
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/458 (36%), Positives = 258/458 (56%), Gaps = 39/458 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT---NPNHITFITLLSGCADFPSQCLFLGA 102
V W++ I R+ +A L F M G +P I + L CA L +G
Sbjct: 305 VTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDH--LRMGE 360
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H L+ K G+ ++ G +LL MYAK G
Sbjct: 361 QLHALLAKSGV-HADLTAGNSLLSMYAKAGL----------------------------- 390
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
I+ A+ +FDEM V+D +S++AL++G+V+ G EEA F++MQ VEPD T++S++
Sbjct: 391 --IDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLI 448
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC+++ L G H V+ + +CN LID+Y++CG I+ +RQVF M R +V
Sbjct: 449 PACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIV 508
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN++I G+ ++G EA F M GF PDGV+F L+ACSH+GL+ +G +F +M
Sbjct: 509 SWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVM 568
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+ Y ++PR+EHY C+VDL SR G L++A +++MP++ + V +LL ACR +I L
Sbjct: 569 RHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDL 628
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
+++ + + +L P N+VLL+N+Y+A G++D A ++R K +G +K PG S IEI
Sbjct: 629 GKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEING 688
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F+ GD+SH +S IY L+ + +K GY P+T
Sbjct: 689 SLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDT 726
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 182/464 (39%), Gaps = 122/464 (26%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ RM H PN+ TF L C+ G IH GL + ++ V TALLDM
Sbjct: 113 YRRMLRHRVAPNNYTFPFALKACSALADH--HCGRAIHRHAIHAGL-QADLFVSTALLDM 169
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y ++ + A +F MP RD ++W A+L
Sbjct: 170 Y-------------------------------VKCACLPDAAHIFATMPARDLVAWNAML 198
Query: 188 NGFVKRGYFEEALECF--REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL--- 242
G+ G + A+ +MQ+ + P+ T++++L A G L G +H Y +
Sbjct: 199 AGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRAC 258
Query: 243 -------KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
K D V + L+D+Y++CG + +AR+VF M R V+W+++I GF +
Sbjct: 259 LHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCS 318
Query: 296 FVGEALEYFNSMQKEG---FKPDGVSFTGALTAC-------------------------- 326
+ +A F +M +G P S AL AC
Sbjct: 319 RMTQAFLLFKAMLAQGLCFLSP--TSIASALRACASLDHLRMGEQLHALLAKSGVHADLT 376
Query: 327 ---------SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
+ AGLI+ + FD M VS Y +V Y + GR E+A V +
Sbjct: 377 AGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS-----YSALVSGYVQNGRAEEAFLVFKK 431
Query: 378 MP---MKPNEVVLGSLLAACR----------TKGDIILAERLMKYLVDLDPGVDSNYVL- 423
M ++P+ + SL+ AC + G +I+ G+ S +
Sbjct: 432 MQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR------------GLASETSIC 479
Query: 424 --LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
L +MYA G+ D + ++ M R I +++ G GIH
Sbjct: 480 NALIDMYAKCGRIDLSRQVFNMMPSRDIVS---WNTMIAGYGIH 520
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 20/263 (7%)
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA--LECFREMQISGVEPDYV 216
++ G + A +FD++P D ++ L+ + A L +R M V P+
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T L AC+ + G IHR+ + + ++ V L+D+Y +C C+ A +F M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE--GFKPDGVSFTGALTACSHAGLIED 334
R LV+WN+++ G+A +G A+ + SMQ + +P+ + L + G +
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 335 G--LRYFDIMKKIY-------RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
G + + I ++ +++ + ++D+Y++ G L A V + MP + NEV
Sbjct: 247 GTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEV 305
Query: 386 VLGSLLAACRTKGDIILAERLMK 408
+L+ G +L R+ +
Sbjct: 306 TWSALI------GGFVLCSRMTQ 322
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/459 (34%), Positives = 258/459 (56%), Gaps = 10/459 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + + + +SG +A + + G N +F LL+ C L L
Sbjct: 148 VVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKE--LELSKQA 205
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG V G +N+++ +++LD YAK M A +FD M ++ W M+ GY + GD
Sbjct: 206 HGQVLVAGF-LSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGD 264
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E+A +FD MP ++ ++WT+L+ G+ + +ALE F +M + PD T S L A
Sbjct: 265 VEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCA 324
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVS 283
A++ +L G IH Y+++ + + N V ++LID+YS+CGC+E R VF M K +V
Sbjct: 325 SASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVL 384
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN+II A +G EA++ F+ M + G KPD ++ L ACSH+GL+++GLR ++ +
Sbjct: 385 WNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESIT 444
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ V P EHY C++DL RAG + +N +E MP KPN+ + +LL CR G+I
Sbjct: 445 SCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFG 504
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
+ + +++LDP + YVLL++++AAVG+W+ +R+ M R ++K +S IEI +
Sbjct: 505 REVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENVRQLMNERHVRKDRAISWIEIENK 564
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
+H F A DR H E IY L+ +L G++ E ++
Sbjct: 565 VHSFTASDRLHPLKEVIYLALK------QLAGHMEEVLS 597
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 197/445 (44%), Gaps = 71/445 (15%)
Query: 59 GRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNV 118
G++ +A ++ +G T LL CA+ ++ L LG +H + GL R N
Sbjct: 29 GQLFQAISSLGLLSRNGIRLPSKTLAYLLQQCAN--TKSLKLGKWVHLHLKVTGLKRPNT 86
Query: 119 MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR 178
+ L++MY+K G A VFD M ++ ++WN M+ GY + G I+ A ++FD+MP +
Sbjct: 87 FLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEK 146
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIH 238
D +SW ++ + K G+ +AL +RE++ G+ + + +LN C V L + H
Sbjct: 147 DVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAH 206
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRC-------------------------------GCIE 267
VL F N+ + ++++D Y++C G +E
Sbjct: 207 GQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVE 266
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
AR++F M ++ V+W S+I G+A + +ALE F M +PD +F+ L A +
Sbjct: 267 AARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASA 326
Query: 328 ------HAGLIEDGLRYFDIMKKIYRVSPRIEHY---GC--------------------- 357
H I L +I VS I+ Y GC
Sbjct: 327 SIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWN 386
Query: 358 -IVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
I+ ++ GR ++A+ + ++M MKP+ + L LL AC G + RL + +
Sbjct: 387 TIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESITSC 446
Query: 414 DPGVDSN---YVLLANMYAAVGKWD 435
GV N Y L ++ G +D
Sbjct: 447 H-GVIPNQEHYACLIDLLGRAGHFD 470
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 15/185 (8%)
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK-DNVK 251
+G +A+ + +G+ T+ +L CAN +L +G W+H ++ K N
Sbjct: 28 QGQLFQAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTF 87
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
+ N LI++YS+CG A +VF M R L SWN ++ G+A G + A + F+ M ++
Sbjct: 88 LANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEK- 146
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
D VS+ + A + +G D LR++ ++++ G + YS AG L
Sbjct: 147 ---DVVSWNTMVIAYAKSGFCNDALRFYRELRRL----------GIGYNEYSFAGLLNIC 193
Query: 372 LNVVE 376
+ V E
Sbjct: 194 VKVKE 198
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 256/473 (54%), Gaps = 39/473 (8%)
Query: 64 AALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTA 123
A F M G P+ +T+ +L A S LG IH ++ + G++ ++ V +
Sbjct: 163 AIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFST--ELGMAIHCMILRCGIELDS-FVRVS 219
Query: 124 LLDMYAKF------------------------------------GRMDLATVVFDAMRVK 147
L+DMY K G M A +F AM K
Sbjct: 220 LVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKK 279
Query: 148 SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ 207
+ +W+ +IDG+ + GD++ A+ +FD+MP ++ +SWT +++GF + G E+AL F +M
Sbjct: 280 ENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKML 339
Query: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267
GV P+ TI+S L+ACA +G L GL IH+Y+ + L+D+Y++CG IE
Sbjct: 340 EEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIE 399
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
A +VF ++++ +W +I G+A++G +A+ F M G KPD V F LTAC
Sbjct: 400 SASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACM 459
Query: 328 HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
H+G ++ GL +FD M+ Y + P ++HY IVD+ R+G+L++AL +E MPM P+ V+
Sbjct: 460 HSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIW 519
Query: 388 GSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447
G+L ACR +A+ + L+ L+P NY+ L+N YAA+G+W+ A ++R M+ R
Sbjct: 520 GALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNR 579
Query: 448 GIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
G+ K G S IE+ +H F++GD H +S+ I LE + GY+P T
Sbjct: 580 GVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICLKLEEIMAGAVKQGYIPGT 632
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 35/232 (15%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ + R+G +A F++M G PN T ++ LS CA L G IH
Sbjct: 313 VSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGG--LEAGLRIH 370
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ GL + GTAL+DMYAK G ++ A+ VF KS TW MI G+ G
Sbjct: 371 KYIKDNGLHLTEAL-GTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHG-- 427
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ E+A+ CF++M +G++PD V +++L AC
Sbjct: 428 -----------------------------HSEQAIACFKQMMFAGIKPDEVVFLALLTAC 458
Query: 226 ANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+ G + IGL + L + ++K ++D+ R G ++ A + +RM
Sbjct: 459 MHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERM 510
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 145/304 (47%), Gaps = 22/304 (7%)
Query: 148 SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ 207
SS +I R I ++ +F+ ++ ++ AL+ G +F A+ FR M
Sbjct: 112 SSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLML 171
Query: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267
SG++PD +T VL + A + + +G+ IH +L+ + + V +L+D+Y + +
Sbjct: 172 RSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLG 231
Query: 268 FARQVFQRMHKR-----TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
A +VF +R + + WN +I G G + +A++ F +M K+ + VS++
Sbjct: 232 SAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKK----ENVSWSTL 287
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM---P 379
+ + G ++ + FD M + VS + +VD +SR G E AL++ M
Sbjct: 288 IDGFAKNGDMDRAMELFDQMPEKNVVS-----WTTMVDGFSRNGDSEKALSMFSKMLEEG 342
Query: 380 MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDG 436
++PN + S L+AC G + R+ KY+ D G+ L L +MYA G +
Sbjct: 343 VRPNAFTIVSALSACAKIGGLEAGLRIHKYIK--DNGLHLTEALGTALVDMYAKCGNIES 400
Query: 437 AGKI 440
A ++
Sbjct: 401 ASEV 404
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 12/219 (5%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
IH ++ + + + LI S I + VF + L ++N++I G N
Sbjct: 100 IHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSH 159
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY- 355
A+ +F M + G KPD +++ L S AGL L I I R ++ +
Sbjct: 160 FFNAIFHFRLMLRSGIKPDRLTYPFVLK--SMAGLFSTELG-MAIHCMILRCGIELDSFV 216
Query: 356 -GCIVDLYSRAGRLEDALNVVENMPMK----PNEVVLGSLLAACRTKGDIILAERLMKYL 410
+VD+Y + +L A V + P + + ++ L+ C G + A +L K +
Sbjct: 217 RVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAM 276
Query: 411 VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+ + ++ L + +A G D A ++ M + +
Sbjct: 277 PKKE---NVSWSTLIDGFAKNGDMDRAMELFDQMPEKNV 312
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 158/415 (38%), Positives = 253/415 (60%), Gaps = 6/415 (1%)
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
G P+H+T+ L + + LG IHG V K G + + V +L+ MY G +
Sbjct: 5 GIYPDHLTYPFLAKATSRLLRK--ELGVSIHGHVIKSGFEIDR-FVANSLIHMYGSCGDI 61
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
A VFD VK+ +WN+M+DGY + G ++ A +FD MP RD SW+ L++G+ K G
Sbjct: 62 VYARKVFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSG 121
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
+ +A+ F +M+ SG + + VT++SVL ACA++G L G +H+Y++ F+ N+ +
Sbjct: 122 NYGDAMAVFEKMRTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLRT 181
Query: 255 TLIDLYSRCGCIEFARQVFQ--RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
+LID+Y++CG +E A VF+ + K ++ WN++I G A +G V E+L+ + MQ G
Sbjct: 182 SLIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQIAGI 241
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
KPD ++F L+AC+H GL++ F+ + K ++P+ EHY C+VD+ +RAG++ +A
Sbjct: 242 KPDEITFLCLLSACAHGGLVKQASYVFEGLGK-NGMTPKTEHYACMVDVMARAGQVAEAY 300
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
+ MP++P +LG+LL+ C G + LAE + K L++LDP D YV L+N+YA
Sbjct: 301 QFLCQMPLEPTASMLGALLSGCMNHGKLDLAELIGKKLIELDPEHDGRYVGLSNVYAIGR 360
Query: 433 KWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
+WD A +R M+ RG++K PG S +E+ H F+A D+SH SE IY+ML +
Sbjct: 361 RWDEARIMREAMERRGVKKTPGYSFLEMSGAHHRFIAHDKSHPSSEQIYTMLSFI 415
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 36/231 (15%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W+ I + +SG +A F +M G N +T +++L CA + L G M+H
Sbjct: 110 WSCLIDGYAKSGNYGDAMAVFEKMRTSGPKANEVTMVSVLCACAHLGA--LDKGRMMHQY 167
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS--FTWNAMIDGYMRRGDI 165
+ G + N V+ T+L+DMYAK G ++ A VF + ++ S WNAMI G
Sbjct: 168 LVDNGFELNLVLR-TSLIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGG------- 219
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
G +E+L+ + EMQI+G++PD +T + +L+AC
Sbjct: 220 ------------------------LATHGLVKESLDLYTEMQIAGIKPDEITFLCLLSAC 255
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
A+ G + ++ + K + ++D+ +R G + A Q +M
Sbjct: 256 AHGGLVKQASYVFEGLGKNGMTPKTEHYACMVDVMARAGQVAEAYQFLCQM 306
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 158/459 (34%), Positives = 265/459 (57%), Gaps = 7/459 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I+ +C G A F+ M + P+ T ++LS CA+ + L LG I
Sbjct: 243 VSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACAN--RESLKLGKQI 300
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS--SFTWNAMIDGYMRR 162
H + + +D VG AL+ MYAK G +++A + + S + +++DGY +
Sbjct: 301 HAHIVRADVDIAGA-VGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKI 359
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GDI+ A +FD + RD ++WTA++ G+ + G +AL FR M G +P+ T+ +VL
Sbjct: 360 GDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVL 419
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTL 281
+ +++ +L G +H ++ + +V V N LI +YSR G I+ AR++F + R
Sbjct: 420 SVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDT 479
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
++W S+I+ A +G EA+E F M + KPD +++ G L+AC+H GL+E G YF++
Sbjct: 480 LTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNL 539
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
MK ++ + P HY C++DL RAG LE+A N + NMP++P+ V GSLL++CR +
Sbjct: 540 MKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVD 599
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LA+ + L+ +DP Y+ LAN +A GKW+ A K+R++MK + ++K+ G S ++I
Sbjct: 600 LAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIK 659
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ +H F D H + + IY M+ + ++K G++P+T
Sbjct: 660 NKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDT 698
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 206/415 (49%), Gaps = 56/415 (13%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V WT+ I + G A F RM G +P TF +L+ CA +Q L +G +
Sbjct: 110 SVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCA--AAQALDVGKKV 167
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V KLG V V +LL+MYAK G +A VVFD MR+K + TWN MI +M+
Sbjct: 168 HSFVVKLG-QSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQ 226
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLN 223
+ A+ +FD+M D +SW +++ G+ +GY ALE F M + S ++PD T+ SVL+
Sbjct: 227 FDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLS 286
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF--------------- 268
ACAN +L +G IH ++++ D V N LI +Y++ G +E
Sbjct: 287 ACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNV 346
Query: 269 ------------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
AR +F + R +V+W ++IVG+A NG + +AL F M +E
Sbjct: 347 IAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIRE 406
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCI------VDLYSR 364
G KP+ + L+ S ++ G K+++ V+ R+E + + +YSR
Sbjct: 407 GPKPNNYTLAAVLSVISSLASLDHG-------KQLHAVAIRLEEVSSVSVGNALITMYSR 459
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG----DIILAERLMKYLVDLDP 415
+G ++DA + ++ + + S++ + G I L E++++ ++L P
Sbjct: 460 SGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLR--INLKP 512
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 170/352 (48%), Gaps = 40/352 (11%)
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
F+G IH + K GL V + LL++Y K G A +FD M +K++F+WN ++
Sbjct: 29 FIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSA 88
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+ + G+++SA R+FDE+P D++SWT ++ G+ G F+ A+ F M SG+ P T
Sbjct: 89 HAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTF 148
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+VL +CA L +G +H +V+K V V N+L+++Y++CG A+ VF RM
Sbjct: 149 TNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRL 208
Query: 279 R-------------------------------TLVSWNSIIVGFAVNGFVGEALEYFNSM 307
+ +VSWNSII G+ G+ ALE F+ M
Sbjct: 209 KDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFM 268
Query: 308 QK-EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSR 364
K KPD + L+AC++ ++ G + I I R I ++ +Y++
Sbjct: 269 LKSSSLKPDKFTLGSVLSACANRESLKLGKQ---IHAHIVRADVDIAGAVGNALISMYAK 325
Query: 365 AGRLEDALNVVENMPMKP--NEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
+G +E A +VE + P N + SLL GDI A + L D
Sbjct: 326 SGAVEVAHRIVE-ITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRD 376
>gi|125528323|gb|EAY76437.1| hypothetical protein OsI_04370 [Oryza sativa Indica Group]
Length = 456
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/441 (38%), Positives = 251/441 (56%), Gaps = 3/441 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V T++I RSGR +A F+ + G PN TF T+L + L +GA +
Sbjct: 6 VVSATAAIGALTRSGRHRDAVALFSGILGDGIVPNEFTFGTILQSASALRD--LRVGAQL 63
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V KLGL +NV VG+AL+D YAK G + A R + ++ A+I G+++ G
Sbjct: 64 HACVAKLGLC-SNVFVGSALVDHYAKMGSVREAQGALQDTREPNVVSYTALIAGFLKNGM 122
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A R+F MP R+ ISW A++ G K G EEA+ F EM GV P+ T +L +
Sbjct: 123 SGDAARLFRCMPERNVISWNAMIGGSSKAGLNEEAVNLFLEMCREGVRPNESTFPCLLTS 182
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
AN G LG+G IH +K K +V N+L+ Y+RCG ++ + F+++ + +VSW
Sbjct: 183 VANAGALGVGRSIHASAIKFLGKLDVFAGNSLVSFYARCGSLDDSVLAFKKIKNKNVVSW 242
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G+A NG EAL+ F M+ G KPD V+ G L C+HAGL+++G F +
Sbjct: 243 NALICGYAQNGRGEEALDAFRRMKATGLKPDRVTLLGLLFGCNHAGLVDEGYSLFRTAEM 302
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
R EHY C+VDL+SRA R +DA +EN+P +P V SL+ C+ + LA+
Sbjct: 303 EQPGVLRPEHYACVVDLFSRAKRFDDAKRFLENLPFEPGIVFWKSLIGGCQIHWNRELAK 362
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ K++ LDP S+Y+LL+N+Y+A G W IRR +K +G+++ G S IE+ + +
Sbjct: 363 SVAKHIHALDPKDTSSYILLSNVYSAAGSWQDVSMIRREIKEKGLKRITGCSWIEVQNQV 422
Query: 465 HEFMAGDRSHIESEHIYSMLE 485
H F GDR H +S+ IY MLE
Sbjct: 423 HVFFNGDRRHPKSDDIYMMLE 443
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 136/332 (40%), Gaps = 66/332 (19%)
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
MP RD +S TA + + G +A+ F + G+ P+ T ++L + + + L +G
Sbjct: 1 MPHRDVVSATAAIGALTRSGRHRDAVALFSGILGDGIVPNEFTFGTILQSASALRDLRVG 60
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR------------------------ 270
+H V K NV V + L+D Y++ G + A+
Sbjct: 61 AQLHACVAKLGLCSNVFVGSALVDHYAKMGSVREAQGALQDTREPNVVSYTALIAGFLKN 120
Query: 271 -------QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
++F+ M +R ++SWN++I G + G EA+ F M +EG +P+ +F L
Sbjct: 121 GMSGDAARLFRCMPERNVISWNAMIGGSSKAGLNEEAVNLFLEMCREGVRPNESTFPCLL 180
Query: 324 TACSHAGLIEDG----------LRYFDIMKKIYRVS--------------------PRIE 353
T+ ++AG + G L D+ VS +
Sbjct: 181 TSVANAGALGVGRSIHASAIKFLGKLDVFAGNSLVSFYARCGSLDDSVLAFKKIKNKNVV 240
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
+ ++ Y++ GR E+AL+ M +KP+ V L LL C G + L +
Sbjct: 241 SWNALICGYAQNGRGEEALDAFRRMKATGLKPDRVTLLGLLFGCNHAGLVDEGYSLFRTA 300
Query: 411 VDLDPGV--DSNYVLLANMYAAVGKWDGAGKI 440
PGV +Y + ++++ ++D A +
Sbjct: 301 EMEQPGVLRPEHYACVVDLFSRAKRFDDAKRF 332
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 158/459 (34%), Positives = 258/459 (56%), Gaps = 5/459 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + IS + G EA RM G + T+ +++S ++ + +G +
Sbjct: 239 AVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASN--AGLFNIGRQV 296
Query: 105 HGLVCKLGLDRNN---VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
H V + + + + V AL+ +Y + G++ A VFD M VK +WNA++ G +
Sbjct: 297 HAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVN 356
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
IE A +F EMPVR ++WT +++G + G+ EE L+ F +M++ G+EP
Sbjct: 357 ARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGA 416
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
+ +C+ +G+L G +H +++ ++ V N LI +YSRCG +E A VF M
Sbjct: 417 IASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDS 476
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSWN++I A +G +A++ + M KE PD ++F L+ACSHAGL+++G YFD
Sbjct: 477 VSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDT 536
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M+ Y ++P +HY ++DL RAG +A NV E+MP +P + +LLA C G++
Sbjct: 537 MRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNME 596
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
L + L++L P D Y+ L+NMYAA+G+WD ++R+ M+ RG++K+PG S IE+
Sbjct: 597 LGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVE 656
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ +H F+ D H E +Y LE L +++ GYVP+T
Sbjct: 657 NMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDT 695
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 198/429 (46%), Gaps = 58/429 (13%)
Query: 36 NNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLL---SGCAD 92
N + ++ TV + + I+ S A F +M G P+ TF ++L S AD
Sbjct: 86 NATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIAD 145
Query: 93 FPSQCLFLGAMIHGLVCKLG-LDRNNVMVGTALLDMYAKFGRMDL--ATVVFDAMRV--- 146
+ C +H V K G L +V+ AL+ Y L + V+ A R
Sbjct: 146 EETHC----QQLHCEVFKWGALSVPSVL--NALMSCYVSCASSPLVNSCVLMAAARKLFD 199
Query: 147 ------KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEAL 200
+ W +I GY+R D+ +A + + M A++W A+++G+V RG++EEA
Sbjct: 200 EAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAF 259
Query: 201 ECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN----VKVCNTL 256
+ R M G++ D T SV++A +N G IG +H YVL+ + + + V N L
Sbjct: 260 DLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNAL 319
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSI----------------------------- 287
I LY+RCG + AR+VF +M + LVSWN+I
Sbjct: 320 ITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWT 379
Query: 288 --IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
I G A NGF E L+ FN M+ EG +P ++ GA+ +CS G +++G + + ++
Sbjct: 380 VMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQL 439
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
S + ++ +YSR G +E A V MP + V +++AA G + A +
Sbjct: 440 GHDS-SLSVGNALITMYSRCGLVEAADTVFLTMPYV-DSVSWNAMIAALAQHGHGVQAIQ 497
Query: 406 LMKYLVDLD 414
L + ++ D
Sbjct: 498 LYEKMLKED 506
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 132/319 (41%), Gaps = 49/319 (15%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP--VRDAI 181
L+D Y K + A +FD + M+ Y G+I+ A ++F+ P +RD +
Sbjct: 37 LIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTV 96
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL-WIHRY 240
S+ A++ F AL+ F +M+ G PD T SVL A + + +H
Sbjct: 97 SYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCE 156
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCG-------CIEF------------------------- 268
V K V N L+ Y C C+
Sbjct: 157 VFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIA 216
Query: 269 ----------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
AR++ + M V+WN++I G+ GF EA + M G + D +
Sbjct: 217 GYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYT 276
Query: 319 FTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPR--IEHYGCIVDLYSRAGRLEDALNVV 375
+T ++A S+AGL G + + +++ + + S + ++ LY+R G+L +A V
Sbjct: 277 YTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVF 336
Query: 376 ENMPMKPNEVVLGSLLAAC 394
+ MP+K + V ++L+ C
Sbjct: 337 DKMPVK-DLVSWNAILSGC 354
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H ++L FK + N LID Y + I +AR +F ++ K +V+ +++ ++ G
Sbjct: 18 VHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAGN 77
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+ A + FN+ D VS+ +TA SH+ L+ F MK++
Sbjct: 78 IKLAHQLFNATPMS--IRDTVSYNAMITAFSHSHDGHAALQLFVQMKRL 124
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 152/386 (39%), Positives = 239/386 (61%), Gaps = 5/386 (1%)
Query: 119 MVGTALLDMYAKFGRMDLAT-VVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV 177
+V +LL +Y G +D A V++ +WN M+ GY + GD+ +A +F MP
Sbjct: 114 VVTNSLLKLYCSLGLLDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAREVFARMPE 173
Query: 178 RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWI 237
R+ +SW+A+++ V+ G F EAL F M PD V ++SVL ACA++G + G W+
Sbjct: 174 RNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWV 233
Query: 238 HRYVLKQDF---KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
HRY+ F + N+ + L+D+Y +CGC+E A QVF +H+R +V WN++I G A+N
Sbjct: 234 HRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMN 293
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
G+ ALE F M ++GF P+ +F L AC+H G +++G R F M+ Y + P+ EH
Sbjct: 294 GYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQD-YGIKPQREH 352
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
YGC+ DL RAG +E+A ++ +MPM+P+ G+L+++C+ DI + ER+ K L++L+
Sbjct: 353 YGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELE 412
Query: 415 PGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSH 474
P YV+L N+YA G+W+ A IR+ M+ RG +K+ GLS IE+ +HEF++GD H
Sbjct: 413 PYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRH 472
Query: 475 IESEHIYSMLELLSFDLKLCGYVPET 500
+ IY++LE + L+L GYV +T
Sbjct: 473 PLTRKIYALLEDIERRLQLIGYVKDT 498
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 95/233 (40%), Gaps = 35/233 (15%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ + R+G EA F RM P+ + +++L CA + + G +H
Sbjct: 177 VSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGA--VERGRWVH 234
Query: 106 GLV--CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+ G R N+M+ TAL+DMY K G M+ A VFD + + WNAMI
Sbjct: 235 RYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMI------- 287
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
G GY E ALE FR M G P+ T I+VL
Sbjct: 288 ------------------------GGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLC 323
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
AC + G + G + + + K + L DL R G +E A + M
Sbjct: 324 ACTHTGRVDEGKRVFKSMQDYGIKPQREHYGCLADLLGRAGNVEEAEALLLDM 376
>gi|125539857|gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 152/386 (39%), Positives = 239/386 (61%), Gaps = 5/386 (1%)
Query: 119 MVGTALLDMYAKFGRMDLAT-VVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV 177
+V +LL +Y G +D A V++ +WN M+ GY + GD+ +A +F MP
Sbjct: 114 VVTNSLLKLYCSLGLIDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAREVFARMPE 173
Query: 178 RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWI 237
R+ +SW+A+++ V+ G F EAL F M PD V ++SVL ACA++G + G W+
Sbjct: 174 RNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWV 233
Query: 238 HRYVLKQDF---KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
HRY+ F + N+ + L+D+Y +CGC+E A QVF +H+R +V WN++I G A+N
Sbjct: 234 HRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMN 293
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
G+ ALE F M ++GF P+ +F L AC+H G +++G R F M+ Y + P+ EH
Sbjct: 294 GYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQD-YGIKPQREH 352
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
YGC+ DL RAG +E+A ++ +MPM+P+ G+L+++C+ DI + ER+ K L++L+
Sbjct: 353 YGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELE 412
Query: 415 PGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSH 474
P YV+L N+YA G+W+ A IR+ M+ RG +K+ GLS IE+ +HEF++GD H
Sbjct: 413 PYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRH 472
Query: 475 IESEHIYSMLELLSFDLKLCGYVPET 500
+ IY++LE + L+L GYV +T
Sbjct: 473 PLTRKIYALLEDIERRLQLIGYVKDT 498
>gi|147810325|emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
Length = 805
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 249/444 (56%), Gaps = 6/444 (1%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
+ S I + S A L + M +G N+ TF L+ C S +G ++H
Sbjct: 352 YNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKACTTLGSSSKLIGCLVHAH 411
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V G D + +V +AL++ Y+ M A +FD + + W AMIDGY + GD+E
Sbjct: 412 VVTFGFDEDPFVV-SALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDGYGKMGDVEH 470
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +F++MP R+AISW+A++ + + G F+E L FR MQ +G P+ ++SVL ACA+
Sbjct: 471 ARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVSVLTACAH 530
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G L GLW+H Y + +F N + L+D+YS+CGC+E A FQ + + +WN++
Sbjct: 531 LGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKDAGAWNAM 590
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G A+NG ++LE FN M G +P +F LTAC+HA L+ +GL+ F+ M Y
Sbjct: 591 ISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVREGLKLFEQMSSNYG 650
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAE 404
V P+ EHY C+VDL +RAG L +A +E + + V G+ L ACRT G+I +
Sbjct: 651 VEPQXEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAXLGACRTYGNIEVGN 710
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWD-GAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
R+ K L D+ +VL N+Y G WD A ++RR + G++KKPG S IE+
Sbjct: 711 RVWKKLADMGVADCGTHVLSYNLYREAG-WDMEAKRVRRLISEXGMKKKPGCSIIEVDGT 769
Query: 464 IHEFMAGDRSHIESEHIYSMLELL 487
+ EF+AGD SH ++ I L+ L
Sbjct: 770 VEEFLAGDLSHSQAPQICKTLDSL 793
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 36/241 (14%)
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG-- 232
+ +R+ + +++ G+V A+ C+ +M G+ + T ++ AC +G+
Sbjct: 344 LSLRNIFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKACTTLGSSSKL 403
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYS------------------------------- 261
IG +H +V+ F ++ V + LI+ YS
Sbjct: 404 IGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDGYG 463
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
+ G +E AR +F+ M +R +SW++++ ++ G E L F MQ+ G P+
Sbjct: 464 KMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVS 523
Query: 322 ALTACSHAGLIEDGLRYFDIMKKI-YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM 380
LTAC+H G + GL K+ + +P + +VD+YS+ G +E AL+ + +P
Sbjct: 524 VLTACAHLGALAQGLWVHSYAKQCNFDSNPILAT--ALVDMYSKCGCVESALSTFQGIPN 581
Query: 381 K 381
K
Sbjct: 582 K 582
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 8/192 (4%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W++ ++ + R G E F RM GT PN +++L+ CA + L G +
Sbjct: 483 AISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVSVLTACAHLGA--LAQGLWV 540
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + D N ++ TAL+DMY+K G ++ A F + K + WNAMI G GD
Sbjct: 541 HSYAKQCNFDSNPILA-TALVDMYSKCGCVESALSTFQGIPNKDAGAWNAMISGVAMNGD 599
Query: 165 IESAVRMFDEMPVRDA----ISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTII 219
++ +F++M ++ A+L E L+ F +M + GVEP
Sbjct: 600 AWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVREGLKLFEQMSSNYGVEPQXEHYA 659
Query: 220 SVLNACANVGTL 231
+++ A G L
Sbjct: 660 CLVDLMARAGML 671
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 260/448 (58%), Gaps = 10/448 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAA---LEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V W + + + + G EA +F R+ + N +F +L C L L
Sbjct: 160 VVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDM---GFNAFSFAGVLILCVKLKE--LQLA 214
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+HG V G +N+++ ++++D YAK G M A +FD M VK W ++ GY +
Sbjct: 215 KQVHGQVLVAGF-LSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAK 273
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
GD+ SA +F +MP ++ +SW+AL++G+ + EAL+ F +M G+ P+ T S
Sbjct: 274 WGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSC 333
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRT 280
L ACA++ L G +H Y+++ F+ N V ++LID+YS+CG +E + VF M +K+
Sbjct: 334 LCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQD 393
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+V WN++I A NG +A++ FN M + G KPD ++F L+ACSH+GL+++GLR+F
Sbjct: 394 VVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFK 453
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + V P EHY C++DL RAG + +N +ENM KP++ V +LL CR +I
Sbjct: 454 AMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNI 513
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L ++ + +++L P + YV LA++YA +GKW+ K+R M + I+K+ G+S I++
Sbjct: 514 ELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDV 573
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLS 488
G+ H F+A DR H E IY +LE L+
Sbjct: 574 GNKTHSFIASDRLHPLKEEIYLLLEQLA 601
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 190/425 (44%), Gaps = 46/425 (10%)
Query: 29 PQISIQTNNSKSTVNPTVQWTSSISRHC---------RSGRIAEAALEFTRMTLHGTNPN 79
P S Q + ++ P + + C GR+ EA R+ G
Sbjct: 2 PSFSSQAFKTPASFGPKSKQRPDSTSLCIAQSLLDLSSQGRLPEALSYLDRLAQRGVRLP 61
Query: 80 HITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATV 139
F+ LL CA ++ G +H + G R +V L+ MY + GR A
Sbjct: 62 TGIFVDLLRLCA--KAKYFKGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARK 119
Query: 140 VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
VFD M V++ ++WN M+ GY + GD+ +A ++FD M +D +SW ++ + K+G F EA
Sbjct: 120 VFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEA 179
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDL 259
+ +R+ + + + + VL C + L + +H VL F N+ + ++++D
Sbjct: 180 IGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDA 239
Query: 260 YSRCGCIEFAR-------------------------------QVFQRMHKRTLVSWNSII 288
Y++CG + AR ++F +M ++ VSW+++I
Sbjct: 240 YAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALI 299
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
G+A N EAL+YF M K G P+ +F+ L AC+ ++ G + + + Y
Sbjct: 300 SGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFR 359
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
I ++D+YS+ G LE + V M K + VV ++++A G E+ M+
Sbjct: 360 CNTIV-VSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGH---GEKAMQ 415
Query: 409 YLVDL 413
D+
Sbjct: 416 MFNDM 420
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 162/433 (37%), Positives = 247/433 (57%), Gaps = 35/433 (8%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F RM G P+ TF++LL CA ++ G HG+ K G + + T L++M
Sbjct: 126 FVRMMEEGVAPDTYTFVSLLKACAS--ARAGEEGRQAHGVAVKAGAAEHEYVAPT-LINM 182
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YA+ G D+ +A MFD M +S+ A++
Sbjct: 183 YAECG-------------------------------DVRAARVMFDRMDGECVVSYNAMI 211
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
V+ EAL FREMQ G++P VT+ISVL+ACA +G L +G WIH Y+ K
Sbjct: 212 TASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLD 271
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
VKV LID+Y++CG +E A VFQ M R +W+ ++V +A +G+ EA+ F M
Sbjct: 272 SLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEM 331
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+K+G KPD V+F G L ACSH+G++ +GL+YFD M++ Y + I+HYGC+ DL +R+G+
Sbjct: 332 KKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMRE-YGIVSGIKHYGCVTDLLARSGQ 390
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
LE A ++ +P+KP ++ +LL+AC GD+ + +R+ + +++LD +YV+ +N+
Sbjct: 391 LERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNL 450
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
A G+W+ +R+ M +G+ K PG SSIEI + +HEF AGD SH S+ M++ +
Sbjct: 451 CANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEV 510
Query: 488 SFDLKLCGYVPET 500
LKL GYVP T
Sbjct: 511 IEQLKLVGYVPNT 523
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 112/253 (44%), Gaps = 35/253 (13%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + I+ RS EA + F M G P +T I++LS CA + L LG IH
Sbjct: 205 VSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGA--LELGRWIH 262
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K+ LD + V V TAL+DMYAK G ++ A VF M + W+ M+ Y G
Sbjct: 263 DYIRKMRLD-SLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHG-- 319
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
Y EA+ F EM+ G++PD VT + VL AC
Sbjct: 320 -----------------------------YGREAISMFEEMKKQGMKPDDVTFLGVLYAC 350
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSW 284
++ G + GL + + +K + DL +R G +E A + + K T + W
Sbjct: 351 SHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILW 410
Query: 285 NSIIVGFAVNGFV 297
+++ A +G V
Sbjct: 411 RTLLSACAGHGDV 423
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 257/454 (56%), Gaps = 11/454 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
++ WT+ I+ + R G++ EA +M + ++ +F I
Sbjct: 295 SISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISI 354
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+VC N ++ G Y++ GRMD A +F M K +WN M+ Y + G
Sbjct: 355 RDVVC-----WNTMIAG------YSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQ 403
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+++A+++F+EM ++ +SW +L++G + G + +AL+ F M G +PD T L++
Sbjct: 404 MDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSS 463
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++ L +G +H+ V+K + ++ V N LI +Y++CG I A +F+ + +VSW
Sbjct: 464 CAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSW 523
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
NS+I +A+NG EAL+ F+ M+ EG PD V+F G L+ACSH GLI+ GL+ F M +
Sbjct: 524 NSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQ 583
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P EHY C+VDL RAGRLE+A +V M + N + G+LL ACR G++ LA+
Sbjct: 584 AYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAK 643
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ L++ +P SNYVLL+NM A G+WD ++RR MK +G +K+PG S IE+ + +
Sbjct: 644 FAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRV 703
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
H F++ D +H + + +L L+ ++ P
Sbjct: 704 HAFLSEDPAHPRAVELCHILRSLTAHMRNTAKCP 737
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 181/388 (46%), Gaps = 60/388 (15%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
N + +L +A+FG++ A +FD M +++ WNAMI Y++ ++ A+ +F EMP
Sbjct: 232 NTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMP 291
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI------------------ 218
+++ISWT ++NG+V+ G +EA + +M V I
Sbjct: 292 EKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQ 351
Query: 219 ISVLN-ACANVGTLGIG----LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
IS+ + C N G + ++ KQ K ++ NT++ Y++ G ++ A ++F
Sbjct: 352 ISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIF 411
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
+ M ++ +VSWNS+I G NG +AL+ F M EG KPD +F L++C+H ++
Sbjct: 412 EEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQ 471
Query: 334 DGLRYFD-IMKKIYRVS------------------------PRIEHYGCI-----VDLYS 363
G + +MK Y I+H+ + + Y+
Sbjct: 472 VGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYA 531
Query: 364 RAGRLEDALNVVENMPMK---PNEVVLGSLLAACRTKGDIILAERLMKYLV---DLDPGV 417
G +AL + M ++ P+EV +L+AC G I +L K +V +++P +
Sbjct: 532 LNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEP-L 590
Query: 418 DSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+Y + ++ G+ + A ++ R MK
Sbjct: 591 AEHYACMVDLLGRAGRLEEAFQLVRGMK 618
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 179/404 (44%), Gaps = 62/404 (15%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ + + R+ EA F +M + TL+ C + + +
Sbjct: 78 VSWNSMIAAYLHNDRVEEARQLFDKMPTRD-----LYSWTLMITCYTRNGELAKARNLFN 132
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L K N + A++ YAK + D A +FDAM K +WN+M+ GY R G++
Sbjct: 133 LLPYKW-----NPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEM 187
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
++ F+EM RD +SW +++GFV+ G + E F ++ P+ V+ +++L C
Sbjct: 188 RLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIP----NPNTVSWVTML--C 241
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++R G I AR++F +M R +V+WN
Sbjct: 242 G---------------------------------FARFGKIAEARRLFDQMPIRNVVAWN 268
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I + N V EA+ F M ++ + +S+T + G +++ + + M
Sbjct: 269 AMIAAYVQNCHVDEAISLFMEMPEK----NSISWTTVINGYVRMGKLDEARQLLNQMP-- 322
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
YR + ++ Y + R++DA + + ++ + V +++A G + A
Sbjct: 323 YR---NVAAQTAMISGYVQNKRMDDARQIFNQISIR-DVVCWNTMIAGYSQCGRMDEALH 378
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
L K +V D + S ++A+ YA VG+ D A KI MK + I
Sbjct: 379 LFKQMVKKD--IVSWNTMVAS-YAQVGQMDAAIKIFEEMKEKNI 419
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 149/345 (43%), Gaps = 51/345 (14%)
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
+ N + +++ +AK GR+ A +FD M ++ +WN+MI Y+ +E A ++F
Sbjct: 41 MTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLF 100
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
D+MP RD SWT ++ + + G +A F +
Sbjct: 101 DKMPTRDLYSWTLMITCYTRNGELAKARNLFNLL-------------------------- 134
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
+K N CN ++ Y++ + AR++F M + LVSWNS++ G+
Sbjct: 135 ------------PYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYT 182
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
NG + L++F M + D VS+ + G + +F+ + +P
Sbjct: 183 RNGEMRLGLQFFEEMAER----DVVSWNLMVDGFVEVGDLNSSWEFFEKIP-----NPNT 233
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD 412
+ ++ ++R G++ +A + + MP++ N V +++AA + + + ++
Sbjct: 234 VSWVTMLCGFARFGKIAEARRLFDQMPIR-NVVAWNAMIAAYVQNCHV---DEAISLFME 289
Query: 413 LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
+ ++ + N Y +GK D A ++ M R + + + S
Sbjct: 290 MPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMIS 334
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
F+ N+K+ + G I+ A +VFQ M + V+ NS+I FA NG + +A + F+
Sbjct: 16 FRHNLKITQ-----LGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFD 70
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
M + VS+ + A H +E+ + FD M + + + ++ Y+R
Sbjct: 71 GMPQRNI----VSWNSMIAAYLHNDRVEEARQLFDKMP-----TRDLYSWTLMITCYTRN 121
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
G L A N+ +P K N V +++A A RL
Sbjct: 122 GELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRL 162
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 162/433 (37%), Positives = 247/433 (57%), Gaps = 35/433 (8%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F RM G P+ TF++LL CA ++ G HG+ K G + + T L++M
Sbjct: 126 FVRMMEEGVAPDTYTFVSLLKACAS--ARAGEEGRQAHGVAVKAGAAEHEYVAPT-LINM 182
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YA+ G D+ +A MFD M +S+ A++
Sbjct: 183 YAECG-------------------------------DVRAARVMFDRMDGECVVSYNAMI 211
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
V+ EAL FREMQ G++P VT+ISVL+ACA +G L +G WIH Y+ K
Sbjct: 212 TASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLD 271
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
VKV LID+Y++CG +E A VFQ M R +W+ ++V +A +G+ EA+ F M
Sbjct: 272 SLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEM 331
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+K+G KPD V+F G L ACSH+G++ +GL+YFD M++ Y + I+HYGC+ DL +R+G+
Sbjct: 332 KKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMRE-YGIVSGIKHYGCVTDLLARSGQ 390
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
LE A ++ +P+KP ++ +LL+AC GD+ + +R+ + +++LD +YV+ +N+
Sbjct: 391 LERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNL 450
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
A G+W+ +R+ M +G+ K PG SSIEI + +HEF AGD SH S+ M++ +
Sbjct: 451 CANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEV 510
Query: 488 SFDLKLCGYVPET 500
LKL GYVP T
Sbjct: 511 IEQLKLVGYVPNT 523
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 112/254 (44%), Gaps = 35/254 (13%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V + + I+ RS EA + F M G P +T I++LS CA + L LG I
Sbjct: 204 VVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGA--LELGRWI 261
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K+ LD + V V TAL+DMYAK G ++ A VF M + W+ M+ Y G
Sbjct: 262 HDYIRKMRLD-SLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHG- 319
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
Y EA+ F EM+ G++PD VT + VL A
Sbjct: 320 ------------------------------YGREAISMFEEMKKQGMKPDDVTFLGVLYA 349
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVS 283
C++ G + GL + + +K + DL +R G +E A + + K T +
Sbjct: 350 CSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAIL 409
Query: 284 WNSIIVGFAVNGFV 297
W +++ A +G V
Sbjct: 410 WRTLLSACAGHGDV 423
>gi|357467943|ref|XP_003604256.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505311|gb|AES86453.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 670
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 164/457 (35%), Positives = 255/457 (55%), Gaps = 38/457 (8%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V WT IS + ++G +A F RM + PN TF+++L C CL LG
Sbjct: 247 VRDVVSWTGLISGYMKAGLFNDAVALFLRMDV---APNAATFVSILGACGKL--GCLNLG 301
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHGLV K + ++V L+DMY K
Sbjct: 302 KGIHGLVSKYPHGKE-LVVSNTLMDMYVKCE----------------------------- 331
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+ A R+FDE+P +D +SWT++++G V+ +E+L+ F EM SG EPD V + SV
Sbjct: 332 --SVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSV 389
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L+ACA++G L G W+H Y+ K +V + +LID+Y++CGCIE A+Q+F + + +
Sbjct: 390 LSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNI 449
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+WN+ I G A+NG EAL+ F + + G +P+ ++F +AC H+GL+++G YF
Sbjct: 450 RTWNAYIGGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQ 509
Query: 342 M-KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M Y +SP +EHYGC+VDL RA +E+A+ ++ MPM P+ ++G+LL+A T G++
Sbjct: 510 MTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMELINKMPMPPDVQIIGALLSASSTYGNV 569
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L ++K + + + YVLL+N YA KW +RR MK +GI K PG S I +
Sbjct: 570 ELTPEMLKTVRNFECQESGVYVLLSNWYANNKKWAEVRSVRRLMKEKGISKAPGSSLIRV 629
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV 497
H+F+ GD +H +SE I+ +L +L+ L G++
Sbjct: 630 DGKSHKFVVGDNNHPQSEDIHVLLNILANQTYLEGHI 666
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 127/232 (54%), Gaps = 4/232 (1%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F N+ + Y GD A ++FD MPVRD +SWT L++G++K G F +A+ F M ++
Sbjct: 220 FVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRMDVA 279
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
P+ T +S+L AC +G L +G IH V K + V NTL+D+Y +C + A
Sbjct: 280 ---PNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDA 336
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
+++F + ++ +VSW S+I G E+L+ F M GF+PDGV T L+AC+
Sbjct: 337 KRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASL 396
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
GL++ G R+ R+ + ++D+Y++ G +E A + +P K
Sbjct: 397 GLLDYG-RWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSK 447
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 126/303 (41%), Gaps = 45/303 (14%)
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
+++G+ + A+ +R + +G PD T+ +VL +CA + IH +K D
Sbjct: 155 IISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAVKTD 214
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
++ V N+ + +YS CG A +VF M R +VSW +I G+ G +A+ F
Sbjct: 215 LWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFL 274
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
M P+ +F L AC G + G ++ K Y + ++D+Y +
Sbjct: 275 RMD---VAPNAATFVSILGACGKLGCLNLGKGIHGLVSK-YPHGKELVVSNTLMDMYVKC 330
Query: 366 GRLEDALNVVENMPMK----------------------------------PNEVVLGSLL 391
+ DA + + +P K P+ V+L S+L
Sbjct: 331 ESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVL 390
Query: 392 AACRTKGDIILAERLMKYL----VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447
+AC + G + + +Y+ + D + ++ L +MYA G + A ++ + +
Sbjct: 391 SACASLGLLDYGRWVHEYIDHSRIKWDVHIGTS---LIDMYAKCGCIEMAQQMFNLLPSK 447
Query: 448 GIQ 450
I+
Sbjct: 448 NIR 450
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 164/453 (36%), Positives = 248/453 (54%), Gaps = 33/453 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WT+ IS + R R EA LE RM N F + A CL +G IHG
Sbjct: 170 WTAMISGYVRHDRPNEA-LELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGY 228
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ + GLD + V+ W+A+ D Y + G IE
Sbjct: 229 IMRTGLDSDEVV--------------------------------WSALSDMYGKCGSIEE 256
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +FD+M RD ++WTA+++ + + G +E + F ++ SG+ P+ T VLNACAN
Sbjct: 257 ARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACAN 316
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ +G +H Y+ + F + L+ +YS+CG + A +VF+ + L SW S+
Sbjct: 317 QTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSL 376
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+A NG EA+ YF + K G +PD ++F G L+AC+HAGL++ GL YF +K+ Y
Sbjct: 377 IAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYG 436
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
++ +HY CI+DL +R+G+ ++A N++ M MKP++ + SLL CR G++ LA+R
Sbjct: 437 LTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAA 496
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
+ L +++P + YV LAN+YA G W KIR+TM RG+ KKPGLS I I +H F
Sbjct: 497 EALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVF 556
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ GD SH +S+ I L LS +K G+VP+T
Sbjct: 557 LVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDT 589
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 203/420 (48%), Gaps = 23/420 (5%)
Query: 17 HQQNPNQNLTTTPQISIQTNNSKSTVNPTV----QWTSSISRHCRSGRIAEAALEFTRMT 72
H +P Q P+ ++N +T+ P + ++ +I C+ R+ EA
Sbjct: 12 HSSSPFQ-----PKTFFKSNTKDTTLVPHLCNHKRFDEAIHILCQQNRLKEAL-----QI 61
Query: 73 LHGTN-PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF 131
LH + P+ + TL+ C S+ L G +H + KL + + LL+MYAK
Sbjct: 62 LHQIDKPSASVYSTLIQSC--IKSRLLQQGKKVHQHI-KLSGFVPGLFILNRLLEMYAKC 118
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
+ + +FD M + +WN +I GY + G ++ A +FD+MP RD SWTA+++G+V
Sbjct: 119 DSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYV 178
Query: 192 KRGYFEEALECFREMQIS-GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
+ EALE FR M+ S + + T+ S L A A V L IG IH Y+++ +
Sbjct: 179 RHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDE 238
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
V + L D+Y +CG IE AR +F +M R +V+W ++I + +G E + F + +
Sbjct: 239 VVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRS 298
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
G +P+ +F+G L AC++ E G + M ++ P +V +YS+ G +
Sbjct: 299 GIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRV-GFDPFSFAASALVHMYSKCGNMVS 357
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
A V + P +P+ SL+A G A R + LV G +++ + +A
Sbjct: 358 AERVFKETP-QPDLFSWTSLIAGYAQNGQPDEAIRYFELLV--KSGTQPDHITFVGVLSA 414
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 166/459 (36%), Positives = 252/459 (54%), Gaps = 32/459 (6%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL--GA 102
V W + I+ + G++ A F RM L G P T++ LL A P + + G
Sbjct: 388 AVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGR 447
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H + G + +GTA++ MYA G +D A +SF AM D +
Sbjct: 448 KLHSRIVSCGYA-SEPAIGTAVVKMYASCGAIDEAA---------ASFQRGAMEDRH--- 494
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
D +SW A+++ + G+ + AL FR M + GV P+ +T ++VL
Sbjct: 495 ----------------DVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVL 538
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTL 281
+ACA L G+ +H ++ + NV V L +Y RCG +E AR++F+++ +R +
Sbjct: 539 DACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDV 598
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
V +N++I ++ NG GEAL+ F MQ+EG +PD SF L+ACSH GL ++G F
Sbjct: 599 VIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRS 658
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M++ Y ++P +HY C VD+ RAG L DA ++ M +KP +V +LL ACR D+
Sbjct: 659 MRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVD 718
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
+ +LDPG +S YV+L+N+ A GKWD A ++R M+ RG++K+ G S IEI
Sbjct: 719 RGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIK 778
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
S +HEF+AGDRSH SE IY LE L +++ GYVP+T
Sbjct: 779 SRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDT 817
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 170/373 (45%), Gaps = 58/373 (15%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
++ V W + + + + G ++EAAL F RM G P+ +T + +GC+ L
Sbjct: 285 RAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSS-----L 339
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G MIH + GLDR ++++G ALLDMY + G + A +F+ + ++ +WN MI G
Sbjct: 340 RFGRMIHACALEKGLDR-DIVLGNALLDMYTRCGSPEEARHLFEGI-PGNAVSWNTMIAG 397
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
++G + + ALE F+ MQ+ G+ P T
Sbjct: 398 SSQKGQM-------------------------------KRALELFQRMQLEGMAPVRATY 426
Query: 219 ISVLNACAN----VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+++L A A+ + G +H ++ + + ++ +Y+ CG I+ A FQ
Sbjct: 427 LNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQ 486
Query: 275 R--MHKR-TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG- 330
R M R +VSWN+II + +G AL +F M G P+ ++ L AC+ A
Sbjct: 487 RGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAA 546
Query: 331 -----LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
++ D LR+ + ++ + + +Y R G LE A + E + ++ + V
Sbjct: 547 LTEGVIVHDHLRHSGMESNVFVATA-------LASMYGRCGSLESAREIFEKVAVERDVV 599
Query: 386 VLGSLLAACRTKG 398
+ +++AA G
Sbjct: 600 IFNAMIAAYSQNG 612
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 165/381 (43%), Gaps = 60/381 (15%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
S+ V WT+ I+ + G+ A F RM G + +TF+ +L CA
Sbjct: 86 SRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGD-- 143
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L G IH + + GL+ +V+ LL +Y G + A ++F+ M + +WNA I
Sbjct: 144 LSQGRSIHAWIVESGLEGKSVLANL-LLHIYGSCGCVASAMLLFERME-RDLVSWNAAIA 201
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
+ GD++ ALE F+ MQ+ GV P +T
Sbjct: 202 ANAQSGDLDM-------------------------------ALELFQRMQLEGVRPARIT 230
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++ L+ CA + IH V + + + V L Y+R G ++ A++VF R
Sbjct: 231 LVITLSVCAKIRQ---ARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAA 287
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS--------HA 329
+R +VSWN+++ +A +G + EA F M EG P V+ A T CS HA
Sbjct: 288 ERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRFGRMIHA 347
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
+E GL ++ ++D+Y+R G E+A ++ E +P N V +
Sbjct: 348 CALEKGLDRDIVLGN------------ALLDMYTRCGSPEEARHLFEGIP--GNAVSWNT 393
Query: 390 LLAACRTKGDIILAERLMKYL 410
++A KG + A L + +
Sbjct: 394 MIAGSSQKGQMKRALELFQRM 414
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 155/347 (44%), Gaps = 48/347 (13%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W ++I+ + +SG + A F RM L G P IT + LS CA IH
Sbjct: 194 VSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQ-----ARAIH 248
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+V + GL++ ++V TAL YA+ G +D
Sbjct: 249 SIVRESGLEQT-LVVSTALASAYARLGHLD------------------------------ 277
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +FD RD +SW A+L + + G+ EA F M G+ P VT+++ C
Sbjct: 278 -QAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGC 336
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ +L G IH L++ ++ + N L+D+Y+RCG E AR +F+ + VSWN
Sbjct: 337 S---SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPGNA-VSWN 392
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS----HAGLIEDGLR-YFD 340
++I G + G + ALE F MQ EG P ++ L A + A + +G + +
Sbjct: 393 TMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSR 452
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
I+ Y P I +V +Y+ G +++A + M+ V+
Sbjct: 453 IVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMEDRHDVV 497
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 171/391 (43%), Gaps = 77/391 (19%)
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
T P H+ + LL D + L G IH + LGL+ +G LL +Y K +
Sbjct: 26 ATRPAHL--VRLLRAAGD--DRLLSQGRRIHARIVSLGLEEE---LGNHLLRLYLKCESL 78
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
GD+E +F + VRD SWT ++ + + G
Sbjct: 79 ----------------------------GDVEE---VFSRLEVRDEASWTTIITAYTEHG 107
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
+ A+ F MQ GV D VT ++VL ACA +G L G IH ++++ + + N
Sbjct: 108 QAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLAN 167
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
L+ +Y CGC+ A +F+RM +R LVSWN+ I A +G + ALE F MQ EG +P
Sbjct: 168 LLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRP 226
Query: 315 DGVSFTGALTACS--------HAGLIEDGLR-----------------YFDIMKKIY-RV 348
++ L+ C+ H+ + E GL + D K+++ R
Sbjct: 227 ARITLVITLSVCAKIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRA 286
Query: 349 SPR-IEHYGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAE 404
+ R + + ++ Y++ G + +A + M + P++V L + C + L
Sbjct: 287 AERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSS-----LRF 341
Query: 405 RLMKYLVDLDPGVDSNYVL---LANMYAAVG 432
M + L+ G+D + VL L +MY G
Sbjct: 342 GRMIHACALEKGLDRDIVLGNALLDMYTRCG 372
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 42/258 (16%)
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++ +L A + L G IH ++ ++ + N L+ LY +C + +VF R+
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLE 89
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS---------- 327
R SW +II + +G A+ F+ MQ+EG + D V+F L AC+
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149
Query: 328 -HAGLIEDGLR----YFDIMKKIY--------------RVSPRIEHYGCIVDLYSRAGRL 368
HA ++E GL +++ IY R+ + + + +++G L
Sbjct: 150 IHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERMERDLVSWNAAIAANAQSGDL 209
Query: 369 EDALNVVENMPM---KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL-- 423
+ AL + + M + +P + L L+ C I R + +V + G++ V+
Sbjct: 210 DMALELFQRMQLEGVRPARITLVITLSVCAK----IRQARAIHSIVR-ESGLEQTLVVST 264
Query: 424 -LANMYAAVGKWDGAGKI 440
LA+ YA +G D A ++
Sbjct: 265 ALASAYARLGHLDQAKEV 282
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 249/443 (56%), Gaps = 33/443 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I ++ + A A +T+M G P+ TF +L C + LG IHG
Sbjct: 81 WNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLS--WVKLGFGIHGK 138
Query: 108 VCKLGLDRNNVMVGT---------------ALLDM---------------YAKFGRMDLA 137
V K G N + T AL D YA+ G++D+A
Sbjct: 139 VLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKLDVA 198
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
+FD M +K +WN MI Y + G++E A ++FDE+P +D ++W A++ G+V +
Sbjct: 199 RQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNK 258
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD-NVKVCNTL 256
EALE F M+ G PD VT++S+L+A A++G L IG IHR + D +V + N L
Sbjct: 259 EALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNAL 318
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
ID+Y++CG I A +VFQ M K+ SWNSII G A++G E++ F M + KP+
Sbjct: 319 IDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNE 378
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
++F L ACSHAG + +G YF++MK ++++ P I+HYGC+VD+ RAG L +A + ++
Sbjct: 379 ITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFID 438
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDG 436
M ++PN ++ +LL ACR GD+ L R + L+ + +YVLL+N+YA+ G+WDG
Sbjct: 439 TMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLLSNIYASQGEWDG 498
Query: 437 AGKIRRTMKGRGIQKKPGLSSIE 459
K+R+ M G++KK G S I+
Sbjct: 499 VQKVRKLMDDGGVKKKVGHSLID 521
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 144/290 (49%), Gaps = 14/290 (4%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G ++ A ++F ++ D W ++ G + A+ + +M+ GV PD T VL
Sbjct: 61 GTMDYAHQLFAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVL 120
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC + + +G IH VLK F+ N V NTLI ++ CG + AR +F KR +V
Sbjct: 121 KACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVV 180
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
W+++ G+A G + A + F+ M + D VS+ +TA + G +E + FD +
Sbjct: 181 PWSALTAGYARRGKLDVARQLFDEMPMK----DLVSWNVMITAYAKHGEMEKARKLFDEV 236
Query: 343 KKIYRVSPRIEHYGCIVD-LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
K V+ G ++ L A + DA+ ++ +P++V + S+L+A GD+
Sbjct: 237 PKKDVVTWNAMIAGYVLSRLNKEALEMFDAM---RDLGQRPDDVTMLSILSASADLGDLE 293
Query: 402 LAERLMKYLVDLDPGVDSNYVLLAN----MYAAVGKWDGAGKIRRTMKGR 447
+ +++ + + D+ G S VLL+N MYA G A ++ + M+ +
Sbjct: 294 IGKKIHRSIFDMCCGDLS--VLLSNALIDMYAKCGSIGNALEVFQGMRKK 341
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 170/465 (36%), Positives = 256/465 (55%), Gaps = 40/465 (8%)
Query: 41 TVNPTVQWTSSISRHCRS-GRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
+ + V W S + S I E+ F+ M G PN +TF+ L+ A P L
Sbjct: 546 SAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLA--ALTPLSVLE 603
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
LG IH ++ K G+ +N V AL+ YAK
Sbjct: 604 LGKQIHSVMLKHGVTEDNA-VDNALMSCYAK----------------------------- 633
Query: 160 MRRGDIESAVRMFDEMP-VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
GD++S R+F M RDAISW ++++G++ G+ +EA++C M S D+ T
Sbjct: 634 --SGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTF 691
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
VLNACA+V L G+ +H + L+ + +V V + L+D+YS+CG I++A +VF M +
Sbjct: 692 SIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQ 751
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ SWNS+I G+A +G +ALE F MQ+ G PD V+F L+ACSHAGL+E GL Y
Sbjct: 752 KNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDY 811
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC---R 395
F++M+ Y + PRIEHY C++DL RAG L+ ++ MPMKPN ++ ++L AC +
Sbjct: 812 FELMED-YGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSK 870
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
+ I L + L++L+P NYVL + +AA+G+W+ K R MKG ++K+ G
Sbjct: 871 HRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGR 930
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
S + + G+H F+AGDRSH ++ IY L L ++ GYVP T
Sbjct: 931 SWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPLT 975
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 155/348 (44%), Gaps = 36/348 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W + I+ ++G A + + M + P++ I+ LS CA L G +H
Sbjct: 450 ISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLG--LLAAGQQLH 507
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
K GL + V AL+ MY + GRM +F++M +WN+++
Sbjct: 508 CDAVKWGL-YLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIM--------- 557
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
V + P+ E+++ F M SG+ P+ VT ++ L A
Sbjct: 558 --GVMASSQAPI-------------------TESVQVFSNMMKSGLVPNKVTFVNFLAAL 596
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSW 284
+ L +G IH +LK ++ V N L+ Y++ G ++ ++F RM +R +SW
Sbjct: 597 TPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISW 656
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
NS+I G+ NG + EA++ M D +F+ L AC+ +E G+ +
Sbjct: 657 NSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLR 716
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
+ S + +VD+YS+ GR++ A V +M K NE S+++
Sbjct: 717 SHLESDVVVE-SALVDMYSKCGRIDYASKVFHSMSQK-NEFSWNSMIS 762
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 178/420 (42%), Gaps = 62/420 (14%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPS--QCLFLGAMIHGLVCKLGLDRNNVMV 120
EAA E N T++ LLS A+F + Q L G +H V + G + V
Sbjct: 361 EAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAV 420
Query: 121 GTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDA 180
L++MYAK G I+ A R+F M RD
Sbjct: 421 SNGLVNMYAKCGA-------------------------------IDKACRVFQLMEARDR 449
Query: 181 ISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
ISW ++ + GY E A+ + M+ + + P IS L++CA +G L G +H
Sbjct: 450 ISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCD 509
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII-VGFAVNGFVGE 299
+K + V N L+ +Y CG + ++F M +VSWNSI+ V + + E
Sbjct: 510 AVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITE 569
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
+++ F++M K G P+ V+F L A + ++E G + +M K + V+ ++
Sbjct: 570 SVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLK-HGVTEDNAVDNALM 628
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
Y+++G ++ + M + + + S+++ G + A + ++ + +D
Sbjct: 629 SCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDH 688
Query: 420 -NYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESE 478
+ ++ N A+V +++E G +H F G RSH+ES+
Sbjct: 689 CTFSIVLNACASV------------------------AALERGMEMHAF--GLRSHLESD 722
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 149/321 (46%), Gaps = 36/321 (11%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM--Q 207
F N +++ Y + +++A R+FD MP R+A+SWT L++G V G E+A FR M +
Sbjct: 101 FLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLRE 160
Query: 208 ISGVEPDYVTIISVLNACANVGT--LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC-- 263
G P T SVL AC + G LG + +H V K +F N VCN LI +Y C
Sbjct: 161 GPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSV 220
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG----FKPDGVSF 319
G A++VF R L++WN+++ +A G F +MQ + +P +F
Sbjct: 221 GPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTF 280
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY---------SRAGRLED 370
G+L ++ GL + ++ R+ GC DLY +R G L++
Sbjct: 281 -GSLITATYLSSCSLGL--------LDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDE 331
Query: 371 ALNVVENMPMKPNEVVLGSLLAA-CRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYA 429
A ++ + + N V L L+A + + AE M VD+ VLL +
Sbjct: 332 AKDIYLGLKER-NAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLL----S 386
Query: 430 AVGKWDGAGKIRRTMKGRGIQ 450
A+ ++ A + R KGR +
Sbjct: 387 AIAEFSTAEQGLR--KGREVH 405
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 192/510 (37%), Gaps = 114/510 (22%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLH---GTNPNHITFITLLSGCADFPSQCLFLG 101
V WT IS H SG + E A R L G P TF ++L C D L
Sbjct: 131 AVSWTCLISGHVLSG-LPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFA 189
Query: 102 AMIHGLVCKLGLDRN--------------------------------NVMVGTALLDMYA 129
+HGLV K N +++ AL+ +YA
Sbjct: 190 VQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYA 249
Query: 130 KFGRMDLATVVFDAMRVKSS---------------------------------------- 149
K G +F AM+ S
Sbjct: 250 KRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGC 309
Query: 150 ----FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
+ +A++ + R G ++ A ++ + R+A++ L+ G VK+ + E A E F
Sbjct: 310 SSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMG 369
Query: 206 MQISG-VEPDYVTIISVLNACANVGTLGIGLW----IHRYVLKQ-DFKDNVKVCNTLIDL 259
+ S V D T + +L+A A T GL +H +VL+ + V N L+++
Sbjct: 370 ARDSAAVNVD--TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNM 427
Query: 260 YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
Y++CG I+ A +VFQ M R +SWN+II NG+ A+ + M++ P +
Sbjct: 428 YAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAA 487
Query: 320 TGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
L++C+ GL+ G + + D +K + + + +V +Y GR+ + + +
Sbjct: 488 ISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSN--ALVKMYGECGRMSECWEIFNS- 544
Query: 379 PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAG 438
M ++VV + + + E + + + G+ N V N AA+
Sbjct: 545 -MSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTP----- 598
Query: 439 KIRRTMKGRGIQKKPGLSSIEIGSGIHEFM 468
LS +E+G IH M
Sbjct: 599 ----------------LSVLELGKQIHSVM 612
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H V+K+ ++ + N L++ Y++ ++ AR+VF M R VSW +I G ++G
Sbjct: 87 LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146
Query: 297 VGEALEYFNSMQKE--GFKPDGVSFTGALTACSHAG 330
+A F +M +E G +P +F L AC +G
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSG 182
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 169/461 (36%), Positives = 252/461 (54%), Gaps = 41/461 (8%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADF-PSQCLFL 100
V V WT+ IS ++ EA F+ M G PN T+ +L+ PS+
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE---- 414
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
+H V K +R++ VGTALLD Y K G+++ A VF + K W+AM+ GY
Sbjct: 415 ---VHAQVVKTNYERSST-VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYA 470
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G+ E+A++MF E+ +G G++P+ T S
Sbjct: 471 QTGETEAAIKMFGELT----------------KG---------------GIKPNEFTFSS 499
Query: 221 VLNACANV-GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+LN CA ++G G H + +K ++ V + L+ +Y++ G IE A +VF+R ++
Sbjct: 500 ILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK 559
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
LVSWNS+I G+A +G +AL+ F M+K K DGV+F G AC+HAGL+E+G +YF
Sbjct: 560 DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYF 619
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
DIM + +++P EH C+VDLYSRAG+LE A+ V+ENMP + ++LAACR
Sbjct: 620 DIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKK 679
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
L + ++ + P + YVLL+NMYA G W K+R+ M R ++K+PG S IE
Sbjct: 680 TELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIE 739
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ + + F+AGDRSH + IY LE LS LK GY P+T
Sbjct: 740 VKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDT 780
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 97/175 (55%)
Query: 154 AMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEP 213
+++D YM+ + + ++FDEM R+ ++WT L++G+ + +E L F MQ G +P
Sbjct: 133 SLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQP 192
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
+ T + L A G G GL +H V+K + V N+LI+LY +CG + AR +F
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 252
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
+ +++V+WNS+I G+A NG EAL F SM+ + SF + C++
Sbjct: 253 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 201/459 (43%), Gaps = 55/459 (11%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ IS + R+ E F RM GT PN TF L A+ G +H
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAE--EGVGGRGLQVH 217
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+V K GLD K+ N++I+ Y++ G++
Sbjct: 218 TVVVKNGLD--------------------------------KTIPVSNSLINLYLKCGNV 245
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +FD+ V+ ++W ++++G+ G EAL F M+++ V + SV+ C
Sbjct: 246 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLC 305
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSW 284
AN+ L +H V+K F + + L+ YS+C + A ++F+ + +VSW
Sbjct: 306 ANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSW 365
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I GF N EA++ F+ M+++G +P+ +++ LTA +I + ++K
Sbjct: 366 TAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKT 422
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y S + ++D Y + G++E+A V + K + V ++LA G+ A
Sbjct: 423 NYERSSTVG--TALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYAQTGETEAAI 479
Query: 405 RLMKYLVDLDPGVDSN---YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
++ L G+ N + + N+ AA G GK + G K L S
Sbjct: 480 KMFGELT--KGGIKPNEFTFSSILNVCAATNASMGQGK-----QFHGFAIKSRLDSSLCV 532
Query: 462 SGIHEFMAGDRSHIES-EHIYSML---ELLSFDLKLCGY 496
S M + +IES E ++ +L+S++ + GY
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGY 571
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 1/224 (0%)
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
G + + +A +FD+ P RD S+ +LL GF + G +EA F + G+E D
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
SVL A + G +H +K F D+V V +L+D Y + + R+VF M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
+R +V+W ++I G+A N E L F MQ EG +P+ +F AL + G+ GL+
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
++ K + I +++LY + G + A + + +K
Sbjct: 216 VHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK 258
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 262/447 (58%), Gaps = 13/447 (2%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
+ +V + S I + +SG I A F M L + N I++ ++L G A
Sbjct: 188 IQDSVSYNSMIDGYVKSGTIDLARELFDSMPLE--DKNLISWNSMLGGFAQTKDGI---- 241
Query: 102 AMIHGLVCKL--GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
GL +L + +++ ++ +AK GR++ A +F+ M + +W+ MIDGY
Sbjct: 242 ----GLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGY 297
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPDYVTI 218
+ GDI+ A +FDEMP +D +++ ++ G+ + GY+ EALE F EMQ S + PD T+
Sbjct: 298 AKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTL 357
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+ L+A + +G + +H Y L+ KV LID+YS+CG IE A +F + +
Sbjct: 358 VVALSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQ 417
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ + WN++I G A NG A M + KPDG++F G L AC+HAGL+++GL
Sbjct: 418 KGIDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLIC 477
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F++M+K++++ P+++HYGC+VD+ +AG +E AL +E MP++PN+++ +LL+AC+
Sbjct: 478 FELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHE 537
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
+ + E + K+L+ +D S+YVLL+N+YA +G W A K+R MK + + K PG S I
Sbjct: 538 NFTIGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWI 597
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLE 485
E+ +HEF+ D+SH IYS+L+
Sbjct: 598 ELEGVVHEFLVRDKSHPYVSEIYSVLD 624
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 177/340 (52%), Gaps = 20/340 (5%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL-GAMIHG 106
W + I + A + F M +G + +F +L CA CL G IHG
Sbjct: 93 WNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACARV---CLVEEGKQIHG 149
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
L+ KL + +N+ + L+ MY + G ++ A VFD M ++ S ++N+MIDGY++ G I+
Sbjct: 150 LLMKLEIG-SNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTID 208
Query: 167 SAVRMFDEMPVRDA--ISWTALLNGFVK-RGYFEEALECFREMQISGVEPDYVTIISVLN 223
A +FD MP+ D ISW ++L GF + + ALE F +M E D V+ +++
Sbjct: 209 LARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKMP----ERDLVSWNTIIG 264
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
A G + + + K+D V + +ID Y++ G I+ AR +F M + +V+
Sbjct: 265 GFAKCGRIEFAHSLFNRMPKRD----VISWSNMIDGYAKLGDIKVARTLFDEMPDKDVVA 320
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFD-I 341
+N+I+ G+A NG+ EALE F+ MQ++ PD + AL+A S G +E +
Sbjct: 321 FNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASMHNYF 380
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
++ V+ ++ ++D+YS+ G +E+A+ + + + K
Sbjct: 381 LENGISVTGKVA--VALIDMYSKCGSIENAILIFDGVDQK 418
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 133/285 (46%), Gaps = 23/285 (8%)
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIH 238
D W A++ + AL F M +G D + +L ACA V + G IH
Sbjct: 89 DPFLWNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACARVCLVEEGKQIH 148
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
++K + N+ + N LI +Y RCG IEFARQVF RM + VS+NS+I G+ +G +
Sbjct: 149 GLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTID 208
Query: 299 EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG----LRYFDIMKKIYRVSPRIEH 354
A E F+SM E + +S+ L + +DG L F+ M + VS
Sbjct: 209 LARELFDSMPLE--DKNLISWNSMLGGFAQT---KDGIGLALELFEKMPERDLVS----- 258
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
+ I+ +++ GR+E A ++ MP K + + +++ GDI +A L + D D
Sbjct: 259 WNTIIGGFAKCGRIEFAHSLFNRMP-KRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKD 317
Query: 415 PGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
V N ++ YA G + A +I M Q++ LS E
Sbjct: 318 V-VAFNTIMAG--YAQNGYYTEALEIFHEM-----QRQSNLSPDE 354
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 150/437 (34%), Positives = 254/437 (58%), Gaps = 38/437 (8%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNA------ 154
G +HGL K L ++N+ V A+LDMY K G + A +VF+ M + + +WNA
Sbjct: 381 GLQVHGLSMK-SLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHE 439
Query: 155 -------------------------------MIDGYMRRGDIESAVRMFDEMPVRDAISW 183
+ID Y + G +E A ++ D + + +SW
Sbjct: 440 QNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSW 499
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
A+++GF + EEA + F +M GV+PD T ++L+ CAN+ T+ +G IH ++K
Sbjct: 500 NAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIK 559
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
++ + + + +TL+D+YS+CG ++ + +F++ R V+WN+++ G+A +G EAL+
Sbjct: 560 KELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKI 619
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F MQ E KP+ +F L AC H GL+E GL YF M Y + P++EHY C+VD+
Sbjct: 620 FEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMG 679
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
R+G++ AL ++E MP + + V+ +LL+ C+ G++ +AE+ ++ L+P + YVL
Sbjct: 680 RSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVL 739
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSM 483
L+N+YA G W+ K+R+ M+ G++K+PG S IEI S +H F+ GD++H S+ IY
Sbjct: 740 LSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYEN 799
Query: 484 LELLSFDLKLCGYVPET 500
L++L+ ++K GY+P+T
Sbjct: 800 LDVLTDEMKWVGYMPDT 816
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 148/304 (48%), Gaps = 16/304 (5%)
Query: 82 TFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVF 141
TF + C+D + C G H + L + V V L+ MY K ++ A VF
Sbjct: 44 TFSHIFQECSDRKALCP--GKQAHARMI-LTEFKPTVFVTNCLIQMYIKCSDLEFAFKVF 100
Query: 142 DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALE 201
D M + + +WNAM+ GY RGDI A ++FD MP RD +SW +L++G++ G + ++
Sbjct: 101 DGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVID 160
Query: 202 CFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
F +M G D T VL +C+++ G G+ IH +K F +V + L+D+Y+
Sbjct: 161 VFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
+C ++ + Q F M ++ VSW++II G N + LE F MQK G +F
Sbjct: 221 KCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFAS 280
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV------DLYSRAGRLEDALNVV 375
+C+ GL + +++ + + + +V D+Y + L DA +
Sbjct: 281 VFRSCA-------GLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLF 333
Query: 376 ENMP 379
++P
Sbjct: 334 NSLP 337
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 185/404 (45%), Gaps = 61/404 (15%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S IS + +G + F +M GT + TF +L C+ G I
Sbjct: 139 VVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGG--GIQI 196
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HGL K+G D +V+ G+ALLDMYAK ++D
Sbjct: 197 HGLAVKMGFD-CDVVTGSALLDMYAKCKKLD----------------------------- 226
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+++ F MP ++ +SW+A++ G V+ LE F+EMQ +GV T SV +
Sbjct: 227 --CSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRS 284
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA + L +G +H + LK DF +V + +D+Y +C + A+++F + L S+
Sbjct: 285 CAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSY 344
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI-MK 343
N+IIVG+A +G D VS +GA AC+ +GL+ + MK
Sbjct: 345 NAIIVGYA--------------RSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMK 390
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD---- 399
+ + + + + I+D+Y + G L +A V E M + + V +++AA G+
Sbjct: 391 SLCQSNICVAN--AILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGNEEKT 447
Query: 400 --IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIR 441
+ + R++K + LD V + L +MY+ G + A K+
Sbjct: 448 LSLFIHNRIIKSRLGLDSFVG---IALIDMYSKCGMMEKAEKLH 488
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 36/255 (14%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + IS + EA F++M G +P++ T+ T+L CA+ + + LG I
Sbjct: 496 VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVT--VELGKQI 553
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K L +++ + + L+DMY+K G M ++F+ + TWNAM+ GY + G
Sbjct: 554 HAQIIKKEL-QSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGL 612
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
E EAL+ F MQ+ V+P++ T ++VL A
Sbjct: 613 GE-------------------------------EALKIFEYMQLENVKPNHATFLAVLRA 641
Query: 225 CANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLV 282
C ++G + GL + H + ++ + ++D+ R G + A ++ + M + V
Sbjct: 642 CGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAV 701
Query: 283 SWNSIIVGFAVNGFV 297
W +++ ++G V
Sbjct: 702 IWRTLLSICKIHGNV 716
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 154/399 (38%), Positives = 244/399 (61%), Gaps = 13/399 (3%)
Query: 68 FTRMTLHGTNPNHITFITLLSG------CADFPS--QCLFLGAMIHGLVCKLGLDRNNVM 119
F +M + +P+ TF L+ +FPS +C IHG V K G +++
Sbjct: 104 FNQMRQNHVDPDEFTFNFLIKARSRVHKVHNFPSTLEC----DEIHGAVFKYGF-CSHLF 158
Query: 120 VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD 179
V AL+++YA G A VF+ +W+ ++ ++R G++E A ++FD+MP +D
Sbjct: 159 VQNALINLYAVKGSPAAAWRVFNETVGVDVVSWSGLVLAHVRGGELELARQVFDDMPEKD 218
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHR 239
+SWTA+++G+ K EALE F EM +G+ PD VTI+SV++AC N+G + G+ +H
Sbjct: 219 VVSWTAMVSGYSKANCSREALELFWEMSDAGIRPDEVTIVSVISACTNLGDVETGMNVHS 278
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
Y+ + F V +CN LI++Y++CGC++ A +VF M +++L++WNS+I A +G+ +
Sbjct: 279 YINENGFGWMVSLCNALINMYAKCGCVDRAWRVFNNMKRKSLITWNSMISACANHGYAED 338
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
A E F+ M G PDG++F L A +H GL+++G R F IM++ Y + IEHYGCIV
Sbjct: 339 AFELFSCMLNSGIAPDGITFLALLIAYTHKGLVDEGYRLFQIMERDYGIEASIEHYGCIV 398
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
D+ RAGRLE+A ++ MP+ N++V G+LLAACR GD+ + ER++K L++L P
Sbjct: 399 DMLGRAGRLEEAYELIVTMPIPSNDIVWGALLAACRIYGDVNMGERVVKKLLELKPDEGG 458
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
Y+LL ++Y A G+ A IR+ M+ G K PG S +
Sbjct: 459 YYILLRDIYVASGRTAEANHIRQAMQESGAMKNPGYSWV 497
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 41/274 (14%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD+ A R+FD+MP + + ++ G+ K + F +M+ + V+PD T ++
Sbjct: 64 GDLPYAQRLFDQMPQPNTFFYNTIIRGYAKSSSPSYCVNLFNQMRQNHVDPDEFTFNFLI 123
Query: 223 NACANV-------GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS-------------- 261
A + V TL IH V K F ++ V N LI+LY+
Sbjct: 124 KARSRVHKVHNFPSTLECDE-IHGAVFKYGFCSHLFVQNALINLYAVKGSPAAAWRVFNE 182
Query: 262 -----------------RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
R G +E ARQVF M ++ +VSW +++ G++ EALE F
Sbjct: 183 TVGVDVVSWSGLVLAHVRGGELELARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELF 242
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
M G +PD V+ ++AC++ G +E G+ + + + ++++Y++
Sbjct: 243 WEMSDAGIRPDEVTIVSVISACTNLGDVETGMNVHSYINE-NGFGWMVSLCNALINMYAK 301
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
G ++ A V NM K + + S+++AC G
Sbjct: 302 CGCVDRAWRVFNNMKRK-SLITWNSMISACANHG 334
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 249/441 (56%), Gaps = 37/441 (8%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ M G PN ++ ++ C S L G IH + + G +N+++ T L+D+
Sbjct: 156 YREMRRRGVPPNPLSSSFVMKSCIRISS--LMGGLQIHARILRDGHQSDNLLL-TTLMDL 212
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y+ + E A ++FDE+P D +SW L+
Sbjct: 213 YSCCDK-------------------------------FEEACKVFDEIPQWDTVSWNVLI 241
Query: 188 NGFVKRGYFEEALECFREMQIS--GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
+ + +AL F MQ + G EPD VT + +L ACAN+G L G +H Y+ +
Sbjct: 242 SCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHG 301
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
+ + +CN+LI +YSRCG +E A +F+RM +R +VSW+++I GFA++G+ EA+E F
Sbjct: 302 YDGALNLCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFE 361
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
MQ+ G PD + TG L+ACSH GL++DGL +FD M K++ + P I HYGC+VDL RA
Sbjct: 362 QMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRA 421
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLA 425
G L+ A ++ +M +KP+ + +LL ACR L ER++ +L++L +YVLL
Sbjct: 422 GLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLL 481
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
N+Y++VG WD +R+ MK +GIQ PG S+IE+ +HEF+ D H ++ IY ML+
Sbjct: 482 NIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLD 541
Query: 486 LLSFDLKLCGYVPETVAGELY 506
+ LK+ GYV E ++ EL+
Sbjct: 542 EIGKQLKIAGYVAE-LSSELH 561
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 12/260 (4%)
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID-GYMRRGDIESAVRMFDEMPVRDA 180
T LL ++A R L F +++ S + D GY + ++F ++
Sbjct: 82 THLLQIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGY--------SSQVFSQIMKPSG 133
Query: 181 ISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
+ ++ + E+ +REM+ GV P+ ++ V+ +C + +L GL IH
Sbjct: 134 SQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHAR 193
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
+L+ + + + TL+DLYS C E A +VF + + VSWN +I N +A
Sbjct: 194 ILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDA 253
Query: 301 LEYFNSMQK--EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCI 358
L F+ MQ +GF+PD V+ L AC++ G +E G R + +++ + + +
Sbjct: 254 LRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEE-HGYDGALNLCNSL 312
Query: 359 VDLYSRAGRLEDALNVVENM 378
+ +YSR GRLE A ++ + M
Sbjct: 313 ITMYSRCGRLEKAYSIFKRM 332
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 37/235 (15%)
Query: 45 TVQWTSSIS--RHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
TV W IS H R R A + + T G P+ +T + LL CA+ + L G
Sbjct: 234 TVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGA--LEFGE 291
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H + + G D + + +L+ MY++ GR++ A +F M ++ +W+AMI G
Sbjct: 292 RVHNYIEEHGYD-GALNLCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISG---- 346
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
F GY EA+E F +MQ GV PD T+ VL
Sbjct: 347 ---------------------------FAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVL 379
Query: 223 NACANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+AC++ G + GL + R + N+ ++DL R G ++ A Q+ M
Sbjct: 380 SACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSM 434
>gi|226501952|ref|NP_001151797.1| tetratricopeptide-like helical [Zea mays]
gi|195649749|gb|ACG44342.1| tetratricopeptide-like helical [Zea mays]
Length = 460
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 251/443 (56%), Gaps = 7/443 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ T++I R GR +A F+R+ G PN TF T+L + +G +H
Sbjct: 7 ISATAAIGALTRGGRHRDALALFSRVLAGGVAPNEFTFGTVLRSATALRVRAPRVGVQLH 66
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
KLGL +NV VG+ALLD YAK G M A D R + ++ A+I G ++ G
Sbjct: 67 ACAAKLGLC-SNVFVGSALLDHYAKMGAMTEAQRALDDTREPNVVSYTALIAGLLKNGMF 125
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A R+F MP R+ +SW A++ G+ + G EEA+ F EM GV P+ T VL +
Sbjct: 126 DEADRLFRRMPERNVVSWNAMIGGYSQAGLGEEAVNLFLEMCRGGVSPNESTFPCVLTSV 185
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A+ GTLG+G IH +K K +V + N+L+ Y+RCG +E + F++++++ +VSWN
Sbjct: 186 ASAGTLGVGRSIHASAIKFLGKLDVYIGNSLVSFYARCGSLEDSVLAFKKINRKNVVSWN 245
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G+A NG EAL+ + M+ G KPD ++ G L C+H GL+++G + + K
Sbjct: 246 ALICGYAQNGKGEEALDAYRMMRATGLKPDNLTLLGLLFGCNHTGLVDEG---YALFKTA 302
Query: 346 YRVSPRI---EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
R P I EHY C+VDL SRA R ++A +E +P +P +LL C+ + L
Sbjct: 303 EREQPGILKPEHYACVVDLLSRAKRFDEARRFLEELPFEPGIGFWKALLGGCQIHWNSKL 362
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
AE + K + LDP S+Y+LL+N+Y+A G W +RR +K +G+++ G S IE+
Sbjct: 363 AESVAKRIRALDPKDTSSYILLSNVYSASGSWQSVSMVRREIKEKGLKRITGCSWIEVQE 422
Query: 463 GIHEFMAGDRSHIESEHIYSMLE 485
+H F GD H +S+ IYSMLE
Sbjct: 423 KVHVFFNGDCRHHQSDEIYSMLE 445
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 161/431 (37%), Positives = 246/431 (57%), Gaps = 38/431 (8%)
Query: 70 RMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA 129
+MT+ G +P+H TF +L CA + G +H L+ KLG D ++V V L+ Y
Sbjct: 77 KMTMAGVSPDHFTFPFVLKACARLQT-----GLDLHSLLFKLGFD-SDVYVQNGLIHFYG 130
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
G +D A ++ F+EMP RD +SW++++
Sbjct: 131 CCGFLDFA-------------------------------LKAFEEMPERDLVSWSSMIAC 159
Query: 190 FVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD 248
F K G+ EAL F+ MQ+ G V+PD V ++SV++A + +G L +G WI ++ + +
Sbjct: 160 FAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEF 219
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
V + L+D++SRCGCIE + +VF M +R +++W ++I G AV+G EAL F M+
Sbjct: 220 TVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMR 279
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
GF+PD V+FTG L ACSH GL+ +G F+ ++ Y + P EHYGC+VDL RAG L
Sbjct: 280 NHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLL 339
Query: 369 EDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMY 428
+A V+ MP++PN ++ +LL AC I LAE++ + + +LD D +YVLL+N+Y
Sbjct: 340 NEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVY 399
Query: 429 AAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
VG+W +R +M+ + I KKPG S I + IHEF+AGD +H + E I L +
Sbjct: 400 GGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMI 459
Query: 489 FDLKLCGYVPE 499
LK+ GY P+
Sbjct: 460 DSLKVVGYTPD 470
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 35/190 (18%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMI 104
V W+S I+ ++G EA F RM L GT P+ + ++++S + L LG I
Sbjct: 151 VSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGD--LELGKWI 208
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
G + + GL+ V +GTAL+DM+++ G ++ + VFD M ++ TW A+I+G G
Sbjct: 209 RGFISRNGLEFT-VSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGR 267
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A+RM F EM+ G +PD+VT VL A
Sbjct: 268 SAEALRM-------------------------------FYEMRNHGFQPDHVTFTGVLVA 296
Query: 225 CANVGTLGIG 234
C++ G + G
Sbjct: 297 CSHGGLVSEG 306
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 160/434 (36%), Positives = 253/434 (58%), Gaps = 35/434 (8%)
Query: 60 RIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNV 118
R++EAA++ R L G PN + + L CA + + +G +HG V K +
Sbjct: 429 RMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAA--MRIGQELHGYVLKNAYE-GRC 485
Query: 119 MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR 178
V +AL+DMY+K GR+DL+ MF +M +
Sbjct: 486 YVESALMDMYSKCGRLDLSHY-------------------------------MFSKMSAK 514
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIH 238
D ++W ++++ F + G EEAL+ FR+M + GV+ + VTI S+L+ACA + + G IH
Sbjct: 515 DEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIH 574
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
++K + ++ + LID+Y +CG +E A +VF+ M ++ VSWNSII + +G V
Sbjct: 575 GIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVK 634
Query: 299 EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCI 358
E+++ MQ+EGFK D V+F ++AC+HAG +++GLR F M + Y + P++EH C+
Sbjct: 635 ESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCM 694
Query: 359 VDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD 418
VDLYSRAG+L+ A+ + +MP KP+ + G+LL ACR ++ LAE + L LDP
Sbjct: 695 VDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNC 754
Query: 419 SNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESE 478
YVL++N+ A G+WDG K+RR MK + +QK PG S +++ + H F+A D++H +SE
Sbjct: 755 GYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPDSE 814
Query: 479 HIYSMLELLSFDLK 492
IY L+ L +LK
Sbjct: 815 EIYMSLKSLIIELK 828
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 190/405 (46%), Gaps = 46/405 (11%)
Query: 31 ISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNP--NHITFITLLS 88
+++ ++ ++ + W I +G A L + +M H ++P + T ++
Sbjct: 96 VAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVK 155
Query: 89 GCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS 148
CA + L LG ++H LGLDR+ + VG+AL+ MYA G +D
Sbjct: 156 SCAALGA--LHLGRLVHRTTRALGLDRD-MYVGSALIKMYADAGLLD------------- 199
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
A +FD M RD + W +++G+VK G A+ FR M+
Sbjct: 200 ------------------GAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRA 241
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
SG +P++ T+ L+ CA L G+ +H +K + V V NTL+ +Y++C C+E
Sbjct: 242 SGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEE 301
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
A ++F M + LV+WN +I G NG V +AL F MQK G +PD V+ L A +
Sbjct: 302 AWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTE 361
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMKPNEVV 386
+ G +I I R ++ + +VD+Y + + A NV + K +VV
Sbjct: 362 LNGFKQGK---EIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFD--ATKSIDVV 416
Query: 387 LGSLLAACRTKGDIILAE-RLMKYLVDLDPGVDSNYVLLANMYAA 430
+GS + + + A ++ +YL+ L G+ N V++A+ A
Sbjct: 417 IGSTMISGYVLNRMSEAAVKMFRYLLAL--GIKPNAVMVASTLPA 459
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 187/405 (46%), Gaps = 51/405 (12%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W IS ++G + +A F M G P+ +T +LL + G IH
Sbjct: 315 VTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNG--FKQGKEIH 372
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G + RN V F +A++D Y + D+
Sbjct: 373 GYIV-----RNCAHVDV---------------------------FLVSALVDIYFKCRDV 400
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +FD D + + +++G+V E A++ FR + G++P+ V + S L AC
Sbjct: 401 RMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPAC 460
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ + IG +H YVLK ++ V + L+D+YS+CG ++ + +F +M + V+WN
Sbjct: 461 ASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWN 520
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S+I FA NG EAL+ F M EG K + V+ + L+AC+ I G I+ K
Sbjct: 521 SMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIK- 579
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ + ++D+Y + G LE AL V E+MP K NEV S+++A G
Sbjct: 580 GPIRADLFAESALIDMYGKCGNLELALRVFEHMPEK-NEVSWNSIISAYGAHG------- 631
Query: 406 LMKYLVDL-----DPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
L+K VDL + G +++V + +A AG+++ ++
Sbjct: 632 LVKESVDLLCCMQEEGFKADHVTFLALISACAH---AGQVQEGLR 673
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 174/386 (45%), Gaps = 40/386 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + + ++G +A A F M G +PN T LS CA L G +H
Sbjct: 214 VLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCA--AEADLLSGVQLH 271
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L K GL+ V V L+ MYAK +
Sbjct: 272 TLAVKYGLE-PEVAVANTLVSMYAKCQ-------------------------------CL 299
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A R+F MP D ++W +++G V+ G ++AL F +MQ SG++PD VT+ S+L A
Sbjct: 300 EEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPAL 359
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ G IH Y+++ +V + + L+D+Y +C + A+ VF +V +
Sbjct: 360 TELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGS 419
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKK 344
++I G+ +N A++ F + G KP+ V L AC+ + G ++K
Sbjct: 420 TMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKN 479
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y +E ++D+YS+ GRL+ + + M K +EV S++++ G+ A
Sbjct: 480 AYEGRCYVE--SALMDMYSKCGRLDLSHYMFSKMSAK-DEVTWNSMISSFAQNGEPEEAL 536
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAA 430
L + ++ GV N V ++++ +A
Sbjct: 537 DLFRQMI--MEGVKYNNVTISSILSA 560
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 134/288 (46%), Gaps = 11/288 (3%)
Query: 155 MIDGYMRRGDIESAVRMFDEMP---VRDAISWTALLNGFVKRGYFEEALECFREM--QIS 209
++ Y+ AV +F +P A+ W L+ GF G+ A+ + +M S
Sbjct: 82 LVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPS 141
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
PD T+ V+ +CA +G L +G +HR ++ V + LI +Y+ G ++ A
Sbjct: 142 SPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGA 201
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
R+VF M +R V WN ++ G+ G V A+ F M+ G P+ + L+ C+
Sbjct: 202 REVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAE 261
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
+ G++ + K Y + P + +V +Y++ LE+A + MP + + V
Sbjct: 262 ADLLSGVQLHTLAVK-YGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMP-RDDLVTWNG 319
Query: 390 LLAACRTKGDIILAERLMKYLVDLD-PGVDSNYVLLANMYAAVGKWDG 436
+++ C G L + ++ D+ G+ + V LA++ A+ + +G
Sbjct: 320 MISGCVQNG---LVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNG 364
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 153/437 (35%), Positives = 256/437 (58%), Gaps = 3/437 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I+ + ++G EA F M G + T ++LL C+ L G ++
Sbjct: 176 VVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACS--AEGNLEFGKLV 233
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + G R ++++ AL+DMY K G + +A FD M K++ +W +M+ +R
Sbjct: 234 HSHLLVRGC-RIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRAS 292
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I++A F+++P + ISW A+++ +V+ G F EAL+ + M++ G+ PD T+ +VL+A
Sbjct: 293 IDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSA 352
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C +G L G IH + V + N+L+D+Y+RCG ++ A +F M + ++SW
Sbjct: 353 CGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISW 412
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+II A++G +AL +F SM + F PD ++F L+AC+H GL+E G YF M+
Sbjct: 413 NAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRH 472
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y V P +EHY C+VDL R G+L A++++++MPM+P+ VV G+LL ACR G I + +
Sbjct: 473 VYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGK 532
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+++K L++L+ +VL++NM +W+ ++R+ M+ G++K G+SSIE S I
Sbjct: 533 QVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNSNI 592
Query: 465 HEFMAGDRSHIESEHIY 481
HE A H S+ +Y
Sbjct: 593 HESGAEGIGHESSDDMY 609
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 195/468 (41%), Gaps = 104/468 (22%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
+ S I +C S EA M G PN T LL CA Q + HG+
Sbjct: 78 YNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARV--QAWEHVMVTHGV 135
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG V VG ALL YA G + + FD M ++ +WN+MI+GY + G+
Sbjct: 136 VVKLGF-VGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNT-- 192
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
EA F M+ G+ D T++S+L AC+
Sbjct: 193 -----------------------------REACSLFEGMRRQGLLADEFTLVSLLFACSA 223
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG----------------------- 264
G L G +H ++L + + ++ + N L+D+Y +CG
Sbjct: 224 EGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSM 283
Query: 265 --------CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
I+ AR F+++ +++++SWN++I + G EAL+ +N M+ G PD
Sbjct: 284 LCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDE 343
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
+ L+AC G + G D ++ + +P + + ++D+Y+R G+++ A+++
Sbjct: 344 FTLAAVLSACGQLGDLASGKMIHDCIRDNFH-NPGVALFNSLLDMYARCGQVDTAISLFS 402
Query: 377 NMPMK----------------------------------PNEVVLGSLLAACRTKGDIIL 402
MP K P+E+ +LL+AC G +
Sbjct: 403 EMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACNHGGLLEA 462
Query: 403 AE---RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447
+ + M+++ ++ PGV+ +Y + ++ G+ A + + M R
Sbjct: 463 GQYYFQAMRHVYNVKPGVE-HYACMVDLLGRGGQLAKAVDLIKDMPMR 509
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 114/239 (47%), Gaps = 4/239 (1%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G + A ++FD +P D + +L+ + +EAL R M G+ P+ T+ +L
Sbjct: 58 GGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLL 117
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
ACA V + H V+K F V V N L+ Y+ G + +R+ F M R +V
Sbjct: 118 KACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVV 177
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDI 341
SWNS+I G+A G EA F M+++G D + L ACS G +E G L + +
Sbjct: 178 SWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHL 237
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+ + R+ + + +VD+Y + G L A + MP K N V S+L A + I
Sbjct: 238 LVRGCRIDLILAN--ALVDMYGKCGDLLMAHTCFDMMPFK-NAVSWTSMLCALAKRASI 293
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
G G+W R + + + V N+LI Y C + A + + M +R ++ N + F
Sbjct: 57 GGGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILP-NEFTLPF 115
Query: 292 AVNGFVG-EALEYF----NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+ +A E+ + K GF L + + AG + D R+FD M
Sbjct: 116 LLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEM---- 171
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK---PNEVVLGSLLAACRTKGDIILA 403
V + + +++ Y++AG +A ++ E M + +E L SLL AC +G++
Sbjct: 172 -VDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFG 230
Query: 404 ERLMKYLVDLDPGVDSNYVL---LANMYAAVG 432
+ + +L L G + +L L +MY G
Sbjct: 231 KLVHSHL--LVRGCRIDLILANALVDMYGKCG 260
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 159/411 (38%), Positives = 235/411 (57%), Gaps = 35/411 (8%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + I+ + +SGR EA F M PN T +T+LS CA S L LG
Sbjct: 226 VRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQ--SGSLELG 283
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ + GL N +V NA+ID Y +
Sbjct: 284 NWVRSWIEDHGLGSNLRLV--------------------------------NALIDMYSK 311
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
GD++ A +F+ + +D ISW ++ G+ ++EAL FR+MQ S VEP+ VT +S+
Sbjct: 312 CGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSI 371
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFK-DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
L ACA +G L +G WIH Y+ K+ N + +LID+Y++CG IE A+QVF M ++
Sbjct: 372 LPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKS 431
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
L SWN++I G A++G ALE F M+ EGF+PD ++F G L+ACSHAGL+E G + F
Sbjct: 432 LGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFS 491
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + Y +SP+++HYGC++DL RAG ++A +++NM MKP+ + GSLL ACR G++
Sbjct: 492 SMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNV 551
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQK 451
L E K+L +L+P YVLL+N+YA G+WD +IR + +G++K
Sbjct: 552 ELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 223/435 (51%), Gaps = 41/435 (9%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I + S A + RM L G PN TF LL CA + G IHG
Sbjct: 100 WNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQE--GKQIHGH 157
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLGL+ ++ V T+L++MYA+ G + A +VF ++ + ++ A+I GY RG ++
Sbjct: 158 VLKLGLE-SDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDD 216
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A R+F+E+PVRDA+SW A++ G+ + G FEEAL F+EM+ + V P+ T+++VL+ACA
Sbjct: 217 ARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQ 276
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G+L +G W+ ++ N+++ N LID+YS+CG ++ AR +F+ + ++ ++SWN +
Sbjct: 277 SGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVM 336
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G++ EAL F MQ+ +P+ V+F L AC++ G ++ G + K +
Sbjct: 337 IGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFL 396
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK-------------------------- 381
+ ++D+Y++ G +E A V M K
Sbjct: 397 GLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFR 456
Query: 382 --------PNEVVLGSLLAACRTKGDIILAERLMKYLV---DLDPGVDSNYVLLANMYAA 430
P+++ +L+AC G + L + +V D+ P + +Y + ++
Sbjct: 457 QMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQ-HYGCMIDLLGR 515
Query: 431 VGKWDGAGKIRRTMK 445
G +D A + + M+
Sbjct: 516 AGLFDEAEALMKNME 530
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 179/413 (43%), Gaps = 54/413 (13%)
Query: 79 NHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA--KFGRMDL 136
NH + +TLLS C F + IH + K GL N + L++ A FG +
Sbjct: 32 NHPS-LTLLSTCKSFQNL-----KQIHSQIIKTGL-HNTQFALSKLIEFCAISPFGNLSY 84
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRR----GDIESAVRMFDEMPVRDAISWTALLNGFVK 192
A ++F+++ + F WN MI G G I+ VRM ++ ++ LL K
Sbjct: 85 ALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAK 144
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
G +E + + G+E D S++N A G LG + K +D V
Sbjct: 145 VGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFS---KSSLRDAVSF 201
Query: 253 CNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF 312
LI Y+ GC++ AR++F+ + R VSWN++I G+A +G EAL +F M++
Sbjct: 202 -TALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANV 260
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
P+ + L+AC+ +G +E G + + + + + ++D+YS+ G L+ A
Sbjct: 261 APNESTMVTVLSACAQSGSLELG-NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKAR 319
Query: 373 NVVENMPMK----------------------------------PNEVVLGSLLAACRTKG 398
++ E + K PN+V S+L AC G
Sbjct: 320 DLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLG 379
Query: 399 DIILAERLMKYLVDLDPGV--DSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+ L + + Y+ G+ S + L +MYA G + A ++ MK + +
Sbjct: 380 ALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSL 432
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 165/458 (36%), Positives = 257/458 (56%), Gaps = 39/458 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT---NPNHITFITLLSGCADFPSQCLFLGA 102
V W++ I R+ +A L F M G +P I + L CA L +G
Sbjct: 305 VTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDH--LRMGE 360
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H L+ K G+ ++ G +LL MYAK G
Sbjct: 361 QLHALLAKSGV-HADLTAGNSLLSMYAKAGL----------------------------- 390
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
I+ A+ +FDEM V+D +S++AL++G+V+ G EEA F++MQ VEPD T++S++
Sbjct: 391 --IDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLI 448
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC+++ L G H V+ + +CN LID+Y++CG I+ +RQVF M R +V
Sbjct: 449 PACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIV 508
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN++I G+ ++G EA F M GF PDGV+F L+ACSH+GL+ +G +F +M
Sbjct: 509 SWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVM 568
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
Y ++PR+EHY C+VDL SR G L++A +++MP++ + V +LL ACR +I L
Sbjct: 569 GHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDL 628
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
+++ + + +L P N+VLL+N+Y+A G++D A ++R K +G +K PG S IEI
Sbjct: 629 GKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEING 688
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F+ GD+SH +S IY L+ + +K GY P+T
Sbjct: 689 SLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDT 726
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 182/464 (39%), Gaps = 122/464 (26%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ RM H PN+ TF L C+ G IH GL + ++ V TALLDM
Sbjct: 113 YRRMLRHRVAPNNYTFPFALKACSALADH--HCGRAIHRHAIHAGL-QADLFVSTALLDM 169
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y ++ + A +F MP RD ++W A+L
Sbjct: 170 Y-------------------------------VKCACLPDAAHIFATMPARDLVAWNAML 198
Query: 188 NGFVKRGYFEEALECF--REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL--- 242
G+ G + A+ +MQ+ + P+ T++++L A G L G +H Y +
Sbjct: 199 AGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRAC 258
Query: 243 -------KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
K D V + L+D+Y++CG + +AR+VF M R V+W+++I GF +
Sbjct: 259 LHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCS 318
Query: 296 FVGEALEYFNSMQKEG---FKPDGVSFTGALTAC-------------------------- 326
+ +A F +M +G P S AL AC
Sbjct: 319 RMTQAFLLFKAMLAQGLCFLSP--TSIASALRACASLDHLRMGEQLHALLAKSGVHADLT 376
Query: 327 ---------SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
+ AGLI+ + FD M VS Y +V Y + GR E+A V +
Sbjct: 377 AGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS-----YSALVSGYVQNGRAEEAFLVFKK 431
Query: 378 MP---MKPNEVVLGSLLAACR----------TKGDIILAERLMKYLVDLDPGVDSNYVL- 423
M ++P+ + SL+ AC + G +I+ G+ S +
Sbjct: 432 MQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR------------GLASETSIC 479
Query: 424 --LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
L +MYA G+ D + ++ M R I +++ G GIH
Sbjct: 480 NALIDMYAKCGRIDLSRQVFNMMPSRDIVS---WNTMIAGYGIH 520
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 20/263 (7%)
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA--LECFREMQISGVEPDYV 216
++ G + A +FD++P D ++ L+ + A L +R M V P+
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T L AC+ + G IHR+ + + ++ V L+D+Y +C C+ A +F M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE--GFKPDGVSFTGALTACSHAGLIED 334
R LV+WN+++ G+A +G A+ + SMQ + +P+ + L + G +
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 335 G--LRYFDIMKKIY-------RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
G + + I ++ +++ + ++D+Y++ G L A V + MP + NEV
Sbjct: 247 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEV 305
Query: 386 VLGSLLAACRTKGDIILAERLMK 408
+L+ G +L R+ +
Sbjct: 306 TWSALI------GGFVLCSRMTQ 322
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 160/448 (35%), Positives = 260/448 (58%), Gaps = 10/448 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAA---LEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V W + + + + G EA +F R+ + N +F +L C L L
Sbjct: 160 VVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDM---GFNAFSFAGVLILCVKLKE--LQLA 214
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+HG V G +N+++ ++++D Y+K G M A +FD M VK W ++ GY +
Sbjct: 215 KQVHGQVLVAGF-LSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAK 273
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
GD+ SA +F +MP ++ +SW+AL++G+ + EAL+ F +M G+ P+ T S
Sbjct: 274 WGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSC 333
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRT 280
L ACA++ L G +H Y+++ F+ N V ++LID+YS+CG +E + VF M +K+
Sbjct: 334 LCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQD 393
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+V WN++I A NG +A++ FN M + G KPD ++F L+ACSH+GL+++GLR+F
Sbjct: 394 VVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFK 453
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + V P EHY C++DL RAG + +N +ENM KP++ V +LL CR +I
Sbjct: 454 AMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNI 513
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L ++ + +++L P + YV LA++YA +GKW+ K+R M + I+K+ G+S I++
Sbjct: 514 ELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDV 573
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLS 488
G+ H F+A DR H E IY +LE L+
Sbjct: 574 GNKTHSFIASDRLHPLKEEIYLLLEQLA 601
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 180/386 (46%), Gaps = 37/386 (9%)
Query: 59 GRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNV 118
GR+ EA R+ G F+ LL CA ++ G +H + G R
Sbjct: 41 GRLPEALSYLDRLAQRGIRLPTGIFVDLLRLCA--KAKYFKGGKCVHLHLKHTGFKRPTT 98
Query: 119 MVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR 178
+V L+ MY + GR A VFD M V++ ++WN M+ GY + GD+ +A ++FD M +
Sbjct: 99 IVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEK 158
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIH 238
D +SW ++ + K+G F EA+ +R+ + + + + VL C + L + +H
Sbjct: 159 DVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVH 218
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR---------------------------- 270
VL F N+ + ++++D YS+CG + AR
Sbjct: 219 GQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMN 278
Query: 271 ---QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
++F +M ++ VSW+++I G+A N EAL+YF M K G P+ +F+ L AC+
Sbjct: 279 SASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACA 338
Query: 328 HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
++ G + + + Y I ++D+YS+ G LE + V M K + VV
Sbjct: 339 SIAALKHGKQVHGYLIRTYFRCNTIV-VSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVW 397
Query: 388 GSLLAACRTKGDIILAERLMKYLVDL 413
++++A G E+ M+ D+
Sbjct: 398 NTMISALAQNGH---GEKAMQMFNDM 420
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 165/458 (36%), Positives = 257/458 (56%), Gaps = 39/458 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT---NPNHITFITLLSGCADFPSQCLFLGA 102
V W++ I R+ +A L F M G +P I + L CA L +G
Sbjct: 190 VTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDH--LRMGE 245
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H L+ K G+ ++ G +LL MYAK G
Sbjct: 246 QLHALLAKSGV-HADLTAGNSLLSMYAKAGL----------------------------- 275
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
I+ A+ +FDEM V+D +S++AL++G+V+ G EEA F++MQ VEPD T++S++
Sbjct: 276 --IDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLI 333
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC+++ L G H V+ + +CN LID+Y++CG I+ +RQVF M R +V
Sbjct: 334 PACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIV 393
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN++I G+ ++G EA F M GF PDGV+F L+ACSH+GL+ +G +F +M
Sbjct: 394 SWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVM 453
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
Y ++PR+EHY C+VDL SR G L++A +++MP++ + V +LL ACR +I L
Sbjct: 454 GHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDL 513
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
+++ + + +L P N+VLL+N+Y+A G++D A ++R K +G +K PG S IEI
Sbjct: 514 GKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEING 573
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F+ GD+SH +S IY L+ + +K GY P+T
Sbjct: 574 SLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDT 611
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 180/461 (39%), Gaps = 122/461 (26%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
M H PN+ TF L C+ G IH GL + ++ V TALLDMY
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADH--HCGRAIHRHAIHAGL-QADLFVSTALLDMY-- 55
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
++ + A +F MP RD ++W A+L G+
Sbjct: 56 -----------------------------VKCACLPDAAHIFATMPARDLVAWNAMLAGY 86
Query: 191 VKRGYFEEALECF--REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL------ 242
G + A+ +MQ+ + P+ T++++L A G L G +H Y +
Sbjct: 87 AHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHP 146
Query: 243 ----KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
K D V + L+D+Y++CG + +AR+VF M R V+W+++I GF + +
Sbjct: 147 NRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMT 206
Query: 299 EALEYFNSMQKEG---FKPDGVSFTGALTAC----------------------------- 326
+A F +M +G P S AL AC
Sbjct: 207 QAFLLFKAMLAQGLCFLSP--TSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGN 264
Query: 327 ------SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP- 379
+ AGLI+ + FD M VS Y +V Y + GR E+A V + M
Sbjct: 265 SLLSMYAKAGLIDQAIALFDEMAVKDTVS-----YSALVSGYVQNGRAEEAFLVFKKMQA 319
Query: 380 --MKPNEVVLGSLLAACR----------TKGDIILAERLMKYLVDLDPGVDSNYVL---L 424
++P+ + SL+ AC + G +I+ G+ S + L
Sbjct: 320 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVII------------RGLASETSICNAL 367
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+MYA G+ D + ++ M R I +++ G GIH
Sbjct: 368 IDMYAKCGRIDLSRQVFNMMPSRDIVS---WNTMIAGYGIH 405
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 253/443 (57%), Gaps = 34/443 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV + + +S + + + ++A L F +M G N +T + L+ C P L LG+ +
Sbjct: 108 TVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVS-PIN-LELGSSL 165
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H K G D D++ V N I YM+ G
Sbjct: 166 HCSTLKYGFDS-------------------DVSVV-------------NCFITMYMKCGS 193
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A ++FDEMPV+ ISW A+++G+ + G LE +R M ++GV PD VT++ VL++
Sbjct: 194 VNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSS 253
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CAN+G +G + + F N + N LI++Y+RCG + A+ VF M +RTLVSW
Sbjct: 254 CANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSW 313
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+II G+ ++G A++ F M + G +PDG +F L+ACSHAGL + GL YF +MK+
Sbjct: 314 TAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKR 373
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y++ P EHY C+VDL RAGRL++A ++E+MP+KP+ V G+LL AC+ ++ LAE
Sbjct: 374 NYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAE 433
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ +++L+P YVLL+N+Y+ G +IR MK + ++K PG S +E+ +
Sbjct: 434 LAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRV 493
Query: 465 HEFMAGDRSHIESEHIYSMLELL 487
H F+ GDR+H++S+ IY +LE L
Sbjct: 494 HPFIVGDRNHLQSDEIYRVLEEL 516
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 3/201 (1%)
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
W L KR F +AL + +M G P+ T L +CA + +G H +
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR-MHKRTL-VSWNSIIVGFAVNGFVGEA 300
K V LI +Y + ++ AR+VF+ H R L V +N+++ G+ N +A
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
+ F M +EG + V+ G + AC +E G K Y + C +
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLK-YGFDSDVSVVNCFIT 186
Query: 361 LYSRAGRLEDALNVVENMPMK 381
+Y + G + A + + MP+K
Sbjct: 187 MYMKCGSVNYAQKLFDEMPVK 207
>gi|357501421|ref|XP_003620999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365545|gb|ABN09779.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496014|gb|AES77217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 601
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 166/448 (37%), Positives = 263/448 (58%), Gaps = 15/448 (3%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
TS + + + G + A F M++ +++ ++ G A +C G M+
Sbjct: 162 TSLVDMYVKFGDVGFARKVFDEMSVRSL----VSWTAVIVGYA----RC---GDMVEARK 210
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
G+ +V ++D Y K GRMDLA +FD MRVK+ +W +M+ GY GD++ A
Sbjct: 211 LFDGMVDRDVAAFNVMIDGYVKMGRMDLARDLFDKMRVKNVISWTSMVHGYSEDGDVDEA 270
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNACAN 227
+FD MP ++ +SW A++ G+ + G +AL+ F EM+ + VE + VT++SVL A A+
Sbjct: 271 RFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVAD 330
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ L +G W+H +V + +V VCN L+D+Y++CG I A+ VF+ M ++ SWN++
Sbjct: 331 LSALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNAL 390
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+ VNG EALE F M +EGF+P+ ++ T L+AC+H GL+E+G R F+ M++ +
Sbjct: 391 INGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACNHCGLVEEGRRCFEAMER-FG 449
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ P+IEHYGC++DL RAGRL++A +++ MP PNE++L S L AC D+ AER++
Sbjct: 450 IVPQIEHYGCMIDLLGRAGRLDEAEKLIQAMPYDPNEIILTSFLFACCYFEDVSRAERIL 509
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
K V ++ +YV+L N+YA +W ++ MK RG K+ S IE+ EF
Sbjct: 510 KVAVKMEKEGAGDYVMLRNLYATERRWADVEDVKEMMKKRGSNKEVAWSVIEVDGRFREF 569
Query: 468 MAGDRSHIES--EHIYSMLELLSFDLKL 493
+AG SH S E I S L L +K+
Sbjct: 570 VAGYYSHSHSHLEAIQSTLGQLWKHMKV 597
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAM 103
+ W + I +C++GR +A F M + N +T +++L AD + L LG
Sbjct: 282 VLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSA--LDLGGW 339
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+HG V + LD +V V AL+DMYAK G + A +VF+ M K + +WNA+I+GY
Sbjct: 340 VHGFVQRNQLD-GSVHVCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYG--- 395
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+NG K EALE F M G EP+ +T+ SVL+
Sbjct: 396 -----------------------VNGCAK-----EALEVFAMMLREGFEPNQITMTSVLS 427
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
AC + G + G + + ++ +IDL R G ++ A ++ Q M
Sbjct: 428 ACNHCGLVEEGRRCFEAMERFGIVPQIEHYGCMIDLLGRAGRLDEAEKLIQAM 480
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P T +L C+ G IH VLK F ++ V +L+D+Y + G + FAR+V
Sbjct: 121 PSSYTFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKV 180
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK----------EGFKPDG------ 316
F M R+LVSW ++IVG+A G + EA + F+ M +G+ G
Sbjct: 181 FDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLAR 240
Query: 317 -----------VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
+S+T + S G +++ FD M + + + ++ Y +
Sbjct: 241 DLFDKMRVKNVISWTSMVHGYSEDGDVDEARFLFDCMPE-----KNVLSWNAMIRGYCQN 295
Query: 366 GRLEDALNVV----ENMPMKPNEVVLGSLLAA 393
GR DAL + N+ ++ NEV + S+L A
Sbjct: 296 GRSHDALKLFCEMRGNVDVEMNEVTVVSVLPA 327
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 165/458 (36%), Positives = 257/458 (56%), Gaps = 39/458 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT---NPNHITFITLLSGCADFPSQCLFLGA 102
V W++ I R+ +A L F M G +P I + L CA L +G
Sbjct: 190 VTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDH--LRMGE 245
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H L+ K G+ ++ G +LL MYAK G
Sbjct: 246 QLHALLAKSGV-HADLTAGNSLLSMYAKAGL----------------------------- 275
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
I+ A+ +FDEM V+D +S++AL++G+V+ G EEA F++MQ VEPD T++S++
Sbjct: 276 --IDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLI 333
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC+++ L G H V+ + +CN LID+Y++CG I+ +RQVF M R +V
Sbjct: 334 PACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIV 393
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN++I G+ ++G EA F M GF PDGV+F L+ACSH+GL+ +G +F +M
Sbjct: 394 SWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVM 453
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
Y ++PR+EHY C+VDL SR G L++A +++MP++ + V +LL ACR +I L
Sbjct: 454 GHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDL 513
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
+++ + + +L P N+VLL+N+Y+A G++D A ++R K +G +K PG S IEI
Sbjct: 514 GKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEING 573
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F+ GD+SH +S IY L+ + +K GY P+T
Sbjct: 574 SLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDT 611
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 180/461 (39%), Gaps = 122/461 (26%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
M H PN+ TF L C+ G IH GL + ++ V TALLDMY
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADH--HCGRAIHRHAIHAGL-QADLFVSTALLDMY-- 55
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
++ + A +F MP RD ++W A+L G+
Sbjct: 56 -----------------------------VKCACLPDAAHIFATMPARDLVAWNAMLAGY 86
Query: 191 VKRGYFEEALECF--REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL------ 242
G + A+ +MQ+ + P+ T++++L A G L G +H Y +
Sbjct: 87 AHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHP 146
Query: 243 ----KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
K D V + L+D+Y++CG + +AR+VF M R V+W+++I GF + +
Sbjct: 147 NRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMT 206
Query: 299 EALEYFNSMQKEG---FKPDGVSFTGALTAC----------------------------- 326
+A F +M +G P S AL AC
Sbjct: 207 QAFLLFKAMLAQGLCFLSP--TSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGN 264
Query: 327 ------SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP- 379
+ AGLI+ + FD M VS Y +V Y + GR E+A V + M
Sbjct: 265 SLLSMYAKAGLIDQAIALFDEMAVKDTVS-----YSALVSGYVQNGRAEEAFLVFKKMQA 319
Query: 380 --MKPNEVVLGSLLAACR----------TKGDIILAERLMKYLVDLDPGVDSNYVL---L 424
++P+ + SL+ AC + G +I+ G+ S + L
Sbjct: 320 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR------------GLASETSICNAL 367
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+MYA G+ D + ++ M R I +++ G GIH
Sbjct: 368 IDMYAKCGRIDLSRQVFNMMPSRDIVS---WNTMIAGYGIH 405
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 162/453 (35%), Positives = 260/453 (57%), Gaps = 9/453 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAM 103
T+ W S IS + + EA F + + G + T ++L+ CAD S L G
Sbjct: 241 TISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMAS--LRRGKE 298
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H GL N VG AL++MY+K + A + FD + + + TWN +I GY
Sbjct: 299 VHAQAVVRGLHWN-TFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCN 357
Query: 164 DIESAVRMFDEMP----VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+E+ + +M + +W +++G V+ G+ E AL F EMQ S + PD T+
Sbjct: 358 QLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVG 417
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+L ACA + T+ G +H + ++Q ++ +V + L+D+Y++CG I+ A QV+ R+
Sbjct: 418 IILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNP 477
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
LVS N+++ +A++G E + F +M GF+PD V+F L++C HAG +E G +F
Sbjct: 478 NLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFF 537
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
D+M Y V+P ++HY CIVDL SRAGRL++A +V+ +P KP+ V+ G+LL C G+
Sbjct: 538 DLMT-YYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGN 596
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ L E + L++L+P NYVLLAN+YA G+W + R+ +K RG+ K PG S IE
Sbjct: 597 VELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIE 656
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
IH F++ D+SH ++E IY+ L+ L+ ++
Sbjct: 657 DREDIHVFLSCDKSHEKTEDIYTTLDNLNTHMR 689
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 145/329 (44%), Gaps = 66/329 (20%)
Query: 65 ALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTAL 124
A T ++L + T+ +LL C + L LG +H K G + V T L
Sbjct: 47 AAHHTHLSLLDKQIDSSTYASLLESC-----RTLNLGKQVHAHTLKTGF-HGHEFVETKL 100
Query: 125 LDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWT 184
L MY +FG +D A +VF VK MP R+ SWT
Sbjct: 101 LQMYGRFGCLDDANLVF----VK---------------------------MPQRNLYSWT 129
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
A+L+ V GYFEEAL F ++Q+ + ++ VL C + L +G +H V+K+
Sbjct: 130 AILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKR 189
Query: 245 --DFKDNVKV-----------CNTLIDLYSRCGCIEFARQVFQRMH--KRTLVSWNSIIV 289
D +K+ NT+I Y G +E A+++F +M + +SWNS+I
Sbjct: 190 CADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMIS 249
Query: 290 GFAVNGFVGEALEYFNS-MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY-R 347
G+A N EAL F + +EG + D + L AC+ + G K+++ +
Sbjct: 250 GYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRG-------KEVHAQ 302
Query: 348 VSPRIEHY-----GCIVDLYSRAGRLEDA 371
R H+ G +V++YS+ L+ A
Sbjct: 303 AVVRGLHWNTFVGGALVEMYSKCEDLKAA 331
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 268/454 (59%), Gaps = 7/454 (1%)
Query: 43 NPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
+PT+ W + I + S ++ F +M G P+++T+ L+ A +Q G
Sbjct: 76 SPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLVKASARLLNQ--ETG 133
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + K G + + + +L+ MYA G A VFD+++ K+ +WN+M+DGY +
Sbjct: 134 VSVHAHIIKTGHESDR-FIQNSLIHMYAACGNSMWAQKVFDSIQQKNVVSWNSMLDGYAK 192
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++ A + F+ M +D SW++L++G+VK G + EA+ F +MQ +G + + VT++SV
Sbjct: 193 CGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKANEVTMVSV 252
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT- 280
ACA++G L G I++Y++ + + +L+D+Y++CG IE A +F+R+ K
Sbjct: 253 SCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLIFRRVSKSQT 312
Query: 281 -LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
++ WN++I G A +G V E+L+ F MQ G PD V++ L AC+H GL+++ +F
Sbjct: 313 DVLIWNAVIGGLATHGLVEESLKLFKEMQIVGICPDEVTYLCLLAACAHGGLVKEAWFFF 372
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
+ + K ++P EHY C+VD+ +RAG+L A + MP +P +LG+LL+ C +
Sbjct: 373 ESLSKC-GMTPTSEHYACMVDVLARAGQLTTAYQFICQMPTEPTASMLGALLSGCINHRN 431
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ LAE + + L++L+P D Y+ L+NMYA +WD A +R M+ RG++K PG S +E
Sbjct: 432 LALAEIVGRKLIELEPNHDGRYIGLSNMYAVDKRWDDARSMREAMERRGVKKSPGFSFVE 491
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493
I +H F+A D++H +SE Y ML + + +KL
Sbjct: 492 ISGVLHRFIAHDKTHPDSEETYFMLNFVVYQMKL 525
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 134/279 (48%), Gaps = 35/279 (12%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GDI + R+F ++ SW ++ G+ ++L F +M GV PDY+T ++
Sbjct: 62 GDINYSYRVFSQLSSPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLV 121
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
A A + G+ +H +++K + + + N+LI +Y+ CG +A++VF + ++ +V
Sbjct: 122 KASARLLNQETGVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQQKNVV 181
Query: 283 SWNSIIVGFA--------------------------VNGFV-----GEALEYFNSMQKEG 311
SWNS++ G+A ++G+V EA+ F MQ G
Sbjct: 182 SWNSMLDGYAKCGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAG 241
Query: 312 FKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
K + V+ AC+H G +E G + Y I+ ++ ++ +VD+Y++ G +E+
Sbjct: 242 PKANEVTMVSVSCACAHMGALEKGRMIYKYIVDNGLPLTLVLQ--TSLVDMYAKCGAIEE 299
Query: 371 ALNVVENMPMKPNEVVL-GSLLAACRTKGDIILAERLMK 408
AL + + +V++ +++ T G + + +L K
Sbjct: 300 ALLIFRRVSKSQTDVLIWNAVIGGLATHGLVEESLKLFK 338
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 70/255 (27%)
Query: 261 SRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT 320
S G I ++ +VF ++ T+ SWN+II G++ + ++L F M + G PD +++
Sbjct: 59 SNSGDINYSYRVFSQLSSPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYP 118
Query: 321 GALTACS-----------HAGLIEDG------------------------LRYFDIMKKI 345
+ A + HA +I+ G + FD +++
Sbjct: 119 FLVKASARLLNQETGVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQQK 178
Query: 346 YRVS--------------------------PRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
VS + + ++D Y +AG +A+ + E M
Sbjct: 179 NVVSWNSMLDGYAKCGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQ 238
Query: 380 M---KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGK 433
K NEV + S+ AC G + + KY+V D G+ VL L +MYA G
Sbjct: 239 SAGPKANEVTMVSVSCACAHMGALEKGRMIYKYIV--DNGLPLTLVLQTSLVDMYAKCGA 296
Query: 434 WDGAGKI-RRTMKGR 447
+ A I RR K +
Sbjct: 297 IEEALLIFRRVSKSQ 311
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/456 (34%), Positives = 252/456 (55%), Gaps = 34/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ S + SGR EA F +M G P+ + +LS C
Sbjct: 177 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGD--------- 227
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
LD +V Y + M K+SF +++ Y + G
Sbjct: 228 --------LDSGEWIVK------YMEEMEMQ-----------KNSFVRTTLVNLYAKCGK 262
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A +FD M +D ++W+ ++ G+ + +E +E F +M ++PD +I+ L++
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L +G W + + +F N+ + N LID+Y++CG + +VF+ M ++ +V
Sbjct: 323 CASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+ I G A NG V + F +K G PDG +F G L C HAGLI+DGLR+F+ +
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y + +EHYGC+VDL+ RAG L+DA ++ +MPM+PN +V G+LL+ CR D LAE
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE 502
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++K L+ L+P NYV L+N+Y+ G+WD A ++R M +G++K PG S IE+ +
Sbjct: 503 TVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKV 562
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF+A D+SH S+ IY+ LE L +++L G+VP T
Sbjct: 563 HEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTT 598
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 171/336 (50%), Gaps = 36/336 (10%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F + HG + TF +L C S+ L G +H LV K G + ++V T+LL +
Sbjct: 99 FLSIRKHGLYLHGFTFPLVLKACTRASSRKL--GIDLHSLVVKCGFN-HDVAAMTSLLSI 155
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y+ GR++ A ++FDE+P R ++WTAL
Sbjct: 156 YSGSGRLN-------------------------------DAHKLFDEIPDRSVVTWTALF 184
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
+G+ G EA++ F++M GV+PD I+ VL+AC +VG L G WI +Y+ + + +
Sbjct: 185 SGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQ 244
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
N V TL++LY++CG +E AR VF M ++ +V+W+++I G+A N F E +E F M
Sbjct: 245 KNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM 304
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+E KPD S G L++C+ G ++ G ++ + + + ++D+Y++ G
Sbjct: 305 LQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGA 363
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ V + M K + V++ + ++ G + L+
Sbjct: 364 MARGFEVFKEMKEK-DIVIMNAAISGLAKNGHVKLS 398
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 107/214 (50%), Gaps = 7/214 (3%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+F + + +L+NGFV F E L+ F ++ G+ T VL AC +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
+G+ +H V+K F +V +L+ +YS G + A ++F + R++V+W ++ G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG---LRYFDIMKKIYR 347
+ +G EA++ F M + G KPD L+AC H G ++ G ++Y + M+
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
R +V+LY++ G++E A +V ++M K
Sbjct: 247 SFVRTT----LVNLYAKCGKMEKARSVFDSMVEK 276
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 113/268 (42%), Gaps = 42/268 (15%)
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T+ISV ++ + + L I+ ++ F N+ + TL ++ + F+ F
Sbjct: 18 TLISVACTVNHLKQIHVSL-INHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFP-- 74
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+ +NS+I GF N E L+ F S++K G G +F L AC+ A + G+
Sbjct: 75 ---NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGI 131
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP----------------- 379
++ K + + ++ +YS +GRL DA + + +P
Sbjct: 132 DLHSLVVKC-GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTS 190
Query: 380 -----------------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY- 421
+KP+ + +L+AC GD+ E ++KY+ +++ +S
Sbjct: 191 GRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR 250
Query: 422 VLLANMYAAVGKWDGAGKIRRTMKGRGI 449
L N+YA GK + A + +M + I
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMVEKDI 278
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/456 (35%), Positives = 248/456 (54%), Gaps = 34/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I + ++ EA + F +M G P ++ + L CAD L G I
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGD--LERGRFI 359
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H L +L LDRN +V N++I Y + +
Sbjct: 360 HKLSVELELDRNVSVV--------------------------------NSLISMYCKCKE 387
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+++A MF ++ R +SW A++ GF + G EAL F +MQ V+PD T +SV+ A
Sbjct: 388 VDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITA 447
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
A + WIH V++ NV V L+D+Y++CG I AR +F M +R + +W
Sbjct: 448 IAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTW 507
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G+ +G ALE F MQK +P+GV+F ++ACSH+GL+E GL+ F +MK+
Sbjct: 508 NAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKE 567
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P ++HYG +VDL RAGRL +A + + MP+KP V G++L AC+ ++ AE
Sbjct: 568 NYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAE 627
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++ + L +L+P +VLLAN+Y A W+ G++R +M +G++K PG S +EI + +
Sbjct: 628 KVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEV 687
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
H F +G +H S+ IY+ LE L +K GYVP+T
Sbjct: 688 HSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDT 723
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 205/431 (47%), Gaps = 77/431 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTR-MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + ++ + ++G +A ALE M P+ IT +++L + + + +G I
Sbjct: 202 VSWNTIVAGYSQNG-MARMALEMVNLMCEENLKPSFITIVSVLPAVSAL--RLIRIGKEI 258
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + G D + V + TAL+DMYAK G
Sbjct: 259 HGYAMRAGFD-SLVNIATALVDMYAKC-------------------------------GS 286
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+++A +FD M R+ +SW ++++ +V+ +EA+ F++M GV+P V+++ L+A
Sbjct: 287 LKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHA 346
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L G +IH+ ++ + NV V N+LI +Y +C ++ A +F ++ RT+VSW
Sbjct: 347 CADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSW 406
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS------HAGLIEDGLRY 338
N++I+GFA NG EAL YF+ MQ KPD ++ +TA + HA I +
Sbjct: 407 NAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 339 FDIMKKIYRVSPRIEHYG------------------------CIVDLYSRAGRLEDALNV 374
+ K ++ + ++ Y ++D Y G + AL +
Sbjct: 467 NCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALEL 526
Query: 375 VENM---PMKPNEVVLGSLLAACRTKGDI---ILAERLMKYLVDLDPGVDSNYVLLANMY 428
E M ++PN V S+++AC G + + +MK ++P +D +Y + ++
Sbjct: 527 FEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMD-HYGAMVDLL 585
Query: 429 AAVGK----WD 435
G+ WD
Sbjct: 586 GRAGRLNEAWD 596
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 139/304 (45%), Gaps = 35/304 (11%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F RM P F LL C D L +G IHGL+ K G LD+
Sbjct: 123 FVRMRDDEVEPVVYNFTYLLKVCGDEAE--LRVGKEIHGLLVKSGFS----------LDL 170
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
+A G ++ Y + + A ++FD MP RD +SW ++
Sbjct: 171 FAMTGLENM----------------------YAKCRQVHEARKVFDRMPERDLVSWNTIV 208
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
G+ + G ALE M ++P ++TI+SVL A + + + IG IH Y ++ F
Sbjct: 209 AGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFD 268
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
V + L+D+Y++CG ++ AR +F M +R +VSWNS+I + N EA+ F M
Sbjct: 269 SLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKM 328
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
EG KP VS GAL AC+ G +E G R+ + + + ++ +Y +
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVELELDRNVSVVNSLISMYCKCKE 387
Query: 368 LEDA 371
++ A
Sbjct: 388 VDTA 391
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 149/338 (44%), Gaps = 52/338 (15%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
++ + R G ++ A R+F+ + + + + +L GF K ++AL+ F M+ VEP
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPV 134
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+L C + L +G IH ++K F ++ L ++Y++C + AR+VF
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFD 194
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
RM +R LVSWN+I+ G++ NG ALE N M +E KP ++ L A S
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVS------- 247
Query: 335 GLRYFDIMKKIYRVSPR------IEHYGCIVDLYSRAGRLEDALNVVENM---------- 378
LR I K+I+ + R + +VD+Y++ G L+ A + + M
Sbjct: 248 ALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNS 307
Query: 379 ------------------------PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
+KP +V + L AC GD+ + K V+L+
Sbjct: 308 MIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELE 367
Query: 415 PGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
+D N + L +MY + D A + ++ R I
Sbjct: 368 --LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTI 403
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 166/459 (36%), Positives = 260/459 (56%), Gaps = 34/459 (7%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V WT I + +G I +A F M G P+ IT++ +++ CA S L
Sbjct: 322 VRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACA--ISANLNHA 379
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IH V G +++V TAL+ MYAK G
Sbjct: 380 REIHSQVDIAGFG-TDLLVSTALVHMYAKCGA---------------------------- 410
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
I+ A ++FD MP RD +SW+A++ +V+ GY EA E F M+ S +EPD VT I++
Sbjct: 411 ---IKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINL 467
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
LNAC ++G L +G+ I+ +K D +V + N LI + ++ G +E AR +F M +R +
Sbjct: 468 LNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDV 527
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
++WN++I G++++G EAL F+ M KE F+P+ V+F G L+ACS AG +++G R+F
Sbjct: 528 ITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTY 587
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
+ + + P ++ YGC+VDL RAG L++A ++++MP+KP + SLL ACR G++
Sbjct: 588 LLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLD 647
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
+AER + + +DP + YV L++MYAA G W+ K+R+ M+ RGI+K+ G + IE+
Sbjct: 648 VAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVA 707
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F+ DRSH IY+ L L +K GY+P T
Sbjct: 708 GKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPIT 746
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 177/391 (45%), Gaps = 67/391 (17%)
Query: 55 HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLD 114
+ +SG +A F RM G PN I+F+++L GC + + L G +H GL
Sbjct: 234 YAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGC--WTPEALAWGKAVHAQCMNAGL- 290
Query: 115 RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDE 174
+++ V T+L+ MY G IE A R+FD
Sbjct: 291 VDDIRVATSLIRMYTTCG-------------------------------SIEGARRVFDN 319
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
M VRD +SWT ++ G+ + G E+A F MQ G++PD +T + ++NACA L
Sbjct: 320 MKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHA 379
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
IH V F ++ V L+ +Y++CG I+ ARQVF M +R +VSW+++I + N
Sbjct: 380 REIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVEN 439
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-------------- 340
G+ EA E F+ M++ +PDGV++ L AC H G ++ G+ +
Sbjct: 440 GYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLG 499
Query: 341 ----IMKKIYRVSPRIEH------------YGCIVDLYSRAGRLEDALNVVENM---PMK 381
IM + R + + ++ YS G +AL + + M +
Sbjct: 500 NALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFR 559
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVD 412
PN V +L+AC G + R YL++
Sbjct: 560 PNSVTFVGVLSACSRAGFVDEGRRFFTYLLE 590
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 171/358 (47%), Gaps = 40/358 (11%)
Query: 24 NLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITF 83
N+T QI N V W + I+ + + G + EA F +M G P+ ITF
Sbjct: 107 NVTEARQIFDSVEN-----KTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITF 161
Query: 84 ITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDA 143
+++L C+ P+ L G +H V G ++ +GTAL+ MY K G MD A VFD
Sbjct: 162 LSVLDACSS-PAG-LNWGKEVHAQVVTAGF-VSDFRIGTALVSMYVKGGSMDDARQVFDG 218
Query: 144 MRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF 203
+ ++ T+N M+ GY + GD +E+A E F
Sbjct: 219 LHIRDVSTFNVMVGGYAKSGD-------------------------------WEKAFELF 247
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
MQ G++P+ ++ +S+L+ C L G +H + D+++V +LI +Y+ C
Sbjct: 248 YRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTC 307
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
G IE AR+VF M R +VSW +I G+A NG + +A F +MQ+EG +PD +++ +
Sbjct: 308 GSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIM 367
Query: 324 TACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
AC+ + + R I + +V +Y++ G ++DA V + MP +
Sbjct: 368 NACAISANLNHA-REIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRR 424
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 190/400 (47%), Gaps = 51/400 (12%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
+ N +I Y G++ A ++FD + + ++W AL+ G+ + G+ +EA FR+M
Sbjct: 93 YELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDE 152
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G+EP +T +SVL+AC++ L G +H V+ F + ++ L+ +Y + G ++ A
Sbjct: 153 GLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDA 212
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL------ 323
RQVF +H R + ++N ++ G+A +G +A E F MQ+ G KP+ +SF L
Sbjct: 213 RQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTP 272
Query: 324 ----------TACSHAGLIEDGLRYFDIMKKIYRVSPRIE---------------HYGCI 358
C +AGL++D +R + ++Y IE + +
Sbjct: 273 EALAWGKAVHAQCMNAGLVDD-IRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVM 331
Query: 359 VDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
++ Y+ G +EDA + M ++P+ + ++ AC ++ A R + VD+
Sbjct: 332 IEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHA-REIHSQVDI-A 389
Query: 416 GVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL--SSIEIGSGIHEFMA- 469
G ++ ++ L +MYA G A ++ M R + + + +E G G F
Sbjct: 390 GFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETF 449
Query: 470 --GDRSHIESEHIYSMLELLSFDLKLCGYVPETVAG-ELY 506
RS+IE + + + + LL+ CG++ G E+Y
Sbjct: 450 HLMKRSNIEPDGV-TYINLLN----ACGHLGALDVGMEIY 484
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 52/283 (18%)
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G D T + + C + +G + ++++ + N+ NTLI LYS CG + A
Sbjct: 52 GNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEA 111
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-- 327
RQ+F + +T+V+WN++I G+A G V EA F M EG +P ++F L ACS
Sbjct: 112 RQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSP 171
Query: 328 ---------HA------------------------GLIEDGLRYFDIMKKIYRVSPRIEH 354
HA G ++D + FD + I VS
Sbjct: 172 AGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGL-HIRDVST---- 226
Query: 355 YGCIVDLYSRAGRLEDALNV---VENMPMKPNEVVLGSLLAACRTK-----GDIILAERL 406
+ +V Y+++G E A + ++ + +KPN++ S+L C T G + A+ +
Sbjct: 227 FNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCM 286
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
LVD D V ++ L MY G +GA ++ MK R +
Sbjct: 287 NAGLVD-DIRVATS---LIRMYTTCGSIEGARRVFDNMKVRDV 325
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/451 (37%), Positives = 255/451 (56%), Gaps = 34/451 (7%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
T+ IS + +G EA F + G PN +T ++L CA S L LG +H +
Sbjct: 449 TAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALAS--LKLGKELHCDI 506
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
K GL+ N VG+++ MYAK GR+DLA
Sbjct: 507 LKKGLE-NVCQVGSSITYMYAKSGRLDLA------------------------------- 534
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
+ F MPV+D++ W ++ F + G E A++ FR+M SG + D V++ + L+ACAN
Sbjct: 535 YQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANY 594
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
L G +H +V++ F + V +TLID+YS+CG + AR VF M + VSWNSII
Sbjct: 595 PALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSII 654
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
+ +G E L+ F+ M + G +PD V+F ++AC HAGL+++G+ YF M + Y +
Sbjct: 655 AAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGI 714
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMK 408
R+EH+ C+VDLY RAGRL +A + +++MP P+ GSLL ACR G++ LA+ K
Sbjct: 715 CARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASK 774
Query: 409 YLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFM 468
+LV+LDP YVLL+N++A G+W+ K+R MK +G+QK PG S I++ G H F
Sbjct: 775 HLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFS 834
Query: 469 AGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
A D H +S IY +L+ L +L+ GYVP+
Sbjct: 835 AADGCHPQSVEIYLILKNLLLELRKHGYVPQ 865
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 195/437 (44%), Gaps = 74/437 (16%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
++ W I G A + F RM P+ TF ++ C + + L M+
Sbjct: 142 SLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNN--VPLCKMV 199
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H L +G MDL F +++I Y G
Sbjct: 200 HELARSMGF-------------------HMDL-------------FIGSSLIKLYTDNGY 227
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I A +FDE+PVRD I W +LNG+VK G F AL F+EM+ S V+P+ V+ + +L+
Sbjct: 228 IHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSV 287
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA G + G+ +H V++ F+ + V NT+I +YS+CG + AR++F M + V+W
Sbjct: 288 CATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTW 347
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF---------TGALTACS--HAGLIE 333
N +I G+ NGF EA+ F +M G K D ++F +G+L C H+ ++
Sbjct: 348 NGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVR 407
Query: 334 DGLRYFDIMKK-----IYRVSPRIE------HYGCIVDL---------YSRAGRLEDALN 373
G+ FD+ K IY +E +VD+ Y G +ALN
Sbjct: 408 HGVP-FDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALN 466
Query: 374 VVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANM 427
+ + M PN + + S+L AC + L + L + L G+++ + + M
Sbjct: 467 LFRWLIQEGMVPNCLTMASVLPACAALASLKLGKEL--HCDILKKGLENVCQVGSSITYM 524
Query: 428 YAAVGKWDGAGKIRRTM 444
YA G+ D A + R M
Sbjct: 525 YAKSGRLDLAYQFFRRM 541
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 180/388 (46%), Gaps = 38/388 (9%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV W I+ + ++G EA F M G + ITF + L S L +
Sbjct: 344 TVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSV--LKSGSLKYCKEV 401
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + + G+ D+Y K +A++D Y + GD
Sbjct: 402 HSYIVRHGVP----------FDVYLK----------------------SALVDIYFKGGD 429
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A + F + + D TA+++G+V G EAL FR + G+ P+ +T+ SVL A
Sbjct: 430 VEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPA 489
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA + +L +G +H +LK+ ++ +V +++ +Y++ G ++ A Q F+RM + V W
Sbjct: 490 CAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCW 549
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N +IV F+ NG A++ F M G K D VS + L+AC++ + G + +
Sbjct: 550 NLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVR 609
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+S ++D+YS+ G+L A +V + M K NEV S++AA G
Sbjct: 610 NSFISDTFVA-STLIDMYSKCGKLALARSVFDMMDWK-NEVSWNSIIAAYGNHGRPRECL 667
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVG 432
L +V + G+ ++V + +A G
Sbjct: 668 DLFHEMV--EAGIQPDHVTFLVIMSACG 693
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 162/345 (46%), Gaps = 45/345 (13%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V + W ++ + ++G A F M PN ++F+ LLS CA + G
Sbjct: 240 VRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCAT--RGIVRAG 297
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+HGLV + G + + + T ++ MY+K G + FDA ++
Sbjct: 298 IQLHGLVIRSGFESDPTVANT-IITMYSKCGNL------FDARKI--------------- 335
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
FD MP D ++W L+ G+V+ G+ +EA+ F+ M SGV+ D +T S
Sbjct: 336 ----------FDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASF 385
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L + G+L +H Y+++ +V + + L+D+Y + G +E A + FQ+ +
Sbjct: 386 LPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDV 445
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFD 340
++I G+ +NG EAL F + +EG P+ ++ L AC+ ++ G + D
Sbjct: 446 AVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCD 505
Query: 341 IMKK----IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
I+KK + +V I + +Y+++GRL+ A MP+K
Sbjct: 506 ILKKGLENVCQVGSSITY------MYAKSGRLDLAYQFFRRMPVK 544
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 4/250 (1%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+F + + ++ W L+ GF G F+ AL F M S V PD T V+ AC +
Sbjct: 133 LFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNN 192
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
+ + +H F ++ + ++LI LY+ G I A+ +F + R + WN ++ G
Sbjct: 193 VPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNG 252
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKKIYRVS 349
+ NG AL F M+ KP+ VSF L+ C+ G++ G++ +++ +
Sbjct: 253 YVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESD 312
Query: 350 PRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKY 409
P + + I+ +YS+ G L DA + + MP + + V L+A G A L K
Sbjct: 313 PTVAN--TIITMYSKCGNLFDARKIFDIMP-QTDTVTWNGLIAGYVQNGFTDEAVALFKA 369
Query: 410 LVDLDPGVDS 419
+V +DS
Sbjct: 370 MVTSGVKLDS 379
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 94/252 (37%), Gaps = 54/252 (21%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
IH VL ++ + + ++ +Y C + +F R+ + WN +I GF++ G
Sbjct: 98 IHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGC 157
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY- 355
AL +F M PD +F + AC GL + K ++ ++ + +
Sbjct: 158 FDFALMFFFRMLGSNVAPDKYTFPYVIKACG-------GLNNVPLCKMVHELARSMGFHM 210
Query: 356 -----GCIVDLYSRAGRLEDALNVVENMP------------------------------- 379
++ LY+ G + DA + + +P
Sbjct: 211 DLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMR 270
Query: 380 ---MKPNEVVLGSLLAACRTKGDIILAERLMKYLV----DLDPGVDSNYVLLANMYAAVG 432
+KPN V LL+ C T+G + +L ++ + DP V + + MY+ G
Sbjct: 271 NSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTII---TMYSKCG 327
Query: 433 KWDGAGKIRRTM 444
A KI M
Sbjct: 328 NLFDARKIFDIM 339
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 53/155 (34%), Gaps = 34/155 (21%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ + GR E F M G P+H+TF+ ++S C
Sbjct: 648 VSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACG-------------- 693
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
GL + + + Y RM+ + M+D Y R G +
Sbjct: 694 ----HAGLVDEGIYYFRCMTEEYGICARME---------------HFACMVDLYGRAGRL 734
Query: 166 ESAVRMFDEMPVR-DAISWTALLNGFVKRGYFEEA 199
A MP DA +W +LL G E A
Sbjct: 735 HEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELA 769
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 158/444 (35%), Positives = 255/444 (57%), Gaps = 34/444 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + + +S ++ L +T+M G P+ TF LL GC + G +HG
Sbjct: 81 WNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKGCTRLEWRKT--GFCVHGK 138
Query: 108 VCKLGLDRNN------------------------------VMVGTALLDMYAKFGRMDLA 137
V K G + N+ V+ +AL YA+ G + +A
Sbjct: 139 VLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYARRGELGVA 198
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
+FD M VK +WN MI GY++ G++E+A +FDE P +D ++W ++ G+V RG
Sbjct: 199 RQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRGEQR 258
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD-NVKVCNTL 256
+ALE F EM+ G PD VT++S+L+ACA++G L +G +H + + D +V + N L
Sbjct: 259 QALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSISEMTRGDLSVLLGNAL 318
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPD 315
+D+Y++CG IE A QVF++M ++ + +WNS+I G A +G E+++ F MQ + KP+
Sbjct: 319 VDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEMQALKNIKPN 378
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
++F G + ACSHAG +E+G RYF +M++ Y + P + H+GC+VDL RAG L +A ++
Sbjct: 379 EITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFELI 438
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
M ++PN ++ +LL ACR G++ L + L+ L +YVLL+N+YA+ G+WD
Sbjct: 439 AKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDESGDYVLLSNIYASAGEWD 498
Query: 436 GAGKIRRTMKGRGIQKKPGLSSIE 459
GA ++R+ M G++K+ G S IE
Sbjct: 499 GAEEVRKLMDDGGVRKEAGRSLIE 522
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 141/294 (47%), Gaps = 18/294 (6%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G I A ++F ++ D W ++ G + + + + +M+ GV+PD T +L
Sbjct: 61 GAINYAHQVFAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLL 120
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
C + G +H VLK F+ N V NTLI +S CG + AR +F + +R++V
Sbjct: 121 KGCTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVV 180
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SW+++ G+A G +G A + F+ M + D VS+ +T G +E+ FD
Sbjct: 181 SWSALTAGYARRGELGVARQIFDEMPVK----DLVSWNVMITGYVKNGEMENARTLFDEA 236
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE---NMPMKPNEVVLGSLLAACRTKGD 399
+ V+ + ++ Y G AL + E N+ P+EV + SLL+AC GD
Sbjct: 237 PEKDVVT-----WNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGD 291
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLAN----MYAAVGKWDGAGKIRRTMKGRGI 449
+ + +L + ++ G S VLL N MYA G + A ++ + M+ + +
Sbjct: 292 LQVGRKLHCSISEMTRGDLS--VLLGNALVDMYAKCGSIEIALQVFKKMREKDV 343
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 34/255 (13%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I+ + G +A F M G P+ +T ++LLS CAD L +G +
Sbjct: 241 VVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGD--LQVGRKL 298
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + ++ +V++G AL+DMYAK G +++A VF MR K TWN++I G G
Sbjct: 299 HCSISEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGH 358
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
E ++++F EM + ++P+ +T + V+ A
Sbjct: 359 AEESIKLFAEMQA------------------------------LKNIKPNEITFVGVIVA 388
Query: 225 CANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLV 282
C++ G + G + + ++ D + N+ ++DL R G + A ++ +M + +
Sbjct: 389 CSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIEPNAI 448
Query: 283 SWNSIIVGFAVNGFV 297
W +++ V+G V
Sbjct: 449 IWRTLLGACRVHGNV 463
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/367 (42%), Positives = 226/367 (61%), Gaps = 2/367 (0%)
Query: 124 LLDMYAKFGR--MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
L+D Y K G +D A +FD M + WN+MIDGY R G ++ A +F+EMP R+ I
Sbjct: 218 LIDGYGKQGGAGVDRARELFDQMPERDLVCWNSMIDGYARHGRMDEARSLFEEMPERNVI 277
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
SW+ +++G V G +EALE F+ M G+ PD + + ++ACA +G L G W+H Y+
Sbjct: 278 SWSIVIDGHVSCGEAKEALEYFQSMLRCGLRPDRIAAVGAVSACAQLGALEQGRWLHSYL 337
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
K+ +V V LID+Y +CGC++ A +F+ M +R++V+WN +IVG +GF +A+
Sbjct: 338 EKKKLLSDVVVQTALIDMYVKCGCLDLAMLIFESMAERSVVTWNVMIVGLGTHGFGLDAV 397
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
F+ M+ E D +S G LTAC+HAGL+ +GL F MKK + + P++EHYG +VDL
Sbjct: 398 TLFHRMEAESVAVDDLSVLGMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDL 457
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY 421
RAGRL+ A + +E MPM+P + GSLLAACR+ + LAE ++ L DL Y
Sbjct: 458 LGRAGRLDQARHAIETMPMEPTPELWGSLLAACRSHSCVELAELSVERLADLGADDSGVY 517
Query: 422 VLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIY 481
VLL+N+YA G W +IR+ M G++K G S IE+ IHEF+ G S+I + +Y
Sbjct: 518 VLLSNIYADEGMWGDVLRIRKLMSDEGMRKDIGRSVIEVDGEIHEFVNGVGSYICKDEMY 577
Query: 482 SMLELLS 488
ML LS
Sbjct: 578 LMLWNLS 584
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 154/333 (46%), Gaps = 44/333 (13%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W ++I H R A L F RM G P+ TF +L C P G ++H
Sbjct: 82 WNTAIRLHA-PARPRAALLYFARMRRCGVRPDAYTFPAVLKACGCAPG--CRAGLLVHAE 138
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR--VKSSFTWNAMIDGYMRRGDI 165
+ GL + V AL+ Y + + VFD + +WN+M+ GY+ G++
Sbjct: 139 AVRRGLAADLFTV-NALISFYCRILDIRSGRKVFDEAGGVSRDLVSWNSMVAGYVGCGEM 197
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A MFDEMP +D SW L++G+ K+G
Sbjct: 198 GLAQEMFDEMPQKDTFSWATLIDGYGKQG------------------------------- 226
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
G G+ R + Q + ++ N++ID Y+R G ++ AR +F+ M +R ++SW+
Sbjct: 227 ------GAGVDRARELFDQMPERDLVCWNSMIDGYARHGRMDEARSLFEEMPERNVISWS 280
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+I G G EALEYF SM + G +PD ++ GA++AC+ G +E G ++K
Sbjct: 281 IVIDGHVSCGEAKEALEYFQSMLRCGLRPDRIAAVGAVSACAQLGALEQGRWLHSYLEKK 340
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+S + ++D+Y + G L+ A+ + E+M
Sbjct: 341 KLLSDVVVQTA-LIDMYVKCGCLDLAMLIFESM 372
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 112/250 (44%), Gaps = 40/250 (16%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W+ I H G EA F M G P+ I + +S CA + L G +
Sbjct: 276 VISWSIVIDGHVSCGEAKEALEYFQSMLRCGLRPDRIAAVGAVSACAQLGA--LEQGRWL 333
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K L ++V+V TAL+DMY K G +DLA ++F++M +S TWN MI
Sbjct: 334 HSYLEKKKL-LSDVVVQTALIDMYVKCGCLDLAMLIFESMAERSVVTWNVMI-------- 384
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
G G+ +A+ F M+ V D ++++ +L A
Sbjct: 385 -----------------------VGLGTHGFGLDAVTLFHRMEAESVAVDDLSVLGMLTA 421
Query: 225 CANVGTLGIGLWI-HRYVLKQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRM-HKRT 280
C + G + GL I HR +K+DF + KV + L+DL R G ++ AR + M + T
Sbjct: 422 CTHAGLVSEGLEIFHR--MKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPT 479
Query: 281 LVSWNSIIVG 290
W S++
Sbjct: 480 PELWGSLLAA 489
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 250/453 (55%), Gaps = 34/453 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I H ++G ++ F M G +P+ T +LL CA + L G IHG
Sbjct: 470 WNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARL--KFLRCGKEIHGF 527
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ + GL+ + +G +L+ +Y + M L ++FD M KS WN MI G+ +
Sbjct: 528 MLRNGLELDE-FIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQ------ 580
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+E+P EAL+ FR+M G++P + + VL AC+
Sbjct: 581 -----NELPC--------------------EALDTFRQMLSGGIKPQEIAVTGVLGACSQ 615
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
V L +G +H + LK ++ V LID+Y++CGC+E ++ +F R++++ WN I
Sbjct: 616 VSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVI 675
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+ ++G +A+E F MQ +G +PD +F G L AC+HAGL+ +GL+Y M+ +Y
Sbjct: 676 IAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYG 735
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
V P++EHY C+VD+ RAG+L +AL +V MP +P+ + SLL++CR GD+ + E +
Sbjct: 736 VKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVS 795
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
K L++L+P NYVLL+N+YA +GKWD K+R+ MK G+ K G S IEIG ++ F
Sbjct: 796 KKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRF 855
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ D S ES+ I L + GY P+T
Sbjct: 856 LVSDGSLSESKKIQQTWIKLEKKISKIGYKPDT 888
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 172/413 (41%), Gaps = 76/413 (18%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTL---HGTNPNHITFITLLSGCADFPSQCLFLGA 102
V W S + +G E F R+ + G P+ T +T++ CA + +G
Sbjct: 262 VSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGE--VRMGM 319
Query: 103 MIHGLVCKLGLDR----NNVMV-----------GTALLDM---------------YAKFG 132
++HGL KLG+ NN +V AL DM Y+K G
Sbjct: 320 VVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEG 379
Query: 133 ------------------RMDLATVV----------------------FDAMRVKSSFTW 152
R++ TV+ F +K
Sbjct: 380 DFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVA 439
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
NA + Y + ++ A R+F M + SW AL+ + G+ ++L+ F M SG++
Sbjct: 440 NAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMD 499
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD TI S+L ACA + L G IH ++L+ + + + +L+ LY +C + + +
Sbjct: 500 PDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLI 559
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F +M ++LV WN +I GF+ N EAL+ F M G KP ++ TG L ACS +
Sbjct: 560 FDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSAL 619
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
G K + +S ++D+Y++ G +E + N+ + + K V
Sbjct: 620 RLGKEVHSFALKAH-LSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAV 671
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 157/353 (44%), Gaps = 47/353 (13%)
Query: 27 TTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT----NPNHIT 82
T P+ S+ ++ T +P +Q ++ C SG + +A +GT + +
Sbjct: 40 TVPKSSLTSHTK--THSPILQRLHNL---CDSGNLNDALNLLHSHAQNGTVSSSDISKEA 94
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
LL C + + +G +H LV RN+V++ T ++ MY+ G + VFD
Sbjct: 95 IGILLRACGHHKN--IHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFD 152
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
A + K F +NA LL+G+ + F +A+
Sbjct: 153 AAKEKDLFLYNA-------------------------------LLSGYSRNALFRDAISL 181
Query: 203 FREM-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
F E+ + + PD T+ V ACA V + +G +H LK + V N LI +Y
Sbjct: 182 FLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYG 241
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM---QKEGFKPDGVS 318
+CG +E A +VF+ M R LVSWNS++ + NG GE F + ++EG PD +
Sbjct: 242 KCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVAT 301
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
+ AC+ G + G+ + K+ ++ + +VD+YS+ G L +A
Sbjct: 302 MVTVIPACAAVGEVRMGMVVHGLAFKL-GITEEVTVNNSLVDMYSKCGYLGEA 353
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 103/183 (56%), Gaps = 4/183 (2%)
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
+F NA+I Y + G +ESAV++F+ M R+ +SW +++ + G F E F+ + I
Sbjct: 230 AFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLI 289
Query: 209 S---GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
S G+ PD T+++V+ ACA VG + +G+ +H K + V V N+L+D+YS+CG
Sbjct: 290 SEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGY 349
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALT 324
+ AR +F + +VSWN+II G++ G E MQ+ E + + V+ L
Sbjct: 350 LGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLP 409
Query: 325 ACS 327
ACS
Sbjct: 410 ACS 412
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 141/343 (41%), Gaps = 65/343 (18%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W I+ ++ EA F +M G P I +L C+ + L LG +H
Sbjct: 569 VCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSA--LRLGKEVH 626
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
K L + V AL+DMYAK G M+ + +FD + K WN +I GY G
Sbjct: 627 SFALKAHLSED-AFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHG 685
Query: 166 ESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQ-ISGVEPD---YVT 217
A+ +F+ M + D+ ++ +L G E L+ +MQ + GV+P Y
Sbjct: 686 LKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYAC 745
Query: 218 II-----------------------------SVLNACANVGTLGIGLWIHRYVLKQDFKD 248
++ S+L++C N G L IG + + +L+ + +
Sbjct: 746 VVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELE-PN 804
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRM-----HKRTLVSWNSI---IVGFAV-NGFVGE 299
+ L +LY+ G + R+V QRM HK SW I + F V +G + E
Sbjct: 805 KAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSE 864
Query: 300 A-------LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
+ ++ + K G+KPD T+C L E+G
Sbjct: 865 SKKIQQTWIKLEKKISKIGYKPD--------TSCVLHELEEEG 899
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 8/239 (3%)
Query: 221 VLNACANVGTLGIGLWIHRYV-LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+L AC + + +G +H V +++V + +I +YS CG +R VF ++
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYF-NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
L +N+++ G++ N +A+ F + PD + AC+ +E G
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
+ K S ++ +Y + G +E A+ V E M + N V S++ AC G
Sbjct: 218 HALALKAGGFSDAFVG-NALIAMYGKCGFVESAVKVFETMRNR-NLVSWNSVMYACSENG 275
Query: 399 DIILAERLMK-YLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
+ K L+ + G+ + +A M + G++R M G+ K G++
Sbjct: 276 GFGECCGVFKRLLISEEEGLVPD---VATMVTVIPACAAVGEVRMGMVVHGLAFKLGIT 331
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 257/469 (54%), Gaps = 38/469 (8%)
Query: 65 ALEF-TRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTA 123
+LEF RM +P+ T+ +L+ A F S G + + K G + V + T
Sbjct: 862 SLEFYVRMLRDSVSPSSYTYSSLVQASA-FASG---FGESLQAHIWKFGFGFH-VQIQTT 916
Query: 124 LLDMYAKFGRMDLATVVFD-------------------------------AMRVKSSFTW 152
L+ Y+ GR+ A VFD M K+ TW
Sbjct: 917 LIGFYSASGRIREARKVFDEMPERDDVTWTTMVSAYRQVLDMDSANSLANQMPEKNEATW 976
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N +IDGY R G++E A +F++MPV+D ISWT ++NG+ + + EA+ F +M G+
Sbjct: 977 NCLIDGYTRLGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREAIAVFYKMMEEGII 1036
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD VT+ +V++ACA++G L IG +H Y ++ F +V + + L+D+YS+CG +E A V
Sbjct: 1037 PDEVTMSTVISACAHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERALLV 1096
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F + K+ L WNSII G A +GF EAL+ F M+ E KP+ V+F TAC+HAGL+
Sbjct: 1097 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLV 1156
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
E+G R + M Y + +EHYGC+V L+S+AG + +AL ++ +M +PN V+ G+LL
Sbjct: 1157 EEGRRIYRSMIDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLD 1216
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
CR ++ +AE L+ L+P Y LL +MYA +W +IR M+ GI+K
Sbjct: 1217 GCRIHKNLEIAEIAFNKLMILEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKI 1276
Query: 453 -PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
PG SSI I H F A D+SH S+ + +L+ + + L GYV ET
Sbjct: 1277 CPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYEQMGLAGYVQET 1325
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 147/393 (37%), Gaps = 115/393 (29%)
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFR 204
+ ++ + N I ++ AV +M + + AL+ GFV + +LE +
Sbjct: 808 QTQNCYLMNQFITACSSFNRLDLAVSFMTQMQKPNVFVYNALIKGFVTCSHPIRSLEFYV 867
Query: 205 EMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
M V P T S++ A A G L H + K F +V++ TLI YS G
Sbjct: 868 RMLRDSVSPSSYTYSSLVQASAFASGFGESLQAH--IWKFGFGFHVQIQTTLIGFYSASG 925
Query: 265 CIEFARQVFQRMHKR------TLVS-------------------------WNSIIVGFAV 293
I AR+VF M +R T+VS WN +I G+
Sbjct: 926 RIREARKVFDEMPERDDVTWTTMVSAYRQVLDMDSANSLANQMPEKNEATWNCLIDGYTR 985
Query: 294 NGFVGEALEYFNSM-------------------------------QKEGFKPDGVSFTGA 322
G + A FN M +EG PD V+ +
Sbjct: 986 LGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREAIAVFYKMMEEGIIPDEVTMSTV 1045
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPR----IEHY--GCIVDLYSRAGRLEDALNVVE 376
++AC+H G++E G K+++ + + ++ Y +VD+YS+ G LE AL V
Sbjct: 1046 ISACAHLGVLEIG-------KEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERALLVFF 1098
Query: 377 NMP----------------------------------MKPNEVVLGSLLAACRTKGDIIL 402
N+P +KPN V S+ AC G +
Sbjct: 1099 NLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEE 1158
Query: 403 AERLMKYLVDLDPGVDSN---YVLLANMYAAVG 432
R+ + ++D D + SN Y + ++++ G
Sbjct: 1159 GRRIYRSMID-DYSIVSNVEHYGCMVHLFSKAG 1190
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 92/209 (44%), Gaps = 7/209 (3%)
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
++K N + N I S ++ A +M K + +N++I GF +
Sbjct: 803 MIKTSQTQNCYLMNQFITACSSFNRLDLAVSFMTQMQKPNVFVYNALIKGFVTCSHPIRS 862
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
LE++ M ++ P +++ + A + A + L+ I K + +I+ ++
Sbjct: 863 LEFYVRMLRDSVSPSSYTYSSLVQASAFASGFGESLQAH-IWKFGFGFHVQIQ--TTLIG 919
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
YS +GR+ +A V + MP + ++V ++++A R D+ A L + + + ++
Sbjct: 920 FYSASGRIREARKVFDEMPER-DDVTWTTMVSAYRQVLDMDSANSLANQMPEKN---EAT 975
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+ L + Y +G + A + M + I
Sbjct: 976 WNCLIDGYTRLGNLELAESLFNQMPVKDI 1004
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/446 (36%), Positives = 264/446 (59%), Gaps = 11/446 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V + S I + + G + A F M + N I++ +++SG A +
Sbjct: 188 SVSFNSMIDGYVKHGMVKSARELFDVMPM--EQKNLISWNSMISGYARSEEGLRVAWELF 245
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ + +++ +++D K G+M+ A +F+ M + +W M+DGY + G+
Sbjct: 246 EEM------PKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGE 299
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE--PDYVTIISVL 222
I+ A +FDEMP RD IS A++ G+V+ G+ EAL F +M +S E PD T++ L
Sbjct: 300 IDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDM-LSRKELFPDNATLLITL 358
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+A A +G G+ +H Y+ F + K+ LID+Y++CG I+ A VF+ + +++
Sbjct: 359 SAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSID 418
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
WN+II G A++G A E F M+K KPD ++F G L AC+HAGL+++GL F++M
Sbjct: 419 HWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELM 478
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+++++V P+++HYGC+VD+ RAG +E+A VE MP++PN+VV +LL+ACR + +
Sbjct: 479 RRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLSACRNHENFTI 538
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
E + K+L+ +D S+YVLL+N+YA G W+ +IR MK R ++K PG S IE+
Sbjct: 539 GEPVAKHLISVDSYNPSSYVLLSNIYAGFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEG 598
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLS 488
+HEF D+SH + IYSML+ LS
Sbjct: 599 NVHEFFVRDKSHPQVREIYSMLDSLS 624
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 182/344 (52%), Gaps = 19/344 (5%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
NP + W + I EA + F M +G + +F +L C+ + G
Sbjct: 86 NPFL-WNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRL--GLIKEGM 142
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
IHGL+ ++ + ++V + L+ +Y + G + +A +FD M + S ++N+MIDGY++
Sbjct: 143 QIHGLLGRMEIG-SDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKH 201
Query: 163 GDIESAVRMFDEMPV--RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G ++SA +FD MP+ ++ ISW ++++G+ + EE L E+ + D ++ S
Sbjct: 202 GMVKSARELFDVMPMEQKNLISWNSMISGYARS---EEGLRVAWELFEEMPKRDLISWNS 258
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+++ C G + ++ Q K +V ++D Y++ G I+ AR +F M +R
Sbjct: 259 MIDGCVKCGKMENA----HHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERD 314
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSM--QKEGFKPDGVSFTGALTACSHAGLIEDGLR- 337
++S N+++ G+ NG + EAL +F+ M +KE F PD + L+A + G ++G+
Sbjct: 315 VISCNAMMAGYVQNGHLMEALNFFHDMLSRKELF-PDNATLLITLSAIAQLGHFDEGVAL 373
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ I + +S ++ ++D+Y++ G +++AL+V E++ K
Sbjct: 374 HCYIEDNGFSLSEKLG--VALIDMYAKCGSIDNALSVFEDIDDK 415
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 120/234 (51%), Gaps = 11/234 (4%)
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
W A++ F EA F M +GV D + VL AC+ +G + G+ IH +
Sbjct: 90 WNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLG 149
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
+ + +V + N L+ LY RCGC+ ARQ+F RM KR VS+NS+I G+ +G V A E
Sbjct: 150 RMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARE 209
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE--HYGCIVD 360
F+ M E + + +S+ ++ + + E+GLR + +++ P+ + + ++D
Sbjct: 210 LFDVMPME--QKNLISWNSMISGYARS---EEGLR---VAWELFEEMPKRDLISWNSMID 261
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
+ G++E+A ++ MP K + V +++ G+I +A L + + D
Sbjct: 262 GCVKCGKMENAHHLFNQMP-KRDVVSWANMVDGYAKLGEIDIARGLFDEMPERD 314
>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
Length = 581
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 252/441 (57%), Gaps = 35/441 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV W + IS + R G +A F +M + +T + L A + +G +
Sbjct: 161 TVSWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGK--VKVGRLC 218
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H LV G N M G++L+ MYAK G
Sbjct: 219 HSLVVVNGAGINCYM-GSSLISMYAKCGL------------------------------- 246
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A ++F M R+ + WT++++G+ + G F+EA+ FR+MQI+G++ D TI +V+++
Sbjct: 247 VEDARKVFHGMHERNVVCWTSMISGYTQLGKFKEAVNLFRDMQITGMKVDDGTIATVVSS 306
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA +G L +G ++H Y + V N+LID+YS+CG I A ++F + KR + SW
Sbjct: 307 CAQMGALDLGRYVHAYCDVHGLGKELSVKNSLIDMYSKCGDINKAHEIFCGLTKRDVFSW 366
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
++I+GF VNG EAL+ F M+ EG P+ V+F G LT+CSH GL+E G YF M
Sbjct: 367 TAMIMGFTVNGLCSEALDLFAQMEGEGKVMPNEVTFLGVLTSCSHGGLVEQGFHYFQRMS 426
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+Y+++PRIEHYGC+VDL RA L +A ++NMP+ P+ VV SLL ACR G++ LA
Sbjct: 427 MVYKLAPRIEHYGCMVDLLGRAKLLTEAEQFIKNMPIAPDVVVWRSLLFACRACGEVGLA 486
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E + + +++L+P + +VLL+N+YA +W ++R +M + K+PG S IE+
Sbjct: 487 EFVAERILELEPKKCAGHVLLSNVYATTSRWVDVNELRTSMDNSRMSKQPGCSFIEVDGC 546
Query: 464 IHEFMAGDRSHIESEHIYSML 484
+HEF AGD SH+E+E IY++L
Sbjct: 547 VHEFFAGDESHLETEAIYNIL 567
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 118/228 (51%), Gaps = 3/228 (1%)
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEMP--VRDAISWTALLNGFVKRGYFEEALECF 203
V +F N++I+ Y +A ++ D P D +SW +++G+++ G +AL+ F
Sbjct: 125 VSDTFVLNSLINMYSSCSYPATARQVLDSAPQGACDTVSWNTIISGYLRGGMPNKALQAF 184
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
+M V D VT+++ L A A G + +G H V+ N + ++LI +Y++C
Sbjct: 185 GQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVVVNGAGINCYMGSSLISMYAKC 244
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
G +E AR+VF MH+R +V W S+I G+ G EA+ F MQ G K D + +
Sbjct: 245 GLVEDARKVFHGMHERNVVCWTSMISGYTQLGKFKEAVNLFRDMQITGMKVDDGTIATVV 304
Query: 324 TACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
++C+ G ++ G RY ++ + + ++D+YS+ G + A
Sbjct: 305 SSCAQMGALDLG-RYVHAYCDVHGLGKELSVKNSLIDMYSKCGDINKA 351
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
+A + + ++ +G +H +K + V N+LI++YS C ARQV +
Sbjct: 100 FSATSRLPSVSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSYPATARQVLDSAPQGAC 159
Query: 282 --VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
VSWN+II G+ G +AL+ F M KE D V+ AL A + AG ++ G R
Sbjct: 160 DTVSWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVG-RLC 218
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+ + ++ +Y++ G +EDA V M
Sbjct: 219 HSLVVVNGAGINCYMGSSLISMYAKCGLVEDARKVFHGM 257
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/462 (33%), Positives = 270/462 (58%), Gaps = 15/462 (3%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W ++ RSG I +A F RM N + + T+++G A G++
Sbjct: 163 WNILLAALVRSGNIDKARKLFDRMP----ERNVMAWTTMVAGIARS-------GSVNEAR 211
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
G+ NV+ A++ YA+ +D A +F M + +WN MI G+++ ++E
Sbjct: 212 ALFDGMPERNVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLER 271
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +FD+MP R+ ++WT ++NG+++ E AL+ F M I G+ P+ VT + ++AC+N
Sbjct: 272 AQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSN 331
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ L G +H+ + K F+ + + +TL++LY++CG I AR+VF ++ ++SWN +
Sbjct: 332 LAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGM 391
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I +A +G EA+ + MQ+ G+KP+ V++ G L+ACSH+GL+++GLR F+ M K
Sbjct: 392 IAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRS 451
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
++ R EHY C++DL SRAGRL DA ++ + ++P+ V +LL C + G+ + +
Sbjct: 452 IAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAA 511
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
+ L++ +P Y LL N+YA+ GKW A KIR M RG++K+PG S IE+ + +H F
Sbjct: 512 RNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVANKVHVF 571
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVP----ETVAGEL 505
++ D+SH ES+ I S+L+ + +++ VP + + GEL
Sbjct: 572 VSRDKSHSESDLINSLLQDIHDIMRMADTVPRDHTQLIDGEL 613
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 217/475 (45%), Gaps = 71/475 (14%)
Query: 17 HQQNPNQNLTTTPQISIQTNNSKSTVNPT-----VQWTSSISRHCRSGRIAEAALEFTRM 71
H Q+PN+ + + ++++ + T V WT+ ++ + G + +A F R
Sbjct: 34 HVQDPNRRVAELAAAG-RVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDR- 91
Query: 72 TLHGTNPNHITFITLLSGCADF----PSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
N +T+ LLSG A ++ LF G M NV+ +L+
Sbjct: 92 --PDARRNVVTWTALLSGYARAGRVDEAEALF-GRM----------PERNVVSWNTMLEA 138
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y GR+ A +F+ M V+ + +WN ++ +R G+I+ A ++FD MP R+ ++WT ++
Sbjct: 139 YTSSGRVGDACTLFNGMPVRDAGSWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMV 198
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
G + G EA F M E + V+ ++++ A + H +K +
Sbjct: 199 AGIARSGSVNEARALFDGMP----ERNVVSWNAMISGYARNHMIDEA---HDLFMKMPTR 251
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
D + N +I + + +E A+++F +M +R +V+W +++ G+ + AL+ FN M
Sbjct: 252 D-IASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGM 310
Query: 308 QKEGFKPDGVSFTGALTACSH-AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
+G +P+ V+F GA+ ACS+ AGL E + I K ++ IE +++LY++ G
Sbjct: 311 LIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIE--STLMNLYAKCG 368
Query: 367 RL-------------------------------EDALNVVENMP---MKPNEVVLGSLLA 392
+ +A+++ E M KPN+V LL+
Sbjct: 369 EIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLS 428
Query: 393 ACRTKGDIILAERLMKYLV-DLDPGV-DSNYVLLANMYAAVGKWDGAGKIRRTMK 445
AC G + R+ +Y+V D V D +Y L ++ + G+ A ++ +K
Sbjct: 429 ACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLK 483
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
D ++V+ N + + G + AR++F R R +VSW +++ +A G + +A F
Sbjct: 30 DVSNHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALF 89
Query: 305 NSMQKEGFKPDG----VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
+ +PD V++T L+ + AG +++ F M + VS + +++
Sbjct: 90 D-------RPDARRNVVTWTALLSGYARAGRVDEAEALFGRMPERNVVS-----WNTMLE 137
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
Y+ +GR+ DA + MP++ + LLAA G+I A +L
Sbjct: 138 AYTSSGRVGDACTLFNGMPVR-DAGSWNILLAALVRSGNIDKARKL 182
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 252/465 (54%), Gaps = 34/465 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I + ++ EA L F +M G P ++ + L CAD L G I
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD--LERGRFI 359
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H L +LGLDRN +V N++I Y + +
Sbjct: 360 HKLSVELGLDRNVSVV--------------------------------NSLISMYCKCKE 387
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+++A MF ++ R +SW A++ GF + G +AL F +M+ V+PD T +SV+ A
Sbjct: 388 VDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
A + WIH V++ NV V L+D+Y++CG I AR +F M +R + +W
Sbjct: 448 IAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTW 507
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G+ +GF ALE F MQK KP+GV+F ++ACSH+GL+E GL+ F +MK+
Sbjct: 508 NAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKE 567
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + ++HYG +VDL RAGRL +A + + MP+KP V G++L AC+ ++ AE
Sbjct: 568 NYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAE 627
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ + L +L+P +VLLAN+Y A W+ G++R +M +G++K PG S +EI + +
Sbjct: 628 KAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEV 687
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
H F +G +H +S+ IY+ LE L +K GYVP+T END
Sbjct: 688 HSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVEND 732
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 187/387 (48%), Gaps = 69/387 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTR-MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + ++ + ++G +A ALE + M P+ IT +++L + + + +G I
Sbjct: 202 VSWNTIVAGYSQNG-MARMALEMVKSMCEENLKPSFITIVSVLPAVSAL--RLISVGKEI 258
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + G D + V + TAL+DMYAK G
Sbjct: 259 HGYAMRSGFD-SLVNISTALVDMYAKC-------------------------------GS 286
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E+A ++FD M R+ +SW ++++ +V+ +EA+ F++M GV+P V+++ L+A
Sbjct: 287 LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHA 346
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L G +IH+ ++ NV V N+LI +Y +C ++ A +F ++ RTLVSW
Sbjct: 347 CADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSW 406
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS------HAGLIEDGLRY 338
N++I+GFA NG +AL YF+ M+ KPD ++ +TA + HA I +
Sbjct: 407 NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 339 FDIMKKIYRVSPRIEHYG------------------------CIVDLYSRAGRLEDALNV 374
+ K ++ + ++ Y ++D Y G + AL +
Sbjct: 467 SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALEL 526
Query: 375 VENM---PMKPNEVVLGSLLAACRTKG 398
E M +KPN V S+++AC G
Sbjct: 527 FEEMQKGTIKPNGVTFLSVISACSHSG 553
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 128/268 (47%), Gaps = 34/268 (12%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F RM P F LL C D L +G IHGL+ K G LD+
Sbjct: 123 FVRMRYDDVEPVVYNFTYLLKVCGDEAE--LRVGKEIHGLLVKSGFS----------LDL 170
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
+A G ++ Y + + A ++FD MP RD +SW ++
Sbjct: 171 FAMTGLENM----------------------YAKCRQVNEARKVFDRMPERDLVSWNTIV 208
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
G+ + G ALE + M ++P ++TI+SVL A + + + +G IH Y ++ F
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 268
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
V + L+D+Y++CG +E ARQ+F M +R +VSWNS+I + N EA+ F M
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDG 335
EG KP VS GAL AC+ G +E G
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERG 356
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 154/354 (43%), Gaps = 52/354 (14%)
Query: 139 VVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE 198
+VF + F ++ + R G ++ A R+F+ + + + + +L GF K ++
Sbjct: 59 LVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDK 118
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
AL+ F M+ VEP +L C + L +G IH ++K F ++ L +
Sbjct: 119 ALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
+Y++C + AR+VF RM +R LVSWN+I+ G++ NG ALE SM +E KP ++
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR------IEHYGCIVDLYSRAGRLEDAL 372
L A S LR + K+I+ + R + +VD+Y++ G LE A
Sbjct: 239 IVSVLPAVS-------ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291
Query: 373 NVVENM----------------------------------PMKPNEVVLGSLLAACRTKG 398
+ + M +KP +V + L AC G
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
Query: 399 DIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
D+ + K V+L G+D N + L +MY + D A + ++ R +
Sbjct: 352 DLERGRFIHKLSVEL--GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/457 (35%), Positives = 263/457 (57%), Gaps = 35/457 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W I+ + ++ EA F R+ G N ITF+ +L+ S L G +I
Sbjct: 273 VVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTS--LAKGKVI 330
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H LV + G DR+ V+V TAL+ +Y GR +
Sbjct: 331 HELVKEAGYDRD-VVVATALMSLY---GRCEAPG-------------------------- 360
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A ++F +M +D I+WT + + + G+ +EAL+ F+EMQ+ G P T+++VL+
Sbjct: 361 --QAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDT 418
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++ L G IH ++++ F+ + V LI++Y +CG + AR VF++M KR ++ W
Sbjct: 419 CAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVW 478
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
NS++ +A +G+ E L+ FN MQ +G K D VSF L+A SH+G + DG +YF M +
Sbjct: 479 NSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQ 538
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP-MKPNEVVLGSLLAACRTKGDIILA 403
+ ++P E YGC+VDL RAGR+++A+++V + P+ ++ +LL ACRT A
Sbjct: 539 DFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQA 598
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
+ + +++ DP YV+L+N+YAA G WDG ++R+ M+ RG++K+PG SSIEI +
Sbjct: 599 KAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNR 658
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+HEF+ GDRSH IY+ L++L+ +++ GY+P+T
Sbjct: 659 VHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDT 695
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 167/355 (47%), Gaps = 38/355 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ I+ + + A A + RM L G PN IT T+ + D L G I
Sbjct: 172 VVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGD--PHYLSEGKFI 229
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ LV ++ ++V V + ++M+ G + GD
Sbjct: 230 YSLVSSRVME-SDVRVMNSAMNMFGNAGLL----------------------------GD 260
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A R+F++M RD ++W ++ +V+ F EA+ F +Q G++ + +T + +LN
Sbjct: 261 ---ARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNV 317
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
++ +L G IH V + + +V V L+ LY RC A ++F M + +++W
Sbjct: 318 YTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITW 377
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMK 343
+ V +A NGF EAL+ F MQ EG +P + L C+H ++ G + + I++
Sbjct: 378 TVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIE 437
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
+R+ +E ++++Y + G++ +A +V E M K + +V S+L A G
Sbjct: 438 NGFRMEMVVE--TALINMYGKCGKMAEARSVFEKMA-KRDILVWNSMLGAYAQHG 489
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 193/438 (44%), Gaps = 72/438 (16%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WT I +C+ G A F +M P +T++ +L+ CA ++ L G IHG
Sbjct: 74 WTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACA--STESLKDGMEIHGQ 131
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ + G + +V VGTAL++MY K G + RG +S
Sbjct: 132 ILQQGFE-GDVFVGTALINMYNKCGSV---------------------------RGAWDS 163
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
F + RD +SWTA++ V+ F A +R MQ+ GV P+ +T+ +V NA +
Sbjct: 164 ----FKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGD 219
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
L G +I+ V + + +V+V N+ ++++ G + AR++F+ M R +V+WN +
Sbjct: 220 PHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIV 279
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT------GALTACSHAGLIEDGLRYFDI 341
I + N GEA+ F +Q++G K + ++F +LT+ + +I + ++
Sbjct: 280 ITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGY 339
Query: 342 MKKIYRVSPRIEHYG----------CIVDL--------------YSRAGRLEDALNVVEN 377
+ + + + YG VD+ Y++ G ++AL + +
Sbjct: 340 DRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQE 399
Query: 378 MPM---KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAV 431
M + +P L ++L C + ++ +++ + G V+ L NMY
Sbjct: 400 MQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHII--ENGFRMEMVVETALINMYGKC 457
Query: 432 GKWDGAGKIRRTMKGRGI 449
GK A + M R I
Sbjct: 458 GKMAEARSVFEKMAKRDI 475
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 37/303 (12%)
Query: 77 NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
P+ F+ LL C+ ++ + G +H VC G ++NN++ G L+ MYA+ G +
Sbjct: 2 KPDTAFFVALLQRCS--SAKNVDHGRRVHWHVCDRGFEQNNLVCGH-LIQMYAQCGSVPE 58
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A VF+ + K F W MI Y ++GD + A+ MF +M D
Sbjct: 59 AQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEED----------------- 101
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
V P VT +++LNACA+ +L G+ IH +L+Q F+ +V V L
Sbjct: 102 --------------VMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTAL 147
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
I++Y++CG + A F+R+ R +VSW ++I + A + MQ +G P+
Sbjct: 148 INMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNK 207
Query: 317 VSFTGALTACSHAGLIEDG-LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
++ A + +G Y + ++ R+ + ++++ AG L DA +
Sbjct: 208 ITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSA--MNMFGNAGLLGDARRLF 265
Query: 376 ENM 378
E+M
Sbjct: 266 EDM 268
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 112/222 (50%), Gaps = 6/222 (2%)
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
+PD +++L C++ + G +H +V + F+ N VC LI +Y++CG + A+Q
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
VF+ + ++ + +W +I + G AL F MQ+E P V++ L AC+
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 332 IEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
++DG+ + I+++ + + ++++Y++ G + A + + + + + V ++
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVG--TALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAM 178
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
+AAC LA L + + LD GV N + L ++ A G
Sbjct: 179 IAACVQHDQFALARWLYRRM-QLD-GVVPNKITLYTVFNAYG 218
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/431 (37%), Positives = 246/431 (57%), Gaps = 38/431 (8%)
Query: 70 RMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA 129
+M + G +P+H TF +L CA + G +H L+ KLG D ++V V L+ Y
Sbjct: 77 KMAMAGVSPDHFTFPFVLKACARLQT-----GLDLHSLLFKLGFD-SDVYVQNGLIHFYG 130
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
G +D A +++F+EMP RD +SW++++
Sbjct: 131 CCGFLDFA-------------------------------LKVFEEMPERDLVSWSSMIAC 159
Query: 190 FVKRGYFEEALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD 248
F K G+ EAL F+ MQ+ G V+PD V ++SV++A + +G L +G WI ++ + +
Sbjct: 160 FAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEF 219
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
V + L+D++SRCGCIE + +VF M +R +++W ++I G AV+G EAL F M+
Sbjct: 220 TVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMR 279
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
GF+PD V+FTG L ACSH GL+ +G F+ ++ Y + P EHYGC+VDL RAG L
Sbjct: 280 NHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLL 339
Query: 369 EDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMY 428
+A V+ MP++PN ++ +LL AC I LAE++ + + +LD D +YVLL+N+Y
Sbjct: 340 NEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVY 399
Query: 429 AAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLS 488
VG+W +R +M+ + I KKPG S I + IHEF+AGD +H + E I L +
Sbjct: 400 GGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMI 459
Query: 489 FDLKLCGYVPE 499
LK+ GY P+
Sbjct: 460 DSLKVVGYTPD 470
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 35/190 (18%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMI 104
V W+S I+ ++G EA F RM L GT P+ + ++++S + L LG I
Sbjct: 151 VSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGD--LELGKWI 208
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
G + + GL+ V +GTAL+DM+++ G ++ + VFD M ++ TW A+I+G G
Sbjct: 209 RGFISRNGLEFT-VSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGR 267
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A+RM F EM+ G +PD+VT VL A
Sbjct: 268 SAEALRM-------------------------------FYEMRNHGFQPDHVTFTGVLVA 296
Query: 225 CANVGTLGIG 234
C++ G + G
Sbjct: 297 CSHGGLVSEG 306
>gi|297729191|ref|NP_001176959.1| Os12g0490100 [Oryza sativa Japonica Group]
gi|255670316|dbj|BAH95687.1| Os12g0490100 [Oryza sativa Japonica Group]
Length = 451
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/452 (35%), Positives = 247/452 (54%), Gaps = 33/452 (7%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
M G PN T +++ C+ + + G +H + K GL ++V VG ALLD+Y
Sbjct: 1 MLWSGPRPNAFTVTSVIKCCSKV--RAVHEGLQVHAFLAKAGLGCSSVHVGAALLDLYGN 58
Query: 131 FGRMDLATVVFDAMRVKS-------------------------------SFTWNAMIDGY 159
G + A VFD M VK+ +WN ++ GY
Sbjct: 59 IGLVGDARRVFDEMPVKNVVVGNTMVACNVRAGDMGAAREVFDGMAERDPISWNTLMSGY 118
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ GD + +FDEM VR+ SW ++ + G + ++ F M+ +G EPD T+
Sbjct: 119 LHLGDTATVRELFDEMTVRNVNSWNTMIAACSEEGSLADTVKVFNRMRATGFEPDAATMA 178
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+++ACA +G+L I +H + K + N V N+LID+Y++CGCI A+ +F + +
Sbjct: 179 VLMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLIDMYAKCGCISQAQFLFTETYPK 238
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
VS+N +I+ FA +G +AL+ FN+M G +PD V+F G L+AC+HAGL+E G YF
Sbjct: 239 DTVSYNVMIIAFAQHGHARDALDLFNAMVDSGLQPDAVTFLGVLSACAHAGLVEYGKNYF 298
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
++MK Y V +HY C+VDLY RAG +E+A V+ MP+KP+ V G+LL ACR
Sbjct: 299 ELMKTTYAVQQSPDHYACVVDLYGRAGLIEEAHCFVKTMPVKPHAGVWGALLNACRKHCH 358
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
+ + E K L+ ++P NYVLL N A +WD ++ +M+ + I K G S +E
Sbjct: 359 VDVGEIAAKELIRIEPKNPGNYVLLRNTLARGQQWDAVEDVQLSMRRKVIDKTAGCSWVE 418
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDL 491
+ S +HEF+AGD H + + IY++LE L +L
Sbjct: 419 VDSVVHEFLAGDFYHPKFDEIYTILEHLYMEL 450
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 101/241 (41%), Gaps = 43/241 (17%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
TV W + I+ G +A+ F RM G P+ T L+S CA S L +
Sbjct: 135 TVRNVNSWNTMIAACSEEGSLADTVKVFNRMRATGFEPDAATMAVLMSACAQLGS--LTI 192
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
+HGL+ K ++ N V +L+DMYAK G + A +F K + ++N MI +
Sbjct: 193 AGQVHGLLQKSCVEM-NCHVQNSLIDMYAKCGCISQAQFLFTETYPKDTVSYNVMIIAF- 250
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G+ +AL+ F M SG++PD VT +
Sbjct: 251 ------------------------------AQHGHARDALDLFNAMVDSGLQPDAVTFLG 280
Query: 221 VLNACANVGTLGIG-----LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
VL+ACA+ G + G L Y ++Q V +DLY R G IE A +
Sbjct: 281 VLSACAHAGLVEYGKNYFELMKTTYAVQQSPDHYACV----VDLYGRAGLIEEAHCFVKT 336
Query: 276 M 276
M
Sbjct: 337 M 337
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/464 (37%), Positives = 262/464 (56%), Gaps = 52/464 (11%)
Query: 43 NP-TVQWTSSISRHCRS-GRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLF 99
NP + W + I RS R A + RM G+ + TF +L CA + L
Sbjct: 88 NPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFA--LS 145
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
G IH + KLG D ++V + +L+ YA R+D A VFD
Sbjct: 146 EGEQIHAQILKLGFD-SDVYINNSLVHFYATCDRLDFAKGVFD----------------- 187
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
M R +SW +++ FV+ G F+ AL F EMQ EPD TI
Sbjct: 188 --------------RMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQ-KFFEPDGYTIQ 232
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
S+ NACA +G+L +G+ ++V + +L+D+Y +CG +E A Q+F RM KR
Sbjct: 233 SIANACAGMGSLSLGI-----------VNDVLLNTSLVDMYCKCGSLELALQLFHRMPKR 281
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ SWNS+I+GF+ +G V ALEYF M + E P+ ++F G L+AC+H GL+ +G RY
Sbjct: 282 DVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRRY 341
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLL-AACRTK 397
FD+M Y++ P +EHYGC+VDL +RAG +++AL+VV NMPM+P+ V+ SLL A C+
Sbjct: 342 FDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQN 401
Query: 398 GDIILAERLMKYLVDLDPGVDSN-YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
+ L+E + + +++ + GV S YVLL+ +YA+ +W+ G +R+ M +G+ K+PG S
Sbjct: 402 AGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCS 461
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
SIEI HEF AGD SH ++E IYS L+++ ++ GY P++
Sbjct: 462 SIEIDGVAHEFFAGDTSHPQTEEIYSALDVIEERVERVGYSPDS 505
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 121/255 (47%), Gaps = 24/255 (9%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKR-GYFEEALECFREMQISG-VEPDYVTIISV 221
D+ A R+F ++ ++ W AL+ + + A+ + M G V D T V
Sbjct: 75 DLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFV 134
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L ACA + L G IH +LK F +V + N+L+ Y+ C ++FA+ VF RM +R+L
Sbjct: 135 LKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSL 194
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VSWN +I F G AL F MQK F+PDG + AC+ G + G+ D+
Sbjct: 195 VSWNVVIDAFVRFGEFDAALNLFGEMQK-FFEPDGYTIQSIANACAGMGSLSLGI-VNDV 252
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVL-----GSLLA 392
+ +VD+Y + G LE AL + MP + N ++L G + A
Sbjct: 253 LLNT-----------SLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAA 301
Query: 393 ACRTKGDIILAERLM 407
A G ++ E+LM
Sbjct: 302 ALEYFGCMVRTEKLM 316
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 261/447 (58%), Gaps = 4/447 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W++ I+R+ +SG EA F++M G PN F LS A + L G IH
Sbjct: 282 ISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASL--RALSAGINIH 339
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V K+G+D++ V +G++L+D+Y K G+ D +VFD + K+ WN+M+ GY G +
Sbjct: 340 GHVTKIGIDKD-VFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRL 398
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E +F+ +P ++ +SW ++ G+++ E+ LE F + +SG P+ T SVL AC
Sbjct: 399 EETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCAC 458
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ +L G+ +H ++K + ++ V L D+Y++CG I ++QVF+RM ++ +SW
Sbjct: 459 ASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWT 518
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+I G A +GF E+L F M++ P+ + L ACSH GL++ GL YF+ M+K
Sbjct: 519 VMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEK 578
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y + P+ +HY C+VDL SR+GRL +A + +P +P +LL+ C+ D +AE
Sbjct: 579 VYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAE 638
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
R K L L + YVLL+N+YA+ G+W IR+ M+ +G++K G S +E+ + +
Sbjct: 639 RTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQV 698
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDL 491
H F + D SH +S IY L+LL ++
Sbjct: 699 HSFYSEDGSHSQSNEIYGTLQLLRSEM 725
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 194/379 (51%), Gaps = 43/379 (11%)
Query: 43 NP---TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
NP V WT++IS R+G EA F R+ G PN +TF +++ C +
Sbjct: 144 NPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGD--FG 201
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
LG I GLV K G + + + V +L+ + + G +DLA VFD M + +W A++D Y
Sbjct: 202 LGMSILGLVVKAGFE-HYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAY 260
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ GD+ A R+FDEMP R+ ISW+A++ + + GY EEAL+ F +M G +P+
Sbjct: 261 VETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFA 320
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L+A A++ L G+ IH +V K +V + ++LIDLY +CG + R VF + ++
Sbjct: 321 CTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEK 380
Query: 280 TLVSWNSIIVGFAVNGFVG-------------------------------EALEYFNSMQ 308
+V WNS++ G+++NG + + LE FN++
Sbjct: 381 NVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLL 440
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAG 366
G P+ +F+ L AC+ ++ G+ ++ KI ++ + + + + D+Y++ G
Sbjct: 441 VSGQTPNKSTFSSVLCACASIASLDKGM---NVHGKIIKLGIQYDIFVGTALTDMYAKCG 497
Query: 367 RLEDALNVVENMPMKPNEV 385
+ + V E MP K NE+
Sbjct: 498 DIGSSKQVFERMPEK-NEI 515
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 163/317 (51%), Gaps = 33/317 (10%)
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
D ++++V ++ Y ++G + A ++FD M ++ +W+A+I G M+ G +E ++ F
Sbjct: 82 FDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYF 141
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
+ P ++ +SWTA ++GFV+ G EAL+ F + SGV P+ VT SV+ AC +G G
Sbjct: 142 ERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFG 201
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI----- 287
+G+ I V+K F+ + V N+LI L R G I+ AR+VF RM KR +VSW +I
Sbjct: 202 LGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYV 261
Query: 288 --------------------------IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
I ++ +G+ EAL+ F+ M +EGFKP+ F
Sbjct: 262 ETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFAC 321
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+A + + G+ + KI + + ++DLY + G+ +D +V ++ ++
Sbjct: 322 TLSALASLRALSAGINIHGHVTKI-GIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDLILE 379
Query: 382 PNEVVLGSLLAACRTKG 398
N V S++ G
Sbjct: 380 KNVVCWNSMVGGYSING 396
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF--------- 291
++K+ ++ V N +I Y + G + AR +F M +R VSW+++I G
Sbjct: 78 IVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEES 137
Query: 292 -----------------AVNGFVG-----EALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
A++GFV EAL+ F + + G +P+ V+FT + AC
Sbjct: 138 MWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGEL 197
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHY----GCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
G G+ ++ V EHY ++ L R G ++ A V + M K + V
Sbjct: 198 GDFGLGMSILGLV-----VKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRME-KRDVV 251
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
++L A GD+ A R+ + + + + ++ + Y+ G + A K+ M
Sbjct: 252 SWTAILDAYVETGDLREARRIFDEMPERN---EISWSAMIARYSQSGYAEEALKLFSKMV 308
Query: 446 GRGIQKKPGLS 456
G KP +S
Sbjct: 309 QEGF--KPNIS 317
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/453 (35%), Positives = 250/453 (55%), Gaps = 34/453 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W + IS H ++ EAA F M G N T T+L A Q ++ IH
Sbjct: 279 IAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAAL--QANYMCRQIH 336
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L K G + +N +V N++ID Y + G +
Sbjct: 337 ALSLKSGFEFDNYVV--------------------------------NSLIDTYGKCGHV 364
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A R+F+E P+ D + +T+L+ + + G EEAL + EMQ G++PD S+LNAC
Sbjct: 365 EDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNAC 424
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ G +H ++LK F ++ N+L+++Y++CG IE A F R+ R +VSW+
Sbjct: 425 ASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWS 484
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G A +G+ EAL+ F M K G P+ ++ L AC+HAGL+ + YF+ MK +
Sbjct: 485 AMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKIL 544
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ + P EHY C++DL RAG+LE A+ +V MP + N +V G+LL A R +I L E+
Sbjct: 545 FGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQ 604
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ L+ L+P +VLLAN+YA+VG WD ++RR MK ++K+PG+S +E+ ++
Sbjct: 605 AAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVY 664
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
F+ GDRSH S IY+ L+ LS LK GYVP
Sbjct: 665 TFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVP 697
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 178/392 (45%), Gaps = 50/392 (12%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + S + S EA F M L G PN + ++++ C G I
Sbjct: 76 VVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDS--VQGRKI 133
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + KLG D + +F+ NA++D Y + G
Sbjct: 134 HGYLIKLGYDSD--------------------------------AFSANALVDMYAKVGI 161
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A +FDE+ D +SW A++ G V Y ALE REM SG+ P+ T+ S L A
Sbjct: 162 LEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKA 221
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA + +G +H ++K D + + LID+YS+C ++ AR VF+ M +R +++W
Sbjct: 222 CAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAW 281
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G + N EA F M EG + + + L + + L+ + ++
Sbjct: 282 NAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIA-------ALQANYMCRQ 334
Query: 345 IYRVSPR----IEHY--GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
I+ +S + ++Y ++D Y + G +EDA V E P+ + V+ SL+ A G
Sbjct: 335 IHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPI-VDLVLFTSLVTAYAQDG 393
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
A RL YL D G+ + + +++ A
Sbjct: 394 QGEEALRL--YLEMQDRGIKPDSFVCSSLLNA 423
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 146/309 (47%), Gaps = 35/309 (11%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 130
M L G N F ++L C ++ L LG +HG+V G D + V +L+ +YAK
Sbjct: 1 MHLLGIKCNEFAFPSVLKACT--VTKDLVLGKQVHGIVVVTGFDSDE-FVANSLVILYAK 57
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
G G+ GD S +FD +P R +SW AL + +
Sbjct: 58 CG-------------------------GF---GDARS---LFDAIPDRSVVSWNALFSCY 86
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
V EA+ F +M +SG+ P+ ++ S++N C + G IH Y++K + +
Sbjct: 87 VHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDA 146
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
N L+D+Y++ G +E A VF + K +VSWN+II G ++ + ALE M K
Sbjct: 147 FSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKS 206
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
G P+ + + AL AC+ L E G + + K+ S G ++D+YS+ ++D
Sbjct: 207 GMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVG-LIDMYSKCNSMDD 265
Query: 371 ALNVVENMP 379
A V + MP
Sbjct: 266 ARLVFKLMP 274
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 181/438 (41%), Gaps = 77/438 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTR-MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I+ C ALE R M G PN T + L CA + LG +
Sbjct: 178 VSWNAIIAG-CVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALR--ELGRQL 234
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K+ + ++ + G L+DMY+K MD A +V
Sbjct: 235 HSSLIKMDMGSDSFL-GVGLIDMYSKCNSMDDARLV------------------------ 269
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
F MP RD I+W A+++G + EEA F M G+ + T+ +VL +
Sbjct: 270 -------FKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKS 322
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
A + + IH LK F+ + V N+LID Y +CG +E A +VF+ LV +
Sbjct: 323 IAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLF 382
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMK 343
S++ +A +G EAL + MQ G KPD + L AC+ E G + + I+K
Sbjct: 383 TSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILK 442
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK---------------------- 381
+ I +V++Y++ G +EDA +P++
Sbjct: 443 --FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEAL 500
Query: 382 ------------PNEVVLGSLLAACRTKGDIILAERL---MKYLVDLDPGVDSNYVLLAN 426
PN + L S+L AC G + A+ MK L ++P + +Y + +
Sbjct: 501 QLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEP-MQEHYACMID 559
Query: 427 MYAAVGKWDGAGKIRRTM 444
+ GK + A ++ M
Sbjct: 560 LLGRAGKLEAAMELVNKM 577
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
M + G++ + SVL AC L +G +H V+ F + V N+L+ LY++CG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
AR +F + R++VSWN++ + + GEA+ F+ M G +P+ S + +
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG--CIVDLYSRAGRLEDALNVVENMP---- 379
C+ +ED ++ I + ++ + + +VD+Y++ G LEDA +V + +
Sbjct: 121 CTG---LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDI 177
Query: 380 ------------------------------MKPNEVVLGSLLAACRTKGDIILAERLMKY 409
M PN L S L AC L +L
Sbjct: 178 VSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSS 237
Query: 410 LVDLDPGVDSNY-VLLANMYAAVGKWDGAGKIRRTMKGR 447
L+ +D G DS V L +MY+ D A + + M R
Sbjct: 238 LIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPER 276
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/419 (37%), Positives = 239/419 (57%), Gaps = 11/419 (2%)
Query: 90 CADFPSQCLFLGAMIHGLVCKLGL----------DRNNVMVGTALLDMYAKFGRMDLATV 139
C F + +MI+G + L +V++ ++ Y + G M A
Sbjct: 37 CEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARK 96
Query: 140 VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
+F M + WN ++ GY G++E+ +F+EMP R+ SW AL+ G+ G F E
Sbjct: 97 LFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEV 156
Query: 200 LECFREM-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
L F+ M S V P+ T+++VL+ACA +G L +G W+H Y K NV V N L+D
Sbjct: 157 LGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMD 216
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
+Y++CG IE A VF+ M + L+SWN++I G A++ +AL F M+ G KPDG++
Sbjct: 217 MYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGIT 276
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
F G L AC+H GL+EDG YF M Y + P+IEHYGC+VD+ +RAGRLE A+ V M
Sbjct: 277 FIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKM 336
Query: 379 PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAG 438
P++ + V+ LL ACR ++ LAE ++ L++L+P +NYV+L+N+Y G+W+
Sbjct: 337 PVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVA 396
Query: 439 KIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV 497
+++ M+ G +K PG S IE+ + EF + D H + E IY +L L L+ GY+
Sbjct: 397 RLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGYI 455
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 41/256 (16%)
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTAL 186
M+ + + + +F M ++ W +MI+GY+ D+ SA R+FD P RD + W +
Sbjct: 22 MFRGYAQSESYREIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIM 81
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
++G+++ G EA + F EM
Sbjct: 82 VSGYIEGGDMVEARKLFHEMP--------------------------------------- 102
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
+V NT++ Y+ G +E +F+ M +R + SWN++I G+A NG E L F
Sbjct: 103 NRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKR 162
Query: 307 MQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
M E P+ + L+AC+ G ++ G ++ + + + + ++D+Y++
Sbjct: 163 MLSESDVPPNDATLVTVLSACARLGALDLG-KWVHVYAESSGLKGNVYVGNALMDMYAKC 221
Query: 366 GRLEDALNVVENMPMK 381
G +E+A++V M K
Sbjct: 222 GIIENAISVFRGMDTK 237
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 133/330 (40%), Gaps = 82/330 (24%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
W + I + +G E F RM + PN T +T+LS CA + L LG +H
Sbjct: 140 WNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGA--LDLGKWVHV 197
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
GL + NV VG AL+DMYAK G ++ A VF M K +WN +I G
Sbjct: 198 YAESSGL-KGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGL------- 249
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
M R A +AL F +M+ +G +PD +T I +L AC
Sbjct: 250 -------AMHSRGA-----------------DALNLFFQMKNAGQKPDGITFIGILCACT 285
Query: 227 NVGTLGIGLWIHRYVLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
++G + G + + D+ ++ ++D+ +R G +E
Sbjct: 286 HMGLVEDGF-AYFQSMADDYLIMPQIEHYGCMVDMLARAGRLE----------------- 327
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC---SHAGLIEDGLRYFDI 341
+A+ + M E DGV + G L AC + L E L
Sbjct: 328 --------------QAMAFVRKMPVEA---DGVIWAGLLGACRIYKNVELAELAL----- 365
Query: 342 MKKIYRVSPR-IEHYGCIVDLYSRAGRLED 370
+++ + P+ +Y + ++Y AGR ED
Sbjct: 366 -QRLIELEPKNPANYVMLSNIYGDAGRWED 394
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 261/447 (58%), Gaps = 4/447 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W++ I+R+ +SG EA F++M G PN F LS A + L G IH
Sbjct: 282 ISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASL--RALSAGINIH 339
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V K+G+D++ V +G++L+D+Y K G+ D +VFD + K+ WN+M+ GY G +
Sbjct: 340 GHVTKIGIDKD-VFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRL 398
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E +F+ +P ++ SW +J G+++ E+ LE F + +SG P+ T SVL AC
Sbjct: 399 EEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCAC 458
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ +L G+ +H ++K + ++ V L D+Y++CG I ++QVF+RM ++ +SW
Sbjct: 459 ASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWT 518
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+I G A +GF E+L F M++ P+ + L ACSH GL++ GL YF+ M+K
Sbjct: 519 VMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEK 578
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y + P+ +HY C+VDL SR+GRL +A + +P +P +LL+ C+ D +AE
Sbjct: 579 VYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAE 638
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
R K L L + YVLL+N+YA+ G+W IR+ M+ +G++K G S +E+ + +
Sbjct: 639 RTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQV 698
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDL 491
H F + D SH +S+ IY L+LL ++
Sbjct: 699 HSFYSEDGSHSQSDEIYGTLQLLRSEM 725
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 194/379 (51%), Gaps = 43/379 (11%)
Query: 43 NP---TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
NP V WT++IS R+G EA F R+ G PN +TF +++ C +
Sbjct: 144 NPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGD--FG 201
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
LG I GLV K G + + + V +L+ + + G +DLA VFD M + +W A++D Y
Sbjct: 202 LGMSILGLVVKAGFE-HYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAY 260
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ GD+ A R+FDEMP R+ ISW+A++ + + GY EEAL+ F +M G +P+
Sbjct: 261 VETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFA 320
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L+A A++ L G+ IH +V K +V + ++LIDLY +CG + R VF + ++
Sbjct: 321 CTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEK 380
Query: 280 TLVSWNSIIVGFAVNG-----------------------FVG--------EALEYFNSMQ 308
+V WNS++ G+++NG G + LE FN++
Sbjct: 381 NVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLL 440
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAG 366
G P+ +F+ L AC+ ++ G+ ++ KI ++ + + + + D+Y++ G
Sbjct: 441 VSGQTPNKSTFSSVLCACASIASLDKGM---NVHGKIIKLGIQYDIFVGTALTDMYAKCG 497
Query: 367 RLEDALNVVENMPMKPNEV 385
+ + V E MP K NE+
Sbjct: 498 DIGSSKQVFERMPEK-NEI 515
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 163/317 (51%), Gaps = 33/317 (10%)
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
D ++++V ++ Y ++G + A ++FD M ++ +W+A+I G M+ G +E ++ F
Sbjct: 82 FDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYF 141
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
+ P ++ +SWTA ++GFV+ G EAL+ F + SGV P+ VT SV+ AC +G G
Sbjct: 142 ERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFG 201
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI----- 287
+G+ I V+K F+ + V N+LI L R G I+ AR+VF RM KR +VSW +I
Sbjct: 202 LGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYV 261
Query: 288 --------------------------IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
I ++ +G+ EAL+ F+ M +EGFKP+ F
Sbjct: 262 ETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFAC 321
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+A + + G+ + KI + + ++DLY + G+ +D +V ++ ++
Sbjct: 322 TLSALASLRALSAGINIHGHVTKI-GIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDLILE 379
Query: 382 PNEVVLGSLLAACRTKG 398
N V S++ G
Sbjct: 380 KNVVCWNSMVGGYSING 396
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF--------- 291
++K+ ++ V N +I Y + G + AR +F M +R VSW+++I G
Sbjct: 78 IVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEES 137
Query: 292 -----------------AVNGFVG-----EALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
A++GFV EAL+ F + + G +P+ V+FT + AC
Sbjct: 138 MWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGEL 197
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHY----GCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
G G+ ++ V EHY ++ L R G ++ A V + M K + V
Sbjct: 198 GDFGLGMSILGLV-----VKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRME-KRDVV 251
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
++L A GD+ A R+ + + + + ++ + Y+ G + A K+ M
Sbjct: 252 SWTAILDAYVETGDLREARRIFDEMPERN---EISWSAMIARYSQSGYAEEALKLFSKMV 308
Query: 446 GRGIQKKPGLS 456
G KP +S
Sbjct: 309 QEGF--KPNIS 317
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/416 (36%), Positives = 246/416 (59%), Gaps = 5/416 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + + R G + A +M G P+ +T +T ++ C+ ++ L LG IH
Sbjct: 116 VLWNMMVRCYIRCGWYSAAVALSEQMERSGVTPDRVTLVTAVTACSR--ARDLSLGRRIH 173
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + N+ V ALLDMY K ++ A +F+ M ++ +W ++ GY G +
Sbjct: 174 --VYMDNVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQL 231
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A +F++ +D I WTA++N V+ G FEEAL FR+MQ+ VEPD T++++L C
Sbjct: 232 DKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCC 291
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN+G L G WIH+Y ++ K + + LID+YS+CG IE + +VF RM R +W
Sbjct: 292 ANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWT 351
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+II G A NG G ALE F MQ+ KPDGV+F G L+AC H GL+++G + F M+++
Sbjct: 352 AIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREV 411
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL-GSLLAACRTKGDIILAE 404
Y++ PR+EHY C+V+L RAG L++A ++ ++P+ + + L G+LL AC+ G++ ++E
Sbjct: 412 YQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSE 471
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
RL K + + D + +L++N+YA +W+ ++R M ++K G S IE+
Sbjct: 472 RLTKRICEQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKNAGCSLIEV 527
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 135/276 (48%), Gaps = 46/276 (16%)
Query: 143 AMRVKSSFTWNA-----MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
A VK+ F W+A +++ Y G ++ A ++FDEMP R + W ++ +++ G++
Sbjct: 73 AAAVKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGWYS 132
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
A+ +M+ SGV PD VT+++ + AC+ L +G IH Y + F N+ V N L+
Sbjct: 133 AAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVY-MDNVFGFNLPVANALL 191
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
D+Y++ C+E A ++F++M R ++SW ++ G+ + G + +A FN +++ D +
Sbjct: 192 DMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEK----DLI 247
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR----------------------IEHY 355
+T + AC G E+ L F M ++ RV P I Y
Sbjct: 248 LWTAMINACVQHGCFEEALTLFRDM-QMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQY 306
Query: 356 G-------------CIVDLYSRAGRLEDALNVVENM 378
++D+YS+ G +E +L V M
Sbjct: 307 AEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRM 342
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 11/218 (5%)
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
+A R MP+ + L+ +RG F + + +++ G+ D T VL A
Sbjct: 4 AAARRGHGMPLWEC---NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRA-- 58
Query: 227 NVGTLGI---GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
VG L + G H +K F+ + ++L+++Y+ G ++ AR+VF M R LV
Sbjct: 59 -VGVLKLSVEGRKAHAAAVKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVL 117
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN ++ + G+ A+ M++ G PD V+ A+TACS A + G R M
Sbjct: 118 WNMMVRCYIRCGWYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMD 177
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
++ + + + ++D+Y++ LE+A+ + E MP +
Sbjct: 178 NVFGFNLPVAN--ALLDMYTKNDCLEEAVKLFEQMPAR 213
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/471 (38%), Positives = 257/471 (54%), Gaps = 54/471 (11%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I+ + + G EA F +M L G+ PN +T ++LLSGCA G ++
Sbjct: 332 VVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCA-------LAGTLL 384
Query: 105 HG-------LVCKLGLDRNN----VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWN 153
HG + L LD N+ +MV AL+DMY+K KS
Sbjct: 385 HGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSK---------------CKSP---- 425
Query: 154 AMIDGYMRRGDIESAVRMFDEMPVRD--AISWTALLNGFVKRGYFEEALECFREMQISG- 210
++A MFD +P +D ++WT L+ G + G EALE F +M
Sbjct: 426 ------------KAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDN 473
Query: 211 -VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK-VCNTLIDLYSRCGCIEF 268
V P+ TI L ACA +G L G IH YVL+ F+ + V N LID+YS+ G ++
Sbjct: 474 FVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDA 533
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
AR VF MH+R VSW S++ G+ ++G EAL+ F MQK G PDGV+F L ACSH
Sbjct: 534 ARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSH 593
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
+G+++ G+ YF+ M K + V P EHY C+VDL SRAGRL++A+ ++ MPMKP V
Sbjct: 594 SGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWV 653
Query: 389 SLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
+LL+ACR ++ L E L++L+ G D +Y LL+N+YA W +IR MK G
Sbjct: 654 ALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTG 713
Query: 449 IQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
I+K+PG S ++ G F AGD SH S+ IY +L L +K GYVP+
Sbjct: 714 IKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPD 764
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 200/366 (54%), Gaps = 20/366 (5%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFL 100
V V W S ++ + + G A F RMT G P+ ++ + +L CA +
Sbjct: 192 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSR-- 249
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +HG + GL +V VG A++DMYAK G M+ A VF+ M+VK +WNAM+ GY
Sbjct: 250 GKQVHGYALRSGL-FEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYS 308
Query: 161 RRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
+ G + A+ +F+++ + ++W+A++ G+ +RG EAL+ FR+M++ G EP+ V
Sbjct: 309 QIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVV 368
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLK-------QDFKDNVKVCNTLIDLYSRCGCIEFA 269
T++S+L+ CA GTL G H + +K D D++ V N LID+YS+C + A
Sbjct: 369 TLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAA 428
Query: 270 RQVFQRM--HKRTLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGF-KPDGVSFTGALTA 325
R +F + R++V+W +I G A +G EALE F+ M Q + F P+ + + AL A
Sbjct: 429 RAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMA 488
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
C+ G + G + + + S + C++D+YS++G ++ A V +NM + N V
Sbjct: 489 CARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQR-NGV 547
Query: 386 VLGSLL 391
SL+
Sbjct: 548 SWTSLM 553
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 187/397 (47%), Gaps = 85/397 (21%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPS-QCLFLGAMIHG 106
W I R G + + + RM G P+H TF +L C + PS +C GA +H
Sbjct: 94 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRC---GASVHA 150
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR---VKSSFTWNAMIDGYMRRG 163
+V G + NV VG L+ MY + G + A VFD MR V +WN+++ YM+ G
Sbjct: 151 VVFASGFEW-NVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGG 209
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D A++MF+ M E L G+ PD V++++VL
Sbjct: 210 DSIRAMKMFERM---------------------TEDL---------GIRPDAVSLVNVLP 239
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA+VG G +H Y L+ ++V V N ++D+Y++CG +E A +VF+RM + +VS
Sbjct: 240 ACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVS 299
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN+++ G++ G +AL F +++E + + V+++ + AG + GL +
Sbjct: 300 WNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVI-----AGYAQRGLGF----- 349
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTKGDI 400
+AL+V M + +PN V L SLL+ C G +
Sbjct: 350 --------------------------EALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTL 383
Query: 401 ILAERL----MKYLVDL---DPGVDSNYV-LLANMYA 429
+ + +K++++L DPG D + L +MY+
Sbjct: 384 LHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYS 420
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 118/282 (41%), Gaps = 44/282 (15%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH--KRTLVSWNSIIVGFAVN 294
IH+ +L Q + +I +Y A V +R+H T+ WN +I
Sbjct: 48 IHQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHL 104
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLRYFDIMK 343
GF+ + L+ + MQ+ G++PD +F L AC HA + G + +
Sbjct: 105 GFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVG 164
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK--PNEVVLGSLLAACRTKGDII 401
+V +Y R G E+A V + M + + V S++AA GD I
Sbjct: 165 N------------GLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSI 212
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMY---AAVGKWDGAGKIRRTMKGRGIQKKPGL-SS 457
A ++ + + + D G+ + V L N+ A+VG W R + G + GL
Sbjct: 213 RAMKMFERMTE-DLGIRPDAVSLVNVLPACASVGAWS------RGKQVHGYALRSGLFED 265
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSML---ELLSFDLKLCGY 496
+ +G+ + + A E+ ++ + +++S++ + GY
Sbjct: 266 VFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGY 307
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/460 (35%), Positives = 259/460 (56%), Gaps = 35/460 (7%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
+V V WTS I+ + R G EA F M G +P+ T T+L CA S L
Sbjct: 60 SVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGS--LEN 117
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +H + R N DM + F NA++D Y
Sbjct: 118 GKDVHNYI------REN--------DMQSNI------------------FVCNALMDMYA 145
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G +E A +F EMPV+D ISW ++ G+ K EAL F +M + ++PD T+
Sbjct: 146 KCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLAC 204
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+L ACA++ +L G +H ++L+ F + +V N L+D+Y +CG AR +F + +
Sbjct: 205 ILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKD 264
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
L++W +I G+ ++GF A+ FN M++ G +PD VSF L ACSH+GL+++G R+F+
Sbjct: 265 LITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFN 324
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+M+ V P++EHY CIVDL +R+G+L A +++MP++P+ + G+LL+ CR D+
Sbjct: 325 VMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDV 384
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
LAE++ +++ +L+P YVLLAN YA KW+ K+R+ + RG++K PG S IE+
Sbjct: 385 KLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEV 444
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
S +H F+AG+ SH +++ I +L+ L +K GY P+T
Sbjct: 445 KSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKT 484
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 174/366 (47%), Gaps = 48/366 (13%)
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTW-----NAMIDGYMRRGDIESAVRMFDEMP 176
++L A G + L V + VK+ W N ++D Y + G ++ A+ +FD M
Sbjct: 2 VSILQACANCGDVSLGRAVHGS-GVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
VR ++WT+L+ + + G +EA+ F EM GV PD TI +VL+ACA G+L G
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H Y+ + D + N+ VCN L+D+Y++CG +E A VF M + ++SWN++I G++ N
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHY 355
EAL F M E KPDG + L AC+ ++ G + I++ + ++ +
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVAN- 238
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMK---------------------------------- 381
+VD+Y + G A + + +P K
Sbjct: 239 -ALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE 297
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVD---LDPGVDSNYVLLANMYAAVGKWDGAG 438
P+EV S+L AC G + R + D + P ++ +Y + ++ A GK A
Sbjct: 298 PDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLE-HYACIVDLLARSGKLAMAY 356
Query: 439 KIRRTM 444
K ++M
Sbjct: 357 KFIKSM 362
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 94/170 (55%), Gaps = 13/170 (7%)
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++S+L ACAN G + +G +H +K CNTL+D+Y++CG ++ A VF M
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-- 335
RT+V+W S+I +A G EA+ F+ M +EG PD + T L AC+ G +E+G
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 336 ----LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+R D+ I+ + ++D+Y++ G +EDA +V MP+K
Sbjct: 121 VHNYIRENDMQSNIFVCNA-------LMDMYAKCGSMEDANSVFLEMPVK 163
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/456 (35%), Positives = 254/456 (55%), Gaps = 36/456 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ IS + + G ++A F +M GT PN TF T+L+ C S LG IH
Sbjct: 125 VSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSC--IGSSGFVLGRQIH 182
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ KL + +V VG++LLDMYAK G+ I
Sbjct: 183 SHIIKLNYE-AHVYVGSSLLDMYAKDGK-------------------------------I 210
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +F +P RD +S TA+++G+ + G EEALE FR +Q G++ +YVT SVL A
Sbjct: 211 HEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTAL 270
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ + L G +H ++L+ + V + N+LID+YS+CG + +AR++F +H+RT++SWN
Sbjct: 271 SGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWN 330
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLR-YFDIMK 343
+++VG++ +G E LE FN M E KPD V+ L+ CSH GL + G+ ++D+
Sbjct: 331 AMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTS 390
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
V P +HYGC+VD+ RAGR+E A V+ MP +P+ + G LL AC ++ +
Sbjct: 391 GKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIG 450
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E + L+ ++P NYV+L+N+YA+ G+W+ +R M + + K+PG S IE+
Sbjct: 451 EFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQV 510
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+H F A D SH E + + ++ LS K GYVP+
Sbjct: 511 LHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPD 546
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 129/224 (57%), Gaps = 1/224 (0%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+I Y++ + A +FD MP R+ +SWTA+++ + +RGY +AL F +M SG EP+
Sbjct: 99 LIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPN 158
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
T +VL +C +G IH +++K +++ +V V ++L+D+Y++ G I AR +FQ
Sbjct: 159 EFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQ 218
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
+ +R +VS +II G+A G EALE F +Q+EG + + V++T LTA S ++
Sbjct: 219 CLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDH 278
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
G + + + + V + ++D+YS+ G L A + + +
Sbjct: 279 GKQVHNHLLR-SEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTL 321
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 249/434 (57%), Gaps = 6/434 (1%)
Query: 43 NP-TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP T + + I H A + F RM P+ TF L C+ P+ L L
Sbjct: 91 NPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVPPDTHTFPFCLKACSLLPA--LSLA 148
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H K G + + V L+ +Y+ + A VF+ +K ++NA+I G+++
Sbjct: 149 QTLHSQAFKFGFGAD-LFVCNTLIHVYSVNKHLHHACQVFNETSLKDVVSYNALIGGFIK 207
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF-EEALECFREMQISGVEPDYVTIIS 220
GD + A R+FD+MP+RDA+SW LL G+ + G +A++ F M IS V PD + ++S
Sbjct: 208 VGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRMLISTVRPDNIALVS 267
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
L+ACA +G L G IH Y+ + N + L+DLY++CGCIE AR++F+ +
Sbjct: 268 ALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDLYAKCGCIETAREIFESSPDKN 327
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
L +WN+++VG ++G +L YF+ M + G KPDGVSF G L C HAGL+ + +F
Sbjct: 328 LFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILVGCGHAGLVCEARNFFQ 387
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M+ +YRV ++HYGC+ DL RAG + +A+ ++E MPM + V G +L CR G++
Sbjct: 388 EMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGGDVFVWGGVLGGCRIHGNV 447
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+AE+ + ++ L+P D Y ++A++YA G+W+ +IRR M R ++K PG S +++
Sbjct: 448 EIAEKAAENVMALNPEDDGVYSIMADIYANAGRWEDVARIRRLMHSRQVKKNPGCSLVQL 507
Query: 461 GSGI-HEFMAGDRS 473
+G+ H F+AG S
Sbjct: 508 NNGVFHGFVAGSAS 521
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 41/266 (15%)
Query: 148 SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ 207
+S T A + GY A+ +F+ +P + ++ AL F M+
Sbjct: 70 ASPTTPAALTGY--------ALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMR 121
Query: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS------ 261
V PD T L AC+ + L + +H K F ++ VCNTLI +YS
Sbjct: 122 RLSVPPDTHTFPFCLKACSLLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLH 181
Query: 262 -------------------------RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG- 295
+ G + AR++F +M R VSW +++ G+A +G
Sbjct: 182 HACQVFNETSLKDVVSYNALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGD 241
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
+A++ FN M +PD ++ AL+AC+ G +E G + + K R+
Sbjct: 242 LCMDAIQLFNRMLISTVRPDNIALVSALSACAQLGELEQG-KSIHVYIKQNRIPINAFLS 300
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMK 381
+VDLY++ G +E A + E+ P K
Sbjct: 301 TGLVDLYAKCGCIETAREIFESSPDK 326
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/451 (37%), Positives = 257/451 (56%), Gaps = 38/451 (8%)
Query: 36 NNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPS 95
+++ + TV W + I+ + +G +A F++M + +T + L CA
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACA---R 208
Query: 96 QCLF-LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNA 154
C+ +G + H L+ G + N M G++L+ MYAK G+
Sbjct: 209 TCMMKVGKLCHALLVTNGFEINCYM-GSSLISMYAKCGQ--------------------- 246
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+E A R+FD MP R+A+ WT++++G+ + G +EA++ FR+MQI+GV+ D
Sbjct: 247 ----------VEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVKVD 296
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
TI +V+++C +G L +G ++H Y ++ V N+LID+YS+CG I+ A +F
Sbjct: 297 DATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDIFC 356
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIE 333
M KR SW ++I+GFA NG GEAL+ F M++EG P+ ++F G LT+CSH GL+E
Sbjct: 357 GMVKRDNFSW-TVIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVE 415
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
G R+F M IY ++PRIEHYGC+VDL RA L +A ++ MP+ P+ V+ SLL A
Sbjct: 416 QGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLLFA 475
Query: 394 CRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKP 453
CRT G++ LAE + + + L+P VLL+ +YA +W A K+R + K+P
Sbjct: 476 CRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRKTKQP 535
Query: 454 GLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
G S IE+ +HEF AGD SH E+E IYS L
Sbjct: 536 GCSFIEVDGCVHEFFAGDESHFETEAIYSTL 566
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 139/297 (46%), Gaps = 33/297 (11%)
Query: 87 LSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRV 146
LS A PS + +GA +H L KLGL + ++ T L++MY+ A V D+
Sbjct: 100 LSTAARMPS--VVVGAQLHALSVKLGLSSDTFVLNT-LINMYSSCSYPSTARSVLDSAPK 156
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
+S D +SW ++ G++ G +AL+ F +M
Sbjct: 157 GAS-----------------------------DTVSWNTIIAGYIHAGLPNKALQAFSQM 187
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
V D VT+++ L ACA + +G H ++ F+ N + ++LI +Y++CG +
Sbjct: 188 AKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQV 247
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
E AR++F M R V W S+I G+ G EA++ F MQ G K D + + +++C
Sbjct: 248 EDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSC 307
Query: 327 SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPN 383
G ++ G RY I+ + I ++D+YS+ G ++ A ++ M + N
Sbjct: 308 GQMGALDLG-RYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDN 363
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 6/182 (3%)
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
D ++ + L+ A + ++ +G +H +K + V NTLI++YS C AR V
Sbjct: 92 DNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVL 151
Query: 274 QRMHK--RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
K VSWN+II G+ G +AL+ F+ M K D V+ AL AC+ +
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCM 211
Query: 332 IEDG-LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
++ G L + ++ + ++ + ++ +Y++ G++EDA + + MP + N V S+
Sbjct: 212 MKVGKLCHALLVTNGFEINCYMG--SSLISMYAKCGQVEDARRIFDGMPDR-NAVCWTSM 268
Query: 391 LA 392
++
Sbjct: 269 IS 270
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/461 (35%), Positives = 247/461 (53%), Gaps = 43/461 (9%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV WT+ I+ + +G EA R G P+ T + +L+ CA
Sbjct: 6 TVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACA------------- 52
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR-----VKSSFTWNAMIDGY 159
+ ++ V+ A R +S F A +D Y
Sbjct: 53 -------------------------RVADLETGEAVWAAARQEEGVAESVFVATAALDLY 87
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
++ G++E A +FDEM RDA++W A++ G+ G+ EAL+ F MQ+ G +PD T++
Sbjct: 88 VKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTVV 147
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
L+AC +G L +G V + N + LID+Y++CG A VFQ+M +R
Sbjct: 148 GALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGSTSEAWMVFQQMLER 207
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
++ WN++I+G + G A M+K G K + +F G L +C+H GL+ DG +YF
Sbjct: 208 DIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYF 267
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
M +YR+SPRIEHYGC+VDL+SRAG LE+A ++ +MPM N VV G+LL C+ +
Sbjct: 268 HNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRN 327
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
LAE +K L+ L+P NYV+L+N+Y+ G+W+ A K+R MK +GI+K P S +E
Sbjct: 328 ADLAEHALKQLIRLEPWNSGNYVMLSNIYSNSGRWEDAAKLRLEMKAKGIEKVPASSWVE 387
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ +H+F GD SH S+ IY+ L+ L ++K GY P T
Sbjct: 388 LDGKVHKFYVGDDSHPLSDKIYAKLDELGMEMKAMGYEPTT 428
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 109/205 (53%), Gaps = 2/205 (0%)
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
MP +SWTAL+ ++ G+ EA+ R SG+ PD T + VL ACA V L G
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 235 LWIHRYVLKQD-FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV 293
+ +++ ++V V +DLY +CG +E AR VF M R V+W +++ G+A
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE 353
NG EAL+ F +MQ EG KPD + GAL+AC+ G ++ G + ++ + +
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVL 180
Query: 354 HYGCIVDLYSRAGRLEDALNVVENM 378
++D+Y++ G +A V + M
Sbjct: 181 GTA-LIDMYAKCGSTSEAWMVFQQM 204
>gi|224031691|gb|ACN34921.1| unknown [Zea mays]
gi|414879789|tpg|DAA56920.1| TPA: tetratricopeptide-like helical [Zea mays]
Length = 460
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/440 (37%), Positives = 249/440 (56%), Gaps = 7/440 (1%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
T++I R GR +A F+R+ G PN TF T+L + +G +H
Sbjct: 10 TAAIGALTRGGRHRDALALFSRVLADGVAPNEFTFGTVLRSATALRVRAPRVGVQLHACA 69
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
KLGL +NV VG+ALLD YAK G M A D R + ++ A+I G ++ G + A
Sbjct: 70 AKLGLC-SNVFVGSALLDHYAKMGAMTEAQRALDDTREPNVVSYTALIAGLLKNGMFDEA 128
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
R+F MP R+ +SW A++ G+ + G EEA+ F EM GV P+ T VL + A+
Sbjct: 129 DRLFRRMPERNVVSWNAMIGGYSQAGLGEEAVNLFLEMCRGGVSPNESTFPCVLTSVASA 188
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
GTLG+G IH +K K +V + N+L+ Y+RCG +E + F++++++ +VSWN++I
Sbjct: 189 GTLGVGRSIHASAIKFLGKLDVYIGNSLVSFYARCGSLEDSVLAFKKINRKNVVSWNALI 248
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
G+A NG EAL+ + M+ G KPD V+ G L C+H GL+++G + + K R
Sbjct: 249 CGYAQNGKGEEALDAYRMMRATGLKPDNVTLLGLLFGCNHTGLVDEG---YALFKTAERE 305
Query: 349 SPRI---EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
P I EHY C+VDL SRA R ++A +E +P +P +LL C+ + LAE
Sbjct: 306 QPGILKPEHYACVVDLLSRAKRFDEARRFLEELPFEPGIGFWKALLGGCQIHWNSKLAES 365
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ K + LDP S+Y+LL+N+Y+A G W +R +K +G+++ G S IE+ +H
Sbjct: 366 VAKRIRALDPKDTSSYILLSNVYSASGSWQSVSMVRWEIKEKGLKRITGCSWIEVQEKVH 425
Query: 466 EFMAGDRSHIESEHIYSMLE 485
F GD H +S+ IYSMLE
Sbjct: 426 VFFNGDCRHHQSDEIYSMLE 445
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 39/234 (16%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I + ++G EA F M G +PN TF +L+ A + L +G IH
Sbjct: 141 VSWNAMIGGYSQAGLGEEAVNLFLEMCRGGVSPNESTFPCVLTSVAS--AGTLGVGRSIH 198
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
K L + +V +G +L+ YA+ G ++ + + F + K+ +WNA+I GY
Sbjct: 199 ASAIKF-LGKLDVYIGNSLVSFYARCGSLEDSVLAFKKINRKNVVSWNALICGY------ 251
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ G EEAL+ +R M+ +G++PD VT++ +L C
Sbjct: 252 -------------------------AQNGKGEEALDAYRMMRATGLKPDNVTLLGLLFGC 286
Query: 226 ANVGTLGIGLWIHRYVLKQD---FKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+ G + G + + ++ K C ++DL SR + AR+ + +
Sbjct: 287 NHTGLVDEGYALFKTAEREQPGILKPEHYAC--VVDLLSRAKRFDEARRFLEEL 338
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/434 (35%), Positives = 250/434 (57%), Gaps = 34/434 (7%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
V V WT+ I+ + ++ E F M GT PN +T +++L CA + L L
Sbjct: 190 VVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGL--EFLNL 247
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +IHG KLG+D + + NA+I Y
Sbjct: 248 GKLIHGYGIKLGVDPDVSLT--------------------------------NALIALYG 275
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G++E+A +FD M V++ +SW A++ + + A++ FR MQ V+ DY+T++S
Sbjct: 276 KCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVS 335
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
V++ACA++G L G W+H V ++ + NV + N LID+Y++CG I+ AR+VF+R+ R+
Sbjct: 336 VISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRS 395
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+VSW S+I A +G +AL+ F+ M+ EG KP+ +F TAC H+GL+E+G ++F+
Sbjct: 396 VVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFE 455
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + Y + P +EH C+VDL RAG L +A ++ MP++P+ V G+LL +CR ++
Sbjct: 456 SMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNL 515
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
LAE + + L LDP + YVL++N+YA G+W+ A ++R+ M+ R ++K PG S +E+
Sbjct: 516 ELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEV 575
Query: 461 GSGIHEFMAGDRSH 474
H F++G RS
Sbjct: 576 NRRFHTFLSGSRSQ 589
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 187/386 (48%), Gaps = 44/386 (11%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I + +G EA ++ M G P++ TF ++ CA + L G +H
Sbjct: 96 WNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSA--LREGKEVHCN 153
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGR---MDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ K G D ++V V ++L+ MY++ G M+L
Sbjct: 154 IVKHGFD-SDVFVQSSLVAMYSQSGETLGMEL---------------------------- 184
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+F EM VR+ +SWTA++ G+V+ YF+E L FREM SG +P+ VT++SVL A
Sbjct: 185 ------VFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPA 238
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA + L +G IH Y +K +V + N LI LY +CG +E AR +F M + LVSW
Sbjct: 239 CAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSW 298
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I + N A++ F MQ E D ++ ++AC+ G + G R+ + K
Sbjct: 299 NAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTG-RWMHELVK 357
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ + ++D+Y++ G ++ A V E +P + + V S++ AC + G A
Sbjct: 358 RKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCR-SVVSWTSMIGACASHGHGEDAL 416
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAA 430
+L + D GV N A ++ A
Sbjct: 417 KLFSRMK--DEGVKPNSFTFAAVFTA 440
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 136/284 (47%), Gaps = 24/284 (8%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ A +MFD+MP RD W L+ G+ G EEAL + M +G+ PD T V+ +
Sbjct: 78 MDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRS 137
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA + L G +H ++K F +V V ++L+ +YS+ G VF M R +VSW
Sbjct: 138 CAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSW 197
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G+ N + E L F M G +P+ V+ L AC+ GL + ++ K
Sbjct: 198 TAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACA-------GLEFLNLGKL 250
Query: 345 IY------RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
I+ V P + ++ LY + G +E A ++ + M ++ N V +++AA
Sbjct: 251 IHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQ-NLVSWNAMIAAYEQNN 309
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAA--------VGKW 434
A +L + + VD +Y+ + ++ +A G+W
Sbjct: 310 AGANAVKLFRRMQ--AEKVDFDYITMVSVISACASLGALNTGRW 351
>gi|222617104|gb|EEE53236.1| hypothetical protein OsJ_36137 [Oryza sativa Japonica Group]
Length = 542
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/442 (35%), Positives = 245/442 (55%), Gaps = 13/442 (2%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF----------LGAMIHGLVCKLG 112
EA F M G PN T +++ C + + L + G CK G
Sbjct: 100 EAVALFALMLWSGPRPNAFTVTSVIKCCLEGRAGLLLRARGRCVARSVREYWPGGRCKEG 159
Query: 113 LDR---NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAV 169
+D NV+VG ++ + G M A VFD M + +WN ++ GY+ GD +
Sbjct: 160 VDEMPVKNVVVGNTMVACNVRAGDMGAAREVFDGMAERDPISWNTLMSGYLHLGDTATVR 219
Query: 170 RMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVG 229
+FDEM VR+ SW ++ + G + ++ F M+ +G EPD T+ +++ACA +G
Sbjct: 220 ELFDEMTVRNVNSWNTMIAACSEEGSLADTVKVFNRMRATGFEPDAATMAVLMSACAQLG 279
Query: 230 TLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIV 289
+L I +H + K + N V N+LID+Y++CGCI A+ +F + + VS+N +I+
Sbjct: 280 SLTIAGQVHGLLQKSCVEMNCHVQNSLIDMYAKCGCISQAQFLFTETYPKDTVSYNVMII 339
Query: 290 GFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVS 349
FA +G +AL+ FN+M G +PD V+F G L+AC+HAGL+E G YF++MK Y V
Sbjct: 340 AFAQHGHARDALDLFNAMVDSGLQPDAVTFLGVLSACAHAGLVEYGKNYFELMKTTYAVQ 399
Query: 350 PRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKY 409
+HY C+VDLY RAG +E+A V+ MP+KP+ V G+LL ACR + + E K
Sbjct: 400 QSPDHYACVVDLYGRAGLIEEAHCFVKTMPVKPHAGVWGALLNACRKHCHVDVGEIAAKE 459
Query: 410 LVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMA 469
L+ ++P NYVLL N A +WD ++ +M+ + I K G S +E+ S +HEF+A
Sbjct: 460 LIRIEPKNPGNYVLLRNTLARGQQWDAVEDVQLSMRRKVIDKTAGCSWVEVDSVVHEFLA 519
Query: 470 GDRSHIESEHIYSMLELLSFDL 491
GD H + + IY++LE L +L
Sbjct: 520 GDFYHPKFDEIYTILEHLYMEL 541
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 101/241 (41%), Gaps = 43/241 (17%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
TV W + I+ G +A+ F RM G P+ T L+S CA S L +
Sbjct: 226 TVRNVNSWNTMIAACSEEGSLADTVKVFNRMRATGFEPDAATMAVLMSACAQLGS--LTI 283
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
+HGL+ K ++ N V +L+DMYAK G + A +F K + ++N MI +
Sbjct: 284 AGQVHGLLQKSCVEM-NCHVQNSLIDMYAKCGCISQAQFLFTETYPKDTVSYNVMIIAF- 341
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G+ +AL+ F M SG++PD VT +
Sbjct: 342 ------------------------------AQHGHARDALDLFNAMVDSGLQPDAVTFLG 371
Query: 221 VLNACANVGTLGIG-----LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
VL+ACA+ G + G L Y ++Q V +DLY R G IE A +
Sbjct: 372 VLSACAHAGLVEYGKNYFELMKTTYAVQQSPDHYACV----VDLYGRAGLIEEAHCFVKT 427
Query: 276 M 276
M
Sbjct: 428 M 428
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/455 (36%), Positives = 251/455 (55%), Gaps = 34/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W + I SG++ EA F RM P+ +T++ +LS CA P L G IH
Sbjct: 313 IAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACAR-PGG-LACGKEIH 370
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
K GL ++V G AL++MY+K G +
Sbjct: 371 ARAVKDGL-VSDVRFGNALINMYSK-------------------------------AGSM 398
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A ++FD MP RD +SWTAL+ G+ G E+ F++M GVE + +T + VL AC
Sbjct: 399 KDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKAC 458
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+N L G IH V+K ++ V N L+ +Y +CG +E A +V + M R +V+WN
Sbjct: 459 SNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWN 518
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G A NG EAL+ F M+ E +P+ +F ++AC L+E+G R F M+K
Sbjct: 519 TLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKD 578
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P +HY C+VD+ +RAG L +A +V+ MP KP+ + G+LLAACR G++ + E+
Sbjct: 579 YGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQ 638
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ + L+P YV L+ +YAA G W K+R+ MK RG++K+PG S IE+ +H
Sbjct: 639 AAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVH 698
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F+AGD+SH +E IYS LE L+ +K GYVP+T
Sbjct: 699 SFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDT 733
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 185/384 (48%), Gaps = 38/384 (9%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K + V W IS + G EA FT M G P+ TF+++LS C+ P+ L
Sbjct: 104 KFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSS-PA-AL 161
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G +H V + GL NN VG AL+ MYAK
Sbjct: 162 NWGREVHVRVMEAGLA-NNATVGNALISMYAKC--------------------------- 193
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
G + A R+FD M RD +SWT L + + GY +E+L+ + M GV P +T
Sbjct: 194 ----GSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITY 249
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
++VL+AC ++ L G IH +++ + +V+V L +Y +CG ++ AR+VF+ +
Sbjct: 250 MNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPN 309
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R +++WN++I G +G + EA F+ M KE PD V++ L+AC+ G + G
Sbjct: 310 RDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEI 369
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
K VS + ++++YS+AG ++DA V + MP K + V +L+ G
Sbjct: 370 HARAVKDGLVSD-VRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALVGGYADCG 427
Query: 399 DIILAERLMKYLVDLDPGVDSNYV 422
++ E + L GV++N +
Sbjct: 428 QVV--ESFSTFKKMLQQGVEANKI 449
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 178/386 (46%), Gaps = 40/386 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ + SG E+ + M G P+ IT++ +LS C + L G IH
Sbjct: 212 VSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAA--LEKGKQIH 269
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ + ++V V TAL MY K G +
Sbjct: 270 AQIVE-SEHHSDVRVSTALTKMYIKCG-------------------------------AV 297
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A +F+ +P RD I+W ++ G V G EEA F M V PD VT +++L+AC
Sbjct: 298 KDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSAC 357
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A G L G IH +K +V+ N LI++YS+ G ++ ARQVF RM KR +VSW
Sbjct: 358 ARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWT 417
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKK 344
+++ G+A G V E+ F M ++G + + +++ L ACS+ ++ G + +++K
Sbjct: 418 ALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKA 477
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ + ++ +Y + G +EDA+ V E M + + V +L+ G + E
Sbjct: 478 --GIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTR-DVVTWNTLIGGLAQNGRGL--E 532
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAA 430
L K+ V + N N+ +A
Sbjct: 533 ALQKFEVMKSEEMRPNATTFVNVMSA 558
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 125/233 (53%), Gaps = 13/233 (5%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N ++ Y+ G + A R+FD+ + +SW +++G+ RG +EA F MQ G+E
Sbjct: 83 NTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLE 142
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD T +S+L+AC++ L G +H V++ +N V N LI +Y++CG + AR+V
Sbjct: 143 PDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRV 202
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F M R VSW ++ +A +G+ E+L+ +++M +EG +P +++ L+AC +
Sbjct: 203 FDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAAL 262
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYG------CIVDLYSRAGRLEDALNVVENMP 379
E G K+I+ EH+ + +Y + G ++DA V E +P
Sbjct: 263 EKG-------KQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLP 308
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 131/287 (45%), Gaps = 34/287 (11%)
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
G++ A + + + G + D + +L +C L +G +H ++L+ K NV +
Sbjct: 24 GWYAPA-DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYII 82
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
NTL+ LY CG + AR++F + +++VSWN +I G+A G EA F MQ+EG +
Sbjct: 83 NTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLE 142
Query: 314 PDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
PD +F L+ACS + G + +M+ + + + ++ +Y++ G + DA
Sbjct: 143 PDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGN--ALISMYAKCGSVRDAR 200
Query: 373 NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
V + M + +EV +L A G E L Y L GV + + N+ +A G
Sbjct: 201 RVFDAMASR-DEVSWTTLTGAYAESG--YAQESLKTYHAMLQEGVRPSRITYMNVLSACG 257
Query: 433 KWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEH 479
L+++E G IH + +ESEH
Sbjct: 258 ---------------------SLAALEKGKQIHAQI------VESEH 277
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 170/454 (37%), Positives = 253/454 (55%), Gaps = 35/454 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHG-TNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
WT+ IS + R EA + M H + N T + L+ A PS L +G IHG
Sbjct: 218 WTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPS--LHMGKKIHG 275
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
+ ++GLD + V V +LLDMY K G IE
Sbjct: 276 HIMRMGLDSDEV-VWCSLLDMYGKC-------------------------------GSIE 303
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A +FD+M RD +SWT +++ ++K G EE FR + S + P+ T VLNACA
Sbjct: 304 EARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACA 363
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
++ +G IH Y+++ F + L+ +YS+CG IE A+ VF+ + + L SW S
Sbjct: 364 DLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTS 423
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
++VG+A +G +AL +F + K G KPDG++F G L+AC+HAGL++ GL YF +K+ +
Sbjct: 424 LLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKH 483
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
++ I+HY CI+DL +RAG+ +A +++ MP+KP++ + +LL CR G++ LA+R
Sbjct: 484 GLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRA 543
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHE 466
K L +++P + YV LAN+YA+ G IR TM RGI KKPG+S IEI +H
Sbjct: 544 AKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHV 603
Query: 467 FMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F GD SH +S+ I L LS +K GYVP+T
Sbjct: 604 FSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDT 637
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 172/350 (49%), Gaps = 23/350 (6%)
Query: 56 CRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDR 115
C R+ EA R+ P ++TLL C + L G +H + G
Sbjct: 99 CGQSRLREAVQLLYRIE----KPYASIYLTLLKFC--LKQRALKEGKQVHAHIKTSG--S 150
Query: 116 NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM 175
+ + LLDMYAK G + A VFD M + +WN MI GY++ G+ E A +FD+M
Sbjct: 151 IGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKM 210
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGV-EPDYVTIISVLNACANVGTLGIG 234
P RD SWTA+++G V+ EEALE +R MQ + + TI S L A A + +L +G
Sbjct: 211 PNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMG 270
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
IH ++++ + V +L+D+Y +CG IE AR +F +M +R +VSW ++I + N
Sbjct: 271 KKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKN 330
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI-- 352
G E F + P+ +F G L AC+ L D+ K+I+ R+
Sbjct: 331 GRREEGFALFRHLMNSNIMPNDFTFAGVLNACA-------DLAAEDLGKQIHAYMVRVGF 383
Query: 353 ----EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
+V +YS+ G +E+A +V E +P +P+ SLL G
Sbjct: 384 DSFSSAASALVHMYSKCGDIENAKSVFEILP-QPDLFSWTSLLVGYAQHG 432
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 36/253 (14%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ I + ++GR E F + PN TF +L+ CAD ++ LG I
Sbjct: 317 VVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAE--DLGKQI 374
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + ++G D + +AL+ MY+K G ++ A VF+ + F+W +++ GY + G
Sbjct: 375 HAYMVRVGFDSFS-SAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQ 433
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++AL F + SG +PD + I VL+A
Sbjct: 434 -------------------------------HDKALHFFELLLKSGTKPDGIAFIGVLSA 462
Query: 225 CANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLV 282
CA+ G + GL + H K + +IDL +R G A + M K
Sbjct: 463 CAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKY 522
Query: 283 SWNSIIVGFAVNG 295
W +++ G ++G
Sbjct: 523 IWAALLGGCRIHG 535
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 239/386 (61%), Gaps = 3/386 (0%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVR-MFDEM 175
NV+ T+++ Y K G M A V+FD+M VK +WN M+ GYM GD + R +FD+M
Sbjct: 166 NVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQM 225
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG- 234
P+++ ++W+ ++ G+ + G +ALE F + ++PD I+ +++AC+ +G +
Sbjct: 226 PMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAE 285
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
IH YV D ++V +LID+Y++CG IE A Q+F+ H + L+ ++++I A +
Sbjct: 286 SIIHNYVGPSLLSD-LRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANH 344
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
G +A+ F+ MQ+ KPD V+F G LTAC+H GL+++G +YF M + + + P +H
Sbjct: 345 GLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKH 404
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
Y C+VDL R G LE+A N++ NMP+ P+ VV G+LLAACR ++ LAE L ++
Sbjct: 405 YACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIE 464
Query: 415 PGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSH 474
P NY+LL+N+YAA G+W K+R ++ ++K G S IE+ +HEF+ GD SH
Sbjct: 465 PDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSH 524
Query: 475 IESEHIYSMLELLSFDLKLCGYVPET 500
+S+ I +L LL D+KL GY+ ++
Sbjct: 525 TDSDSISLILYLLCEDMKLSGYLIDS 550
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 146/308 (47%), Gaps = 18/308 (5%)
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A ++ ++ S F N ++ Y R G + A ++FDE+ +A WT+L++G+V+ +
Sbjct: 23 ARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQY 82
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
+EA F +M+ + TI SVL A A + G ++ + + + ++ N +
Sbjct: 83 DEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFAFDEMCEKDIVSWNMM 142
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
I Y ++ AR+ F RM +R +VSW S+I G+ G + EA F+SM +
Sbjct: 143 ISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWN 202
Query: 317 VSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V +G + G +G R FD M V+ + ++ Y+R G+ AL +
Sbjct: 203 VMVSGYMD----IGDYTNGARCLFDQMPMKNLVT-----WSTMIGGYARNGQPLKALELF 253
Query: 376 ENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN---YVLLANMYA 429
E +KP+E + +++AC G I AE ++ V P + S+ + L +MYA
Sbjct: 254 ERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYV--GPSLLSDLRVFTSLIDMYA 311
Query: 430 AVGKWDGA 437
G + A
Sbjct: 312 KCGSIEKA 319
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 49/239 (20%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA--- 102
V W++ I + R+G+ +A F R P+ + ++S C SQ + A
Sbjct: 231 VTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISAC----SQLGIIDAAES 286
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+IH V L +++ V T+L+DMYAK G
Sbjct: 287 IIHNYVGPSLL--SDLRVFTSLIDMYAKCG------------------------------ 314
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
IE A++MF+ +D + ++ ++ G +A+ F +MQ + ++PD VT + VL
Sbjct: 315 -SIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVL 373
Query: 223 NACANVGTLGIGLWIHRYVLKQ-----DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
AC + G + G R KQ + + K ++DL R GC+E A + + M
Sbjct: 374 TACNHGGLVDEG----RKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNM 428
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 182/515 (35%), Positives = 259/515 (50%), Gaps = 77/515 (14%)
Query: 62 AEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG 121
+EA + F RM G P+ +TF +L+ A + + G IH GL NV+VG
Sbjct: 11 SEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGL-LPNVVVG 69
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR--- 178
TA++ MY K GR+D A F+ ++ K+S TWNAM+ Y G A+ +F EM R
Sbjct: 70 TAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRS 129
Query: 179 ----------------------------------------DAISWTALLNGFVKRGYFEE 198
D + TALLN + K G EE
Sbjct: 130 ARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEE 189
Query: 199 --------------------------------ALECFREMQ-ISGVEPDYVTIISVLNAC 225
AL+ +R M + + P T ++V++ C
Sbjct: 190 ARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVC 249
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A + L G IH V +F N+ V N L+ +Y +CGC++ A VF M + +SWN
Sbjct: 250 AELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWN 309
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+II +A +G +AL + M +G KP V+F G L+ACSH GL+ DGL YF M+
Sbjct: 310 TIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDD 369
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+R+ P + H+GCI+DL R GRL +A V+++MP++ N V SLL AC+T GD+ R
Sbjct: 370 HRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVR 429
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+VD P YVLL+N+YAA G+W KIR+ M RG++K PG S IEIG +H
Sbjct: 430 AADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVH 489
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
EF++GDRSH + E IY L + ++K GYVP+T
Sbjct: 490 EFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDT 524
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 5/217 (2%)
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI--GLWIHRYVLKQ 244
+ F G EAL FR M SG PD VT +L A A +G I G IHRY
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
NV V +I +Y +CG ++ AR F+ + + V+WN+++ + ++G EALE F
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120
Query: 305 NSM--QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG-CIVDL 361
M + +PD SF+ A+ ACS+ +E G +++++ + + G ++++
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
YS+ G LE+A V +++ + V +++AA G
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHG 217
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 32/184 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W + IS + G +A L + M L G P +TF+ LLS C+ H
Sbjct: 306 ISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACS-------------H 352
Query: 106 GLVCKLGLD-----------RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS-SFTWN 153
G + GLD + +V ++D+ + GR+ A +V +M +++ + W
Sbjct: 353 GGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWM 412
Query: 154 AMIDGYMRRGDIESAVRMFDEMPVRDAISWTA-----LLNGFVKRGYFEEALECFREMQI 208
+++ GD++ VR D+ V D + WT+ L N + G +++ + + M
Sbjct: 413 SLLGACKTHGDLKRGVRAADQ--VVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAA 470
Query: 209 SGVE 212
GV+
Sbjct: 471 RGVK 474
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/493 (33%), Positives = 261/493 (52%), Gaps = 42/493 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V + + IS +GR A F RM G P T +++L+ C L G I
Sbjct: 120 SVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLD--LRRGKQI 177
Query: 105 HG--LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
HG ++C LG NV V AL D+YA+ G +D A +FD M +++ TWN MI GY++
Sbjct: 178 HGRIIICNLG---GNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKN 234
Query: 163 GDIESAVRMFDEMPV-----------------------------------RDAISWTALL 187
E + +F EM V +D + WT ++
Sbjct: 235 RQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMI 294
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
G + G E+AL F EM + PD TI SV+++CA + +L G +H
Sbjct: 295 VGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVN 354
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
D++ V + L+D+Y +CG A +F M R +VSWNS+I G+A+NG EAL + +M
Sbjct: 355 DDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENM 414
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+E KPD V+F G L+AC HAGL+E+G YF M + + P +HY C+V+L+ R+G
Sbjct: 415 LEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGH 474
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
++ A++++ +M +PN ++ ++L+ C KGDI E + L++L+P Y++L+NM
Sbjct: 475 MDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNM 534
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
YAA G+W IR MK + ++K S IEI + +H+F+A DR+H +++ I+ L L
Sbjct: 535 YAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRL 594
Query: 488 SFDLKLCGYVPET 500
L+ G+ P T
Sbjct: 595 IRKLQEAGFSPNT 607
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 179/345 (51%), Gaps = 23/345 (6%)
Query: 116 NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM 175
N+ + LL++YAK G + A +FD M + +F+WNAM+ Y + G +E +FD M
Sbjct: 56 NDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNM 115
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
P RD++S+ +++GF G AL F MQ G++P T +SVLNAC + L G
Sbjct: 116 PSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGK 175
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
IH ++ + NV VCN L DLY+RCG I+ AR++F RM R +V+WN +I G+ N
Sbjct: 176 QIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNR 235
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
+ ++ F+ MQ KPD V+ + L A AG I++ + F +++ V I
Sbjct: 236 QPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIV 295
Query: 356 GCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRT-----KGDIILAERLM 407
GC ++ G+ EDAL + M + +P+ + S++++C G ++ + +
Sbjct: 296 GC-----AQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFL 350
Query: 408 KYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
GV+ + ++ L +MY G A I TM+ R +
Sbjct: 351 M-------GVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNV 388
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 172/460 (37%), Positives = 249/460 (54%), Gaps = 34/460 (7%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
V V WT I G+ EA F + G P+ + +L CA L
Sbjct: 166 VVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGD--LES 223
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G I + + GL RN V V T+L+DMY K
Sbjct: 224 GRWIDRCMRECGLSRN-VFVATSLVDMYTKC----------------------------- 253
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G +E A +FD M +D + W+A++ G+ G EA+E F EM+ V PD ++
Sbjct: 254 --GSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVG 311
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
L++CA++G L +G W + ++F N + +LID Y++CG +E A V++ M ++
Sbjct: 312 ALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKD 371
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
V +N++I G A+ G VG A F M K G P+ +F G L C+HAGL++DG YF+
Sbjct: 372 RVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFN 431
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M + V+P IEHYGC+VDL +RAG L++A N+++ MPMK N +V GSLL CR +
Sbjct: 432 SMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRET 491
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
LAE ++K L++L+P +YVLL+N+Y+A +WD A KIR T+ +G+QK PG S +E+
Sbjct: 492 QLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEV 551
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+HEF+ GD SH S+ IY LE L DLK GY P T
Sbjct: 552 DGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTT 591
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 176/377 (46%), Gaps = 36/377 (9%)
Query: 24 NLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITF 83
N + Q I + T + T + + I R A + M P+ TF
Sbjct: 48 NFSNNAQYPILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTF 107
Query: 84 ITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDA 143
+L CA LG MIH LV K G D +V V T ++ Y+K G + A VFD
Sbjct: 108 SFVLKACARL--NLFHLGVMIHSLVFKTGFD-CDVFVKTNVVCFYSKCGFLRDAWKVFDD 164
Query: 144 MRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF 203
M VK+ +W MI G ++ G F EA++ F
Sbjct: 165 MVVKNVVSWTGMI-------------------------------CGCIEFGKFREAVDLF 193
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
R + SG+ PD I+ VL ACA +G L G WI R + + NV V +L+D+Y++C
Sbjct: 194 RGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKC 253
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
G +E AR VF M ++ +V W+++I G+A NG EA+E F M+K +PD + GAL
Sbjct: 254 GSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGAL 313
Query: 324 TACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPN 383
++C+ G +E G +M +S + ++D Y++ G +E+AL V + M K +
Sbjct: 314 SSCASLGALELGNWAKGLMNYEEFLSNPVLGTS-LIDFYAKCGSMEEALGVYKMMKEK-D 371
Query: 384 EVVLGSLLAACRTKGDI 400
VV ++++ G +
Sbjct: 372 RVVFNAVISGLAMYGQV 388
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/430 (37%), Positives = 252/430 (58%), Gaps = 15/430 (3%)
Query: 77 NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
P+H TF +L +Q L L A +H L+ KLG + ALL Y R DL
Sbjct: 98 RPDHFTFPQILPS-----AQPLHLVAQLHALLLKLGF-HAHTQSLNALLAAYLANARPDL 151
Query: 137 ATVVF----DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVK 192
A+ VF A+ V S W M+ G ++ G + A +FD MP R+ +SW A+++G+VK
Sbjct: 152 ASRVFRGGGGALDVVS---WTTMVGGLLKLGLFDDARVLFDGMPERNLVSWNAMMSGYVK 208
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
F +ALE F EM+ GV+ + + + AC G L G +HR+V + + + K+
Sbjct: 209 ACRFLDALEVFDEMRARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSGIQMDEKL 268
Query: 253 CNTLIDLYSRCGCIEFARQVFQRM--HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
++D+Y +CGC+E A +VF+ + + L +WN +I GFAV+G +AL+ F M++E
Sbjct: 269 ATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGEDALKLFGRMERE 328
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
G PD V+ LTAC+HAG++ +G YF+ + + Y + P++EHYGC+VDLY RAGRLE+
Sbjct: 329 GVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGRLEE 388
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
A V+++MPM+P+ VLG+L A + GD+ L E + +++LDP YVLLAN+ A
Sbjct: 389 AKKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLAT 448
Query: 431 VGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFD 490
G+W+ ++RR M R + K+ G S IE+ + EF G H +E +Y+M + +
Sbjct: 449 AGRWEDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGLCHPRAEEVYAMARDMMRE 508
Query: 491 LKLCGYVPET 500
++ GYVP+T
Sbjct: 509 IRAEGYVPDT 518
>gi|357118743|ref|XP_003561109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Brachypodium distachyon]
Length = 535
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 157/410 (38%), Positives = 252/410 (61%), Gaps = 21/410 (5%)
Query: 105 HGLVCKLG-LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
H L+ K G + +G+AL+ YAK +D A VFD M + + +NA++ Y R G
Sbjct: 110 HALLVKSGHFASGDPFLGSALVSFYAKSRLLDEARRVFDEMPRRDTAVYNALLSAYARCG 169
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVL 222
+++A ++F EM R+ +SWTA+++G+ + G E A+E F EM + +GV+P+ +T+ SVL
Sbjct: 170 LVDAAEKLFGEMTERNVVSWTAMVSGYAQNGRHEAAVETFLEMWEGAGVQPNELTVSSVL 229
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTL 281
ACA VG + +G + Y + NV V N L+++Y++CG I+ A QVFQ + H+R L
Sbjct: 230 PACAAVGAMELGTKVEEYARGKGHLGNVFVTNALLEMYAKCGSIQRAWQVFQGIGHRRDL 289
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKE------------------GFKPDGVSFTGAL 323
SWN++I+ FAV+G EAL F+ ++ G KPDG++F G +
Sbjct: 290 CSWNTMIMAFAVHGLWMEALALFHKLRVRISCSNSLVYFFSIPTHMTGVKPDGITFVGVI 349
Query: 324 TACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPN 383
AC+H GL+++G F+ M+ + ++PRIEHYGC+VDL RAG L++A +++ +MP +P+
Sbjct: 350 LACTHGGLVDEGKLIFNSMEADFSINPRIEHYGCMVDLLGRAGLLKEAYSMIISMPAEPD 409
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRT 443
V+ G+LL AC G+I LAE + L+ L+P +N V+L+N+YA+ GKWDG ++ +
Sbjct: 410 AVIWGALLGACSFHGNIELAETAVDKLMYLEPQNTANLVILSNIYASSGKWDGVAQVWKL 469
Query: 444 MKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493
+K + +K G S IE+ +H+F+ D SH E IY L+ ++ +KL
Sbjct: 470 LKEKDHKKSAGYSFIELDGRMHKFLVEDMSHPIFEEIYKTLDSVTMIMKL 519
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 150/372 (40%), Gaps = 65/372 (17%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V WT+ +S + ++GR A F M G PN +T ++L CA + + LG
Sbjct: 186 VVSWTAMVSGYAQNGRHEAAVETFLEMWEGAGVQPNELTVSSVLPACAAVGA--MELGTK 243
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSF-TWNAMIDGYMRR 162
+ G NV V ALL+MYAK G + A VF + + +WN MI +
Sbjct: 244 VEEYARGKG-HLGNVFVTNALLEMYAKCGSIQRAWQVFQGIGHRRDLCSWNTMIMAFAVH 302
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G A+ +F ++ VR + S N V YF ++GV+PD +T + V+
Sbjct: 303 GLWMEALALFHKLRVRISCS-----NSLV---YFFSI-----PTHMTGVKPDGITFVGVI 349
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRMHKRT 280
AC + G + G I ++ DF N ++ + ++DL R G ++
Sbjct: 350 LACTHGGLVDEGKLIFN-SMEADFSINPRIEHYGCMVDLLGRAGLLK------------- 395
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
EA SM E PD V + L ACS G IE D
Sbjct: 396 ------------------EAYSMIISMPAE---PDAVIWGALLGACSFHGNIELAETAVD 434
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
K +Y + + ++Y+ +G+ + V + + K ++ G I
Sbjct: 435 --KLMYLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSF--------I 484
Query: 401 ILAERLMKYLVD 412
L R+ K+LV+
Sbjct: 485 ELDGRMHKFLVE 496
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 175/466 (37%), Positives = 269/466 (57%), Gaps = 44/466 (9%)
Query: 43 NP-TVQWTSSISRHCRSGRIAEAALE-FTRMTLHGT-NPNHITFITLLSGCADFPSQCLF 99
NP + W + I RS E A+E F RM G+ P+ TF LL CA + L
Sbjct: 86 NPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFLLKACAYVFA--LS 143
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
G H + KLGLD + V VG +L+ +YA G + +A VF+ M ++S +WN MID Y
Sbjct: 144 EGRQAHAQIFKLGLDLD-VYVGNSLIHLYASCGCLSMALKVFEKMPLRSLVSWNVMIDAY 202
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
++ G E+A+++F EM N F EPD T+
Sbjct: 203 VQSGLFENALKLFVEMQ-----------NSF---------------------EPDGYTMQ 230
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQ---DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
S+++ACA +G L +G+W H YVL++ +V + ++L+D+YS+CG + A+QVF+ M
Sbjct: 231 SIVSACAGIGALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETM 290
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDG 335
K L SWNS+I+ A++G AL+ F+ + + E F P+ V+F G L+AC+H G++ DG
Sbjct: 291 PKHDLNSWNSMILALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVGVLSACNHGGMVADG 350
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC- 394
+YFD+M Y++ PR+EHYGC+VDL SR+G +++AL +V NM +KP+ V+ SLL AC
Sbjct: 351 RKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAVIWRSLLDACY 410
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSN-YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKP 453
+ + L+E + ++ + + S YV+L+ +YA+ +W+ G IR+ M G+ K+P
Sbjct: 411 KQNAGVELSEEVAFKILQSEKTISSGVYVMLSRVYASARQWNDVGIIRKVMTDMGVTKEP 470
Query: 454 GLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
G SSIEI HEF AGD SH + IY +++L+ L+ GY P+
Sbjct: 471 GCSSIEIDGISHEFFAGDTSHPRIKEIYGVIDLIEEKLERRGYSPD 516
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 5/220 (2%)
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKR-GYFEEALECFREMQISG-VEPDYVTIISV 221
D + A R+F+++ ++ W L+ + E+A+E F M G VEPD T +
Sbjct: 73 DFDYACRVFNQIDNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFL 132
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L ACA V L G H + K +V V N+LI LY+ CGC+ A +VF++M R+L
Sbjct: 133 LKACAYVFALSEGRQAHAQIFKLGLDLDVYVGNSLIHLYASCGCLSMALKVFEKMPLRSL 192
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL--RYF 339
VSWN +I + +G AL+ F MQ F+PDG + ++AC+ G + G+ +
Sbjct: 193 VSWNVMIDAYVQSGLFENALKLFVEMQN-SFEPDGYTMQSIVSACAGIGALSLGMWAHAY 251
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
+ K ++ + +VD+YS+ G L A V E MP
Sbjct: 252 VLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETMP 291
>gi|242047514|ref|XP_002461503.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
gi|241924880|gb|EER98024.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
Length = 786
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 237/403 (58%), Gaps = 2/403 (0%)
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR-VKSSFTWNAMID 157
+GA +H L K G ++ V AL+ Y G + VFD + V+ TWNA++
Sbjct: 147 LMGAHVHALAVKAG-AAGDLYVRNALIHFYGVCGDVAAMRKVFDELPLVRDVVTWNAVLA 205
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
GY+R G + A +FD MP+RD +SW+ ++ G+VK G E AL F+ M + GV+ +
Sbjct: 206 GYVRAGMVGVAREVFDGMPMRDEVSWSTVVGGYVKEGELEVALGVFKNMVVQGVKANEAA 265
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I++ L+A A +G L G ++H + + ++ + L+D+YS+CG + A++VF M
Sbjct: 266 IVTALSAAAQLGLLEQGKFVHEVIKRAGVAMSMNLGAALVDMYSKCGSVAAAKEVFDAMP 325
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
R + +WNS+I G A +G +A++ F EGF P ++F G L ACS GL+++G
Sbjct: 326 WRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTNITFVGVLNACSRTGLVDEGRW 385
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
YF +M + Y + +EHYGC+VDL SRAG +++A+ ++E M + P+ V+ G++L+AC+
Sbjct: 386 YFKLMAEKYGIESEMEHYGCMVDLLSRAGLVQEAIELIEGMHIPPDPVLWGTVLSACKRH 445
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G + L + L++LDP D YVLLA++YA KWD K+R+ M RG K G S
Sbjct: 446 GLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWSL 505
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+E +H+F+ GD H +S IY+ML ++ L GYVP+
Sbjct: 506 MEAHGIVHKFLVGDMDHKDSVQIYNMLCMIDRRLAEAGYVPDV 548
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 227/391 (58%), Gaps = 4/391 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F+ M +P+ T L ++ + LG +H V +LG R+ V A L++
Sbjct: 94 FSLMKTRAISPDEYTLAPLFKSASNL--RYYVLGGCVHAHVVRLGFTRH-ASVRVAALEV 150
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YA RM A+ VFD MR WN MI G+ + GD+E+ +++F +M R +SW ++
Sbjct: 151 YASCERMGDASKVFDEMRDPDVVVWNLMIRGFCKMGDLETGMKVFGQMKERTVVSWNLMM 210
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF- 246
+ K E+ALE F EM G EPD ++++VL CA +G + IG WIH Y + F
Sbjct: 211 SCLAKNNKEEKALELFNEMLEQGFEPDDASLVTVLPVCARLGAVDIGEWIHSYANSKGFL 270
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
+D + V N+L+D Y +CG ++ A +F M + +VSWN++I G A NG + F
Sbjct: 271 QDTINVGNSLVDFYCKCGNLQAAWSIFNDMASKNVVSWNAMISGLAYNGEGEVGVNLFEE 330
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M GF+P+ +F G L C+H GL++ G F M ++VSP++EHYGC+VDL R G
Sbjct: 331 MVHGGFEPNDSTFVGVLACCAHVGLVDRGRDLFASMSVKFKVSPKLEHYGCVVDLLGRCG 390
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN 426
+ +A +++ +MP+KP + G+LL+ACRT GD +AE K LV L+P NYVLL+N
Sbjct: 391 HVREARDLITSMPLKPTAALWGALLSACRTYGDREIAENAAKELVRLEPWNSGNYVLLSN 450
Query: 427 MYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
+YA G+WD K+R M+G G++K PG S+
Sbjct: 451 VYAEEGRWDEVEKVRVLMRGGGVKKVPGQSA 481
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 124/309 (40%), Gaps = 37/309 (11%)
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+RR + A R+F + + + A++ F + F M+ + PD T+
Sbjct: 53 LRR--VPYATRLFAHTHNPNILLFNAIIKAHSLHPPFHASFSFFSLMKTRAISPDEYTLA 110
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+ + +N+ +G +H +V++ F + V +++Y+ C + A +VF M
Sbjct: 111 PLFKSASNLRYYVLGGCVHAHVVRLGFTRHASVRVAALEVYASCERMGDASKVFDEMRDP 170
Query: 280 TLVSWNSIIVGF-------------------------------AVNGFVGEALEYFNSMQ 308
+V WN +I GF A N +ALE FN M
Sbjct: 171 DVVVWNLMIRGFCKMGDLETGMKVFGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEML 230
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
++GF+PD S L C+ G ++ G + I +VD Y + G L
Sbjct: 231 EQGFEPDDASLVTVLPVCARLGAVDIGEWIHSYANSKGFLQDTINVGNSLVDFYCKCGNL 290
Query: 369 EDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD--LDPGVDSNYVLLAN 426
+ A ++ +M K N V ++++ G+ + L + +V +P DS +V +
Sbjct: 291 QAAWSIFNDMASK-NVVSWNAMISGLAYNGEGEVGVNLFEEMVHGGFEPN-DSTFVGVLA 348
Query: 427 MYAAVGKWD 435
A VG D
Sbjct: 349 CCAHVGLVD 357
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 158/452 (34%), Positives = 264/452 (58%), Gaps = 12/452 (2%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W ++ RSG + EA F RM N +++ T++SG A G+
Sbjct: 167 WNILLAALVRSGTMDEARRLFERMP----ERNVMSWTTMISGLARS-------GSADEAR 215
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
G+ NV+ A++ YA+ R+D A +F M + +WN MI G+++ D++
Sbjct: 216 ALFDGMPERNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKK 275
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +FDEMP R+ +SWT ++NG ++ E AL+ F M + G+ P+ VT + ++A +N
Sbjct: 276 AQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSN 335
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ L G +H+ + K F+ + + ++L+ LY++CG I AR+VF ++ ++SWN +
Sbjct: 336 LAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGM 395
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I +A +G EA+ + MQ+ +KP+ V++ G L+ACSH+GL+++GLR F+ M K
Sbjct: 396 IAAYAHHGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKS 455
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP-NEVVLGSLLAACRTKGDIILAERL 406
++ R EHY C++DL SRAGRL+DA ++ + +KP + V +LL C G+ + +
Sbjct: 456 IAVRDEHYSCLIDLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGCNAHGNESIGDLA 515
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHE 466
+ L++ +P Y LL+N+YA+ GKW A KIR M RG++K+PG S IE+ + +H
Sbjct: 516 ARNLLEAEPDNAGTYTLLSNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIELANKVHV 575
Query: 467 FMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
F+A D+SH ESE IYS+L+ + +++ G P
Sbjct: 576 FVARDKSHSESELIYSLLQDIHHMMRMDGSDP 607
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/503 (24%), Positives = 223/503 (44%), Gaps = 84/503 (16%)
Query: 6 TATILPQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPT-----VQWTSSISRHCRSGR 60
A + H Q+PN+ + + +++ + T V WT+ ++ + R G+
Sbjct: 27 AAAVFSTDAFSHVQDPNRRIAELAAAG-RVPDARRLFDRTPDRDVVSWTAMVAAYARQGQ 85
Query: 61 IAEAALEFTRMTLHGTNPNHITFITLLSGCADF----PSQCLFLGAMIHGLVCKLGLDR- 115
+ EA+ R N +T+ LLSG A ++ LF DR
Sbjct: 86 LHEASALLHR---PDARRNVVTWTALLSGYARARRVDEARALF--------------DRM 128
Query: 116 --NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
NV+ +L+ YA GRM A +FD M V+ + +WN ++ +R G ++ A R+F+
Sbjct: 129 PERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAGSWNILLAALVRSGTMDEARRLFE 188
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI 233
MP R+ +SWT +++G + G +EA F M E + V+ ++++ A +
Sbjct: 189 RMPERNVMSWTTMISGLARSGSADEARALFDGMP----ERNVVSWNAMISGYARNLRIDE 244
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV 293
L + + ++D V N +I + + ++ A+++F M KR +VSW +++ G
Sbjct: 245 ALDLFMNMPERD----VASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQ 300
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH-AGLIEDGLRYFDIMKKIYRVSPRI 352
AL+ FN M +G +P+ V+F GA+ A S+ AGL E + I K ++ I
Sbjct: 301 GNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQFDNFI 360
Query: 353 EHYGCIVDLYSRAGRLE-------------------------------DALNVVENMP-- 379
E ++ LY++ G + +A+ + E M
Sbjct: 361 E--SSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIALYEKMQEN 418
Query: 380 -MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGV---DSNYVLLANMYAAVGKWD 435
KPN+V LL+AC G + R+ +Y+ D + D +Y L ++ + G+ D
Sbjct: 419 RYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAK-DKSIAVRDEHYSCLIDLCSRAGRLD 477
Query: 436 GAGKIRRTMKGRGIQKKPGLSSI 458
A ++ G++ KP S++
Sbjct: 478 DAKRLI-----NGLKLKPTSSTV 495
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 15/176 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W I+ + G EA + +M + PN +T++ LLS C+ S + G I
Sbjct: 390 ISWNGMIAAYAHHGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSH--SGLVDEGLRIF 447
Query: 106 GLVCKLGLDRNNVMVG---TALLDMYAKFGRMDLATVVFDAMRVK--SSFTWNAMIDGYM 160
+ K D++ + + L+D+ ++ GR+D A + + +++K SS W+A++ G
Sbjct: 448 EYMAK---DKSIAVRDEHYSCLIDLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGCN 504
Query: 161 RRGDIES----AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
G+ ES A R E +A ++T L N + G ++EA + EM G++
Sbjct: 505 AHGN-ESIGDLAARNLLEAEPDNAGTYTLLSNIYASAGKWKEAAKIRSEMNDRGLK 559
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 251/459 (54%), Gaps = 32/459 (6%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL--GA 102
V W + I+ + G++ A F RM L G P T++ LL A P + + G
Sbjct: 388 AVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGR 447
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H + G + +GTA++ MYA G +D A +SF AM D +
Sbjct: 448 KLHSRIVSCGYA-SEPAIGTAVVKMYASCGAIDEAA---------ASFQRGAMEDRH--- 494
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
D +SW A+++ + G+ + AL FR M + GV P+ +T ++VL
Sbjct: 495 ----------------DVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVL 538
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTL 281
+ACA L G +H ++ + N+ V L +Y RCG +E AR++F+++ +R +
Sbjct: 539 DACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDV 598
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
V +N++I ++ NG GEAL+ F MQ+EG +PD SF L+ACSH GL ++G F
Sbjct: 599 VIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRS 658
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M++ Y ++P +HY C VD+ RAG L DA ++ M +KP +V +LL ACR D+
Sbjct: 659 MRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVD 718
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
+ +LDPG +S YV+L+N+ A GKWD A ++R M+ RG++K+ G S IEI
Sbjct: 719 RGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIK 778
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
S +HEF+AGDRSH SE IY LE L +++ GYVP+T
Sbjct: 779 SRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDT 817
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 171/373 (45%), Gaps = 58/373 (15%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
++ V W + + + + G ++EAAL F RM G +P+ +T + +GC+ L
Sbjct: 285 RAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSS-----L 339
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G MIHG + GLDR ++++G ALLDMY + G + A +F + ++ +WN MI G
Sbjct: 340 RFGRMIHGCALEKGLDR-DIVLGNALLDMYTRCGSPEEARHLFKRIPC-NAVSWNTMIAG 397
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
++G ++ AV E F+ MQ+ G+ P T
Sbjct: 398 SSQKGQMKRAV-------------------------------ELFQRMQLEGMAPVRATY 426
Query: 219 ISVLNACAN----VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
+++L A A+ + G +H ++ + + ++ +Y+ CG I+ A FQ
Sbjct: 427 LNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQ 486
Query: 275 R--MHKR-TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG- 330
R M R +VSWN+II + +G AL +F M G P+ ++ L AC+ A
Sbjct: 487 RGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAA 546
Query: 331 -----LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
++ D LR+ + ++ + + +Y R G LE A + E + ++ + V
Sbjct: 547 LTEGEIVHDHLRHSGMESNLFVATA-------LASMYGRCGSLESAREIFEKVAVERDVV 599
Query: 386 VLGSLLAACRTKG 398
+ +++AA G
Sbjct: 600 IFNAMIAAYSQNG 612
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 120/253 (47%), Gaps = 39/253 (15%)
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
T P H+ + LL D + L G IH + LGL+ +G LL +Y K +
Sbjct: 26 ATRPAHL--VRLLRAAGD--DRLLSQGRRIHARIVSLGLEEE---LGNHLLRLYLKCESL 78
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
GD+E +F + VRD SWT ++ + + G
Sbjct: 79 ----------------------------GDVEE---VFSRLEVRDEASWTTIITAYTEHG 107
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
+ A+ F MQ GV D VT ++VL ACA +G L G IH ++++ K + N
Sbjct: 108 QAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLAN 167
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKP 314
L+ +Y CGC+ A +F++M +R LVSWN+ I A +G +G ALE F MQ EG +P
Sbjct: 168 LLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRP 226
Query: 315 DGVSFTGALTACS 327
++ ALT C+
Sbjct: 227 ARITLVIALTVCA 239
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 183/440 (41%), Gaps = 90/440 (20%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W ++I+ + +SG + A F RM L G P IT + L+ CA IH
Sbjct: 194 VSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQ-----AQAIH 248
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+V + GL++ ++V TAL YA+ G + A V
Sbjct: 249 FIVRESGLEQT-LVVSTALASAYARLGHLYQAKEV------------------------- 282
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
FD RD +SW A+L + + G+ EA F M G+ P VT+++ C
Sbjct: 283 ------FDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGC 336
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ +L G IH L++ ++ + N L+D+Y+RCG E AR +F+R+ VSWN
Sbjct: 337 S---SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRI-PCNAVSWN 392
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS----HAGLIEDGLR-YFD 340
++I G + G + A+E F MQ EG P ++ L A + A + +G + +
Sbjct: 393 TMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSR 452
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK------------------- 381
I+ Y P I +V +Y+ G +++A + M+
Sbjct: 453 IVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHG 510
Query: 382 ------------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
PN++ ++L AC + E + +L G++SN +
Sbjct: 511 HGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHL--RHSGMESNLFV 568
Query: 424 ---LANMYAAVGKWDGAGKI 440
LA+MY G + A +I
Sbjct: 569 ATALASMYGRCGSLESAREI 588
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 162/381 (42%), Gaps = 60/381 (15%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
S+ V WT+ I+ + G+ A F RM G + +TF+ +L CA
Sbjct: 86 SRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGD-- 143
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L G IH + + GL +V+ LL +Y G + A ++F+ M + +WNA I
Sbjct: 144 LSQGRSIHAWIVESGLKGKSVLANL-LLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIA 201
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
+ GD+ G ALE F+ MQ+ GV P +T
Sbjct: 202 ANAQSGDL-----------------------GI--------ALELFQRMQLEGVRPARIT 230
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++ L CA T+ IH V + + + V L Y+R G + A++VF R
Sbjct: 231 LVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAA 287
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS--------HA 329
+R +VSWN+++ +A +G + EA F M EG P V+ A T CS H
Sbjct: 288 ERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLRFGRMIHG 347
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
+E GL ++ ++D+Y+R G E+A ++ + +P N V +
Sbjct: 348 CALEKGLDRDIVLGN------------ALLDMYTRCGSPEEARHLFKRIPC--NAVSWNT 393
Query: 390 LLAACRTKGDIILAERLMKYL 410
++A KG + A L + +
Sbjct: 394 MIAGSSQKGQMKRAVELFQRM 414
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 27/204 (13%)
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++ +L A + L G IH ++ ++ + N L+ LY +C + +VF R+
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLE 89
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS---------- 327
R SW +II + +G A+ F+ MQ+EG + D V+F L AC+
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149
Query: 328 -HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVV 386
HA ++E GL+ ++ + ++ +Y G + A+ + E M+ + V
Sbjct: 150 IHAWIVESGLKGKSVLANL------------LLHIYGSCGCVASAMLLFEK--MERDLVS 195
Query: 387 LGSLLAACRTKGDIILAERLMKYL 410
+ +AA GD+ +A L + +
Sbjct: 196 WNAAIAANAQSGDLGIALELFQRM 219
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 164/454 (36%), Positives = 250/454 (55%), Gaps = 51/454 (11%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T W + I + S EA L + M H N TF LL C+ + L I
Sbjct: 83 TFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSA--LEETQQI 140
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K+G FG +T N++++ Y + GD
Sbjct: 141 HAHIIKMG------------------FG--------------SEIYTTNSLLNVYSKSGD 168
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+SA +FD++ RD EAL F MQ +G++ D V ++S L A
Sbjct: 169 IKSARLLFDQVDQRDT-----------------EALNLFHRMQTAGIKLDNVALVSTLQA 211
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L G WIH Y+ K + + + + LID+Y++CG +E A +VF++M ++ + W
Sbjct: 212 CADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVW 271
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G+A++G EALE+F MQ G +P+ ++FTG LTACSHAGL+ + F+ M++
Sbjct: 272 TAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMER 331
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
I+ P IEHYGC+VDL RAG L++A ++ENMP+KPN + G+LL AC G++ L +
Sbjct: 332 IHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGK 391
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++ K L+ +DPG Y+ LA+++AA G+W+ A ++RR MK +G+ K PG S I +
Sbjct: 392 QIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTA 451
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
HEF+AGD SH + + I MLE + L+ GY P
Sbjct: 452 HEFLAGDESHPQIKEIDHMLEQIVERLREEGYKP 485
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G + A +FD + + W ++ G+ EEAL + M V + T +L
Sbjct: 66 GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC+++ L IH +++K F + N+L+++YS+ G I+ AR +F ++ +R
Sbjct: 126 KACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT- 184
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
EAL F+ MQ G K D V+ L AC+ G+++ G +
Sbjct: 185 ----------------EALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYI 228
Query: 343 KKI-YRVSPRIEHYGCI-VDLYSRAGRLEDALNVVENMPMK 381
KK + P + GC+ +D+Y++ G LE+A+ V M K
Sbjct: 229 KKHEIEIDPIL---GCVLIDMYAKCGDLEEAIEVFRKMEEK 266
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 158/463 (34%), Positives = 259/463 (55%), Gaps = 7/463 (1%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V WTS S + G F M +G PN +T ++L C++ L G
Sbjct: 195 VKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKD--LKSG 252
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHG + G+ N V V +AL+ +YA+ + A +VFD M + +WN ++ Y
Sbjct: 253 RAIHGFAVRHGMIEN-VFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFT 311
Query: 162 RGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
+ + + +F +M + D +W A++ G ++ G E+A+E R+MQ G +P+ +T
Sbjct: 312 NREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQIT 371
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I S L AC+ + +L +G +H YV + ++ L+ +Y++CG + +R VF +
Sbjct: 372 ISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMIC 431
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
++ +V+WN++I+ A++G E L F SM + G KP+ V+FTG L+ CSH+ L+E+GL+
Sbjct: 432 RKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQ 491
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
F+ M + + V P HY C+VD++SRAGRL +A ++ MPM+P G+LL ACR
Sbjct: 492 IFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVY 551
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
++ LA+ L +++P NYV L N+ W A + R MK RGI K PG S
Sbjct: 552 KNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSW 611
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+++G +H F+ GD++++ES+ IY+ L+ L +K GY P+T
Sbjct: 612 LQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDT 654
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 36/256 (14%)
Query: 142 DAMR---VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE 198
DA+R + +F NA+I Y + +E A R+FD++ V+D +SWT++ + +V G
Sbjct: 157 DAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRL 216
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
L F EM +GV+P+ VT+ S+L AC+ + L G IH + ++ +NV VC+ L+
Sbjct: 217 GLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVS 276
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
LY+RC ++ AR VF M R +VSWN ++ + N + L F+ M +G + D +
Sbjct: 277 LYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEAT 336
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+ + C G E + + L ++N+
Sbjct: 337 WNAVIGGCMENGQTEKAV---------------------------------EMLRKMQNL 363
Query: 379 PMKPNEVVLGSLLAAC 394
KPN++ + S L AC
Sbjct: 364 GFKPNQITISSFLPAC 379
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 13/233 (5%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
++ + GD A ++FD +P D + + L++ F RG EA+ + ++ G++P
Sbjct: 72 LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
++V AC G +H ++ + + N LI Y +C C+E AR+VF
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFD 191
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
+ + +VSW S+ + G L F M G KP+ V+ + L ACS ++
Sbjct: 192 DLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKS 251
Query: 335 GLRYFDIMKKIYRVSPR---IEH-YGC--IVDLYSRAGRLEDALNVVENMPMK 381
G + I+ + R IE+ + C +V LY+R ++ A V + MP +
Sbjct: 252 G-------RAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHR 297
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 40/256 (15%)
Query: 37 NSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQ 96
+SK W + I +G+ +A +M G PN IT + L C+ S
Sbjct: 326 SSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILES- 384
Query: 97 CLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMI 156
L +G +H V + L ++ TAL+ MYAK G ++L+ VFD + K WN MI
Sbjct: 385 -LRMGKEVHCYVFRHWL-IGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMI 442
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
G NG E L F M SG++P+ V
Sbjct: 443 IANAMHG------------------------NG-------REVLLLFESMLQSGIKPNSV 471
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKD---NVKVCNTLIDLYSRCGCIEFARQVF 273
T VL+ C++ + GL I + + + N C ++D++SR G + A +
Sbjct: 472 TFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYAC--MVDVFSRAGRLHEAYEFI 529
Query: 274 QRM-HKRTLVSWNSII 288
QRM + T +W +++
Sbjct: 530 QRMPMEPTASAWGALL 545
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 171/454 (37%), Positives = 251/454 (55%), Gaps = 35/454 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WTS I+ + ++ EA M PN TF +LL + G IH
Sbjct: 118 VSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGT--GRQIH 175
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L K G +V VG+ALLDMYA+ G+MD+AT VFD + K+ +WNA+I G+ R+GD
Sbjct: 176 ALAVKCGW-HEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDG 234
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
ESA+ F EM L NGF E + T SV ++
Sbjct: 235 ESALMTFAEM----------LRNGF---------------------EATHFTYSSVFSSI 263
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A +G L G W+H +V+K K V NTL+D+Y++ G + AR+VF R+ + LV+WN
Sbjct: 264 ARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWN 323
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S++ FA G EA+ +F M+K G + ++F LTACSH GL+++G RYF++MK+
Sbjct: 324 SMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKE- 382
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P I+HY +V L RAG L AL + MPM+P V G+LLAACR + + +
Sbjct: 383 YDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQF 442
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
++ +LDP VLL N+YA+ G+WD A ++R MK G++K+P S +E+ + +H
Sbjct: 443 AADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVH 502
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
F+A D +H ++E IY M +S ++ GYVP+
Sbjct: 503 MFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPD 536
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 128/246 (52%), Gaps = 4/246 (1%)
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI 208
+F N++I Y + + A +FD+M +D +SWT+L+ G+ + EA+ M
Sbjct: 86 AFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLK 145
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
+P+ T S+L A G G IH +K + ++V V + L+D+Y+RCG ++
Sbjct: 146 GRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDM 205
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
A VF ++ + VSWN++I GFA G AL F M + GF+ +++ ++ +
Sbjct: 206 ATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIAR 265
Query: 329 AGLIEDG-LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
G +E G + ++K +++ + + ++D+Y+++G + DA V + + K + V
Sbjct: 266 LGALEQGKWVHAHVIKSRQKLTAFVGN--TLLDMYAKSGSMIDARKVFDRVDNK-DLVTW 322
Query: 388 GSLLAA 393
S+L A
Sbjct: 323 NSMLTA 328
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 129/268 (48%), Gaps = 10/268 (3%)
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
S + ACA L IH ++ F + + N+LI +Y +C + AR VF +M ++
Sbjct: 56 SFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRK 115
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+VSW S+I G+A N EA+ M K FKP+G +F L A AG D
Sbjct: 116 DMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKA---AGAYADSGTGR 172
Query: 340 DIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
I + + Y ++D+Y+R G+++ A V + + K N V +L++ K
Sbjct: 173 QIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK-NGVSWNALISGFARK 231
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
GD A LM + L G ++ + +++++++ + GA + + + I+ + L++
Sbjct: 232 GDGESA--LMTFAEMLRNGFEATHFTYSSVFSSIARL-GALEQGKWVHAHVIKSRQKLTA 288
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLE 485
+G+ + + A S I++ ++ ++
Sbjct: 289 F-VGNTLLDMYAKSGSMIDARKVFDRVD 315
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 162/463 (34%), Positives = 265/463 (57%), Gaps = 11/463 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S IS + + G A F++M +P+ T ++LS CA+ C+ G I
Sbjct: 244 VTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCI--GEQI 301
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK----SSFTWNAMIDGYM 160
H + G D + +++ AL+ MY++ G ++ A + + K FT A++DGY+
Sbjct: 302 HSHIVTTGFDISGIVL-NALISMYSRCGGVETARRLIEQRGTKDLKIEGFT--ALLDGYI 358
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ GD+ A +FD + RD ++WTA++ G+ + G + EA+ FR M P+ T+ +
Sbjct: 359 KLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAA 418
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KR 279
+L+ +++ +LG G IH +K +V V N LI +Y++ G I A + F + +R
Sbjct: 419 MLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCER 478
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
VSW S+I+ A +G EALE F +M EG +PD +++ G +AC+HAGL+ G +YF
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 538
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
D+MK + ++ P + HY C+VDL+ RAG L++A +E MP++P+ V GSLL+ACR +
Sbjct: 539 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKN 598
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
I L + + L+ L+P Y LAN+Y+A GKW+ A KIR++MK ++K+ G S IE
Sbjct: 599 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 658
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
+ +H F D H + IY ++ + ++K GYVP+T +
Sbjct: 659 VKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTAS 701
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 212/463 (45%), Gaps = 75/463 (16%)
Query: 78 PNHITFITLLSGCADFPSQCL------FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF 131
P ++ TLL C + + + F ++H V K GL +V + L+++Y+K
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGL-VFSVYLMNNLMNVYSKT 62
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
G A +FD M ++++F+WN ++ Y +RGD++S+ FD +P RD++SWT ++ G+
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYK 122
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
G + +A+ EM G+EP T+ +VL + A L G +H +++K + NV
Sbjct: 123 NIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVS 182
Query: 252 VCNTLIDLYSRCGCIEFARQVFQR-------------------------------MHKRT 280
V N+L+++Y++CG A+ VF R M +R
Sbjct: 183 VSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACS-----------H 328
+V+WNS+I G+ G+ AL+ F+ M ++ PD + L+AC+ H
Sbjct: 243 IVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIH 302
Query: 329 AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVV-L 387
+ ++ G FDI + ++ +YSR G +E A ++E K ++
Sbjct: 303 SHIVTTG---FDISGIV---------LNALISMYSRCGGVETARRLIEQRGTKDLKIEGF 350
Query: 388 GSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447
+LL GD+ A+ + L D D + + Y G + A + R+M G
Sbjct: 351 TALLDGYIKLGDMNEAKNIFDSLKDRDVVA---WTAMIVGYEQHGLYGEAINLFRSMVGE 407
Query: 448 GIQKKPG----LSSIEIGSGIHEFMAGDRSH---IESEHIYSM 483
+++P + + + S + G + H ++S IYS+
Sbjct: 408 --EQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSV 448
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 107/291 (36%), Gaps = 86/291 (29%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV WTS I + G EA F M + G P+HIT++ + S C
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH------------ 527
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
GLV + G DM ++ + + + M+D + R G
Sbjct: 528 AGLVNQ----------GRQYFDMMKDVDKI-----------IPTLSHYACMVDLFGRAGL 566
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ A ++MP+ EPD VT S+L+A
Sbjct: 567 LQEAQEFIEKMPI----------------------------------EPDVVTWGSLLSA 592
Query: 225 CANVGTLGIG-LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ-----RMHK 278
C + +G + R +L + +N + L +LYS CG E A ++ + R+ K
Sbjct: 593 CRVYKNIDLGKVAAERLLLLE--PENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKK 650
Query: 279 RTLVSWNSI---IVGFAV-NGFVGEALEYFNSM-------QKEGFKPDGVS 318
SW + + F V +G + E + +M +K G+ PD S
Sbjct: 651 EQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTAS 701
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 156/455 (34%), Positives = 253/455 (55%), Gaps = 4/455 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + IS + G EA RM G + T+ +++ CA + L LG +H
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACA--TAGLLQLGKQVH 309
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V L + + +L+ +Y K G+ D A +F+ M K +WNA++ GY+ G I
Sbjct: 310 AYV--LRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHI 367
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +F EM ++ +SW +++G + G+ EE L+ F M+ G EP + +C
Sbjct: 368 GEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC 427
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A +G G H +LK F ++ N LI +Y++CG +E ARQVF+ M VSWN
Sbjct: 428 AVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWN 487
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I +G EA++ + M K+G +PD ++ LTACSHAGL++ G +YFD M+ +
Sbjct: 488 ALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETV 547
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
YR+ P +HY ++DL R+G+ DA +V+E++P KP + +LL+ CR G++ L
Sbjct: 548 YRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGII 607
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
L L P D Y+LL+NM+AA G+W+ ++R+ M+ RG++K+ S IE+ + +H
Sbjct: 608 AADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVH 667
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F+ D SH E+E +Y L+ L +++ GYVP+T
Sbjct: 668 TFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDT 702
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/509 (26%), Positives = 230/509 (45%), Gaps = 103/509 (20%)
Query: 68 FTRMTLHGTNPNHITFITLLSG---CADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTAL 124
F +M G P++ TF ++L+G AD QC+ H K G V AL
Sbjct: 136 FCKMKHEGFKPDNFTFASVLAGLALVADDEKQCV----QFHAAALKSGAGYITS-VSNAL 190
Query: 125 LDMYAKFGR----MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR-D 179
+ +Y+K + A VFD + K +W M+ GY++ G + + + M
Sbjct: 191 VSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMK 250
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHR 239
+++ A+++G+V RG+++EALE R M SG+E D T SV+ ACA G L +G +H
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 240 YVL-KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
YVL ++DF + N+L+ LY +CG + AR +F++M + LVSWN+++ G+ +G +G
Sbjct: 311 YVLRREDFSFHFD--NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 299 EA-------------------------------LEYFNSMQKEGFKPDGVSFTGALTACS 327
EA L+ F+ M++EGF+P +F+GA+ +C+
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 328 HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP-------- 379
G +G +Y + KI + ++ +Y++ G +E+A V MP
Sbjct: 429 VLGAYCNGQQYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWN 487
Query: 380 --------------------------MKPNEVVLGSLLAACRTKGDIILAERL---MKYL 410
++P+ + L ++L AC G + + M+ +
Sbjct: 488 ALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETV 547
Query: 411 VDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAG 470
+ PG D +Y L ++ GK+ A + I+ P + EI + ++G
Sbjct: 548 YRIPPGAD-HYARLIDLLCRSGKFSDAESV--------IESLPFKPTAEIWEAL---LSG 595
Query: 471 DRSHIESEHIYSMLELLSFDLKLCGYVPE 499
R H E L +++ D KL G +PE
Sbjct: 596 CRVHGNME-----LGIIAAD-KLFGLIPE 618
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 153/364 (42%), Gaps = 55/364 (15%)
Query: 90 CADFPSQCLFLGAMIHGLVCKLGLD-RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS 148
C L L +HG + G R +++ L+D+Y K ++ A +FD +
Sbjct: 22 CLPLRRTSLQLARAVHGNIITFGFQPRAHIL--NRLIDVYCKSSELNYARQLFDEISEPD 79
Query: 149 SFTWNAMIDGYMRRGDIESAVRMFDEMPV--RDAISWTALLNGFVKRGYFEEALECFREM 206
M+ GY GDI A +F++ PV RD + + A++ GF A+ F +M
Sbjct: 80 KIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKM 139
Query: 207 QISGVEPDYVTIISVLNACANVG-TLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
+ G +PD T SVL A V + H LK V N L+ +YS+C
Sbjct: 140 KHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCAS 199
Query: 266 ----IEFARQVFQRMHKR--------------------------------TLVSWNSIIV 289
+ AR+VF + ++ LV++N++I
Sbjct: 200 SPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMIS 259
Query: 290 GFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVS 349
G+ GF EALE M G + D ++ + AC+ AGL++ G K+++
Sbjct: 260 GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG-------KQVHAYV 312
Query: 350 PRIEHYG-----CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
R E + +V LY + G+ ++A + E MP K + V +LL+ + G I A+
Sbjct: 313 LRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAK 371
Query: 405 RLMK 408
+ K
Sbjct: 372 LIFK 375
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 264/466 (56%), Gaps = 5/466 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT IS + G E+ F +M + TL+SGC CL G +H
Sbjct: 337 VAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCL--GRQLH 394
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L K G V+V +L+ MYAK + A +F M K +W +MI Y + G++
Sbjct: 395 SLCLKSG-QIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNV 453
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNA 224
A FD M ++ I+W A+L +++ G E+ L ++ M V PD+VT +++
Sbjct: 454 AKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKG 513
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G +G I +K + V N +I +YS+CG I AR+VF ++ + +VSW
Sbjct: 514 CADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSW 573
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G++ +G +A+E F+ + K G KPD +S+ L+ CSH+GL+++G YFD+MK+
Sbjct: 574 NAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKR 633
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ +SP +EH+ C+VDL RAG L +A +++++MPMKP V G+LL+AC+ G+ LAE
Sbjct: 634 AHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAE 693
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
K++ +LD +Y+L+A +YA GK D + +IR+ M+ +GI+K PG S +E+ + +
Sbjct: 694 LAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKV 753
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV-PETVAGELYEND 509
H F A D SH + I L+ L + GYV ++ E++ ++
Sbjct: 754 HVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIHHSE 799
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 141/280 (50%), Gaps = 4/280 (1%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPSQCLFLGAMIHG 106
W + +S + +S + + F M G + PN T + C L L +
Sbjct: 105 WNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLL--A 162
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
+V K +++ V AL+DM+ + G +DLA+ +F ++ + F N+M+ GY++ ++
Sbjct: 163 MVQKFD-SQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVD 221
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A+ +FD MP RD +SW +++ + G EAL+ +MQ GV D T S L ACA
Sbjct: 222 HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 281
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ +L G +H V++ + V + L++LY++ GC + A+ VF +H R V+W
Sbjct: 282 RLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTV 341
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
+I GF G E++E FN M+ E D + ++ C
Sbjct: 342 LISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC 381
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 149/314 (47%), Gaps = 39/314 (12%)
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRM-DLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
HG + +GL + V + LL Y G + D ++ + + T N M++GY + G
Sbjct: 27 HGRLVAVGL-ASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLG 85
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE-PDYVTIISVL 222
+ AV +F MP RD SW L++G+ + + +LE F M SG P+ T+ +
Sbjct: 86 RLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAM 145
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR------- 275
+C +G + L + V K D +D+ +V L+D++ RCG ++ A ++F R
Sbjct: 146 KSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMF 205
Query: 276 ------------------------MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
M +R +VSWN ++ + +G V EAL+ MQ +G
Sbjct: 206 CRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG 265
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLE 369
+ D ++T +LTAC+ + G + + ++ R P I+ Y +V+LY+++G +
Sbjct: 266 VRLDSTTYTSSLTACARLSSLRWGKQ---LHAQVIRNLPHIDPYVASALVELYAKSGCFK 322
Query: 370 DALNVVENMPMKPN 383
+A V ++ + N
Sbjct: 323 EAKGVFNSLHDRNN 336
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 144/306 (47%), Gaps = 38/306 (12%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W +S +SGR+ EA M G + T+ + L+ CA S L G +
Sbjct: 235 VVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS--LRWGKQL 292
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V + L + V +AL+++YAK G A VF N++ D
Sbjct: 293 HAQVIR-NLPHIDPYVASALVELYAKSGCFKEAKGVF-----------NSLHD------- 333
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
R+ ++WT L++GF++ G F E++E F +M+ + D + ++++
Sbjct: 334 -------------RNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 380
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C + L +G +H LK V V N+LI +Y++C ++ A +F+ M+++ +VSW
Sbjct: 381 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSW 440
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
S+I ++ G V +A E+F+ M ++ +++ L A G EDGLR + +M
Sbjct: 441 TSMITAYSQVGNVAKAREFFDGMSEKNV----ITWNAMLGAYIQHGAEEDGLRMYKVMLS 496
Query: 345 IYRVSP 350
V P
Sbjct: 497 EEYVRP 502
>gi|413943789|gb|AFW76438.1| hypothetical protein ZEAMMB73_890738 [Zea mays]
Length = 529
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 154/418 (36%), Positives = 243/418 (58%), Gaps = 8/418 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + + R GR A +M G P+ +T +T ++ C+ L LG IH
Sbjct: 113 VLWNMMMRCYIRCGRFTAAVALAVQMESGGATPDRVTLVTAVTACSRAGD--LNLGRRIH 170
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ G+ ++ V ALLDMY K G ++ A +F+ M ++ +W ++ GY G +
Sbjct: 171 SYM--DGVFGFSLPVANALLDMYTKNGYLEEAVKMFEQMPERNIISWTILVSGYGIAGQL 228
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A F + +D I WT+++N V+ G FEEAL FR+MQ+ VEPD T++++L C
Sbjct: 229 DKARVFFYQCTQKDLILWTSMINACVQHGSFEEALILFRDMQLQRVEPDKFTVVTLLTCC 288
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN+G L G WIH+Y ++ K + + LI++YS+CG ++ + Q+F RM + +W
Sbjct: 289 ANIGALDQGEWIHQYAESRNMKIDAVLGTALIEMYSKCGHVDKSLQIFGRMQGKDAAAWT 348
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+II G A NG +ALE F MQ+ KPDG++F G L+AC H GL+++G RYF MK++
Sbjct: 349 AIICGLATNGQASKALELFEEMQRSKTKPDGITFIGVLSACCHGGLVDEGQRYFQAMKEV 408
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL-GSLLAACRTKGDIILAE 404
Y + PRIEHY C+V+L AG L +A ++ +MP+ + + L G+LL AC+ G++ ++E
Sbjct: 409 YHIEPRIEHYSCLVNLLGHAGLLYEAEKLITDMPVNNDTMPLFGALLTACKANGNVEMSE 468
Query: 405 RLMKYLV--DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L K + D P D N VL++N+YA +W+ A ++R M ++K G S IE+
Sbjct: 469 WLTKRIAKEDCSPNPDVN-VLMSNVYATASRWEEAIRVRSKMTNPAVKKTAGCSMIEV 525
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 147/311 (47%), Gaps = 44/311 (14%)
Query: 143 AMRVKSSFTWNA-----MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
A VK+ F W+A +++ Y G +SA R+FDEMP R + W ++ +++ G F
Sbjct: 70 AAAVKTGFRWDAYTACSLMEMYTMLGRADSARRVFDEMPQRFLVLWNMMMRCYIRCGRFT 129
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
A+ +M+ G PD VT+++ + AC+ G L +G IH Y + F ++ V N L+
Sbjct: 130 AAVALAVQMESGGATPDRVTLVTAVTACSRAGDLNLGRRIHSY-MDGVFGFSLPVANALL 188
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
D+Y++ G +E A ++F++M +R ++SW ++ G+ + G + +A +F ++ D +
Sbjct: 189 DMYTKNGYLEEAVKMFEQMPERNIISWTILVSGYGIAGQLDKARVFFYQCTQK----DLI 244
Query: 318 SFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
+T + AC G E+ L F M ++ RV P D VV
Sbjct: 245 LWTSMINACVQHGSFEEALILFRDM-QLQRVEP-------------------DKFTVV-- 282
Query: 378 MPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-VLLANMYAAVGKWDG 436
+LL C G + E + +Y + +D+ L MY+ G D
Sbjct: 283 -----------TLLTCCANIGALDQGEWIHQYAESRNMKIDAVLGTALIEMYSKCGHVDK 331
Query: 437 AGKIRRTMKGR 447
+ +I M+G+
Sbjct: 332 SLQIFGRMQGK 342
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI- 233
MP+RD L+ +RG F + + +++ G+ D T VL A +GT+ +
Sbjct: 9 MPLRDC---NVLIRTLARRGSFSRVMAVYYDLRARGLAADSYTYPFVLRA---IGTMKLS 62
Query: 234 --GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
G +H +K F+ + +L+++Y+ G + AR+VF M +R LV WN ++ +
Sbjct: 63 VEGRKVHAAAVKTGFRWDAYTACSLMEMYTMLGRADSARRVFDEMPQRFLVLWNMMMRCY 122
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR 351
G A+ M+ G PD V+ A+TACS AG + G R M ++ S
Sbjct: 123 IRCGRFTAAVALAVQMESGGATPDRVTLVTAVTACSRAGDLNLGRRIHSYMDGVFGFSLP 182
Query: 352 IEHYGCIVDLYSRAGRLEDALNVVENMP 379
+ + ++D+Y++ G LE+A+ + E MP
Sbjct: 183 VAN--ALLDMYTKNGYLEEAVKMFEQMP 208
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 47/279 (16%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+ T + WTS I+ + G EA + F M L P+ T +TLL+ CA+ + L
Sbjct: 237 QCTQKDLILWTSMINACVQHGSFEEALILFRDMQLQRVEPDKFTVVTLLTCCANIGA--L 294
Query: 99 FLGAMIHGLVCKLGLDRN---NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAM 155
G IH + RN + ++GTAL++MY+K G +D + +F M+ K + W A+
Sbjct: 295 DQGEWIH----QYAESRNMKIDAVLGTALIEMYSKCGHVDKSLQIFGRMQGKDAAAWTAI 350
Query: 156 IDGYMRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREM-QISG 210
I G G A+ +F+EM D I++ +L+ G +E F+ M ++
Sbjct: 351 ICGLATNGQASKALELFEEMQRSKTKPDGITFIGVLSACCHGGLVDEGQRYFQAMKEVYH 410
Query: 211 VEP---DYVTII------------------------------SVLNACANVGTLGIGLWI 237
+EP Y ++ ++L AC G + + W+
Sbjct: 411 IEPRIEHYSCLVNLLGHAGLLYEAEKLITDMPVNNDTMPLFGALLTACKANGNVEMSEWL 470
Query: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+ + K+D N V + ++Y+ E A +V +M
Sbjct: 471 TKRIAKEDCSPNPDVNVLMSNVYATASRWEEAIRVRSKM 509
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 157/435 (36%), Positives = 259/435 (59%), Gaps = 7/435 (1%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
+A + + +M PN +TF LL GC + G IH V K G ++ V V
Sbjct: 109 KALMLYKQMFCKDIVPNCLTFPFLLKGCTQWLDGAT--GQAIHTQVIKFGFLKD-VYVAN 165
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
+L+ +Y G + A VFD M V TWN+M+ G +R G ++ A+ +F +M R+ I+
Sbjct: 166 SLISLYMAGGLLSNARKVFDEMLVTDVVTWNSMVIGCLRNGGLDMAMDLFRKMNGRNIIT 225
Query: 183 WTALLNGFVKRGYFEEALECFREMQISG---VEPDYVTIISVLNACANVGTLGIGLWIHR 239
W +++ G + G +E+LE F EMQI V+PD +TI SVL+ACA +G + G W+H
Sbjct: 226 WNSIITGLAQGGSAKESLELFHEMQILSDDMVKPDKITIASVLSACAQLGAIDHGKWVHG 285
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
Y+ + + +V + L+++Y +CG ++ A ++F+ M ++ +W +I FA++G +
Sbjct: 286 YLRRNGIECDVVIGTALVNMYGKCGDVQKAFEIFEEMPEKDASAWTVMISVFALHGLGWK 345
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
A F M+K G KP+ V+F G L+AC+H+GL+E G FD+MK++Y + P++ HY C+V
Sbjct: 346 AFNCFLEMEKAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYSIEPQVYHYACMV 405
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
D+ SRA +++ ++ +MPMKP+ V G+LL C+ G++ L E+++ +L+DL+P +
Sbjct: 406 DILSRARLFDESEILIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVVHHLIDLEPHNHA 465
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK-PGLSSIEIGSGIHEFMAGDRSHIESE 478
YV ++YA G +D A +IR MK + I+KK PG S IEI + EF AG S + +
Sbjct: 466 FYVNWCDIYAKAGMFDAAKRIRNIMKEKRIEKKIPGCSMIEINGEVQEFSAGGSSELPMK 525
Query: 479 HIYSMLELLSFDLKL 493
+ +L LS ++K+
Sbjct: 526 ELVLVLNGLSNEMKI 540
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 147/393 (37%), Gaps = 109/393 (27%)
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY--MRRGDIESAVRMFDEMPVRDAISWTA 185
++ +G AT VF ++ +N MI Y M GD
Sbjct: 65 FSYYGSFSYATNVFHMIKNPDLRAYNIMIRAYISMESGD--------------------- 103
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
+F +AL +++M + P+ +T +L C G IH V+K
Sbjct: 104 -------DTHFCKALMLYKQMFCKDIVPNCLTFPFLLKGCTQWLDGATGQAIHTQVIKFG 156
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN-------------------- 285
F +V V N+LI LY G + AR+VF M +V+WN
Sbjct: 157 FLKDVYVANSLISLYMAGGLLSNARKVFDEMLVTDVVTWNSMVIGCLRNGGLDMAMDLFR 216
Query: 286 -----------SIIVGFAVNGFVGEALEYFNSMQ---KEGFKPDGVSFTGALTACSHAGL 331
SII G A G E+LE F+ MQ + KPD ++ L+AC+ G
Sbjct: 217 KMNGRNIITWNSIITGLAQGGSAKESLELFHEMQILSDDMVKPDKITIASVLSACAQLGA 276
Query: 332 IEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP------------ 379
I+ G +++ + + +V++Y + G ++ A + E MP
Sbjct: 277 IDHGKWVHGYLRR-NGIECDVVIGTALVNMYGKCGDVQKAFEIFEEMPEKDASAWTVMIS 335
Query: 380 ----------------------MKPNEVVLGSLLAACRTKGDIILAER------LMKYLV 411
+KPN V LL+AC G L E+ +MK +
Sbjct: 336 VFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLSACAHSG---LVEQGRWCFDVMKRVY 392
Query: 412 DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
++P V +Y + ++ + +D + + R+M
Sbjct: 393 SIEPQV-YHYACMVDILSRARLFDESEILIRSM 424
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WT IS G +A F M G PNH+TF+ LLS CA S + G +
Sbjct: 330 WTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLSACAH--SGLVEQGRWCFDV 387
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS-FTWNAMIDGYMRRGDIE 166
+ ++ V ++D+ ++ D + ++ +M +K + W A++ G G++E
Sbjct: 388 MKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKPDVYVWGALLGGCQMHGNVE 447
Query: 167 SAVR----MFDEMPVRDA--ISWTALLNGFVKRGYFEEA 199
+ + D P A ++W + + K G F+ A
Sbjct: 448 LGEKVVHHLIDLEPHNHAFYVNWCDI---YAKAGMFDAA 483
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 260/458 (56%), Gaps = 38/458 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I+ H ++G + F M G P+ T+ ++L CA + Q L G I
Sbjct: 442 AVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGW--QALNCGMEI 499
Query: 105 HGLVCK--LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
H + K LGLD VG AL+DMY+ +
Sbjct: 500 HNRIIKSRLGLDS---FVGIALIDMYS-------------------------------KC 525
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G +E A ++ D + + +SW A+++GF + EEA + F +M GV+PD T ++L
Sbjct: 526 GMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATIL 585
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+ CAN+ T+ +G IH ++K++ + + + +TL+D+YS+CG ++ + +F++ R V
Sbjct: 586 DTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFV 645
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+WN+++ G+A +G EAL+ F MQ E KP+ +F L AC H GL+E GL YF M
Sbjct: 646 TWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSM 705
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
Y + P++EHY C+VD+ R+G++ AL ++E MP + + V+ +LL+ C+ G++ +
Sbjct: 706 LSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEV 765
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
AE+ ++ L+P + YVLL+N+YA G W+ K+R+ M+ G++K+PG S IEI S
Sbjct: 766 AEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKS 825
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F+ GD++H S+ IY L++L+ ++K GY+P+T
Sbjct: 826 EVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDT 863
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 191/433 (44%), Gaps = 72/433 (16%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S IS + +G + F +M GT + TF +L C+ G I
Sbjct: 139 VVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGG--GIQI 196
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HGL K+G D +V+ G+ALLDMYAK ++D
Sbjct: 197 HGLAVKMGFD-CDVVTGSALLDMYAKCKKLD----------------------------- 226
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+++ F MP ++ +SW+A++ G V+ LE F+EMQ +GV T SV +
Sbjct: 227 --CSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRS 284
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA + L +G +H + LK DF +V + +D+Y +C + A+++F + L S+
Sbjct: 285 CAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSY 344
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI-MK 343
N+IIVG+A + EAL F +QK G D VS +GA AC+ +GL+ + MK
Sbjct: 345 NAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMK 404
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM------------------------- 378
+ + + + + I+D+Y + G L +A V E M
Sbjct: 405 SLCQSNICVAN--AILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTL 462
Query: 379 ---------PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-VLLANMY 428
M+P+E GS+L AC + + ++ G+DS + L +MY
Sbjct: 463 SLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMY 522
Query: 429 AAVGKWDGAGKIR 441
+ G + A K+
Sbjct: 523 SKCGMMEKAEKLH 535
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 150/314 (47%), Gaps = 16/314 (5%)
Query: 72 TLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF 131
+ T TF + C+D + C G H + L + V V L+ MY K
Sbjct: 34 SYQATPTKKKTFSHIFQECSDRKALCP--GKQAHARMI-LTEFKPTVFVTNCLIQMYIKC 90
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFV 191
++ A VFD M + + +WNAM+ GY RGDI A ++FD MP RD +SW +L++G++
Sbjct: 91 SDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYL 150
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
G + ++ F +M G D T VL +C+++ G G+ IH +K F +V
Sbjct: 151 HNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVV 210
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
+ L+D+Y++C ++ + Q F M ++ VSW++II G N + LE F MQK G
Sbjct: 211 TGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAG 270
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV------DLYSRA 365
+F +C+ GL + +++ + + + +V D+Y +
Sbjct: 271 VGVSQSTFASVFRSCA-------GLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKC 323
Query: 366 GRLEDALNVVENMP 379
L DA + ++P
Sbjct: 324 NNLSDAQKLFNSLP 337
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 155/333 (46%), Gaps = 37/333 (11%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
+ + I + RS + EA F + G + ++ CA G +HGL
Sbjct: 344 YNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGD--LEGLQVHGL 401
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
K L ++N+ V A+LDMY K G +
Sbjct: 402 SMK-SLCQSNICVANAILDMYGKC-------------------------------GALVE 429
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +F+EM RDA+SW A++ + G E+ L F M SG+EPD T SVL ACA
Sbjct: 430 ACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAG 489
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
L G+ IH ++K + V LID+YS+CG +E A ++ R+ ++T+VSWN+I
Sbjct: 490 WQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAI 549
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIY 346
I GF++ EA + F+ M + G PD ++ L C++ +E G + + I+KK
Sbjct: 550 ISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKEL 609
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
+ I +VD+YS+ G ++D + E P
Sbjct: 610 QSDAYIS--STLVDMYSKCGNMQDFQLIFEKAP 640
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 157/462 (33%), Positives = 253/462 (54%), Gaps = 34/462 (7%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+ T V W S I + ++G A F +M ++T + L CAD +
Sbjct: 336 RMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGD--V 393
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G +H L+ +L L ++V V +L+ MY+K R+D+A
Sbjct: 394 EQGRFVHKLLDQLELG-SDVSVMNSLISMYSKCKRVDIAA-------------------- 432
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+F+ + + +SW A++ G+ + G EA++ F +MQ+ ++PD T+
Sbjct: 433 -----------EIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTM 481
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+SV+ A A + L WIH V++ NV V L+D+Y++CG + AR++F M +
Sbjct: 482 VSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDE 541
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R + +WN++I G+ +G ALE F M+KE KP+ V+F L+ACSH+GL+E+G +Y
Sbjct: 542 RHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQY 601
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F MKK Y + P ++HYG +VDL RA RL +A + ++ MP++P V G++L ACR
Sbjct: 602 FGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHK 661
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ L E+ + DLDP +VLLAN+YA WD ++R TM+ +GIQK PG S +
Sbjct: 662 NVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVV 721
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
E+ + +H F +G SH +++ IY+ LE L +K GY+P+T
Sbjct: 722 ELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDT 763
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 43/340 (12%)
Query: 55 HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLD 114
+ R+ + +A F RM G P F LL C D + L G IH C+L ++
Sbjct: 150 YARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGD--NADLRKGKEIH---CQLIVN 204
Query: 115 --RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
+NV T +++MYAK R+ +E A +MF
Sbjct: 205 GFASNVFAMTGVVNMYAK-CRL------------------------------VEEAYKMF 233
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
D MP RD + W +++G+ + G+ + ALE MQ G PD +TI+S+L A A+VG+L
Sbjct: 234 DRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLR 293
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
IG IH Y ++ F+ V V L+D+YS+CG + AR +F RM +T+VSWNS+I G+
Sbjct: 294 IGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYV 353
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
NG G A+E F M E + V+ GAL AC+ G +E G R+ + + +
Sbjct: 354 QNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQG-RFVHKLLDQLELGSDV 412
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLG 388
++ +YS+ R++ A + EN+ K N ++LG
Sbjct: 413 SVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILG 452
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 195/418 (46%), Gaps = 88/418 (21%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFT-RMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + IS + ++G + ALE RM G P+ IT +++L AD S L +G I
Sbjct: 242 VCWNTIISGYAQNG-FGKTALELVLRMQEEGKRPDSITIVSILPAVADVGS--LRIGRSI 298
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + G + + V V TAL+DMY+K G
Sbjct: 299 HGYSMRAGFE-SFVNVSTALVDMYSKCG-------------------------------S 326
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ +A +FD M + +SW ++++G+V+ G A+E F++M VE VT++ L+A
Sbjct: 327 VGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHA 386
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G + G ++H+ + + + +V V N+LI +YS+C ++ A ++F+ + +TLVSW
Sbjct: 387 CADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSW 446
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH---------------- 328
N++I+G+A NG + EA++YF MQ + KPD + + A +
Sbjct: 447 NAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIR 506
Query: 329 -------------------AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
G + + FD+M + + + + ++D Y G +
Sbjct: 507 TCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERH-----VTTWNAMIDGYGTHGLGK 561
Query: 370 DALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYL------VDLDPGVD 418
AL + E M +KPNEV +L+AC G L E +Y L+P +D
Sbjct: 562 AALELFEKMKKEVIKPNEVTFLCVLSACSHSG---LVEEGFQYFGSMKKDYGLEPAMD 616
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 144/318 (45%), Gaps = 28/318 (8%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAIS--WTALLNGFVKRGYFEEALECFREMQISGVE 212
++ + + G + A R+F P+ D I + +L G+ + ++A+ F M+ GV
Sbjct: 115 LVSLFCKFGSLHEAARVFQ--PIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVR 172
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P +L C + L G IH ++ F NV ++++Y++C +E A ++
Sbjct: 173 PVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKM 232
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F RM +R LV WN+II G+A NGF ALE MQ+EG +PD ++ L A + G +
Sbjct: 233 FDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSL 292
Query: 333 EDGLRYFDIMKKIYRVSPR------IEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVV 386
G + I+ S R + +VD+YS+ G + A + + M K V
Sbjct: 293 RIG-------RSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGK-TVVS 344
Query: 387 LGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKG 446
S++ GD A + + ++D V + N+ +G + +G
Sbjct: 345 WNSMIDGYVQNGDPGAAMEIFQKMMD-------EQVEMTNV-TVMGALHACADLGDVEQG 396
Query: 447 RGIQKKPGLSSIEIGSGI 464
R + K L +E+GS +
Sbjct: 397 RFVHKL--LDQLELGSDV 412
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 164/457 (35%), Positives = 257/457 (56%), Gaps = 42/457 (9%)
Query: 45 TVQWTSSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
V WT+ IS + S ++ + AL+ M G PN T+ ++L C P+
Sbjct: 121 VVSWTTMISAY--SNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL-----RQ 173
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H + K GL+ ++V V +AL+D+Y+K+
Sbjct: 174 LHCGIIKTGLE-SDVFVRSALIDVYSKWS------------------------------- 201
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
D+++A+ +FDEMP RD + W +++ GF + EAL F+ M+ +G D T+ SVL
Sbjct: 202 DLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLR 261
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
AC + L +G +H +VLK F ++ + N LID+Y +CG +E A F RM ++ ++S
Sbjct: 262 ACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVIS 319
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W++++ G A NG+ +ALE F SM++ G +P+ ++ G L ACSHAGL+E G YF MK
Sbjct: 320 WSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMK 379
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
K++ V P EHYGC++DL RAGRL++A+ ++ M +P+ V +LL ACR ++ LA
Sbjct: 380 KLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLA 439
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
K +++L+P Y+LL+N+YA +W+ ++R+TM RGI+K PG S IE+
Sbjct: 440 IYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQ 499
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IH F+ GD SH + E I L L + GYVP+T
Sbjct: 500 IHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDT 536
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 157/336 (46%), Gaps = 51/336 (15%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F N +++ Y++ +E A +FDEMP R+ +SWT +++ + + ++AL+C M
Sbjct: 91 FVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNK-LNDKALKCLILMFRE 149
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
GV P+ T SVL AC + L +H ++K + +V V + LID+YS+ ++ A
Sbjct: 150 GVRPNMFTYSSVLRACDGLPNLR---QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNA 206
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
VF M R LV WNSII GFA N EAL F M++ GF D + T L AC+
Sbjct: 207 LGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGL 266
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED------------------- 370
L+E G + + + + + ++D+Y + G LED
Sbjct: 267 ALLELGRQ---VHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTM 323
Query: 371 ------------ALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAE------RLMKY 409
AL + E+M +PN + + +L AC G L E R MK
Sbjct: 324 VAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAG---LVEKGWYYFRSMKK 380
Query: 410 LVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
L +DPG + +Y L ++ G+ D A K+ M+
Sbjct: 381 LFGVDPGRE-HYGCLIDLLGRAGRLDEAVKLIHEME 415
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 25/235 (10%)
Query: 176 PVRDAISWTALLN---GFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
P+R + L+N F + A+ M+ GV D +T ++ C+ G +
Sbjct: 13 PLRYVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQ 72
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
G +H ++ + ++ + V NTL+++Y + +E A +F M +R +VSW ++I ++
Sbjct: 73 EGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS 132
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS--------HAGLIEDGLRYFDIMKK 344
N +AL+ M +EG +P+ +++ L AC H G+I+ GL D+ +
Sbjct: 133 -NKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLES-DVFVR 190
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
++D+YS+ L++AL V + MP + + VV S++ D
Sbjct: 191 -----------SALIDVYSKWSDLDNALGVFDEMPTR-DLVVWNSIIGGFAQNSD 233
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 76/180 (42%), Gaps = 10/180 (5%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC--ADFPS 95
S+ + W++ ++ ++G +A F M G+ PN+IT + +L C A
Sbjct: 310 SRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVE 369
Query: 96 QCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNA 154
+ + + L G+D G L+D+ + GR+D A + M + S TW
Sbjct: 370 KGWYYFRSMKKL---FGVDPGREHYG-CLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRT 425
Query: 155 MIDGYMRRGDIESAV---RMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV 211
++ +++ A+ + E+ DA ++ L N + +E+ E + M G+
Sbjct: 426 LLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGI 485
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 163/430 (37%), Positives = 251/430 (58%), Gaps = 15/430 (3%)
Query: 77 NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
P+H TF +L +Q L L A +H L+ KLG + ALL Y R DL
Sbjct: 98 RPDHFTFPQILPS-----AQPLHLVAQLHALLLKLGF-HAHTQSLNALLAAYLANARPDL 151
Query: 137 ATVVF----DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVK 192
A+ VF A+ V S W M+ G ++ G + A +FD MP R+ +SW A+++G+VK
Sbjct: 152 ASRVFRGGGGALDVVS---WTTMVGGLLKLGLFDDARVLFDGMPERNLVSWNAMMSGYVK 208
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
F +ALE F EM+ GV+ + + + AC G L G +HR+V + + + K+
Sbjct: 209 ACRFLDALEVFDEMRARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSGIQMDEKL 268
Query: 253 CNTLIDLYSRCGCIEFARQVFQRM--HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
++D+Y +CGC+E A +VF+ + + L +WN +I GFAV+G +AL+ F M++E
Sbjct: 269 ATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGQDALKLFGRMERE 328
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
G PD V+ LTAC+HAG++ +G YF+ + + Y + P++EHYGC+VDLY RAGRLE+
Sbjct: 329 GVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGRLEE 388
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
A V+++MPM+P+ VLG+L A + GD+ L E + +++LDP YVLLAN+ A
Sbjct: 389 AKKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLAT 448
Query: 431 VGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFD 490
G+W+ ++RR M R + K+ G S IE+ + EF G H +E +Y+M +
Sbjct: 449 AGRWEDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGLCHPRAEEVYAMASDMMRK 508
Query: 491 LKLCGYVPET 500
++ GYVP+T
Sbjct: 509 IRAEGYVPDT 518
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 176/500 (35%), Positives = 274/500 (54%), Gaps = 47/500 (9%)
Query: 17 HQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT 76
H N + +++ QI Q + T N + W I + +S + A+ + +
Sbjct: 19 HLLNQSNSISHVKQIHAQILRTIHTPN-SFTWNILIQSYSKSTLHKQKAILLYKAIITEQ 77
Query: 77 N----PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFG 132
P+ T+ +L CA S LF G +H V KLG + LD Y
Sbjct: 78 ENELFPDKHTYPFVLKACAYLFS--LFEGKQVHAHVLKLGFE----------LDTY---- 121
Query: 133 RMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM-PVRDAISWTALLNGFV 191
N++I Y G +E+A ++FD M R+ +SW +++ +
Sbjct: 122 ------------------ICNSLIHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYA 163
Query: 192 KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD--- 248
K G ++ L F EM + EPD T+ SV+ AC +G+L +G+W+H +VLK+ K+
Sbjct: 164 KVGDYDIVLIMFCEM-MKVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVC 222
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
+V V L+D+Y +CG +E A+QVF+ M R + SWNSII+GFAV+G AL+YF M
Sbjct: 223 DVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMV 282
Query: 309 K-EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
K E P+ ++F G L+AC+H+G++++GL YF++M K Y V P + HYGC+VDLY+RAG
Sbjct: 283 KVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGH 342
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAAC-RTKGDIILAERLMKYLVDLDPGV-DSNYVLLA 425
+++ALNVV MP+KP+ V+ SLL AC + + L+E + K + + + V YVLL+
Sbjct: 343 IQEALNVVSEMPIKPDAVIWRSLLDACYKQHASVELSEEMAKQIFESNGSVCGGAYVLLS 402
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
+YA+ +W+ G +R+ M +G+ KKPG S IEI HEF AGD +H +S+ IY +
Sbjct: 403 KVYASASRWNDVGLLRKLMNDKGVSKKPGCSLIEINGAAHEFFAGDTNHPQSKDIYKFMN 462
Query: 486 LLSFDLKLCGYVPETVAGEL 505
+ L+ GY+P+ L
Sbjct: 463 EIQEKLESVGYLPDYSGAPL 482
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 165/480 (34%), Positives = 274/480 (57%), Gaps = 12/480 (2%)
Query: 32 SIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA 91
S+Q NS V WT I + +++ F +M + TL+SGC
Sbjct: 330 SLQDRNS-------VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC- 381
Query: 92 DFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT 151
F L LG +H L K G +R ++V +L+ +YAK G + A VF +M + +
Sbjct: 382 -FNRMDLCLGRQLHSLCLKSGHNRA-IVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVS 439
Query: 152 WNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISG 210
W +MI Y + G+I A FD M R+AI+W A+L +++ G E+ L+ + M
Sbjct: 440 WTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKD 499
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
V PD+VT +++ CA++G +G I + +K NV V N I +YS+CG I A+
Sbjct: 500 VTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQ 559
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
++F ++ + +VSWN++I G++ +G +A + F+ M +G KPD +S+ L+ CSH+G
Sbjct: 560 KLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSG 619
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
L+++G YFD+M +++ +SP +EH+ C+VDL RAG L +A ++++ MPMKP V G+L
Sbjct: 620 LVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGAL 679
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
L+AC+ G+ LAE K++ +LD +Y+LLA +Y+ GK D + ++R+ M+ +GI+
Sbjct: 680 LSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIK 739
Query: 451 KKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV-PETVAGELYEND 509
K PG S +E+ + +H F A D SH + I + L+ L + GYV E+ E++ ++
Sbjct: 740 KNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYVRTESPRSEIHHSE 799
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 170/368 (46%), Gaps = 22/368 (5%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPSQCLFLGAMIHG 106
W + +S + ++ R + F M G + PN TF ++ C C L + G
Sbjct: 105 WNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALG--CRELAPQLLG 162
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
L K + V TAL+DM+ + G +D A+ +F + + F N+M+ GY + I+
Sbjct: 163 LFWKFDF-WGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGID 221
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A+ F++M RD +SW ++ + G EAL EM GV D T S L ACA
Sbjct: 222 HAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACA 281
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ +LG G +H V++ + + V + LI+LY++CG + A++VF + R VSW
Sbjct: 282 RLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTV 341
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KK 344
+I G +++E FN M+ E D + ++ C D+ ++
Sbjct: 342 LIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC---------FNRMDLCLGRQ 392
Query: 345 IYRVSPRIEHYGCIV------DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
++ + + H IV LY++ G L++A V +M + + V S++ A G
Sbjct: 393 LHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER-DIVSWTSMITAYSQIG 451
Query: 399 DIILAERL 406
+II A
Sbjct: 452 NIIKAREF 459
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 162/351 (46%), Gaps = 48/351 (13%)
Query: 91 ADFPSQCLFLGAM-----IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDA-M 144
AD C GA+ +HG + +GL + V + LL Y G + A + A +
Sbjct: 8 ADALRSCGSRGALAGARALHGRLVTVGL-ASAVFLQNTLLHAYFSCGALSDARRLLRADI 66
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFR 204
+ + T N M++GY ++G + A +FD MP RD SW L++G+ + F + LE F
Sbjct: 67 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126
Query: 205 EMQISGVE-PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
M SG P+ T V+ +C +G + + K DF + V L+D++ RC
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 264 GCIEFARQVFQR-------------------------------MHKRTLVSWNSIIVGFA 292
G ++FA ++F + M +R +VSWN +I +
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
+G V EAL M ++G + D ++T +LTAC+ + G + + K+ R P+I
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQ---LHAKVIRSLPQI 303
Query: 353 EHY--GCIVDLYSRAGRLEDALNVVENMPMKPN----EVVLGSLLAACRTK 397
+ Y +++LY++ G ++A V ++ + + ++ GSL C +K
Sbjct: 304 DPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSK 354
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 141/306 (46%), Gaps = 38/306 (12%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W I+ +SGR+ EA M G + T+ + L+ CA S L G +
Sbjct: 235 VVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFS--LGWGKQL 292
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V + L + + V +AL+++YAK G
Sbjct: 293 HAKVIR-SLPQIDPYVASALIELYAKCG-------------------------------S 320
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A R+F+ + R+++SWT L+ G ++ F +++E F +M+ + D + ++++
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C N L +G +H LK + V N+LI LY++CG ++ A VF M +R +VSW
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
S+I ++ G + +A E+F+ M + +++ L A G EDGL+ + M
Sbjct: 441 TSMITAYSQIGNIIKAREFFDGMDTR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLS 496
Query: 345 IYRVSP 350
V+P
Sbjct: 497 QKDVTP 502
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 81/210 (38%), Gaps = 37/210 (17%)
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR------ 270
+ L +C + G L +H ++ V + NTL+ Y CG + AR
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 271 --------------------------QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
++F RM +R + SWN+++ G+ + LE F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 305 NSMQKEGFK-PDGVSFTGALTACSHAGLIEDGLRYFDIMKKI-YRVSPRIEHYGCIVDLY 362
SM + G P+ +F + +C G E + + K + P +E +VD++
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVDMF 183
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
R G ++ A + + +P S+LA
Sbjct: 184 VRCGYVDFASRLFSQIE-RPTIFCRNSMLA 212
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 259/454 (57%), Gaps = 39/454 (8%)
Query: 48 WTSSISRHCRSGRI--AEAALEFTRMTLHG-TNPNHITFITLLSGCADFPSQCLFLGAMI 104
W S I R C + E + F +M G NPN T +L C+ + L G +
Sbjct: 58 WNSMI-RGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSA--LEEGQQV 114
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V K G FG S F A+++ Y + D
Sbjct: 115 HANVLKSG------------------FG--------------SSPFVETALVNFYAKCED 142
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I A ++FDE+ R+ ++W+ +++G+ + G EAL FR+MQ +GV PD VT++SV++A
Sbjct: 143 IVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISA 202
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA G L G W+H Y+ KQ + ++++ L+++Y++CGCIE A++VF M + +W
Sbjct: 203 CAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAW 262
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+S+IVG A+NG +ALE F M++ KP+ V+F G L+AC+H+GL+ +G RY+ M +
Sbjct: 263 SSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLE 322
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ + P +E YGC+VDL RA +EDA +VE MP+ PN V+ +LL C+ ++ +E
Sbjct: 323 -FGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSE 381
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ + L++L+P NY+LL+N+YA++ +W+ ++R+ MKG GI+ PG SSIE+ +
Sbjct: 382 VVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLV 441
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
HEF+ GD SH E+ + +L +S + G+ P
Sbjct: 442 HEFVMGDWSHPEAMEVREILRDISKRVHAVGHQP 475
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 118/221 (53%), Gaps = 3/221 (1%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVK-RGYFEEALECFREMQISGV-EPDYVTIIS 220
GDI+ A ++F ++ + SW +++ G + + +E + FR+M G P+ T+
Sbjct: 38 GDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAF 97
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VL AC+ V L G +H VLK F + V L++ Y++C I A +VF + R
Sbjct: 98 VLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRN 157
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
LV+W+++I G+A G V EAL F MQK G PD V+ ++AC+ +G ++ G
Sbjct: 158 LVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHA 217
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ K + +E +V++Y++ G +E A V + MP+K
Sbjct: 218 YINK-QLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVK 257
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 119/246 (48%), Gaps = 35/246 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ IS + R G + EA F M G P+ +T ++++S CA S L G +H
Sbjct: 159 VAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACA--ASGALDTGKWVH 216
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K L ++ + TAL++MYAK G ++ A VFDAM VK + W++MI G
Sbjct: 217 AYINK-QLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLA----- 270
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+NG E+ALE F M+ + V+P++VT I VL+AC
Sbjct: 271 ---------------------INGLA-----EDALEEFFRMEEAKVKPNHVTFIGVLSAC 304
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSW 284
A+ G + G +L+ ++++ ++DL R +E A + + M V W
Sbjct: 305 AHSGLVSEGRRYWSSMLEFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIW 364
Query: 285 NSIIVG 290
+++VG
Sbjct: 365 RTLLVG 370
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V T W+S I +G +A EF RM PNH+TFI +LS CA S + G
Sbjct: 256 VKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAH--SGLVSEG 313
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDGYM 160
+ + G+ + + G ++D+ + ++ A + + M + + W ++ G
Sbjct: 314 RRYWSSMLEFGIVPSMELYG-CMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCK 372
Query: 161 RRGDIES----AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
+ +++ A R+ + P +A ++ L N + +E+ + ++M+ G
Sbjct: 373 KSKNLDKSEVVAQRLLELEP-HNAENYILLSNLYASMSQWEKMSQVRKKMKGMG------ 425
Query: 217 TIISVLNACANVGTLGIGLWIHRYVL 242
I + C+++ G+ +H +V+
Sbjct: 426 --IKAVPGCSSIEVDGL---VHEFVM 446
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 264/466 (56%), Gaps = 5/466 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT IS + G E+ F +M + TL+SGC CL G +H
Sbjct: 357 VAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCL--GRQLH 414
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L K G V+V +L+ MYAK + A +F M K +W +MI Y + G++
Sbjct: 415 SLCLKSG-QIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNV 473
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNA 224
A FD M ++ I+W A+L +++ G E+ L ++ M V PD+VT +++
Sbjct: 474 AKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKG 533
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G +G I +K + V N +I +YS+CG I AR+VF ++ + +VSW
Sbjct: 534 CADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSW 593
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G++ +G +A+E F+ + K G KPD +S+ L+ CSH+GL+++G YFD+MK+
Sbjct: 594 NAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKR 653
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ +SP +EH+ C+VDL RAG L +A +++++MPMKP V G+LL+AC+ G+ LAE
Sbjct: 654 AHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAE 713
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
K++ +LD +Y+L+A +YA GK D + +IR+ M+ +GI+K PG S +E+ + +
Sbjct: 714 LAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKV 773
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV-PETVAGELYEND 509
H F A D SH + I L+ L + GYV ++ E++ ++
Sbjct: 774 HVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIHHSE 819
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 141/280 (50%), Gaps = 4/280 (1%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPSQCLFLGAMIHG 106
W + +S + +S + + F M G + PN T + C L L +
Sbjct: 125 WNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLL--A 182
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
+V K +++ V AL+DM+ + G +DLA+ +F ++ + F N+M+ GY++ ++
Sbjct: 183 MVQKFD-SQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVD 241
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A+ +FD MP RD +SW +++ + G EAL+ +MQ GV D T S L ACA
Sbjct: 242 HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 301
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ +L G +H V++ + V + L++LY++ GC + A+ VF +H R V+W
Sbjct: 302 RLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTV 361
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
+I GF G E++E FN M+ E D + ++ C
Sbjct: 362 LISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC 401
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 149/314 (47%), Gaps = 39/314 (12%)
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRM-DLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
HG + +GL + V + LL Y G + D ++ + + T N M++GY + G
Sbjct: 47 HGRLVAVGL-ASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLG 105
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE-PDYVTIISVL 222
+ AV +F MP RD SW L++G+ + + +LE F M SG P+ T+ +
Sbjct: 106 RLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAM 165
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR------- 275
+C +G + L + V K D +D+ +V L+D++ RCG ++ A ++F R
Sbjct: 166 KSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMF 225
Query: 276 ------------------------MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
M +R +VSWN ++ + +G V EAL+ MQ +G
Sbjct: 226 CRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG 285
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLE 369
+ D ++T +LTAC+ + G + + ++ R P I+ Y +V+LY+++G +
Sbjct: 286 VRLDSTTYTSSLTACARLSSLRWGKQ---LHAQVIRNLPHIDPYVASALVELYAKSGCFK 342
Query: 370 DALNVVENMPMKPN 383
+A V ++ + N
Sbjct: 343 EAKGVFNSLHDRNN 356
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 144/306 (47%), Gaps = 38/306 (12%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W +S +SGR+ EA M G + T+ + L+ CA S L G +
Sbjct: 255 VVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS--LRWGKQL 312
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V + L + V +AL+++YAK G A VF N++ D
Sbjct: 313 HAQVIR-NLPHIDPYVASALVELYAKSGCFKEAKGVF-----------NSLHD------- 353
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
R+ ++WT L++GF++ G F E++E F +M+ + D + ++++
Sbjct: 354 -------------RNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 400
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C + L +G +H LK V V N+LI +Y++C ++ A +F+ M+++ +VSW
Sbjct: 401 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSW 460
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
S+I ++ G V +A E+F+ M ++ +++ L A G EDGLR + +M
Sbjct: 461 TSMITAYSQVGNVAKAREFFDGMSEKNV----ITWNAMLGAYIQHGAEEDGLRMYKVMLS 516
Query: 345 IYRVSP 350
V P
Sbjct: 517 EEYVRP 522
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 171/511 (33%), Positives = 270/511 (52%), Gaps = 60/511 (11%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD------------ 92
V WTS + + R+G +AEA R+ H + N +++ +L G
Sbjct: 117 VVSWTSMVRGYVRNGDVAEA----ERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFD 172
Query: 93 -FPSQCLFLGAMIHGLVCKLG-----------LDRNNVMVGTALLDMYAKFGRMDLATVV 140
P + + + G C+ G + + NV+ TA++ YA+ G++D+A +
Sbjct: 173 MMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKL 232
Query: 141 FDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV----------------------- 177
F+ M ++ +W AM+ GY G + A +FD MPV
Sbjct: 233 FEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKAR 292
Query: 178 --------RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVG 229
RD +W+A++ + ++GY EAL FR MQ G+ ++ ++ISVL+ C ++
Sbjct: 293 RVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLA 352
Query: 230 TLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIV 289
+L G +H +++ +F ++ V + LI +Y +CG + A+QVF R + +V WNS+I
Sbjct: 353 SLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMIT 412
Query: 290 GFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVS 349
G++ +G EAL F+ M G PD V+F G L+ACS++G +++GL F+ MK Y+V
Sbjct: 413 GYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVE 472
Query: 350 PRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKY 409
P IEHY C+VDL RA ++ +A+ +VE MPM+P+ +V G+LL ACRT + LAE ++
Sbjct: 473 PGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEK 532
Query: 410 LVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMA 469
L L+P YVLL+NMYA G+W +R +K R + K PG S IE+ +H F
Sbjct: 533 LAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTG 592
Query: 470 GD-RSHIESEHIYSMLELLSFDLKLCGYVPE 499
GD + H E I MLE L L+ GY P+
Sbjct: 593 GDSKGHPEQPIIMKMLEKLGGLLREAGYCPD 623
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 152/327 (46%), Gaps = 27/327 (8%)
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
+ + N + L+ + K G + A VFD M ++ +W +M+ GY+R GD+ A R+F
Sbjct: 81 MPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLF 140
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
MP ++ +SWT +L G ++ G ++A + F M E D V + +++ G L
Sbjct: 141 WHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMP----EKDVVAVTNMIGGYCEEGRLD 196
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
R + + K NV ++ Y+R G ++ AR++F+ M +R VSW ++++G+
Sbjct: 197 EA----RALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYT 252
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
+G + EA F++M KP V + G ++ R F MK+ +
Sbjct: 253 HSGRMREASSLFDAMP---VKPV-VVCNEMIMGFGLNGEVDKARRVFKGMKERDNGT--- 305
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKY 409
+ ++ +Y R G +AL + M + N L S+L+ C + + +++
Sbjct: 306 --WSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQ 363
Query: 410 LV----DLDPGVDSNYVLLANMYAAVG 432
LV D D V S +L MY G
Sbjct: 364 LVRSEFDQDLYVAS---VLITMYVKCG 387
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 12/206 (5%)
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A ++F+ M +++ +WN +I G+++ G + A R+FD MP R+ +SWT+++ G+V+ G
Sbjct: 74 ALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDV 133
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
EA F M V V+ +L G + R + + +V +
Sbjct: 134 AEAERLFWHMPHKNV----VSWTVMLGGLLQEGRVDDA----RKLFDMMPEKDVVAVTNM 185
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
I Y G ++ AR +F M KR +V+W +++ G+A NG V A + F M + +
Sbjct: 186 IGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPER----NE 241
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIM 342
VS+T L +H+G + + FD M
Sbjct: 242 VSWTAMLLGYTHSGRMREASSLFDAM 267
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 55/283 (19%)
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV--RDAISWTALLNG 189
GR L + +R++ + + + I Y R G ++ A ++FDE P+ R SW A++
Sbjct: 5 GRAILRRCMMLQVRLQCTTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAA 64
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
+ + EAL F +M + N
Sbjct: 65 YFEARQPREALLLFEKMP---------------------------------------QRN 85
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
N LI + + G + AR+VF M R +VSW S++ G+ NG V EA F M
Sbjct: 86 TVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPH 145
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KKIYRVSPRIEHYGCIVDLYSRAGR 367
+ VS+T L G ++D + FD+M K + V+ ++ Y GR
Sbjct: 146 KNV----VSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTN-------MIGGYCEEGR 194
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
L++A + + MP K N V ++++ G + +A +L + +
Sbjct: 195 LDEARALFDEMP-KRNVVTWTAMVSGYARNGKVDVARKLFEVM 236
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 259/454 (57%), Gaps = 39/454 (8%)
Query: 48 WTSSISRHCRSGRIA--EAALEFTRMTLHG-TNPNHITFITLLSGCADFPSQCLFLGAMI 104
W S I R C + E + F +M G NPN T +L C+ + L G +
Sbjct: 127 WNSMI-RGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSA--LEEGQQV 183
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V K G FG S F A+++ Y + D
Sbjct: 184 HANVLKSG------------------FG--------------SSPFVETALVNFYAKCED 211
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I A ++FDE+ R+ ++W+ +++G+ + G EAL FR+MQ +GV PD VT++SV++A
Sbjct: 212 IVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISA 271
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA G L G W+H Y+ KQ + ++++ L+++Y++CGCIE A++VF M + +W
Sbjct: 272 CAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAW 331
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+S+IVG A+NG +ALE F M++ KP+ V+F G L+AC+H+GL+ +G RY+ M +
Sbjct: 332 SSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLE 391
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ + P +E YGC+VDL RA +EDA +VE MP+ PN V+ +LL C+ ++ +E
Sbjct: 392 -FGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSE 450
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ + L++L+P NY+LL+N+YA++ +W+ ++R+ MKG GI+ PG SSIE+ +
Sbjct: 451 VVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLV 510
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
HEF+ GD SH E+ + +L +S + G+ P
Sbjct: 511 HEFVMGDWSHPEAMEVREILRDISKRVHAVGHQP 544
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 118/221 (53%), Gaps = 3/221 (1%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVK-RGYFEEALECFREMQISGV-EPDYVTIIS 220
GDI+ A ++F ++ + SW +++ G + + +E + FR+M G P+ T+
Sbjct: 107 GDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAF 166
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VL AC+ V L G +H VLK F + V L++ Y++C I A +VF + R
Sbjct: 167 VLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRN 226
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
LV+W+++I G+A G V EAL F MQK G PD V+ ++AC+ +G ++ G
Sbjct: 227 LVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHA 286
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ K + +E +V++Y++ G +E A V + MP+K
Sbjct: 287 YINK-QLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVK 326
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 119/246 (48%), Gaps = 35/246 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ IS + R G + EA F M G P+ +T ++++S CA S L G +H
Sbjct: 228 VAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACA--ASGALDTGKWVH 285
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K L ++ + TAL++MYAK G ++ A VFDAM VK + W++MI G
Sbjct: 286 AYINK-QLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLA----- 339
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+NG E+ALE F M+ + V+P++VT I VL+AC
Sbjct: 340 ---------------------INGLA-----EDALEEFFRMEEAKVKPNHVTFIGVLSAC 373
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVSW 284
A+ G + G +L+ ++++ ++DL R +E A + + M V W
Sbjct: 374 AHSGLVSEGRRYWSSMLEFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIW 433
Query: 285 NSIIVG 290
+++VG
Sbjct: 434 RTLLVG 439
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V T W+S I +G +A EF RM PNH+TFI +LS CA S + G
Sbjct: 325 VKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAH--SGLVSEG 382
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDGYM 160
+ + G+ + + G ++D+ + ++ A + + M + + W ++ G
Sbjct: 383 RRYWSSMLEFGIVPSMELYG-CMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCK 441
Query: 161 RRGDIES----AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
+ +++ A R+ + P +A ++ L N + +E+ + ++M+ G
Sbjct: 442 KSKNLDKSEVVAQRLLELEP-HNAENYILLSNLYASMSQWEKMSQVRKKMKGMG------ 494
Query: 217 TIISVLNACANVGTLGIGLWIHRYVL 242
I + C+++ G+ +H +V+
Sbjct: 495 --IKAVPGCSSIEVDGL---VHEFVM 515
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 255/464 (54%), Gaps = 36/464 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + + + ++ +A + +MT G +P+ T +LL C+ S L G IHG
Sbjct: 278 WNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS--LHYGEEIHGF 335
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ GL + +G +LL +Y G+ A V+FD M +S
Sbjct: 336 ALRNGLAVDP-FIGISLLSLYICCGKPFAAQVLFDGMEHRS------------------- 375
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+SW ++ G+ + G +EA+ FR+M G++P + I+ V AC+
Sbjct: 376 ------------LVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQ 423
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ L +G +H + LK +++ V +++ID+Y++ GCI ++++F R+ ++ + SWN I
Sbjct: 424 LSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVI 483
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+ ++G EALE F M + G KPD +FTG L ACSHAGL+EDGL YF+ M ++
Sbjct: 484 IAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHN 543
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ P++EHY C+VD+ RAGR++DAL ++E MP P+ + SLL++CR G++ L E++
Sbjct: 544 IEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVA 603
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
L++L+P NYVL++N++A GKWD ++R MK G+QK G S IE+G +H F
Sbjct: 604 NKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNF 663
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVPET--VAGELYEND 509
+ GD E E + L + GY P+T V +L E D
Sbjct: 664 LIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEED 707
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 198/440 (45%), Gaps = 77/440 (17%)
Query: 47 QWTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
QW + +S + R+ +A F+ + ++ P++ T ++ CA L LG +IH
Sbjct: 174 QWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLD--LGLGQIIH 231
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G+ K+ L ++V VG AL+ MY K G ++
Sbjct: 232 GMATKMDL-VSDVFVGNALIAMYGKCGLVE------------------------------ 260
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E+ R+FD M + SW ALL G+ + +AL+ + +M SG++PD+ TI S+L AC
Sbjct: 261 EAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 320
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
+ + +L G IH + L+ + + +L+ LY CG A+ +F M R+LVSWN
Sbjct: 321 SRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWN 380
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG--LRYF---- 339
+I G++ NG EA+ F M +G +P ++ ACS + G L F
Sbjct: 381 VMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKA 440
Query: 340 DIMKKIYRVSPRIEHY---GC---------------------IVDLYSRAGRLEDALNVV 375
+ + I+ S I+ Y GC I+ Y GR ++AL +
Sbjct: 441 HLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELF 500
Query: 376 ENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKY------LVDLDPGVDSNYVLLAN 426
E M +KP++ +L AC G L E ++Y L +++P ++ +Y + +
Sbjct: 501 EKMLRLGLKPDDFTFTGILMACSHAG---LVEDGLEYFNQMLNLHNIEPKLE-HYTCVVD 556
Query: 427 MYAAVGKWDGAGKIRRTMKG 446
M G+ D A ++ M G
Sbjct: 557 MLGRAGRIDDALRLIEEMPG 576
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 139/310 (44%), Gaps = 48/310 (15%)
Query: 31 ISIQTNNSKS------TVNPTVQWTSSISRHCRSGRIAEAALEFTR-----MTLHGTNPN 79
+S QT +KS + N I + C SG + EA L+F + + L +
Sbjct: 47 LSAQTRQTKSLSFANSSTNRQFSSLHEIKKLCESGNLKEA-LDFLQRESDDVVLDSAQRS 105
Query: 80 HITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATV 139
+ LL C + + +G +H +V N+ ++ T ++ MY+ G + +
Sbjct: 106 EAMGV-LLQACGQ--RKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRM 162
Query: 140 VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
VFD +R K+ F W A+++ + + FE+A
Sbjct: 163 VFDKLRRKNLF-------------------------------QWNAIVSAYTRNELFEDA 191
Query: 200 LECFREM-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
+ F E+ ++ +PD T+ V+ ACA + LG+G IH K D +V V N LI
Sbjct: 192 MSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIA 251
Query: 259 LYSRCGCIEFA-RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
+Y +CG +E A ++VF M +T+ SWN+++ G+A N +AL+ + M G PD
Sbjct: 252 MYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWF 311
Query: 318 SFTGALTACS 327
+ L ACS
Sbjct: 312 TIGSLLLACS 321
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 7/216 (3%)
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT-LIDLYSRCGCIEFARQVFQRMHKR 279
+L AC + +G +H V N V NT +I +YS CG +R VF ++ ++
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDGL-R 337
L WN+I+ + N +A+ F+ + KPD + + AC AGL++ GL +
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLGLGQ 228
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
M + + ++ +Y + G +E+A+ V ++ +LL
Sbjct: 229 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQN 288
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGK 433
D A L YL D G+D ++ + ++ A +
Sbjct: 289 SDPRKALDL--YLQMTDSGLDPDWFTIGSLLLACSR 322
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 209/315 (66%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N +ID Y R G++ +A ++FD MP RD ISWT+++ G+ + F +A++ F+EM + V+
Sbjct: 164 NTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVK 223
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD VT+ SVL+ACA++G L +G +H Y+ + + ++ V N+LID+Y +CG +E A +V
Sbjct: 224 PDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEV 283
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F RM + VSW S+I G AVNGF AL+ F+ M +EG +P +F G L AC+HAGL+
Sbjct: 284 FHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLV 343
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
GL YF+ M+ ++ + P ++HYGC+VDL SR+G ++ A ++ MP+ P+ VV LL+
Sbjct: 344 NKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLS 403
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
AC+ G+++LAE K L++LDP NYVLL+N YA V +WD A K+R M+ +QK
Sbjct: 404 ACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKP 463
Query: 453 PGLSSIEIGSGIHEF 467
G SSIE+ + +
Sbjct: 464 SGSSSIEVDGMVSNY 478
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 125/232 (53%), Gaps = 1/232 (0%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F NA+I Y G + A +MFD M RD +SW L+ G+ + ++E L F M +
Sbjct: 60 FVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAA 119
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
++ D VT++ ++ AC+++G + +Y+ + + + +V + NTLID+Y R G + A
Sbjct: 120 NIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAA 179
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
R++F M KR ++SW S+I G++ +A++ F M KPD V+ L+AC+H
Sbjct: 180 RKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHL 239
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
G ++ G +++ + V I ++D+Y + G +E AL V M K
Sbjct: 240 GKLDVGWAVHHYIRR-HGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDK 290
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 118/268 (44%), Gaps = 48/268 (17%)
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
V+ N+ I IH + LK F+ + V N LI +Y+ CG + FA+++F M R
Sbjct: 30 VVALTTNINASTISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRD 89
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
LVSWN++I G++ E L F++M K D V+ + ACSH G E + D
Sbjct: 90 LVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWE----FAD 145
Query: 341 IM-KKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMP------------------ 379
M K I + I+ Y ++D+Y R G L A + +NMP
Sbjct: 146 SMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQAS 205
Query: 380 ----------------MKPNEVVLGSLLAACRTKGDIILAERLMKYL----VDLDPGVDS 419
+KP++V + S+L+AC G + + + Y+ V D V +
Sbjct: 206 QFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGN 265
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKGR 447
+ L +MY G + A ++ MK +
Sbjct: 266 S---LIDMYCKCGMVEKALEVFHRMKDK 290
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 108/233 (46%), Gaps = 35/233 (15%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ WTS I+ + ++ + ++A F M P+ +T ++LS CA L +G +
Sbjct: 191 VISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGK--LDVGWAV 248
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + + G+ + ++ VG +L+DM Y + G
Sbjct: 249 HHYIRRHGV-QADIYVGNSLIDM-------------------------------YCKCGM 276
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A+ +F M +D++SWT++++G G+ AL+ F +M GV+P + T + +L A
Sbjct: 277 VEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLA 336
Query: 225 CANVGTLGIGL-WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
CA+ G + GL + +K ++DL SR G I+ A + ++M
Sbjct: 337 CAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKM 389
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 62/147 (42%), Gaps = 36/147 (24%)
Query: 45 TVQWTSSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
+V WTS IS +G A +AL+ F++M G P H TF+ +L CA
Sbjct: 292 SVSWTSVISGLAVNG-FANSALDLFSQMLREGVQPTHGTFVGILLACAH----------- 339
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
GLV K GL+ F M+ + AM+ + ++D R G
Sbjct: 340 -AGLVNK-GLEY---------------FESMESVHGLVPAMK-----HYGCVVDLLSRSG 377
Query: 164 DIESAVRMFDEMP-VRDAISWTALLNG 189
+I+ A +MP V D + W LL+
Sbjct: 378 NIDKAYEFIKKMPIVPDVVVWRILLSA 404
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 167/495 (33%), Positives = 265/495 (53%), Gaps = 38/495 (7%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
+V+ V + + I+ +G ++A F RM G T +++L C+ +
Sbjct: 116 SVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLD--IKR 173
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G IHG + L + V V AL +MYAK G +D A +FD M K+ +WN+MI GY+
Sbjct: 174 GKQIHGRIVATSLGES-VFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYL 232
Query: 161 RRGD-----------------------------------IESAVRMFDEMPVRDAISWTA 185
+ G I+ A + F E+ +D + WT
Sbjct: 233 QNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTT 292
Query: 186 LLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD 245
++ G + G E+AL FREM + V PD TI SV+++CA + +L G +H +
Sbjct: 293 MMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFG 352
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
++ V + L+D+YS+CG A VF+RM R ++SWNS+I+G+A NG EAL +
Sbjct: 353 VDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYE 412
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
M E KPD ++F G L+AC HAGL+E G YF + KI+ ++P +HY C+++L RA
Sbjct: 413 EMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRA 472
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLA 425
G ++ A++++++M +PN ++ +LL+ CR D+ E ++L +LDP Y++L+
Sbjct: 473 GYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLS 532
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLE 485
N+YAA G+W +R MK I+K S IEI + +H+F+A DR+H E+E IY L
Sbjct: 533 NIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELN 592
Query: 486 LLSFDLKLCGYVPET 500
L L+ G+ P+T
Sbjct: 593 RLIKKLQESGFTPDT 607
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 172/332 (51%), Gaps = 13/332 (3%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
LL +YAK G + A +FD M + F+WNAM+ Y + G++E +FD+M V DA+S+
Sbjct: 64 LLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSY 123
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
++ GF G +ALE F MQ G E T +SVL+AC+ + + G IH ++
Sbjct: 124 NTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVA 183
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
++V V N L ++Y++CG ++ AR +F RM + +VSWNS+I G+ NG +
Sbjct: 184 TSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKL 243
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F MQ G PD V+ + L+A G I++ + F +K+ +V GC +
Sbjct: 244 FCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGC-----A 298
Query: 364 RAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
+ G+ EDAL + M + +P+ + S++++C + + + V GVD +
Sbjct: 299 QNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIF--GVDHD 356
Query: 421 YVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
++ L +MY+ G+ A + + M R +
Sbjct: 357 LLVSSALVDMYSKCGETADAWIVFKRMLTRNV 388
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 265/457 (57%), Gaps = 13/457 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WTS I + ++G +AEA + F M + + ++ ++SG D +G +
Sbjct: 198 VVSWTSMICGYVKAGDMAEAQVLFDSMPV----KDLASWNVMVSGYMD-------IGDCV 246
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ + + ++ ++ + K G ++ A FD M K+ +W M+DGY++ GD
Sbjct: 247 NARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKNGD 306
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A +FD+MP+++ ++W+ ++ G+ + G +ALE F + ++PD I+ +++A
Sbjct: 307 TNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISA 366
Query: 225 CANVGTLGIG-LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
C+ +G + IH YV D ++V +LID+Y++CG IE A Q+F+ H + L+
Sbjct: 367 CSQLGIIDAAESIIHNYVGPSLLSD-LRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLC 425
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
++++I A +G +A+ F+ MQ+ KPD V+F G LTAC+H GL+++G +YF M
Sbjct: 426 YSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMT 485
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ + + P +HY C+VDL R G LE+A N++ NMP+ P+ VV G+LLAACR ++ LA
Sbjct: 486 EEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLA 545
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E L ++P NY+LL+N+YAA G+W K+R ++ ++K G S IE+
Sbjct: 546 EVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHV 605
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+HEF+ GD SH +S+ I +L LL D+KL GY+ ++
Sbjct: 606 VHEFVMGDMSHTDSDSISLILYLLCEDMKLSGYLIDS 642
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 173/380 (45%), Gaps = 40/380 (10%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WTS I + + + EA F +M + + T ++L A G ++G
Sbjct: 69 WTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTR--FKGGQAVYGF 126
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V K G +++V ++LD++ + ++D A FD M K +WN MI GY ++
Sbjct: 127 VLKYGF-AFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVDI 185
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE------PDYVTIISV 221
A + FD MP R+ +SWT+++ G+VK G EA F M + + Y+ I
Sbjct: 186 ARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDC 245
Query: 222 LNACANVGTLGI---GLW---------IHRYVLKQDFKD-----NVKVCNTLIDLYSRCG 264
+NA G + I G W +DF D NV ++D Y + G
Sbjct: 246 VNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKNG 305
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
AR +F +M + LV+W+++I G+A NG +ALE F +++ KPD G ++
Sbjct: 306 DTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIIS 365
Query: 325 ACSHAGLIEDGLRYFDIMKKIYR--VSPR----IEHYGCIVDLYSRAGRLEDALNVVENM 378
ACS G+I D + I V P + + ++D+Y++ G +E AL + E M
Sbjct: 366 ACSQLGII-------DAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFE-M 417
Query: 379 PMKPNEVVLGSLLAACRTKG 398
+ + +++AA G
Sbjct: 418 AHPKDLLCYSTMIAALANHG 437
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 31/289 (10%)
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A ++ ++ S F N ++ Y R G + A ++FDE+ +A WT+L++G+V+ +
Sbjct: 23 ARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQY 82
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
+EA F +M+ + TI SVL A A + G ++ +VLK F ++ V N++
Sbjct: 83 DEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAFDLIVQNSV 142
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
+DL+ RC ++ ARQ F M ++ +VSWN +I G+ N V A ++F+ M +
Sbjct: 143 LDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNV---- 198
Query: 317 VSFTGALTACSHAGLIEDGLRYFD-----------IMKKIYR-----VSPRI-------- 352
VS+T + AG + + FD +M Y V+ RI
Sbjct: 199 VSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDCVNARIIFGKMPIH 258
Query: 353 --EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
+ ++ + +AG LE A + + MP K N + G +L GD
Sbjct: 259 DTGSWNIMISGFCKAGELESAKDFFDRMPNK-NVISWGIMLDGYIKNGD 306
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 5/165 (3%)
Query: 218 IISVLNACANVGTLGIGLWIH-RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
I+ +++ C + +L IH R +++ + V N L+ LYSR G ++A +VF +
Sbjct: 5 ILHIIHNCKTLKSLKS---IHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEI 61
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+ W S+I G+ N EA F M++E + + L A + + G
Sbjct: 62 TQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQ 121
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ + K Y + + ++DL+ R +++ A + M K
Sbjct: 122 AVYGFVLK-YGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEK 165
>gi|52076160|dbj|BAD46673.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 678
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 256/452 (56%), Gaps = 8/452 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + + H RSG + F +M + G + T L+ CA+ P G IH
Sbjct: 222 VAWNTLLMGHSRSGNAKQCLALFNQMWMSGLTCDDATLCILVDACAELPDPST--GFAIH 279
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+V + G + V +L+ Y KF +D A +F++M+ +++ +WN++ID + R G I
Sbjct: 280 KVVVQSGWN-GIPEVNNSLISFYTKFSLLDCAVQIFESMKTRTTASWNSLIDAHARFGYI 338
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNA 224
E A +F+ P + ISWTA++ GF + EAL F +M ++PD T +VL+A
Sbjct: 339 EQAALLFESAPETNIISWTAMIGGFARNSLTSEALAHFVKMLTQEYIQPDDFTFGAVLHA 398
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA+ L G +H + F + V N L+D+Y++CG +E A VF +H++ LVSW
Sbjct: 399 CASAPCLASGRMVHSCAFQGGFASYLYVANNLVDMYAKCGDVEGANNVFDAIHQKDLVSW 458
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+++ GFA+NG EALE + M PD V+FTG LTACSH+GL+E G +F+ M
Sbjct: 459 NTMLFGFAINGLPKEALEVYEIMTYHNVSPDEVTFTGLLTACSHSGLLEQGRAFFESMMS 518
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKG-DI 400
++ V P+ EH C++D+Y+R+G + A+ ++E P P + +LL+ C ++ D
Sbjct: 519 VHGVQPKPEHLSCVLDMYARSGNIAKAIEMMEQYPEIVKSPGSGLSEALLSFCSSENLDF 578
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+ ++ +V P D+ YV+L+N+ A G+WD A ++RR M +GI+K PG S IE+
Sbjct: 579 WVGRKVGDDVVARAPARDTGYVMLSNLLCASGRWDEAERVRRAMAEQGIKKSPGCSWIEV 638
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+ F++ +++ ++ +Y ++ LL ++++
Sbjct: 639 KGKVKVFVSSEQAIDLTDTVYGLIYLLDYEMR 670
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 138/294 (46%), Gaps = 33/294 (11%)
Query: 120 VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD 179
VG AL+ MYAK R A F M +++ +W +++ ++ G +E A +FDEMP +
Sbjct: 161 VGNALVSMYAKCARAADAARAFREMPERNALSWCSLLHAFVVSGHMELAHELFDEMPSKS 220
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHR 239
++W LL G + G ++ L F +M +SG+ D T+ +++ACA + G IH+
Sbjct: 221 NVAWNTLLMGHSRSGNAKQCLALFNQMWMSGLTCDDATLCILVDACAELPDPSTGFAIHK 280
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIV---------- 289
V++ + +V N+LI Y++ ++ A Q+F+ M RT SWNS+I
Sbjct: 281 VVVQSGWNGIPEVNNSLISFYTKFSLLDCAVQIFESMKTRTTASWNSLIDAHARFGYIEQ 340
Query: 290 ---------------------GFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACS 327
GFA N EAL +F M +E +PD +F L AC+
Sbjct: 341 AALLFESAPETNIISWTAMIGGFARNSLTSEALAHFVKMLTQEYIQPDDFTFGAVLHACA 400
Query: 328 HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
A + G R + + +VD+Y++ G +E A NV + + K
Sbjct: 401 SAPCLASG-RMVHSCAFQGGFASYLYVANNLVDMYAKCGDVEGANNVFDAIHQK 453
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 100/264 (37%), Gaps = 67/264 (25%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTR--------------------------------MT 72
T W S I H R G I +AAL F +T
Sbjct: 322 TASWNSLIDAHARFGYIEQAALLFESAPETNIISWTAMIGGFARNSLTSEALAHFVKMLT 381
Query: 73 LHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFG 132
P+ TF +L CA P CL G M+H + G + + V L+DMYAK G
Sbjct: 382 QEYIQPDDFTFGAVLHACASAP--CLASGRMVHSCAFQGGF-ASYLYVANNLVDMYAKCG 438
Query: 133 RMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVK 192
++ A VFDA+ K +WN M L GF
Sbjct: 439 DVEGANNVFDAIHQKDLVSWNTM-------------------------------LFGFAI 467
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK-QDFKDNVK 251
G +EALE + M V PD VT +L AC++ G L G ++ + +
Sbjct: 468 NGLPKEALEVYEIMTYHNVSPDEVTFTGLLTACSHSGLLEQGRAFFESMMSVHGVQPKPE 527
Query: 252 VCNTLIDLYSRCGCIEFARQVFQR 275
+ ++D+Y+R G I A ++ ++
Sbjct: 528 HLSCVLDMYARSGNIAKAIEMMEQ 551
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 44/246 (17%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+FD MP RDA++W A+L + + AL F M+ PD ++ + L A A + +
Sbjct: 84 VFDAMPRRDAVAWNAMLTAYARAARPRAALALFARMR----APDAFSLTAALAAAAALRS 139
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLY----------------------SRC----- 263
G +H +L+ + + V N L+ +Y S C
Sbjct: 140 PAAGAQLHGRLLRLGLRAPLPVGNALVSMYAKCARAADAARAFREMPERNALSWCSLLHA 199
Query: 264 ----GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
G +E A ++F M ++ V+WN++++G + +G + L FN M G D +
Sbjct: 200 FVVSGHMELAHELFDEMPSKSNVAWNTLLMGHSRSGNAKQCLALFNQMWMSGLTCDDATL 259
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKIYRVS----PRIEHYGCIVDLYSRAGRLEDALNVV 375
+ AC+ + D F I K + + P + + ++ Y++ L+ A+ +
Sbjct: 260 CILVDACAE---LPDPSTGFAIHKVVVQSGWNGIPEVNN--SLISFYTKFSLLDCAVQIF 314
Query: 376 ENMPMK 381
E+M +
Sbjct: 315 ESMKTR 320
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 252/456 (55%), Gaps = 34/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ S + +G+ EA F +M G P+ + +LS C
Sbjct: 177 VVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGD--------- 227
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
LD +V M++ K+SF +++ Y + G
Sbjct: 228 --------LDSGEWIV--------KHMEEMEMQ---------KNSFVRTTLVNLYAKCGK 262
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A +FD M +D ++W+ ++ G+ + +E +E F +M ++PD +I+ L++
Sbjct: 263 MEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSS 322
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L +G W + + +F N+ + N LID+Y++CG + +VF+ M ++ +V
Sbjct: 323 CASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+ I G A NG V + F +K G PDG +F G L C HAGLI+DGLR+F+ +
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y + +EHYGC+VDL+ RAG L+DA ++ +MPM+PN +V G+LL+ CR D LAE
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE 502
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++K L+ L+P NYV L+N+Y+ G+WD A ++R M +G++K PG S IE+ +
Sbjct: 503 TVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTV 562
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF+A D+SH S+ IY+ LE L +++L G+VP T
Sbjct: 563 HEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTT 598
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 173/336 (51%), Gaps = 36/336 (10%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F + HG N + TF +L C ++ L G +H LV K G + ++V T+LL +
Sbjct: 99 FLSIRKHGLNLHGFTFPLVLKACTRASNRKL--GIDLHSLVVKCGFN-HDVAAMTSLLSI 155
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y+ GR++ DA +V F+E+P R ++WTAL
Sbjct: 156 YSGSGRLN------DAHKV-------------------------FEEIPERSVVTWTALF 184
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
+G+ G EA++ F++M GV PD I+ VL+AC +VG L G WI +++ + + +
Sbjct: 185 SGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQ 244
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
N V TL++LY++CG +E AR VF M ++ +V+W+++I G+A N F E +E+F M
Sbjct: 245 KNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQM 304
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+E KPD S G L++C+ G ++ G ++ + + + ++D+Y++ G
Sbjct: 305 LQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGA 363
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ V + M K + V++ + ++ G + L+
Sbjct: 364 MARGFEVFKEMKEK-DIVIMNAAISGLAKNGHVKLS 398
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 141/318 (44%), Gaps = 44/318 (13%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+F + + L+NGFV F E L+ F ++ G+ T VL AC
Sbjct: 67 LFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASN 126
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
+G+ +H V+K F +V +L+ +YS G + A +VF+ + +R++V+W ++ G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSG 186
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG---LRYFDIMKKIYR 347
+ G EA++ F M + G +PD L+AC H G ++ G +++ + M+
Sbjct: 187 YTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKN 246
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENM----------------------------- 378
R +V+LY++ G++E A +V ++M
Sbjct: 247 SFVRT----TLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFL 302
Query: 379 -----PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV--LLANMYAAV 431
+KP++ + L++C + G + L E + L+D + + ++ L +MYA
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLGEWGIS-LIDRHEFLTNLFMANALIDMYAKC 361
Query: 432 GKWDGAGKIRRTMKGRGI 449
G ++ + MK + I
Sbjct: 362 GAMARGFEVFKEMKEKDI 379
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 271/527 (51%), Gaps = 65/527 (12%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCAD------ 92
K + V W S I+ + R+G+ E F +M L G P H+TF +++ CA
Sbjct: 254 KMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELAL 313
Query: 93 ------------FPSQCLFLGAMIHGLV-CK----------LGLDRNNVMVGTALLDMYA 129
F + + + A++ L CK L + NV+ TA++
Sbjct: 314 VKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCL 373
Query: 130 KFGRMDLATVVFDAMR-----------------------------------VKSSFTWNA 154
+ G D A +F MR +SS A
Sbjct: 374 QNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKTNYERSSSVGTA 433
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
++D Y++ G+ AV++F+ + +D ++W+A+L G+ + G EEA + F ++ G++P+
Sbjct: 434 LLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPN 493
Query: 215 YVTIISVLNACAN-VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
T SV+NACA+ G H Y +K + + V + L+ +Y++ G I+ A +VF
Sbjct: 494 EFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVF 553
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
+R +R LVSWNS+I G++ +G +ALE F+ MQK D V+F G +TAC+HAGL+E
Sbjct: 554 KRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVE 613
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
G +YF+ M + ++P ++HY C++DLYSRAG LE A+ ++ MP P V +LL A
Sbjct: 614 KGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGA 673
Query: 394 CRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKP 453
R ++ L E + L+ L P + YVLL+NMYAA G W +R+ M R ++K+P
Sbjct: 674 ARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEP 733
Query: 454 GLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
G S IE+ + + F+AGD +H S IYS L LS LK GY P+T
Sbjct: 734 GYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDT 780
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 162/346 (46%), Gaps = 39/346 (11%)
Query: 55 HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLD 114
+ R + EA F + P+ T + + CA S LG +H K GL
Sbjct: 68 YSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAG--SLDGKLGRQVHCQCVKFGL- 124
Query: 115 RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDE 174
++V VGT+L+DMY M+ ++ R+FDE
Sbjct: 125 VDHVSVGTSLVDMY-------------------------------MKTENVNDGRRVFDE 153
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
M R+ +SWT+LL G+ G + E F +MQ GV P+ T+ +V+ A N G +GIG
Sbjct: 154 MGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIG 213
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
L +H V+K F++ + V N+LI LYSR G + AR VF +M R V+WNS+I G+ N
Sbjct: 214 LQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRN 273
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR--VSPRI 352
G E E FN MQ G KP ++F + +C A L E L K + + +I
Sbjct: 274 GQDLEVFEIFNKMQLAGVKPTHMTFASVIKSC--ASLRELALVKLMQCKALKSGFTTDQI 331
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
+V L S+ ++DAL++ M N V ++++ C G
Sbjct: 332 VITALMVAL-SKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNG 376
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 194/435 (44%), Gaps = 45/435 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WTS ++ + +G F +M G PN T T+++ + + +G +H
Sbjct: 160 VSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVN--EGVVGIGLQVH 217
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+V K G + A VF N++I Y R G +
Sbjct: 218 AMVVKHGFEE---------------------AIPVF-----------NSLISLYSRLGML 245
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +FD+M +RD ++W +++ G+V+ G E E F +MQ++GV+P ++T SV+ +C
Sbjct: 246 RDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSC 305
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK-RTLVSW 284
A++ L + + LK F + V L+ S+C ++ A +F M + + +VSW
Sbjct: 306 ASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSW 365
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G NG +A+ F+ M++EG KP+ +++ LT + E + +++K
Sbjct: 366 TAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSE---MHAEVIKT 422
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y S + ++D Y + G DA+ V E + K + + ++LA G+ A
Sbjct: 423 NYERSSSVG--TALLDAYVKLGNTIDAVKVFEIIEAK-DLMAWSAMLAGYAQTGETEEAA 479
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+L L+ G+ N +++ A A + + I+ + L++ S
Sbjct: 480 KLFHQLI--KEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMR--LNNALCVSSA 535
Query: 465 HEFMAGDRSHIESEH 479
M R +I+S H
Sbjct: 536 LVTMYAKRGNIDSAH 550
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 4/227 (1%)
Query: 168 AVRMFDEMPVRDAI--SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +FD++P R LL + + +EAL F + S ++PD T+ V N C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A +G +H +K D+V V +L+D+Y + + R+VF M +R +VSW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S++ G++ NG G E F MQ EG P+ + + + A + G++ GL+ ++ K
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK- 222
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
+ I + ++ LYSR G L DA +V + M ++ + V S++A
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIR-DWVTWNSMIA 268
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 162/469 (34%), Positives = 262/469 (55%), Gaps = 25/469 (5%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
T+ W +S + ++G I+EA F +M N +++ ++ G G +
Sbjct: 25 TISWNGLVSGYVQNGMISEARKVFDKMP----ERNVVSWTAMIRGYVQ-------EGLIE 73
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ + NV+ T +L + GR+D A +FD M VK MIDG G
Sbjct: 74 EAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGR 133
Query: 165 IESAVRMFDEMPVRDAISWTALLNG-------------FVKRGYFEEALECFREMQISGV 211
+ A +FDEMP R+ ++WT++++G + ++G+ EAL F MQ GV
Sbjct: 134 LIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGV 193
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
P + ++ISVL+ C ++ +L G +H +++ F ++ V + LI +Y +CG + A++
Sbjct: 194 RPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKR 253
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
VF R + +V WNSII G+A +GF +ALE F+ M PD ++F G L+ACS+ G
Sbjct: 254 VFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGK 313
Query: 332 IEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLL 391
+++GL F+ MK Y+V P+ EHY C+VDL RAG+L +A+N++ENMP++ + +V G+LL
Sbjct: 314 VKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALL 373
Query: 392 AACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQK 451
ACRT ++ LAE K L+ L+P Y+LL+N+Y++ +W ++R+TM+ + ++K
Sbjct: 374 GACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRK 433
Query: 452 KPGLSSIEIGSGIHEFM-AGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
PG S IE+ +H F G SH E E I L L L+ GY P+
Sbjct: 434 SPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPD 482
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 158/359 (44%), Gaps = 58/359 (16%)
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y + R A +FD M ++ +WN ++ GY++ G I A ++FD+MP R+ +SWTA++
Sbjct: 4 YFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMI 63
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
G+V+ G EEA F M E + V+ +L G + + + K
Sbjct: 64 RGYVQEGLIEEAELLFWRMP----ERNVVSWTVMLGGLIEDGRVDEARQLFDMM---PVK 116
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG-------------FAVN 294
D V N + L S IE AR++F M +R +V+W S+I G +
Sbjct: 117 DVVASTNMIDGLCSEGRLIE-AREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERK 175
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR--------YFDI----- 341
GF EAL F+ MQ+EG +P S L+ C ++ G + FDI
Sbjct: 176 GFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVS 235
Query: 342 ---------------MKKIY-RVSPR-IEHYGCIVDLYSRAGRLEDALNVVENM---PMK 381
K+++ R S + I + I+ Y++ G E AL V +M +
Sbjct: 236 SVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIA 295
Query: 382 PNEVVLGSLLAACRTKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGA 437
P+E+ +L+AC G + + MK +DP + +Y + ++ GK + A
Sbjct: 296 PDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTE-HYACMVDLLGRAGKLNEA 353
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 164/480 (34%), Positives = 274/480 (57%), Gaps = 12/480 (2%)
Query: 32 SIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA 91
S+Q NS V WT I + +++ F +M + TL+SGC
Sbjct: 330 SLQDRNS-------VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC- 381
Query: 92 DFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT 151
F L LG +H L K G +R ++V +L+ +YAK G + A VF +M + +
Sbjct: 382 -FNRMDLCLGRQLHSLCLKSGHNRA-IVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVS 439
Query: 152 WNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISG 210
W +MI Y + G+I A FD M R+AI+W A+L +++ G E+ L+ + M
Sbjct: 440 WTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKD 499
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
V PD+VT +++ CA++G +G I + +K NV V N I +YS+CG I A+
Sbjct: 500 VTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQ 559
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
++F ++ + +VSWN++I G++ +G +A + F+ M +G KPD +S+ L+ CSH+G
Sbjct: 560 KLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSG 619
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
L+++G YFD+M +++ +SP +EH+ C+VDL RAG L +A ++++ MPMKP V G+L
Sbjct: 620 LVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGAL 679
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
L+AC+ G+ LAE K++ +LD +Y+LLA +Y+ GK D + ++R+ M+ +GI+
Sbjct: 680 LSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIK 739
Query: 451 KKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV-PETVAGELYEND 509
K PG S +E+ + +H F A D SH + I + ++ L + GYV E+ E++ ++
Sbjct: 740 KNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVRTESPRSEIHHSE 799
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 170/368 (46%), Gaps = 22/368 (5%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTN-PNHITFITLLSGCADFPSQCLFLGAMIHG 106
W + +S + ++ R + F M G + PN TF ++ C C L + G
Sbjct: 105 WNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALG--CRELAPQLLG 162
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
L K + V TAL+DM+ + G +D A+ +F + + F N+M+ GY + I+
Sbjct: 163 LFWKFDF-WGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGID 221
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A+ F++M RD +SW ++ + G EAL EM GV D T S L ACA
Sbjct: 222 HAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACA 281
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ +LG G +H V++ + + V + LI+LY++CG + A++VF + R VSW
Sbjct: 282 RLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTV 341
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KK 344
+I G +++E FN M+ E D + ++ C D+ ++
Sbjct: 342 LIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC---------FNRMDLCLGRQ 392
Query: 345 IYRVSPRIEHYGCIV------DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
++ + + H IV LY++ G L++A V +M + + V S++ A G
Sbjct: 393 LHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER-DIVSWTSMITAYSQIG 451
Query: 399 DIILAERL 406
+II A
Sbjct: 452 NIIKAREF 459
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 162/351 (46%), Gaps = 48/351 (13%)
Query: 91 ADFPSQCLFLGAM-----IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDA-M 144
AD C GA+ +HG + +GL + V + LL Y G + A + A +
Sbjct: 8 ADALRSCGSRGALAGARALHGRLVTVGL-ASAVFLQNTLLHAYLSCGALSDARRLLRADI 66
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFR 204
+ + T N M++GY ++G + A +FD MP RD SW L++G+ + F + LE F
Sbjct: 67 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126
Query: 205 EMQISGVE-PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
M SG P+ T V+ +C +G + + K DF + V L+D++ RC
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 264 GCIEFARQVFQR-------------------------------MHKRTLVSWNSIIVGFA 292
G ++FA ++F + M +R +VSWN +I +
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
+G V EAL M ++G + D ++T +LTAC+ + G + + K+ R P+I
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQ---LHAKVIRSLPQI 303
Query: 353 EHY--GCIVDLYSRAGRLEDALNVVENMPMKPN----EVVLGSLLAACRTK 397
+ Y +++LY++ G ++A V ++ + + ++ GSL C +K
Sbjct: 304 DPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSK 354
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 141/306 (46%), Gaps = 38/306 (12%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W I+ +SGR+ EA M G + T+ + L+ CA S L G +
Sbjct: 235 VVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFS--LGWGKQL 292
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V + L + + V +AL+++YAK G
Sbjct: 293 HAKVIR-SLPQIDPYVASALIELYAKCG-------------------------------S 320
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A R+F+ + R+++SWT L+ G ++ F +++E F +M+ + D + ++++
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C N L +G +H LK + V N+LI LY++CG ++ A VF M +R +VSW
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
S+I ++ G + +A E+F+ M + +++ L A G EDGL+ + M
Sbjct: 441 TSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLS 496
Query: 345 IYRVSP 350
V+P
Sbjct: 497 QKDVTP 502
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 81/210 (38%), Gaps = 37/210 (17%)
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR------ 270
+ L +C + G L +H ++ V + NTL+ Y CG + AR
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 271 --------------------------QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
++F RM +R + SWN+++ G+ + LE F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 305 NSMQKEGFK-PDGVSFTGALTACSHAGLIEDGLRYFDIMKKI-YRVSPRIEHYGCIVDLY 362
SM + G P+ +F + +C G E + + K + P +E +VD++
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVDMF 183
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
R G ++ A + + +P S+LA
Sbjct: 184 VRCGYVDFASRLFSQIE-RPTIFCRNSMLA 212
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 239/420 (56%), Gaps = 4/420 (0%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
PN T +L C++ + + GA + V KLG ++ V V AL+ +Y R++ A
Sbjct: 131 PNKHTLTFVLQACSN--AFAIREGAQVQTHVIKLGFVKD-VFVRNALIHLYCTCCRVESA 187
Query: 138 TVVFDAM-RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
VFD + + +WN+MI G++R G I A ++F EMP +D ISW +++G V+ G
Sbjct: 188 KQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFVEMPEKDVISWGTIISGCVQNGEL 247
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
E+AL+ F+E+ + P+ ++S+L A A +GTL G IH F + L
Sbjct: 248 EKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMTASLGTAL 307
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
+D+Y++CGCI+ +R +F RM ++ SWN +I G A +G EAL F +GF P
Sbjct: 308 VDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQGFHPVN 367
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
V+F G LTACS AGL+ +G +F +M Y + P +EHYGC+VDL SRAG + DA+ ++
Sbjct: 368 VTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMIN 427
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDG 436
MP P+ V+ S+L +C+ G I L E + L+ +DP + +YV LA ++A + KW+
Sbjct: 428 RMPAPPDPVLWASVLGSCQVHGFIELGEEIGNKLIQMDPTHNGHYVQLARIFARLRKWED 487
Query: 437 AGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGY 496
K+RR M R K G S IE +H F+AGD+ H + IY MLE++ + GY
Sbjct: 488 VSKVRRLMAERNSNKIAGWSLIEAEGRVHRFVAGDKEHERTTEIYKMLEIMGVRIAAAGY 547
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 135/354 (38%), Gaps = 78/354 (22%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W + IS ++G + +A F + PN ++LL+ A + L G I
Sbjct: 231 VISWGTIISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGT--LEYGKRI 288
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + L +GTAL+DMYAK G +D + +FD M K ++WN MI
Sbjct: 289 HSIANSLRFPM-TASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMI-------- 339
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
G G +EAL F + G P VT I VL A
Sbjct: 340 -----------------------CGLATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTA 376
Query: 225 CANVGTLGIGLWIHRYVLKQD---FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
C+ G + G H + L D + ++ ++DL SR
Sbjct: 377 CSRAGLVSEGK--HFFKLMTDTYGIEPEMEHYGCMVDLLSRA------------------ 416
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
GFV +A+E N M PD V + L +C G IE G +I
Sbjct: 417 -------------GFVYDAVEMINRMPA---PPDPVLWASVLGSCQVHGFIELGE---EI 457
Query: 342 MKKIYRVSPRIE-HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG-SLLAA 393
K+ ++ P HY + +++R + ED V M + + + G SL+ A
Sbjct: 458 GNKLIQMDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIEA 511
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 165/434 (38%), Positives = 253/434 (58%), Gaps = 37/434 (8%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +HG V K L + VG +++ MY FG ++LA VFD M + +WN+MI GY+
Sbjct: 128 GRQVHGQVLKTHL-WFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYL 186
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE----------------------- 197
+ G+IE A +FDEMP RD +S A+++G+ K G E
Sbjct: 187 KAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWTSMISA 246
Query: 198 --------EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK-D 248
+AL+ FREM G+ PD I+SVL+A A++G + G W+H YV +
Sbjct: 247 YVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELS 306
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
+ + + LID+YS+CG IE A VF+ + H+R + WNS+I G A++G EAL+ F M
Sbjct: 307 SGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEM 366
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
++ +P+ ++F G L+ CSH GL+E+G YF+ M + Y++ PRI+HYGC++DL+ RAGR
Sbjct: 367 ERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGR 426
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
LEDAL V++NMP + + + ++L+A G I + + ++L P S+YVLL+N+
Sbjct: 427 LEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNI 486
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDR--SHIESEHIYSMLE 485
YA G+WD KIR M+ RG++K G SS+ + +HEF+ G S + + + E
Sbjct: 487 YAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVBGKVHEFLXGKELDSSYSGQVLAKIAE 546
Query: 486 LLSFDLKLCGYVPE 499
++S LKL GY P+
Sbjct: 547 VVS-RLKLQGYEPD 559
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 158/384 (41%), Gaps = 54/384 (14%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG--TALLDMY 128
MT TNP +++L C S C IH + K L + V A +
Sbjct: 1 MTAISTNP----VVSVLDKCK---SLCEL--RQIHAQMIKTNLLNHQFTVSRLIAFCSLS 51
Query: 129 AKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLN 188
G +D A+ VF ++ +SF + A+I G+ + PV I + +L+
Sbjct: 52 GVSGGLDYASSVFSRIQHPNSFIFFALIKGFSDTSN-----------PVESLILYARMLS 100
Query: 189 GFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD 248
C SGVE +I SVL AC + G +H VLK
Sbjct: 101 -------------CLNYS--SGVE---FSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWF 142
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
+ V N+++ +Y G IE AR+VF RM R +VSWNS+I G+ G + A E F+ M
Sbjct: 143 DPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEMP 202
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
+ D VS + G E + F+ M V+ + ++ Y +
Sbjct: 203 ER----DLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVT-----WTSMISAYVQNRCP 253
Query: 369 EDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV--L 423
AL++ M ++P+ + S+L+A G + + L Y+ + S ++
Sbjct: 254 MKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSA 313
Query: 424 LANMYAAVGKWDGAGKIRRTMKGR 447
L +MY+ G + A + R++ R
Sbjct: 314 LIDMYSKCGYIENAYHVFRSISHR 337
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 164/480 (34%), Positives = 274/480 (57%), Gaps = 12/480 (2%)
Query: 32 SIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA 91
S+Q NS V WT I + +++ F +M + TL+SGC
Sbjct: 320 SLQDRNS-------VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC- 371
Query: 92 DFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT 151
F L LG +H L K G +R ++V +L+ +YAK G + A VF +M + +
Sbjct: 372 -FNRMDLCLGRQLHSLCLKSGHNRA-IVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVS 429
Query: 152 WNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISG 210
W +MI Y + G+I A FD M R+AI+W A+L +++ G E+ L+ + M
Sbjct: 430 WTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKD 489
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
V PD+VT +++ CA++G +G I + +K NV V N I +YS+CG I A+
Sbjct: 490 VTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQ 549
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
++F ++ + +VSWN++I G++ +G +A + F+ M +G KPD +S+ L+ CSH+G
Sbjct: 550 KLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSG 609
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
L+++G YFD+M +++ +SP +EH+ C+VDL RAG L +A ++++ MPMKP V G+L
Sbjct: 610 LVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGAL 669
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
L+AC+ G+ LAE K++ +LD +Y+LLA +Y+ GK D + ++R+ M+ +GI+
Sbjct: 670 LSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIK 729
Query: 451 KKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV-PETVAGELYEND 509
K PG S +E+ + +H F A D SH + I + ++ L + GYV E+ E++ ++
Sbjct: 730 KNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVRTESPRSEIHHSE 789
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 143/295 (48%), Gaps = 18/295 (6%)
Query: 120 VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD 179
V TAL+DM+ + G +D A+ +F + + F N+M+ GY + I+ A+ F++M RD
Sbjct: 165 VETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERD 224
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHR 239
+SW ++ + G EAL EM GV D T S L ACA + +LG G +H
Sbjct: 225 VVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHA 284
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
V++ + + V + LI+LY++CG + A++VF + R VSW +I G +
Sbjct: 285 KVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSK 344
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--KKIYRVSPRIEHYGC 357
++E FN M+ E D + ++ C D+ ++++ + + H
Sbjct: 345 SVELFNQMRAELMAIDQFALATLISGC---------FNRMDLCLGRQLHSLCLKSGHNRA 395
Query: 358 IV------DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
IV LY++ G L++A V +M + + V S++ A G+II A
Sbjct: 396 IVVSNSLISLYAKCGDLQNAEFVFSSMSER-DIVSWTSMITAYSQIGNIIKAREF 449
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 141/306 (46%), Gaps = 38/306 (12%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W I+ +SGR+ EA M G + T+ + L+ CA S L G +
Sbjct: 225 VVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFS--LGWGKQL 282
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V + L + + V +AL+++YAK G
Sbjct: 283 HAKVIR-SLPQIDPYVASALIELYAKCG-------------------------------S 310
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A R+F+ + R+++SWT L+ G ++ F +++E F +M+ + D + ++++
Sbjct: 311 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 370
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C N L +G +H LK + V N+LI LY++CG ++ A VF M +R +VSW
Sbjct: 371 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 430
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
S+I ++ G + +A E+F+ M + +++ L A G EDGL+ + M
Sbjct: 431 TSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLS 486
Query: 345 IYRVSP 350
V+P
Sbjct: 487 QKDVTP 492
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 147/350 (42%), Gaps = 72/350 (20%)
Query: 91 ADFPSQCLFLGAM-----IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDA-M 144
AD C GA+ +HG + +GL + V + LL Y G + A + A +
Sbjct: 24 ADALRSCGSRGALAGARALHGRLVTVGL-ASAVFLQNTLLHAYLSCGALSDARRLLRADI 82
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFR 204
+ + T N M++GY ++G + A +FD MP RD SW L++
Sbjct: 83 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMS---------------- 126
Query: 205 EMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
D +C +G + + K DF + V L+D++ RCG
Sbjct: 127 ---------DTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCG 177
Query: 265 CIEFARQVFQR-------------------------------MHKRTLVSWNSIIVGFAV 293
++FA ++F + M +R +VSWN +I +
Sbjct: 178 YVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQ 237
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE 353
+G V EAL M ++G + D ++T +LTAC+ + G + + K+ R P+I+
Sbjct: 238 SGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQ---LHAKVIRSLPQID 294
Query: 354 HY--GCIVDLYSRAGRLEDALNVVENMPMKPN----EVVLGSLLAACRTK 397
Y +++LY++ G ++A V ++ + + ++ GSL C +K
Sbjct: 295 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSK 344
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 13/190 (6%)
Query: 213 PDYVT--IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
P VT + L +C + G L +H ++ V + NTL+ Y CG + AR
Sbjct: 16 PHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDAR 75
Query: 271 QVFQR-MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG------FKPDGVSFTGAL 323
++ + + + +++ N ++ G+A G + +A E F+ M + D G+
Sbjct: 76 RLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSW 135
Query: 324 TACSHAGLIEDGLRYFDIMKKI-YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP 382
+C G E + + K + P +E +VD++ R G ++ A + + +P
Sbjct: 136 MSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVDMFVRCGYVDFASRLFSQIE-RP 192
Query: 383 NEVVLGSLLA 392
S+LA
Sbjct: 193 TIFCRNSMLA 202
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 160/453 (35%), Positives = 256/453 (56%), Gaps = 4/453 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT I+ + G E+ F +M + TL+SGC CL G +H
Sbjct: 337 VAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCL--GRQLH 394
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L K G V+V +L+ MYAK + A +F M K +W +MI + + G+I
Sbjct: 395 SLCLKSG-QIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNI 453
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNA 224
A FD M ++ I+W A+L +++ G E+ L + M V PD+VT +++
Sbjct: 454 AKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKG 513
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G +G I +K + V N +I +YS+CG I AR+VF ++ + +VSW
Sbjct: 514 CADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSW 573
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G++ +G +A+E F+ + K G KPD +S+ L+ CSH+GL+++G YFD+MK+
Sbjct: 574 NAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKR 633
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
++ +SP +EH+ C+VDL RAG L +A ++++ MPMKP V G+LL+AC+ G+ LAE
Sbjct: 634 VHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAE 693
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
K++ +LD +Y+L+A +YA GK D + +IR+ M+ +GI+K PG S +E+ + +
Sbjct: 694 LAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKV 753
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV 497
H F A D SH + I L+ L + GYV
Sbjct: 754 HVFKADDVSHPQVIAIRKKLDELMEKIARLGYV 786
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 148/280 (52%), Gaps = 4/280 (1%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHG-TNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
W + +S + +S + + F M G ++PN TF + C + L L + G
Sbjct: 105 WNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLL--G 162
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
+V K G +++ V AL+DM+ + G +DLA+ +F ++ + F N+M+ GY++ ++
Sbjct: 163 MVQKFG-SQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVD 221
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A+ +FD MP RD +SW +++ + G EAL+ +MQ GV D T S L ACA
Sbjct: 222 HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 281
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ +L G +H V++ + V + L++LY++CGC + A+ VF +H R V+W
Sbjct: 282 RLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTV 341
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC 326
+I GF +G E++E FN M+ E D + ++ C
Sbjct: 342 LIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGC 381
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 161/349 (46%), Gaps = 44/349 (12%)
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRM-DLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
HG + +GL + V + LL Y G + D ++ + + T N M++GY++ G
Sbjct: 27 HGRLVAVGL-ASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLG 85
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVL 222
+ AV +F MP RD SW L++G+ + + +LE F M SG P+ T +
Sbjct: 86 RLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAM 145
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR------- 275
+C +G + L + V K +D+ V L+D++ RCG ++ A ++F R
Sbjct: 146 KSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIF 205
Query: 276 ------------------------MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
M +R +VSWN ++ + +G V EAL+ MQ +G
Sbjct: 206 CRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG 265
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLE 369
+ D ++T +LTAC+ + G + + ++ R P I+ Y +V+LY++ G +
Sbjct: 266 VRLDSTTYTSSLTACARLSSLRWGKQ---LHAQVIRNLPCIDPYVASALVELYAKCGCFK 322
Query: 370 DALNVVENMPMKPN----EVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
+A V ++ + N ++ G L C T+ + L ++ L+ LD
Sbjct: 323 EAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTES-VELFNQMRAELMTLD 370
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 142/306 (46%), Gaps = 38/306 (12%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W +S +SGR+ EA M G + T+ + L+ CA S L G +
Sbjct: 235 VVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS--LRWGKQL 292
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V + L + V +AL+++YAK G A VF N++ D
Sbjct: 293 HAQVIR-NLPCIDPYVASALVELYAKCGCFKEAKGVF-----------NSLHD------- 333
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
R+ ++WT L+ GF++ G F E++E F +M+ + D + ++++
Sbjct: 334 -------------RNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISG 380
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C + L +G +H LK V V N+LI +Y++C ++ A +F+ M+++ +VSW
Sbjct: 381 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSW 440
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
S+I + G + +A E+F+ M + +++ L A G EDGLR +++M
Sbjct: 441 TSMITAHSQVGNIAKAREFFDGMSTKNV----ITWNAMLGAYIQHGAEEDGLRMYNVMLS 496
Query: 345 IYRVSP 350
V P
Sbjct: 497 EKDVRP 502
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 165/455 (36%), Positives = 252/455 (55%), Gaps = 34/455 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
++ WT+ I+ ++G EA +F M + G + TF ++L+ C F + L G I
Sbjct: 235 SISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLA--LDEGKQI 292
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + + ++N+ VG+ALLDMY K + A V
Sbjct: 293 HAYIIRTDY-QDNIFVGSALLDMYCKCRNVKYAEAV------------------------ 327
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
F +M ++ ISWTA+L G+ + GY EEA+ F +MQ + + PD T+ SV+++
Sbjct: 328 -------FRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISS 380
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CAN+ +L G H L V V N LI LY +CG +E A Q+F M R VSW
Sbjct: 381 CANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSW 440
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+++ G+A G E + F +M G PDGV+F G L+ACS AGL+E G YF+ M K
Sbjct: 441 TALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVK 500
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+R++P +HY C++DL SRAGRLE+A N + MP P+ + +LL++CR G++ + +
Sbjct: 501 EHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGK 560
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ L L+P ++Y+LL+++YAA GKWD K+R+ M+ G++K+PG S I+ + +
Sbjct: 561 WAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKV 620
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
H F A DRS S+ IY+ LE L + GYVP+
Sbjct: 621 HIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPD 655
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 193/355 (54%), Gaps = 16/355 (4%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLL-----SGCADFPSQCL 98
V W S +S + +G I+E+ + M G+ N N ITF T+L G D
Sbjct: 102 VVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVD------ 155
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
LG IHG + K G ++ + VG+ L+DMYAK G ++ A +F+ + K+ +N MI G
Sbjct: 156 -LGRQIHGQIFKFGY-QSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITG 213
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+R I A ++FD MP +D+ISWT ++ G + G F+EA++ F+EM I G D T
Sbjct: 214 LLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTF 273
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
SVL AC L G IH Y+++ D++DN+ V + L+D+Y +C +++A VF++M
Sbjct: 274 GSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRH 333
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ ++SW +++VG+ NG+ EA+ F MQ+ PD + +++C++ +E+G +
Sbjct: 334 KNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQ- 392
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
F + + ++ LY + G LE A + M ++ +EV +L++
Sbjct: 393 FHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIR-DEVSWTALVSG 446
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 139/320 (43%), Gaps = 47/320 (14%)
Query: 102 AMIHGLVCKL--GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
A + L C++ L + L++ Y K G + A VFD + + F+WN ++ Y
Sbjct: 22 AQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAY 81
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTI 218
+ G ++ R+FD MP D +SW +LL+G+ G E++ + M G V + +T
Sbjct: 82 SKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITF 141
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS----------------- 261
++L +N G + +G IH + K ++ + V + L+D+Y+
Sbjct: 142 STMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPE 201
Query: 262 --------------RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
RC I A Q+F M ++ +SW +II G NG EA++ F M
Sbjct: 202 KNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEM 261
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY------GCIVDL 361
EGF D +F LTAC G D K+I+ R ++ ++D+
Sbjct: 262 GIEGFCMDQFTFGSVLTACG-------GFLALDEGKQIHAYIIRTDYQDNIFVGSALLDM 314
Query: 362 YSRAGRLEDALNVVENMPMK 381
Y + ++ A V M K
Sbjct: 315 YCKCRNVKYAEAVFRKMRHK 334
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 79/179 (44%), Gaps = 10/179 (5%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
+ V WT+ +S + + G+ E F M HG P+ +TF+ +LS C S+ +
Sbjct: 434 IRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSAC----SRAGLVE 489
Query: 102 AMIHGLVCKLGLDRNNVMVG--TALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDG 158
H C + R + T ++D+ ++ GR++ A + M + W ++
Sbjct: 490 KGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSS 549
Query: 159 YMRRGDIES---AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
G++E A ++ ++ S+ L + + +G +++ + + M+ GV+ +
Sbjct: 550 CRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKE 608
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 179/464 (38%), Positives = 253/464 (54%), Gaps = 40/464 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I+ + + G EA F +M L G+ PN +T ++LLSGCA +
Sbjct: 351 VVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHC 410
Query: 105 HGLVCKLGLDRNN----VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
H + L LD N+ +MV AL+DMY+K KS
Sbjct: 411 HAIKWILNLDENDPGDDLMVINALIDMYSK---------------CKSP----------- 444
Query: 161 RRGDIESAVRMFDEMPVRD--AISWTALLNGFVKRGYFEEALECFREMQISG--VEPDYV 216
++A MFD +P +D ++WT L+ G + G EALE F +M V P+
Sbjct: 445 -----KAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAF 499
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK-VCNTLIDLYSRCGCIEFARQVFQR 275
TI L ACA +G L G IH YVL+ F+ + V N LID+YS+ G ++ AR VF
Sbjct: 500 TISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDN 559
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
MH+R VSW S++ G+ ++G EAL+ F MQK PDGV+F L ACSH+G+++ G
Sbjct: 560 MHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQG 619
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
+ YF+ M K + V P EHY C+VDL SRAGRL++A+ ++ MPMKP V +LL+ACR
Sbjct: 620 INYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACR 679
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
++ L E L++L+ G D +Y LL+N+YA W +IR MK GI+K+PG
Sbjct: 680 VYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGC 739
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
S ++ G F AGD SH S+ IY +L L +K GYVP+
Sbjct: 740 SWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPD 783
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 200/366 (54%), Gaps = 20/366 (5%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFL 100
V V W S ++ + + G A F RMT G P+ ++ + +L CA +
Sbjct: 211 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSR-- 268
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +HG + GL +V VG A++DMYAK G M+ A VF+ M+VK +WNAM+ GY
Sbjct: 269 GKQVHGYALRSGL-FEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYS 327
Query: 161 RRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
+ G + A+ +F+++ + ++W+A++ G+ +RG EAL+ FR+M + G EP+ V
Sbjct: 328 QIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVV 387
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLK-------QDFKDNVKVCNTLIDLYSRCGCIEFA 269
T++S+L+ CA+ GTL G H + +K D D++ V N LID+YS+C + A
Sbjct: 388 TLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAA 447
Query: 270 RQVFQRM--HKRTLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGF-KPDGVSFTGALTA 325
R +F + R++V+W +I G A +G EALE F+ M Q + F P+ + + AL A
Sbjct: 448 RAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMA 507
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
C+ G + G + + + S + C++D+YS++G ++ A V +NM + N V
Sbjct: 508 CARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQR-NGV 566
Query: 386 VLGSLL 391
SL+
Sbjct: 567 SWTSLM 572
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 200/441 (45%), Gaps = 93/441 (21%)
Query: 15 LPHQQNPNQNLTTTPQISIQ---TNNSKST-------VNPTVQ----WTSSISRHCRSGR 60
L HQQ Q L P I T NS + ++P+ W I R G
Sbjct: 66 LTHQQLLVQGLPHDPTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGF 125
Query: 61 IAEAALEFTRMTLHGTNPNHITFITLLSGCADFPS-QCLFLGAMIHGLVCKLGLDRNNVM 119
+ + + RM G P+H TF +L C + PS +C GA +H +V G + NV
Sbjct: 126 LEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRC---GASVHAVVFASGFEW-NVF 181
Query: 120 VGTALLDMYAKFGRMDLATVVFDAMR---VKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
VG L+ MY + G + A VFD MR V +WN+++ YM+ GD A++MF+ M
Sbjct: 182 VGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERM- 240
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
E L G+ PD V++++VL ACA+VG G
Sbjct: 241 --------------------TEDL---------GIRPDAVSLVNVLPACASVGAWSRGKQ 271
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H Y L+ ++V V N ++D+Y++CG +E A +VF+RM + +VSWN+++ G++ G
Sbjct: 272 VHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGR 331
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG 356
+AL F +++E + + V+++ + + GL G D+ +++
Sbjct: 332 FDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGL---GFEALDVFRQMLLCGS------ 382
Query: 357 CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL----MKYLVD 412
+PN V L SLL+ C + G ++ + +K++++
Sbjct: 383 ------------------------EPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILN 418
Query: 413 L---DPGVDSNYV-LLANMYA 429
L DPG D + L +MY+
Sbjct: 419 LDENDPGDDLMVINALIDMYS 439
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 111/263 (42%), Gaps = 41/263 (15%)
Query: 256 LIDLYSRCGCIEFARQVFQRMH--KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
+I +Y A V +R+H T+ WN +I GF+ + L+ + MQ+ G++
Sbjct: 83 IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 142
Query: 314 PDGVSFTGALTACS-----------HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
PD +F L AC HA + G + + +V +Y
Sbjct: 143 PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGN------------GLVSMY 190
Query: 363 SRAGRLEDALNVVENMPMK--PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
R G E+A V + M + + V S++AA GD I A ++ + + + D G+ +
Sbjct: 191 GRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTE-DLGIRPD 249
Query: 421 YVLLANMY---AAVGKWDGAGKIRRTMKGRGIQKKPGL-SSIEIGSGIHEFMAGDRSHIE 476
V L N+ A+VG W R + G + GL + +G+ + + A E
Sbjct: 250 AVSLVNVLPACASVGAWS------RGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEE 303
Query: 477 SEHIYSML---ELLSFDLKLCGY 496
+ ++ + +++S++ + GY
Sbjct: 304 ANKVFERMKVKDVVSWNAMVTGY 326
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 159/430 (36%), Positives = 241/430 (56%), Gaps = 36/430 (8%)
Query: 58 SGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRN- 116
S R ++ + M G P++ TF L+ + P+ LG +H V K GLDR+
Sbjct: 87 SSRTLDSVTFYVCMLHAGHFPDNFTFPFLIKSSSASPTS--LLGHQLHAHVVKFGLDRDV 144
Query: 117 ------------------------------NVMVGTALLDMYAKFGRMDLATVVFDAMRV 146
+V+ T L+ ++ G++D A +FD M +
Sbjct: 145 FVVNNMIALYSSFRELRSARKVFDESYSLVDVVSWTTLITGFSNSGQIDEARKIFDLMPL 204
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
K++ +WNAMI GY I A ++FDEMP RDA SW+A+++G+ + G EAL+ F EM
Sbjct: 205 KNTVSWNAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQLGMCNEALDLFMEM 264
Query: 207 QISGVE--PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
++G + P+ ++S ++ACA + L G W+H Y+ ++ + NV + L+D+Y +CG
Sbjct: 265 -VTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIKEKKLRINVTLGTVLLDMYGKCG 323
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
I A VF M +R + SWNS+I G A+NG EAL F MQ G P+ ++F LT
Sbjct: 324 SILDAAGVFNLMSERNVNSWNSMIAGLALNGCGKEALALFWKMQFVGPSPNAITFIALLT 383
Query: 325 ACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNE 384
CSH+GLI +G F +M ++Y + P+++HYGC+VDL RAG +++AL+ VE MPMKP+
Sbjct: 384 GCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEALDFVEKMPMKPHS 443
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
+ G+L+ ACR G + L E L K L+DL+P Y LL N++AA +WD +R
Sbjct: 444 ELWGALVGACRIHGQVELGEELGKRLIDLEPHHGGRYALLCNIFAAAQRWDDVAMVRDLE 503
Query: 445 KGRGIQKKPG 454
KGR + K PG
Sbjct: 504 KGRKVLKNPG 513
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 12/238 (5%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
W++ +S + + G EA F M T PN ++ +S CA + L G
Sbjct: 238 AASWSAMVSGYSQLGMCNEALDLFMEMVTGDKMIPNEAALVSAVSACAQL--RALEEGRW 295
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H + + L R NV +GT LLDMY K G + A VF+ M ++ +WN+MI G G
Sbjct: 296 LHSYIKEKKL-RINVTLGTVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSMIAGLALNG 354
Query: 164 DIESAVRMFDEM----PVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTI 218
+ A+ +F +M P +AI++ ALL G G E F M Q+ G++P
Sbjct: 355 CGKEALALFWKMQFVGPSPNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHY 414
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+++ G + L +V K K + ++ L+ G +E ++ +R+
Sbjct: 415 GCMVDLLGRAGLVKEAL---DFVEKMPMKPHSELWGALVGACRIHGQVELGEELGKRL 469
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 255/464 (54%), Gaps = 36/464 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + + + ++ +A + +MT G +P+ T +LL C+ S L G IHG
Sbjct: 376 WNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS--LHYGEEIHGF 433
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ GL + +G +LL +Y G+ A V+FD M +S
Sbjct: 434 ALRNGLAVDP-FIGISLLSLYICCGKPFAAQVLFDGMEHRS------------------- 473
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+SW ++ G+ + G +EA+ FR+M G++P + I+ V AC+
Sbjct: 474 ------------LVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQ 521
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ L +G +H + LK +++ V +++ID+Y++ GCI ++++F R+ ++ + SWN I
Sbjct: 522 LSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVI 581
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+ ++G EALE F M + G KPD +FTG L ACSHAGL+EDGL YF+ M ++
Sbjct: 582 IAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHN 641
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ P++EHY C+VD+ RAGR++DAL ++E MP P+ + SLL++CR G++ L E++
Sbjct: 642 IEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVA 701
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
L++L+P NYVL++N++A GKWD ++R MK G+QK G S IE+G +H F
Sbjct: 702 NKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNF 761
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVPET--VAGELYEND 509
+ GD E E + L + GY P+T V +L E D
Sbjct: 762 LIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEED 805
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 189/409 (46%), Gaps = 45/409 (11%)
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+G +H +V N+ ++ T ++ MY+ G + +VFD +R K+ F WNA++ Y
Sbjct: 16 VGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAY 75
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
R E A+ +F E+ + ++ +PD T+
Sbjct: 76 TRNELFEDAMSIFSEL------------------------------ISVTEHKPDNFTLP 105
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
V+ ACA + LG+G IH K D +V V N LI +Y +CG +E A +VF+ M +R
Sbjct: 106 CVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPER 165
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSM--QKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
LVSWNSII GF+ NGF+ E+ F M +E F PD + L C+ IE G+
Sbjct: 166 NLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMA 225
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
+ K+ ++ + ++D+YS+ L +A ++ + K N V S++ +
Sbjct: 226 VHGLAVKL-GLNEELMVNNSLIDMYSKCRFLSEA-QLLFDKNDKKNIVSWNSMIGGYARE 283
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
D+ L++ + D + ++ + N+ + +++ + G + GL S
Sbjct: 284 EDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLE---RSELQSLKELHGYSWRHGLQS 340
Query: 458 IEIGSGIHEFMAGDR---SHIESEHIYSMLE---LLSFDLKLCGYVPET 500
E+ + + F+A + SE ++ +++ + S++ LCGY +
Sbjct: 341 NELVA--NAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNS 387
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 213/513 (41%), Gaps = 118/513 (23%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTN--PNHITFITLLSGCADFPSQCLFLGAM 103
V W S I +G + E+ F M + + P+ T +T+L CA + + G
Sbjct: 168 VSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAG--EEDIEKGMA 225
Query: 104 IHGLVCKLGL------------------------------DRNNVMVGTALLDMYAK--- 130
+HGL KLGL D+ N++ +++ YA+
Sbjct: 226 VHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREED 285
Query: 131 ----------------------FGRMDLATVVFDAMRVKS-----SFTW----------- 152
F +++ V + ++S ++W
Sbjct: 286 VCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVA 345
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
NA I Y R G + S+ R+FD M + SW ALL G+ + +AL+ + +M SG++
Sbjct: 346 NAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLD 405
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD+ TI S+L AC+ + +L G IH + L+ + + +L+ LY CG A+ +
Sbjct: 406 PDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVL 465
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F M R+LVSWN +I G++ NG EA+ F M +G +P ++ ACS +
Sbjct: 466 FDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSAL 525
Query: 333 EDG--LRYF----DIMKKIYRVSPRIEHY---GC---------------------IVDLY 362
G L F + + I+ S I+ Y GC I+ Y
Sbjct: 526 RLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGY 585
Query: 363 SRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKY------LVDL 413
GR ++AL + E M +KP++ +L AC G L E ++Y L ++
Sbjct: 586 GIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAG---LVEDGLEYFNQMLNLHNI 642
Query: 414 DPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKG 446
+P ++ +Y + +M G+ D A ++ M G
Sbjct: 643 EPKLE-HYTCVVDMLGRAGRIDDALRLIEEMPG 674
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 133/277 (48%), Gaps = 37/277 (13%)
Query: 47 QWTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
QW + +S + R+ +A F+ + ++ P++ T ++ CA L LG +IH
Sbjct: 67 QWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLD--LGLGQIIH 124
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G+ K+ L ++V VG AL+ MY K G +
Sbjct: 125 GMATKMDL-VSDVFVGNALIAMYGKC-------------------------------GLV 152
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI--SGVEPDYVTIISVLN 223
E AV++F+ MP R+ +SW +++ GF + G+ +E+ FREM + PD T+++VL
Sbjct: 153 EEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLP 212
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
CA + G+ +H +K + + V N+LID+YS+C + A+ +F + K+ +VS
Sbjct: 213 VCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVS 272
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT 320
WNS+I G+A V MQ E K FT
Sbjct: 273 WNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFT 309
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 160/457 (35%), Positives = 261/457 (57%), Gaps = 35/457 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W I+ + ++ EA F R+ G N ITF+ +L+ S L G +I
Sbjct: 272 VVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTS--LAKGKVI 329
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H LV + G DR+ V V TAL+ +Y GR +
Sbjct: 330 HELVKEAGYDRDAV-VATALMSLY---GRCEAPG-------------------------- 359
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A ++F +M +D I+WT + + + G+ +EAL+ F+EMQ+ G P T+++VL+
Sbjct: 360 --QAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDT 417
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++ L G IH ++++ F+ + V LI++Y +CG + A VF++M KR ++ W
Sbjct: 418 CAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVW 477
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
NS++ +A +G+ E L+ FN MQ +G K D VSF L+A SH+G + DG +YF M +
Sbjct: 478 NSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQ 537
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP-MKPNEVVLGSLLAACRTKGDIILA 403
+ ++P E YGC+VDL RAGR+++A+++V + P+ ++ +LL ACRT A
Sbjct: 538 DFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQA 597
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
+ + +++ DP YV+L+N+YAA G WDG ++R+ M+ RG++K+PG SSIEI +
Sbjct: 598 KAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNR 657
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+HEF+ GDRSH IY+ L++L+ +++ GY+P+T
Sbjct: 658 VHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDT 694
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 168/355 (47%), Gaps = 38/355 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ I+ + + A A + RM L G PN IT T+ + D L G +
Sbjct: 171 VVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGD--PNYLSEGKFV 228
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+GLV G+ ++V V + ++M+ G + GD
Sbjct: 229 YGLVSS-GVMESDVRVMNSAVNMFGNAGLL----------------------------GD 259
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A R+F++M RD ++W ++ +V+ F EA+ F +Q GV+ + +T + +LN
Sbjct: 260 ---ARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNV 316
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
++ +L G IH V + + + V L+ LY RC A ++F M + +++W
Sbjct: 317 YTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITW 376
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMK 343
+ V +A NGF EAL+ F MQ EG +P + L C+H ++ G + + I++
Sbjct: 377 TVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIE 436
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
+R+ +E ++++Y + G++ +A++V E M K + +V S+L A G
Sbjct: 437 NRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKMA-KRDILVWNSMLGAYAQHG 488
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 192/439 (43%), Gaps = 74/439 (16%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WT I +C+ G A F +M P +T++ +L+ CA ++ L G IHG
Sbjct: 73 WTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACA--STESLKDGMEIHGQ 130
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ + G + +V VGTAL++MY K G + RG +S
Sbjct: 131 ILQQGFE-GDVFVGTALINMYNKCGSV---------------------------RGAWDS 162
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
F + RD +SWTA++ V+ F A +R MQ+ GV P+ +T+ +V NA +
Sbjct: 163 ----FKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGD 218
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
L G +++ V + +V+V N+ ++++ G + AR++F+ M R +V+WN +
Sbjct: 219 PNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIV 278
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT------GALTACS----------HAGL 331
I + N GEA+ F +Q++G K + ++F +LT+ + AG
Sbjct: 279 ITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGY 338
Query: 332 IEDGLRYFDIMKKIYRVSPRIEHYGCIVDL--------------YSRAGRLEDALNVVEN 377
D + +M R + + VD+ Y++ G ++AL + +
Sbjct: 339 DRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQE 398
Query: 378 MPM---KPNEVVLGSLLAACRTKGDIILAERLMKYLVD----LDPGVDSNYVLLANMYAA 430
M + +P L ++L C + ++ ++++ ++ V++ L NMY
Sbjct: 399 MQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVET---ALINMYGK 455
Query: 431 VGKWDGAGKIRRTMKGRGI 449
GK A + M R I
Sbjct: 456 CGKMAEAMSVFEKMAKRDI 474
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 140/303 (46%), Gaps = 37/303 (12%)
Query: 77 NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL 136
P+ F+ LL C+ ++ + G +H V G ++NN++ G L+ MYA+ G +
Sbjct: 1 KPDTAFFVALLQRCS--SAKNVDHGRRVHWHVRDRGFEQNNLVCGH-LIQMYAQCGSVPE 57
Query: 137 ATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYF 196
A VF+ + K F W MI Y ++GD + A+ MF +M D
Sbjct: 58 AQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEED----------------- 100
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
V P VT +++LNACA+ +L G+ IH +L+Q F+ +V V L
Sbjct: 101 --------------VMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTAL 146
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
I++Y++CG + A F+R+ R +VSW ++I + A + MQ +G P+
Sbjct: 147 INMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNK 206
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKK-IYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
++ A + +G + ++ + R+ + V+++ AG L DA +
Sbjct: 207 ITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSA--VNMFGNAGLLGDARRLF 264
Query: 376 ENM 378
E+M
Sbjct: 265 EDM 267
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 112/222 (50%), Gaps = 6/222 (2%)
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
+PD +++L C++ + G +H +V + F+ N VC LI +Y++CG + A+Q
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
VF+ + ++ + +W +I + G AL F MQ+E P V++ L AC+
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 332 IEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
++DG+ + I+++ + + ++++Y++ G + A + + + + + V ++
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVG--TALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAM 177
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
+AAC LA L + + LD GV N + L ++ A G
Sbjct: 178 IAACVQHDQFALARWLYRRM-QLD-GVVPNKITLYTVFNAYG 217
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 156/424 (36%), Positives = 244/424 (57%), Gaps = 9/424 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W + I + + GR+ EA + M G PN + + L+S C + G +
Sbjct: 282 VISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGR--GTAIVDGWQL 339
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG V K G D N + T ++ YA G MDLA + F+ +WNA+ G+++ G
Sbjct: 340 HGTVVKRGFDCYN-FIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGM 398
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ A++ FD+M VRD SW+ +++G+ + + + ALE F +M G++P+ VT++SV +A
Sbjct: 399 MDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSA 458
Query: 225 CANVGTLGIGLWIHRYVLKQD--FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR--T 280
A +GTL G H Y+ + F DN++ LID+Y++CG I A Q F ++ +
Sbjct: 459 IATLGTLQEGKLAHEYMRSESIPFNDNLRA--ALIDMYAKCGSINSALQFFNQIRDEVSS 516
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+ WN+II G A +G LE F+ MQ+ KP+ ++F G L+AC HAGL+E G R F
Sbjct: 517 VSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFK 576
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
MK Y V P I+HYGC++D+ RAG LE+A ++ +MPM+ + V+ G+LLAACRT G++
Sbjct: 577 TMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACRTHGNV 636
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+ ER + L L P VLL+N+YA GKW+ +R M+G+ + ++PG S
Sbjct: 637 NIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSVMQGQTMDREPGYSGFVA 696
Query: 461 GSGI 464
GS +
Sbjct: 697 GSDL 700
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 184/365 (50%), Gaps = 55/365 (15%)
Query: 81 ITFITLLSGCAD--FPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLAT 138
+ ++ L C+ F SQ G IH L+ KLGL N + +L++MYAK G + A
Sbjct: 54 LALVSALKSCSSLSFISQ----GRQIHSLIFKLGL-HFNTFIQNSLINMYAKCGDIKNAQ 108
Query: 139 VVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE 198
++FD S + N M+ GY+R G I++A ++FD MP + +S+T ++ GFV+ G+F E
Sbjct: 109 LLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFRE 168
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
ALE F++M+ GV P+ +T+++V++AC+++G + +H V+K V V L+
Sbjct: 169 ALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMH 228
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
Y C + AR++F M +R LV+WN ++ G+A G V EA E F
Sbjct: 229 AYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELF-------------- 274
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
DG+ D++ +G ++D Y + GRL +AL + M
Sbjct: 275 ---------------DGICDKDVIS-----------WGTMIDGYIQKGRLREALEIYRAM 308
Query: 379 PMK---PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS-NYV--LLANMYAAVG 432
PNEV++ +L++AC I+ +L +V G D N++ + YAA G
Sbjct: 309 LQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVV--KRGFDCYNFIQTTIIYFYAACG 366
Query: 433 KWDGA 437
D A
Sbjct: 367 MMDLA 371
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 211/472 (44%), Gaps = 81/472 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V +T+ I ++G EA F M G PN +T + ++S C+ + M+H
Sbjct: 151 VSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGE--VLNCRMVH 208
Query: 106 GLVCKL---GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
GLV K+ GL V+V T L+ Y + A +FD M ++ TWN M++GY +
Sbjct: 209 GLVVKMFVVGL----VIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKT 264
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G ++ A +FD + +D ISW +++G++++G EALE +R M +G P+ V I++++
Sbjct: 265 GLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLV 324
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG-----CIEF--------- 268
+AC + G +H V+K+ F + T+I Y+ CG C++F
Sbjct: 325 SACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLE 384
Query: 269 -----------------ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
A + F +MH R + SW+++I G+A + ALE F+ M G
Sbjct: 385 SWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGG 444
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
KP+ V+ +A + G +++G + M+ + ++D+Y++ G + A
Sbjct: 445 IKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRS-ESIPFNDNLRAALIDMYAKCGSINSA 503
Query: 372 LNV------------------------------------VENMPMKPNEVVLGSLLAACR 395
L ++ +KPN + +L+AC
Sbjct: 504 LQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACC 563
Query: 396 TKGDIILAERL---MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
G + +R+ MK +++P + +Y + ++ G + A ++ R+M
Sbjct: 564 HAGLVESGKRIFKTMKSAYNVEPDI-KHYGCMIDILGRAGLLEEAEEMIRSM 614
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 113/263 (42%), Gaps = 38/263 (14%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
K V W++ IS + +S A F +M G PN +T +++ S A + L
Sbjct: 408 KMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGT--L 465
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR--VKSSFTWNAMI 156
G + H + + N+ + AL+DMYAK G ++ A F+ +R V S WNA+I
Sbjct: 466 QEGKLAHEYMRSESIPFNDNL-RAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAII 524
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
G G+ LE F +MQ ++P+ +
Sbjct: 525 -------------------------------CGLASHGHASMCLEVFSDMQRFHIKPNPI 553
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
T I VL+AC + G + G I + + + + ++K +ID+ R G +E A ++ +
Sbjct: 554 TFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRS 613
Query: 276 M-HKRTLVSWNSIIVGFAVNGFV 297
M + +V W +++ +G V
Sbjct: 614 MPMEADIVIWGTLLAACRTHGNV 636
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 245/422 (58%), Gaps = 3/422 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + + + E L +M P+ + T+LS C ++ L G IH
Sbjct: 60 VAWGVMLDSYFNTQNYRETLLLLNKMKRSRVVPDQVILATVLSTCGH--TRHLRSGKTIH 117
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ ++ + + +AL++MYA M++A ++ M+ K + AM+ GY + G I
Sbjct: 118 SYI-QVSDIFVDARLSSALINMYASCMDMEMADKIYSGMQRKDLVSSTAMVCGYAKNGKI 176
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E A +F+ M +D +SW+A+++ + + E L F +MQ GV PD +T++SV++AC
Sbjct: 177 EIARSIFNHMAEKDVVSWSAMISAYAENNQPSEVLNLFNKMQGCGVSPDEITMLSVISAC 236
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN+G+L WIH V F + +CN LID++S+CG + A +F M ++ +++W
Sbjct: 237 ANIGSLDKARWIHSIVGNHGFYKILSICNALIDMFSKCGSLTLALNMFNAMPRKNVITWT 296
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S+I FA++G AL F M+ EG +P+GV+F L AC HAGL+ +G F+ M +
Sbjct: 297 SMIAAFAMHGDGPSALTLFGQMKGEGVEPNGVTFLVLLYACCHAGLVYEGRSLFECMLQE 356
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
YR+ P+ EHYGC+VDL RA +++A++++E+M ++PN + GSLLAAC GDI L E
Sbjct: 357 YRIEPKHEHYGCMVDLMGRAKLMQEAVDLIESMHIRPNVAIWGSLLAACWMHGDIELGEF 416
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
K +++LDP D YVLL+N++A G W+ A K+R MK G+ K+ G S +E+ +H
Sbjct: 417 AAKKILELDPNHDGAYVLLSNIHAKSGNWNNAQKLRVMMKVHGVSKETGYSWLELNCTVH 476
Query: 466 EF 467
F
Sbjct: 477 GF 478
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 137/326 (42%), Gaps = 65/326 (19%)
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG+ ++G D + VGTAL+ YA R+ A VFD M + W M+D Y +
Sbjct: 16 HGIAVRVGADEDG-FVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQN 74
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ E L +M+ S V PD V + +VL+
Sbjct: 75 -------------------------------YRETLLLLNKMKRSRVVPDQVILATVLST 103
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC--------------------- 263
C + L G IH Y+ D + ++ + LI++Y+ C
Sbjct: 104 CGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASCMDMEMADKIYSGMQRKDLVSS 163
Query: 264 ----------GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
G IE AR +F M ++ +VSW+++I +A N E L FN MQ G
Sbjct: 164 TAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPSEVLNLFNKMQGCGVS 223
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
PD ++ ++AC++ G + D R+ + + + ++D++S+ G L ALN
Sbjct: 224 PDEITMLSVISACANIGSL-DKARWIHSIVGNHGFYKILSICNALIDMFSKCGSLTLALN 282
Query: 374 VVENMPMKPNEVVLGSLLAACRTKGD 399
+ MP K N + S++AA GD
Sbjct: 283 MFNAMPRK-NVITWTSMIAAFAMHGD 307
>gi|356518597|ref|XP_003527965.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g21470-like [Glycine max]
Length = 535
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 158/418 (37%), Positives = 248/418 (59%), Gaps = 19/418 (4%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA---DFPSQCLFLGA 102
V W + IS + R+G A L F +M +T+ ++ G A D +
Sbjct: 113 VTWNAMISGYLRNGDTESAYLVFEKMQ----GKTQVTWSQMIGGFARNGDIATARRLFDE 168
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+ H L NV+ T ++D YA+ G M+ A VF+ M ++ F W++MI GY ++
Sbjct: 169 VPHEL--------KNVVTWTVMVDGYARIGEMEAAREVFEMMPERNCFVWSSMIHGYFKK 220
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G++ A +FD +PVR+ W +++ G+V+ G+ E+AL F M G EPD T++SVL
Sbjct: 221 GNVTEAAAVFDWVPVRNLEIWNSMIAGYVQNGFGEKALLAFEGMGAEGFEPDEFTVVSVL 280
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+ACA +G L +G IH + + N V + L+D+Y++CG + AR VF+ ++ +
Sbjct: 281 SACAQLGHLDVGKQIHHMIEHKGIVVNPFVLSGLVDMYAKCGDLVNARLVFEGFTEKNIF 340
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
WN++I GFA+NG E LE+F M++ +PDG++F L+AC+H GL+ + L M
Sbjct: 341 CWNAMISGFAINGKCSEVLEFFGRMEESNIRPDGITFLTVLSACAHRGLVTEALEVISKM 400
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+ YR+ I+HYGC+VDL RAGRL+DA +++ MPMKPN+ VLG++L ACR D+ +
Sbjct: 401 EG-YRIEIGIKHYGCMVDLLGRAGRLKDAYDLIVRMPMKPNDTVLGAMLGACRIHSDMNM 459
Query: 403 AERLMKYLVDLDP--GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
AE++MK + + +P G S+ VLL+N+YAA KW+ A +++R G Q+ PG SSI
Sbjct: 460 AEQVMKLICE-EPVTGASSHNVLLSNIYAASEKWEKAERMKRITVDGGSQRIPGCSSI 516
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 168/348 (48%), Gaps = 30/348 (8%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
NP+ W SI H + G + A L + + G + + + L CA P L
Sbjct: 11 NPS-HWFCSIRNHIQQGSLRCALLAYKQTRHEGVYDSSVAPL-LFKACASLPF--LHYVK 66
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H K G ++V++GTALL Y+K G + A +FD M ++ TWNAMI GY+R
Sbjct: 67 ALHAESIKAG-SESDVIIGTALLTTYSKCGVVRDARNLFDTMPERNVVTWNAMISGYLRN 125
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD ESA +F++M + ++W+ ++ GF + G A F E + + VT ++
Sbjct: 126 GDTESAYLVFEKMQGKTQVTWSQMIGGFARNGDIATARRLFDE--VPHELKNVVTWTVMV 183
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+ A +G + R V + + N V +++I Y + G + A VF + R L
Sbjct: 184 DGYARIGEMEAA----REVFEMMPERNCFVWSSMIHGYFKKGNVTEAAAVFDWVPVRNLE 239
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
WNS+I G+ NGF +AL F M EGF+PD + L+AC+ G + D+
Sbjct: 240 IWNSMIAGYVQNGFGEKALLAFEGMGAEGFEPDEFTVVSVLSACAQLG-------HLDVG 292
Query: 343 KKIYRVSPRIEHYGCI---------VDLYSRAGRLEDALNVVENMPMK 381
K+I+ + IEH G + VD+Y++ G L +A V E K
Sbjct: 293 KQIHHM---IEHKGIVVNPFVLSGLVDMYAKCGDLVNARLVFEGFTEK 337
>gi|357464871|ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491765|gb|AES72968.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 554
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 221/355 (62%), Gaps = 4/355 (1%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F NA+I+ Y RG ++ AV++FDEM RD +SW+ L++ VK EAL F++MQ+
Sbjct: 113 FVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQMG 172
Query: 210 GVEP----DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
+ D ++SV++A +++G + +G+W+H ++++ V + LI++YSRCG
Sbjct: 173 HRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYSRCGL 232
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
I+ + +VF M +R +V+W ++I G AV+G EAL+ F M++ G KPDG F G L A
Sbjct: 233 IDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLVA 292
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
CSH GL+EDG R F+ M+ + + P +EHYGC+VDL RAG + +A + VE MP+KPN V
Sbjct: 293 CSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEMPLKPNSV 352
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+ +LL AC + LAE+ + +++LDP D +YVLL+N Y VG W G +R +MK
Sbjct: 353 IWRTLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNWGGKAGLRNSMK 412
Query: 446 GRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I K+PGLS + I +HEF++GD H + E I L + +KL GY P T
Sbjct: 413 QNRIVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFLASIIDTVKLGGYTPNT 467
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 122/295 (41%), Gaps = 74/295 (25%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLF-LGAM 103
V W++ IS ++ AEA F +M + H N + +LS + S + LG
Sbjct: 144 VSWSTLISCLVKNNLPAEALSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIW 203
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H + ++G+ V +GTAL++MY++ G +D + VFD M ++ TW A+I+G
Sbjct: 204 VHSFIVRMGIVMT-VPLGTALINMYSRCGLIDRSVKVFDEMPERNVVTWTALING----- 257
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
G EAL+ F EM+ SG++PD I VL
Sbjct: 258 --------------------------LAVHGRSREALKVFYEMKESGLKPDGALFIGVLV 291
Query: 224 ACANVGTLGIGLWIHRYVLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
AC++ G + G W ++ +F K ++ ++DL R G I
Sbjct: 292 ACSHGGLVEDG-WRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLI--------------- 335
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTAC---SHAGLIE 333
LE F+ +++ KP+ V + L AC +H GL E
Sbjct: 336 -------------------LEAFDFVEEMPLKPNSVIWRTLLGACVNHNHLGLAE 371
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 8/163 (4%)
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
+ K F N+ V N LI+ Y G ++ A ++F M +R +VSW+++I N EA
Sbjct: 103 IFKLGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEA 162
Query: 301 LEYFNSMQKEGFKP-----DGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
L F MQ G + D ++A S G+IE G+ + ++ V +
Sbjct: 163 LSVFQQMQM-GHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMT-VPLG 220
Query: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
++++YSR G ++ ++ V + MP + N V +L+ G
Sbjct: 221 TALINMYSRCGLIDRSVKVFDEMPER-NVVTWTALINGLAVHG 262
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 257/461 (55%), Gaps = 35/461 (7%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFI-TLLSGCADFPSQCLF 99
TV V W++ I R+ EA F M + G T + + L CA L
Sbjct: 266 TVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLAD--LR 323
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+G +H L+ K G+ ++ G +LL MYAK G
Sbjct: 324 MGTQLHALLAKSGI-HADLTAGNSLLSMYAKAGL-------------------------- 356
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
I A +FDE+ ++D IS+ ALL+G+V+ G EEA F++MQ V+PD T++
Sbjct: 357 -----INEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMV 411
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
S++ AC+++ L G H V+ + +CN+LID+Y++CG I+ +RQVF +M R
Sbjct: 412 SLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPAR 471
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+VSWN++I G+ ++G EA F SM+ +GF+PD V+F + ACSH+GL+ +G +F
Sbjct: 472 DIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWF 531
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
D M Y + PR+EHY C+VDL +R G L++A +++MP+K + V G+LL ACR +
Sbjct: 532 DTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKN 591
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
I L +++ + + L P N+VLL+N+++A G++D A ++R K +G +K PG S IE
Sbjct: 592 IDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIE 651
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I +H F+ GD+SH S IY L+ + D+K GY +T
Sbjct: 652 INGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADT 692
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 155/348 (44%), Gaps = 38/348 (10%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHG-TNPNHITFITLLSGCADFPSQ 96
+K + V W + ++ + G A M G PN T ++LL A +
Sbjct: 158 AKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGA- 216
Query: 97 CLFLGAMIHGLVCKLGLDRN--NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNA 154
LF G +H + LD+N V++GTALLDMYAK + V+
Sbjct: 217 -LFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHL-----VY------------- 257
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV-EP 213
A R+F M VR+ ++W+AL+ GFV EA F++M + G+
Sbjct: 258 -------------ACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFL 304
Query: 214 DYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVF 273
++ S L CA++ L +G +H + K ++ N+L+ +Y++ G I A +F
Sbjct: 305 SATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLF 364
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
+ + +S+ +++ G+ NG EA F MQ +PD + + ACSH ++
Sbjct: 365 DEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQ 424
Query: 334 DGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
G R I ++ ++D+Y++ GR++ + V + MP +
Sbjct: 425 HG-RCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPAR 471
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 126/266 (47%), Gaps = 10/266 (3%)
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
VK + W ++ ++ RG + A ++FD +P DA ++ AL+ + RG F A++ +R
Sbjct: 30 VKDNKEWQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRS 89
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
M V P+ T VL AC+ + L G IH + ++ V LIDLY RC
Sbjct: 90 MLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCAR 149
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ-KEGFKPDGVSFTGALT 324
A VF +M R +V+WN+++ G+A +G A+ + MQ + G +P+ + L
Sbjct: 150 FGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLP 209
Query: 325 ACSHAGLIEDGLRYFDIMKKIY--RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP 382
+ G + G + Y + ++ ++D+Y++ L A V M ++
Sbjct: 210 LLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVR- 268
Query: 383 NEVVLGSLLAACRTKGDIILAERLMK 408
NEV +L+ G +L +R+ +
Sbjct: 269 NEVTWSALI------GGFVLCDRMTE 288
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 144/335 (42%), Gaps = 40/335 (11%)
Query: 63 EAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG 121
AA++ R L+ PN TF +L C+ C G IH +GL ++ V
Sbjct: 81 HAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCA--GRTIHAHAAAVGL-HTDLFVS 137
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
TAL+D+Y + R A VF M ++ WNAM+ GY G A+ +M R
Sbjct: 138 TALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDR--- 194
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
G+ P+ T++S+L A G L G +H Y
Sbjct: 195 ---------------------------GGLRPNASTLVSLLPLLAQHGALFQGTSVHAYC 227
Query: 242 LKQDFKDN---VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
L+ N V + L+D+Y++C + +A +VF M R V+W+++I GF + +
Sbjct: 228 LRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMT 287
Query: 299 EALEYFNSMQKEGFK-PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC 357
EA F M EG S AL C+ + G + ++ K + +
Sbjct: 288 EAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAK-SGIHADLTAGNS 346
Query: 358 IVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
++ +Y++AG + +A + + + +K + + G+LL+
Sbjct: 347 LLSMYAKAGLINEATMLFDEIAIK-DTISYGALLS 380
>gi|125606358|gb|EAZ45394.1| hypothetical protein OsJ_30043 [Oryza sativa Japonica Group]
Length = 494
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 256/452 (56%), Gaps = 8/452 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + + H RSG + F +M + G + T L+ CA+ P G IH
Sbjct: 38 VAWNTLLMGHSRSGNAKQCLALFNQMWMSGLTCDDATLCILVDACAELPDPST--GFAIH 95
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+V + G + V +L+ Y KF +D A +F++M+ +++ +WN++ID + R G I
Sbjct: 96 KVVVQSGWN-GIPEVNNSLISFYTKFSLLDCAVQIFESMKTRTTASWNSLIDAHARFGYI 154
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNA 224
E A +F+ P + ISWTA++ GF + EAL F +M ++PD T +VL+A
Sbjct: 155 EQAALLFESAPETNIISWTAMIGGFARNSLTSEALAHFVKMLTQEYIQPDDFTFGAVLHA 214
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA+ L G +H + F + V N L+D+Y++CG +E A VF +H++ LVSW
Sbjct: 215 CASAPCLASGRMVHSCAFQGGFASYLYVANNLVDMYAKCGDVEGANNVFDAIHQKDLVSW 274
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+++ GFA+NG EALE + M PD V+FTG LTACSH+GL+E G +F+ M
Sbjct: 275 NTMLFGFAINGLPKEALEVYEIMTYHNVSPDEVTFTGLLTACSHSGLLEQGRAFFESMMS 334
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKG-DI 400
++ V P+ EH C++D+Y+R+G + A+ ++E P P + +LL+ C ++ D
Sbjct: 335 VHGVQPKPEHLSCVLDMYARSGNIAKAIEMMEQYPEIVKSPGSGLSEALLSFCSSENLDF 394
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+ ++ +V P D+ YV+L+N+ A G+WD A ++RR M +GI+K PG S IE+
Sbjct: 395 WVGRKVGDDVVARAPARDTGYVMLSNLLCASGRWDEAERVRRAMAEQGIKKSPGCSWIEV 454
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+ F++ +++ ++ +Y ++ LL ++++
Sbjct: 455 KGKVKVFVSSEQAIDLTDTVYGLIYLLDYEMR 486
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 33/270 (12%)
Query: 144 MRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF 203
M +++ +W +++ ++ G +E A +FDEMP + ++W LL G + G ++ L F
Sbjct: 1 MPERNALSWCSLLHAFVVSGHMELAHELFDEMPSKSNVAWNTLLMGHSRSGNAKQCLALF 60
Query: 204 REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
+M +SG+ D T+ +++ACA + G IH+ V++ + +V N+LI Y++
Sbjct: 61 NQMWMSGLTCDDATLCILVDACAELPDPSTGFAIHKVVVQSGWNGIPEVNNSLISFYTKF 120
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIV-------------------------------GFA 292
++ A Q+F+ M RT SWNS+I GFA
Sbjct: 121 SLLDCAVQIFESMKTRTTASWNSLIDAHARFGYIEQAALLFESAPETNIISWTAMIGGFA 180
Query: 293 VNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR 351
N EAL +F M +E +PD +F L AC+ A + G R +
Sbjct: 181 RNSLTSEALAHFVKMLTQEYIQPDDFTFGAVLHACASAPCLASG-RMVHSCAFQGGFASY 239
Query: 352 IEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ +VD+Y++ G +E A NV + + K
Sbjct: 240 LYVANNLVDMYAKCGDVEGANNVFDAIHQK 269
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 91/225 (40%), Gaps = 40/225 (17%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTR--------------------------------MT 72
T W S I H R G I +AAL F +T
Sbjct: 138 TASWNSLIDAHARFGYIEQAALLFESAPETNIISWTAMIGGFARNSLTSEALAHFVKMLT 197
Query: 73 LHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFG 132
P+ TF +L CA P CL G M+H + G + + V L+DMYAK G
Sbjct: 198 QEYIQPDDFTFGAVLHACASAP--CLASGRMVHSCAFQGGF-ASYLYVANNLVDMYAKCG 254
Query: 133 RMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR----DAISWTALLN 188
++ A VFDA+ K +WN M+ G+ G + A+ +++ M D +++T LL
Sbjct: 255 DVEGANNVFDAIHQKDLVSWNTMLFGFAINGLPKEALEVYEIMTYHNVSPDEVTFTGLLT 314
Query: 189 GFVKRGYFEEALECFRE-MQISGVEPDYVTIISVLNACANVGTLG 232
G E+ F M + GV+P + VL+ A G +
Sbjct: 315 ACSHSGLLEQGRAFFESMMSVHGVQPKPEHLSCVLDMYARSGNIA 359
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/437 (39%), Positives = 251/437 (57%), Gaps = 33/437 (7%)
Query: 77 NPNHITFITLLSGCA--DFPSQCL-FLGAMI----------HGLVCKLGLDRNNVMVGTA 123
NPN T+ T+ G A D PS L F MI + + K NV G A
Sbjct: 92 NPNVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISKSLNVREGEA 151
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
+ + + G F+++ F N+++ Y GD ESA +F+ M RD ++
Sbjct: 152 IHSVTIRNG--------FESL----VFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAX 199
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
+++NGF G EAL FREM GVEPD T++S+L+A A +G L +G +H Y+LK
Sbjct: 200 ISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLK 259
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
++N V N+L+DLY++C I +R VSW S+IVG AVNGF EALE
Sbjct: 260 VGLRENSHVTNSLLDLYAKCDAI--------WEXERNAVSWTSLIVGLAVNGFGEEALEL 311
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F M+ +G P ++F G L ACSH G++++G YF MK+ + + PRIEHYGC+VDL S
Sbjct: 312 FREMEGQGLVPSEITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLS 371
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
RAG ++ A ++NMP++PN V +LL AC G + L E +L+ L+P +YVL
Sbjct: 372 RAGLVKQAYEYIQNMPVQPNAVTWRTLLGACTIHGHLGLGETARSHLLKLEPKHSGDYVL 431
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSM 483
L+N+Y + +W IRR+M G++K G S +E+G+ ++EF G+RSH +S+ +Y++
Sbjct: 432 LSNLYTSECRWADVQLIRRSMLKDGVKKTSGYSLVELGNRVYEFTMGNRSHPQSQDVYAL 491
Query: 484 LELLSFDLKLCGYVPET 500
LE ++ LKL GYVP T
Sbjct: 492 LEKITELLKLEGYVPHT 508
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 138/297 (46%), Gaps = 35/297 (11%)
Query: 80 HITFITLLSGCADFP-SQCLFLGAM----------IHGLVCKLGLDRNNVMVGTALLDMY 128
H+T + LS ++P ++C++L IH + G+ NN +G L+
Sbjct: 5 HVT--SFLSTTPEYPLTKCIYLLQFCASSKHKLRXIHAFSIRHGVLLNNPDMGKHLI--- 59
Query: 129 AKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLN 188
F + L+ + A V FTW + A +F + + +W +
Sbjct: 60 --FTIVSLSAPMSYAYNV---FTW-----------VLSYAYNVFTMIHNPNVFTWNTMTR 103
Query: 189 GFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD 248
G+ + AL +R+M +S +EPD T +L A + + G IH ++ F+
Sbjct: 104 GYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFES 163
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
V V N+L+ +Y+ CG E A VF+ M R LV+ S+I GFA+NG EAL F M
Sbjct: 164 LVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAXISVINGFALNGRPSEALTLFREMS 223
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI-YRVSPRIEHYGCIVDLYSR 364
EG +PDG + L+A + G +E G R + K+ R + + + ++DLY++
Sbjct: 224 AEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVTN--SLLDLYAK 278
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 120/256 (46%), Gaps = 46/256 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V S I+ +GR +EA F M+ G P+ T ++LLS A+ + L LG +H
Sbjct: 197 VAXISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGA--LELGRRVH 254
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ K+GL R N V +LLD+YAK +++ R ++ +W ++I G
Sbjct: 255 VYLLKVGL-RENSHVTNSLLDLYAK------CDAIWEXER--NAVSWTSLIVGLA----- 300
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+NGF EEALE FREM+ G+ P +T + VL AC
Sbjct: 301 ---------------------VNGF-----GEEALELFREMEGQGLVPSEITFVGVLYAC 334
Query: 226 ANVGTLGIGLWIHRYVLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLV 282
++ G L G R +K++F ++ ++DL SR G ++ A + Q M + V
Sbjct: 335 SHCGMLDEGFDYFRR-MKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAV 393
Query: 283 SWNSIIVGFAVNGFVG 298
+W +++ ++G +G
Sbjct: 394 TWRTLLGACTIHGHLG 409
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/459 (35%), Positives = 256/459 (55%), Gaps = 34/459 (7%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T ++ WT+ ++ ++G +EA F RM G + TF ++L+ C + L
Sbjct: 233 TDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSA--LEQ 290
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G IH + + D +NV VG+AL+DMY+K + LA V
Sbjct: 291 GKQIHAYIIRTRYD-DNVFVGSALVDMYSKCRSIKLAETV-------------------- 329
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
F M ++ ISWTAL+ G+ + G EEA+ F EMQ G++PD T+ S
Sbjct: 330 -----------FRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGS 378
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
V+++CAN+ +L G H L + V N L+ LY +CG IE A ++F M
Sbjct: 379 VISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHD 438
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
VSW +++ G+A G E ++ F M +G KPDGV+F G L+ACS AG +E G YF
Sbjct: 439 QVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFH 498
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M+K + + P +HY C++DLYSR+G+L++A ++ MPM P+ + G+LL+ACR +GD+
Sbjct: 499 SMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDM 558
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+ + + L+++DP ++YVLL +M+AA G+W+ ++RR M+ R ++K+PG S I+
Sbjct: 559 EIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKY 618
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+ +H F A D+SH S+ IY LE L+ + GY P+
Sbjct: 619 KNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPD 657
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 200/410 (48%), Gaps = 54/410 (13%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ IT T++ + + L G H + +LG N VG+ L+DMYAK + A
Sbjct: 138 PSRITMSTMVMAASALGDRAL--GKQFHCQILRLGFG-ANAFVGSPLVDMYAKMSLVGDA 194
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
FD + K+ +N MI G +R +E A R+F+ M RD+I+WT ++ GF + G
Sbjct: 195 KRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLES 254
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
EALE FR M+ G+ D T S+L AC + L G IH Y+++ + DNV V + L+
Sbjct: 255 EALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALV 314
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
D+YS+C I+ A VF+RM + ++SW ++IVG+ NG EA+ F+ MQ++G PD
Sbjct: 315 DMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDY 374
Query: 318 SFTGALTACSH-----------------------------------AGLIEDGLRYFDIM 342
+ +++C++ G IED R FD M
Sbjct: 375 TLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM 434
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGD 399
+VS + +V Y++ GR ++ +++ E M +KP+ V +L+AC G
Sbjct: 435 SFHDQVS-----WTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAG- 488
Query: 400 IILAERLMKYLVDL--DPG---VDSNYVLLANMYAAVGKWDGAGKIRRTM 444
E+ Y + D G +D +Y + ++Y+ GK A + + M
Sbjct: 489 --FVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQM 536
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 128/291 (43%), Gaps = 34/291 (11%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
LL Y K GR A VFDAM + FT+NA++ + +F M RD +S+
Sbjct: 47 LLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSY 106
Query: 184 TALLNGFVKRGYFEEALECFREM--QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
A++ GF G +A+ + + S V P +T+ +++ A + +G +G H +
Sbjct: 107 NAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQI 166
Query: 242 LKQDFKDNVKVCNTLIDLYS-------------------------------RCGCIEFAR 270
L+ F N V + L+D+Y+ RC +E AR
Sbjct: 167 LRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEAR 226
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
++F+ M R ++W +++ GF NG EALE F M+ +G D +F LTAC
Sbjct: 227 RLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALS 286
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+E G + + + R + +VD+YS+ ++ A V M K
Sbjct: 287 ALEQGKQIHAYIIRT-RYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCK 336
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 143/335 (42%), Gaps = 57/335 (17%)
Query: 34 QTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADF 93
+T + T + WT+ I + ++G EA F+ M G +P+ T +++S CA+
Sbjct: 327 ETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANL 386
Query: 94 PSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWN 153
S L GA H L GL + + V AL+ +Y K G ++ A +FD M +W
Sbjct: 387 AS--LEEGAQFHCLALVSGL-MHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWT 443
Query: 154 AMIDGYMRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQI- 208
A++ GY + G + + +F++M + D +++ +L+ + G+ E+ F MQ
Sbjct: 444 ALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKD 503
Query: 209 -------------------SG-------------VEPDYVTIISVLNACANVGTLGIGLW 236
SG + PD + ++L+AC G + IG W
Sbjct: 504 HGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKW 563
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL-----VSW----NSI 287
+L+ D ++ L +++ G Q+ + M R + SW N +
Sbjct: 564 AAENLLEIDPQNPASYV-LLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKV 622
Query: 288 IVGFA------VNGFVGEALEYFNS-MQKEGFKPD 315
+ A + + E LE+ NS M +EG+KPD
Sbjct: 623 HIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPD 657
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 249/448 (55%), Gaps = 34/448 (7%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T V WT+ I + + G+ A F RM +PN TF ++SGCA +
Sbjct: 231 TQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGR--IEW 288
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +H V + GL +++ V +++ MY+K ++DLA+ VF + + +W+ MI GY
Sbjct: 289 GEQLHAHVIRRGL-VDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYA 347
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G E A D +SW M+ G P+ S
Sbjct: 348 QGGCGEEAF---------DYLSW----------------------MRREGPRPNEFAFAS 376
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
VL+ C N+ L G +H +VL + N V + LI++YS+CG I+ A ++F
Sbjct: 377 VLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNN 436
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+VSW ++I G+A +G+ EA++ F + K G +PD V+F L ACSHAGL++ G YF+
Sbjct: 437 IVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFN 496
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+ K++++ P +HYGC++DL RAGRL DA +++++MP + ++VV +LL ACR GD+
Sbjct: 497 SLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDV 556
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+R + ++ LDP ++ LANMYAA GKW A ++R+ MK +G+ K+PG S I+
Sbjct: 557 DCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKF 616
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLS 488
+ F++GDRSH E E+IY +L+LL+
Sbjct: 617 KDRVSAFVSGDRSHPEGEYIYDVLDLLA 644
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 183/390 (46%), Gaps = 67/390 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I+ R+G EA F+ M + + TF + L CAD S L G IH
Sbjct: 135 VSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACAD--SGALNYGREIH 192
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
K G + + T L MY K G++D
Sbjct: 193 CQTLKKGFTAVSFVANT-LATMYNKCGKLDYG---------------------------- 223
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+R+F+ M RD +SWT ++ V+ G E A++ FR M+ + V P+ T +V++ C
Sbjct: 224 ---LRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGC 280
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A +G + G +H +V+++ D++ V N+++ +YS+C ++ A VFQ + +R ++SW+
Sbjct: 281 ATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWS 340
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF------ 339
++I G+A G EA +Y + M++EG +P+ +F L+ C + ++E G +
Sbjct: 341 TMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCV 400
Query: 340 -------------------DIMKKIYRVSPRIEH-----YGCIVDLYSRAGRLEDALNVV 375
+K+ ++ E+ + +++ Y+ G ++A+++
Sbjct: 401 GLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLF 460
Query: 376 ENMP---MKPNEVVLGSLLAACRTKGDIIL 402
+ +P ++P+ V ++LAAC G + L
Sbjct: 461 KKLPKVGLRPDSVTFIAVLAACSHAGLVDL 490
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 157/336 (46%), Gaps = 43/336 (12%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GV 211
N ++ ++ G + +A ++FD+M RD ISWT +++G+V EAL F +M + G+
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
D + L AC ++ G +H Y +K DF ++V V + L+D+Y + G ++
Sbjct: 65 HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
VF+ M R +VSW +II G G+ EAL YF+ M + D +F+ AL AC+ +G
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGA 184
Query: 332 IEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK--------- 381
+ G + +KK + + + + +Y++ G+L+ L + E+M +
Sbjct: 185 LNYGREIHCQTLKKGFTAVSFVAN--TLATMYNKCGKLDYGLRLFESMTQRDVVSWTTII 242
Query: 382 -------------------------PNEVVLGSLLAACRTKGDIILAERLMKYLVD---L 413
PNE ++++ C T G I E+L +++ +
Sbjct: 243 MSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLV 302
Query: 414 DPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
D +N ++ MY+ + D A + + + R I
Sbjct: 303 DSLSVANSIMA--MYSKCWQLDLASTVFQGLSRRDI 336
>gi|125564403|gb|EAZ09783.1| hypothetical protein OsI_32071 [Oryza sativa Indica Group]
Length = 628
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 256/452 (56%), Gaps = 8/452 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + + H RSG + F +M + G + T L+ CA+ P G IH
Sbjct: 172 VAWNTLLMGHSRSGNAKQCLALFNQMWMSGLTCDDATLCILVDACAELPDPST--GFAIH 229
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+V + G + V +L+ Y KF +D A +F++M+ +++ +WN++ID + R G I
Sbjct: 230 KVVVQSGWN-GIPEVNNSLISFYTKFSLLDCAVQIFESMKTRTTASWNSLIDAHARFGYI 288
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNA 224
E A +F+ P + ISWTA++ GF + G EAL F +M ++PD T +VL+A
Sbjct: 289 EQAALLFESAPETNIISWTAMIGGFARNGLTSEALAHFVKMLTQEYIQPDDFTFGAVLHA 348
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA+ L G +H + F + V N L+D+Y++CG +E A VF +H++ LVSW
Sbjct: 349 CASAPCLASGRMVHSCAFQGGFASYLYVANNLVDMYAKCGDVEGANNVFDAIHQKDLVSW 408
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+++ GFA+NG EALE + M PD V+FTG LTACSH+GL+E G +F+ M
Sbjct: 409 NTMLFGFAINGLPKEALEVYEIMTYHNVSPDEVTFTGLLTACSHSGLLEQGRAFFESMMS 468
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKG-DI 400
++ V P+ EH C++D+Y+R+G + A+ ++E P P + + L+ C ++ D
Sbjct: 469 VHGVQPKPEHLSCVLDMYARSGNIAKAIEMMEQYPEIVKSPGSGLSEASLSFCSSENLDF 528
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
+ ++ +V P D+ YV+L+N+ A G+WD A ++RR M +GI+K PG S IE+
Sbjct: 529 WVGRKVGDDVVARAPARDTGYVMLSNLLCASGRWDEAERVRRAMAEQGIKKSPGCSWIEV 588
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+ F++ +++ ++ +Y ++ LL ++++
Sbjct: 589 KGKVKVFVSSEQAIDLTDTVYGLIYLLDYEMR 620
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 33/294 (11%)
Query: 120 VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD 179
VG AL+ MYAK R A F M +++ +W +++ ++ G +E A +FDEMP +
Sbjct: 111 VGNALVSMYAKCARAADAARAFREMPERNALSWCSLLHAFVVSGHMELAHELFDEMPSKS 170
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHR 239
++W LL G + G ++ L F +M +SG+ D T+ +++ACA + G IH+
Sbjct: 171 NVAWNTLLMGHSRSGNAKQCLALFNQMWMSGLTCDDATLCILVDACAELPDPSTGFAIHK 230
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIV---------- 289
V++ + +V N+LI Y++ ++ A Q+F+ M RT SWNS+I
Sbjct: 231 VVVQSGWNGIPEVNNSLISFYTKFSLLDCAVQIFESMKTRTTASWNSLIDAHARFGYIEQ 290
Query: 290 ---------------------GFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACS 327
GFA NG EAL +F M +E +PD +F L AC+
Sbjct: 291 AALLFESAPETNIISWTAMIGGFARNGLTSEALAHFVKMLTQEYIQPDDFTFGAVLHACA 350
Query: 328 HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
A + G R + + +VD+Y++ G +E A NV + + K
Sbjct: 351 SAPCLASG-RMVHSCAFQGGFASYLYVANNLVDMYAKCGDVEGANNVFDAIHQK 403
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 100/264 (37%), Gaps = 67/264 (25%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTR--------------------------------MT 72
T W S I H R G I +AAL F +T
Sbjct: 272 TASWNSLIDAHARFGYIEQAALLFESAPETNIISWTAMIGGFARNGLTSEALAHFVKMLT 331
Query: 73 LHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFG 132
P+ TF +L CA P CL G M+H + G + + V L+DMYAK G
Sbjct: 332 QEYIQPDDFTFGAVLHACASAP--CLASGRMVHSCAFQGGF-ASYLYVANNLVDMYAKCG 388
Query: 133 RMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVK 192
++ A VFDA+ K +WN M L GF
Sbjct: 389 DVEGANNVFDAIHQKDLVSWNTM-------------------------------LFGFAI 417
Query: 193 RGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK-QDFKDNVK 251
G +EALE + M V PD VT +L AC++ G L G ++ + +
Sbjct: 418 NGLPKEALEVYEIMTYHNVSPDEVTFTGLLTACSHSGLLEQGRAFFESMMSVHGVQPKPE 477
Query: 252 VCNTLIDLYSRCGCIEFARQVFQR 275
+ ++D+Y+R G I A ++ ++
Sbjct: 478 HLSCVLDMYARSGNIAKAIEMMEQ 501
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 44/246 (17%)
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+FD MP RDA++W A+L + + AL F M+ PD ++ + L A A + +
Sbjct: 34 VFDAMPRRDAVAWNAMLTAYARAARPRAALALFARMR----APDAFSLTAALAAAAALRS 89
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLY----------------------SRC----- 263
G +H +L+ + + V N L+ +Y S C
Sbjct: 90 PAAGAQLHGRLLRLGLRAPLPVGNALVSMYAKCARAADAARAFREMPERNALSWCSLLHA 149
Query: 264 ----GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF 319
G +E A ++F M ++ V+WN++++G + +G + L FN M G D +
Sbjct: 150 FVVSGHMELAHELFDEMPSKSNVAWNTLLMGHSRSGNAKQCLALFNQMWMSGLTCDDATL 209
Query: 320 TGALTACSHAGLIEDGLRYFDIMKKIYRVS----PRIEHYGCIVDLYSRAGRLEDALNVV 375
+ AC+ + D F I K + + P + + ++ Y++ L+ A+ +
Sbjct: 210 CILVDACAE---LPDPSTGFAIHKVVVQSGWNGIPEVNN--SLISFYTKFSLLDCAVQIF 264
Query: 376 ENMPMK 381
E+M +
Sbjct: 265 ESMKTR 270
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/456 (36%), Positives = 252/456 (55%), Gaps = 33/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ I+ + + R +A L M G PN T +LL + S + G +
Sbjct: 81 VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HGL + G D +NV V A+LDMYA R
Sbjct: 141 HGLCLRYGYD-SNVYVSCAILDMYA-------------------------------RCHH 168
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A +FD M ++ +SW AL+ G+ ++G ++A F M V+P + T SVL A
Sbjct: 169 LEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCA 228
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G+L G W+H ++K K V NTL+D+Y++ G IE A++VF R+ KR +VSW
Sbjct: 229 CASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSW 288
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
NS++ G++ +G AL+ F M + P+ ++F LTACSHAGL+++G YFD+MKK
Sbjct: 289 NSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKK 348
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y V P+I HY +VDL RAG L+ A+ + MP+KP V G+LL ACR ++ L
Sbjct: 349 -YNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGG 407
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ + +LD +VLL N+YA G+W+ A K+R+ MK G++K+P S +E+ + +
Sbjct: 408 YAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEV 467
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
H F+A D +H + I++M E +S +K GYVP++
Sbjct: 468 HVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDS 503
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 136/250 (54%), Gaps = 8/250 (3%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N +++ Y + GD+ A ++FDEM RD ++WTAL+ G+ + ++AL EM G++
Sbjct: 54 NTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLK 113
Query: 213 PDYVTIISVLNACANVGTLGI--GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
P+ T+ S+L A + VG+ + G +H L+ + NV V ++D+Y+RC +E A+
Sbjct: 114 PNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQ 173
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
+F M + VSWN++I G+A G +A F++M +E KP +++ L AC+ G
Sbjct: 174 LIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMG 233
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
+E G +M K ++ + ++D+Y+++G +EDA V + + K + V
Sbjct: 234 SLEQGKWVHALMIKW---GEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLA-KRDVVSWN 289
Query: 389 SLLAACRTKG 398
S+L G
Sbjct: 290 SMLTGYSQHG 299
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 4/181 (2%)
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
++L C ++ L G IH +L F+D++ + NTL++LY++CG + +AR++F M R
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE--DGLR 337
+V+W ++I G++ + +AL M + G KP+ + L A S G + G +
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
+ + Y + I+D+Y+R LE+A + + M K NEV +L+A K
Sbjct: 140 LHGLCLR-YGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSK-NEVSWNALIAGYARK 197
Query: 398 G 398
G
Sbjct: 198 G 198
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/459 (34%), Positives = 254/459 (55%), Gaps = 18/459 (3%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W +S H G E RM G PN + ++L ++ L +G H
Sbjct: 877 VTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISEL--GFLNMGKETH 934
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V + G D +V VGT+L+DMY K + A VFD M+ ++ F WN+++ GY +G
Sbjct: 935 GYVLRNGFD-CDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMF 993
Query: 166 ESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
E A+R+ ++M D ++W +++G+ G C R+ P+ +I +
Sbjct: 994 EDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG-------CARK----AFMPNSASITCL 1042
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L ACA++ L G IH ++ F ++V V LID+YS+ ++ A +VF+R+ +TL
Sbjct: 1043 LRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTL 1102
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
SWN +I+GFA+ G EA+ FN MQK G PD ++FT L+AC ++GLI +G +YFD
Sbjct: 1103 ASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDS 1162
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M YR+ PR+EHY C+VDL RAG L++A +++ MP+KP+ + G+LL +CR ++
Sbjct: 1163 MITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLX 1222
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
AE K L L+P +NY+L+ N+Y+ +W+ +R M G++ + S I+I
Sbjct: 1223 FAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQIN 1282
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F + ++ H ++ IY L L ++K GYVP+
Sbjct: 1283 QRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDV 1321
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 156/379 (41%), Gaps = 75/379 (19%)
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
++LG IHG + K G D LD+Y + A+++
Sbjct: 690 IWLGMEIHGCLIKRGFD----------LDVYLRC----------------------ALMN 717
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
Y R +E A ++F EMP +A+ W + ++ ++ +E FR+MQ S ++ + T
Sbjct: 718 FYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETAT 777
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
I+ VL AC +G L IH YV + +V +CN LI +YS+ G +E AR+VF M
Sbjct: 778 IVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSME 837
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYF--------------------------------- 304
R SWNS+I +A GF+ +A F
Sbjct: 838 NRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLN 897
Query: 305 --NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVD 360
MQ EGFKP+ S T L A S G + G + + R + Y ++D
Sbjct: 898 ILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGK---ETHGYVLRNGFDCDVYVGTSLID 954
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
+Y + L A V +NM + N SL++ KG A RL+ + G+ +
Sbjct: 955 MYVKNHSLXSAQAVFDNMKNR-NIFAWNSLVSGYSFKGMFEDALRLLNQME--KEGIKPD 1011
Query: 421 YVLLANMYAAVGKWDGAGK 439
V M + W A K
Sbjct: 1012 LVTWNGMISGYAMWGCARK 1030
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 138/324 (42%), Gaps = 18/324 (5%)
Query: 146 VKSSFTWNA------MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR-GYFEE 198
+K WN +I Y+ GD SA +F R+ + W + + F G
Sbjct: 598 IKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHI 657
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
LE F+E+ GV D L C V + +G+ IH ++K+ F +V + L++
Sbjct: 658 VLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMN 717
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVS 318
Y RC +E A QVF M + WN I+ + + + +E F MQ K + +
Sbjct: 718 FYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETAT 777
Query: 319 FTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC--IVDLYSRAGRLEDALNVVE 376
L AC G + + I ++R + C ++ +YS+ G+LE A V +
Sbjct: 778 IVRVLQACGKMGALNAAKQ---IHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFD 834
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL--VDLDPGVDSNYVLLANMYAAVGKW 434
+M + N S++++ G + A L L D+ P + + LL+ + G
Sbjct: 835 SMENR-NTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLH-GYK 892
Query: 435 DGAGKIRRTMKGRGIQKKPGLSSI 458
+ I + M+G G KP SS+
Sbjct: 893 EEVLNILQRMQGEGF--KPNSSSM 914
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 251/454 (55%), Gaps = 35/454 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I ++G EA F +M G P +T + +L CA+ L G +H
Sbjct: 313 VSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGD--LERGWFVH 370
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L+ KL LD +NV V +L+ MY+K R+D+A +F+ +
Sbjct: 371 KLLDKLKLD-SNVSVMNSLISMYSKCKRVDIAASIFNNLE-------------------- 409
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ ++W A++ G+ + G +EAL F MQ G++ D T++ V+ A
Sbjct: 410 ------------KTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITAL 457
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A+ WIH ++ +NV V L+D+Y++CG I+ AR++F M +R +++WN
Sbjct: 458 ADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWN 517
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G+ +G E L+ FN MQK KP+ ++F ++ACSH+G +E+GL F M++
Sbjct: 518 AMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQED 577
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P ++HY +VDL RAG+L+DA N ++ MP+KP VLG++L AC+ ++ L E+
Sbjct: 578 YYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEK 637
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ L LDP +VLLAN+YA+ WD K+R M+ +G+ K PG S +E+ + IH
Sbjct: 638 AAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIH 697
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
F +G +H ES+ IY+ LE L ++K GYVP+
Sbjct: 698 TFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPD 731
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 174/349 (49%), Gaps = 7/349 (2%)
Query: 49 TSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLV 108
T IS C+ G +EAA F + L HI + + C FL M +
Sbjct: 83 TKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVR 142
Query: 109 CKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESA 168
+G + + LD+ K GR ++ + + F A++ Y + I++A
Sbjct: 143 LVVGDYACLLQLCGENLDL--KKGREIHGLIITNGFE-SNLFVMTAVMSLYAKCRQIDNA 199
Query: 169 VRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
+MF+ M +D +SWT L+ G+ + G+ + AL+ +MQ +G +PD VT++S+L A A++
Sbjct: 200 YKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADM 259
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
L IG IH Y + F+ V V N L+D+Y +CG AR VF+ M +T+VSWN++I
Sbjct: 260 KALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMI 319
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
G A NG EA F M EG P V+ G L AC++ G +E G ++ K+ ++
Sbjct: 320 DGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKL-KL 378
Query: 349 SPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAAC 394
+ ++ +YS+ R++ A ++ N+ + N ++LG C
Sbjct: 379 DSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNVTWNAMILGYAQNGC 427
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 207/330 (62%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G + A +F EMP RD +SW ++L + + G EAL F +M+ GV+P T++S+L
Sbjct: 162 GKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLL 221
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+ACA++G L GL +H Y+ + N V L+D+Y++CG I A QVF M + ++
Sbjct: 222 SACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVL 281
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+WN+II G A++G V EA F M++ G +P+ ++F L+ACSHAG++++G + D M
Sbjct: 282 AWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCM 341
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
Y + P++EHYGC++DL +RAG LE+A+ ++ MPM+PN LG+LL CR G+ L
Sbjct: 342 SSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIHGNFEL 401
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
E + K L++L P Y+LL+N+YAA KWD A K+R MK GI K PG+S IE+
Sbjct: 402 GEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKG 461
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+H F+AGD SH ES IY L + LK
Sbjct: 462 MVHRFVAGDWSHPESNKIYEKLNEIHTRLK 491
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 112/237 (47%), Gaps = 43/237 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S ++ + + G+ EA F +M G P T ++LLS CA LGA+
Sbjct: 179 VVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACA-------HLGALD 231
Query: 105 HGLVCKLGLDRN----NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
GL ++ N N +VGTAL+DMYAK G++ LAT VF+AM K WN +I G
Sbjct: 232 KGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMA 291
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G ++ A R+ F+EM+ +GVEP+ +T ++
Sbjct: 292 IHGHVKEAQRL-------------------------------FKEMKEAGVEPNDITFVA 320
Query: 221 VLNACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+L+AC++ G + G + + + V+ +IDL +R G +E A ++ M
Sbjct: 321 MLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTM 377
>gi|115476560|ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42409483|dbj|BAD09839.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623845|dbj|BAF23790.1| Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 226/360 (62%), Gaps = 4/360 (1%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ--ISG 210
+++ Y GD +SA ++FDEMPVRD I+W L+ + + ++AL+ F M+ +G
Sbjct: 164 TSLVSSYAACGDGDSARKVFDEMPVRDTIAWNVLITCYTRNRRTKDALKLFDAMRGGENG 223
Query: 211 VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
EPD VT I +L AC ++G L G + Y + + +KV N+LI +Y++CGC++ A
Sbjct: 224 AEPDDVTCILLLQACTSLGALDFGEKVWEYAVDHGYGGELKVRNSLITMYTKCGCVDKAY 283
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
QVF K+++V+W+++I G A NGF +A+ F M + G PD +FTG L+ACSH+G
Sbjct: 284 QVFCETPKKSVVTWSAMISGLASNGFGKDAISAFEEMGRSGVAPDEQTFTGVLSACSHSG 343
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN-VVENMPMKPNEVVLGS 389
L+++G ++FDIM Y++ P + HYGC+VDL RAG L+ A VV++M + P+ + +
Sbjct: 344 LVDEGFKFFDIMCYEYQLKPNVHHYGCMVDLMGRAGLLDQAYELVVKDMRVAPDATIWRT 403
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
LL ACR G I L ER++ +L++L +YVLL N YAAV W ++R+ MK +GI
Sbjct: 404 LLGACRIHGHIDLGERVINHLIELKAQQAGDYVLLLNTYAAVEDWGKVAEVRKLMKEKGI 463
Query: 450 QKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
Q PG +++E+ IHEF+A D SH IY L+ ++ L++ GYVP V+ EL++ D
Sbjct: 464 QTTPGCTTVELNGEIHEFIAADASHPRKAEIYEKLDEINKHLRIAGYVP-NVSSELHDLD 522
>gi|224122234|ref|XP_002318784.1| predicted protein [Populus trichocarpa]
gi|222859457|gb|EEE97004.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 214/348 (61%), Gaps = 3/348 (0%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N +ID MR + A +F++M RD ++W ++ G+V++ FEEAL FR M S VE
Sbjct: 80 NLIIDKLMRTENYRVAKMVFNKMRARDVVTWNTMIGGYVRKARFEEALRLFRFMNKSNVE 139
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD T SV+N CA +G L W+H ++++ + N + + LID+YS+CG I+ A+++
Sbjct: 140 PDKYTFASVINGCAKLGALKHAQWVHELLIEKRIELNFILSSALIDMYSKCGKIQTAKEI 199
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F + + + WN++I G AV+G +A++ F M+ E PD ++F G LTACSH GL+
Sbjct: 200 FDGVQRNNVCIWNAMISGLAVHGLALDAIKVFTKMEVENVLPDAITFLGILTACSHCGLV 259
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
++G +YFD+M+ Y V P IEHYG +VDL RAG LE+A ++++MPM+P+ V+ +LL
Sbjct: 260 KEGRKYFDLMRSRYSVQPHIEHYGAMVDLLGRAGLLEEAFAMIKSMPMEPDVVIWRALLG 319
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
ACRT L E M + L G +YVLL+N+Y + +WD A + MK +G+ K
Sbjct: 320 ACRTYKKPELGEAAMANISRLRSG---DYVLLSNIYCSQKRWDTAQGVWEMMKKKGVHKV 376
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
G S E +H F AGDRSH E+E IY MLE L KL GYVP T
Sbjct: 377 RGKSCFEWAGFLHPFKAGDRSHPETEAIYKMLEGLIQRTKLAGYVPTT 424
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 52/261 (19%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
+K V W + I + R R EA F M P+ TF ++++GCA
Sbjct: 100 NKMRARDVVTWNTMIGGYVRKARFEEALRLFRFMNKSNVEPDKYTFASVINGCAK----- 154
Query: 98 LFLGAMIHG-LVCKLGLDRN---NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWN 153
LGA+ H V +L +++ N ++ +AL+DMY+K G++ A +FD ++ + WN
Sbjct: 155 --LGALKHAQWVHELLIEKRIELNFILSSALIDMYSKCGKIQTAKEIFDGVQRNNVCIWN 212
Query: 154 AMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEP 213
AMI G G A+++F +M V + + P
Sbjct: 213 AMISGLAVHGLALDAIKVFTKMEVENVL-------------------------------P 241
Query: 214 DYVTIISVLNACANVGTLGIG-----LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
D +T + +L AC++ G + G L RY + +++ ++DL R G +E
Sbjct: 242 DAITFLGILTACSHCGLVKEGRKYFDLMRSRY----SVQPHIEHYGAMVDLLGRAGLLEE 297
Query: 269 ARQVFQRM-HKRTLVSWNSII 288
A + + M + +V W +++
Sbjct: 298 AFAMIKSMPMEPDVVIWRALL 318
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/459 (35%), Positives = 258/459 (56%), Gaps = 35/459 (7%)
Query: 43 NPTVQWTSSISR-HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
P + ++++R + R+ A FT++ G P+ TF +LL CA + L G
Sbjct: 83 QPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACAS--CKALEEG 140
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H L KLGL N V V L++MY MD A VFD + W +
Sbjct: 141 RQLHCLAIKLGLSEN-VYVCPTLINMYTACNEMDCARRVFDKI-------WEPCV----- 187
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
+++ A++ G+ + EAL FRE+Q ++P VT++SV
Sbjct: 188 -------------------VTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSV 228
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L++CA +G L +G W+H YV K F VKV LID+Y++CG ++ A VF+ M R
Sbjct: 229 LSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDT 288
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+W+++I+ +A++G +A+ F M+K G +PD ++F G L ACSH GL+E+G YF
Sbjct: 289 QAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYG 348
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M+ Y V P I+HYGC+VDL RAGRLE+A + +P++P ++ +LL+AC + G++
Sbjct: 349 MRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVE 408
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
L +R+++ + +LD +Y++L+N+ A G+W+ +R+ M RG+ K PG SS+E+
Sbjct: 409 LGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVN 468
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ +HEF +GD H S ++ L+ L +LKL GYVP T
Sbjct: 469 NVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNT 507
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 122/228 (53%), Gaps = 1/228 (0%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ A +FD++P D + + + G+ + A F ++ SG+ PD T S+L A
Sbjct: 71 MQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKA 130
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA+ L G +H +K +NV VC TLI++Y+ C ++ AR+VF ++ + +V++
Sbjct: 131 CASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTY 190
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G+A EAL F +Q KP V+ L++C+ G ++ G + +KK
Sbjct: 191 NAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKK 250
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
+ ++ ++D+Y++ G L+DA+ V ENM ++ + ++A
Sbjct: 251 -NGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMA 297
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 253/465 (54%), Gaps = 34/465 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W + I + ++G EA F RM G + ++ + L C + CL G +
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELG--CLDEGMRV 284
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H L+ ++GLD +NV V AL+ MY+K R+DLA+ V
Sbjct: 285 HELLVRIGLD-SNVSVMNALITMYSKCKRVDLASHV------------------------ 319
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
FDE+ R +SW A++ G + G E+A+ F MQ+ V+PD T++SV+ A
Sbjct: 320 -------FDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPA 372
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
A++ WIH Y ++ +V V LID+Y++CG + AR +F +R +++W
Sbjct: 373 LADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITW 432
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G+ +GF A+E F M+ G P+ +F L+ACSHAGL+++G YF MK+
Sbjct: 433 NAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKE 492
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P +EHYG +VDL RAG+L++A ++ MPM P V G++L AC+ ++ LAE
Sbjct: 493 DYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAE 552
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ + +L P +VLLAN+YA W ++R M+ G+QK PG S I++ + I
Sbjct: 553 ESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEI 612
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
H F +G +H +++ IYS L L ++K GYVP+T + E+D
Sbjct: 613 HTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSIHDVEDD 657
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 203/456 (44%), Gaps = 85/456 (18%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFT-RMTLH-GTNPNHITFITLLSGCADFPSQCLF 99
V V W + ++ + R+G +A A+E RM G P+ IT +++L CA+ +
Sbjct: 122 VRDRVAWNALVAGYARNG-LARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
A H + GL+ V V TA+LD Y K G + A VVFD M K+S +WNAMIDGY
Sbjct: 181 REA--HAFAIRSGLE-ELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGY 237
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ GD A+ +F+ M EE GV+ V+++
Sbjct: 238 AQNGDSREALALFNRM--------------------VEE-----------GVDVTDVSVL 266
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+ L AC +G L G+ +H +++ NV V N LI +YS+C ++ A VF + +R
Sbjct: 267 AALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRR 326
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
T VSWN++I+G A NG +A+ F MQ E KPD + + A + I D L+
Sbjct: 327 TQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALAD---ISDPLQAR 383
Query: 340 DIMKKIYRVSPRIEHY--GCIVDLYSRAGRL----------------------------- 368
I R+ + Y ++D+Y++ GR+
Sbjct: 384 WIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHG 443
Query: 369 --EDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERL---MKYLVDLDPGVDSN 420
+ A+ + E M + PNE S+L+AC G + MK L+PG++ +
Sbjct: 444 FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGME-H 502
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
Y + ++ GK D A + M PGLS
Sbjct: 503 YGTMVDLLGRAGKLDEAWAFIQKMP-----MDPGLS 533
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 156/332 (46%), Gaps = 37/332 (11%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F M+ G P TF +LL CA L G +H + G+D + + TAL +M
Sbjct: 47 FVAMSSAGAPPVLRTFTSLLKLCAARGD--LATGRAVHAQLAARGID-SEALAATALANM 103
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YAK R A R+FD MPVRD ++W AL+
Sbjct: 104 YAKCRRP-------------------------------ADARRVFDRMPVRDRVAWNALV 132
Query: 188 NGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
G+ + G A+E MQ G PD +T++SVL ACAN L H + ++
Sbjct: 133 AGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGL 192
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
++ V V ++D Y +CG I AR VF M + VSWN++I G+A NG EAL FN
Sbjct: 193 EELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNR 252
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M +EG VS AL AC G +++G+R +++ +I + + ++ +YS+
Sbjct: 253 MVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRI-GLDSNVSVMNALITMYSKCK 311
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
R++ A +V + + + +V +++ C G
Sbjct: 312 RVDLASHVFDELDRR-TQVSWNAMILGCAQNG 342
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 110/261 (42%), Gaps = 27/261 (10%)
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
A L R AL F M +G P T S+L CA G L G +H + +
Sbjct: 29 ARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAAR 88
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
L ++Y++C AR+VF RM R V+WN+++ G+A NG A+E
Sbjct: 89 GIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMV 148
Query: 305 NSMQ-KEGFKPDGVSFTGALTAC-----------SHAGLIEDGLRYFDIMKKIYRVSPRI 352
MQ +EG +PD ++ L AC +HA I GL +++ V+
Sbjct: 149 VRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGL------EELVNVAT-- 200
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD 412
I+D Y + G + A V + MP K N V +++ GD A L +V
Sbjct: 201 ----AILDAYCKCGDIRAARVVFDWMPTK-NSVSWNAMIDGYAQNGDSREALALFNRMV- 254
Query: 413 LDPGVDSNYVLLANMYAAVGK 433
+ GVD V + A G+
Sbjct: 255 -EEGVDVTDVSVLAALQACGE 274
>gi|125554650|gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indica Group]
Length = 602
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 224/373 (60%), Gaps = 8/373 (2%)
Query: 133 RMDLATVVF-----DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
R DLA V+F A+ V S W M+ G R G ++ A +FD MP R+ +SW +++
Sbjct: 146 RPDLARVLFRTSGGGALDVVS---WTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMI 202
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
+G+VK F +ALE F EM+ GVE + S L AC G LG G I+R+V + +
Sbjct: 203 SGYVKADRFLDALEVFDEMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIE 262
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
+ K+ ++D+Y +CGC++ A +VF + R L +WN +I GFAV+G +ALE F+ M
Sbjct: 263 VDAKLATAVVDMYCKCGCVDEAWRVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQM 322
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+ G PD V+ LTAC+HAG + +G RY + + + + P+ EHYGC+VDL+ RAG+
Sbjct: 323 EAAGVAPDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQ 382
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
L++A V++ MPM P+ VLG+LL AC+ GD+ L E + ++DLDP YVLLAN+
Sbjct: 383 LDEAKKVIDEMPMDPDLAVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANL 442
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
A G+WD GK+RR M R + K+ G S IE+ EF G+ H ++ IY+M +
Sbjct: 443 LAGAGRWDEVGKVRRLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDM 502
Query: 488 SFDLKLCGYVPET 500
++ GYVP+T
Sbjct: 503 VSRIRAEGYVPDT 515
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 118/238 (49%), Gaps = 14/238 (5%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM- 103
V WT+ + CR G + +A F M N +++ +++SG + FL A+
Sbjct: 164 VVSWTTMVGGLCRLGLVDDAREVFDAMPAR----NLVSWNSMISG---YVKADRFLDALE 216
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAK----FGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+ + LG++ N + +AL+ GR V + V + A++D Y
Sbjct: 217 VFDEMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLA-TAVVDMY 275
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ G ++ A R+FD +P R +W ++ GF G ++ALE F +M+ +GV PD VT++
Sbjct: 276 CKCGCVDEAWRVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLL 335
Query: 220 SVLNACANVGTLGIG-LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+VL ACA+ G + G +++ V + + + ++DL+ R G ++ A++V M
Sbjct: 336 NVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEM 393
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/417 (38%), Positives = 243/417 (58%), Gaps = 9/417 (2%)
Query: 93 FPSQCLFLGAMIHGLVCKLGL----DRNNVMVGTALLDMYAKFGRMD---LATVVFDAMR 145
FP + +H L L R NV + K +++ + T+V
Sbjct: 65 FPYNAVIRHVALHAPSLALALFSHMHRTNVPFDHFTFPLILKSSKLNPHCIHTLVLKLGF 124
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
+ + NA+I+ Y G + +++++FDEMP RD ISW++L++ F KRG +EAL F++
Sbjct: 125 HSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTLFQQ 184
Query: 206 MQI--SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC 263
MQ+ S + PD V ++SV++A +++G L +G+W+H ++ + V + + LID+YSRC
Sbjct: 185 MQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDMYSRC 244
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
G I+ + +VF M R +V+W ++I G AV+G EALE F M + G KPD ++F G L
Sbjct: 245 GDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFMGVL 304
Query: 324 TACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPN 383
ACSH GL+E+G R F M Y + P +EHYGC+VDL RAG + +A + VE M ++PN
Sbjct: 305 VACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVEGMRVRPN 364
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRT 443
V+ +LL AC ++LAE+ + + +LDP D +YVLL+N Y VG W +R +
Sbjct: 365 SVIWRTLLGACVNHNLLVLAEKAKERIKELDPHHDGDYVLLSNAYGGVGNWVKKEGVRNS 424
Query: 444 MKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
M+ I K+PGLS + I HEF++GD SH + E I L + +KL GY P T
Sbjct: 425 MRESKIVKEPGLSLVHIDQVAHEFVSGDNSHPQWEEITRFLGSVIDTVKLGGYTPST 481
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 39/253 (15%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTN--PNHITFITLLSGCADFPSQCLFLGAM 103
+ W+S IS + G EA F +M L ++ P+ + ++++S + + L LG
Sbjct: 160 ISWSSLISCFAKRGLPDEALTLFQQMQLKESDILPDGVVMLSVISAVSSLGA--LELGIW 217
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H + ++G++ V +G+AL+DMY++ G +D + VFD M ++ TW A+I
Sbjct: 218 VHAFISRIGVNLT-VSLGSALIDMYSRCGDIDRSVKVFDEMPHRNVVTWTALI------- 269
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
NG G EALE F +M SG++PD + + VL
Sbjct: 270 ------------------------NGLAVHGRGREALEAFYDMVESGLKPDRIAFMGVLV 305
Query: 224 ACANVGTLGIGLWIHRYVLKQ-DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR-TL 281
AC++ G + G + + + + ++ ++DL R G + A + M R
Sbjct: 306 ACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVEGMRVRPNS 365
Query: 282 VSWNSIIVGFAVN 294
V W +++ G VN
Sbjct: 366 VIWRTLL-GACVN 377
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/458 (34%), Positives = 268/458 (58%), Gaps = 7/458 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I+ + ++G A+A F+RM + T P+ T ++LS CA+ + +G +
Sbjct: 260 VSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLG--MVSIGKQV 317
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD--AMRVKSSFTWNAMIDGYMRR 162
H + + + V AL+ MYAK G ++ A V M + ++ A+++GY++
Sbjct: 318 HAYILRSRMPYIG-QVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKL 376
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD++ A MFD M RD ++WTA++ G+ + G+ +EA+E FR M SG EP+ T+ +VL
Sbjct: 377 GDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVL 436
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTL 281
+ CA++ L G IH ++ + + V N+++ +Y+R G + +AR+VF R+H ++
Sbjct: 437 SVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKET 496
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
V+W S+IV A +G +A+ F M + G KPD ++F G L+AC+H G +++G RYF
Sbjct: 497 VTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQ 556
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
++ + + P + HY C+VDL +RAG +A ++ MP++P+ + GSLL+ACR +
Sbjct: 557 LQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNAD 616
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LAE + L+ +DPG Y L+N+Y+A G+W+ A KI + K + ++K+ G S IG
Sbjct: 617 LAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIG 676
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+ +H F A D H + + +Y + D+K G+VP+
Sbjct: 677 NRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPD 714
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 186/388 (47%), Gaps = 40/388 (10%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT + R GR EA F M G +P T +LS CA ++ +G +H
Sbjct: 128 VSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCA--ATEARGVGRKVH 185
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V KLGL + V V ++L+MY K G + A VF+ M +S +WNAM+ G +
Sbjct: 186 SFVVKLGLS-SCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRM 244
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF-REMQISGVEPDYVTIISVLNA 224
+ A+ +F+ MP R +SW A++ G+ + G +AL F R + S + PD TI SVL+A
Sbjct: 245 DLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSA 304
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR--------- 275
CAN+G + IG +H Y+L+ +V N LI +Y++ G +E AR V Q+
Sbjct: 305 CANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVI 364
Query: 276 ------------------------MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
M R +V+W ++IVG+ NG EA+E F M + G
Sbjct: 365 SFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSG 424
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
+P+ + L+ C+ +E G + + ++ + S + + IV +Y+R+G L
Sbjct: 425 PEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSN--SIVTMYARSGSLPW 482
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKG 398
A V + + + V S++ A G
Sbjct: 483 ARRVFDRVHWRKETVTWTSMIVALAQHG 510
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 151/305 (49%), Gaps = 42/305 (13%)
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM 206
++ FTWN+++ Y + G + A +F EMP RD +SWT ++ G + G F EA++ F +M
Sbjct: 94 RNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDM 153
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
G+ P T+ +VL++CA G+G +H +V+K V V N+++++Y +CG
Sbjct: 154 VTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDA 213
Query: 267 EFARQVFQRMHK-------------------------------RTLVSWNSIIVGFAVNG 295
E AR VF+RM + RT+VSWN++I G+ NG
Sbjct: 214 ETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNG 273
Query: 296 FVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
+AL +F+ M PD + T L+AC++ G++ G + Y + R+ +
Sbjct: 274 LNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQV-----HAYILRSRMPY 328
Query: 355 YG----CIVDLYSRAGRLEDALNVVENMPMKP-NEVVLGSLLAACRTKGDIILAERLMKY 409
G ++ +Y+++G +E+A V++ M N + +LL GD+ A +
Sbjct: 329 IGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDV 388
Query: 410 LVDLD 414
+ + D
Sbjct: 389 MSNRD 393
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 123/346 (35%), Gaps = 113/346 (32%)
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL------------------------ 256
+L C G G IH +K + +CN L
Sbjct: 29 LLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDE 88
Query: 257 --------------IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
+ LY++ G + AR VF M +R VSW ++VG G GEA++
Sbjct: 89 IPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIK 148
Query: 303 YFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLRY------------- 338
F M +G P + T L++C+ H+ +++ GL
Sbjct: 149 MFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYG 208
Query: 339 ----FDIMKKIYRVSPR--IEHYGCIVDLYSRAGRLEDALNVVENMP------------- 379
+ + ++ P + + +V L + GR++ AL++ ENMP
Sbjct: 209 KCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAG 268
Query: 380 ----------------------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD-PG 416
M P+E + S+L+AC G + + +++ Y++ P
Sbjct: 269 YNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPY 328
Query: 417 VDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
+ L +MYA G + A RG+ ++ ++ + + S
Sbjct: 329 IGQVTNALISMYAKSGSVENA---------RGVMQQAVMADLNVIS 365
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/457 (36%), Positives = 250/457 (54%), Gaps = 41/457 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADF-PSQCLFLGAMI 104
V WT+ IS ++ EA F+ M G PN T+ +L+ PS+ +
Sbjct: 367 VSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSE-------V 419
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V K +R++ VGTALLD Y K G++D A VF + K W+AM+ GY + G+
Sbjct: 420 HAQVVKTNYERSST-VGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGE 478
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
E+A+++F E+ +G GV+P+ T S+LN
Sbjct: 479 TEAAIKIFSELT----------------KG---------------GVKPNEFTFSSILNV 507
Query: 225 C-ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
C A ++G G H + +K ++ V + L+ +Y++ G IE A +VF+R ++ LVS
Sbjct: 508 CAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVS 567
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WNS+I G+A +G +AL+ F M+K K D V+F G AC+HAGL+E+G +YFDIM
Sbjct: 568 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMV 627
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ +++P EH C+VDLYSRAG+LE A+ V++NMP + ++LAACR L
Sbjct: 628 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELG 687
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
+ ++ + P + YVLL+NMYA G W K+R+ M R ++K+PG S IE+ +
Sbjct: 688 RLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNK 747
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+ F+AGDRSH + IY LE LS LK GY P+T
Sbjct: 748 TYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDT 784
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 126/281 (44%), Gaps = 34/281 (12%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
+TS + R GR EA F + G + F ++L A + G +H
Sbjct: 65 YTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDE--LFGRQLHCQ 122
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
K G ++V VGT+L +D YM+ + +
Sbjct: 123 CIKFGF-LDDVSVGTSL-------------------------------VDTYMKGSNFKD 150
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+FDEM R+ ++WT L++G+ + EE L F MQ G +P+ T + L A
Sbjct: 151 GRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAE 210
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G G GL +H V+K + V N+LI+LY +CG + AR +F + +++V+WNS+
Sbjct: 211 EGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSM 270
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
I G+A NG EAL F SM+ + SF + C++
Sbjct: 271 ISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCAN 311
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 203/459 (44%), Gaps = 55/459 (11%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ IS + R+ E F RM GT PN TF L A+ G +H
Sbjct: 164 VTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAE--EGVGGRGLQVH 221
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+V K GLD K+ N++I+ Y++ G++
Sbjct: 222 TVVVKNGLD--------------------------------KTIPVSNSLINLYLKCGNV 249
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +FD+ V+ ++W ++++G+ G EAL F M+++ V + S++ C
Sbjct: 250 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLC 309
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRTLVSW 284
AN+ L +H V+K F + + L+ YS+C + A ++F+ +VSW
Sbjct: 310 ANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSW 369
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I GF N EA+ F+ M+++G +P+ +++ LTA +I + ++K
Sbjct: 370 TAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKT 426
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y S + ++D Y + G++++A V + K + V ++LA G+ A
Sbjct: 427 NYERSSTVG--TALLDAYVKLGKVDEAAKVFSGIDNK-DIVAWSAMLAGYAQAGETEAAI 483
Query: 405 RLMKYLVDLDPGVDSN---YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
++ L GV N + + N+ AA G GK G I+ + SS+ +
Sbjct: 484 KIFSELT--KGGVKPNEFTFSSILNVCAATTASMGQGK---QFHGFAIKSRLD-SSLCVS 537
Query: 462 SGIHEFMAGDRSHIES-EHIYSML---ELLSFDLKLCGY 496
S + M + HIES E ++ +L+S++ + GY
Sbjct: 538 SALLT-MYAKKGHIESAEEVFKRQREKDLVSWNSMISGY 575
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +FD+ P RD S+T+LL GF + G +EA F +Q G+E D SVL A
Sbjct: 50 AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ G +H +K F D+V V +L+D Y + + R VF M +R +V+W ++
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+A N E L F MQ EG +P+ +F AL + G+ GL+ ++ K
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK-NG 228
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ I +++LY + G + A + + +K
Sbjct: 229 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK 262
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 262/467 (56%), Gaps = 44/467 (9%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
+ V W + IS + +G +A F M P+ T T++S CA S + LG
Sbjct: 169 IKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQ--SGSIELG 226
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + G N +V NA+ID Y +
Sbjct: 227 RQVHSWINDHGFGSNLKIV--------------------------------NALIDLYSK 254
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++E+A + + + +D ISW L+ G+ ++EAL F+EM SG P+ VT++S+
Sbjct: 255 CGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 314
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN------TLIDLYSRCGCIEFARQVF-Q 274
L ACA++G + IG WIH Y+ K+ V V N +LID+Y++CG I+ A QV
Sbjct: 315 LPACAHLGAIDIGRWIHVYIDKK--LKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDS 372
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
R+L +WN++I GFA++G A + F+ M+K G +PD ++F G L+ACSH+G+++
Sbjct: 373 SAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDL 432
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAAC 394
G F M++ Y ++P++EHYGC++DL +G ++A ++ MPM+P+ V+ SLL AC
Sbjct: 433 GRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKAC 492
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK-P 453
+ G++ L E K L+ ++P +YVLL+N+YA GKW+ KIR + +G++KK P
Sbjct: 493 KIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVP 552
Query: 454 GLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
G SSIEI S +HEF+ GD+ H ++ IY MLE + L+ G+VP+T
Sbjct: 553 GCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDT 599
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/333 (35%), Positives = 185/333 (55%), Gaps = 6/333 (1%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W H S A + M G PN TF LL CA S+ G IHG
Sbjct: 43 WNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK--SKTFKEGQQIHGH 100
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V KLG D + + V T+L+ MYA+ GR++ A VFD + ++ A+I GY RG IES
Sbjct: 101 VLKLGFDLD-LYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIES 159
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +MFDE+P++D +SW A+++G+ + G +++ALE F+EM + V+PD T+ +V++ACA
Sbjct: 160 AQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQ 219
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G++ +G +H ++ F N+K+ N LIDLYS+CG +E A ++ + + + ++SWN++
Sbjct: 220 SGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTL 279
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR---YFDIMKK 344
I G+ EAL F M + G P+ V+ L AC+H G I+ G Y D K
Sbjct: 280 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLK 339
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
V+ ++D+Y++ G ++ A V ++
Sbjct: 340 GVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDS 372
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 146/380 (38%), Gaps = 102/380 (26%)
Query: 131 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 190
F + A VF+ + + WN M G+ D SA++++ M IS
Sbjct: 22 FDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVM-----ISL------- 69
Query: 191 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
G+ P++ T +L +CA T G IH +VLK F ++
Sbjct: 70 -------------------GLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDL 110
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKR------------------------------- 279
V +LI +Y++ G +E A++VF R R
Sbjct: 111 YVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIK 170
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+VSWN++I G+A G +ALE F M K KPD + ++AC+ +G IE G +
Sbjct: 171 DVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVH 230
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK------------------ 381
+ + ++ ++DLYS+ G +E A ++E + K
Sbjct: 231 SWIND-HGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLY 289
Query: 382 ----------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGV-----DSN 420
PN+V + S+L AC G I + + Y+ GV S
Sbjct: 290 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSL 349
Query: 421 YVLLANMYAAVGKWDGAGKI 440
L +MYA G D A ++
Sbjct: 350 RTSLIDMYAKCGDIDAAPQV 369
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+ +A VF+ + + + WN + G A++ AL+ + M G P+ +F L +
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMKPN 383
C+ + ++G + I + ++ ++ Y ++ +Y++ GRLEDA V + + +
Sbjct: 85 CAKSKTFKEGQQ---IHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHR-D 140
Query: 384 EVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD-SNYVLLANMYAAVGKWDGAGKIRR 442
V +L+ ++G I A+++ D P D ++ + + YA G + A ++ +
Sbjct: 141 VVSYTALITGYASRGYIESAQKMF----DEIPIKDVVSWNAMISGYAETGNYKKALELFK 196
Query: 443 TMKGRGIQKKPGLS-------------SIEIGSGIHEFM 468
M + KP S SIE+G +H ++
Sbjct: 197 EMMKTNV--KPDESTMATVVSACAQSGSIELGRQVHSWI 233
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 248/449 (55%), Gaps = 21/449 (4%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S V V W I+ + + G +A + M G P+ +T I L+S CA L
Sbjct: 141 ESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGD--L 198
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
G + V GL R + + AL+DM++K G + A +FD + ++ +
Sbjct: 199 NRGKEFYEYVKANGL-RMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVS------- 250
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
++FD+M +D + W A++ G V+ ++AL F+EMQ S +PD +T+
Sbjct: 251 -----------KLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITM 299
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
I L+AC+ +G L +G+WIHRY+ K NV + +L+D+Y++CG I A VF +
Sbjct: 300 IHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQT 359
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R +++ +II G A++G A+ YFN M G PD ++F G L+AC H G+I+ G Y
Sbjct: 360 RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDY 419
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F MK + ++P+++HY +VDL RAG LE+A ++E+MPM+ + V G+LL CR G
Sbjct: 420 FSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALLFGCRMHG 479
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ L E+ K L++LDP YVLL MY W+ A + RR M RG++K PG SSI
Sbjct: 480 NVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSI 539
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELL 487
E+ + EF+ D+S ESE IY L L
Sbjct: 540 EVNGIVSEFIVRDKSRPESEKIYDCLHCL 568
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 205/461 (44%), Gaps = 92/461 (19%)
Query: 39 KSTVNPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHG---TNPNHITFITLLSGCADFP 94
K NP W +I S +A L + +M G + P+H T+ L CAD
Sbjct: 36 KGIENPNAFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLR 95
Query: 95 SQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNA 154
L G MI G V KL R++L + V NA
Sbjct: 96 LNSL--GHMILGHVFKL---------------------RLELVSHVH-----------NA 121
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
I + G++E+A ++FDE PVRD +SW L+NG+ K G E+A+E ++ M+ GV+PD
Sbjct: 122 SIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPD 181
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
VT+I ++++CA +G L G + YV + + + N L+D++S+CG I AR++F
Sbjct: 182 DVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFD 241
Query: 275 RMHKRTLVS-------------WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
+ KRT+VS WN++I G +AL F MQ PD ++
Sbjct: 242 NLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIH 301
Query: 322 ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
L+ACS G ++ G+ ++K + +S + +VD+Y++ G + +AL V + +
Sbjct: 302 CLSACSQLGALDVGIWIHRYIEK-HSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQTR 360
Query: 382 ----------------------------------PNEVVLGSLLAACRTKGDIILAER-- 405
P+E+ LL+AC G +I R
Sbjct: 361 NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSAC-CHGGMIQTGRDY 419
Query: 406 --LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
MK +L+P + +Y ++ ++ G + A K+ +M
Sbjct: 420 FSQMKSRFNLNPQL-KHYSIMVDLLGRAGLLEEADKLMESM 459
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/457 (36%), Positives = 258/457 (56%), Gaps = 41/457 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAM 103
+ WT+ IS + + +I + ALE + L G PN T+ ++L C M
Sbjct: 79 VISWTTMISAYSKC-KIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDV-----RM 132
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H + K GL+ ++V V +AL+D++AK G
Sbjct: 133 LHCGIIKEGLE-SDVYVRSALIDVFAKLG------------------------------- 160
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+ E A+ +FDEM DAI W +++ GF + + ALE F+ M+ +G + T+ SVL
Sbjct: 161 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 220
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
AC + L +G+ H +++K D ++ + N L+D+Y +CG +E AR+VF +M +R +++
Sbjct: 221 ACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDARRVFNQMKERDVIT 278
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W+++I G A NG+ EAL+ F M+ G KP+ ++ G L ACSHAGL+EDG YF MK
Sbjct: 279 WSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 338
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
K+Y ++P EHYGC++DL +AG+L+DA+ ++ M +P+ V +LL ACR + +++LA
Sbjct: 339 KLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLA 398
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E K ++ LDP Y +L+N+YA KWD +IR+ M+ GI+K+PG S IE+
Sbjct: 399 EYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQ 458
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IH F+ GD SH + + L L L GYVPET
Sbjct: 459 IHAFIIGDESHPQIVEVNKKLNQLIHRLIGIGYVPET 495
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 152/333 (45%), Gaps = 44/333 (13%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F N +I+ Y++ + A ++FD+MP R+ ISWT +++ + K ++ALE M
Sbjct: 49 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 108
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
GV P+ T SVL AC + + + +H ++K+ + +V V + LID++++ G E A
Sbjct: 109 GVRPNVYTYSSVLRACNGMSDVRM---LHCGIIKEGLESDVYVRSALIDVFAKLGEPEDA 165
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
VF M + WNSII GFA N ALE F M++ GF + + T L AC+
Sbjct: 166 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 225
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---------- 379
L+E G++ I + + +VD+Y + G LEDA V M
Sbjct: 226 ALLELGMQAH---VHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTM 282
Query: 380 ------------------------MKPNEVVLGSLLAACRTKG---DIILAERLMKYLVD 412
KPN + + +L AC G D R MK L
Sbjct: 283 ISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 342
Query: 413 LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
++PG + +Y + ++ GK D A K+ M+
Sbjct: 343 INPGRE-HYGCMIDLLGKAGKLDDAVKLLNEME 374
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 121/286 (42%), Gaps = 55/286 (19%)
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
+Q G+ D T ++ C + + G I R++ + + + N LI++Y +
Sbjct: 4 LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+ A Q+F +M +R ++SW ++I ++ +ALE M ++G +P+ +++ L A
Sbjct: 64 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123
Query: 326 CS--------HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN 377
C+ H G+I++GL +Y S ++D++++ G EDAL+V +
Sbjct: 124 CNGMSDVRMLHCGIIKEGLE-----SDVYVRSA-------LIDVFAKLGEPEDALSVFDE 171
Query: 378 M-----------------------------PMK-----PNEVVLGSLLAACRTKGDIILA 403
M MK + L S+L AC + L
Sbjct: 172 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 231
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
+ ++V D + N L+ +MY G + A ++ MK R +
Sbjct: 232 MQAHVHIVKYDQDLILNNALV-DMYCKCGSLEDARRVFNQMKERDV 276
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 253/462 (54%), Gaps = 43/462 (9%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNP--------NHITFITLLSGCADFPSQC 97
V WTS I+ + ++ + A L F T + + +++LS C+ +
Sbjct: 2082 VSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKG 2141
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
+ G +HG V K G D ++ VG L+D YAK G+ ++
Sbjct: 2142 ITEG--VHGFVVKKGFD-GSIGVGNTLMDAYAKCGQPLVSK------------------- 2179
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYV 216
++FD M +D ISW +++ + + G EALE F M + GV + V
Sbjct: 2180 ------------KVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAV 2227
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T+ +VL ACA+ G L G IH V+K D + NV V ++ID+Y +CG +E A++ F RM
Sbjct: 2228 TLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM 2287
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
++ + SW +++ G+ ++G EAL+ F M + G KP+ ++F L ACSHAGL+E+G
Sbjct: 2288 KEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGW 2347
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+F+ MK Y + P IEHYGC+VDL+ RAG L +A N+++ M MKP+ VV GSLL ACR
Sbjct: 2348 HWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRI 2407
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
++ L E + L +LDP YVLL+N+YA G+W ++R MK R + K PG S
Sbjct: 2408 HKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFS 2467
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+E+ +H F+ GD+ H E IY LE L+ +L+ GYVP
Sbjct: 2468 LVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVP 2509
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 192/331 (58%), Gaps = 4/331 (1%)
Query: 43 NP-TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP T W I + +G +A + + M G + TF ++ C +F S + LG
Sbjct: 87 NPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLS--IDLG 144
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
++HG + K G +V V L+D Y K G A VF+ MRV++ +W +I G +
Sbjct: 145 KVVHGSLIKYGFS-GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLIS 203
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
GD++ A R+FDE+P ++ +SWTA++NG+++ EEALE F+ MQ + P+ T++S+
Sbjct: 204 CGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSL 263
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
+ AC +G L +G IH Y +K + V + LID+YS+CG I+ A +VF+ M +++L
Sbjct: 264 IKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSL 323
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+WNS+I V+G EAL F+ M++ KPD ++F G L AC H +++G YF
Sbjct: 324 PTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTR 383
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDAL 372
M + Y ++P EHY C+ +LY+R+ L++A
Sbjct: 384 MTQHYGIAPIPEHYECMTELYARSNNLDEAF 414
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 216/476 (45%), Gaps = 87/476 (18%)
Query: 15 LPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLH 74
+P + + NL T + +N S W S I+ R G EA F+ +
Sbjct: 1957 VPSGREDHSNLATWFYKYVDKSNVHS-------WNSVIADLARGGDSVEALRAFSSLRKL 2009
Query: 75 GTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRM 134
G P +F + C+ L G M H G + ++ V +AL+DMY+K G++
Sbjct: 2010 GLIPTRSSFPCTIKSCSALCD--LVSGRMSHQQAFVFGFE-TDLFVSSALIDMYSKCGQL 2066
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
A +FD + +++ +W +MI GY++ ++A+ +F +
Sbjct: 2067 KDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLF--------------------KD 2106
Query: 195 YFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
+ EE E + V D V ++SVL+AC+ V GI +H +V+K+ F ++ V N
Sbjct: 2107 FLEEETEV---EDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGN 2163
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE-GFK 313
TL+D Y++CG +++VF M ++ +SWNS+I +A +G GEALE F+ M + G +
Sbjct: 2164 TLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVR 2223
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC----IVDLYSRAGRLE 369
+ V+ + L AC+HAG + G D + K+ +E+ C I+D+Y + GR+E
Sbjct: 2224 YNAVTLSAVLLACAHAGALRAGKCIHDQVIKM-----DLEYNVCVGTSIIDMYCKCGRVE 2278
Query: 370 DALNVVENMP----------------------------------MKPNEVVLGSLLAACR 395
A + M +KPN + S+LAAC
Sbjct: 2279 MAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS 2338
Query: 396 TKGDIILAER------LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
G L E MK+ D++PG++ +Y + +++ G + A + + MK
Sbjct: 2339 HAG---LVEEGWHWFNAMKHKYDIEPGIE-HYGCMVDLFGRAGCLNEAYNLIKRMK 2390
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 139/331 (41%), Gaps = 77/331 (23%)
Query: 86 LLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR 145
LL C +F IH + + GL N+ ++ L+ +Y+ GR+ A ++F ++
Sbjct: 33 LLQNCKNFKHL-----RQIHAKIIRSGLS-NDQLLTRKLIHLYSTHGRIAYAILLFYQIQ 86
Query: 146 VKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
+FT W ++ G E+AL ++
Sbjct: 87 NPCTFT-------------------------------WNLIIRANTINGLSEQALMLYKN 115
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
M G+ D T V+ AC N ++ +G +H ++K F +V V N LID Y +CG
Sbjct: 116 MVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGH 175
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGF--------------------------AVNGFV-- 297
FA +VF++M R +VSW ++I G +NG++
Sbjct: 176 TRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRN 235
Query: 298 ---GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE- 353
EALE F MQ E P+ + + AC+ G++ G D Y + IE
Sbjct: 236 QQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD-----YAIKNCIEI 290
Query: 354 --HYG-CIVDLYSRAGRLEDALNVVENMPMK 381
+ G ++D+YS+ G ++DA+ V E MP K
Sbjct: 291 GVYLGTALIDMYSKCGSIKDAIEVFETMPRK 321
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 5/187 (2%)
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+L C N L IH +++ ++ + LI LYS G I +A +F ++
Sbjct: 33 LLQNCKNFKHLR---QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+WN II +NG +AL + +M +G D +F + AC++ I+ G
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+ K Y S + ++D Y + G AL V E M ++ N V ++++ + GD+
Sbjct: 150 SLIK-YGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGLISCGDL 207
Query: 401 ILAERLM 407
A R+
Sbjct: 208 QEARRIF 214
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 253/462 (54%), Gaps = 43/462 (9%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNP--------NHITFITLLSGCADFPSQC 97
V WTS I+ + ++ + A L F T + + +++LS C+ +
Sbjct: 1209 VSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKG 1268
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
+ G +HG V K G D ++ VG L+D YAK G+ ++
Sbjct: 1269 ITEG--VHGFVVKKGFD-GSIGVGNTLMDAYAKCGQPLVSK------------------- 1306
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYV 216
++FD M +D ISW +++ + + G EALE F M + GV + V
Sbjct: 1307 ------------KVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAV 1354
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T+ +VL ACA+ G L G IH V+K D + NV V ++ID+Y +CG +E A++ F RM
Sbjct: 1355 TLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM 1414
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
++ + SW +++ G+ ++G EAL+ F M + G KP+ ++F L ACSHAGL+E+G
Sbjct: 1415 KEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGW 1474
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+F+ MK Y + P IEHYGC+VDL+ RAG L +A N+++ M MKP+ VV GSLL ACR
Sbjct: 1475 HWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRI 1534
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
++ L E + L +LDP YVLL+N+YA G+W ++R MK R + K PG S
Sbjct: 1535 HKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFS 1594
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+E+ +H F+ GD+ H E IY LE L+ +L+ GYVP
Sbjct: 1595 LVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVP 1636
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 192/332 (57%), Gaps = 4/332 (1%)
Query: 43 NP-TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP T W I + +G +A + + M G + TF ++ C +F S + LG
Sbjct: 87 NPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLS--IDLG 144
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
++HG + K G +V V L+D Y K G A VF+ MRV++ +W +I G +
Sbjct: 145 KVVHGSLIKYGFS-GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLIS 203
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
GD++ A R+FDE+P ++ +SWTA++NG+++ EEALE F+ MQ + P+ T++S+
Sbjct: 204 CGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSL 263
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
+ AC +G L +G IH Y +K + V + LID+YS+CG I+ A +VF+ M +++L
Sbjct: 264 IKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSL 323
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
+WNS+I V+G EAL F+ M++ KPD ++F G L AC H +++G YF
Sbjct: 324 PTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTR 383
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
M + Y ++P EHY C+ +LY+R+ L++A
Sbjct: 384 MTQHYGIAPIPEHYECMTELYARSNNLDEAFK 415
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 205/443 (46%), Gaps = 80/443 (18%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W S I+ R G EA F+ + G P +F + C+ L G M H
Sbjct: 1110 WNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD--LVSGRMSHQQ 1167
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
G + ++ V +AL+DMY+K G++ A +FD + +++ +W +MI GY++ ++
Sbjct: 1168 AFVFGFE-TDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADN 1226
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A+ +F + + EE E + V D V ++SVL+AC+
Sbjct: 1227 ALLLFKD--------------------FLEEETEV---EDGNNVPLDSVVMVSVLSACSR 1263
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
V GI +H +V+K+ F ++ V NTL+D Y++CG +++VF M ++ +SWNS+
Sbjct: 1264 VSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSM 1323
Query: 288 IVGFAVNGFVGEALEYFNSMQKE-GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
I +A +G GEALE F+ M + G + + V+ + L AC+HAG + G D + K+
Sbjct: 1324 IAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKM- 1382
Query: 347 RVSPRIEHYGC----IVDLYSRAGRLEDALNVVENMP----------------------- 379
+E+ C I+D+Y + GR+E A + M
Sbjct: 1383 ----DLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEA 1438
Query: 380 -----------MKPNEVVLGSLLAACRTKGDIILAER------LMKYLVDLDPGVDSNYV 422
+KPN + S+LAAC G L E MK+ D++PG++ +Y
Sbjct: 1439 LDIFYKMVRAGVKPNYITFVSVLAACSHAG---LVEEGWHWFNAMKHKYDIEPGIE-HYG 1494
Query: 423 LLANMYAAVGKWDGAGKIRRTMK 445
+ +++ G + A + + MK
Sbjct: 1495 CMVDLFGRAGCLNEAYNLIKRMK 1517
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 119/262 (45%), Gaps = 40/262 (15%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+I Y G I A+ +F ++ +W ++ G E+AL ++ M G+ D
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAAD 124
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
T V+ AC N ++ +G +H ++K F +V V N LID Y +CG FA +VF+
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFE 184
Query: 275 RMHKRTLVSWNSIIVGF--------------------------AVNGFV-----GEALEY 303
+M R +VSW ++I G +NG++ EALE
Sbjct: 185 KMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALEL 244
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE---HYG-CIV 359
F MQ E P+ + + AC+ G++ G D Y + IE + G ++
Sbjct: 245 FKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD-----YAIKNCIEIGVYLGTALI 299
Query: 360 DLYSRAGRLEDALNVVENMPMK 381
D+YS+ G ++DA+ V E MP K
Sbjct: 300 DMYSKCGSIKDAIEVFETMPRK 321
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 143/334 (42%), Gaps = 60/334 (17%)
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
SW +++ + G EAL F ++ G+ P + + +C+ + L G H+
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 1168
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
F+ ++ V + LID+YS+CG ++ AR +F + R +VSW S+I G+ N AL
Sbjct: 1169 FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNAL 1228
Query: 302 EYFNSMQKE--------GFKPDGVSFTGALTACS-----------HAGLIEDGL------ 336
F +E D V L+ACS H +++ G
Sbjct: 1229 LLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGV 1288
Query: 337 ------------------RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNV---- 374
+ FD M++ +S + ++ +Y+++G +AL V
Sbjct: 1289 GNTLMDAYAKCGQPLVSKKVFDWMEEKDDIS-----WNSMIAVYAQSGLSGEALEVFHGM 1343
Query: 375 VENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAV 431
V ++ ++ N V L ++L AC G + + + ++ +D ++ N + + +MY
Sbjct: 1344 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD--LEYNVCVGTSIIDMYCKC 1401
Query: 432 GKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
G+ + A K MK + ++ +++ G G+H
Sbjct: 1402 GRVEMAKKTFDRMKEKNVK---SWTAMVAGYGMH 1432
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 5/187 (2%)
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+L C N L IH +++ ++ + LI LYS G I +A +F ++
Sbjct: 33 LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+WN II +NG +AL + +M +G D +F + AC++ I+ G
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+ K Y S + ++D Y + G AL V E M ++ N V ++++ + GD+
Sbjct: 150 SLIK-YGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGLISCGDL 207
Query: 401 ILAERLM 407
A R+
Sbjct: 208 QEARRIF 214
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 116/249 (46%), Gaps = 13/249 (5%)
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
A ++ + K + SWNS+I A G EAL F+S++K G P SF + +CS
Sbjct: 1094 LATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCS 1153
Query: 328 HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
+ G R ++ + ++D+YS+ G+L+DA + + +P++ N V
Sbjct: 1154 ALCDLVSG-RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSW 1211
Query: 388 GSLLAAC----RTKGDIILAERLMKYLVDLDPG--VDSNYVLLANMYAAVGKWDGAGKIR 441
S++ + ++L + ++ +++ G V + V++ ++ +A + G G I
Sbjct: 1212 TSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKG-IT 1270
Query: 442 RTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLEL---LSFDLKLCGYVP 498
+ G + KK SI +G+ + + A + S+ ++ +E +S++ + Y
Sbjct: 1271 EGVHGF-VVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQ 1329
Query: 499 ETVAGELYE 507
++GE E
Sbjct: 1330 SGLSGEALE 1338
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/441 (35%), Positives = 253/441 (57%), Gaps = 3/441 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WTS IS G E F +M ++ T+L C + + +G +
Sbjct: 191 VVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETN--ISIGEQL 248
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG K G++ ++V VG A L MYAK G + A++ F+ M +W MI + G+
Sbjct: 249 HGFTVKTGMN-SSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGN 307
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A F+ MP R+ ISW A+L + + ++EE L+ + M V PD++T ++++ A
Sbjct: 308 VERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGA 367
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+ + +G I +K +V V N+ I LYSRCG IE A+ +F + ++ L+SW
Sbjct: 368 CSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISW 427
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
NSI+ G+A NG + +E F +M G KPD +++ L+ CSH+GL+++ +F+ M K
Sbjct: 428 NSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTK 487
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ +S +EH+ C+VDL+ RAG L+ AL++++ MP KPN + G+LL+ACR D +AE
Sbjct: 488 DFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHDTEMAE 547
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
MK L++L+ +Y+LLAN Y++ G+ + ++R+ MK + +QK PG S IE+ + +
Sbjct: 548 LAMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKRVQKDPGCSWIEVCNRV 607
Query: 465 HEFMAGDRSHIESEHIYSMLE 485
H F A D SH + + IY LE
Sbjct: 608 HVFTANDTSHPQVKDIYKALE 628
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 140/280 (50%), Gaps = 2/280 (0%)
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+ +HGL K G NN ++ +++DMY K + A VF + S F+WN MI GY
Sbjct: 11 IAHQLHGLSEKYGFG-NNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFSWNCMIYGY 69
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ ++ A+ F +MP RD++SW +++ F G ++L F EM I G +P+ +T
Sbjct: 70 SKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTYA 129
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
SVL+ACAN+ G +H +++ + +V V N L+D+Y++CG I+ +++VF + +
Sbjct: 130 SVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLREH 189
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+V+W S+I G A G E + F M+K+ D L C I G +
Sbjct: 190 NVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNISIGEQLH 249
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
K ++ + + +Y++ G E A E M
Sbjct: 250 GFTVKT-GMNSSVPVGNATLSMYAKCGDFEKASLAFETMA 288
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 163/388 (42%), Gaps = 71/388 (18%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W + IS G ++ F M + G PN +T+ ++LS CA+ G +
Sbjct: 90 SVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTYASVLSACANIYD--FQWGKHL 147
Query: 105 HGLVCKLG--LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
H + ++ LD V+VG L+DMYAK G +D + VF+ +R + TW ++I G
Sbjct: 148 HARIVRVEPFLD---VLVGNGLVDMYAKCGLIDASKRVFNTLREHNVVTWTSLISGIAHF 204
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G EE + F +M+ V D + ++L
Sbjct: 205 GSQ-------------------------------EEVYDIFYQMRKDCVIMDNFILATIL 233
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC------------------- 263
C + IG +H + +K +V V N + +Y++C
Sbjct: 234 GVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVI 293
Query: 264 ------------GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
G +E AR F RM +R ++SWN+++ + N F E L+ + M ++
Sbjct: 294 SWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQE 353
Query: 312 FKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
+PD ++F + ACS + + G + K+ + + + LYSR GR+E+A
Sbjct: 354 VRPDWITFVTMIGACSELAISKLGTQILSQAVKV-GLGSDVSVVNSAITLYSRCGRIEEA 412
Query: 372 LNVVENMPMKPNEVVLGSLLAACRTKGD 399
N+ +++ K N + S++ G+
Sbjct: 413 QNLFDSIQEK-NLISWNSIMGGYAQNGE 439
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 44/230 (19%)
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
AC++VG + I +H K F +N + N++ID+Y +C I A QVF R+ K +L S
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN +I G++ +G A++ F M + D VS+ ++A SH GL
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPER----DSVSWNTIISAFSHHGL------------ 105
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
I+ G V+++ + +PN + S+L+AC D
Sbjct: 106 -------HIQSLGTFVEMWIQG--------------CQPNSMTYASVLSACANIYDFQWG 144
Query: 404 ERLMKYLVDLDPGVDSNYVLLAN----MYAAVGKWDGAGKIRRTMKGRGI 449
+ L +V ++P +D VL+ N MYA G D + ++ T++ +
Sbjct: 145 KHLHARIVRVEPFLD---VLVGNGLVDMYAKCGLIDASKRVFNTLREHNV 191
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/491 (34%), Positives = 264/491 (53%), Gaps = 48/491 (9%)
Query: 22 NQNLTTTPQI-------SIQTNNS--KSTVNPT-VQWTSSISRHCRSGRIAEAALEFTRM 71
+ NL + P I ++ N ++ NP V W + +S S F +M
Sbjct: 185 SDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQM 244
Query: 72 TLHGTNPNHITFITLLSGCADF--PSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA 129
L G PN TFI++L C+ P G +H + K D ++ VGTAL+DMYA
Sbjct: 245 LLEGFKPNMFTFISVLRSCSSLLDPE----FGKQVHAHIIKNSSDDDD-FVGTALVDMYA 299
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
K ++ A V FD + RD SWT +++G
Sbjct: 300 KARCLEDAGVA-------------------------------FDRLVNRDIFSWTVIISG 328
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
+ + E+A++ FR+MQ G++P+ T+ S L+ C+++ TL G +H +K +
Sbjct: 329 YAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGD 388
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
+ V + L+DLY +CGC+E A +F+ + R +VSWN+II G++ +G +ALE F M
Sbjct: 389 IFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLS 448
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
EG PD +F G L+ACS GL+E+G + FD M KIY ++P IEHY C+VD+ RAG+
Sbjct: 449 EGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFN 508
Query: 370 DALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYA 429
+ +E M + P ++ ++L AC+ G++ E+ K L +++P +DS+Y+LL+N++A
Sbjct: 509 EVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFA 568
Query: 430 AVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSF 489
+ G+WD IR M RGI+K+PG S +E+ +H F++ D SH + IY+ L+ L
Sbjct: 569 SKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQ 628
Query: 490 DLKLCGYVPET 500
L GYVP+T
Sbjct: 629 SLMSIGYVPKT 639
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 160/343 (46%), Gaps = 48/343 (13%)
Query: 43 NP-TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP V W++ I+ + G EAA F M G PN T +L+S + L G
Sbjct: 114 NPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGD--LRYG 171
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IHG +CK G + +N +V L+ MY K ++ VF+AM +WNA++ G+
Sbjct: 172 QSIHGCICKYGFESDN-LVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYD 230
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
R+F +M LL GF +P+ T ISV
Sbjct: 231 SQTCGRGPRIFYQM----------LLEGF---------------------KPNMFTFISV 259
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L +C+++ G +H +++K D+ V L+D+Y++ C+E A F R+ R +
Sbjct: 260 LRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDI 319
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
SW II G+A +A++YF MQ+EG KP+ + L+ CSH +E+G
Sbjct: 320 FSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENG------ 373
Query: 342 MKKIYRVSPRIEHYG------CIVDLYSRAGRLEDALNVVENM 378
++++ V+ + H+G +VDLY + G +E A + + +
Sbjct: 374 -RQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL 415
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 170/382 (44%), Gaps = 67/382 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + ++ + + G + F +M T + T T+L GCA+ S L G ++H
Sbjct: 17 VSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGS--LREGKVLH 74
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L + G + + + G +L+DMY+K G V+DA++V
Sbjct: 75 ALALRSGCEIDEFL-GCSLVDMYSKCG------TVYDALKV------------------- 108
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
F ++ D ++W+A++ G ++G+ +EA E F M+ G P+ T+ S+++
Sbjct: 109 ------FTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTA 162
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
N+G L G IH + K F+ + V N LI +Y + C+E +VF+ M LVSWN
Sbjct: 163 TNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWN 222
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIED 334
+++ GF + G F M EGFKP+ +F L +CS HA +I++
Sbjct: 223 ALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKN 282
Query: 335 --------GLRYFDIMKKI-----------YRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
G D+ K V+ I + I+ Y++ + E A+
Sbjct: 283 SSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYF 342
Query: 376 ENMP---MKPNEVVLGSLLAAC 394
M +KPNE L S L+ C
Sbjct: 343 RQMQREGIKPNEYTLASCLSGC 364
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 121/229 (52%), Gaps = 2/229 (0%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A R+F MP ++ +SW ALLNG+ + G ++ L+ F +M+ + T+ +VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CAN G+L G +H L+ + + + +L+D+YS+CG + A +VF ++ +V+W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+++I G G EA E F+ M+++G +P+ + + ++ ++ G + G + K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAA 393
S + I+ +Y ++ +ED V E M P+ V +LL+
Sbjct: 181 YGFESDNLVSNPLIM-MYMKSRCVEDGNKVFEAMT-NPDLVSWNALLSG 227
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/461 (34%), Positives = 260/461 (56%), Gaps = 44/461 (9%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
+ V W S + R G EA F M + TF ++L+ C +G+
Sbjct: 329 DDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLN--------CCVVGS 380
Query: 103 M----IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
+ +HGL+ K G + N +V AL+DM
Sbjct: 381 INPKSVHGLIIKTGFE-NYKLVSNALVDM------------------------------- 408
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + GD++ A +F++M +D ISWT+L+ G+ + EE+L+ F +M+++GV PD +
Sbjct: 409 YAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIV 468
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
S+L+ACA + L G +H +K + + V N+L+ +Y++CGC++ A +F M
Sbjct: 469 ASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQV 528
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +++W +IIVG+A NG +L+++++M G +PD ++F G L ACSHAGL+++G +Y
Sbjct: 529 KDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKY 588
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M K+Y + P EHY C++DL+ R+G+L++A +++ M +KP+ V SLL+ACR
Sbjct: 589 FQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHE 648
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
++ LAER L +L+P YV+L+NMY+A KW+ KIR+ MK +GI K+PG S +
Sbjct: 649 NLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWL 708
Query: 459 EIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
EI S ++ F++ DR H IY+ ++ + +K GYVP+
Sbjct: 709 EINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPD 749
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 171/337 (50%), Gaps = 39/337 (11%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ ++ + ++G +A F M G N TF T+L+ C+ ++C G +H
Sbjct: 231 VLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCF--GEQVH 288
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G + K G +NV V +AL+DMYA + GD+
Sbjct: 289 GFIVKSGFG-SNVYVQSALVDMYA-------------------------------KCGDL 316
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
++A M + M D +SW +L+ GFV+ G EEAL F+ M ++ D T SVLN C
Sbjct: 317 KNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC 376
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
VG++ +H ++K F++ V N L+D+Y++ G ++ A VF++M ++ ++SW
Sbjct: 377 V-VGSINPKS-VHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWT 434
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKK 344
S++ G+A N E+L+ F M+ G PD L+AC+ L+E G + + D +K
Sbjct: 435 SLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKS 494
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
R S + Y +V +Y++ G L+DA + +M +K
Sbjct: 495 GLRWSQSV--YNSLVAMYAKCGCLDDADAIFVSMQVK 529
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 188/442 (42%), Gaps = 94/442 (21%)
Query: 55 HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLD 114
+C+ G EA F M L G + T ++L C+ + G MIHG V K G +
Sbjct: 137 YCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLG--LIQTGEMIHGFVVKNGFE 194
Query: 115 RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDE 174
NV V T L+DMYAK + A +F + E
Sbjct: 195 -GNVFVVTGLVDMYAKCKCVSEAEFLFKGL-----------------------------E 224
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
++ + WTA++ G+ + G +A+E FR M GVE + T ++L AC++V G
Sbjct: 225 FDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFG 284
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
+H +++K F NV V + L+D+Y++CG ++ A+ + + M +VSWNS++VGF +
Sbjct: 285 EQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRH 344
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTAC---------SHAGLIEDGLRYFDIMKKI 345
G EAL F +M K D +F L C H +I+ G + ++
Sbjct: 345 GLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVS-- 402
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK------------------------ 381
+VD+Y++ G ++ A V E M K
Sbjct: 403 ----------NALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKI 452
Query: 382 ----------PNEVVLGSLLAACRTKGDIILAERLMKYLVD-LDPGV---DSNYVLLANM 427
P++ ++ S+L+AC ++ L E + +D + G+ S Y L M
Sbjct: 453 FCDMRVTGVNPDQFIVASILSAC---AELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAM 509
Query: 428 YAAVGKWDGAGKIRRTMKGRGI 449
YA G D A I +M+ + +
Sbjct: 510 YAKCGCLDDADAIFVSMQVKDV 531
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 160/291 (54%), Gaps = 9/291 (3%)
Query: 93 FP-SQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT 151
FP + C F+ A + + ++ LL+ +K G+++ A +FD M K ++
Sbjct: 40 FPHNPCKFM-AFLRSIHTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYS 98
Query: 152 WNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV 211
WN MI Y+ G + A +FD + +I+W+++++G+ K G EA + FR M++ G
Sbjct: 99 WNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGW 158
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
+ T+ SVL C+++G + G IH +V+K F+ NV V L+D+Y++C C+ A
Sbjct: 159 KASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEF 218
Query: 272 VFQRMH--KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH- 328
+F+ + ++ V W +++ G+A NG +A+E+F M +G + + +F LTACS
Sbjct: 219 LFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSV 278
Query: 329 -AGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
A + + F I+K + + ++ +VD+Y++ G L++A N++E M
Sbjct: 279 LARCFGEQVHGF-IVKSGFGSNVYVQ--SALVDMYAKCGDLKNAKNMLETM 326
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 20/184 (10%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA-----DFPSQ 96
V + WT+ I + ++G+ + + M GT P+ ITFI LL C+ D +
Sbjct: 528 VKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRK 587
Query: 97 CLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT-WNAM 155
++G+ K G + M+ D++ + G++D A + D M VK T W ++
Sbjct: 588 YFQQMNKVYGI--KPGPEHYACMI-----DLFGRSGKLDEAKQLLDQMDVKPDATVWKSL 640
Query: 156 IDGYMRRGDIESAVR----MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV 211
+ ++E A R +F+ P+ +A+ + L N + + + + + M+ G+
Sbjct: 641 LSACRVHENLELAERAATNLFELEPM-NAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGI 699
Query: 212 --EP 213
EP
Sbjct: 700 VKEP 703
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/457 (36%), Positives = 253/457 (55%), Gaps = 36/457 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ IS + + G +EA F +M T PN TF T+LS C F LG I
Sbjct: 76 VVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSG--FELGRQI 133
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K + N++ VG++LLDMYAK G
Sbjct: 134 HSHIFKRNYE-NHIFVGSSLLDMYAK-------------------------------AGR 161
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I A +F+ +P RD +S TA+++G+ + G EEALE F +Q G+ +YVT S+L A
Sbjct: 162 IHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTA 221
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
+ + L G +H +VL+ + V + N+LID+YS+CG + +AR++F M RT++SW
Sbjct: 222 LSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISW 281
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFD-IM 342
N+++VG++ +G E ++ F M++E KPD V+F L+ CSH GL + GL FD +M
Sbjct: 282 NAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMM 341
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+ IEHYGC++DL RAGR+E+A +++ MP +P + GSLL ACR + +
Sbjct: 342 NGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNI 401
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
E + L++++P NYV+L+N+YA+ G+W+ +R M + + K+PG S IE+
Sbjct: 402 GEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQ 461
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
IH F A DRSH E ++ + L K GYVP+
Sbjct: 462 TIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPD 498
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 126/220 (57%), Gaps = 13/220 (5%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +FDEM R+ +SWTA+++G+ +RG+ EAL F +M S EP+ T +VL++C
Sbjct: 64 ARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTG 123
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G IH ++ K+++++++ V ++L+D+Y++ G I AR VF+ + +R +VS +I
Sbjct: 124 FSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAI 183
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+A G EALE F +Q+EG + V++ LTA S GL D K+++
Sbjct: 184 ISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALS-------GLAALDHGKQVHS 236
Query: 348 VSPRIE------HYGCIVDLYSRAGRLEDALNVVENMPMK 381
R E ++D+YS+ G L A + NMP++
Sbjct: 237 HVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVR 276
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 114/228 (50%), Gaps = 8/228 (3%)
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
M I G E + +LN C N + G +H +++K + V + LI LY++C C
Sbjct: 1 MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+ AR VF M +R +VSW ++I G++ GF EAL F M + +P+ +F L++
Sbjct: 61 LGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSS 120
Query: 326 CSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNE 384
C+ E G + + I K+ Y I ++D+Y++AGR+ +A V E +P + +
Sbjct: 121 CTGFSGFELGRQIHSHIFKRNY--ENHIFVGSSLLDMYAKAGRIHEARGVFECLPER--D 176
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVDLD-PGVDSNYVLLANMYAAV 431
VV S A + L E ++ L G+ SNYV A++ A+
Sbjct: 177 VV--SCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTAL 222
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 253/465 (54%), Gaps = 34/465 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W + I + ++G EA F RM G + ++ + L C + CL G +
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELG--CLDEGMRV 284
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H L+ ++GLD +NV V AL+ MY+K R+DLA+ V
Sbjct: 285 HELLVRIGLD-SNVSVMNALITMYSKCKRVDLASHV------------------------ 319
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
FDE+ R +SW A++ G + G E+A+ F MQ+ V+PD T++SV+ A
Sbjct: 320 -------FDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPA 372
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
A++ WIH Y ++ +V V LID+Y++CG + AR +F +R +++W
Sbjct: 373 LADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITW 432
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G+ +GF A+E F M+ G P+ +F L+ACSHAGL+++G YF MK+
Sbjct: 433 NAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKE 492
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P +EHYG +VDL RAG+L++A ++ MPM P V G++L AC+ ++ LAE
Sbjct: 493 DYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAE 552
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ + +L P +VLLAN+YA W ++R M+ G+QK PG S I++ + I
Sbjct: 553 ESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEI 612
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
H F +G +H +++ IYS L L ++K GYVP+T + E+D
Sbjct: 613 HTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSIHDVEDD 657
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 203/456 (44%), Gaps = 85/456 (18%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFT-RMTLH-GTNPNHITFITLLSGCADFPSQCLF 99
V V W + ++ + R+G +A A+E RM G P+ IT +++L CA+ +
Sbjct: 122 VRDRVAWNALVAGYARNG-LARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
A H + GL+ V V TA+LD Y K G + A VVFD M K+S +WNAMIDGY
Sbjct: 181 REA--HAFAIRSGLE-ELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGY 237
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ GD A+ +F+ M EE GV+ V+++
Sbjct: 238 AQNGDSREALALFNRM--------------------VEE-----------GVDVTDVSVL 266
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+ L AC +G L G+ +H +++ NV V N LI +YS+C ++ A VF + +R
Sbjct: 267 AALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRR 326
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
T VSWN++I+G A NG +A+ F MQ E KPD + + A + I D L+
Sbjct: 327 TQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALAD---ISDPLQAR 383
Query: 340 DIMKKIYRVSPRIEHY--GCIVDLYSRAGRL----------------------------- 368
I R+ + Y ++D+Y++ GR+
Sbjct: 384 WIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHG 443
Query: 369 --EDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERL---MKYLVDLDPGVDSN 420
+ A+ + E M + PNE S+L+AC G + MK L+PG++ +
Sbjct: 444 FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGME-H 502
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
Y + ++ GK D A + M PGLS
Sbjct: 503 YGTMVDLLGRAGKLDEAWAFIQKMP-----MDPGLS 533
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 156/332 (46%), Gaps = 37/332 (11%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F M+ G P TF +LL CA L G +H + G+D + + TAL +M
Sbjct: 47 FVAMSSAGAPPVLRTFTSLLKLCAARGD--LATGRAVHAQLAARGID-SEALAATALANM 103
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YAK R A R+FD MPVRD ++W AL+
Sbjct: 104 YAKCRRP-------------------------------ADARRVFDRMPVRDRVAWNALV 132
Query: 188 NGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
G+ + G A+E MQ G PD +T++SVL ACAN L H + ++
Sbjct: 133 AGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGL 192
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
++ V V ++D Y +CG I AR VF M + VSWN++I G+A NG EAL FN
Sbjct: 193 EELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNR 252
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M +EG VS AL AC G +++G+R +++ +I + + ++ +YS+
Sbjct: 253 MVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRI-GLDSNVSVMNALITMYSKCK 311
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
R++ A +V + + + +V +++ C G
Sbjct: 312 RVDLASHVFDELDRR-TQVSWNAMILGCAQNG 342
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 107/247 (43%), Gaps = 27/247 (10%)
Query: 199 ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLID 258
AL F M +G P T S+L CA G L G +H + + L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 259 LYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ-KEGFKPDGV 317
+Y++C AR+VF RM R V+WN+++ G+A NG A+E MQ +EG +PD +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 318 SFTGALTAC-----------SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
+ L AC +HA I GL +++ V+ I+D Y + G
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGL------EELVNVAT------AILDAYCKCG 210
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN 426
+ A V + MP K N V +++ GD A L +V + GVD V +
Sbjct: 211 DIRAARVVFDWMPTK-NSVSWNAMIDGYAQNGDSREALALFNRMV--EEGVDVTDVSVLA 267
Query: 427 MYAAVGK 433
A G+
Sbjct: 268 ALQACGE 274
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 262/451 (58%), Gaps = 12/451 (2%)
Query: 43 NPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP + + S I+ + + + ++ FT+M PN TF TL+ C S
Sbjct: 86 NPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVTLSSL----- 140
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ L K G + ++V ++++++++K G + LA VFD ++ W +++ GY
Sbjct: 141 EQVFTLTMKSG-NSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCS 199
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-----SGVEPDYV 216
G + +FD+MP R+ S +A+++G+V+ +F E ++ FRE++ + V+ +
Sbjct: 200 CGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGA 259
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
++SVLNAC +G G WIH YV + + ++++ LID Y++CG ++ A +VF +M
Sbjct: 260 LLVSVLNACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKM 319
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
+ + +W+++I+G A+NG ALE F M+K G KP+ V+F G LTAC+H L +
Sbjct: 320 LVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESS 379
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
R F IM + Y ++P IEHYGCIVD+ +R+G+++ AL + +M ++P+ + GSLL C
Sbjct: 380 RLFGIMSEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLM 439
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
G L +++ KYL++ DP YVLLANMYA +GKW+G ++R+ MK RG+ G S
Sbjct: 440 HGHYELGQKVGKYLIEFDPEHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVVIVYGWS 499
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
IEI +H+F A D+ + S IY +L L
Sbjct: 500 FIEIDQTLHKFSADDKCCLYSGEIYEVLSHL 530
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 109/256 (42%), Gaps = 40/256 (15%)
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
RGD A +F MP + + +++ + F+++L F +M + P+ T ++
Sbjct: 71 RGDFRYAETLFTHMPNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTL 130
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
+ +C + +L + +K +V +++I+++S+ G I ARQVF R +
Sbjct: 131 VKSCVTLSSLE---QVFTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNV 187
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQ---------------KEGFKPDGVS-------- 318
V W S++ G+ G V E + F+ M + F +GV
Sbjct: 188 VCWTSLVSGYCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKK 247
Query: 319 --------FTGA-----LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
F GA L AC+ G E+G ++ + + +E ++D Y++
Sbjct: 248 DKGRARVKFNGALLVSVLNACTVMGAFEEG-KWIHSYVEENGLEYDLELGTALIDFYAKC 306
Query: 366 GRLEDALNVVENMPMK 381
G ++DA V + M +K
Sbjct: 307 GWVKDAEKVFDKMLVK 322
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 259/458 (56%), Gaps = 38/458 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I+ H ++G + F M G P+ T+ ++L CA + Q L G I
Sbjct: 379 AVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGW--QALNCGMEI 436
Query: 105 HGLVCK--LGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
H + K +GLD VG AL+DM Y +
Sbjct: 437 HNRIIKSRMGLDS---FVGIALIDM-------------------------------YSKC 462
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G +E A ++ D + + +SW A+++GF + EEA + F +M GV+PD T ++L
Sbjct: 463 GMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATIL 522
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+ CAN+ T+ +G IH ++K++ + + + +TL+D+YS+CG ++ + +F++ R V
Sbjct: 523 DTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFV 582
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+WN+++ G+A +G EAL+ F MQ E KP+ +F L AC H GL+E GL YF M
Sbjct: 583 TWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSM 642
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
Y + P++EHY C+VD+ R+G++ AL ++E MP + + V+ +LL+ C+ G++ +
Sbjct: 643 LSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEV 702
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
AE+ ++ L+P + YVLL+N+YA G W+ K+R+ M+ G++K+PG S IEI S
Sbjct: 703 AEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKS 762
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F+ GD++H S+ IY L++L+ ++K GY+P+T
Sbjct: 763 EVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDT 800
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 163/359 (45%), Gaps = 49/359 (13%)
Query: 22 NQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHI 81
NQ + P ++Q+ N+ I + RS + EA F + G + +
Sbjct: 267 NQLFNSLPNHNLQSYNA------------IIVGYARSDKGIEALGMFRLLQKSGLGLDEV 314
Query: 82 TFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVF 141
+ CA G +HGL K L ++N+ V A+LDMY K
Sbjct: 315 SLSGAXRACAVIKGD--LEGLQVHGLSMK-SLCQSNICVANAILDMYGKC---------- 361
Query: 142 DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALE 201
G + A +F+EM RDA+SW A++ + G E+ L
Sbjct: 362 ---------------------GALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLS 400
Query: 202 CFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
F M SG+EPD T SVL ACA L G+ IH ++K + V LID+YS
Sbjct: 401 LFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYS 460
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
+CG +E A ++ R+ ++T+VSWN+II GF++ EA + F+ M + G PD ++
Sbjct: 461 KCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYAT 520
Query: 322 ALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
L C++ +E G + + I+KK + I +VD+YS+ G ++D + E P
Sbjct: 521 ILDTCANLVTVELGKQIHAQIIKKELQSDAYIS--STLVDMYSKCGNMQDFQLIFEKAP 577
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 157/327 (48%), Gaps = 31/327 (9%)
Query: 70 RMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA 129
RM GT + TF +L C+ G IHGL K+G D +V+ G+ALLDMYA
Sbjct: 148 RMGRMGTVFDRTTFAVVLKSCSSLEDHGG--GIQIHGLAVKMGFD-CDVVTGSALLDMYA 204
Query: 130 K--------------FGRMDLATV---VFDAMRVKSSFTWN-----AMIDGYMRRGDI-E 166
K F M A V +K+ F + A +D YM+ ++ +
Sbjct: 205 KCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSD 264
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
+ ++F+ +P + S+ A++ G+ + EAL FR +Q SG+ D V++ ACA
Sbjct: 265 CSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACA 324
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ GL +H +K + N+ V N ++D+Y +CG + A VF+ M R VSWN+
Sbjct: 325 VIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNA 384
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
II NG + L F M + G +PD ++ L AC+ + G+ +I +I
Sbjct: 385 IIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGM---EIHNRII 441
Query: 347 RVSPRIEHYGCI--VDLYSRAGRLEDA 371
+ ++ + I +D+YS+ G +E A
Sbjct: 442 KSRMGLDSFVGIALIDMYSKCGMMEKA 468
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 184/444 (41%), Gaps = 79/444 (17%)
Query: 72 TLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKF 131
+ T TF + C+D + C G H + L + V V L+ MY K
Sbjct: 34 SYQATPTKKKTFSHIFQECSDRKALCP--GKQAHARMI-LTEFKPTVFVTNCLIQMYIKC 90
Query: 132 GRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP-----VRDAISWTAL 186
+ A VFD M + + +WNAM+ GY RGDI A ++FD MP V + +
Sbjct: 91 SDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMG 150
Query: 187 LNGFV-KRGYFEEALECFREM-------QISGV------EPDYVTIISVLNACAN----- 227
G V R F L+ + QI G+ + D VT ++L+ A
Sbjct: 151 RMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQN 210
Query: 228 ------------VGTLGIG-LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI-EFARQVF 273
+ G+G L +H + LK DF +V + +D+Y +C + + + Q+F
Sbjct: 211 DDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLF 270
Query: 274 QRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIE 333
+ L S+N+IIVG+A + EAL F +QK G D VS +GA AC+
Sbjct: 271 NSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDL 330
Query: 334 DGLRYFDI-MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM-------------- 378
+GL+ + MK + + + + + I+D+Y + G L +A V E M
Sbjct: 331 EGLQVHGLSMKSLCQSNICVAN--AILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAA 388
Query: 379 --------------------PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD 418
M+P+E GS+L AC + + ++ G+D
Sbjct: 389 HEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLD 448
Query: 419 SNY-VLLANMYAAVGKWDGAGKIR 441
S + L +MY+ G + A K+
Sbjct: 449 SFVGIALIDMYSKCGMMEKAEKLH 472
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/395 (39%), Positives = 238/395 (60%), Gaps = 7/395 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCA----DFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTA 123
F +M + +P+ TF LL G + D P + IHG V KLG ++ V A
Sbjct: 329 FNQMRRNCVDPDGFTFTFLLKGRSRMRIDLP--LIVASDEIHGAVLKLGFC-FHLFVMNA 385
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
L+ +YA G A VF+ M +W+ ++ ++R G++E A ++FDEMP RD +SW
Sbjct: 386 LIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFDEMPERDVVSW 445
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
T +++G+ + EALE FREM+ GV PD V ++ V++AC ++G L G +HRY+ +
Sbjct: 446 TVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISACTSLGDLETGFEVHRYIDE 505
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
F V +CN LID+Y++CGC++ A QVF M +++L++WNS+I A +G +A
Sbjct: 506 NGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRV 565
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F M G +PDGV+F LTA +H G ++DG F+ M++ Y V +EHYGC+VD+
Sbjct: 566 FTLMLXSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLG 625
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
RAGRLE+A ++ +M M N+VV G+LLAACR GD+ + ER++K L++L P Y+L
Sbjct: 626 RAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEMGERVLKKLIELKPDEGGYYIL 685
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
L ++Y A G+ A ++RR M G +K G S +
Sbjct: 686 LRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 720
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 90/457 (19%), Positives = 177/457 (38%), Gaps = 102/457 (22%)
Query: 91 ADFPSQCLFLGAM--IHGLVCKLGLDRNNVMVGTALLDMYA--KFGRMDLATVVFDAMRV 146
A CL + A+ IH + L N+ +V + A G + A +F +
Sbjct: 91 ASMAEACLAMQALKLIHARAFRANL-HNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQ 149
Query: 147 KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALEC 202
++F +N +I GY + +V++F++M D ++T LL G + +
Sbjct: 150 PNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVA 209
Query: 203 FREMQISGVE-------------------PDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
E+ +GV+ P ++ S+ AC + L + IH +
Sbjct: 210 SDEIHGAGVDYDKYKTLKSYISNKVMHMLPTSQSLASMAEACLAMQALKL---IHARAFR 266
Query: 244 QDFKDNVKVCNTLIDL--YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
+ ++ V + S GC+ +A ++F ++H+ +N++I G++ + +++
Sbjct: 267 ANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSV 326
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACS---------------HAGLIEDGLRY----FDIM 342
+ FN M++ PDG +FT L S H +++ G + + +
Sbjct: 327 QLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNAL 386
Query: 343 KKIY--RVSPRIEH-------------YGCIVDLYSRAGRLEDALNVVENMP-------- 379
+Y R P H + +V + RAG LE A V + MP
Sbjct: 387 IHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFDEMPERDVVSWT 446
Query: 380 --------------------------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL 413
++P+EV + +++AC + GD+ + +Y+ +
Sbjct: 447 VMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISACTSLGDLETGFEVHRYIDEN 506
Query: 414 DPG-VDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
G + S L +MYA G D A ++ M+ + +
Sbjct: 507 GFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSL 543
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
+ L+ + ++ + P ++ S+ AC + L + IH + + ++ V +
Sbjct: 70 KTLKSYISNKVMHMLPTSQSLASMAEACLAMQALKL---IHARAFRANLHNHALVLAKIF 126
Query: 258 DL--YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
S GC+ +A ++F ++H+ +N++I G++ + ++++ FN M++ PD
Sbjct: 127 RFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPD 186
Query: 316 GVSFT 320
G +FT
Sbjct: 187 GFTFT 191
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/455 (34%), Positives = 259/455 (56%), Gaps = 34/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I+ + R+G E M P+ T ++L A+ + G IH
Sbjct: 266 VSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVD--ISKGKEIH 323
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G + GLD V V ++L+DMYAK R+ +D Y
Sbjct: 324 GCSIRQGLD-AEVYVASSLIDMYAKCTRV---------------------VDSY------ 355
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
R+F + RD ISW +++ G V+ G F+E L+ FR+M ++ ++P + S++ AC
Sbjct: 356 ----RVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPAC 411
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ TL +G +H Y+ + F +N+ + ++L+D+Y++CG I ARQ+F RM R +VSW
Sbjct: 412 AHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWT 471
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I+G A++G +A+E F M+ EG +P+ V+F LTACSHAGL+++ +YF+ M
Sbjct: 472 AMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLD 531
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ ++P +EHY + DL RAGRLE+A + + MP+ P V +LL+ACR ++ +AE+
Sbjct: 532 FGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEK 591
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ ++++DP Y+LLAN+Y+A +W A K R +++ GI+K P S IE+ + ++
Sbjct: 592 VANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVY 651
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
FMAGD SH E I +E+L ++ GYVP+T
Sbjct: 652 AFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDT 686
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 190/439 (43%), Gaps = 67/439 (15%)
Query: 44 PTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
P + W S I + G ++ F M G P+H F ++L CA L LG
Sbjct: 72 PALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMD--LNLGES 129
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKF------GRMDL-ATVVFDAM--RVKSSFTWNA 154
+HG + ++GLD ++ G AL++MY+K GR L A+ V D M R +S T +
Sbjct: 130 LHGYIIRVGLD-FDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASV 188
Query: 155 MIDGYMRR-GDIE----------------------------------------------- 166
++ R+ DIE
Sbjct: 189 LVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSM 248
Query: 167 ---SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
S ++F+ MP +D +SW ++ G + G + E L REM + ++PD T+ SVL
Sbjct: 249 SVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLP 308
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
A + G IH ++Q V V ++LID+Y++C + + +VF + +R +S
Sbjct: 309 LIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGIS 368
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WNSII G NG E L++F M KP SF+ + AC+H + G + +
Sbjct: 369 WNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYIT 428
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ I +VD+Y++ G + A + + M ++ + V +++ C G + A
Sbjct: 429 R-NGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLR-DMVSWTAMIMGCALHGHALDA 486
Query: 404 ERLMKYLVDLDPGVDSNYV 422
L + + G++ NYV
Sbjct: 487 IELFEQMK--TEGIEPNYV 503
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 130/291 (44%), Gaps = 28/291 (9%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ ++R+F+ + A++W +++ + G ++L F M SG+ PD+ SVL A
Sbjct: 58 LHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKA 117
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF-------ARQVFQRMH 277
CA + L +G +H Y+++ ++ N L+++YS+ ++ A QV M
Sbjct: 118 CAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMT 177
Query: 278 KRTL-VSWNSIIVGFAVNGFVG-EALEYFNSMQKEGFKPDGV-------SFTGALTACSH 328
+RT V S++VG EA Y S + F+ + S + AC+
Sbjct: 178 ERTRSVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNL 237
Query: 329 AGLIEDGLRYF--DIMKKIYRVSPRIE--HYGCIVDLYSRAGRLEDALNVVENM---PMK 381
I+D D ++KI+ + P + + I+ +R G + L +V M +K
Sbjct: 238 GQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLK 297
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN-YVL--LANMYA 429
P+ L S+L DI + + + + G+D+ YV L +MYA
Sbjct: 298 PDSFTLSSVLPLIAENVDISKGKEI--HGCSIRQGLDAEVYVASSLIDMYA 346
>gi|115446683|ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group]
gi|113536652|dbj|BAF09035.1| Os02g0555100 [Oryza sativa Japonica Group]
Length = 596
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/472 (36%), Positives = 260/472 (55%), Gaps = 17/472 (3%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMT------LHGTNPNHITFITLLSGCADFPSQCL 98
V + + IS R GR +EA F ++ + T ++ S CA
Sbjct: 129 VVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARH 188
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
+HG V G++ V++ A++D Y+K GR++ A VFD M ++ S +W +MI G
Sbjct: 189 L--RELHGAVVVSGME-VTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAG 245
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y R ++ AV++FD MP +DAI+WTAL++G + G E ALE F M GV P +
Sbjct: 246 YCRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFAL 305
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKD---NVKVCNTLIDLYSRCGCIEFARQVFQR 275
+S L ACA VG + G +H ++L++ NV + N LID+YS+CG + A VF R
Sbjct: 306 VSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDR 365
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M +R ++SWNS++ GF+ NG ++L F M K+ +P V+F LTACSHAGL+ DG
Sbjct: 366 MLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDG 425
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS---LLA 392
R + M+ + V PR EHY +D R +LE+A ++ + K GS LL
Sbjct: 426 RRILESMQD-HGVEPRAEHYAAFIDALGRNRQLEEASEFIKGLSSKIGLGTTGSWGALLG 484
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
AC G+I +AE + + L L+P YV+L+N+Y+A G+WD A ++R MKG+G++K
Sbjct: 485 ACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKD 544
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC-GYVPETVAG 503
S IE+ H F+A D SH E+ IY ML+ L + + G V E + G
Sbjct: 545 QAYSWIEVQRAKHMFVADDTSHHEANEIYEMLDKLFHHMFIIGGNVEELIVG 596
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 37/194 (19%)
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQK------EGFKPDGVSFTGALTACS----- 327
R +VS+N++I A +G EAL F + + + D + A +AC+
Sbjct: 127 RNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDA 186
Query: 328 ------HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
H ++ G+ IM +VD YS+AGR+EDA V + M ++
Sbjct: 187 RHLRELHGAVVVSGMEVTVIMAN------------AMVDAYSKAGRVEDARGVFDQMTIR 234
Query: 382 PNEVVLGSLLAA-CRTKGDIILAERLMKYLVDLDPGVDS-NYVLLANMYAAVGKWDGAGK 439
+ V S++A CR +L + + + D+ P D+ + L + + G+ + A +
Sbjct: 235 -DSVSWTSMIAGYCRAS---MLDDAVQVF--DMMPAQDAIAWTALISGHEQNGEEEIALE 288
Query: 440 IRRTMKGRGIQKKP 453
+ M G G+ P
Sbjct: 289 LFERMTGEGVVPTP 302
>gi|125582503|gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japonica Group]
Length = 596
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/472 (37%), Positives = 261/472 (55%), Gaps = 17/472 (3%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTL-HGTNPNHI-----TFITLLSGCADFPSQCL 98
V + + IS R GR +EA F ++ G + T ++ S CA
Sbjct: 129 VVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARH 188
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
+HG V G++ V++ A++D Y+K GR++ A VFD M ++ S +W +MI G
Sbjct: 189 L--RELHGAVVVSGME-VTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAG 245
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y R ++ AV++FD MP +DAI+WTAL++G + G E ALE F M GV P +
Sbjct: 246 YCRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFAL 305
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKD---NVKVCNTLIDLYSRCGCIEFARQVFQR 275
+S L ACA VG + G +H ++L++ NV + N LID+YS+CG + A VF R
Sbjct: 306 VSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDR 365
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M +R ++SWNS++ GF+ NG ++L F M K+ +P V+F LTACSHAGL+ DG
Sbjct: 366 MLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDG 425
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS---LLA 392
R + M+ + V PR EHY +D R +LE+A ++ + K GS LL
Sbjct: 426 RRILESMQD-HGVEPRAEHYAAFIDALGRNRQLEEASEFIKGLSSKIGLGTTGSWGALLG 484
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
AC G+I +AE + + L L+P YV+L+N+Y+A G+WD A ++R MKG+G++K
Sbjct: 485 ACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKD 544
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC-GYVPETVAG 503
S IE+ H F+A D SH E+ IY ML+ L + + G V E + G
Sbjct: 545 QAYSWIEVQRAKHMFVADDTSHHEANEIYEMLDKLFHHMFIIGGNVEELIVG 596
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 37/194 (19%)
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQK------EGFKPDGVSFTGALTACS----- 327
R +VS+N++I A +G EAL F + + + D + A +AC+
Sbjct: 127 RNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDA 186
Query: 328 ------HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
H ++ G+ IM +VD YS+AGR+EDA V + M ++
Sbjct: 187 RHLRELHGAVVVSGMEVTVIMAN------------AMVDAYSKAGRVEDARGVFDQMTIR 234
Query: 382 PNEVVLGSLLAA-CRTKGDIILAERLMKYLVDLDPGVDS-NYVLLANMYAAVGKWDGAGK 439
+ V S++A CR +L + + + D+ P D+ + L + + G+ + A +
Sbjct: 235 -DSVSWTSMIAGYCRAS---MLDDAVQVF--DMMPAQDAIAWTALISGHEQNGEEEIALE 288
Query: 440 IRRTMKGRGIQKKP 453
+ M G G+ P
Sbjct: 289 LFERMTGEGVVPTP 302
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/457 (36%), Positives = 255/457 (55%), Gaps = 41/457 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAM 103
+ WT+ IS + + +I + ALE + L PN T+ ++L C M
Sbjct: 127 VISWTTMISAYSKC-KIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV-----RM 180
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H + K GL+ ++V V +AL+D++AK G
Sbjct: 181 LHCGIIKEGLE-SDVFVRSALIDVFAKL-------------------------------G 208
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+ E A+ +FDEM DAI W +++ GF + + ALE F+ M+ +G + T+ SVL
Sbjct: 209 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
AC + L +G+ H +++K D ++ + N L+D+Y +CG +E A +VF +M +R +++
Sbjct: 269 ACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVIT 326
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W+++I G A NG+ EAL+ F M+ G KP+ ++ G L ACSHAGL+EDG YF MK
Sbjct: 327 WSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 386
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
K+Y + P EHYGC++DL +AG+L+DA+ ++ M +P+ V +LL ACR + +++LA
Sbjct: 387 KLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLA 446
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E K ++ LDP Y LL+N+YA KWD +IR M+ RGI+K+PG S IE+
Sbjct: 447 EYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQ 506
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IH F+ GD SH + + L L L GYVPET
Sbjct: 507 IHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPET 543
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 151/333 (45%), Gaps = 44/333 (13%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F N +I+ Y++ + A ++FD+MP R+ ISWT +++ + K ++ALE M
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
V P+ T SVL +C + + + +H ++K+ + +V V + LID++++ G E A
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
VF M + WNSII GFA N ALE F M++ GF + + T L AC+
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---------- 379
L+E G++ I + + +VD+Y + G LEDAL V M
Sbjct: 274 ALLELGMQAH---VHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 380 ------------------------MKPNEVVLGSLLAACRTKG---DIILAERLMKYLVD 412
KPN + + +L AC G D R MK L
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 413 LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+DP V +Y + ++ GK D A K+ M+
Sbjct: 391 IDP-VREHYGCMIDLLGKAGKLDDAVKLLNEME 422
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 111/232 (47%), Gaps = 26/232 (11%)
Query: 184 TALLNGFVKRGY---FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
T LL+ F + Y A++ +Q G+ D T ++ C + + G I R+
Sbjct: 27 TLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
+ + + + N LI++Y + + A Q+F +M +R ++SW ++I ++ +A
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACS--------HAGLIEDGLRYFDIMKKIYRVSPRI 352
LE M ++ +P+ +++ L +C+ H G+I++GL D+ +
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLES-DVFVR-------- 197
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA--ACRTKGDIIL 402
++D++++ G EDAL+V + M + + +V S++ A ++ D+ L
Sbjct: 198 ---SALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVAL 245
>gi|242054925|ref|XP_002456608.1| hypothetical protein SORBIDRAFT_03g039300 [Sorghum bicolor]
gi|241928583|gb|EES01728.1| hypothetical protein SORBIDRAFT_03g039300 [Sorghum bicolor]
Length = 458
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/447 (36%), Positives = 251/447 (56%), Gaps = 3/447 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V T++I R GR +A F+++ G PN TF T+L + G +H
Sbjct: 7 VSATAAIGALTRRGRHRDALALFSQVLADGVAPNEFTFGTVLRSATALRAP--RAGVQLH 64
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
KLGL +NV VG+ALLD YAK G M A V D R + ++ A+I G ++ G
Sbjct: 65 ACAAKLGLC-SNVFVGSALLDHYAKMGAMREAHGVLDDTREPNVVSYTALIAGLLKNGMF 123
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A R+F MP R+ +SW A++ G + G EEA+ F EM GV P+ T VL +
Sbjct: 124 DEADRLFRRMPERNVVSWNAMIGGCSQAGLSEEAVNLFLEMCREGVTPNESTFPCVLTSV 183
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN G LG+G +H +K K +V + N+L+ Y+RCG +E + F++M+++ +VSWN
Sbjct: 184 ANAGALGVGRSVHASAIKFLGKLDVYIGNSLVSFYARCGSLEDSVLAFKKMNRKNVVSWN 243
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G+A NG EAL+ + M+ G KPD V+ G L C+HAGL+++G F +
Sbjct: 244 ALICGYAQNGKGEEALDAYRMMRATGLKPDNVTLLGLLFGCNHAGLVDEGYALFKTTEME 303
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ EHY C+VDL SRA R ++A +E +P +P +L+ C+ + LAE
Sbjct: 304 QPGILKPEHYACVVDLLSRAKRFDNAKRFLEELPFEPGIGFWKALVGGCQIHWNRELAES 363
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ K + LDP S+Y+LL+N+Y+A G W IRR +K +G+++ G S IE+ +H
Sbjct: 364 VAKRIHALDPKDTSSYILLSNVYSASGSWQSVSMIRREIKEKGLKRITGCSWIEVHDKVH 423
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLK 492
F GD H +S+ IYSMLE+ + ++
Sbjct: 424 VFSNGDYRHHQSDEIYSMLEVCFYSME 450
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 40/270 (14%)
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
MP RD +S TA + +RG +AL F ++ GV P+ T +VL + + G
Sbjct: 1 MPHRDVVSATAAIGALTRRGRHRDALALFSQVLADGVAPNEFTFGTVLRSATALRAPRAG 60
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV---------------------- 272
+ +H K NV V + L+D Y++ G + A V
Sbjct: 61 VQLHACAAKLGLCSNVFVGSALLDHYAKMGAMREAHGVLDDTREPNVVSYTALIAGLLKN 120
Query: 273 ---------FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
F+RM +R +VSWN++I G + G EA+ F M +EG P+ +F L
Sbjct: 121 GMFDEADRLFRRMPERNVVSWNAMIGGCSQAGLSEEAVNLFLEMCREGVTPNESTFPCVL 180
Query: 324 TACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMK 381
T+ ++AG + G + + +++ Y +V Y+R G LED++ + M K
Sbjct: 181 TSVANAGALGVGR---SVHASAIKFLGKLDVYIGNSLVSFYARCGSLEDSVLAFKKMNRK 237
Query: 382 PNEVVLGSLLA--ACRTKGDIIL-AERLMK 408
N V +L+ A KG+ L A R+M+
Sbjct: 238 -NVVSWNALICGYAQNGKGEEALDAYRMMR 266
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 246/447 (55%), Gaps = 34/447 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S I+ + + ++A F +M G + T ++LLS C + LF G +IH
Sbjct: 224 VSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQ--PEVLFHGKLIH 281
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
++G D +++ V L+ MY+K G DI
Sbjct: 282 AHGIQVGCD-SDIQVINTLISMYSKCG-------------------------------DI 309
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
SA +FD M + +SWTA++ G+ ++G +EA+ F M+ G +PD VTIIS+++ C
Sbjct: 310 GSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGC 369
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
G L +G WI Y KDN+ VCN LID+Y++CG ++ AR++F M +++LVSW
Sbjct: 370 GQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWT 429
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G A+NG EAL F M + G KP+ ++F L AC+HAG +E G F++M K+
Sbjct: 430 TLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKV 489
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y+++P ++HY C+ DL R GRL++A ++NMP KP+ + LL+AC+ ++++ E
Sbjct: 490 YKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGEC 549
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ +L +L+P YV +AN+YA+ GKWD IR MK K PG S +++ H
Sbjct: 550 VAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSPGKSLVQVNGKTH 609
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLK 492
EF DR H E IY LE L+ +K
Sbjct: 610 EFTVEDRCHPEGLLIYETLENLALQMK 636
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 202/465 (43%), Gaps = 85/465 (18%)
Query: 28 TPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLL 87
TP + Q+ N S + QW SSI+ G +A L F +M +G PN++TF ++
Sbjct: 3 TPA-ATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVA 61
Query: 88 SGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK 147
C+ + L ++H V K + ++ V T+++DMY K ++
Sbjct: 62 KACSKLLN--LKYSQIVHTHVVKSRF-QADLFVQTSVVDMYVKCSQL------------- 105
Query: 148 SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ 207
F +N +F MP RD SW +++ GF + G+ + + F EM
Sbjct: 106 -GFAYN-----------------LFSRMPKRDVASWNSMILGFAQLGFVDRVVSLFCEMG 147
Query: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267
I G+ D VT+I + ++ ++ L + IH + +K +V V NT I Y++CG
Sbjct: 148 IEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFG 207
Query: 268 FARQVFQRMHK--RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
A VF + K +T VSWNS+I G+A +A+ +F M GF+ D + L++
Sbjct: 208 LAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSS 267
Query: 326 CS-----------HAGLIEDGL-----------------------RY-FDIMKKIYRVSP 350
C HA I+ G RY FD M RVS
Sbjct: 268 CVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVS- 326
Query: 351 RIEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTKGDIILAERLM 407
+ ++ Y+ G L++A+ + M KP+ V + SL++ C G + L + +
Sbjct: 327 ----WTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWID 382
Query: 408 KYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
Y G+ N ++ L ++YA G D A ++ TM + +
Sbjct: 383 TYAT--ANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSL 425
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 170/375 (45%), Gaps = 36/375 (9%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W S I + G + F M + G + +T I L L + IH
Sbjct: 123 WNSMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKD--LKMLESIHSF 180
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
K+G+D +V V + YAK G LA VFD ID ++ G
Sbjct: 181 GIKIGID-TDVSVSNTWIAAYAKCGEFGLAETVFDG------------IDKGLKTG---- 223
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
+SW +++ G+ +A+ F++M G D TI+S+L++C
Sbjct: 224 -------------VSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQ 270
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
L G IH + ++ +++V NTLI +YS+CG I AR +F M +T VSW ++
Sbjct: 271 PEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAM 330
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+A G + EA+ F++M+ G KPD V+ ++ C G +E G ++ D
Sbjct: 331 IAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELG-KWIDTYATANG 389
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ + ++D+Y++ G +++A + MP K + V +L+A C G+ A L
Sbjct: 390 LKDNLMVCNALIDVYAKCGSMDNARELFYTMPEK-SLVSWTTLIAGCALNGEFKEALGLF 448
Query: 408 KYLVDLDPGVDSNYV 422
+V+L G+ N++
Sbjct: 449 FQMVEL--GLKPNHI 461
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/445 (35%), Positives = 243/445 (54%), Gaps = 35/445 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S + G +A + M P+ TFI L + C + + L G +IH
Sbjct: 222 VSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN--PETLTQGRLIH 279
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
LG D+ D+ + N I Y + D
Sbjct: 280 SHAIHLGTDQ-------------------DIEAI-------------NTFISMYSKSEDT 307
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
SA +FD M R +SWT +++G+ ++G +EAL F M SG +PD VT++S+++ C
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 226 ANVGTLGIGLWIH-RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
G+L G WI R + +DNV +CN LID+YS+CG I AR +F ++T+V+W
Sbjct: 368 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G+A+NG EAL+ F+ M +KP+ ++F L AC+H+G +E G YF IMK+
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 487
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y +SP ++HY C+VDL R G+LE+AL ++ NM KP+ + G+LL AC+ ++ +AE
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAE 547
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ + L +L+P + + YV +AN+YAA G WDG +IR MK R I+K PG S I++
Sbjct: 548 QAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN 607
Query: 465 HEFMAGDRSHIESEHIYSMLELLSF 489
H F G+ H+E+E IY L LS
Sbjct: 608 HSFTVGEHGHVENEVIYFTLNGLSL 632
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 186/438 (42%), Gaps = 72/438 (16%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + +S C+SG +A F M L+ P+ +T +TL+ A F L AM H +
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQS-ASFEKSLKLLEAM-HAV 178
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+LG+D V V + Y K G +D A +VF+A+ RGD
Sbjct: 179 GIRLGVDVQ-VTVANTWISTYGKCGDLDSAKLVFEAID----------------RGD--- 218
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
R +SW ++ + G +A + M +PD T I++ +C N
Sbjct: 219 ----------RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN 268
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
TL G IH + + +++ NT I +YS+ AR +F M RT VSW +
Sbjct: 269 PETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVM 328
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+A G + EAL F++M K G KPD V+ ++ C G +E G ++ D IY
Sbjct: 329 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG-KWIDARADIYG 387
Query: 348 VS-PRIEHYGCIVDLYSRAGRLEDALNVVENMP--------------------------- 379
+ ++D+YS+ G + +A ++ +N P
Sbjct: 388 CKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLF 447
Query: 380 -------MKPNEVVLGSLLAACRTKGDIILAER---LMKYLVDLDPGVDSNYVLLANMYA 429
KPN + ++L AC G + +MK + ++ PG+D +Y + ++
Sbjct: 448 SKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLD-HYSCMVDLLG 506
Query: 430 AVGKWDGAGKIRRTMKGR 447
GK + A ++ R M +
Sbjct: 507 RKGKLEEALELIRNMSAK 524
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 170/401 (42%), Gaps = 82/401 (20%)
Query: 40 STVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
S+VN W I E+ L F M G PN+ TF + CA +
Sbjct: 15 SSVNA---WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAD--VG 69
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
M+H + K ++V VGTA +DM+ K +D A
Sbjct: 70 CCEMVHAHLIKSPF-WSDVFVGTATVDMFVKCNSVDYAA--------------------- 107
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
++F+ MP RDA +W A+L+GF + G+ ++A FREM+++ + PD VT++
Sbjct: 108 ----------KVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVM 157
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK- 278
+++ + + +L + +H ++ V V NT I Y +CG ++ A+ VF+ + +
Sbjct: 158 TLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRG 217
Query: 279 -RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS---------- 327
RT+VSWNS+ ++V G +A + M +E FKPD +F +C
Sbjct: 218 DRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRL 277
Query: 328 ------HAGLIED-------------------GLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
H G +D FDIM VS + ++ Y
Sbjct: 278 IHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVS-----WTVMISGY 332
Query: 363 SRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTKGDI 400
+ G +++AL + M KP+ V L SL++ C G +
Sbjct: 333 AEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSL 373
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 112/241 (46%), Gaps = 36/241 (14%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T V WT IS + G + EA F M G P+ +T ++L+SGC F S L
Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGS--LET 375
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G I G R+NVM+ AL+DMY+K G + A +FD K+ TW MI GY
Sbjct: 376 GKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYA 435
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
LNG F EAL+ F +M +P+++T ++
Sbjct: 436 --------------------------LNGI-----FLEALKLFSKMIDLDYKPNHITFLA 464
Query: 221 VLNACANVGTLGIGLWIHRYVLKQ--DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
VL ACA+ G+L G W + +++KQ + + + ++DL R G +E A ++ + M
Sbjct: 465 VLQACAHSGSLEKG-WEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSA 523
Query: 279 R 279
+
Sbjct: 524 K 524
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 227/368 (61%), Gaps = 2/368 (0%)
Query: 123 ALLDMYAKFGR--MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDA 180
AL+D Y K G +D A +FD M + WN+MIDGY R G ++ A +F+EMP R+
Sbjct: 217 ALIDGYGKQGGAGVDRARELFDQMTERDLVCWNSMIDGYARHGRMDEARSLFEEMPERNV 276
Query: 181 ISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
ISW+ +++G V+ G +EALE F+ M G+ PD V + ++ACA +G L G W+H Y
Sbjct: 277 ISWSIVIDGHVRCGEAKEALEHFQSMLRCGIRPDRVAAVGAVSACAQLGALEQGRWLHSY 336
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
+ K+ +V V LID+Y +CG ++ A +F+ M +R++V+WN +IVG +G+ +A
Sbjct: 337 LEKKKVLSDVVVQTALIDMYMKCGRMDLAMLIFESMPERSVVTWNVMIVGLGTHGYGLDA 396
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
+ F+ M+ E D +S LTAC+HAGL+ +GL F MKK + + P++EHYG +VD
Sbjct: 397 VMLFHRMEAERVAVDDLSLLAMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVD 456
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
L RAGRL+ A + +E MPM+P + GSLLAACR+ + LAE ++ L +L
Sbjct: 457 LLGRAGRLDQARHAIETMPMEPTPELWGSLLAACRSHSCVELAELSVERLANLGADDSGV 516
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHI 480
YVLL+N+YA G W +IR+ M G++K G S IE+ IHEF+ G SH+ ++ I
Sbjct: 517 YVLLSNIYADEGMWGDVLRIRKLMSDEGMRKDIGRSVIEVDGEIHEFVNGGGSHLCTDEI 576
Query: 481 YSMLELLS 488
Y ML LS
Sbjct: 577 YLMLWNLS 584
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 159/336 (47%), Gaps = 44/336 (13%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W ++I H GR A L F RM G P+ TF +L C P G ++H
Sbjct: 82 WNTAIRLHA-PGRPRAALLYFARMRSCGVRPDAYTFPAVLKACGCAPG--CRAGLLVHAE 138
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS--FTWNAMIDGYMRRGDI 165
+ GL + V AL+ Y + VFD S +WN+M+ GY+ G++
Sbjct: 139 AVRRGLGADLFTV-NALISFYCRILDCISGRKVFDEAGGVSRDLVSWNSMVAGYVGCGEM 197
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +FDEMP RDA SW AL++G+ K+G
Sbjct: 198 GLAQELFDEMPQRDAFSWGALIDGYGKQG------------------------------- 226
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
G G+ R + Q + ++ N++ID Y+R G ++ AR +F+ M +R ++SW+
Sbjct: 227 ------GAGVDRARELFDQMTERDLVCWNSMIDGYARHGRMDEARSLFEEMPERNVISWS 280
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+I G G EALE+F SM + G +PD V+ GA++AC+ G +E G R+ +
Sbjct: 281 IVIDGHVRCGEAKEALEHFQSMLRCGIRPDRVAAVGAVSACAQLGALEQG-RWLHSYLEK 339
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+V + ++D+Y + GR++ A+ + E+MP +
Sbjct: 340 KKVLSDVVVQTALIDMYMKCGRMDLAMLIFESMPER 375
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 115/252 (45%), Gaps = 48/252 (19%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W+ I H R G EA F M G P+ + + +S CA LGA+
Sbjct: 276 VISWSIVIDGHVRCGEAKEALEHFQSMLRCGIRPDRVAAVGAVSACAQ-------LGALE 328
Query: 105 HGLVCKLGLDR----NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G L++ ++V+V TAL+DMY K GRMDLA ++F++M +S TWN MI
Sbjct: 329 QGRWLHSYLEKKKVLSDVVVQTALIDMYMKCGRMDLAMLIFESMPERSVVTWNVMI---- 384
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G GY +A+ F M+ V D +++++
Sbjct: 385 ---------------------------VGLGTHGYGLDAVMLFHRMEAERVAVDDLSLLA 417
Query: 221 VLNACANVGTLGIGLWI-HRYVLKQDFKDNVKVCN--TLIDLYSRCGCIEFARQVFQRM- 276
+L AC + G + GL I HR +K+DF + KV + L+DL R G ++ AR + M
Sbjct: 418 MLTACTHAGLVSEGLEIFHR--MKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMP 475
Query: 277 HKRTLVSWNSII 288
+ T W S++
Sbjct: 476 MEPTPELWGSLL 487
>gi|357150569|ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 548
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 262/496 (52%), Gaps = 36/496 (7%)
Query: 26 TTTPQISIQTNNSKSTVNPTVQ-WTSSIS---RHCRSGRIAEAALEFTRMTLHGTNPNHI 81
+++PQ + +S + V WT+++S +H AEA F M G PN
Sbjct: 50 SSSPQYARAIFDSVPAASANVYLWTATVSSYAKHASPALAAEAFPLFMFMLRSGPRPNGF 109
Query: 82 TFITLLSGCADFPSQCLFLGAMIHGLVCKLGL---------------------------- 113
T ++L + + +HG + K GL
Sbjct: 110 TVSSVLKSLSKL--RAAHQVCQVHGFLVKAGLASSLHVGATLLDSYGNLCRVKDARRVFD 167
Query: 114 --DRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRM 171
R+NV+VG A++ Y K G ++ A VFD M + S +WN ++ GY+RRGD A +
Sbjct: 168 EMPRSNVVVGNAMVSGYVKAGDVEAARQVFDGMVERDSISWNTLMSGYLRRGDAGLARDL 227
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTL 231
FDEMP R+ SW +++ + G + +++ F +M+ PD T+ +++ACA +G L
Sbjct: 228 FDEMPQRNVNSWNMMISACSEVGLWADSVAVFNQMRFMSFRPDAATMAVLMSACAQLGFL 287
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
+ ++ + K + N V N+L+D++++CGC A +F M + +VS+N ++
Sbjct: 288 SVARQVYGLLRKGCVEMNCHVHNSLVDMFAKCGCFSEAHLLFAEMDPKDVVSYNVMVSAL 347
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR 351
A +G +AL+ F M + G +PD V+F G L+AC+HAGL++ G YF+ M Y +
Sbjct: 348 AHHGHGKDALKLFEQMIEGGLQPDAVTFLGVLSACAHAGLVDSGKYYFETMGTTYAIEKS 407
Query: 352 IEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
+HY C+VDLY R G +E+A V+ MP+KP+ + G+LL ACR +I + E + L+
Sbjct: 408 ADHYACMVDLYGRVGLIEEAHYFVKIMPVKPHAGIWGALLNACRKHCNIDVGEVAARELI 467
Query: 412 DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGD 471
++P NYVLL+N A +WD G +R+ M+G GI K G S +E+ S +HEF+ GD
Sbjct: 468 RIEPMNPGNYVLLSNTLAWSQQWDAVGDVRQLMRGNGIDKNTGFSWVEVESVVHEFLMGD 527
Query: 472 RSHIESEHIYSMLELL 487
SH + I +LELL
Sbjct: 528 FSHPSFDEICGILELL 543
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 172/470 (36%), Positives = 257/470 (54%), Gaps = 46/470 (9%)
Query: 43 NPTVQ---WTSSISRHCR-----SGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFP 94
+PT++ W + I H + +G F RM HG P+ TF LL A P
Sbjct: 19 HPTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFAS-P 77
Query: 95 SQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNA 154
S L LG +H + + GL + V T+L+ MY+ G +D+A
Sbjct: 78 S-LLHLGRSVHAQILRFGLAIDP-FVQTSLISMYSSSGLVDMAR---------------- 119
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV--- 211
+F MP R+ ISW+ ++NG+V+ G ++EAL FREMQ+ GV
Sbjct: 120 ---------------NLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDV 164
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
P+ T+ VL AC +G L G W H Y+ K +V + LID+Y++CG +E A
Sbjct: 165 RPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATW 224
Query: 272 VFQRM-HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
VF + + +++W+++I G A++G E + F+ M +G +P+ V+F AC H G
Sbjct: 225 VFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGG 284
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
L+ +G Y M + Y + P I+HYGC+VDLY RAGR+++A NVV++MPM+P+ +V G+L
Sbjct: 285 LVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGAL 344
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
L+ R GDI E +K L++L+P YVLL+N+YA G+W+ +R M+ GI+
Sbjct: 345 LSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIK 404
Query: 451 KKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
K PG S IE+G +HEF GD SH E+ I+ MLE + LK+ GYV T
Sbjct: 405 KVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNT 454
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 160/463 (34%), Positives = 255/463 (55%), Gaps = 39/463 (8%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGT---NPNHITFITLLSGCADFPSQC 97
V V W++ + GR+ EA F M G +P + + L CA+ C
Sbjct: 295 AVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLC 352
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L G +H L+ K GL ++ G +LL MYAK G
Sbjct: 353 L--GKQLHALLAKSGL-HTDLTAGNSLLSMYAKAGL------------------------ 385
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
I+ A +FD+M V+D +S++AL++G+V+ G +EA FR+MQ V+PD T
Sbjct: 386 -------IDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVAT 438
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH 277
++S++ AC+++ L G H V+ + +CN LID+Y++CG I+ +RQ+F M
Sbjct: 439 MVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMP 498
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
R +VSWN++I G+ ++G EA F M+ + +PD V+F ++ACSH+GL+ +G R
Sbjct: 499 ARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKR 558
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
+F +M Y ++PR+EHY +VDL +R G L++A ++ MP+K + V G+LL ACR
Sbjct: 559 WFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVH 618
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
+I L +++ + L P N+VLL+N+++A G++D A ++R K +G +K PG S
Sbjct: 619 KNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSW 678
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IEI +H F+ GDRSH +S IY L+ + D+ GY +T
Sbjct: 679 IEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADT 721
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 147/311 (47%), Gaps = 44/311 (14%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGL---VCKLGLDRNNVMVGTALLDMYAKFGRM 134
PN T + LL A + L G +H C L ++ V+VGTALLDMYAK G +
Sbjct: 227 PNASTLVALLPLLAQHGA--LSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHL 284
Query: 135 DLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRG 194
A+ R+F+ M VR+ ++W+AL+ GFV G
Sbjct: 285 VYAS-------------------------------RVFEAMAVRNEVTWSALVGGFVLCG 313
Query: 195 YFEEALECFREMQISGV---EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVK 251
EA F++M G+ P ++ S L ACAN+ L +G +H + K ++
Sbjct: 314 RMLEAFSLFKDMLAQGLCFLSP--TSVASALRACANLSDLCLGKQLHALLAKSGLHTDLT 371
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG 311
N+L+ +Y++ G I+ A +F +M + VS+++++ G+ NG EA F MQ
Sbjct: 372 AGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACN 431
Query: 312 FKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
+PD + + ACSH ++ G + ++ + ++ ++D+Y++ GR++
Sbjct: 432 VQPDVATMVSLIPACSHLAALQHGKCGHGSVI--VRGIASETSICNALIDMYAKCGRIDL 489
Query: 371 ALNVVENMPMK 381
+ + + MP +
Sbjct: 490 SRQIFDVMPAR 500
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 156/364 (42%), Gaps = 61/364 (16%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F A++D Y + A +F MP RD ++W A+L G+ G + + + C MQ
Sbjct: 165 FVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQ-D 223
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK----QDFKDNVKVCNTLIDLYSRCGC 265
P+ T++++L A G L G +H Y ++ D KD V V L+D+Y++CG
Sbjct: 224 DHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGH 283
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG---FKPDGVSFTGA 322
+ +A +VF+ M R V+W++++ GF + G + EA F M +G P V+ A
Sbjct: 284 LVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVA--SA 341
Query: 323 LTACSH-----------------------------------AGLIEDGLRYFDIMKKIYR 347
L AC++ AGLI+ FD M
Sbjct: 342 LRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDT 401
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAE 404
VS Y +V Y + G+ ++A V M ++P+ + SL+ AC L
Sbjct: 402 VS-----YSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLA--ALQH 454
Query: 405 RLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
+ + G+ S + L +MYA G+ D + +I M R I +++ G
Sbjct: 455 GKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVS---WNTMIAG 511
Query: 462 SGIH 465
GIH
Sbjct: 512 YGIH 515
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 138/334 (41%), Gaps = 41/334 (12%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GD+ A +FD++P + AL+ + RG + +P+ T VL
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC+ + L +H + + ++ V L+D+Y++C A VF+RM R +V
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVV 196
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+WN+++ G+A++G + + MQ + P+ + L + G + G
Sbjct: 197 AWNAMLAGYALHGKYSDTIACLLLMQDD-HAPNASTLVALLPLLAQHGALSQG------- 248
Query: 343 KKIYRVSPRI----EHYG------CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
+ ++ S R +H ++D+Y++ G L A V E M ++ NEV +L+
Sbjct: 249 RAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVR-NEVTWSALV- 306
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
G +L R+++ + L +M A G + T ++
Sbjct: 307 -----GGFVLCGRMLE-----------AFSLFKDMLA-----QGLCFLSPTSVASALRAC 345
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLEL 486
LS + +G +H +A H + S+L +
Sbjct: 346 ANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSM 379
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 154/456 (33%), Positives = 254/456 (55%), Gaps = 27/456 (5%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V WT+ I+ + R G++ EA + +M C D +Q + +I
Sbjct: 297 SVSWTTIINGYIRVGKLDEARQVYNQMP-----------------CKDITAQTALMSGLI 339
Query: 105 HG--------LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMI 156
+ ++G ++V+ +++ Y++ GRMD A +F M +K+S +WN MI
Sbjct: 340 QNGRIDEADQMFSRIGA--HDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMI 397
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
GY + G ++ A +F M ++ +SW +L+ GF++ + +AL+ M G +PD
Sbjct: 398 SGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQS 457
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T L+ACAN+ L +G +H Y+LK + +++ V N LI +Y++CG ++ A QVF+ +
Sbjct: 458 TFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDI 517
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
L+SWNS+I G+A+NG+ +A + F M E PD V+F G L+ACSHAGL GL
Sbjct: 518 ECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGL 577
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
F M + + + P EHY C+VDL R GRLE+A N V M +K N + GSLL ACR
Sbjct: 578 DIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRV 637
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
++ L + L +L+P SNY+ L+NM+A G+W+ ++R M+G+ K+PG S
Sbjct: 638 HKNLELGRFAAERLFELEPHNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCS 697
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
IE+ + I F++ D + + ++I +L L+ ++
Sbjct: 698 WIEVQNQIQHFLSHDPAKLRPKNIQIILNTLAAHMR 733
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 201/466 (43%), Gaps = 106/466 (22%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T V W ++ + +SG ++ A F ++ NPN ++++T+L G A
Sbjct: 200 TERNVVSWNLMVAGYVKSGDLSSAWQLFEKIP----NPNAVSWVTMLCGLA--------- 246
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
K+G+M A +FD M K+ +WNAMI Y+
Sbjct: 247 -----------------------------KYGKMAEARELFDRMPSKNVVSWNAMIATYV 277
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ ++ AV++F +MP +D++SWT ++NG+++ G +EA + + +M + +
Sbjct: 278 QDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSG 337
Query: 221 VL---------NACANVGTLGIGLW---IHRY-----------VLKQDFKDNVKVCNTLI 257
++ + +G + W I Y + +Q N NT+I
Sbjct: 338 LIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMI 397
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGV 317
Y++ G ++ A ++FQ M ++ +VSWNS+I GF N +AL+ M KEG KPD
Sbjct: 398 SGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQS 457
Query: 318 SFTGALTACSHAGLIEDGLRYFD-IMKKIYRVSPRIEHYGCIVDLYSRAGRLED------ 370
+F L+AC++ ++ G + + I+K Y + + ++ +Y++ GR++
Sbjct: 458 TFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGN--ALIAMYAKCGRVQSAEQVFR 515
Query: 371 -----------------ALNVVENMPMK-----------PNEVVLGSLLAACRTKGDIIL 402
ALN N K P+EV +L+AC G
Sbjct: 516 DIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQ 575
Query: 403 AERLMKYLVD---LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+ K +++ ++P + +Y L ++ VG+ + A R MK
Sbjct: 576 GLDIFKCMIEDFAIEP-LAEHYSCLVDLLGRVGRLEEAFNTVRGMK 620
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 135/319 (42%), Gaps = 59/319 (18%)
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
LG + + + N++ +++ + AK R+ A +FD M +++ +WN MI GY
Sbjct: 30 LGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGY 89
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ +E A +FD MP RD SW ++ + ++G E+A E + PD +
Sbjct: 90 LHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELLE------LVPDKLD-- 141
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC-----------NTLIDLYSRCGCIEF 268
AC N G Y K F D KV N+++ Y++ G +
Sbjct: 142 ---TACWNAMIAG-------YAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHL 191
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSH 328
A Q F+ M +R +VSWN ++ G+ +G + A + F + P+ VS+ L +
Sbjct: 192 ALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIP----NPNAVSWVTMLCGLAK 247
Query: 329 AGLIEDGLRYFDIMK------------------------KIYRVSPRIE--HYGCIVDLY 362
G + + FD M K+++ P + + I++ Y
Sbjct: 248 YGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGY 307
Query: 363 SRAGRLEDALNVVENMPMK 381
R G+L++A V MP K
Sbjct: 308 IRVGKLDEARQVYNQMPCK 326
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 160/357 (44%), Gaps = 48/357 (13%)
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
++L Y + G+M LA F++M ++ +WN M+ GY++ GD+ SA ++F+++P +A+
Sbjct: 177 NSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAV 236
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGV---------------------------EPD 214
SW +L G K G EA E F M V D
Sbjct: 237 SWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKD 296
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
V+ +++N VG L ++ + +D + + LI + G I+ A Q+F
Sbjct: 297 SVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLI----QNGRIDEADQMFS 352
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
R+ +V WNS+I G++ +G + EAL F M + + VS+ ++ + AG ++
Sbjct: 353 RIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIK----NSVSWNTMISGYAQAGQMDR 408
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLL 391
F M++ VS + ++ + + DAL + M KP++ L
Sbjct: 409 ATEIFQAMREKNIVS-----WNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTL 463
Query: 392 AACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMK 445
+AC + + +L +Y+ L G ++ + L MYA G+ A ++ R ++
Sbjct: 464 SACANLAALQVGNQLHEYI--LKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIE 518
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 155/335 (46%), Gaps = 22/335 (6%)
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
K G+++ A +F M K+ T+N+MI + I A ++FD+M +R+ +SW ++ G
Sbjct: 29 KLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAG 88
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
++ EEA E F M E D + ++ G L + V K +
Sbjct: 89 YLHNNMVEEASELFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPD---KLD 141
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
N +I Y++ G A++VF++M + LVS+NS++ G+ NG + AL++F SM +
Sbjct: 142 TACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTE 201
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
VS+ + +G + + F+ + +P + ++ ++ G++
Sbjct: 202 RNV----VSWNLMVAGYVKSGDLSSAWQLFEKIP-----NPNAVSWVTMLCGLAKYGKMA 252
Query: 370 DALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS-NYVLLANMY 428
+A + + MP K N V +++A + A +L K + P DS ++ + N Y
Sbjct: 253 EARELFDRMPSK-NVVSWNAMIATYVQDLQVDEAVKLFKKM----PHKDSVSWTTIINGY 307
Query: 429 AAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
VGK D A ++ M + I + L S I +G
Sbjct: 308 IRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNG 342
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/455 (33%), Positives = 256/455 (56%), Gaps = 4/455 (0%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + IS + G EA RM G + T+ +++ CA+ ++ L LG +H
Sbjct: 252 VAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACAN--ARLLQLGKQVH 309
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V L + + +L+ +Y K G+ + A +F+ M K +WNA++ GY+ G I
Sbjct: 310 AYV--LRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHI 367
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +F EM ++ +SW +++G + G+ EE L+ F M+ G EP + +C
Sbjct: 368 GEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC 427
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A +G G H ++K F ++ N LI +Y++CG +E A+QVF+ M VSWN
Sbjct: 428 AVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWN 487
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I +G EA++ + M K+G +PD ++F LTACSHAGL++ G +YF+ M+ +
Sbjct: 488 ALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETV 547
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
YR+ P +HY ++DL R+G+ +A +++E++P KP + +LL+ CR G++ L
Sbjct: 548 YRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGII 607
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
L L P D Y+LL+NMYAA G+W+ ++R+ M+ RG++K+ S IE+ + +H
Sbjct: 608 AADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVH 667
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F+ D SH E+E +Y L+ L +++ GYVP+T
Sbjct: 668 TFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDT 702
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 150/363 (41%), Gaps = 53/363 (14%)
Query: 90 CADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS 149
C L L +HG + G + + + L+D+Y K +D A +FD +
Sbjct: 22 CLPLRRTSLQLARAVHGNIITFGF-QPHAHILNRLIDVYCKSSELDYARQLFDEISEPDK 80
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPV--RDAISWTALLNGFVKRGYFEEALECFREMQ 207
M+ GY GDI A +F+E PV RD + + A++ GF A+ F +M+
Sbjct: 81 IARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMK 140
Query: 208 ISGVEPDYVTIISVLNACA-NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC--- 263
G +PD T SVL A V + H LK V N L+ +YSRC
Sbjct: 141 HEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASS 200
Query: 264 --------------------------------GCIEFARQVFQRMHKR-TLVSWNSIIVG 290
GC + +++ + M + LV++N++I G
Sbjct: 201 PSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISG 260
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
+ G EALE M G + D ++ + AC++A L++ G K+++
Sbjct: 261 YVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLG-------KQVHAYVL 313
Query: 351 RIEHYG-----CIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
R E + +V LY + G+ +A + E MP K + V +LL+ + G I A+
Sbjct: 314 RREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKL 372
Query: 406 LMK 408
+ K
Sbjct: 373 IFK 375
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC--ADFPSQCL-FLG 101
+V W + I+ + G EA + M G P+ ITF+T+L+ C A Q +
Sbjct: 483 SVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFN 542
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDGYM 160
+M G D L+D+ + G+ A + +++ K ++ W A++ G
Sbjct: 543 SMETVYRIPPGADHY-----ARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCR 597
Query: 161 RRGDIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
G++E +A ++F +P D ++ L N + G +EE + M+ GV+ +
Sbjct: 598 VHGNMELGIIAADKLFGLIPEHDG-TYMLLSNMYAATGQWEEVARVRKLMRDRGVKKE 654
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 253/465 (54%), Gaps = 37/465 (7%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ RM +P+ T+ +L+ + F S+ G + + K G + V + T L+D
Sbjct: 859 YVRMLRDSVSPSSYTYSSLVKA-SSFASR---FGESLQAHIWKFGFGFH-VKIQTTLIDF 913
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTW-------------------------------NAMI 156
Y+ GR+ A VFD M + W N +I
Sbjct: 914 YSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 973
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
+GYM G++E A +F++MPV+D ISWT ++ G+ + + EA+ F +M G+ PD V
Sbjct: 974 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 1033
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T+ +V++ACA++G L IG +H Y L+ F +V + + L+D+YS+CG +E A VF +
Sbjct: 1034 TMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNL 1093
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
K+ L WNSII G A +GF EAL+ F M+ E KP+ V+F TAC+HAGL+++G
Sbjct: 1094 PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR 1153
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
R + M Y + +EHYG +V L+S+AG + +AL ++ NM +PN V+ G+LL CR
Sbjct: 1154 RIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRI 1213
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK-PGL 455
++++AE L+ L+P Y LL +MYA +W +IR M+ GI+K PG
Sbjct: 1214 HKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGT 1273
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
SSI I H F A D+SH S+ + +L+ + + L GYV ET
Sbjct: 1274 SSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQET 1318
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 138/347 (39%), Gaps = 75/347 (21%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ AV +M + + AL GFV + +LE + M V P T S++ A
Sbjct: 821 LDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA 880
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
+ G L H + K F +VK+ TLID YS G I AR+VF M +R ++W
Sbjct: 881 SSFASRFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAW 938
Query: 285 NSIIVGFA--------------------------VNGFVG-------------------- 298
+++ + +NG++G
Sbjct: 939 TTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDII 998
Query: 299 ----------------EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDI 341
EA+ F M +EG PD V+ + ++AC+H G++E G +
Sbjct: 999 SWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYT 1058
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
++ + + I +VD+YS+ G LE AL V N+P K N S++ G
Sbjct: 1059 LQNGFVLDVYIG--SALVDMYSKCGSLERALLVFFNLP-KKNLFCWNSIIEGLAAHG--- 1112
Query: 402 LAERLMKYLVDLD-PGVDSNYVLLANMYAA---VGKWDGAGKIRRTM 444
A+ +K ++ V N V +++ A G D +I R+M
Sbjct: 1113 FAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 1159
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 165/457 (36%), Positives = 255/457 (55%), Gaps = 41/457 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAM 103
+ WT+ IS + + +I + ALE + L PN T+ ++L C M
Sbjct: 127 VISWTTMISAYSKC-KIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV-----RM 180
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H + K GL+ ++V V +AL+D++AK G
Sbjct: 181 LHCGIIKEGLE-SDVFVRSALIDVFAKL-------------------------------G 208
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+ E A+ +FDEM DAI W +++ GF + + ALE F+ M+ +G + T+ SVL
Sbjct: 209 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
AC + L +G+ H +++K D ++ + N L+D+Y +CG +E A +VF +M +R +++
Sbjct: 269 ACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVIT 326
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W+++I G A NG+ EAL+ F M+ G KP+ ++ G L ACSHAGL+EDG YF MK
Sbjct: 327 WSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 386
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
K+Y + P EHYGC++DL +AG+L+DA+ ++ M +P+ V +LL ACR + +++LA
Sbjct: 387 KLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLA 446
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E K ++ LDP Y LL+N+YA KWD +IR M+ RGI+K+PG S IE+
Sbjct: 447 EYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQ 506
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IH F+ GD SH + + L L L GYVPET
Sbjct: 507 IHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPET 543
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 151/333 (45%), Gaps = 44/333 (13%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F N +I+ Y++ + A ++FD+MP R+ ISWT +++ + K ++ALE M
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
V P+ T SVL +C + + + +H ++K+ + +V V + LID++++ G E A
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
VF M + WNSII GFA N ALE F M++ GF + + T L AC+
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---------- 379
L+E G++ I + + +VD+Y + G LEDAL V M
Sbjct: 274 ALLELGMQAH---VHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 380 ------------------------MKPNEVVLGSLLAACRTKG---DIILAERLMKYLVD 412
KPN + + +L AC G D R MK L
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 413 LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+DP V +Y + ++ GK D A K+ M+
Sbjct: 391 IDP-VREHYGCMIDLLGKAGKLDDAVKLLNEME 422
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 111/232 (47%), Gaps = 26/232 (11%)
Query: 184 TALLNGFVKRGY---FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
T LL+ F + Y A++ +Q G+ D T ++ C + + G I R+
Sbjct: 27 TLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
+ + + + N LI++Y + + A Q+F +M +R ++SW ++I ++ +A
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACS--------HAGLIEDGLRYFDIMKKIYRVSPRI 352
LE M ++ +P+ +++ L +C+ H G+I++GL D+ +
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLES-DVFVR-------- 197
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA--ACRTKGDIIL 402
++D++++ G EDAL+V + M + + +V S++ A ++ D+ L
Sbjct: 198 ---SALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVAL 245
>gi|326522570|dbj|BAK07747.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/456 (36%), Positives = 261/456 (57%), Gaps = 36/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAM 103
V W S I + +G +AA F M G PN +T +L+ C D + L LG
Sbjct: 197 VVSWNSMIKAYQAAGMKDDAARMFRAMVAEGAVPPNAVTVAVVLAACRD--AGDLALGRW 254
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+ V +G++ + +VG+AL+ MY K G M
Sbjct: 255 LEEWVKSVGMEVGS-LVGSALVGMYEKCGEM----------------------------- 284
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
A R+FD + +D ++W AL+ G+ + G +EA+ F M+ +G PD +T++ VL+
Sbjct: 285 --AEARRVFDAIAHKDNVAWNALITGYAQNGMSKEAISLFHSMRQAGARPDKITLVGVLS 342
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA VG L +G + RY L++ F NV V L+D+YS+CG + A QVF+++ + S
Sbjct: 343 ACAAVGALELGTELDRYALQRGFYSNVYVGTALVDMYSKCGDLTRAIQVFEKLPCKNEAS 402
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
WN++I G A NG EA+ F M+K EG +PD ++F G L+AC HAGL++DG R+FD +
Sbjct: 403 WNALICGLAFNGRGQEAIRQFELMRKQEGLRPDDITFIGVLSACVHAGLLKDGRRWFDSL 462
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
+++ P+IEHY C+VDL +RAG LE+A + +E +P KP+ V+LG+LLAACR ++ +
Sbjct: 463 TSEFQIIPKIEHYSCMVDLLARAGHLEEAWDFIEKIPGKPDAVMLGALLAACRKCKNVEV 522
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
+ R++ ++ L+P NYV+ + +YA+ + D + ++R M+ RG+ K PG S IE+
Sbjct: 523 SVRVINKIMLLEPSNSWNYVVSSKIYASSDRLDDSARMRGLMRERGVSKIPGCSWIEVSG 582
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498
+ EF AGD E +Y +L+ L +++L GYVP
Sbjct: 583 RVLEFYAGDEPQHGVEDMYQLLDTLVDEMRLEGYVP 618
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 132/244 (54%), Gaps = 7/244 (2%)
Query: 151 TWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG 210
T ++++ Y G +A R+FD + RD +SW +++ + G ++A FR M G
Sbjct: 168 TVHSLVTMYSNLGRPRAARRVFDGILRRDVVSWNSMIKAYQAAGMKDDAARMFRAMVAEG 227
Query: 211 -VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
V P+ VT+ VL AC + G L +G W+ +V + V + L+ +Y +CG + A
Sbjct: 228 AVPPNAVTVAVVLAACRDAGDLALGRWLEEWVKSVGMEVGSLVGSALVGMYEKCGEMAEA 287
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
R+VF + + V+WN++I G+A NG EA+ F+SM++ G +PD ++ G L+AC+
Sbjct: 288 RRVFDAIAHKDNVAWNALITGYAQNGMSKEAISLFHSMRQAGARPDKITLVGVLSACAAV 347
Query: 330 GLIEDG--LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
G +E G L + + + Y + +VD+YS+ G L A+ V E +P K NE
Sbjct: 348 GALELGTELDRYALQRGFYS---NVYVGTALVDMYSKCGDLTRAIQVFEKLPCK-NEASW 403
Query: 388 GSLL 391
+L+
Sbjct: 404 NALI 407
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 40/294 (13%)
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
P A S+ L F L+ M + + PD T+ +L A A
Sbjct: 93 PTPTAFSFNVALR-FFAASRPRTTLQLSLRMLRAALRPDAYTLPFLLLAAARCPAPAFAA 151
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
H + K ++ ++L+ +YS G AR+VF + +R +VSWNS+I + G
Sbjct: 152 SAHALLQKLGLHNHDHTVHSLVTMYSNLGRPRAARRVFDGILRRDVVSWNSMIKAYQAAG 211
Query: 296 FVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAG------LIEDGLRYFDI------- 341
+A F +M EG P+ V+ L AC AG +E+ ++ +
Sbjct: 212 MKDDAARMFRAMVAEGAVPPNAVTVAVVLAACRDAGDLALGRWLEEWVKSVGMEVGSLVG 271
Query: 342 ------------MKKIYRVSPRIEH-----YGCIVDLYSRAGRLEDALNVVENMPM---K 381
M + RV I H + ++ Y++ G ++A+++ +M +
Sbjct: 272 SALVGMYEKCGEMAEARRVFDAIAHKDNVAWNALITGYAQNGMSKEAISLFHSMRQAGAR 331
Query: 382 PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN-YV--LLANMYAAVG 432
P+++ L +L+AC G + L L +Y L G SN YV L +MY+ G
Sbjct: 332 PDKITLVGVLSACAAVGALELGTELDRYA--LQRGFYSNVYVGTALVDMYSKCG 383
>gi|242096286|ref|XP_002438633.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
gi|241916856|gb|EER90000.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
Length = 529
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 241/417 (57%), Gaps = 6/417 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + + R GR A M G P+ +T +T ++ C+ L LG I
Sbjct: 113 VLWNMMMRCYIRCGRFTAAVALAEEMERSGATPDRVTLVTAVTACSRAGD--LSLGRRIR 170
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ G+ ++ V ALLDMY K G ++ A +F M ++ +W ++ GY G +
Sbjct: 171 AYM--DGVFGFSLPVANALLDMYTKNGYLEEAVKMFQQMPERNIISWTILVSGYAVAGQL 228
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A +F + +D I WTA++N V+ G FEEAL FR+MQ+ VEPD T++++L C
Sbjct: 229 DKARMLFYQCTQKDLILWTAMINACVQHGSFEEALTLFRDMQLQRVEPDKFTVVTLLTCC 288
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN+G L G WIH+Y ++ K + + LI++YS+CG ++ + Q+F RM R +W
Sbjct: 289 ANIGALDQGEWIHQYAEGRNMKIDAVLGTALIEMYSKCGHVDKSLQIFGRMQGRDAAAWT 348
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+II G A NG +ALE F MQ+ KPDG++F G L AC H GL+++G R+F MK+I
Sbjct: 349 AIICGLATNGQASKALELFEEMQRSKTKPDGITFIGVLNACCHGGLVDEGRRHFQAMKEI 408
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL-GSLLAACRTKGDIILAE 404
Y++ PRIEHY C+V+L AG L +A ++ +MP+ + + L G+LL AC+ G++ ++E
Sbjct: 409 YQIEPRIEHYSCLVNLLGHAGLLYEAEKLIRDMPVNNDTMPLFGALLTACKAYGNVEMSE 468
Query: 405 RLMKYLVDLDPGVDSNY-VLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
RL K + D + + VL++N+YA +W+ + ++R M ++K G S IE+
Sbjct: 469 RLTKRIAKEDCSQNPDVNVLMSNVYATASRWEESIRVRSKMTHPAVKKTAGCSMIEV 525
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 149/312 (47%), Gaps = 46/312 (14%)
Query: 143 AMRVKSSFTWNA-----MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
A VK+ F W+A +++ Y G ++ A ++FDEMP R + W ++ +++ G F
Sbjct: 70 AAAVKTGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRFLVLWNMMMRCYIRCGRFT 129
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
A+ EM+ SG PD VT+++ + AC+ G L +G I Y + F ++ V N L+
Sbjct: 130 AAVALAEEMERSGATPDRVTLVTAVTACSRAGDLSLGRRIRAY-MDGVFGFSLPVANALL 188
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA-LEYFNSMQKEGFKPDG 316
D+Y++ G +E A ++FQ+M +R ++SW ++ G+AV G + +A + ++ QK D
Sbjct: 189 DMYTKNGYLEEAVKMFQQMPERNIISWTILVSGYAVAGQLDKARMLFYQCTQK-----DL 243
Query: 317 VSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVE 376
+ +T + AC G E+ L F M ++ RV P D VV
Sbjct: 244 ILWTAMINACVQHGSFEEALTLFRDM-QLQRVEP-------------------DKFTVV- 282
Query: 377 NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNY-VLLANMYAAVGKWD 435
+LL C G + E + +Y + +D+ L MY+ G D
Sbjct: 283 ------------TLLTCCANIGALDQGEWIHQYAEGRNMKIDAVLGTALIEMYSKCGHVD 330
Query: 436 GAGKIRRTMKGR 447
+ +I M+GR
Sbjct: 331 KSLQIFGRMQGR 342
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 158/345 (45%), Gaps = 24/345 (6%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A + MP+RD L+ +RG F + + +++ G+ D T VL A
Sbjct: 2 ATACYHAMPLRDC---NVLIRTLARRGSFARVMAVYYDLRARGLVADSYTYPFVLRAIGV 58
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ G +H +K F+ + ++L+++Y+ G ++FAR+VF M +R LV WN +
Sbjct: 59 MKLSVEGRKVHAAAVKTGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRFLVLWNMM 118
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
+ + G A+ M++ G PD V+ A+TACS AG + G R M ++
Sbjct: 119 MRCYIRCGRFTAAVALAEEMERSGATPDRVTLVTAVTACSRAGDLSLGRRIRAYMDGVFG 178
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
S + + ++D+Y++ G LE+A+ + + MP + N + L++ G + A L
Sbjct: 179 FSLPVAN--ALLDMYTKNGYLEEAVKMFQQMPER-NIISWTILVSGYAVAGQLDKARMLF 235
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK-----------PGLS 456
D + + + N G ++ A + R M+ + ++ +
Sbjct: 236 YQCTQKDLIL---WTAMINACVQHGSFEEALTLFRDMQLQRVEPDKFTVVTLLTCCANIG 292
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
+++ G IH++ G I++ +++E+ S CG+V +++
Sbjct: 293 ALDQGEWIHQYAEGRNMKIDAVLGTALIEMYS----KCGHVDKSL 333
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 25/233 (10%)
Query: 18 QQNPNQN------LTTTPQISIQTNNSK-----STVNPTVQWTSSISRHCRSGRIAEAAL 66
QQ P +N L + ++ Q + ++ T + WT+ I+ + G EA
Sbjct: 205 QQMPERNIISWTILVSGYAVAGQLDKARMLFYQCTQKDLILWTAMINACVQHGSFEEALT 264
Query: 67 EFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRN---NVMVGTA 123
F M L P+ T +TLL+ CA+ + L G IH + RN + ++GTA
Sbjct: 265 LFRDMQLQRVEPDKFTVVTLLTCCANIGA--LDQGEWIH----QYAEGRNMKIDAVLGTA 318
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR----D 179
L++MY+K G +D + +F M+ + + W A+I G G A+ +F+EM D
Sbjct: 319 LIEMYSKCGHVDKSLQIFGRMQGRDAAAWTAIICGLATNGQASKALELFEEMQRSKTKPD 378
Query: 180 AISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNACANVGTL 231
I++ +LN G +E F+ M +I +EP ++N + G L
Sbjct: 379 GITFIGVLNACCHGGLVDEGRRHFQAMKEIYQIEPRIEHYSCLVNLLGHAGLL 431
>gi|147841473|emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
Length = 396
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 160/423 (37%), Positives = 250/423 (59%), Gaps = 42/423 (9%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGL-VCKLGLDRN---NVMVGTALLDMYAKFGR 133
PB IT T+LS CA LG + GL + KL ++N N++V TA+L+MY K G
Sbjct: 4 PBEITLATVLSICAK-------LGDLEMGLRIKKLXDNKNLGSNMIVSTAMLEMYVKCGA 56
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR 193
+D DG + +FD M RD + W+A++ G+ +
Sbjct: 57 VD---------------------DGRL----------VFDHMARRDVVXWSAMIAGYAQN 85
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
G EALE F M+ + ++P+ VT++SVL+ACA +G++ G I YV + NV V
Sbjct: 86 GRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVA 145
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
+ L+ +YS+CG I ARQ+F ++ +R V+WNS+I+G A+NGF +A+ +N M++ K
Sbjct: 146 SALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVK 205
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
P+ ++F G LTAC+HAG +E GL +F M+ + +SP IEH+ CIVDL+ R+GRL DA
Sbjct: 206 PNNITFVGLLTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYE 265
Query: 374 VVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGK 433
+ M ++PN V+ G+LL+A R ++ LAE K L++L+P NYV+L+N+YA+ +
Sbjct: 266 FICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASASR 325
Query: 434 WDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493
W A K+R+ MK + +QK S +E+ +H+F+ GD SH S+ +YS ++ L+
Sbjct: 326 WQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPRSDEVYSTIDGLALLSTW 385
Query: 494 CGY 496
GY
Sbjct: 386 VGY 388
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 97/178 (54%), Gaps = 13/178 (7%)
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
EPB +T+ +VL+ CA +G L +GL I + ++ N+ V ++++Y +CG ++ R
Sbjct: 3 EPBEITLATVLSICAKLGDLEMGLRIKKLXDNKNLGSNMIVSTAMLEMYVKCGAVDDGRL 62
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
VF M +R +V W+++I G+A NG EALE F M+ KP+ V+ L+AC+ G
Sbjct: 63 VFDHMARRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGS 122
Query: 332 IEDGLR---YFD---IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPN 383
+E G R Y + ++ +Y S ++ +YS+ G + A + + +P + N
Sbjct: 123 VETGERIGSYVESRGLISNVYVASA-------LLGMYSKCGNIIKARQIFDKLPQRDN 173
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 115/246 (46%), Gaps = 36/246 (14%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W++ I+ + ++GR EA F M PN +T +++LS CA S + G I
Sbjct: 72 VVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGS--VETGERI 129
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
V GL +NV V +ALL MY+K G + A +FD + + + TWN+MI G G
Sbjct: 130 GSYVESRGL-ISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGF 188
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
E A+ +++ M +E+++ +P+ +T + +L A
Sbjct: 189 AEDAIALYNRM----------------------------KEIEV---KPNNITFVGLLTA 217
Query: 225 CANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLV 282
C + G + +GL R + + N++ ++DL+ R G + A + RM + +V
Sbjct: 218 CTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVV 277
Query: 283 SWNSII 288
W +++
Sbjct: 278 IWGTLL 283
>gi|354805230|gb|AER41645.1| CRR4 [Oryza punctata]
Length = 632
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 254/443 (57%), Gaps = 12/443 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S + + SG A F M N +++ T+++G A G M+
Sbjct: 182 VSWNSIVGVYMSSGDATGAMGLFEAMP----ERNVVSWNTVVAGFAR-------TGDMVT 230
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ N + ++ YA G ++ A VFD M K +W AM+ Y + GD+
Sbjct: 231 ARTVFDRMPSRNAVSWNLMISGYATSGDVEAARSVFDRMDQKDVVSWTAMVSAYAKIGDL 290
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLNA 224
++A +FD MPV++ +SW A++ G+ ++EAL F+ M + G PD T++SV++A
Sbjct: 291 DTAKELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSA 350
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA +G++ WI ++ K + V + N LID++++CG + A+ +F +M R +++W
Sbjct: 351 CAQLGSVEYCNWISSFIGKSNTHLTVALGNALIDMFAKCGDVGRAQSIFYKMETRCIITW 410
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I GFA NG EAL +N+M +EG + DG F AL AC+H GL+++G F+ M +
Sbjct: 411 TTMISGFAFNGLCREALLVYNNMCREGVELDGTVFIAALAACTHGGLLQEGWSIFNEMVE 470
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + PR+EHYGC+VDL RAG L++A+ +E+MP++P+ V+ +LL++C G+ L E
Sbjct: 471 QYNIQPRMEHYGCVVDLLGRAGNLQEAILFIESMPLEPSVVIWVTLLSSCVAHGNAELIE 530
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ K + +L+P S VL++N A G+WDG R +M+ GI+K PG S I++GS +
Sbjct: 531 YVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIGARTSMRNWGIEKVPGSSLIQVGSEV 590
Query: 465 HEFMAGDRSHIESEHIYSMLELL 487
HEF+A D H + IY ++ L
Sbjct: 591 HEFLAKDTRHERRKEIYETVDGL 613
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 129/274 (47%), Gaps = 21/274 (7%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCA--DFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALL 125
+ M G PN TF LL CA P C +HG + + G ++V V AL+
Sbjct: 98 YVAMRAQGVPPNGFTFTFLLRACALLGLPRPC----GCVHGQIVRCGFG-SDVFVQNALM 152
Query: 126 DMYAKFGRMDLATV-----VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDA 180
D+Y + G V VFD M K +WN+++ YM GD A+ +F+ MP R+
Sbjct: 153 DVYYRCGGGGAGGVGAARQVFDEMVDKDVVSWNSIVGVYMSSGDATGAMGLFEAMPERNV 212
Query: 181 ISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRY 240
+SW ++ GF + G A F M + V+ +++ A G + R
Sbjct: 213 VSWNTVVAGFARTGDMVTARTVFDRMP----SRNAVSWNLMISGYATSGDVEAA----RS 264
Query: 241 VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
V + + +V ++ Y++ G ++ A+++F M + LVSWN++I G+ N EA
Sbjct: 265 VFDRMDQKDVVSWTAMVSAYAKIGDLDTAKELFDHMPVKNLVSWNAMITGYNHNSRYDEA 324
Query: 301 LEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIE 333
L F M EG F+PD + ++AC+ G +E
Sbjct: 325 LRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVE 358
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 248/422 (58%), Gaps = 7/422 (1%)
Query: 40 STVNPTVQ-WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
T NP + + S I + G + L F++M G P+ TF LL C+
Sbjct: 66 QTQNPNLLLFNSMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDN-- 123
Query: 99 FLGAMIHGLVCKLGLDR-NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
+G +HG+V +G +R +++ +G ++D+Y GRM+ A VFD M + WN MI
Sbjct: 124 RIGKGVHGVVIVVGFERFSSIRIG--IIDLYTSCGRMEDAKKVFDEMLDRDVIVWNMMIR 181
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
G+ + GDIE R+F +M R +SW +++ G + G EALE FREM G EPD T
Sbjct: 182 GFCKVGDIEMGFRLFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDAT 241
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDF-KDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
++++L CA +G + +G WIH Y +D + V N+L+D Y +CG +E A +VF M
Sbjct: 242 VVTILPVCARLGAVDVGEWIHSYAESSRLLRDFISVGNSLVDFYCKCGILETAWRVFNEM 301
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
++ +VSWN++I G NG + F M +G +P+ +F G L+ C+HAGL+E G
Sbjct: 302 PQKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGR 361
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
F M +++ P++EH+GC+VDL +R G +E+A ++V MPM+PN V+ GSLL+A RT
Sbjct: 362 NLFTSMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRT 421
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
GD+ AE +K L++L+P NYVLL+N+YA GKWD K+R MK + I+K PG S
Sbjct: 422 IGDVKHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQS 481
Query: 457 SI 458
+
Sbjct: 482 MV 483
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 136/316 (43%), Gaps = 16/316 (5%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH + + L ++N ++ + + + +M A +VF + + +N+MI GY G
Sbjct: 28 IHAHILRHHLHQSNQIL-SHFISVCGALDKMGYANLVFHQTQNPNLLLFNSMIKGYSLCG 86
Query: 164 DIESAVRMFDEMPVR----DAISWTALL---NGFVKRGYFEEALECFREMQISGVEPDYV 216
E+++ +F +M R D ++ LL +G + + +
Sbjct: 87 PSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGVHGVVIVVGFERFSSIRI 146
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
II + +C + + V + +V V N +I + + G IE ++F++M
Sbjct: 147 GIIDLYTSCGRMEDA-------KKVFDEMLDRDVIVWNMMIRGFCKVGDIEMGFRLFRQM 199
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
R++VSWNS+I G +G GEALE F M GF+PD + L C+ G ++ G
Sbjct: 200 RDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARLGAVDVGE 259
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
+ + I +VD Y + G LE A V MP K N V ++++
Sbjct: 260 WIHSYAESSRLLRDFISVGNSLVDFYCKCGILETAWRVFNEMPQK-NVVSWNAMISGLTF 318
Query: 397 KGDIILAERLMKYLVD 412
G L L + +++
Sbjct: 319 NGKGELGADLFEEMIN 334
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 24/251 (9%)
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE---FARQVFQRMHKRTLVSWNSIIVGFAV 293
IH ++L+ + ++ + I S CG ++ +A VF + L+ +NS+I G+++
Sbjct: 28 IHAHILRHHLHQSNQILSHFI---SVCGALDKMGYANLVFHQTQNPNLLLFNSMIKGYSL 84
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE 353
G +L F+ M+ G PD +F L +CS G+ ++ + I R
Sbjct: 85 CGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCS--GICDNRIGKGVHGVVIVVGFERFS 142
Query: 354 HYGC-IVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD 412
I+DLY+ GR+EDA V + M + + +V ++ GDI + RL + +
Sbjct: 143 SIRIGIIDLYTSCGRMEDAKKVFDEM-LDRDVIVWNMMIRGFCKVGDIEMGFRLFRQM-- 199
Query: 413 LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPG-----------LSSIEIG 461
D V S ++A + + G+ A ++ R M G + L ++++G
Sbjct: 200 RDRSVVSWNSMIAGLEQS-GRDGEALELFREMWDHGFEPDDATVVTILPVCARLGAVDVG 258
Query: 462 SGIHEFMAGDR 472
IH + R
Sbjct: 259 EWIHSYAESSR 269
>gi|356514477|ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 526
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/437 (37%), Positives = 253/437 (57%), Gaps = 10/437 (2%)
Query: 55 HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGC-ADFPSQ-CLFLGAMIHGLVCKLG 112
CRS A + + M +G N+ TF L+ C A PS +G ++HG V K G
Sbjct: 83 QCRSPLHAVSC--YLSMLQNGVAVNNYTFPPLIKACIALLPSSPSNIVGRLVHGHVVKFG 140
Query: 113 LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMF 172
L RN+ V +A ++ Y+ +D A V+FD K AM+DGY + G+++SA +F
Sbjct: 141 L-RNDPYVVSAFIEFYSVSREVDTARVLFDETSYKDVVLGTAMVDGYGKMGNVKSAREVF 199
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
D+MP R+A+SW+A++ + + F+E L F EMQ G EP+ +++VL ACA++G L
Sbjct: 200 DKMPERNAVSWSAMMAAYSRVSDFKEVLALFTEMQNEGTEPNESILVTVLTACAHLGALT 259
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
GLW+H Y + + N + L+D+YS+CGC+E A VF + + +WN++I G A
Sbjct: 260 QGLWVHSYARRFHLESNPILATALVDMYSKCGCVESALSVFDCIVDKDAGAWNAMISGEA 319
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
+NG G++L+ F M KP+ +F LTAC+HA +++ GL F+ M +Y V PR+
Sbjct: 320 LNGDAGKSLQLFRQMAASRTKPNETTFVAVLTACTHAKMVQQGLWLFEEMSSVYGVVPRM 379
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKY 409
EHY C++DL SRAG +E+A +E + V G+LL ACR +I + R+ K
Sbjct: 380 EHYACVIDLLSRAGMVEEAEKFMEEKMGGLTAGDANVWGALLNACRIHKNIHVGNRVWKK 439
Query: 410 LVDLDPGVDSNYVLLANMYAAVGKWD-GAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFM 468
LVD+ +VL N+Y G WD A K+R ++ G++KKPG S IE+ + + EF+
Sbjct: 440 LVDMGVTDCGTHVLTYNIYREAG-WDVEANKVRSRIEEVGMKKKPGCSIIEVDNEVEEFL 498
Query: 469 AGDRSHIESEHIYSMLE 485
AGD SH +++ + +L+
Sbjct: 499 AGDHSHPQAQEMCKLLD 515
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ ++ + R E FT M GT PN +T+L+ CA + L G +H
Sbjct: 208 VSWSAMMAAYSRVSDFKEVLALFTEMQNEGTEPNESILVTVLTACAHLGA--LTQGLWVH 265
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ L+ N ++ TAL+DMY+K G ++ A VFD + K + WNAMI G GD
Sbjct: 266 SYARRFHLESNPIL-ATALVDMYSKCGCVESALSVFDCIVDKDAGAWNAMISGEALNGDA 324
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
++L+ FR+M S +P+ T ++VL AC
Sbjct: 325 -------------------------------GKSLQLFRQMAASRTKPNETTFVAVLTAC 353
Query: 226 ANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
+ + GLW+ + ++ +IDL SR G +E A + +
Sbjct: 354 THAKMVQQGLWLFEEMSSVYGVVPRMEHYACVIDLLSRAGMVEEAEKFMEE 404
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 44/248 (17%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC-- 225
A +F + R+ ++ G+++ A+ C+ M +GV + T ++ AC
Sbjct: 59 ARSIFRHLTNRNTFMHNTMIRGYLQCRSPLHAVSCYLSMLQNGVAVNNYTFPPLIKACIA 118
Query: 226 ------ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS------------------ 261
+N+ +G +H +V+K +++ V + I+ YS
Sbjct: 119 LLPSSPSNI----VGRLVHGHVVKFGLRNDPYVVSAFIEFYSVSREVDTARVLFDETSYK 174
Query: 262 -------------RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
+ G ++ AR+VF +M +R VSW++++ ++ E L F MQ
Sbjct: 175 DVVLGTAMVDGYGKMGNVKSAREVFDKMPERNAVSWSAMMAAYSRVSDFKEVLALFTEMQ 234
Query: 309 KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
EG +P+ LTAC+H G + GL ++ + S I +VD+YS+ G +
Sbjct: 235 NEGTEPNESILVTVLTACAHLGALTQGLWVHSYARRFHLESNPILATA-LVDMYSKCGCV 293
Query: 369 EDALNVVE 376
E AL+V +
Sbjct: 294 ESALSVFD 301
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 156/458 (34%), Positives = 256/458 (55%), Gaps = 34/458 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W + I+ ++G + L F M G P+ T+ ++L CA S L G M+
Sbjct: 417 SVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRS--LEYGLMV 474
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V K GL ++ V + ++DMY K G
Sbjct: 475 HDKVIKSGLG-SDAFVASTVVDMYCKCGI------------------------------- 502
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A ++ D + + +SW A+L+GF EEA + F EM G++PD+ T +VL+
Sbjct: 503 IDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDT 562
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CAN+ T+ +G IH ++KQ+ D+ + +TL+D+Y++CG + + VF+++ KR VSW
Sbjct: 563 CANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSW 622
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G+A++G EAL F MQKE P+ +F L ACSH GL +DG RYF +M
Sbjct: 623 NAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTT 682
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y++ P++EH+ C+VD+ R+ ++A+ + +MP + + V+ +LL+ C+ + D+ +AE
Sbjct: 683 HYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAE 742
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++ LDP S Y+LL+N+YA GKW + RR +K ++K+PG S IE+ S +
Sbjct: 743 LAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEM 802
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
H F+ GD++H S +Y ML L ++KL GY P++ +
Sbjct: 803 HGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSAS 840
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 133/263 (50%), Gaps = 1/263 (0%)
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
N V LL MYA+ A VFDAM + + +WN M+ Y GDI +AV +FD MP
Sbjct: 51 NAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMP 110
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
D +SW AL++G+ +RG F+E+++ F EM GV PD T +L +C+ + L +G+
Sbjct: 111 DPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQ 170
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H +K + +V+ + L+D+Y +C ++ A F M +R VSW + I G N
Sbjct: 171 VHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQ 230
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG 356
LE F MQ+ G S+ A +C+ + G + K S R+
Sbjct: 231 YVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTA 290
Query: 357 CIVDLYSRAGRLEDALNVVENMP 379
IVD+Y++A L DA +P
Sbjct: 291 -IVDVYAKANSLTDARRAFFGLP 312
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 162/327 (49%), Gaps = 39/327 (11%)
Query: 57 RSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRN 116
R+G EA F M + ++ + S CA+ ++ F G +H L K G D +
Sbjct: 328 RAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAE--TKGYFQGQQVHCLAIKSGFDVD 385
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
+ V A+LD+Y K A+++ Y+ +F M
Sbjct: 386 -ICVNNAVLDLYGK---------------------CKALMEAYL----------IFQGMK 413
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
+D++SW A++ + G++++ + F EM G++PD T SVL ACA + +L GL
Sbjct: 414 QKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLM 473
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H V+K + V +T++D+Y +CG I+ A+++ R+ + +VSWN+I+ GF++N
Sbjct: 474 VHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKE 533
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY- 355
EA ++F+ M G KPD +F L C++ IE G + I +I + + Y
Sbjct: 534 SEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQ---IHGQIIKQEMLDDEYI 590
Query: 356 -GCIVDLYSRAGRLEDALNVVENMPMK 381
+VD+Y++ G + D+L V E + +
Sbjct: 591 SSTLVDMYAKCGDMPDSLLVFEKVEKR 617
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 183/444 (41%), Gaps = 78/444 (17%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + +S +C+ G E+ F M G +P+ TF LL C+ L LG +
Sbjct: 114 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEE--LSLGVQV 171
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H L K GL+ + V G+AL+DMY K +D
Sbjct: 172 HALAVKTGLEID-VRTGSALVDMYGKCRSLD----------------------------- 201
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A+ F MP R+ +SW A + G V+ + LE F EMQ G+ + S +
Sbjct: 202 --DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 259
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA + L G +H + +K F + V ++D+Y++ + AR+ F + T+ +
Sbjct: 260 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 319
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA-GLIEDGLRYFDIMK 343
N+++VG G EA+ F M + + D VS +G +AC+ G + + +K
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP------------------------ 379
+ V + + ++DLY + L +A + + M
Sbjct: 380 SGFDVDICVNN--AVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTI 437
Query: 380 ----------MKPNEVVLGSLLAACRT----KGDIILAERLMKYLVDLDPGVDSNYVLLA 425
MKP++ GS+L AC + +++ ++++K + D V S V
Sbjct: 438 LHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVV--- 494
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGI 449
+MY G D A K+ + G+ +
Sbjct: 495 DMYCKCGIIDEAQKLHDRIGGQQV 518
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 156/458 (34%), Positives = 256/458 (55%), Gaps = 34/458 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W + I+ ++G + L F M G P+ T+ ++L CA S L G M+
Sbjct: 417 SVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRS--LEYGLMV 474
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V K GL ++ V + ++DMY K G
Sbjct: 475 HDKVIKSGLG-SDAFVASTVVDMYCKCGI------------------------------- 502
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A ++ D + + +SW A+L+GF EEA + F EM G++PD+ T +VL+
Sbjct: 503 IDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDT 562
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CAN+ T+ +G IH ++KQ+ D+ + +TL+D+Y++CG + + VF+++ KR VSW
Sbjct: 563 CANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSW 622
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G+A++G EAL F MQKE P+ +F L ACSH GL +DG RYF +M
Sbjct: 623 NAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTT 682
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y++ P++EH+ C+VD+ R+ ++A+ + +MP + + V+ +LL+ C+ + D+ +AE
Sbjct: 683 HYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAE 742
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++ LDP S Y+LL+N+YA GKW + RR +K ++K+PG S IE+ S +
Sbjct: 743 LAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEM 802
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
H F+ GD++H S +Y ML L ++KL GY P++ +
Sbjct: 803 HGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSAS 840
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 132/260 (50%), Gaps = 1/260 (0%)
Query: 120 VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD 179
V LL MYA+ A VFDAM + + +WN M+ Y GDI +AV +FD MP D
Sbjct: 54 VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 113
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHR 239
+SW AL++G+ +RG F+E+++ F EM GV PD T +L +C+ + L +G+ +H
Sbjct: 114 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHA 173
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
+K + +V+ + L+D+Y +C ++ A F M +R VSW + I G N
Sbjct: 174 LAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVR 233
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
LE F MQ+ G S+ A +C+ + G + K S R+ IV
Sbjct: 234 GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTA-IV 292
Query: 360 DLYSRAGRLEDALNVVENMP 379
D+Y++A L DA +P
Sbjct: 293 DVYAKANSLTDARRAFFGLP 312
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 162/327 (49%), Gaps = 39/327 (11%)
Query: 57 RSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRN 116
R+G EA F M + ++ + S CA+ ++ F G +H L K G D +
Sbjct: 328 RAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAE--TKGYFQGQQVHCLAIKSGFDVD 385
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
+ V A+LD+Y K A+++ Y+ +F M
Sbjct: 386 -ICVNNAVLDLYGK---------------------CKALMEAYL----------IFQGMK 413
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
+D++SW A++ + G++++ + F EM G++PD T SVL ACA + +L GL
Sbjct: 414 QKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLM 473
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H V+K + V +T++D+Y +CG I+ A+++ R+ + +VSWN+I+ GF++N
Sbjct: 474 VHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKE 533
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY- 355
EA ++F+ M G KPD +F L C++ IE G + I +I + + Y
Sbjct: 534 SEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQ---IHGQIIKQEMLDDEYI 590
Query: 356 -GCIVDLYSRAGRLEDALNVVENMPMK 381
+VD+Y++ G + D+L V E + +
Sbjct: 591 SSTLVDMYAKCGDMPDSLLVFEKVEKR 617
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 183/444 (41%), Gaps = 78/444 (17%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + +S +C+ G E+ F M G +P+ TF LL C+ L LG +
Sbjct: 114 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEE--LSLGVQV 171
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H L K GL+ + V G+AL+DMY K +D
Sbjct: 172 HALAVKTGLEID-VRTGSALVDMYGKCRSLD----------------------------- 201
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A+ F MP R+ +SW A + G V+ + LE F EMQ G+ + S +
Sbjct: 202 --DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 259
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA + L G +H + +K F + V ++D+Y++ + AR+ F + T+ +
Sbjct: 260 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 319
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA-GLIEDGLRYFDIMK 343
N+++VG G EA+ F M + + D VS +G +AC+ G + + +K
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP------------------------ 379
+ V + + ++DLY + L +A + + M
Sbjct: 380 SGFDVDICVNN--AVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTI 437
Query: 380 ----------MKPNEVVLGSLLAACRT----KGDIILAERLMKYLVDLDPGVDSNYVLLA 425
MKP++ GS+L AC + +++ ++++K + D V S V
Sbjct: 438 LHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVV--- 494
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGI 449
+MY G D A K+ + G+ +
Sbjct: 495 DMYCKCGIIDEAQKLHDRIGGQQV 518
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 160/455 (35%), Positives = 250/455 (54%), Gaps = 35/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ IS + + R +A L F +M G +PN T +++ A C G +H
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC--GHQLH 184
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G K G D +NV VG+ALLD+Y ++ G +
Sbjct: 185 GFCVKCGFD-SNVHVGSALLDLYTRY-------------------------------GLM 212
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A +FD + R+ +SW AL+ G +R E+ALE F+ M G P + + S+ AC
Sbjct: 213 DDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGAC 272
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++ G L G W+H Y++K K NTL+D+Y++ G I AR++F R+ KR +VSWN
Sbjct: 273 SSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWN 332
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S++ +A +GF EA+ +F M++ G +P+ +SF LTACSH+GL+++G Y+++MKK
Sbjct: 333 SLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD 392
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ P HY +VDL RAG L AL +E MP++P + +LL ACR + L
Sbjct: 393 -GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAY 451
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+++ +LDP +V+L N+YA+ G+W+ A ++R+ MK G++K+P S +EI + IH
Sbjct: 452 AAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIH 511
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F+A D H + E I E + +K GYVP+T
Sbjct: 512 MFVANDERHPQREEIARKWEEVLAKIKELGYVPDT 546
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 148/318 (46%), Gaps = 40/318 (12%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
+ TLL C F + L G ++H + + + R+++++G LL+MYAK G ++ A VF+
Sbjct: 63 YNTLLKKCTVF--KLLIQGRIVHAHILQ-SIFRHDIVMGNTLLNMYAKCGSLEEARKVFE 119
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
M + TW +I GY + + P +AL
Sbjct: 120 KMPQRDFVTWTTLISGYSQH-----------DRPC--------------------DALLF 148
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
F +M G P+ T+ SV+ A A G +H + +K F NV V + L+DLY+R
Sbjct: 149 FNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR 208
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
G ++ A+ VF + R VSWN++I G A +ALE F M ++GF+P S+
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG--CIVDLYSRAGRLEDALNVVENMPM 380
ACS G +E G M K ++ + ++D+Y+++G + DA + + +
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIK---SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA- 324
Query: 381 KPNEVVLGSLLAACRTKG 398
K + V SLL A G
Sbjct: 325 KRDVVSWNSLLTAYAQHG 342
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 126/284 (44%), Gaps = 44/284 (15%)
Query: 205 EMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
+++ S + D ++L C L G +H ++L+ F+ ++ + NTL+++Y++CG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
+E AR+VF++M +R V+W ++I G++ + +AL +FN M + G+ P+ + + +
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 325 A--------CSHA---------------------------GLIEDGLRYFDIMKKIYRVS 349
A C H GL++D FD ++ VS
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 350 PRIEHYGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERL 406
+ ++ ++R E AL + + M +P+ SL AC + G + + +
Sbjct: 230 -----WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV 284
Query: 407 MKYLVDL-DPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
Y++ + V L +MYA G A KI + R +
Sbjct: 285 HAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 221/347 (63%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
NA+ID Y ++G ++ A+ +F +M +D +SWT+L+ G+ G +EEA++ F +M+ISGV
Sbjct: 80 NALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVY 139
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD + + SVL+ACA + + G IH ++K + ++ V N+L+ +Y++CG I A +
Sbjct: 140 PDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRA 199
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F M R ++SW ++IVG+A NG +L++++ M G KPD ++F G L ACSH GL+
Sbjct: 200 FDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLL 259
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
G YF+ M K+Y + P EHY C++DL R+G+L +A ++ M + P+ VV +LLA
Sbjct: 260 GSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLA 319
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
ACR ++ L E K L +L+P YV+L+NMY+A GKW+ A +IRR M+ RGI K+
Sbjct: 320 ACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKE 379
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
PG S IE S + FM+ DR+H IYS ++ + +K GYVP+
Sbjct: 380 PGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPD 426
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 119/208 (57%), Gaps = 3/208 (1%)
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
M D +SW +L+ G V+ G+ E+AL F++M+ ++ D T+ SVLN+ A++ +
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
+ +H ++K F+ V N LID+Y++ G ++ A VF +M + +VSW S++ G++ N
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIMKKIYRVSPRIE 353
G EA++ F M+ G PD ++ L+AC+ +++ G + + ++K S ++
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ +V +Y++ G + DA +NMP +
Sbjct: 181 N--SLVTMYAKCGSIVDANRAFDNMPTR 206
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/458 (34%), Positives = 256/458 (55%), Gaps = 34/458 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W + I+ ++G + L F M G P+ T+ ++L CA S L G M+
Sbjct: 459 SVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRS--LEYGLMV 516
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V K GL ++ V + ++DMY K G
Sbjct: 517 HDKVIKSGLG-SDAFVASTVVDMYCKCGI------------------------------- 544
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A ++ D + + +SW A+L+GF EEA + F EM G++PD+ T +VL+
Sbjct: 545 IDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDT 604
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CAN+ T+ +G IH ++KQ+ D+ + +TL+D+Y++CG + + VF+++ KR VSW
Sbjct: 605 CANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSW 664
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G+A++G EAL F MQKE P+ +F L ACSH GL +DG RYF +M
Sbjct: 665 NAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTT 724
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y++ P++EH+ C+VD+ R+ ++A+ + +MP + + V+ +LL+ C+ + D+ +AE
Sbjct: 725 HYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAE 784
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++ LDP S Y+LL+N+YA GKW + RR +K ++K+PG S IE+ S +
Sbjct: 785 LAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEM 844
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
H F+ GD++H S +Y ML L ++KL GY P++ +
Sbjct: 845 HGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSAS 882
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 132/260 (50%), Gaps = 1/260 (0%)
Query: 120 VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD 179
V LL MYA+ A VFDAM + + +WN M+ Y GDI +AV +FD MP D
Sbjct: 96 VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 155
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHR 239
+SW AL++G+ +RG F+E+++ F EM GV PD T +L +C+ + L +G+ +H
Sbjct: 156 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHA 215
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
+K + +V+ + L+D+Y +C ++ A F M +R VSW + I G N
Sbjct: 216 LAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVR 275
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
LE F MQ+ G S+ A +C+ + G + K S R+ IV
Sbjct: 276 GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTA-IV 334
Query: 360 DLYSRAGRLEDALNVVENMP 379
D+Y++A L DA +P
Sbjct: 335 DVYAKANSLTDARRAFFGLP 354
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 162/327 (49%), Gaps = 39/327 (11%)
Query: 57 RSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRN 116
R+G EA F M + ++ + S CA+ ++ F G +H L K G D +
Sbjct: 370 RAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAE--TKGYFQGQQVHCLAIKSGFDVD 427
Query: 117 NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP 176
+ V A+LD+Y K A+++ Y+ +F M
Sbjct: 428 -ICVNNAVLDLYGKC---------------------KALMEAYL----------IFQGMK 455
Query: 177 VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLW 236
+D++SW A++ + G++++ + F EM G++PD T SVL ACA + +L GL
Sbjct: 456 QKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLM 515
Query: 237 IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 296
+H V+K + V +T++D+Y +CG I+ A+++ R+ + +VSWN+I+ GF++N
Sbjct: 516 VHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKE 575
Query: 297 VGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY- 355
EA ++F+ M G KPD +F L C++ IE G + I +I + + Y
Sbjct: 576 SEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQ---IHGQIIKQEMLDDEYI 632
Query: 356 -GCIVDLYSRAGRLEDALNVVENMPMK 381
+VD+Y++ G + D+L V E + +
Sbjct: 633 SSTLVDMYAKCGDMPDSLLVFEKVEKR 659
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 183/444 (41%), Gaps = 78/444 (17%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + +S +C+ G E+ F M G +P+ TF LL C+ L LG +
Sbjct: 156 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEE--LSLGVQV 213
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H L K GL+ +V G+AL+DMY K +D
Sbjct: 214 HALAVKTGLE-IDVRTGSALVDMYGKCRSLD----------------------------- 243
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A+ F MP R+ +SW A + G V+ + LE F EMQ G+ + S +
Sbjct: 244 --DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 301
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA + L G +H + +K F + V ++D+Y++ + AR+ F + T+ +
Sbjct: 302 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 361
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA-GLIEDGLRYFDIMK 343
N+++VG G EA+ F M + + D VS +G +AC+ G + + +K
Sbjct: 362 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 421
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP------------------------ 379
+ V + + ++DLY + L +A + + M
Sbjct: 422 SGFDVDICVNN--AVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTI 479
Query: 380 ----------MKPNEVVLGSLLAACRT----KGDIILAERLMKYLVDLDPGVDSNYVLLA 425
MKP++ GS+L AC + +++ ++++K + D V S V
Sbjct: 480 LHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVV--- 536
Query: 426 NMYAAVGKWDGAGKIRRTMKGRGI 449
+MY G D A K+ + G+ +
Sbjct: 537 DMYCKCGIIDEAQKLHDRIGGQQV 560
>gi|125524780|gb|EAY72894.1| hypothetical protein OsI_00769 [Oryza sativa Indica Group]
Length = 569
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 161/456 (35%), Positives = 248/456 (54%), Gaps = 8/456 (1%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ +S H RSG+ A+ F M G N + LS C L G I
Sbjct: 110 AVTWTALLSAHARSGKHADVLQLFGEMQRSGCEGNAESMAVALSACPYAGDLALAKGKAI 169
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG GL + V +L+ MY K G MD A F K++ TWN +I Y G
Sbjct: 170 HGCGVVKGLMHGYLFVTNSLICMYGKLGEMDDAKKAFRDATAKNTVTWNTLITSYAAAGL 229
Query: 165 IESAVRMFDEMP------VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+ A+ + +M + +SW+A++ GF G + ALE FR MQ + P+ VT+
Sbjct: 230 CDEALDVLAQMEQIGGTVAPNVVSWSAVIGGFASSGDTDRALELFRRMQQQWLSPNVVTM 289
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+VL+AC ++ L +G +H + +K + + V N LI++Y++CG + AR+VF M
Sbjct: 290 ATVLSACVDLLALRLGRELHGHAMKAELDRHSLVENGLINMYAKCGKVSGARKVFDGMKT 349
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R L+SWNS++ G+ ++G EAL F M +PDGV+F L+AC HAG + +G R
Sbjct: 350 RDLISWNSMLAGYGMHGLCDEALALFTDMAGATVEPDGVTFVAVLSACGHAGRVTEGRRL 409
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
FD M + +++SP +EHY C+V L RAG L DA +VE MP++P+ V G+LL +CR G
Sbjct: 410 FDRMVRAHKISPSMEHYTCMVYLLGRAGLLRDASELVETMPVRPDLCVWGALLNSCRIHG 469
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
D +AE + ++ + N++L+ N+YA G WD + K+R K G++K PG S I
Sbjct: 470 DAAMAEATIANVLQSEDQSTGNHMLITNLYAMCGMWDESKKVRVMTKEAGLRKNPGQSWI 529
Query: 459 EIGSGIHEFMAGDR--SHIESEHIYSMLELLSFDLK 492
E+ + + F AG + +E ++ ML+ L +++
Sbjct: 530 EVDNKVVAFAAGSAPPNLTGAEDVFGMLDDLYAEME 565
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 173/380 (45%), Gaps = 54/380 (14%)
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRV-KSSFTWNAMIDG 158
+ + +H LGL + + G +L Y++ GR A VFDAM +++F WNA+I
Sbjct: 26 VASAVHAHALHLGLHAQHDVAGQ-ILAAYSRLGRAADARRVFDAMPPGRTTFHWNALISA 84
Query: 159 YMRRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
Y D ++A F M DA++WTALL+ + G + L+ F EMQ SG E +
Sbjct: 85 YSSGCDPDAARDAFARMAAAGTRPDAVTWTALLSAHARSGKHADVLQLFGEMQRSGCEGN 144
Query: 215 YVTIISVLNACANVGTLGI--GLWIHRY-VLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
++ L+AC G L + G IH V+K + V N+LI +Y + G ++ A++
Sbjct: 145 AESMAVALSACPYAGDLALAKGKAIHGCGVVKGLMHGYLFVTNSLICMYGKLGEMDDAKK 204
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG--FKPDGVSFTGALTACSHA 329
F+ + V+WN++I +A G EAL+ M++ G P+ VS++ + + +
Sbjct: 205 AFRDATAKNTVTWNTLITSYAAAGLCDEALDVLAQMEQIGGTVAPNVVSWSAVIGGFASS 264
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
G + L F M++ + + PN V + +
Sbjct: 265 GDTDRALELFRRMQQQW---------------------------------LSPNVVTMAT 291
Query: 390 LLAACRTKGDIILAERL----MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+L+AC + L L MK +D V++ + NMYA GK GA K+ MK
Sbjct: 292 VLSACVDLLALRLGRELHGHAMKAELDRHSLVENGLI---NMYAKCGKVSGARKVFDGMK 348
Query: 446 GRGIQKKPGLSSIEIGSGIH 465
R + +S+ G G+H
Sbjct: 349 TRDLIS---WNSMLAGYGMH 365
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 248/448 (55%), Gaps = 34/448 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ ++ + + G+ F RM PN TF ++S CA+F L G +H
Sbjct: 284 VSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFAR--LKWGEQLH 341
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V +G N + V +++ +Y+K G ++
Sbjct: 342 AHVLCVGF-VNALSVANSIMTLYSKCG-------------------------------EL 369
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
S ++F M RD I+W+ ++ + + GY EEA E M+ G +P+ + SVL+ C
Sbjct: 370 ASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVC 429
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++ L G +H +VL + VC+ LI +Y++CG I A ++F K ++SW
Sbjct: 430 GSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWT 489
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G+A +G EA+E F ++QK G +PD V+F G LTACSHAG+++ G YF+ M K
Sbjct: 490 AMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKD 549
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y ++P EHYGC++DL RAGRL DA ++ +MP++ ++VV +LL ACR GD+ +R
Sbjct: 550 YHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQR 609
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
++ LDP ++ LAN++AA GKW A IR MK +G+ K+PG SS+++ +
Sbjct: 610 AAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVF 669
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKL 493
F++GDRSH + E IY++LE L+ +++
Sbjct: 670 AFVSGDRSHPQGEDIYNILEELASGMEI 697
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 185/431 (42%), Gaps = 71/431 (16%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ IS + S +EA F++M L ++L L+ G +H
Sbjct: 81 VSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLY-GTNLH 139
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G K GL N+V VG+ALLDM YM+ G+I
Sbjct: 140 GFSVKXGL-VNSVFVGSALLDM-------------------------------YMKIGEI 167
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ ++FDEMP R+A++WTA++ G V+ GY E L F M S VE D L A
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A+ G L G IH LK+ F +N V N+L +Y++CG +++ F++M +VSW
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWT 287
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIED 334
+I+ + G L+ F M+ P+ +F+ ++ C+ HA ++
Sbjct: 288 TIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCV 347
Query: 335 G-LRYFDIMKKIYRVSPR------------------IEHYGCIVDLYSRAGRLEDALNVV 375
G + + I + + I + I+ YS+ G E+A +
Sbjct: 348 GFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYL 407
Query: 376 ENMPM---KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYA 429
M KPNE L S+L+ C + + ++L ++ L G++ ++ L MYA
Sbjct: 408 SRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHV--LSVGLEQTSMVCSALIIMYA 465
Query: 430 AVGKWDGAGKI 440
G A KI
Sbjct: 466 KCGSIAEASKI 476
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 109/221 (49%), Gaps = 4/221 (1%)
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTI 218
++ ++ A +FD++P RD +SWT +++G+V EAL F +M++ S + D +
Sbjct: 60 VKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLL 119
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
L C G +H + +K ++V V + L+D+Y + G I + +VF M
Sbjct: 120 SLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPT 179
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR- 337
R V+W ++I G G+ L YF+ M + + D ++ AL A + +G + G
Sbjct: 180 RNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSI 239
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+ +KK + + + + + +Y++ G+L+ L+ M
Sbjct: 240 HTQTLKKGFDENSFVAN--SLTTMYNKCGKLDYGLHTFRKM 278
>gi|115467246|ref|NP_001057222.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|51535413|dbj|BAD37283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595262|dbj|BAF19136.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|125596589|gb|EAZ36369.1| hypothetical protein OsJ_20697 [Oryza sativa Japonica Group]
Length = 602
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 223/373 (59%), Gaps = 8/373 (2%)
Query: 133 RMDLATVVF-----DAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
R DLA V+F A+ V S W M+ G R G ++ A +FD MP R+ +SW +++
Sbjct: 146 RPDLARVLFRTSGGGALDVVS---WTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMI 202
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
+G+VK F +ALE F EM+ GVE + S L AC G LG G I+R+V + +
Sbjct: 203 SGYVKADRFLDALEVFDEMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIE 262
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
+ K+ ++D+Y +CGC++ A VF + R L +WN +I GFAV+G +ALE F+ M
Sbjct: 263 VDAKLATAVVDMYCKCGCVDEAWGVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQM 322
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+ G PD V+ LTAC+HAG + +G RY + + + + P+ EHYGC+VDL+ RAG+
Sbjct: 323 EAAGVAPDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQ 382
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
L++A V++ MPM P+ VLG+LL AC+ GD+ L E + ++DLDP YVLLAN+
Sbjct: 383 LDEAKKVIDEMPMDPDLAVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANL 442
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
A G+WD GK+RR M R + K+ G S IE+ EF G+ H ++ IY+M +
Sbjct: 443 LAGAGRWDEVGKVRRLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDM 502
Query: 488 SFDLKLCGYVPET 500
++ GYVP+T
Sbjct: 503 VSRIRAEGYVPDT 515
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 117/238 (49%), Gaps = 14/238 (5%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM- 103
V WT+ + CR G + +A F M N +++ +++SG + FL A+
Sbjct: 164 VVSWTTMVGGLCRLGLVDDAREVFDAMPAR----NLVSWNSMISG---YVKADRFLDALE 216
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAK----FGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
+ + LG++ N + +AL+ GR V + V + A++D Y
Sbjct: 217 VFDEMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLA-TAVVDMY 275
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
+ G ++ A +FD +P R +W ++ GF G ++ALE F +M+ +GV PD VT++
Sbjct: 276 CKCGCVDEAWGVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLL 335
Query: 220 SVLNACANVGTLGIG-LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
+VL ACA+ G + G +++ V + + + ++DL+ R G ++ A++V M
Sbjct: 336 NVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEM 393
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 257/451 (56%), Gaps = 37/451 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ +S R G EA M + PN +T ++L C + + G +
Sbjct: 184 VVSWTALLSAFTRGGMFMEALGVLAEMDV---TPNEVTLASVLVACGNLGTA--RAGKAV 238
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + + N ++VG ALLDMY K ++DL
Sbjct: 239 HGWYFRREKELN-LIVGNALLDMYVKCEKLDL---------------------------- 269
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A R+FD + RD +SWT +++G V+ EALE F MQISGV+PD V + +VL+A
Sbjct: 270 ---ARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSA 326
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA++G L G W+H Y+ ++ + +V V +++D+Y +CGC++ A +FQ M + + SW
Sbjct: 327 CASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSW 386
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I GFA++G EAL+ F+ M G P+ V+F L AC H+GL+++G + F++M K
Sbjct: 387 NALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTK 446
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y++SP +HYGC+VDL RAG +++A +V++ MPM+P +LL+AC+ G + ++
Sbjct: 447 SYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQ 506
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+++ ++ +L+ + YVLL+NMYA +W GK R M +G+QK+PG S IE+
Sbjct: 507 QILMHIHELESSGNGIYVLLSNMYAVSDRWADVGKARGFMNEKGMQKEPGSSVIEVNGKT 566
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCG 495
EF+ G ++H+ + + +ML +L + L G
Sbjct: 567 CEFLVGQQNHLYMDDVRAMLSILMKQIHLDG 597
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 133/233 (57%), Gaps = 12/233 (5%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
NA++ Y G A ++FDEM RD +SWTALL+ F + G F EAL EM ++
Sbjct: 157 NALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGGMFMEALGVLAEMDVT--- 213
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P+ VT+ SVL AC N+GT G +H + +++ + N+ V N L+D+Y +C ++ AR+V
Sbjct: 214 PNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVGNALLDMYVKCEKLDLARRV 273
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F + R +VSW +I G EALE FN+MQ G KPD V + L+AC+ G +
Sbjct: 274 FDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGAL 333
Query: 333 EDGLRYFDIMKKIYRVSPRIE---HYG-CIVDLYSRAGRLEDALNVVENMPMK 381
E G + +++ IE H G +VD+Y + G L+ A+++ + MP+K
Sbjct: 334 ESGRWVHEYIER-----KGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLK 381
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 127/310 (40%), Gaps = 49/310 (15%)
Query: 178 RDAISWTALLNGFVKRGYFEEALECFREMQIS-----GVEPDYVTIISVLNACANVGT-L 231
R A + AL++ G A F + ++ G PD T+ + L ACA +G L
Sbjct: 75 RCAHPFNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGL 134
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
G H K F V V N L+ Y CG AR+VF M +R +VSW +++ F
Sbjct: 135 REGCQAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAF 194
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR----YF-------- 339
G EAL M P+ V+ L AC + G G YF
Sbjct: 195 TRGGMFMEALGVLAEMD---VTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNL 251
Query: 340 ----------------DIMKKIYR--VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM- 380
D+ ++++ ++ I + ++ + R +AL V M +
Sbjct: 252 IVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQIS 311
Query: 381 --KPNEVVLGSLLAACRTKGDIILAERLMKYL----VDLDPGVDSNYVLLANMYAAVGKW 434
KP++VVL ++L+AC + G + + +Y+ ++ D V ++ V +MY G
Sbjct: 312 GVKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVV---DMYVKCGCL 368
Query: 435 DGAGKIRRTM 444
D A I + M
Sbjct: 369 DTAVSIFQEM 378
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 160/455 (35%), Positives = 250/455 (54%), Gaps = 35/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ IS + + R +A L F +M G +PN T +++ A C G +H
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC--GHQLH 184
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G K G D +NV VG+ALLD+Y ++ G +
Sbjct: 185 GFCVKCGFD-SNVHVGSALLDLYTRY-------------------------------GLM 212
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A +FD + R+ +SW AL+ G +R E+ALE F+ M G P + + S+ AC
Sbjct: 213 DDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGAC 272
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++ G L G W+H Y++K K NTL+D+Y++ G I AR++F R+ KR +VSWN
Sbjct: 273 SSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWN 332
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
S++ +A +GF EA+ +F M++ G +P+ +SF LTACSH+GL+++G Y+++MKK
Sbjct: 333 SLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD 392
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
+ P HY +VDL RAG L AL +E MP++P + +LL ACR + L
Sbjct: 393 -GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAY 451
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+++ +LDP +V+L N+YA+ G+W+ A ++R+ MK G++K+P S +EI + IH
Sbjct: 452 AAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIH 511
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F+A D H + E I E + +K GYVP+T
Sbjct: 512 MFVANDERHPQREEIARKWEEVLAKIKELGYVPDT 546
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 148/318 (46%), Gaps = 40/318 (12%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
+ TLL C F + L G ++H + + + R+++++G LL+MYAK G ++ A VF+
Sbjct: 63 YNTLLKKCTVF--KLLIQGRIVHAHILQ-SIFRHDIVMGNTLLNMYAKCGSLEEARKVFE 119
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
M + TW +I GY + + P +AL
Sbjct: 120 KMPQRDFVTWTTLISGYSQH-----------DRPC--------------------DALLF 148
Query: 203 FREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSR 262
F +M G P+ T+ SV+ A A G +H + +K F NV V + L+DLY+R
Sbjct: 149 FNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR 208
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGA 322
G ++ A+ VF + R VSWN++I G A +ALE F M ++GF+P S+
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 323 LTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYG--CIVDLYSRAGRLEDALNVVENMPM 380
ACS G +E G M K ++ + ++D+Y+++G + DA + + +
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIK---SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA- 324
Query: 381 KPNEVVLGSLLAACRTKG 398
K + V SLL A G
Sbjct: 325 KRDVVSWNSLLTAYAQHG 342
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 120/269 (44%), Gaps = 44/269 (16%)
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
++L C L G +H ++L+ F+ ++ + NTL+++Y++CG +E AR+VF++M +R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA--------CSHA-- 329
V+W ++I G++ + +AL +FN M + G+ P+ + + + A C H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 330 -------------------------GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
GL++D FD ++ VS + ++ ++R
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS-----WNALIAGHAR 239
Query: 365 AGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDL-DPGVDSN 420
E AL + + M +P+ SL AC + G + + + Y++ + V
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
L +MYA G A KI + R +
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 248/448 (55%), Gaps = 34/448 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ ++ + + G+ F RM PN TF ++S CA+F L G +H
Sbjct: 284 VSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFAR--LKWGEQLH 341
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V +G N + V +++ +Y+K G ++
Sbjct: 342 AHVLCVGF-VNALSVANSIMTLYSKCG-------------------------------EL 369
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
S ++F M RD I+W+ ++ + + GY EEA E M+ G +P+ + SVL+ C
Sbjct: 370 ASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVC 429
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
++ L G +H +VL + VC+ LI +Y++CG I A ++F K ++SW
Sbjct: 430 GSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWT 489
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G+A +G EA+E F ++QK G +PD V+F G LTACSHAG+++ G YF+ M K
Sbjct: 490 AMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKD 549
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y ++P EHYGC++DL RAGRL DA ++ +MP++ ++VV +LL ACR GD+ +R
Sbjct: 550 YHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQR 609
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
++ LDP ++ LAN++AA GKW A IR MK +G+ K+PG SS+++ +
Sbjct: 610 AAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVF 669
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKL 493
F++GDRSH + E IY++LE L+ +++
Sbjct: 670 AFVSGDRSHPQGEDIYNILEELASGMEI 697
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 185/431 (42%), Gaps = 71/431 (16%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ IS + S +EA F++M L ++L L+ G +H
Sbjct: 81 VSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLY-GTNLH 139
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G K GL N+V VG+ALLDM YM+ G+I
Sbjct: 140 GFSVKTGL-VNSVFVGSALLDM-------------------------------YMKIGEI 167
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ ++FDEMP R+A++WTA++ G V+ GY E L F M S VE D L A
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A+ G L G IH LK+ F +N V N+L +Y++CG +++ F++M +VSW
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWT 287
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIED 334
+I+ + G L+ F M+ P+ +F+ ++ C+ HA ++
Sbjct: 288 TIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCV 347
Query: 335 G-LRYFDIMKKIYRVSPR------------------IEHYGCIVDLYSRAGRLEDALNVV 375
G + + I + + I + I+ YS+ G E+A +
Sbjct: 348 GFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYL 407
Query: 376 ENMPM---KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYA 429
M KPNE L S+L+ C + + ++L ++ L G++ ++ L MYA
Sbjct: 408 SRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHV--LSVGLEQTSMVCSALIIMYA 465
Query: 430 AVGKWDGAGKI 440
G A KI
Sbjct: 466 KCGSIAEASKI 476
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 109/221 (49%), Gaps = 4/221 (1%)
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTI 218
++ ++ A +FD++P RD +SWT +++G+V EAL F +M++ S + D +
Sbjct: 60 VKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLL 119
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
L C G +H + +K ++V V + L+D+Y + G I + +VF M
Sbjct: 120 SLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPT 179
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR- 337
R V+W ++I G G+ L YF+ M + + D ++ AL A + +G + G
Sbjct: 180 RNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSI 239
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+ +KK + + + + + +Y++ G+L+ L+ M
Sbjct: 240 HTQTLKKGFDENSFVAN--SLTTMYNKCGKLDYGLHTFRKM 278
>gi|125539877|gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indica Group]
Length = 596
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 173/472 (36%), Positives = 260/472 (55%), Gaps = 17/472 (3%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMT------LHGTNPNHITFITLLSGCADFPSQCL 98
V + + IS R GR +EA F ++ + T ++ S CA
Sbjct: 129 VVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARH 188
Query: 99 FLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG 158
+HG V G++ V++ A++D Y+K GR++ A +FD M ++ S +W +MI G
Sbjct: 189 L--RELHGAVVVSGME-VTVIMANAMVDAYSKAGRVEDARGLFDQMTIRDSVSWTSMIAG 245
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y R ++ AV++FD MP +DAI+WTAL++G + G E ALE F M GV P +
Sbjct: 246 YCRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFAL 305
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKD---NVKVCNTLIDLYSRCGCIEFARQVFQR 275
+S L ACA VG + G +H ++L++ NV + N LID+YS+CG + A VF R
Sbjct: 306 VSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDR 365
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M +R ++SWNS++ GF+ NG ++L F M K+ +P V+F LTACSHAGL+ DG
Sbjct: 366 MLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDG 425
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS---LLA 392
R + M+ + V PR EHY +D R +LE+A ++ + K GS LL
Sbjct: 426 RRILESMQD-HGVEPRAEHYAAFIDALGRNHQLEEASEFIKGLSSKIGLGTTGSWGALLG 484
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK 452
AC G+I +AE + + L L+P YV+L+N+Y+A G+WD A ++R MKG+G++K
Sbjct: 485 ACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKD 544
Query: 453 PGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLC-GYVPETVAG 503
S IE+ H F+A D SH E+ IY ML+ L + + G V E + G
Sbjct: 545 QAYSWIEVQRAKHMFVADDTSHHEANEIYEMLDKLFHHMFIIGGNVEELIVG 596
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 37/194 (19%)
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQK------EGFKPDGVSFTGALTACS----- 327
R +VS+N++I A +G EAL F + + + D + A +AC+
Sbjct: 127 RNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDA 186
Query: 328 ------HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
H ++ G+ IM +VD YS+AGR+EDA + + M ++
Sbjct: 187 RHLRELHGAVVVSGMEVTVIMAN------------AMVDAYSKAGRVEDARGLFDQMTIR 234
Query: 382 PNEVVLGSLLAA-CRTKGDIILAERLMKYLVDLDPGVDS-NYVLLANMYAAVGKWDGAGK 439
+ V S++A CR +L + + + D+ P D+ + L + + G+ + A +
Sbjct: 235 -DSVSWTSMIAGYCRAS---MLDDAVQVF--DMMPAQDAIAWTALISGHEQNGEEEIALE 288
Query: 440 IRRTMKGRGIQKKP 453
+ M G G+ P
Sbjct: 289 LFERMTGEGVVPTP 302
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 162/454 (35%), Positives = 250/454 (55%), Gaps = 35/454 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHG-TNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
W ++IS + + EA F M H ++ N T + L+ A P CL LG IHG
Sbjct: 187 WNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIP--CLRLGKEIHG 244
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
+ + L+ + V+ W+A++D Y + G ++
Sbjct: 245 YLIRTELNLDEVV--------------------------------WSALLDLYGKCGSLD 272
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A +FD+M RD +SWT +++ + G EE FR++ SGV P+ T VLNACA
Sbjct: 273 EARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACA 332
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ +G +H Y++ + + L+ +YS+CG AR+VF MH+ LVSW S
Sbjct: 333 DHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTS 392
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
+IVG+A NG EAL +F + + G KPD V++ G L+AC+HAGL++ GL YF +K+ +
Sbjct: 393 LIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKH 452
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
+ +HY C++DL +R+GR ++A N+++NMP+KP++ + SLL CR G++ LA+R
Sbjct: 453 GLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRA 512
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHE 466
K L +++P + Y+ LAN+YA G W +R+ M GI KKPG S IEI +H
Sbjct: 513 AKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHV 572
Query: 467 FMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F+ GD SH ++ I+ L LS +K GYVP+T
Sbjct: 573 FLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDT 606
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 207/448 (46%), Gaps = 50/448 (11%)
Query: 37 NSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQ 96
N K V+ ++ ++ C+ R+ EA +E T H P+ + TL++ C +
Sbjct: 47 NPKDLVSEDNKFEEAVDVLCQQKRVKEA-VELLHRTDH--RPSARVYSTLIAACVR--HR 101
Query: 97 CLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMI 156
L LG +H K V + LLDMYAK G + A ++FD M + +WN MI
Sbjct: 102 ALELGRRVHAHT-KASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMI 160
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDY 215
GY + G +E A ++FDEMP RD SW A ++G+V EALE FR MQ +
Sbjct: 161 VGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNK 220
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
T+ S L A A + L +G IH Y+++ + + V + L+DLY +CG ++ AR +F +
Sbjct: 221 FTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQ 280
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-------- 327
M R +VSW ++I +G E F + + G +P+ +F G L AC+
Sbjct: 281 MKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLG 340
Query: 328 --------HAGLIEDGLRYFDIMKKIY------RVSPRIEHYGCIVDL---------YSR 364
HAG + G + +Y RV+ R+ + DL Y++
Sbjct: 341 KEVHGYMMHAGY-DPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQ 399
Query: 365 AGRLEDALNVVE---NMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPG----- 416
G+ ++AL+ E KP++V +L+AC G L ++ ++Y +
Sbjct: 400 NGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAG---LVDKGLEYFHSIKEKHGLMH 456
Query: 417 VDSNYVLLANMYAAVGKWDGAGKIRRTM 444
+Y + ++ A G++ A I M
Sbjct: 457 TADHYACVIDLLARSGRFKEAENIIDNM 484
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 16/175 (9%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WTS I + ++G+ EA F + GT P+ +T++ +LS C G +
Sbjct: 388 VSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACT-------HAGLVDK 440
Query: 106 GLVCKLGLDRNNVMVGTA-----LLDMYAKFGRMDLATVVFDAMRVK-SSFTWNAMIDGY 159
GL + + ++ TA ++D+ A+ GR A + D M VK F W +++ G
Sbjct: 441 GLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGC 500
Query: 160 MRRGDIE---SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV 211
G++E A + E+ + ++ L N + G + E ++M G+
Sbjct: 501 RIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGI 555
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 264/445 (59%), Gaps = 9/445 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V + S I + + GRI A + F + L N I++ +L+ G A L +
Sbjct: 193 SVSYNSMIDGYVKGGRIDLARVVFDCIPLE--ERNLISWNSLIRGYAQSEDGILVAWQLF 250
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ +++ +++D K GRM+ A +FD M + +W MIDGY + G
Sbjct: 251 ------AKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGR 304
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISVLN 223
++ A +FDEMP RD +++ A++ G+V+ GY EAL F MQ G D T++ L+
Sbjct: 305 VDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALS 364
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
A A +G + G+ IHR++ + F + ++ LID+YS+CG IE A VF+ + ++++
Sbjct: 365 AIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDH 424
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
WN+II G A++G A ++ M++ +PD ++F G L AC HAGL+++G+ F++M+
Sbjct: 425 WNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMR 484
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
++++V P+++HYGC+VD+ RAG +E+A N VE MP +PN+V+ SLL+AC+T +
Sbjct: 485 RVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLSACKTHESFNVG 544
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
+ + + L+ LD S+YVL +NMYA +GKW+ K+R MK + ++K PG S IE+
Sbjct: 545 QPVAENLMRLDSPSPSSYVLASNMYAGLGKWNDVRKVRAMMKQKNLKKIPGCSWIELEGH 604
Query: 464 IHEFMAGDRSHIESEHIYSMLELLS 488
++ F D+SH + IYS+L+ LS
Sbjct: 605 VYAFFVQDKSHPQFSGIYSILDSLS 629
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 175/340 (51%), Gaps = 20/340 (5%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I + EA + M +G + T +L C+ + G IHGL
Sbjct: 95 WNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTLSLVLKACSRV--GLVKEGMQIHGL 152
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ KL +++ + L+ Y K G + A+ VFD M + S ++N+MIDGY++ G I+
Sbjct: 153 LKKLEFG-SDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDL 211
Query: 168 AVRMFDEMPV--RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A +FD +P+ R+ ISW +L+ G+ + E+ + ++ E D ++ S+++ C
Sbjct: 212 ARVVFDCIPLEERNLISWNSLIRGYAQS---EDGILVAWQLFAKMPERDLISWNSMIDGC 268
Query: 226 ANVGTL--GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
G + GL+ + +D V N +ID Y++ G ++ AR +F M +R +V+
Sbjct: 269 VKCGRMEDAQGLFD-----RMPNRDIVSWAN-MIDGYAKNGRVDIARSLFDEMPERDVVA 322
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+N+++ G+ NG+ EAL F MQ +G F D + AL+A + G I+ G+ +
Sbjct: 323 YNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHRFI 382
Query: 343 KKI-YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
++I + + R+ ++D+YS+ G +E+A+ V EN+ K
Sbjct: 383 EEIGFSLDGRLG--VALIDMYSKCGSIENAMMVFENIKEK 420
>gi|297846320|ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336883|gb|EFH67300.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 586
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/420 (38%), Positives = 241/420 (57%), Gaps = 16/420 (3%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGT--NPNHITFITLLSGCADFPSQCLFLGAMIH 105
++SS+ H A +A F R+ ++ + PNH + +L S F ++H
Sbjct: 98 YSSSLPLH------ASSAFSFFRLMVNRSFPRPNHFIYPLVLKSTPYLSSA--FSTPLVH 149
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAK-FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+ K G V+V TALL YA + LA +FD M ++ +W AM+ GY R GD
Sbjct: 150 THLFKSGFHLY-VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGD 208
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLN 223
I +AV +F+EMP RD SW A+L + G F EA+ FR M + P+ VT++ VL+
Sbjct: 209 IFNAVALFEEMPERDVPSWNAILAACTQNGLFVEAVSLFRRMINDPCIRPNEVTLVCVLS 268
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
ACA GTL + IH + +++ +V V N+L+DLY +CG +E A VF+ K++L +
Sbjct: 269 ACAQTGTLQLAKGIHAFAYRRNLSSDVFVSNSLVDLYGKCGNLEEASSVFKMSSKKSLTA 328
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQK---EGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
WNS+I FA++G EA+ F M K KPD ++F G L AC+H GL+ G YFD
Sbjct: 329 WNSMINCFALHGRSEEAIAVFEDMMKLNSHDIKPDHITFIGLLNACTHGGLVSKGRGYFD 388
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+MKK + + PRIEHYGC++DL RAG+ ++AL + M M+ +E + GSLL AC+ G +
Sbjct: 389 LMKKRFGIEPRIEHYGCLIDLLGRAGQFDEALETMSTMKMEADEAIWGSLLNACKKYGHL 448
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
LAE +K LV L+P ++AN+Y +G W+ A + R+ +K + K PG S IEI
Sbjct: 449 DLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSQIEI 508
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 107/265 (40%), Gaps = 66/265 (24%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRM---------------TLHG--------------- 75
V WT+ +S + RSG I A F M T +G
Sbjct: 194 VSWTAMLSGYARSGDIFNAVALFEEMPERDVPSWNAILAACTQNGLFVEAVSLFRRMIND 253
Query: 76 --TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGR 133
PN +T + +LS CA + L L IH + L ++V V +L+D+Y K G
Sbjct: 254 PCIRPNEVTLVCVLSACAQ--TGTLQLAKGIHAFAYRRNLS-SDVFVSNSLVDLYGKCGN 310
Query: 134 MDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR 193
++ A+ VF KS WN+MI+ + G E A+ +F++M
Sbjct: 311 LEEASSVFKMSSKKSLTAWNSMINCFALHGRSEEAIAVFEDM------------------ 352
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF--KDNVK 251
++ ++PD++T I +LNAC + G + G ++K+ F + ++
Sbjct: 353 ----------MKLNSHDIKPDHITFIGLLNACTHGGLVSKGRGYFD-LMKKRFGIEPRIE 401
Query: 252 VCNTLIDLYSRCGCIEFARQVFQRM 276
LIDL R G + A + M
Sbjct: 402 HYGCLIDLLGRAGQFDEALETMSTM 426
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/395 (39%), Positives = 238/395 (60%), Gaps = 7/395 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCA----DFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTA 123
F +M + +P+ TF LL G + D P + IHG V KLG ++ V A
Sbjct: 270 FNQMRRNCVDPDGFTFTFLLKGRSRMRIDLP--LIVASDEIHGAVLKLGFC-FHLFVMNA 326
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
L+ +YA G A VF+ M +W+ ++ ++R G++E A ++F EMP RD +SW
Sbjct: 327 LIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFYEMPERDVVSW 386
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
T +++G+ + EALE FREM+ GV PD V ++SV++AC ++G L G +HRY+ +
Sbjct: 387 TVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISACTSLGDLETGFEVHRYIDE 446
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
F V +CN LID+Y++CGC++ A QVF M +++L++WNS+I A +G +A
Sbjct: 447 NGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRV 506
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F M G +PDGV+F LTA +H G ++DG F+ M++ Y V +EHYGC+VD+
Sbjct: 507 FTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLG 566
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
RAGRLE+A ++ +M M N+VV G+LLAACR GD+ + ER++K L++L P Y+L
Sbjct: 567 RAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEMGERVLKKLIELKPDEGGYYIL 626
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
L ++Y A G+ A ++RR M G +K G S +
Sbjct: 627 LRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 661
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 149/388 (38%), Gaps = 105/388 (27%)
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEP-DYVT--- 217
RG++E ++ M +SWT +++ + + E LE FRE++ V P D VT
Sbjct: 102 RGELELPRQVM--MKYLGDVSWTVMVSMYAQAKRSREPLELFREIRDVRVRPTDVVTMGV 159
Query: 218 -------------------------IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV 252
+ S+ AC + L + IH + + + V
Sbjct: 160 DYDKYKTLKSYISNKVMHMLPTSQSLASMAEACLTMQALKL---IHALAFRANLHHHALV 216
Query: 253 CNTLIDL--YSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
+ S GC+ +A ++F ++H+ +N++I G++ + ++++ FN M++
Sbjct: 217 LAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRN 276
Query: 311 GFKPDGVSFTGALTACS---------------HAGLIEDGLRY----FDIMKKIY--RVS 349
PDG +FT L S H +++ G + + + +Y R
Sbjct: 277 CVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGV 336
Query: 350 PRIEH-------------YGCIVDLYSRAGRLEDALNVVENMP----------------- 379
P H + +V + RAG LE A V MP
Sbjct: 337 PAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQA 396
Query: 380 -----------------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPG-VDSNY 421
++P+EV + S+++AC + GD+ + +Y+ + G + S
Sbjct: 397 KRSREALELFREMRDVGVRPDEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLC 456
Query: 422 VLLANMYAAVGKWDGAGKIRRTMKGRGI 449
L +MYA G D A ++ M+ + +
Sbjct: 457 NALIDMYAKCGCMDLAWQVFNNMERKSL 484
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 253/459 (55%), Gaps = 40/459 (8%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL--FL--GAM 103
W + +GR + + RM + G + + T+ LL C S+CL FL G
Sbjct: 138 WNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACV--ASECLVSFLQKGKE 195
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IH + + G +V V T L+DMYA+FG + A+ V
Sbjct: 196 IHAHILRHGYG-AHVHVMTTLMDMYARFGCVSYASAV----------------------- 231
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE--PDYVTIISV 221
FDEMPV++ +SW+A++ + K G EALE FREM ++ + P+ VT++SV
Sbjct: 232 --------FDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSV 283
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L ACA L G IH Y+L++ + V + LI +Y+RCG +E + +F RMHK+ +
Sbjct: 284 LQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDV 343
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
V WNS+I + ++G+ +A++ F M GF P +SF L ACSH GL+E+G + F+
Sbjct: 344 VLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFES 403
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M K + + P +EHY C+VDL RA RL++A ++E++ ++P V GSLL ACR +
Sbjct: 404 MVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVE 463
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
LAER K L L+P NYVLLA++YA WD ++++ + R +QK PG S IE+
Sbjct: 464 LAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVR 523
Query: 462 SGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I+ F + D + + E ++++L LS ++K GY P+T
Sbjct: 524 RKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQT 562
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 190/476 (39%), Gaps = 88/476 (18%)
Query: 10 LPQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFT 69
L P+ H P+ +T ++S+ + + + P I C+ G + +A +
Sbjct: 4 LRTPYSTHYP-PSSPRYSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLS 62
Query: 70 RMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYA 129
H +NP T L+ A S L +H L+ G D++ + T L++M++
Sbjct: 63 ----HESNPTQQTCELLILSAARRNSLSDALD--VHQLLVDGGFDQDPFL-ATKLINMFS 115
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
+ +D A VFD R ++ + W AL
Sbjct: 116 ELDTVDNARKVFDKTRKRTIYV-------------------------------WNALFRA 144
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN----VGTLGIGLWIHRYVLKQD 245
G + LE + M + GV D T +L AC V L G IH ++L+
Sbjct: 145 LALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHG 204
Query: 246 FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFN 305
+ +V V TL+D+Y+R GC+ +A VF M + +VSW+++I +A NG EALE F
Sbjct: 205 YGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFR 264
Query: 306 SM--QKEGFKPDGVSFTGALTACSHAGLIEDG--LRYFDIMKKIYRVSPRIEHYGCIVDL 361
M P+ V+ L AC+ +E G + + + + + + P I ++ +
Sbjct: 265 EMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVI---SALITM 321
Query: 362 YSRAGRLEDALNVVENMPMK----------------------------------PNEVVL 387
Y+R G+LE + + M K P+ +
Sbjct: 322 YARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISF 381
Query: 388 GSLLAACRTKGDIILAERLMKYLVD---LDPGVDSNYVLLANMYAAVGKWDGAGKI 440
S+L AC G + ++L + +V + P V+ +Y + ++ + D A KI
Sbjct: 382 ISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVE-HYACMVDLLGRANRLDEAAKI 436
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 268/486 (55%), Gaps = 45/486 (9%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLL-SGCADFPSQCLFLGAMI 104
V W + + + +GR +A F RM + +I L+ SG D + G M
Sbjct: 135 VSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNILLAMLVRSGSVDKARE--LFGRM- 191
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR-- 162
+VM T ++D A+ G +D A ++FD+M ++ +WNAMI GY R
Sbjct: 192 ---------PERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMISGYTRNHR 242
Query: 163 -----------------------------GDIESAVRMFDEMPVRDAISWTALLNGFVKR 193
D++ A ++FDEMP R+ ++WT ++NG++K
Sbjct: 243 LDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWTTMMNGYLKG 302
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
E +L FR M +SG+ P+ VT + L+AC+++ TL G +H+ + K F+ + V
Sbjct: 303 KQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVG 362
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
+ L+++Y++CG + AR++F ++ L+SWN II +A +G EA+ + MQ G++
Sbjct: 363 SALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYR 422
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
P+ V++ L+ACSH+GL+++GL+ F+ M ++ R EHY C++DL SRAGRL+DA
Sbjct: 423 PNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKR 482
Query: 374 VVENMPMKP-NEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
++ + +KP + V +LL C G+ + + L+ +P Y LL+N+YA+ G
Sbjct: 483 LIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLIQAEPDNAGTYTLLSNIYASAG 542
Query: 433 KWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
KW A +IR M RG++K+PG S IE+ + +H F+A D+SH ES+ IY +L+ + + ++
Sbjct: 543 KWKEAAEIRSEMNNRGLKKQPGCSWIEVANKVHVFVARDKSHSESDLIYGLLQNIHYMMR 602
Query: 493 LCGYVP 498
+ G VP
Sbjct: 603 IVGTVP 608
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 196/436 (44%), Gaps = 55/436 (12%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ +S + R G + +A F R N +T+ LLSG A G +
Sbjct: 72 VSWTALVSAYARRGMLRDARSLFDR---SDARRNVVTWTALLSGYAR-------AGLVDE 121
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V + + NV+ +L+ YA GR A +FD M V+ + +WN ++ +R G +
Sbjct: 122 AEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNILLAMLVRSGSV 181
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A +F MP RD ++WT +++G + G +EA F M E + V+ ++++
Sbjct: 182 DKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMP----ERNVVSWNAMISGY 237
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
L L + + +D + CN +I + + ++ AR++F M +R +V+W
Sbjct: 238 TRNHRLDEALDLFTKMPHRD----IASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWT 293
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM--- 342
+++ G+ +L F M G +P+ V+F GAL ACS + +G + ++
Sbjct: 294 TMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKT 353
Query: 343 -------------------------KKIYRVSPRIE--HYGCIVDLYSRAGRLEDALNVV 375
+K++ +S + + I+ Y+ G +A+++
Sbjct: 354 AFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLY 413
Query: 376 ENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGV---DSNYVLLANMYA 429
E M +PN+V LL+AC G + ++ + +V+ D + D +Y L ++ +
Sbjct: 414 EKMQGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVN-DRSIAVRDEHYTCLIDLCS 472
Query: 430 AVGKWDGAGKIRRTMK 445
G+ D A ++ +K
Sbjct: 473 RAGRLDDAKRLIHYLK 488
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 149/328 (45%), Gaps = 24/328 (7%)
Query: 112 GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSS-FTWNAMIDGYMRRGDIESAVR 170
G +V+ TAL+ YA+ G + A +FD + + TW A++ GY R G ++ A
Sbjct: 65 GTPERDVVSWTALVSAYARRGMLRDARSLFDRSDARRNVVTWTALLSGYARAGLVDEAEV 124
Query: 171 MFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGT 230
+F MP R+ +SW +L + G +A F M + + ++++L +V
Sbjct: 125 LFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDA-GSWNILLAMLVRSGSVDK 183
Query: 231 LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
R + + + +V T++D +R G ++ AR +F M +R +VSWN++I G
Sbjct: 184 A-------RELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMISG 236
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
+ N + EAL+ F M + TG + ++ + FD M + V+
Sbjct: 237 YTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKD----LKRARKLFDEMPERNVVT- 291
Query: 351 RIEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLAACRTKGDIILAERLM 407
+ +++ Y + + E +L + M M +PN+V L AC + +++
Sbjct: 292 ----WTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVH 347
Query: 408 KYLVDLDPGVDSNYV--LLANMYAAVGK 433
+ + VD+ +V L N+YA G+
Sbjct: 348 QMICKTAFQVDT-FVGSALMNVYAKCGE 374
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G + A ++FD P RD +SWTAL++ + +RG +A F S + VT ++L
Sbjct: 54 GRVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFDR---SDARRNVVTWTALL 110
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
+ A G + + ++ + NV NT+++ Y+ G A +F RM R
Sbjct: 111 SGYARAGLVDEA----EVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDAG 166
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
SWN ++ +G V +A E F M + D +++T + + +G +++ FD M
Sbjct: 167 SWNILLAMLVRSGSVDKARELFGRMPER----DVMAWTTMVDGVARSGNVDEARLLFDSM 222
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ VS + ++ Y+R RL++AL++ MP +
Sbjct: 223 PERNVVS-----WNAMISGYTRNHRLDEALDLFTKMPHR 256
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 152/414 (36%), Positives = 237/414 (57%), Gaps = 6/414 (1%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
A L M HG P+ TF LL C+ L G +H K GL +V V
Sbjct: 70 HALLLHRHMFRHGPPPDTYTFPFLLKACSALAH--LLKGQELHCQALKFGLG-GHVFVEN 126
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
+L+ +Y RMD A VFD M + +W ++ Y +E+A ++FDEMP R +S
Sbjct: 127 SLIHLYGSNSRMDSARRVFDGMGYRDIASWTTLLACYANSCSVEAARKVFDEMPERSVVS 186
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
++A+L +V+ F EALE FRE+ +EP ++SVL ACAN+G L +G W++ +V
Sbjct: 187 YSAMLAAYVRGNRFREALELFRELFSVKIEPSDSCVMSVLCACANLGALDVGRWVYSFVC 246
Query: 243 --KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 300
K D+ D+ ++ LID++ +CG IE A VF+ ++ + W +++ G A++G +
Sbjct: 247 HSKGDYVDS-RIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAMHGLGEQL 305
Query: 301 LEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVD 360
+E F M G KPD V+F L+ CSH+GL+ +GL YFD M+ + V P +EH+GC+VD
Sbjct: 306 IEAFEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVEHFGCVVD 365
Query: 361 LYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSN 420
L RAG ++ A+ ++ MP +PN + G+LL ACR ++ + E ++L+ +P +
Sbjct: 366 LLGRAGLIDQAMQLISEMPFEPNAAIWGALLNACRVYKNVEVGELAAQWLIKDEPWNGAL 425
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSH 474
Y+ L ++Y G+WD K++ MK G +K PG S IE+G +EF+ GD+SH
Sbjct: 426 YMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGDKSH 479
>gi|115440947|ref|NP_001044753.1| Os01g0839400 [Oryza sativa Japonica Group]
gi|15623829|dbj|BAB67888.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|21104616|dbj|BAB93208.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534284|dbj|BAF06667.1| Os01g0839400 [Oryza sativa Japonica Group]
gi|125572581|gb|EAZ14096.1| hypothetical protein OsJ_04019 [Oryza sativa Japonica Group]
Length = 456
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 168/441 (38%), Positives = 249/441 (56%), Gaps = 3/441 (0%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V T++I RSGR +A F+ + G PN TF T+L + L +GA +
Sbjct: 6 VVSATAAIGALTRSGRHRDAVALFSGILGDGIVPNEFTFGTILQSASALRD--LRVGAQL 63
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V KLGL +NV VG+AL+D YAK G + A R + ++ A+I G+++ G
Sbjct: 64 HACVAKLGLC-SNVFVGSALVDHYAKMGSVREAQGALQDTREPNVVSYTALIAGFLKNGM 122
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
A R+F MP R+ ISW A++ G K G EEA+ F EM GV P+ T +L +
Sbjct: 123 SGDAARLFRCMPERNVISWNAMIGGSSKAGLNEEAVNLFLEMCREGVRPNESTFPCLLTS 182
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
AN G LG+G IH +K K +V N+L+ Y+RCG ++ + F+++ + +VSW
Sbjct: 183 VANAGALGVGRSIHASAIKFLGKLDVFAGNSLVSFYARCGSLDDSVLAFKKIKNKNVVSW 242
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I G+A NG EAL+ F M+ G K D V+ G L C+HAGL+++G F +
Sbjct: 243 NALICGYAQNGRGEEALDAFRRMKATGLKLDRVTLLGLLFGCNHAGLVDEGYSLFRTAEM 302
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
R EHY C+VDL+SRA R +DA +EN+P +P SL+ C+ + LA+
Sbjct: 303 EQPGVLRPEHYACVVDLFSRAKRFDDAKRFLENLPFEPGIGFWKSLIGGCQIHWNRELAK 362
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ K++ LDP S+Y+LL+N+Y+A G W IRR +K +G+++ G S IE+ + +
Sbjct: 363 SVAKHIHALDPKDTSSYILLSNVYSAAGSWQDVSMIRREIKEKGLKRITGCSWIEVQNQV 422
Query: 465 HEFMAGDRSHIESEHIYSMLE 485
H F GDR H +S+ IY MLE
Sbjct: 423 HVFFNGDRRHPKSDDIYMMLE 443
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 19/283 (6%)
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
MP RD +S TA + + G +A+ F + G+ P+ T ++L + + + L +G
Sbjct: 1 MPHRDVVSATAAIGALTRSGRHRDAVALFSGILGDGIVPNEFTFGTILQSASALRDLRVG 60
Query: 235 LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
+H V K NV V + L+D Y++ G + A+ Q + +VS+ ++I GF N
Sbjct: 61 AQLHACVAKLGLCSNVFVGSALVDHYAKMGSVREAQGALQDTREPNVVSYTALIAGFLKN 120
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
G G+A F M + +S+ + S AGL E+ + F M + V P
Sbjct: 121 GMSGDAARLFRCMPERNV----ISWNAMIGGSSKAGLNEEAVNLFLEMCR-EGVRPNEST 175
Query: 355 YGCIVDLYSRAGRL-------EDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ C++ + AG L A+ + + + ++ S A C + D +LA + +
Sbjct: 176 FPCLLTSVANAGALGVGRSIHASAIKFLGKLDVFAGNSLV-SFYARCGSLDDSVLAFKKI 234
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
K + V S L+ YA G+ + A R MK G++
Sbjct: 235 K-----NKNVVSWNALICG-YAQNGRGEEALDAFRRMKATGLK 271
>gi|356524110|ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Glycine max]
Length = 611
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 174/487 (35%), Positives = 274/487 (56%), Gaps = 49/487 (10%)
Query: 27 TTPQISIQTNNSKSTVNP-TVQWTSSISRHCRSGRI--AEAALEF--TRMTLHGTN--PN 79
T P ++ T NP + W + I + RS A+E T MT+ P+
Sbjct: 71 TQPNLTYATRVFHHFPNPNSFMWNTLIRVYARSTNTNHKHKAMELYKTMMTMEEKTAVPD 130
Query: 80 HITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATV 139
+ TF +L CA S C G +H V K G + ++ + +L+ YA G +DLA
Sbjct: 131 NHTFPIVLKACAYTFSLCE--GKQVHAHVLKHGFE-SDTYICNSLVHFYATCGCLDLAE- 186
Query: 140 VFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEA 199
+MF +M R+ +SW +++ + K G F+ A
Sbjct: 187 ------------------------------KMFYKMSERNEVSWNIMIDSYAKGGIFDTA 216
Query: 200 LECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ---DFKDNVKVCNTL 256
L F EMQ +PD T+ SV++ACA +G L +GLW+H Y+LK+ + D+V V L
Sbjct: 217 LRMFGEMQRVH-DPDGYTMQSVISACAGLGALSLGLWVHAYILKKCDKNMVDDVLVNTCL 275
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPD 315
+D+Y + G +E A+QVF+ M R L +WNS+I+G A++G AL Y+ M K E P+
Sbjct: 276 VDMYCKSGELEIAKQVFESMAFRDLNAWNSMILGLAMHGEAKAALNYYVRMVKVEKIVPN 335
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
++F G L+AC+H G++++G+ +FD+M K Y V PR+EHYGC+VDL++RAGR+ +ALN+V
Sbjct: 336 SITFVGVLSACNHRGMVDEGIVHFDMMTKEYNVEPRLEHYGCLVDLFARAGRINEALNLV 395
Query: 376 ENMPMKPNEVVLGSLL-AACRTKGDIILAERLMKYLVDLDPGVDSN--YVLLANMYAAVG 432
M +KP+ V+ SLL A C+ + L+E + K + + + V S+ YVLL+ +YA+
Sbjct: 396 SEMSIKPDAVIWRSLLDACCKQYASVELSEEMAKQVFESEGSVCSSGVYVLLSKVYASAC 455
Query: 433 KWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
+W+ G +R+ M +G+ K+PG S IEI +HEF AGD +H +SE+IY ++ + L+
Sbjct: 456 RWNDVGLLRKLMSEKGVTKEPGCSIIEIDGVVHEFFAGDTTHPKSENIYKVVTEIEEKLE 515
Query: 493 LCGYVPE 499
GY+P+
Sbjct: 516 SIGYLPD 522
>gi|357462223|ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344321|ref|XP_003636238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490441|gb|AES71644.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502173|gb|AES83376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 486
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/434 (36%), Positives = 259/434 (59%), Gaps = 10/434 (2%)
Query: 31 ISIQTNNSKSTVNPTVQWTSSISR-HCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSG 89
+S N PT + +++ R H S + ++L F RM + P+ +F LL
Sbjct: 57 LSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLLKS 116
Query: 90 CADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVF-DAMRVK- 147
S + L IHG V K G R+ + V AL+ +YA G A VF DA+RV
Sbjct: 117 ----RSFTMPLVHDIHGAVFKFGFCRH-LHVQNALIHLYAVGGVTISARKVFEDAVRVGL 171
Query: 148 --SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
+W+ ++ + + G+++ A ++FD MP RD +SWT +L+ + K E L+ F+E
Sbjct: 172 DVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQE 231
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGC 265
M+++GV PD VT++SV++ACA +G +G +H++V + F V +CN+LID+Y +CGC
Sbjct: 232 MRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGC 291
Query: 266 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
+E A QVF R +++L++WN++++ A +G+ +A F M G PDGV+ L A
Sbjct: 292 LEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVA 351
Query: 326 CSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEV 385
+H G +++G+R F+ M++ Y V PRIEHYG +VD+ R+GRL++A N++ +MP+ N+V
Sbjct: 352 YAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDV 411
Query: 386 VLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMK 445
+ G+LL ACR GD+ + ER++K L++L P Y+LL ++Y A G+ A ++R+ M
Sbjct: 412 IWGALLGACRIHGDVGMGERVIKKLLELKPDEGGYYILLRDIYVAAGRTAEANEMRQAML 471
Query: 446 GRGIQKKPGLSSIE 459
G +K PG S +E
Sbjct: 472 ASGARKNPGCSWVE 485
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 140/322 (43%), Gaps = 25/322 (7%)
Query: 103 MIHGLVCKLGLDRNNVMVGTAL-LDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+IH + L ++ V++G + FG + A +FD M ++F +N +I +
Sbjct: 25 LIHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQPTTFFYNTLIRAHSH 84
Query: 162 RGDIESAVRMFDEMP----VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVT 217
+ F+ M D S+T LL R + + ++ + + +
Sbjct: 85 STTPSFSSLFFNRMRRNSIAPDEFSFTFLLK---SRSF---TMPLVHDIHGAVFKFGFCR 138
Query: 218 IISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKV--------CNTLIDLYSRCGCIEFA 269
+ V NA ++ +G G+ I ++ F+D V+V + L+ +++ G ++ A
Sbjct: 139 HLHVQNALIHLYAVG-GVTISA---RKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVA 194
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
R+VF M +R +VSW ++ ++ E L+ F M+ G PD V+ ++AC+
Sbjct: 195 RKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAEL 254
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
G E G +++ + ++D+Y + G LE+A V + K + + +
Sbjct: 255 GDAEMGRMVHKFVEE-NGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRK-SLITWNA 312
Query: 390 LLAACRTKGDIILAERLMKYLV 411
++ C G A RL + ++
Sbjct: 313 MMMVCANHGYAEDAFRLFEGMI 334
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 235/443 (53%), Gaps = 39/443 (8%)
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMID 157
L LG IH +LGLD NV V + + MYA+ GR D A +F+ M+ + +WNAMI
Sbjct: 28 LVLGRQIHSSTARLGLD-GNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMIS 86
Query: 158 GYMRRG--------------------------------------DIESAVRMFDEMPVRD 179
G+ G DI +FDEM +
Sbjct: 87 GFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKG 146
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHR 239
ISW A+L + EA+E F MQ G+EPD VT+ +VL +C V L +G IH
Sbjct: 147 LISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHE 206
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
+ ++ ++ + N L+D+Y+ CGC++ AR VF M R +VSW SII + +G E
Sbjct: 207 VIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGRE 266
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
A++ F M +G +PD ++F L ACSHAGL++ G YF M + ++P++EHY C+V
Sbjct: 267 AIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMV 326
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
DL RAG + +A + + MP+KPNE V G+LL ACR ++ + L+ L P
Sbjct: 327 DLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTG 386
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEH 479
YVLL+N+YA G+W +R M+ +GI+K PG+S+ E+G +H F GD SH +S+
Sbjct: 387 YYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKM 446
Query: 480 IYSMLELLSFDLKLCGYVPETVA 502
IY L L ++ GY PE A
Sbjct: 447 IYKKLSELLRRIREMGYNPEVEA 469
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 207 QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI 266
Q G+ P + + +CA L +G IH + NV V ++ I +Y+RCG
Sbjct: 4 QGPGLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRP 63
Query: 267 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTA 325
+ A Q+F+ M R +VSWN++I GFA G G A++ F + + KPD + L +
Sbjct: 64 DDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPS 123
Query: 326 CSHAGLIEDGLR--YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---M 380
A + + L FD M+ +S + ++ +Y+ +A+ + M +
Sbjct: 124 MGKARVEDIALLKGVFDEMRFKGLIS-----WNAMLAVYTNNEMHVEAVELFMRMQKDGI 178
Query: 381 KPNEVVLGSLLAACRTKGDIILAERL 406
+P+ V L ++L +C + L +R+
Sbjct: 179 EPDAVTLATVLPSCGEVSALSLGKRI 204
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 253/465 (54%), Gaps = 37/465 (7%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
+ RM +P+ T+ +L+ + F S+ G + + K G + V + T L+D
Sbjct: 114 YVRMLRDSVSPSSYTYSSLVKA-SSFASR---FGESLQAHIWKFGFGFH-VKIQTTLIDF 168
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTW-------------------------------NAMI 156
Y+ GR+ A VFD M + W N +I
Sbjct: 169 YSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 228
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
+GYM G++E A +F++MPV+D ISWT ++ G+ + + EA+ F +M G+ PD V
Sbjct: 229 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 288
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T+ +V++ACA++G L IG +H Y L+ F +V + + L+D+YS+CG +E A VF +
Sbjct: 289 TMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNL 348
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
K+ L WNSII G A +GF EAL+ F M+ E KP+ V+F TAC+HAGL+++G
Sbjct: 349 PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR 408
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
R + M Y + +EHYG +V L+S+AG + +AL ++ NM +PN V+ G+LL CR
Sbjct: 409 RIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRI 468
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKK-PGL 455
++++AE L+ L+P Y LL +MYA +W +IR M+ GI+K PG
Sbjct: 469 HKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGT 528
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
SSI I H F A D+SH S+ + +L+ + + L GYV ET
Sbjct: 529 SSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQET 573
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 157/396 (39%), Gaps = 97/396 (24%)
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ AV +M + + AL GFV + +LE + M V P T S++ A
Sbjct: 76 LDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA 135
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
+ G L H + K F +VK+ TLID YS G I AR+VF M +R ++W
Sbjct: 136 SSFASRFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAW 193
Query: 285 NSIIVGF--------------------------AVNGFVG-------------------- 298
+++ + +NG++G
Sbjct: 194 TTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDII 253
Query: 299 ----------------EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
EA+ F M +EG PD V+ + ++AC+H G++E G
Sbjct: 254 SWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIG------- 306
Query: 343 KKIYRVSPR----IEHY--GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
K+++ + + ++ Y +VD+YS+ G LE AL V N+P K N S++
Sbjct: 307 KEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP-KKNLFCWNSIIEGLAA 365
Query: 397 KGDIILAERLMKYLVDLD-PGVDSNYVLLANMYAA---VGKWDGAGKIRRTMKGRGIQKK 452
G A+ +K ++ V N V +++ A G D +I R+M I
Sbjct: 366 HG---FAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM----IDDY 418
Query: 453 PGLSSIE-IGSGIHEFMAGDRSHIESEHIYSMLELL 487
+S++E G +H F IY LEL+
Sbjct: 419 SIVSNVEHYGGMVHLFSKAGL-------IYEALELI 447
>gi|125574942|gb|EAZ16226.1| hypothetical protein OsJ_31678 [Oryza sativa Japonica Group]
Length = 387
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 149/374 (39%), Positives = 234/374 (62%), Gaps = 8/374 (2%)
Query: 127 MYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTAL 186
MYA LA +FD + + +WNA++DGY + D+ +A R+F MP RD +SW+A+
Sbjct: 1 MYAACALPGLARRLFDEIPRPNHVSWNALLDGYAKCRDLPAARRVFARMPQRDVVSWSAM 60
Query: 187 LNGFVKRGYFEEALECFREMQIS-----GVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
++G VK G EAL F M+ + GV + VT++SVL ACA++G L G +HRY+
Sbjct: 61 IDGCVKCGEHREALAVFEMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYL 120
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM--HKRTLVSWNSIIVGFAVNGFVGE 299
+ F N+++ +L+D+Y++CG I A +VFQ + ++ WN++I G AV+G E
Sbjct: 121 EEHGFPLNIRLATSLVDMYAKCGAIVEALEVFQAVPVENTDVLIWNAVIGGLAVHGMSRE 180
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
+L+ F M+ G PD +++ L+AC H GL+++ +F ++ + P +EHY C+V
Sbjct: 181 SLQMFQKMEHAGVVPDEITYLSLLSACVHGGLVDEAWSFFRSLEA-QGLRPHVEHYACLV 239
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
D+ RAGRLE+A VV++MPMKP+ VLG+LL AC G + L E + + LV L P D
Sbjct: 240 DVLGRAGRLEEAYGVVKSMPMKPSVSVLGALLNACHLHGWVELGEAVGRQLVHLQPDHDG 299
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEH 479
Y+ L+N+YA +W A K R+ M+ RG++K PG S I++G GI F+A D++H S
Sbjct: 300 RYIGLSNIYAVARRWQEAKKARKVMEERGVKKVPGFSEIDVGRGICRFIAQDKTHPGSAE 359
Query: 480 IYSMLELLSFDLKL 493
IY++L+L++ D+K+
Sbjct: 360 IYALLKLIAMDMKM 373
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 159/403 (39%), Positives = 245/403 (60%), Gaps = 18/403 (4%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +HG V K L + VG +++ MY FG ++LA VFD M + +WN+MI GY+
Sbjct: 128 GRQVHGQVLKTHL-WFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYL 186
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+ G+IE A +FDEMP RD +S A+++G+ K EM G+ PD I+S
Sbjct: 187 KAGEIELASELFDEMPERDLVSCNAMIDGYGK------------EMLSLGLRPDGPAIVS 234
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFK-DNVKVCNTLIDLYSRCGCIEFARQVFQRM-HK 278
VL+A A++G + G W+H YV + + + + LID+YS+CG IE A VF+ + H+
Sbjct: 235 VLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHR 294
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R + WNS+I G A++G EAL+ F M++ +P+ ++F G L+ CSH GL+E+G Y
Sbjct: 295 RNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFY 354
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F+ M + Y++ PRI+HYGC++DL+ RAGRLEDAL V++NMP + + + ++L+A G
Sbjct: 355 FESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHG 414
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
I + + ++L P S+YVLL+N+YA G+WD KIR M+ RG++K G SS+
Sbjct: 415 HIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSM 474
Query: 459 EIGSGIHEFMAGDR--SHIESEHIYSMLELLSFDLKLCGYVPE 499
+ +HEF+ G S + + + E++S LKL GY P+
Sbjct: 475 LVNGKVHEFLLGKELDSSYSGQVLAKIAEVVS-RLKLQGYEPD 516
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 155/367 (42%), Gaps = 66/367 (17%)
Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVG--TALLDMY 128
MT TNP +++L C S C IH + K L + V A +
Sbjct: 1 MTAISTNP----VVSVLDKC---KSLCEL--RQIHAQMIKTNLLNHQFTVSRLIAFCSLS 51
Query: 129 AKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLN 188
G +D A+ VF ++ +SF + A+I G+ + PV I + +L+
Sbjct: 52 GVSGGLDYASSVFSRIQHPNSFIFFALIKGFSDTSN-----------PVESLILYARMLS 100
Query: 189 GFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKD 248
C SGVE +I SVL AC + G +H VLK
Sbjct: 101 -------------CLN--YSSGVE---FSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWF 142
Query: 249 NVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQ 308
+ V N+++ +Y G IE AR+VF RM R +VSWNS+I G+ G + A E F+ M
Sbjct: 143 DPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEMP 202
Query: 309 KE-------------------GFKPDGVSFTGALTACSHAGLIEDG--LRYFDIMKKIYR 347
+ G +PDG + L+A + G +E+G L + M KI
Sbjct: 203 ERDLVSCNAMIDGYGKEMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIEL 262
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
S I ++D+YS+ G +E+A +V ++ + N S+++ G LA +
Sbjct: 263 SSGFIG--SALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHG---LAREAL 317
Query: 408 KYLVDLD 414
V+++
Sbjct: 318 DIFVEME 324
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 165/453 (36%), Positives = 245/453 (54%), Gaps = 34/453 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WTS I+ + + EA F M L G P++I + +S CA + + G I
Sbjct: 411 VVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKA--MRQGQQI 468
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V Y D++ WNA+++ Y R G
Sbjct: 469 HSRV-------------------YVSGYSADVSI-------------WNALVNLYARCGR 496
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+ A +F+ + +D I+W +++GF + G +EEALE F +M +GV+ + T +S ++A
Sbjct: 497 SKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISA 556
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
AN+ + G IH V+K +V N LI LY +CG IE A+ F M +R VSW
Sbjct: 557 SANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSW 616
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+II + +G+ EAL+ F+ M++EG KP+ V+F G L ACSH GL+E+GL YF M
Sbjct: 617 NTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSS 676
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ + PR +HY C+VD+ RAG+L+ A VE MP+ N +V +LL+ACR +I + E
Sbjct: 677 EHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGE 736
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
KYL++L+P ++YVLL+N YA GKW +R+ MK RG++K+PG S IE+ + +
Sbjct: 737 LAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVV 796
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYV 497
H F GDR H + IY L L L GY+
Sbjct: 797 HAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYI 829
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 182/390 (46%), Gaps = 42/390 (10%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F +M G PN T+ LL C + + + LG IH L K G + +++ V L+DM
Sbjct: 333 FCQMVAAGVRPNEFTYPCLLRTCT-YAGE-INLGEQIHLLSIKTGFE-SDMYVSGVLIDM 389
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y+K+G +D A R+ + + +D +SWT+++
Sbjct: 390 YSKYGWLD-------------------------------KARRILEVLEAKDVVSWTSMI 418
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
G+V+ + +EALE F++MQ+ G+ PD + + S ++ACA + + G IH V +
Sbjct: 419 AGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYS 478
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
+V + N L++LY+RCG + A +F+ + + ++WN ++ GFA +G EALE F M
Sbjct: 479 ADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKM 538
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+ G K + +F +++A ++ I+ G + + K + E ++ LY + G
Sbjct: 539 YQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGS 597
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
+EDA M + N V +++ +C G + A L + G+ N V +
Sbjct: 598 IEDAKMQFFEMSER-NHVSWNTIITSCSQHGWGLEALDLFDQMK--QEGLKPNDVTFIGV 654
Query: 428 YAAVGK----WDGAGKIRRTMKGRGIQKKP 453
AA +G G + GI +P
Sbjct: 655 LAACSHVGLVEEGLGYFKSMSSEHGIHPRP 684
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 180/414 (43%), Gaps = 80/414 (19%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF- 99
+ V W + +S + R+G EA + +M G P ++LS C LF
Sbjct: 104 SARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACT---KAALFE 160
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
G ++H V K G + +VG AL+ +Y +FG + LA VF M T+N +I +
Sbjct: 161 QGRLVHAQVYKQG-SCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRH 219
Query: 160 MRRGDIESAVRMFDEMPVR---------------------------------------DA 180
+ G+ ESA+ +F+EM + D
Sbjct: 220 AQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDY 279
Query: 181 ISWTALLNGFVKRGYFEEALECFR-------------------------------EMQIS 209
I +LL+ +VK G EALE F+ +M +
Sbjct: 280 IIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAA 339
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
GV P+ T +L C G + +G IH +K F+ ++ V LID+YS+ G ++ A
Sbjct: 340 GVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKA 399
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
R++ + + + +VSW S+I G+ + F EALE F MQ G PD + A++AC+
Sbjct: 400 RRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGI 459
Query: 330 GLIEDGLRYFDIMKKIY--RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ G + I ++Y S + + +V+LY+R GR ++A ++ E + K
Sbjct: 460 KAMRQGQQ---IHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHK 510
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
N +ID Y ++G ++ A R+F+++ RD +SW A+L+G+ + G EEA+ + +M SGV
Sbjct: 81 NLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVV 140
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P + SVL+AC G +H V KQ V N LI LY R G + A +V
Sbjct: 141 PTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERV 200
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F M V++N++I A G ALE F M+ G+ PD V+ L AC+ G +
Sbjct: 201 FSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDL 260
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVEN--------------- 377
G + + K +SP G ++DLY + G + +AL + ++
Sbjct: 261 NKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVA 319
Query: 378 -------------------MPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVD 418
++PNE LL C G+I L E++ +L+ + G +
Sbjct: 320 YGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQI--HLLSIKTGFE 377
Query: 419 SN-YV--LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
S+ YV +L +MY+ G D A +I ++ + + +S+ G HEF
Sbjct: 378 SDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDV---VSWTSMIAGYVQHEF 426
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 170/493 (34%), Positives = 265/493 (53%), Gaps = 48/493 (9%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
W S IS + +G EA F ++ L P+ TF +L C L G IH
Sbjct: 85 WNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG-----TLVDGRKIHC 139
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
KLG + NV V +L+ MY++FG +A +FD M + +WNAMI G ++ G+
Sbjct: 140 WAFKLGF-QWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAA 198
Query: 167 SAVRMFDEM---------------------------------------PVRDAISWTALL 187
A+ + DEM PV+D ISW L+
Sbjct: 199 QALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLI 258
Query: 188 NGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
G+ + G EA+E ++ M + + P+ T +S+L A A+VG L G+ IH V+K +
Sbjct: 259 TGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNL 318
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
+V V LID+Y +CG + A +F ++ + + V+WN+II ++G + L+ F
Sbjct: 319 HLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGE 378
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
M EG KPD V+F L+ACSH+G +E+G F +M++ Y + P ++HYGC+VDL RAG
Sbjct: 379 MLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAG 437
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN 426
LE A + +++MP++P+ + G+LL ACR G+I L + L ++D YVLL+N
Sbjct: 438 YLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSN 497
Query: 427 MYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLEL 486
+YA VGKW+G K+R + RG++K PG S+IE+ + F G++SH + + IY L +
Sbjct: 498 IYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRV 557
Query: 487 LSFDLKLCGYVPE 499
L+ +K GY+P+
Sbjct: 558 LTAKMKSLGYIPD 570
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 173/400 (43%), Gaps = 94/400 (23%)
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
L ++ A +V+S F +++ Y GD+ + FD++P +D +W ++++ +V G+
Sbjct: 38 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 97
Query: 196 FEEALECFREMQ-ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCN 254
F EA+ CF ++ +S + PD+ T VL AC GTL G IH + K F+ NV V
Sbjct: 98 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAA 154
Query: 255 TLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK- 313
+LI +YSR G AR +F M R + SWN++I G NG +AL+ + M+ EG K
Sbjct: 155 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 214
Query: 314 ----------------------------------PDGVSFTGALTACSHAGLIEDGLRYF 339
D +S+ +T + GL + + +
Sbjct: 215 NFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVY 274
Query: 340 DIMKKIYRVSPR----------IEHYG-------------------------CIVDLYSR 364
+M++ + P H G C++D+Y +
Sbjct: 275 KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGK 334
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD-LDPGVDSNYVL 423
GRL DA+++ +P + + V ++++ G AE+ +K + LD GV ++V
Sbjct: 335 CGRLVDAMSLFYQVP-QESSVTWNAIISCHGIHGH---AEKTLKLFGEMLDEGVKPDHVT 390
Query: 424 LANMYAAV--------GKWDGAGKIRRTMKGRGIQKKPGL 455
++ +A GKW R M+ GI KP L
Sbjct: 391 FVSLLSACSHSGFVEEGKW-----CFRLMQEYGI--KPSL 423
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+V W + IS H G + F M G P+H+TF++LLS C+ S + G
Sbjct: 353 SVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSH--SGFVEEGKWC 410
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT-WNAMIDGYMRRG 163
L+ + G+ + G ++D+ + G +++A M ++ + W A++ G
Sbjct: 411 FRLMQEYGIKPSLKHYG-CMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHG 469
Query: 164 DIE----SAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
+IE ++ R+F E+ ++ + L N + G +E
Sbjct: 470 NIELGKFASDRLF-EVDSKNVGYYVLLSNIYANVGKWE 506
>gi|357123975|ref|XP_003563682.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Brachypodium distachyon]
Length = 527
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 152/416 (36%), Positives = 243/416 (58%), Gaps = 5/416 (1%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W I + R GR A M G P+ +T +T ++ C+ L LG IH
Sbjct: 113 VVWNMMIRCYVRCGRYTAAIALAEEMERSGLTPDKVTLVTSVTVCSRAGD--LSLGRRIH 170
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ G+ ++ V ALLDMY K G ++ A +F+ M ++ +W ++ GY G +
Sbjct: 171 AYM--DGVFGFSLPVANALLDMYMKNGCLEEAVKLFEQMPSRNIISWTILVSGYAFAGQL 228
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
+ A +F + +D I WTA++N V+ G FEEAL FREMQ+ VEPD TI+++L C
Sbjct: 229 DKARVLFYQCSEKDLIMWTAMINACVQHGCFEEALSLFREMQMQRVEPDRFTIVTLLTCC 288
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
AN+G L G WIH++ + + K + + LID+Y++CG ++ + +VF++M R +W
Sbjct: 289 ANLGALDQGEWIHQFAVDRKMKVDAVLGTALIDMYAKCGHVKKSMEVFEQMQGRDTTAWT 348
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
SII G A NG G ALE F M++ KPD ++F G L+AC H GL+++G + F MK +
Sbjct: 349 SIICGLATNGQAGRALELFEDMERSKVKPDSITFIGVLSACCHGGLVDEGRKQFHAMKDV 408
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL-GSLLAACRTKGDIILAE 404
YR+ PRIEHY C+V+L RAG L++A ++ ++ + + + L G+LL AC+ +G++ ++E
Sbjct: 409 YRIPPRIEHYSCLVNLLGRAGLLDEAEKLIRDIQINKDAMPLFGALLTACKAQGNVEMSE 468
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
RL K + + + +L++N+YA +W+ A ++R M I+K G S IE+
Sbjct: 469 RLTKRIGEQGYQIPDVNLLMSNVYATASRWEDAIRVRSKMAHPTIKKTAGCSLIEV 524
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 169/378 (44%), Gaps = 80/378 (21%)
Query: 143 AMRVKSSFTWNA-----MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFE 197
A +K+ F W+A ++D Y G + A ++FDEMP R + W ++ +V+ G +
Sbjct: 70 AAAMKTGFWWDAYTASSLMDMYTLLGRADVARKLFDEMPHRALVVWNMMIRCYVRCGRYT 129
Query: 198 EALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLI 257
A+ EM+ SG+ PD VT+++ + C+ G L +G IH Y + F ++ V N L+
Sbjct: 130 AAIALAEEMERSGLTPDKVTLVTSVTVCSRAGDLSLGRRIHAY-MDGVFGFSLPVANALL 188
Query: 258 DLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV------------------------ 293
D+Y + GC+E A ++F++M R ++SW ++ G+A
Sbjct: 189 DMYMKNGCLEEAVKLFEQMPSRNIISWTILVSGYAFAGQLDKARVLFYQCSEKDLIMWTA 248
Query: 294 -------NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG--LRYFDIMKK 344
+G EAL F MQ + +PD + LT C++ G ++ G + F + +K
Sbjct: 249 MINACVQHGCFEEALSLFREMQMQRVEPDRFTIVTLLTCCANLGALDQGEWIHQFAVDRK 308
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM-------------------------- 378
+ +V + ++D+Y++ G ++ ++ V E M
Sbjct: 309 M-KVDAVLG--TALIDMYAKCGHVKKSMEVFEQMQGRDTTAWTSIICGLATNGQAGRALE 365
Query: 379 --------PMKPNEVVLGSLLAACRTKGDIILAER---LMKYLVDLDPGVDSNYVLLANM 427
+KP+ + +L+AC G + + MK + + P ++ +Y L N+
Sbjct: 366 LFEDMERSKVKPDSITFIGVLSACCHGGLVDEGRKQFHAMKDVYRIPPRIE-HYSCLVNL 424
Query: 428 YAAVGKWDGAGKIRRTMK 445
G D A K+ R ++
Sbjct: 425 LGRAGLLDEAEKLIRDIQ 442
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 11/210 (5%)
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI- 233
MP+RD L+ +RG F + + +++ G+ D T VL A +G L +
Sbjct: 9 MPLRDC---NLLIRTLARRGSFARVMAVYYDLRGRGLVADSFTYPFVLRA---IGVLKLS 62
Query: 234 --GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGF 291
G H +K F + ++L+D+Y+ G + AR++F M R LV WN +I +
Sbjct: 63 VEGRKAHAAAMKTGFWWDAYTASSLMDMYTLLGRADVARKLFDEMPHRALVVWNMMIRCY 122
Query: 292 AVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPR 351
G A+ M++ G PD V+ ++T CS AG + G R M ++ S
Sbjct: 123 VRCGRYTAAIALAEEMERSGLTPDKVTLVTSVTVCSRAGDLSLGRRIHAYMDGVFGFSLP 182
Query: 352 IEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
+ + ++D+Y + G LE+A+ + E MP +
Sbjct: 183 VAN--ALLDMYMKNGCLEEAVKLFEQMPSR 210
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 158/454 (34%), Positives = 253/454 (55%), Gaps = 34/454 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I + S A + M L G +PN TF +L+ C C G +H
Sbjct: 35 WNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLNACCKLLRLCE--GQELHSQ 92
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ K GLD ++ L+ +YA G MD A V
Sbjct: 93 IVKAGLDFETPLL-NGLIKLYAACGCMDYACV---------------------------- 123
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
MFDEMP D+ SW+ +++G+ + G E L+ REMQ V D T+ SV+ C +
Sbjct: 124 ---MFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGD 180
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+G L +G W+H Y+ K+ K +V + L+ +YS+CG ++ A +VFQ M +R + +W+ +
Sbjct: 181 LGVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIM 240
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+A++G +AL+ F++M++ P+ V+FT L+A SH+GL+E G + F+ M Y+
Sbjct: 241 IAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYK 300
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
++P+I+HYGC+VDL+ RAG + A ++ MP++PN V+ +LL AC+T G L E +
Sbjct: 301 ITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKGLGEHIS 360
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
+ ++ LDP NYV ++N+YA++G+W ++R MK + +K+ G SSIEI +H+F
Sbjct: 361 RKILKLDPSSPENYVFVSNVYASLGRWSSVCQVRSLMKEKAPKKQHGWSSIEINFMVHKF 420
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVPETV 501
+ G+ SH + E IY ML ++ LK G+V TV
Sbjct: 421 IMGEESHPKREKIYGMLHQMARKLKQVGHVASTV 454
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 44/293 (15%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ W++ +S + ++G+ E M + + T +++ C D L LG +
Sbjct: 133 SASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDL--GVLDLGKWV 190
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K G+ + +V++GTAL+ MY+K G +D A VF M + TW+ MI GY G
Sbjct: 191 HSYIDKEGV-KIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGH 249
Query: 165 IESAVRMFDEMP----VRDAISWTALLNGFVKRGYFEEALECFREM-------------- 206
E A+++FD M + + +++T++L+ + G E+ + F M
Sbjct: 250 DEKALQLFDAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYG 309
Query: 207 -------------------QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQD-- 245
Q +EP+ V ++L AC G G+G I R +LK D
Sbjct: 310 CMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKGLGEHISRKILKLDPS 369
Query: 246 -FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
++ V V N L R + R + + + W+SI + F V+ F+
Sbjct: 370 SPENYVFVSNVYASL-GRWSSVCQVRSLMKEKAPKKQHGWSSIEINFMVHKFI 421
>gi|297793453|ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
gi|297310446|gb|EFH40870.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 165/453 (36%), Positives = 258/453 (56%), Gaps = 20/453 (4%)
Query: 43 NPTVQ-WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
NP V +T+ I SGR A+ + RM P++ ++L C +C
Sbjct: 89 NPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHSSVLPDNYVITSVLKACG--LDEC---- 142
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
IH V KLG + VG L+++Y K G + A VFD M + MI+ Y
Sbjct: 143 REIHSQVLKLGFGSSR-SVGLKLMEIYGKSGELADAKKVFDEMPDRDQVVATVMINCYSE 201
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G I+ A+ +F ++ ++D + WTA+++G V+ +ALE FREMQ+S V
Sbjct: 202 CGCIKEALELFQDVKIKDTVCWTAMIDGLVRNREMNKALELFREMQLS-----------V 250
Query: 222 LNACANVGT-LGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
A + G +H +V Q + + V N LI++YSRCG I A++VF+ M +
Sbjct: 251 FYLPARIWVRWSSGAGVHSFVENQKMELSNFVGNALINMYSRCGDINVAKRVFKGMRDKD 310
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
++S+N++I G A++G EA+ F M GF+P+ V+ L ACSH GL++ GL F+
Sbjct: 311 VISYNTMISGLAMHGASVEAINVFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFN 370
Query: 341 IMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
M +++ V P+IEHYGCIVDL R GRLE+A +ENM ++P+ ++LG+LL+AC+ G++
Sbjct: 371 SMWRVFSVEPQIEHYGCIVDLLGRVGRLEEAYRFIENMLIEPDHIMLGALLSACKIHGNM 430
Query: 401 ILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEI 460
L E++ K L + + YVLL+++YA+ GKW + +IR +M+ GI+K+PG S+IE+
Sbjct: 431 ELGEKIAKRLFESENPDSGTYVLLSHIYASSGKWKESTEIRESMRESGIEKEPGCSTIEV 490
Query: 461 GSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493
+ IHEF GD +H E IY L+ L+ +L+
Sbjct: 491 DNQIHEFHVGDIAHPRKEAIYQRLQELNRNLRF 523
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 154/393 (39%), Gaps = 87/393 (22%)
Query: 115 RNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDE 174
+NN V + + F D A VVF+ +RV S+ I+ A +F
Sbjct: 40 KNNAQVPSIHAKIIRTFHDQD-AFVVFELIRVCSTLD------------SIDYAYDVFRY 86
Query: 175 MPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG 234
+ + +TA+++GFV G + + + M S V PD I SVL AC L
Sbjct: 87 VSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHSSVLPDNYVITSVLKACG----LDEC 142
Query: 235 LWIHRYVLKQDF--------------------------------KDNVKVCNTLIDLYSR 262
IH VLK F +D V V +I+ YS
Sbjct: 143 REIHSQVLKLGFGSSRSVGLKLMEIYGKSGELADAKKVFDEMPDRDQV-VATVMINCYSE 201
Query: 263 CGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGF---------- 312
CGCI+ A ++FQ + + V W ++I G N + +ALE F MQ F
Sbjct: 202 CGCIKEALELFQDVKIKDTVCWTAMIDGLVRNREMNKALELFREMQLSVFYLPARIWVRW 261
Query: 313 -------------KPDGVSFTG--ALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC 357
K + +F G + S G I R F M+ +S Y
Sbjct: 262 SSGAGVHSFVENQKMELSNFVGNALINMYSRCGDINVAKRVFKGMRDKDVIS-----YNT 316
Query: 358 IVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDIILAERL---MKYLV 411
++ + G +A+NV +M +PN+V L +LL AC G + + + M +
Sbjct: 317 MISGLAMHGASVEAINVFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMWRVF 376
Query: 412 DLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
++P ++ +Y + ++ VG+ + A + M
Sbjct: 377 SVEPQIE-HYGCIVDLLGRVGRLEEAYRFIENM 408
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 165/460 (35%), Positives = 258/460 (56%), Gaps = 42/460 (9%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCA---DFPSQCLFLGA 102
V W S IS + G+ A A F M G +P+ +T ++L S A D S
Sbjct: 236 VTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRS-----AK 290
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+H V + G D ++++ G A++DM Y +
Sbjct: 291 SLHCYVMRRGWDVDDIIAGNAIVDM-------------------------------YAKL 319
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQI-SGVEPDYVTIISV 221
+IE+A RMFD MPV+D++SW L+ G+++ G EA+E + MQ G++ T +SV
Sbjct: 320 SNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSV 379
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L A +++G L G+ +H +K +V V LIDLY++CG + A +F++M +R+
Sbjct: 380 LPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRST 439
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
WN+II G V+G EAL F+ MQ+EG KPD V+F L ACSHAGL++ G +FD+
Sbjct: 440 GPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDV 499
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDII 401
M+ Y + P +HY C+ D+ RAG+L++A N ++NMP+KP+ V G+LL ACR G++
Sbjct: 500 MQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVE 559
Query: 402 LAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIG 461
+ + + L +LDP YVL++NMYA VGKWDG ++R ++ + +QK PG SSIE+
Sbjct: 560 MGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVK 619
Query: 462 SGIHEFMAGDRS--HIESEHIYSMLELLSFDLKLCGYVPE 499
++ F +G+++ H + E I + L L ++ GYV +
Sbjct: 620 RSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSD 659
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 199/431 (46%), Gaps = 79/431 (18%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + +S CR+ R AEA F RM G + +T ++L C Q L L ++H
Sbjct: 137 WNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLAL--VMHVY 194
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
K GLD K F NA+ID Y + G +E
Sbjct: 195 AVKHGLD--------------------------------KELFVCNALIDVYGKLGMLEE 222
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +F M RD ++W ++++G +RG AL+ F+ M+ SGV PD +T++S+ +A A
Sbjct: 223 AQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQ 282
Query: 228 VGTLGIGLWIHRYVLKQDFK-DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
G +H YV+++ + D++ N ++D+Y++ IE A+++F M + VSWN+
Sbjct: 283 GGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNT 342
Query: 287 IIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+I G+ NG EA+E + MQK EG K +F L A SH G ++ G+R + KI
Sbjct: 343 LITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKI 402
Query: 346 YRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMP------------------------ 379
++ Y C++DLY++ G+L +A+ + E MP
Sbjct: 403 ---GLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEAL 459
Query: 380 ----------MKPNEVVLGSLLAACRTKGDIILAER---LMKYLVDLDPGVDSNYVLLAN 426
+KP+ V SLLAAC G + +M+ D+ P + +Y +A+
Sbjct: 460 TLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVP-IAKHYACMAD 518
Query: 427 MYAAVGKWDGA 437
M G+ D A
Sbjct: 519 MLGRAGQLDEA 529
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 123/238 (51%), Gaps = 8/238 (3%)
Query: 148 SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ 207
S FT +++ Y+R G I A ++FDEM RD +W A+L+G + EA+ F M
Sbjct: 102 SVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMV 161
Query: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267
GV D VT+ SVL C +G + L +H Y +K + VCN LID+Y + G +E
Sbjct: 162 GEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLE 221
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
A+ VF M R LV+WNSII G G AL+ F M+ G PD ++ +A +
Sbjct: 222 EAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIA 281
Query: 328 HAGLIEDGLR----YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
G DG + +M++ + V I IVD+Y++ +E A + ++MP++
Sbjct: 282 QGG---DGRSAKSLHCYVMRRGWDVDDIIAG-NAIVDMYAKLSNIEAAQRMFDSMPVQ 335
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 148/344 (43%), Gaps = 73/344 (21%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFL 100
V +V W + I+ + ++G EA + M H G TF+++L + + L
Sbjct: 334 VQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGA--LQQ 391
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +H L K+GL+ + V VGT L+D+YAK G++ A ++F+ M +S+ WNA+I
Sbjct: 392 GMRMHALSIKIGLNVD-VYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAII---- 446
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
+G G+ EAL F MQ G++PD+VT +S
Sbjct: 447 ---------------------------SGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVS 479
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+L AC++ G + G + F D ++V ++ + C+
Sbjct: 480 LLAACSHAGLVDQG---------RSFFDVMQVTYDIVPIAKHYACMA------------- 517
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+ G G+ E FN +Q KPD + L AC G +E G
Sbjct: 518 -----------DMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKV--- 563
Query: 341 IMKKIYRVSPR-IEHYGCIVDLYSRAGRLEDALNVVENMPMKPN 383
+ ++ + P + +Y + ++Y++ G+ D ++ V ++ + N
Sbjct: 564 ASQNLFELDPENVGYYVLMSNMYAKVGKW-DGVDEVRSLVRRQN 606
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 141/304 (46%), Gaps = 22/304 (7%)
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF-KDNVKVCNTLIDLYSRCGCIEFARQ 271
PD T S++ A + + +H L+ + +V +L+ Y R G I A +
Sbjct: 68 PDGFTFPSLIRAAPSNASAA---QLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYK 124
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
VF M +R + +WN+++ G N EA+ F M EG D V+ + L C
Sbjct: 125 VFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMC----- 179
Query: 332 IEDGLRYFDIMKKIYRVSPRI--EHYGC--IVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
+ G + ++ +Y V + E + C ++D+Y + G LE+A V M + + V
Sbjct: 180 VLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECR-DLVTW 238
Query: 388 GSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447
S+++ C +G A ++ + + GV + + L ++ +A+ + G G+ +++
Sbjct: 239 NSIISGCEQRGQTAAALKMFQGM--RGSGVSPDVLTLVSLASAIAQ-GGDGRSAKSLHCY 295
Query: 448 GIQKKPGLSSIEIGSGIHEFMAGDRSHIE-SEHIYSMLEL---LSFDLKLCGYVPETVAG 503
+++ + I G+ I + M S+IE ++ ++ + + +S++ + GY+ +A
Sbjct: 296 VMRRGWDVDDIIAGNAIVD-MYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLAN 354
Query: 504 ELYE 507
E E
Sbjct: 355 EAVE 358
>gi|225456505|ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
[Vitis vinifera]
Length = 523
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 240/398 (60%), Gaps = 6/398 (1%)
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK--SSFTWNAMIDGYMRR 162
H + K G ++ T+L+ YA +DLA + D M T N +I M+
Sbjct: 43 HAKIIKFGYGTYPSLI-TSLVSTYAHCDCLDLAHQLLDEMPYWGFDLITANLIIASLMKV 101
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G+ + A R+F +M RD ++W +++ G V+ FEEAL FREM S VEPD T SV+
Sbjct: 102 GEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVI 161
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
N CA +G+ +H ++++ + N + + LIDLYS+CG I A++VF + +
Sbjct: 162 NGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVS 221
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
WNS+I G A++G +A+ F+ M+ E PD ++F G LTACSH GL+E G RYFD+M
Sbjct: 222 VWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLM 281
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
++ Y + P++EHYG +VDL RAG +E+A +++ MPM+P+ V+ +LL+ACR + L
Sbjct: 282 RRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPEL 341
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
E + + L+ G +Y+LL+NMY ++ KWD A ++R MK G++K G S +E+G
Sbjct: 342 GEVAIAKISHLNSG---DYILLSNMYCSLEKWDSAERVREMMKRDGVRKNRGRSWVELGG 398
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IH+F AGDRSH E+ IY +LE L KL G++P T
Sbjct: 399 VIHQFKAGDRSHPETGAIYKVLEGLIRRTKLEGFMPAT 436
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 114/249 (45%), Gaps = 42/249 (16%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I R+ R EA F M P+ TF ++++GCA S ++
Sbjct: 119 VVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCARLGSS--HHAELV 176
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HGL+ + + N ++ +AL+D+Y+K GR++ A VF++++ WN+MI
Sbjct: 177 HGLMIEKKIQLNFIL-SSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMI-------- 227
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
NG G +A+ F +M++ V PD +T I +L A
Sbjct: 228 -----------------------NGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTA 264
Query: 225 CANVGTLGIGLWIHRY--VLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKR 279
C++ G + G RY ++++ + + ++ ++DL R G +E A + + M +
Sbjct: 265 CSHCGLVEQG---RRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEP 321
Query: 280 TLVSWNSII 288
+V W +++
Sbjct: 322 DIVIWRALL 330
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 162/455 (35%), Positives = 249/455 (54%), Gaps = 35/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I+ ++ R +A L F +M G PNH T +LL L G +H
Sbjct: 155 VTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGS--EHGLDPGTQLH 212
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
K G +++V VG+AL+DMYA R G +
Sbjct: 213 AFCLKYGY-QSSVYVGSALVDMYA-------------------------------RCGHM 240
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
++A FD MP + +SW AL++G ++G E AL +MQ +P + T SVL+AC
Sbjct: 241 DAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSAC 300
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++G L G W+H +++K K + NTL+D+Y++ G I+ A++VF R+ K +VSWN
Sbjct: 301 ASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWN 360
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+++ G A +G E L+ F M + G +P+ +SF LTACSH+GL+++GL YF++MKK
Sbjct: 361 TMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK- 419
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y+V P + HY VDL R G L+ A + MP++P V G+LL ACR ++ L
Sbjct: 420 YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVY 479
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ +LDP +LL+N+YA+ G+W K+R+ MK G++K+P S +EI + +H
Sbjct: 480 AAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVH 539
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F+A D +H + I E +S +K GYVP+T
Sbjct: 540 LFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDT 574
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 167/308 (54%), Gaps = 13/308 (4%)
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFT------WNAMIDGYMRRGDIESAVRMFDEM 175
+ LL + G+++ +V A V S F N +++ Y + G ++ A RMFDEM
Sbjct: 91 SKLLKECTRLGKVEQGRIVH-AHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
P +D ++WTAL+ GF + +AL F +M G +P++ T+ S+L A + L G
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGT 209
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
+H + LK ++ +V V + L+D+Y+RCG ++ A+ F M ++ VSWN++I G A G
Sbjct: 210 QLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKG 269
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKKIYRVSPRIEH 354
AL MQ++ F+P +++ L+AC+ G +E G + ++K ++ I +
Sbjct: 270 EGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGN 329
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
++D+Y++AG ++DA V + + +KP+ V ++L C G + E L ++ L
Sbjct: 330 --TLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQHG--LGKETLDRFEQMLR 384
Query: 415 PGVDSNYV 422
G++ N +
Sbjct: 385 IGIEPNEI 392
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 159/464 (34%), Positives = 255/464 (54%), Gaps = 36/464 (7%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I H ++G +A + M G P+ T +LLS CA S L G IHG
Sbjct: 470 WNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKS--LSCGKEIHGS 527
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ + G + + + +L+ +Y + G++ LA +
Sbjct: 528 MLRNGFELDE-FICISLVSLYVQCGKILLAKL---------------------------- 558
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
FD M ++ + W ++NGF + + +AL+ F +M S + PD ++II L AC+
Sbjct: 559 ---FFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQ 615
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
V L +G +H + +K ++ V +LID+Y++CGC+E ++ +F R+H + V+WN +
Sbjct: 616 VSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVL 675
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+ ++G +A+E F SMQ GF+PD V+F LTAC+HAGL+ +GL Y M+ ++
Sbjct: 676 ITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFG 735
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLM 407
+ P++EHY C+VD+ RAGRL +AL +V +P KP+ + SLL++CR D+ + E++
Sbjct: 736 IKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVA 795
Query: 408 KYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
L++L P NYVL++N YA +GKWD K+R+ MK G+QK G S IEIG + F
Sbjct: 796 NKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRF 855
Query: 468 MAGDRSHIESEHIYSMLELLSFDLKLCGYVPET--VAGELYEND 509
+ GD S ++S I L + GY P+T V EL E++
Sbjct: 856 LVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDE 899
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 158/327 (48%), Gaps = 49/327 (14%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
NA + GY + G + A +F M + SW AL+ G V+ G+ +AL+ + M+ SG+E
Sbjct: 440 NAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLE 499
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD TI S+L+ACA + +L G IH +L+ F+ + +C +L+ LY +CG I A+
Sbjct: 500 PDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLF 559
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F M ++ LV WN++I GF+ N F +AL+ F+ M PD +S GAL ACS +
Sbjct: 560 FDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSAL 619
Query: 333 EDG--LRYFDIMKKIYRVSPRIEHYGC-IVDLYSRAGRLEDALNV--------------- 374
G L F + + S C ++D+Y++ G +E + N+
Sbjct: 620 RLGKELHCFAVKSHLTEHS----FVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVL 675
Query: 375 -------------------VENMPMKPNEVVLGSLLAACRTKGDIILAERL-----MKYL 410
++N +P+ V +LL AC G ++AE L M+ L
Sbjct: 676 ITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAG--LVAEGLEYLGQMQSL 733
Query: 411 VDLDPGVDSNYVLLANMYAAVGKWDGA 437
+ P ++ +Y + +M G+ + A
Sbjct: 734 FGIKPKLE-HYACVVDMLGRAGRLNEA 759
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRM-TLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
W + +S + R+ +A F M +L P++ T ++ C + LG +HG
Sbjct: 163 WNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYD--VRLGEAVHG 220
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
K + ++V VG AL+ MY KF G +E
Sbjct: 221 FALKTKV-LSDVFVGNALIAMYGKF-------------------------------GFVE 248
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM--QISGVEPDYVTIISVLNA 224
SAV++FD+MP R+ +SW +++ ++ G FEE+ F+ + G+ PD T+++V+
Sbjct: 249 SAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPL 308
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA G + +G+ H LK +KV ++L+D+YS+CG + AR +F +++ ++SW
Sbjct: 309 CARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISW 367
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTAC 326
NS+I G++ + A E MQ E K + V+ L C
Sbjct: 368 NSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVC 410
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 155/343 (45%), Gaps = 46/343 (13%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTN---PNHITFITLLSGCADFPSQCLFLGA 102
V W +S+ C + E + + L+G P+ T +T++ CA + LG
Sbjct: 263 VSW-NSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGE--VRLGM 319
Query: 103 MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
+ HGL KLGL + V ++LLDMY+K G + A V+FD
Sbjct: 320 VFHGLALKLGL-CGELKVNSSLLDMYSKCGYLCEARVLFDTNE----------------- 361
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTIISV 221
++ ISW +++ G+ K F A E R+MQ+ V+ + VT+++V
Sbjct: 362 ---------------KNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNV 406
Query: 222 LNACANVGTLGIGLWIHRYVLKQDF-KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
L C IH Y L+ F + + V N + Y++CG + +A VF M +
Sbjct: 407 LPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKM 466
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
+ SWN++I G NGF +AL+ + M+ G +PD + L+AC+ + G +
Sbjct: 467 VSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGK---E 523
Query: 341 IMKKIYRVSPRIEHYGCI--VDLYSRAGRLEDALNVVENMPMK 381
I + R ++ + CI V LY + G++ A +NM K
Sbjct: 524 IHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEK 566
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 169/388 (43%), Gaps = 57/388 (14%)
Query: 5 ATATILPQP----FLPHQQNPNQNLTTT-PQISIQTNNSKSTVNPTV---QWTSSISRH- 55
+ T+ P P F H QN+ P S S +P + + + S+H
Sbjct: 2 CSVTLTPPPLSFSFHHHHNLTLQNINNKIPFHSFTPPKSSHLFSPIISSHKKQQNASKHF 61
Query: 56 ---CRSGRIAEAALEFTRMTLH------GTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
C +G + +A F + L+ + P + + LL C ++ + + +G IH
Sbjct: 62 HNLCNTGNLNQA-FNFLQSNLNDVVSSSNSKPKQLIGL-LLQLCGEYKN--IEIGRKIHN 117
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
+ +N+V++ T L+ MY+ + +VF+A R K+ F WNA
Sbjct: 118 FISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNA------------ 165
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNAC 225
LL+G+++ F +A+ F EM ++ PD T+ V+ AC
Sbjct: 166 -------------------LLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKAC 206
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
V + +G +H + LK +V V N LI +Y + G +E A +VF +M +R LVSWN
Sbjct: 207 VGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWN 266
Query: 286 SIIVGFAVNGFVGEALEYFNSMQK--EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
S++ NG E+ F + EG PD + + C+ G + G+ + +
Sbjct: 267 SVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLAL 326
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDA 371
K+ + ++ ++D+YS+ G L +A
Sbjct: 327 KL-GLCGELKVNSSLLDMYSKCGYLCEA 353
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 7/237 (2%)
Query: 221 VLNACANVGTLGIGLWIHRYV-LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
+L C + IG IH ++ F+++V + L+ +YS C + VF ++
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
L WN+++ G+ N +A+ F M F PD + + AC + G
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
K +V + ++ +Y + G +E A+ V + MP + N V S++ AC G
Sbjct: 219 HGFALKT-KVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQR-NLVSWNSVMYACLENG 276
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
+ L K L++ D G+ + +A M + G++R M G+ K GL
Sbjct: 277 VFEESYGLFKGLLNGDEGLMPD---VATMVTVIPLCARQGEVRLGMVFHGLALKLGL 330
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 261/496 (52%), Gaps = 50/496 (10%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I + + + M P+ TF L G L G +
Sbjct: 75 WNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTR--DMALQHGKELLNH 132
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR----- 162
K G D +N+ V A + M++ G +DLA VFD TWN M+ GY R
Sbjct: 133 AVKHGFD-SNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQFKI 191
Query: 163 --------------------------------------GDIESAVRMFDEMPVRDAISWT 184
G+++ A +FD M RD +SWT
Sbjct: 192 SKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMKTRDVVSWT 251
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
A+++G+++ +F AL FREMQ+S V+PD T++S+L ACA +G L +G W+ + K
Sbjct: 252 AMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVKTCIDKN 311
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
K++ V N L+D+Y +CG + A++VF+ M+++ +W ++IVG A+NG EAL F
Sbjct: 312 SNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALAMF 371
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
++M + PD +++ G L AC +++ G +F M + + P + HYGC+VDL
Sbjct: 372 SNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLLGC 427
Query: 365 AGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLL 424
G LE+AL V+ NMP+KPN +V GS L ACR ++ LA+ K +++L+P + YVLL
Sbjct: 428 VGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQILELEPENGAVYVLL 487
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
N+YAA KW+ ++R+ M RGI+K PG S +E+ ++EF+AGD+SH +S+ IY+ L
Sbjct: 488 CNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKL 547
Query: 485 ELLSFDLKLCGYVPET 500
E + L GY P+T
Sbjct: 548 ENMMQGLIKAGYSPDT 563
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 97/251 (38%), Gaps = 51/251 (20%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ I + R A F M + P+ T +++L CA LGA+
Sbjct: 247 VVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACA-------LLGALE 299
Query: 105 HGLVCKLGLDRN----NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G K +D+N + VG AL+DMY K G + A VF M K FTW MI G
Sbjct: 300 LGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLA 359
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
G + EEAL F M + V PD +T I
Sbjct: 360 ING-------------------------------HGEEALAMFSNMIEASVTPDEITYIG 388
Query: 221 VLNAC-ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
VL AC + G + ++ K V ++DL GC+E A +V M
Sbjct: 389 VLCACMVDKGK----SFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMP-- 442
Query: 280 TLVSWNSIIVG 290
V NSI+ G
Sbjct: 443 --VKPNSIVWG 451
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 126/298 (42%), Gaps = 25/298 (8%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G++ A ++FD +P W ++ G+ K + E + + M S ++PD T L
Sbjct: 55 GNMNYAHQVFDTIPHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSL 114
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
L G + + +K F N+ V I ++S CG ++ A +VF +V
Sbjct: 115 KGFTRDMALQHGKELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVV 174
Query: 283 SWNSIIVGF-AVNGF-------VGEALEYFNSMQ--KEGFK-PDGVSFTGALTACSHAGL 331
+WN ++ G+ V F V A ++ K FK +G AC G
Sbjct: 175 TWNIMLSGYNRVKQFKISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAAC---GE 231
Query: 332 IEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLG 388
+++ FD MK VS + ++D Y R AL + M M KP+E +
Sbjct: 232 MDEAQGVFDNMKTRDVVS-----WTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMV 286
Query: 389 SLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV--LLANMYAAVGKWDGAGKIRRTM 444
S+L AC G + L E +K +D + + ++V L +MY G A K+ + M
Sbjct: 287 SILIACALLGALELGE-WVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEM 343
>gi|242042285|ref|XP_002468537.1| hypothetical protein SORBIDRAFT_01g047570 [Sorghum bicolor]
gi|241922391|gb|EER95535.1| hypothetical protein SORBIDRAFT_01g047570 [Sorghum bicolor]
Length = 495
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 238/396 (60%), Gaps = 13/396 (3%)
Query: 110 KLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAV 169
+LGL ++ V +L+ MYA D A VFD + + +WNA++DGY + D+ +A
Sbjct: 87 RLGLLPADLHVANSLVHMYAACAMPDHAHRVFDEIPRPNLVSWNALLDGYAKCRDLPAAR 146
Query: 170 RMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS----------GVEPDYVTII 219
++F MP RD +SW+A+++G VK G EAL F M+ + G + VT++
Sbjct: 147 QVFARMPQRDVVSWSAMIDGCVKCGEHREALALFEMMENAAARSVEDGGGGARANDVTMV 206
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM--H 277
SVL ACAN+G L G W+HR + ++ F N+K+ +L+D+Y++CG I A ++F +
Sbjct: 207 SVLGACANLGDLERGRWVHRCLRERGFPLNLKLATSLVDMYAKCGAIHEALEMFWAVPVE 266
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
++ WN++I G AV+G E++E F MQ G PD +++ L+AC H GL+++ +
Sbjct: 267 STDVLIWNAVIGGLAVHGMATESVEIFQEMQCAGVAPDEITYLCLLSACVHGGLVDEAWK 326
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
+F ++ + P +EHY C+VD+ RAGRLE+ VV++MPMKP+ VLG+ L AC
Sbjct: 327 FFRSLEA-QGLRPHVEHYACLVDVLGRAGRLEEVYGVVKSMPMKPSVSVLGAFLNACHLH 385
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G + L E + + LV L P D Y+ L+N+YA +W A K R+ M+ RG++K PG S
Sbjct: 386 GWVELGEVVGRQLVQLQPDHDGRYIGLSNIYAVARRWQEAKKARKVMEDRGVKKVPGFSE 445
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493
I +G G+ F A D++H S IY +L L++ ++K+
Sbjct: 446 IHVGGGLSRFTAQDKTHPGSVEIYDLLNLIAMEMKM 481
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 158/448 (35%), Positives = 251/448 (56%), Gaps = 13/448 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLL-SGCADFPSQCLFLGAMI 104
V WT+ I+ + R G++ EA + +M L+ +G D SQ
Sbjct: 298 VSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFS----- 352
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
L++ + + +++ Y + GRM A +F M VK++ +WN MI GY + G+
Sbjct: 353 -------QLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGE 405
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ A +F+ M VR+ ISW +L+ GF++ G + +AL+ M G +PD T L++
Sbjct: 406 MDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSS 465
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CAN+ L +G +H +LK + +++ V N LI +Y++CG ++ A +VF+ + L+SW
Sbjct: 466 CANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISW 525
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
NS+I G+A+NG+ EA F M EG PD V+F G L+ACSHAGL G+ F M +
Sbjct: 526 NSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIE 585
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ + P EHY C+VDL R GRLE+A N+V M +K N + GSLLAACR ++ L +
Sbjct: 586 GFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGK 645
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
L++L+P SNY+ L+NM+A G+W+ ++R M+ R K PG S IE+ + I
Sbjct: 646 IAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQI 705
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLK 492
F++ D + +E I +L LS ++
Sbjct: 706 QNFVSDDPGKLRTESIKIILNTLSAHMR 733
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 210/488 (43%), Gaps = 96/488 (19%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL---- 100
T W + I+ + + GR +A F +M + + +++ ++L+G L +
Sbjct: 142 TACWNAMIAGYAKKGRFDDAEKVFEKMPV----KDLVSYNSMLAGYTQNGKMGLAMKFFE 197
Query: 101 ----------GAMIHGLV--CKLG--------LDRNNVMVGTALLDMYAKFGRMDLATVV 140
M+ G V C LG + N + +L +A+ G++ A +
Sbjct: 198 RMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKL 257
Query: 141 FDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEAL 200
FD M K+ +WNAMI Y++ I+ AV++F E P +D +SWT ++NG+V+ G +EA
Sbjct: 258 FDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAR 317
Query: 201 ECFREMQISGV---------------------------EPDYVTIISVLNACANVGTLGI 233
E + +M V + D + S++ G +
Sbjct: 318 EVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSE 377
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV 293
L + R Q N NT+I Y++ G ++ A ++F+ M R ++SWNS+I GF
Sbjct: 378 ALNLFR----QMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQ 433
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD-IMKKIY------ 346
NG +AL+ M +EG KPD +F +L++C++ ++ G + + I+K Y
Sbjct: 434 NGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFV 493
Query: 347 ------------------RVSPRIE-----HYGCIVDLYSRAGRLEDALNVVENMPMK-- 381
+V IE + ++ Y+ G +A E M +
Sbjct: 494 SNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGT 553
Query: 382 -PNEVVLGSLLAACRTKGDIILAERLMKYLVD---LDPGVDSNYVLLANMYAAVGKWDGA 437
P+EV +L+AC G L K +++ ++P + +Y L ++ +G+ + A
Sbjct: 554 VPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEP-LAEHYSCLVDLLGRMGRLEEA 612
Query: 438 GKIRRTMK 445
I R MK
Sbjct: 613 FNIVRGMK 620
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 132/297 (44%), Gaps = 59/297 (19%)
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAI 181
+++ ++AK GR+ A +FD M ++ +WN MI GY+ +E A ++FD M RD
Sbjct: 52 NSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNF 111
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
SW ++ + ++G E+A E F + PD + AC N G Y
Sbjct: 112 SWALMITCYTRKGMLEKARELFE------LVPDKLD-----TACWNAMIAG-------YA 153
Query: 242 LKQDFKDNVKVC-----------NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
K F D KV N+++ Y++ G + A + F+RM +R +VSWN ++ G
Sbjct: 154 KKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAG 213
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK------- 343
F N +G A E F + P+ VS+ L + G I + + FD M
Sbjct: 214 FVNNCDLGSAWELFEKIP----DPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSW 269
Query: 344 -----------------KIYRVSPRIE--HYGCIVDLYSRAGRLEDALNVVENMPMK 381
K+++ +P + + +++ Y R G+L++A V MP K
Sbjct: 270 NAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYK 326
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 143/297 (48%), Gaps = 18/297 (6%)
Query: 114 DRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFD 173
D+ + A++ YAK GR D A VF+ M VK ++N+M+ GY + G + A++ F+
Sbjct: 138 DKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFE 197
Query: 174 EMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGI 233
M R+ +SW ++ GFV A E F ++ +P+ V+ +++L A G +
Sbjct: 198 RMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIP----DPNAVSWVTMLCGFARHGKIVE 253
Query: 234 GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAV 293
R + + NV N +I Y + I+ A ++F+ + VSW ++I G+
Sbjct: 254 A----RKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVR 309
Query: 294 NGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIE 353
G + EA E +N M + D + T ++ G I++ + F + K +
Sbjct: 310 VGKLDEAREVYNQMPYK----DVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAIC---- 361
Query: 354 HYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL 410
+ ++ Y ++GR+ +ALN+ MP+K N V ++++ G++ A + + +
Sbjct: 362 -WNSMIAGYCQSGRMSEALNLFRQMPVK-NAVSWNTMISGYAQAGEMDRATEIFEAM 416
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 155/335 (46%), Gaps = 22/335 (6%)
Query: 130 KFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNG 189
K G++D A VF + K+ T+N+M+ + + G + A ++FD+M R+ +SW ++ G
Sbjct: 29 KQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAG 88
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
++ EEA + F M E D + ++ G L + V K +
Sbjct: 89 YLHNNMVEEAHKLFDLM----AERDNFSWALMITCYTRKGMLEKARELFELVPD---KLD 141
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK 309
N +I Y++ G + A +VF++M + LVS+NS++ G+ NG +G A+++F M +
Sbjct: 142 TACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAE 201
Query: 310 EGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLE 369
+ G + C D +++ +KI P + ++ ++R G++
Sbjct: 202 RNVVSWNLMVAGFVNNC-------DLGSAWELFEKI--PDPNAVSWVTMLCGFARHGKIV 252
Query: 370 DALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS-NYVLLANMY 428
+A + + MP K N V +++AA I A +L K P D ++ + N Y
Sbjct: 253 EARKLFDRMPCK-NVVSWNAMIAAYVQDLQIDEAVKLFKE----TPYKDCVSWTTMINGY 307
Query: 429 AAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
VGK D A ++ M + + K L S I +G
Sbjct: 308 VRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNG 342
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 19/184 (10%)
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
N+GT R L+Q NV N I + G I+ A++VF + + ++NS
Sbjct: 4 NIGT--------RSTLEQS--KNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNS 53
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
++ FA NG V +A + F+ M + VS+ + H ++E+ + FD+M +
Sbjct: 54 MVTVFAKNGRVSDARQLFDKMSQRNL----VSWNTMIAGYLHNNMVEEAHKLFDLMAERD 109
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
S + ++ Y+R G LE A + E +P K + +++A KG AE++
Sbjct: 110 NFS-----WALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKV 164
Query: 407 MKYL 410
+ +
Sbjct: 165 FEKM 168
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 163/474 (34%), Positives = 264/474 (55%), Gaps = 45/474 (9%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLH---------GTNPNHITFITLLSGCADFPSQ 96
V WTS I+ + ++ EA + F GT+ + + I++LS C+ ++
Sbjct: 149 VTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNK 208
Query: 97 CLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMI 156
+ G +HG+ K+GLD+ M V+ N ++
Sbjct: 209 AVSEG--VHGVAIKVGLDK---------------------------VMGVE-----NTLL 234
Query: 157 DGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDY 215
D Y + G++ + ++FD+M +D +SW +++ + + G +A E F M + G + +
Sbjct: 235 DAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNE 294
Query: 216 VTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
VT+ ++L ACA+ G L +G+ +H V+K + +NV + ++ID+Y +CG E AR F
Sbjct: 295 VTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDG 354
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M ++ + SW ++I G+ ++GF EAL+ F M G KP+ ++F L ACSHAG +E+G
Sbjct: 355 MKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEG 414
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACR 395
R+F+ M Y V P +EHYGC+VDL RAG +++A N++++M ++ + V+ GSLLAACR
Sbjct: 415 WRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACR 474
Query: 396 TKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGL 455
D+ LAE + L LDP YVLLAN+YA G+W ++R +K RG+ K PG
Sbjct: 475 IHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGY 534
Query: 456 SSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
S +E+ +H F+ GD+ H + E IY LE LS L+ GYVP +A L++ D
Sbjct: 535 SLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVP-NMASVLHDVD 587
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 195/439 (44%), Gaps = 65/439 (14%)
Query: 47 QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHG 106
W S I+ R G E+ F+ M PN TF + C+ L G H
Sbjct: 49 SWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFD--LNSGKQAHQ 106
Query: 107 LVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIE 166
G + +++ V +AL+DMY+K G++ A V+FD + ++ TW ++I GY++ D
Sbjct: 107 QALVFGFE-SDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAH 165
Query: 167 SAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
A+ +F E + G EE G D V +ISVL+AC+
Sbjct: 166 EALMVFKEFLFEKS------------EGNGEEV----------GTSVDSVAMISVLSACS 203
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
V + +H +K + V NTL+D Y++CG + +R+VF M ++ +VSWNS
Sbjct: 204 RVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNS 263
Query: 287 IIVGFAVNGFVGEALEYFNSMQKE-GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+I +A NG +A E F+ M K G K + V+ + L AC+H G + G+ D + K+
Sbjct: 264 MIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKM 323
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP-------------------------- 379
V+ I I+D+Y + G+ E A N + M
Sbjct: 324 GYVNNVIMATS-IIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDV 382
Query: 380 --------MKPNEVVLGSLLAACRTKGDIILAERL---MKYLVDLDPGVDSNYVLLANMY 428
+KPN + S+LAAC G + R M + +++PGV+ +Y + ++
Sbjct: 383 FYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVE-HYGCMVDLL 441
Query: 429 AAVGKWDGAGKIRRTMKGR 447
G A + ++MK R
Sbjct: 442 GRAGYIKEAYNLIKSMKVR 460
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 51/335 (15%)
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIH 238
D SW +L+ + G E+L F M+ ++P+ T + +C+ + L G H
Sbjct: 46 DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAH 105
Query: 239 RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 298
+ L F+ ++ V + LID+YS+CG + AR +F + +R +V+W S+I G+ N
Sbjct: 106 QQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAH 165
Query: 299 EALEYFNSM---------QKEGFKPDGVSFTGALTACS-----------HAGLIEDGL-- 336
EAL F ++ G D V+ L+ACS H I+ GL
Sbjct: 166 EALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDK 225
Query: 337 ------RYFDIMKKIYRVS-----------PRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
D K VS + + ++ +Y++ G DA V M
Sbjct: 226 VMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGML 285
Query: 380 M----KPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVG 432
K NEV L +LL AC +G + + L ++ + G +N ++ + +MY G
Sbjct: 286 KAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKM--GYVNNVIMATSIIDMYCKCG 343
Query: 433 KWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEF 467
+ + A MK + ++ + + G G+H F
Sbjct: 344 QAEMARNAFDGMKEKNVRSWTAMIA---GYGMHGF 375
>gi|147860852|emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
Length = 562
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 240/398 (60%), Gaps = 6/398 (1%)
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK--SSFTWNAMIDGYMRR 162
H + K G ++ T+L+ YA +DLA + D M T N +I M+
Sbjct: 82 HAKIIKFGYGTYPSLI-TSLVSTYAHCDCLDLAHQLLDEMPYWGFDLITANLIIASLMKV 140
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G+ + A R+F +M RD ++W +++ G V+ FEEAL FREM S VEPD T SV+
Sbjct: 141 GEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVI 200
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
N CA +G+ +H ++++ + N + + LIDLYS+CG I A++VF + +
Sbjct: 201 NGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVS 260
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
WNS+I G A++G +A+ F+ M+ E PD ++F G LTACSH GL+E G RYFD+M
Sbjct: 261 VWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLM 320
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
++ Y + P++EHYG +VDL RAG +E+A +++ MPM+P+ V+ +LL+ACR + L
Sbjct: 321 RRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPEL 380
Query: 403 AERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGS 462
E + + L+ G +Y+LL+NMY ++ KWD A ++R MK G++K G S +E+G
Sbjct: 381 GEVAIAKISHLNSG---DYILLSNMYCSLEKWDSAERVREMMKRDGVRKNRGRSWVELGG 437
Query: 463 GIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
IH+F AGDRSH E+ IY +LE L KL G++P T
Sbjct: 438 VIHQFKAGDRSHPETGAIYKVLEGLIRRTKLEGFMPAT 475
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 114/249 (45%), Gaps = 42/249 (16%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I R+ R EA F M P+ TF ++++GCA S ++
Sbjct: 158 VVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCARLGSS--HHAELV 215
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HGL+ + + N ++ +AL+D+Y+K GR++ A VF++++ WN+MI
Sbjct: 216 HGLMIEKKIQLNFIL-SSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMI-------- 266
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
NG G +A+ F +M++ V PD +T I +L A
Sbjct: 267 -----------------------NGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTA 303
Query: 225 CANVGTLGIGLWIHRY--VLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKR 279
C++ G + G RY ++++ + + ++ ++DL R G +E A + + M +
Sbjct: 304 CSHCGLVEQG---RRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEP 360
Query: 280 TLVSWNSII 288
+V W +++
Sbjct: 361 DIVIWRALL 369
>gi|357112521|ref|XP_003558057.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 656
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 255/425 (60%), Gaps = 5/425 (1%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WT+ IS R+ AEA F+ M + + ++++S CA S+ + G M HGL
Sbjct: 234 WTAMISCFERNDMFAEALHVFSCMRRERWHVDEPLMVSVVSACAQ--SEVIQNGQMCHGL 291
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V + GL + V V AL+ MY+ + A +FD+ ++WN+MI GY++ G ++
Sbjct: 292 VIRAGL-CSQVNVQNALIHMYSSCLDVFAARRLFDSGECLDQYSWNSMIAGYLKNGHVKD 350
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A+ +F MP +D +SW+ +++G V+ +AL F MQ G+ PD VTI+SV++AC N
Sbjct: 351 AMALFSAMPNKDNVSWSTVISGCVQNNQSSDALTVFDNMQAQGIRPDEVTIVSVISACTN 410
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ L G +H Y+ + + ++ + +LI++Y +CGC+E A + F M ++ WN++
Sbjct: 411 LSALEKGKSVHEYIKQNQYYVSLVLGTSLINMYMKCGCLEAALEAFNIMEEKGTPCWNAV 470
Query: 288 IVGFAVNGFVGEALEYFNSMQ-KEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
IVG A+NG V ++L+ F+ M+ + P+ ++FTG L+AC HAGL+++G +F +M+ Y
Sbjct: 471 IVGLAMNGLVMKSLDMFSEMEASDTATPNEITFTGVLSACRHAGLVDEGRHFFKLMQHRY 530
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
++ P I HYGC+VDL RAG +++A +++++MPM P+ G+LL AC G+ + ER+
Sbjct: 531 QIVPNIRHYGCMVDLLGRAGYVKEAEDMIQSMPMSPDVPAWGALLGACWKHGEYEVGERV 590
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHE 466
+ LV+ DP D +L+N+YA G W +R +MK R +QK G S ++ S +E
Sbjct: 591 GRKLVNRDPLHDGFQTMLSNIYAKEGMWQSVDDLRGSMKQRHVQKVSGHSVVK-SSHSYE 649
Query: 467 FMAGD 471
+AGD
Sbjct: 650 ILAGD 654
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 166/419 (39%), Gaps = 103/419 (24%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA 137
P+ T L + CA + + G +H G +N+ + AL+ MY+ G + A
Sbjct: 101 PDSYTHPILAAACAS--RKDVIEGRQVHAHAVSHGFG-DNLYLRNALIFMYSACGCLWDA 157
Query: 138 TVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMP--------------------- 176
VFDA V + +WN ++ Y+ GD++ AV +F +MP
Sbjct: 158 RRVFDAGPVWDAVSWNTILAAYVHAGDVDQAVEVFAQMPKRNATAVSSMVSLFGRRGMVD 217
Query: 177 ----------VRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA 226
RD +WTA+++ F + F EAL F M+ D ++SV++ACA
Sbjct: 218 EARRVFDAAECRDIFTWTAMISCFERNDMFAEALHVFSCMRRERWHVDEPLMVSVVSACA 277
Query: 227 NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ G H V++ V V N LI +YS C + AR++F SWNS
Sbjct: 278 QSEVIQNGQMCHGLVIRAGLCSQVNVQNALIHMYSSCLDVFAARRLFDSGECLDQYSWNS 337
Query: 287 IIVGFAVNGFV-------------------------------GEALEYFNSMQKEGFKPD 315
+I G+ NG V +AL F++MQ +G +PD
Sbjct: 338 MIAGYLKNGHVKDAMALFSAMPNKDNVSWSTVISGCVQNNQSSDALTVFDNMQAQGIRPD 397
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKK-IYRVSPRIEHYGCIVDLYSRAGRLEDALNV 374
V+ ++AC++ +E G + +K+ Y VS + ++++Y + G LE AL
Sbjct: 398 EVTIVSVISACTNLSALEKGKSVHEYIKQNQYYVSLVLG--TSLINMYMKCGCLEAALEA 455
Query: 375 VENMPMK-----------------------------------PNEVVLGSLLAACRTKG 398
M K PNE+ +L+ACR G
Sbjct: 456 FNIMEEKGTPCWNAVIVGLAMNGLVMKSLDMFSEMEASDTATPNEITFTGVLSACRHAG 514
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 242/413 (58%), Gaps = 4/413 (0%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WT+ +S R+ EA F+ M G + +++++ CA S + G + HGL
Sbjct: 237 WTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAK--SGVIQNGEVCHGL 294
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V + GL + V V L+ MY+ + A +FD F+WN+MI GY++ G +E
Sbjct: 295 VVRAGLG-SRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVED 353
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +FD MP +D +SW+A++ G V EAL F M+ ++PD VT++SV++AC+N
Sbjct: 354 AKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSN 413
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ L G +H Y+ K + + + +LID+Y +CGC+E A +VF + ++ WN++
Sbjct: 414 LSALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLEEKGTPCWNAV 473
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFK-PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
IVG A+NG V +L+ F+ M+ G P+ ++FTG L+AC H GL+E+G ++F +M+ Y
Sbjct: 474 IVGLAMNGLVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLMQNKY 533
Query: 347 RVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERL 406
++ P I HYGC+VDL RAG + +A +++++MPM P+ G+LL AC GD + ER+
Sbjct: 534 QIVPNIRHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPAWGALLGACWKHGDSEVGERV 593
Query: 407 MKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
K LV LDP D +L+N+YA+ G W +R +MK + + K G S +E
Sbjct: 594 GKKLVKLDPDHDGFQTMLSNIYASEGMWQCVKDLRGSMKQQHVAKVAGCSMVE 646
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 166/407 (40%), Gaps = 99/407 (24%)
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +H K G +N+ + AL+ MY+ G + A VFDA V + +WN ++ Y+
Sbjct: 125 GLQVHSHSVKHGFS-DNLYLRNALMHMYSACGCVASARRVFDAGPVWDAVSWNTILATYV 183
Query: 161 RRGDIESAVRMFDEMPV-------------------------------RDAISWTALLNG 189
R GD+E AV++F MP RDA +WTA+++
Sbjct: 184 RDGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEARGVFDGAEHRDAFTWTAMVSC 243
Query: 190 FVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDN 249
F + F EAL F +M+ G D ++SV+ ACA G + G H V++
Sbjct: 244 FERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVRAGLGSR 303
Query: 250 VKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV------------ 297
V V N LI +YS C + AR++F SWNS+I G+ NG V
Sbjct: 304 VNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAKALFDVMPD 363
Query: 298 -------------------GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
EAL F+SM+ KPD V+ ++ACS+ +E G
Sbjct: 364 KDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQGKLV 423
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK----------------- 381
+ ++K Y+ + I ++D+Y + G +E AL V + + K
Sbjct: 424 HEYIRK-YQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLEEKGTPCWNAVIVGLAMNGL 482
Query: 382 ------------------PNEVVLGSLLAACRTKGDIILAERLMKYL 410
PNE+ +L+ACR G + + K +
Sbjct: 483 VTRSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLM 529
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 128/280 (45%), Gaps = 17/280 (6%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
LL ++A+F L + A R+ FT +A + + ++++F + +A +
Sbjct: 20 LLQIHAQFLASGLLADAYAASRLLL-FTTSATAARLLPH-PLHHSLQLFGLVRSPNAFTC 77
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
LL +++G+ + M + PD T + ACA G + GL +H + +K
Sbjct: 78 NTLLKAALRQGFPHLCFPLYASMPAA---PDTYTHPLLAAACAARGDVREGLQVHSHSVK 134
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
F DN+ + N L+ +YS CGC+ AR+VF VSWN+I+ + +G V +A++
Sbjct: 135 HGFSDNLYLRNALMHMYSACGCVASARRVFDAGPVWDAVSWNTILATYVRDGDVEQAVKV 194
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F M + + + + + G++E+ FD + + + +V +
Sbjct: 195 FTRMPERSAA----AVSAMVALFARRGMVEEARGVFDGAEHRDAFT-----WTAMVSCFE 245
Query: 364 RAGRLEDALNVVENMPMKP---NEVVLGSLLAACRTKGDI 400
R +AL V +M + +E V+ S++AAC G I
Sbjct: 246 RNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKSGVI 285
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 154/455 (33%), Positives = 252/455 (55%), Gaps = 34/455 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I+ ++G E F M P+ T+ ++L CA Q L G I
Sbjct: 449 AVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAG--RQALNTGMEI 506
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H + K G+ FD SF A++D Y + G
Sbjct: 507 HTRIIKSGMG--------------------------FD------SFVGAALVDMYCKCGM 534
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
IE A ++ D + +SW A+++GF E+A + F M GV PD T +VL+
Sbjct: 535 IEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDT 594
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CAN+ T+G+G IH ++KQ+ + +V +C+TL+D+YS+CG ++ ++ +F++ R V+W
Sbjct: 595 CANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTW 654
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+++ G+A +G EAL+ F SMQ KP+ +F L AC+H GL++ GL YFD+M
Sbjct: 655 NAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLS 714
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P+ EHY C+VD+ R+GR+++ALN+V+ MP + + V+ +LL+ C+ G++ +AE
Sbjct: 715 EYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAE 774
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ + L+ LDP S VLL+N+YA G W ++R+ M+ ++K+PG S IE+ +
Sbjct: 775 KATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEV 834
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
H F+ GD+ H E IY L +L +++ GY+P+
Sbjct: 835 HAFLVGDKGHPRDEEIYEKLGVLIGEMQSVGYIPD 869
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 196/465 (42%), Gaps = 101/465 (21%)
Query: 25 LTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFI 84
L++ P+ S+Q+ N+ I + RS R +A F + G + IT
Sbjct: 340 LSSMPKCSLQSYNA------------IIVGYARSDRGFQALKSFQLLLKTGLGFDEITLS 387
Query: 85 TLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAM 144
L+ CA G +HGL K + +N+ V A+LDMY K +
Sbjct: 388 GALNACASIRGD--LEGRQVHGLAVK-SISMSNICVANAILDMYGKCKAL---------- 434
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFR 204
A +FD M RDA+SW A++ + G EE L F
Sbjct: 435 ---------------------AEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFA 473
Query: 205 EMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
M S +EPD T SVL ACA L G+ IH ++K + V L+D+Y +CG
Sbjct: 474 SMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCG 533
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
IE A ++ R ++T+VSWN+II GF++ +A ++F+ M + G PD ++ L
Sbjct: 534 MIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLD 593
Query: 325 ACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC--IVDLYSRAGRLED------------ 370
C++ + G + I +I + + + Y C +VD+YS+ G ++D
Sbjct: 594 TCANLATVGLGKQ---IHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRD 650
Query: 371 -------------------ALNVVENMPM---KPNEVVLGSLLAACRTKG---------D 399
AL + E+M + KPN S+L AC G D
Sbjct: 651 FVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFD 710
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
++L+E LDP + +Y + ++ G+ D A + + M
Sbjct: 711 VMLSE------YGLDPQSE-HYSCMVDILGRSGRIDEALNLVQKM 748
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 175/370 (47%), Gaps = 14/370 (3%)
Query: 120 VGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRD 179
V L+ MY K +D A VFD M ++ ++N++I GY G+++ A + F EMP RD
Sbjct: 86 VSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERD 145
Query: 180 AISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHR 239
+SW ++++GF++ G ++++ F EM GV D ++ VL AC + +G+ +H
Sbjct: 146 VVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHG 205
Query: 240 YVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 299
V+K F +V + L+ +Y++C ++ + VF + ++ VSW+++I G N E
Sbjct: 206 LVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVE 265
Query: 300 ALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIV 359
LE F MQ G + +C+ + G K S I +
Sbjct: 266 GLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTA-TL 324
Query: 360 DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS 419
D+Y++ GR+ DA V+ +MP + ++ R+ + L + + L G+
Sbjct: 325 DMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGF---QALKSFQLLLKTGLGF 381
Query: 420 NYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ----KKPGLSSIEIGSGIHEFMAGDRSHI 475
+ + L+ G + IR ++GR + K +S+I + + I + ++
Sbjct: 382 DEITLS------GALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALA 435
Query: 476 ESEHIYSMLE 485
E+ ++ M+E
Sbjct: 436 EASDLFDMME 445
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 166/355 (46%), Gaps = 36/355 (10%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S IS ++G ++ F M G + + +L C +C +G +
Sbjct: 146 VVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGAL-EEC-DMGVQV 203
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HGLV K G D +V+ G+ALL MYAK R+D + VF + K+ +W+AMI
Sbjct: 204 HGLVVKFGFD-CDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMI-------- 254
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
G V+ E LE F+EMQ GV S+ +
Sbjct: 255 -----------------------AGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRS 291
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA + L +G +H + LK F ++ V +D+Y++CG + A++V M K +L S+
Sbjct: 292 CAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSY 351
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+IIVG+A + +AL+ F + K G D ++ +GAL AC+ +G + + K
Sbjct: 352 NAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVK 411
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
+S I I+D+Y + L +A ++ + M + + V +++AAC G+
Sbjct: 412 SISMS-NICVANAILDMYGKCKALAEASDLFDMME-RRDAVSWNAIIAACEQNGN 464
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 151/338 (44%), Gaps = 39/338 (11%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W++ I+ ++ R E F M G + + +L CA + L LG +H
Sbjct: 248 VSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSA--LRLGKELH 305
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
K ++++VGTA LDMYAK GRM A V +M S ++NA+I GY R
Sbjct: 306 SHALKSAFG-SDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARS--- 361
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
RG+ +AL+ F+ + +G+ D +T+ LNAC
Sbjct: 362 --------------------------DRGF--QALKSFQLLLKTGLGFDEITLSGALNAC 393
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ G +H +K N+ V N ++D+Y +C + A +F M +R VSWN
Sbjct: 394 ASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWN 453
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+II NG E L +F SM +PD ++ L AC+ + G+ +I +I
Sbjct: 454 AIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGM---EIHTRI 510
Query: 346 YRVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMPMK 381
+ + + +VD+Y + G +E A + + K
Sbjct: 511 IKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQK 548
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 135/315 (42%), Gaps = 42/315 (13%)
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
T + C+ +L G H ++ F+ V N L+ +Y +C +++A +VF +M
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 277 HKRTLVSWNSIIVGFA--------------------------VNGFV--GE---ALEYFN 305
+ R +VS+NSII G+A ++GF+ GE +++ F
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170
Query: 306 SMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRA 365
M + G D S L AC + G++ ++ K + + ++ +Y++
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVK-FGFDCDVVTGSALLGMYAKC 229
Query: 366 GRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGV-DSNYVLL 424
RL+D+L+V +P K N V +++A C + L K + + GV S Y L
Sbjct: 230 KRLDDSLSVFSELPEK-NWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASL 288
Query: 425 ANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
AA+ A ++ + + ++ G S I +G+ + A +++ + S +
Sbjct: 289 FRSCAAL----SALRLGKELHSHALKSAFG-SDIIVGTATLDMYAKCGRMADAQKVLSSM 343
Query: 485 ---ELLSFDLKLCGY 496
L S++ + GY
Sbjct: 344 PKCSLQSYNAIIVGY 358
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 175/464 (37%), Positives = 251/464 (54%), Gaps = 40/464 (8%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W+++IS + + G EA +M G PN +T I++LSGCA + L G IH
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGA--LMHGKEIH 388
Query: 106 GLVCKLGLD-RNN-----VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
K +D R N MV L+DMYAK ++D+A +FD++ K
Sbjct: 389 CYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKE----------- 437
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM--QISGVEPDYVT 217
RD ++WT ++ G+ + G +ALE EM + P+ T
Sbjct: 438 ------------------RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479
Query: 218 IISVLNACANVGTLGIGLWIHRYVLK-QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
I L ACA++ L IG IH Y L+ Q + V N LID+Y++CG I AR VF M
Sbjct: 480 ISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNM 539
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
++ V+W S++ G+ ++G+ EAL F M++ GFK DGV+ L ACSH+G+I+ G+
Sbjct: 540 MEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGM 599
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
YF+ MK + VSP EHY C+VDL RAGRL AL ++E MPM+P VV +LL+ CR
Sbjct: 600 EYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRI 659
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
G + L E K + +L D +Y LL+NMYA G+W +IR M+ +GI+K+PG S
Sbjct: 660 HGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCS 719
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+E G F GD++H ++ IY +L +K GYVPET
Sbjct: 720 WVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPET 763
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 201/369 (54%), Gaps = 34/369 (9%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W S I + + G+ A F++MT G P+ IT + +L CA ++ L G
Sbjct: 194 VSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSL--GKQF 251
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + +N + VG L+DMYAKFG MD A VF M VK +WNAM+ GY + G
Sbjct: 252 HGFAVTSEMIQN-MFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGR 310
Query: 165 IESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
E AVR+F++M D ++W+A ++G+ +RG EAL R+M SG++P+ VT+IS
Sbjct: 311 FEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 221 VLNACANVGTLGIGLWIHRYVLK--QDFKDNVK-----VCNTLIDLYSRCGCIEFARQVF 273
VL+ CA+VG L G IH Y +K D + N V N LID+Y++C ++ AR +F
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMF 430
Query: 274 QRM--HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEG--FKPDGVSFTGALTACSHA 329
+ +R +V+W +I G++ +G +ALE + M +E +P+ + + AL AC+
Sbjct: 431 DSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA-- 488
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYG-------CIVDLYSRAGRLEDALNVVENMPMKP 382
L I K+I+ + R + C++D+Y++ G + DA V +NM M+
Sbjct: 489 -----SLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNM-MEK 542
Query: 383 NEVVLGSLL 391
NEV SL+
Sbjct: 543 NEVTWTSLM 551
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 182/404 (45%), Gaps = 84/404 (20%)
Query: 47 QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPS-QCLFLGAMIH 105
W S I + +GR + F M P++ TF + C + S +C G H
Sbjct: 94 HWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRC---GDSSH 150
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
L G +NV VG AL+ MY+ R G +
Sbjct: 151 ALSRVTGF-MSNVFVGNALVAMYS-------------------------------RCGSL 178
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNA 224
A ++FDEMPV D +SW +++ + K G + ALE F +M G PD +T+++VL
Sbjct: 179 SDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPP 238
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CA+VGT +G H + + + N+ V N L+D+Y++ G ++ A VF M + +VSW
Sbjct: 239 CASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSW 298
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N+++ G++ G +A+ F MQ+E K D V+++ A++ G + GL Y
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAIS-----GYAQRGLGY------ 347
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDII 401
+AL V M +KPNEV L S+L+ C + G ++
Sbjct: 348 -------------------------EALGVCRQMLSSGIKPNEVTLISVLSGCASVGALM 382
Query: 402 LAERL----MKYLVDL--DPGVDSNYVL--LANMYAAVGKWDGA 437
+ + +KY +DL + D N V+ L +MYA K D A
Sbjct: 383 HGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIA 426
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 108/233 (46%), Gaps = 10/233 (4%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDA--ISWTALLNGFVKRGYFEEALECFREMQISGVE 212
+I Y+ G + AV + P DA W +L+ + G + L F M
Sbjct: 65 LISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWT 124
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
PD T V AC + ++ G H F NV V N L+ +YSRCG + AR+V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKV 184
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE-GFKPDGVSFTGALTACSHAGL 331
F M +VSWNSII +A G ALE F+ M E GF+PD ++ L C+ G
Sbjct: 185 FDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGT 244
Query: 332 IEDGLRYFDIMKKIYRVSPRIEHY---GCIVDLYSRAGRLEDALNVVENMPMK 381
G ++ S I++ C+VD+Y++ G +++A V NMP+K
Sbjct: 245 RSLGKQFHGFAV----TSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVK 293
>gi|242083462|ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
gi|241942849|gb|EES15994.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
Length = 557
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 167/481 (34%), Positives = 261/481 (54%), Gaps = 40/481 (8%)
Query: 48 WTSSISRHCR----SGRIAEAALEFTRMTLHG--TNPNHITFITLLSGCADFPSQCLFLG 101
WT++I+ + R S AE AL R+ L PN T +++ C+ + + G
Sbjct: 79 WTATIAAYARHASSSLSAAEGALALFRLMLRRGVPRPNAFTASSVVRCCSAL--RAVREG 136
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+HG + GL R + VG AL+DMY GR+ A VFD M + N M+ Y+R
Sbjct: 137 IQVHGFLFSAGLGRAS-HVGAALVDMYGSLGRVADARRVFDEMPSTNVVLGNTMVACYVR 195
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRG-------YFEE---------------- 198
GD+E+ +FD M RD ISW L+ G++++G FEE
Sbjct: 196 AGDVEAGRDVFDRMAERDPISWNTLMMGYLRQGEAGVARDLFEEMPDRNVNSWNMVIAAC 255
Query: 199 --------ALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 250
A+E F M+++ +PD T+ +++ACA +G+L I +H + K + N
Sbjct: 256 SQEGLWADAVEVFNRMRLARFQPDPATMAVLMSACAQLGSLSIASQVHGILRKGCVEMNF 315
Query: 251 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 310
V N+LID+Y++CG + A +F + VS+N +I A +G +AL+ F+ M +E
Sbjct: 316 HVLNSLIDMYAKCGSVSQAHLLFVETRLKDTVSYNVMICALAQHGHGRDALQIFDEMSEE 375
Query: 311 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 370
G +PD V+F G L+AC+HAGL+ DG YF+ M+ Y + +HY C+VDLY RAG +E+
Sbjct: 376 GLQPDAVTFLGVLSACAHAGLVHDGKFYFESMRTNYAIEQSPDHYACMVDLYGRAGLIEE 435
Query: 371 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 430
A + MP+KP+ V G+L+ ACR ++ + + + L+ ++PG YVLLAN A
Sbjct: 436 AYQLARAMPVKPHAGVWGALINACRKHCNVEVGKVAARELIAIEPGNPGTYVLLANTLAR 495
Query: 431 VGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFD 490
+WD + ++M+G+GI+K G S +E+ +HEF+ G+ SH S+ IY +LE L
Sbjct: 496 GQQWDFVETVWQSMRGKGIEKTAGCSWLEVDRVVHEFLMGESSHPNSDEIYCILEHLYLQ 555
Query: 491 L 491
L
Sbjct: 556 L 556
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/457 (35%), Positives = 256/457 (56%), Gaps = 34/457 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
+ W+ I+R+ +S R EA F RM PN+ TF ++L CA S L LG IH
Sbjct: 304 IPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACA--SSVSLDLGKQIH 361
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
V K GL+ N F NA++D Y + G+I
Sbjct: 362 SCVLKFGLNSN--------------------------------VFVSNAIMDVYAKCGEI 389
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E+++++F+E+P R+ ++W ++ G+V+ G E A+ F M ++P VT SVL A
Sbjct: 390 ENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRAS 449
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ L GL IH +K + + V N+LID+Y++CG I AR F +M+KR VSWN
Sbjct: 450 ASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWN 509
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
++I G++++G EAL F+ MQ KP+ ++F G L+ACS+AGL+ G +F+ M K
Sbjct: 510 AMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKD 569
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y + P IEHY C+V L R GR ++A+ ++ + +P+ +V +LL AC + L
Sbjct: 570 YDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRV 629
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+++++++P D+ +VLL+NMYA G+WD +R+ M+ + ++K+PGLS +E +H
Sbjct: 630 CAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVH 689
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVA 502
F GD SH + + I +MLE L+ + GYVP+ A
Sbjct: 690 YFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNA 726
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 195/433 (45%), Gaps = 75/433 (17%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT ++ + + E+ F +M + G PN+ T L C + +G +H
Sbjct: 203 VSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEA--FNVGKSVH 260
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G K G +++ VG ALL++YAK G+I
Sbjct: 261 GCALK-GCYDHDLFVGIALLELYAK-------------------------------SGEI 288
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
A R+F+EMP D I W+ ++ + + +EAL+ F M+ + V P+ T SVL AC
Sbjct: 289 IDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQAC 348
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A+ +L +G IH VLK NV V N ++D+Y++CG IE + ++F+ + R V+WN
Sbjct: 349 ASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWN 408
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI-MKK 344
+IIVG+ G A+ F M + +P V+++ L A + +E GL+ + +K
Sbjct: 409 TIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKT 468
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDA--------------------------------- 371
+Y + ++D+Y++ GR+ DA
Sbjct: 469 MYNKDTVVA--NSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALN 526
Query: 372 -LNVVENMPMKPNEVVLGSLLAACRTKGDIILAE---RLMKYLVDLDPGVDSNYVLLANM 427
+++++ KPN++ +L+AC G + + M D+ P ++ +Y + +
Sbjct: 527 LFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIE-HYTCMVWL 585
Query: 428 YAAVGKWDGAGKI 440
+G++D A K+
Sbjct: 586 LGRLGRFDEAMKL 598
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 159/305 (52%), Gaps = 12/305 (3%)
Query: 117 NVMVGTALLDMYAKFGRMDLATV-------VFDAMRVKSSFTWNAMIDGYMRRGDIESAV 169
N V T LL + MDLA + V+ +F A+ID Y RG+++ A
Sbjct: 135 NPFVFTTLLKLLVS---MDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVAR 191
Query: 170 RMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVG 229
+FD++ +D +SWT ++ + + ++EE+L+ F +M+I G +P+ TI L +C +
Sbjct: 192 HVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLE 251
Query: 230 TLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIV 289
+G +H LK + ++ V L++LY++ G I A+++F+ M K L+ W+ +I
Sbjct: 252 AFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIA 311
Query: 290 GFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVS 349
+A + EAL+ F M++ P+ +F L AC+ + ++ G + + K + ++
Sbjct: 312 RYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLK-FGLN 370
Query: 350 PRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKY 409
+ I+D+Y++ G +E+++ + E +P + N+V +++ GD A L +
Sbjct: 371 SNVFVSNAIMDVYAKCGEIENSMKLFEELPDR-NDVTWNTIIVGYVQLGDGERAMNLFTH 429
Query: 410 LVDLD 414
+++ D
Sbjct: 430 MLEHD 434
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 153/346 (44%), Gaps = 60/346 (17%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F N +++ Y++ ++ A ++FDEMP + IS+ L G+ + F +AL +
Sbjct: 71 FAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKE 130
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G E + ++L ++ + +H V K + V LID YS G ++ A
Sbjct: 131 GHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVA 190
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
R VF + + +VSW ++ +A N F E+L+ FN M+ G+KP+ + +GAL +C
Sbjct: 191 RHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCL-- 248
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGC----------IVDLYSRAGRLEDALNVVENMP 379
GL F++ K ++ + + GC +++LY+++G + DA + E MP
Sbjct: 249 -----GLEAFNVGKSVHGCALK----GCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMP 299
Query: 380 ----------------------------------MKPNEVVLGSLLAACRTKGDIILAER 405
+ PN S+L AC + + L ++
Sbjct: 300 KTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQ 359
Query: 406 LMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRG 448
+ ++ G++SN + + ++YA G+ + + K+ + R
Sbjct: 360 IHSCVLKF--GLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRN 403
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/351 (40%), Positives = 229/351 (65%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
F + ++D Y++ G+++SA ++F+++P D ++WT +++G V+ G E+AL + +M+++
Sbjct: 536 FVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLA 595
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
GV+PD T +++ AC+ + L G IH ++K + + V +L+D+Y++CG IE A
Sbjct: 596 GVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDA 655
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
+F+RM+ R++ WN++IVG A +G EAL +FN M+ G PD V+F G L+ACSH+
Sbjct: 656 YGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHS 715
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGS 389
GL D + FD M+K Y V P IEHY C+VD SRAG +++A VV +MP + + + +
Sbjct: 716 GLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRT 775
Query: 390 LLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGI 449
LL ACR +GD ER+ + L +DP + YVLL+N+YAA +W+ A R MK +
Sbjct: 776 LLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNV 835
Query: 450 QKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+K+PG S I++ + +H F+AGDRSH E++ IY+ +E + +K GYVP+T
Sbjct: 836 KKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDT 886
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 164/359 (45%), Gaps = 49/359 (13%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W ++S + ++G EA F M + +T+I +LS A L LG IHG
Sbjct: 265 WNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNH--LELGKQIHGA 322
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
V + G D+ V A N+ I+ Y++ G +
Sbjct: 323 VVRFGWDQ---FVSVA-----------------------------NSAINMYVKAGSVNY 350
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A RMF +M D ISW +++G + G E +L F ++ SG+ PD TI SVL AC++
Sbjct: 351 ARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS 410
Query: 228 V-GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNS 286
+ + +G +H LK + V LID+YS+ G +E A +F L SWN+
Sbjct: 411 LEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNA 470
Query: 287 IIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIY 346
++ GF V+ EAL F+ M + G K D ++F A A ++ G K+I+
Sbjct: 471 MMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQG-------KQIH 523
Query: 347 RVSPRIE-HYGC-----IVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
V ++ HY I+D+Y + G ++ A V +P P++V ++++ C G+
Sbjct: 524 AVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENGE 581
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 159/329 (48%), Gaps = 61/329 (18%)
Query: 97 CLFLGA-----MIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFT 151
CL G+ + G K+GL + +V V AL+++YAKF R+ A V+FD M V+
Sbjct: 132 CLLYGSPSASEALQGYAVKIGL-QWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVL 190
Query: 152 WNAMIDGYMRRGDIESAVRMF----------DEMPVR----------------------- 178
WN M+ Y+ G + + +F D + VR
Sbjct: 191 WNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYA 250
Query: 179 ----------DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV 228
D W L+ +++ G EA++CFR+M S V D +T I +L+ A++
Sbjct: 251 TKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASL 310
Query: 229 GTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
L +G IH V++ + V V N+ I++Y + G + +AR++F +M + L+SWN++I
Sbjct: 311 NHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVI 370
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRV 348
G A +G +L F + + G PD + T L ACS +E+ + + ++++
Sbjct: 371 SGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEES---YCVGRQVHTC 424
Query: 349 SPR----IEHY--GCIVDLYSRAGRLEDA 371
+ + ++ + ++D+YS+ G++E+A
Sbjct: 425 ALKAGIVLDSFVSTALIDVYSKGGKMEEA 453
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 150/336 (44%), Gaps = 40/336 (11%)
Query: 46 VQWTSSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSGCADFP-SQCLFLGAM 103
+ W + IS RSG + E +L F + G P+ T ++L C+ S C+ G
Sbjct: 364 ISWNTVISGCARSG-LEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCV--GRQ 420
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+H K G+ V SF A+ID Y + G
Sbjct: 421 VHTCALKAGI--------------------------------VLDSFVSTALIDVYSKGG 448
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+E A +F D SW A+++GF + EAL F M G + D +T +
Sbjct: 449 KMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAK 508
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
A + L G IH V+K F ++ V + ++D+Y +CG ++ AR+VF ++ V+
Sbjct: 509 AAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVA 568
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDIM 342
W ++I G NG +AL ++ M+ G +PD +F + ACS +E G + + +IM
Sbjct: 569 WTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIM 628
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
K P + +VD+Y++ G +EDA + M
Sbjct: 629 KLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRM 662
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 8/191 (4%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ IS +G +A + +M L G P+ TF TL+ C+ + L G IH
Sbjct: 567 VAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTA--LEQGKQIH 624
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
+ KL + V T+L+DMYAK G ++ A +F M +S WNAMI G + G+
Sbjct: 625 ANIMKLNCAFDP-FVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNA 683
Query: 166 ESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIIS 220
E A+ F+EM R D +++ +L+ G +A + F MQ + GVEP+
Sbjct: 684 EEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSC 743
Query: 221 VLNACANVGTL 231
+++A + G +
Sbjct: 744 LVDALSRAGHI 754
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 8/195 (4%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPV--RDAISWTALLNGFVKRGYFE------EALE 201
+ N +I Y + G + SA ++FD P RD +++ A+L + G EA
Sbjct: 49 YVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFH 108
Query: 202 CFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYS 261
FR ++ S + T+ + C G+ + Y +K + +V V L+++Y+
Sbjct: 109 IFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYA 168
Query: 262 RCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTG 321
+ I AR +F RM R +V WN ++ + G E L F++ + G +PD VS
Sbjct: 169 KFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRT 228
Query: 322 ALTACSHAGLIEDGL 336
L + E L
Sbjct: 229 ILMGVGKKTVFEREL 243
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 264/453 (58%), Gaps = 7/453 (1%)
Query: 43 NPTV-QWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
+PT+ W I + S + F +M HG P+++T+ L+ A Q G
Sbjct: 76 SPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSKQKS--G 133
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + K G + + + +L+ MYA G + A VF++M+ K+ +WN+M+DGY +
Sbjct: 134 VSVHAQIIKTGHESDR-FIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAK 192
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++ A ++F+ M RD SW++ ++G+VK G + EA+ F +M+ G + + VT++SV
Sbjct: 193 CGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT- 280
L+ACA++G L G +H+Y++ + + +L+D+Y++CG IE A VF+ + K
Sbjct: 253 LSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQT 312
Query: 281 -LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
+ WN++I G A +G V E+L+ F MQ G + D +++ L AC+H GL+++ +F
Sbjct: 313 DVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNFF 372
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
+ + K ++P EHY C+VD+ +RAG+L A + +P++P +LG++ + C +
Sbjct: 373 ESLVK-RGMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLGAIFSGCINHRN 431
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
LAE + + L++LDP D Y+ L+N+YA V +WD + +R M+ RG++K PG S +E
Sbjct: 432 FDLAETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRGVKKSPGFSFVE 491
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
I H F+A D++H +S+ YSML + +K
Sbjct: 492 ISEIHHRFIAHDKTHPDSDETYSMLHFVVCQMK 524
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 166/357 (46%), Gaps = 22/357 (6%)
Query: 82 TFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTAL-LDMYAKFGRMDLATVV 140
T ++LL C + + +H + GL + L + G +D + V
Sbjct: 16 TLLSLLDKC-----KSMLELKKLHAIGISYGLSHEYSFIFKILSFSALSNSGDIDYSYRV 70
Query: 141 FDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEM----PVRDAISWTALLNGFVKRGYF 196
F + + F+WN +I GY + ++ +F +M D +++ L+ +
Sbjct: 71 FSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSKQ 130
Query: 197 EEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTL 256
+ + ++ +G E D S+++ A+ G + +W H+ V + N+ N++
Sbjct: 131 KSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNI---MWAHK-VFESMQGKNLVSWNSM 186
Query: 257 IDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDG 316
+D Y++CG + A++VF+ M +R + SW+S I G+ G EA+ F M+ G K +
Sbjct: 187 LDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANE 246
Query: 317 VSFTGALTACSHAGLIEDG-LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
V+ L+AC+H G ++ G + + I+ + ++ ++ +VD+Y++ G +E+AL V
Sbjct: 247 VTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQ--TSLVDMYAKCGAIEEALFVF 304
Query: 376 ENMPMKPNEV-VLGSLLAACRTKGDIILAERLMKYLVDLD-PGVDSNYVLLANMYAA 430
+ +V + +++ T G L E +K ++ G+ S+ + + AA
Sbjct: 305 RGISKSQTDVFIWNAMIGGLATHG---LVEESLKLFKEMQMAGIRSDEITYLCLLAA 358
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 108/236 (45%), Gaps = 14/236 (5%)
Query: 217 TIISVLNACANVGTL----GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
T++S+L+ C ++ L IG+ Y L ++ K+ + S G I+++ +V
Sbjct: 16 TLLSLLDKCKSMLELKKLHAIGI---SYGLSHEYSFIFKILS--FSALSNSGDIDYSYRV 70
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F ++ T+ SWN II G++ + +L F M + G PD +++ + A +
Sbjct: 71 FSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSKQ 130
Query: 333 EDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
+ G+ + K S R ++ +Y+ G + A V E+M K N V S+L
Sbjct: 131 KSGVSVHAQIIKTGHESDRFIQ-NSLIHMYASCGNIMWAHKVFESMQGK-NLVSWNSMLD 188
Query: 393 ACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRG 448
G++ +A+++ + + + D S+++ + Y G++ A + M+ G
Sbjct: 189 GYAKCGEMAMAQKVFESMQERDVRSWSSFI---DGYVKAGEYREAMAVFEKMRAVG 241
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 242/441 (54%), Gaps = 35/441 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I+ + R G +A F +M + +T + +L CA + + +G++
Sbjct: 73 VVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACAR--TGAMKVGSLC 130
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H LV G + N +G++L+ MYAK G
Sbjct: 131 HALVVLNGFEIN-CYIGSSLVSMYAKCGM------------------------------- 158
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A R+F+ MP R+ + WT+++ G + G F+EA++ FR+MQI+GV+ D TI +V+++
Sbjct: 159 VEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSS 218
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C +G L +G ++H Y + V N+LID+YS+CG + A Q+F + KR + +W
Sbjct: 219 CGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTW 278
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
+I+GFA+NG EAL+ F M+ E P+ V F G LTACSH GL+E G +F M
Sbjct: 279 TVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMS 338
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
K+Y + PRIEHYGC+VDL RA L +A +++MP+ P+ VV SLL ACR G + LA
Sbjct: 339 KVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLA 398
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E + + L+P +VLL+N+YA +W +R M KKPG S IE+
Sbjct: 399 EYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNVRTGMGNSRTSKKPGCSFIEVDGC 458
Query: 464 IHEFMAGDRSHIESEHIYSML 484
IHEF AGD SH E+E I + L
Sbjct: 459 IHEFFAGDESHFETEAICNTL 479
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 126/248 (50%), Gaps = 8/248 (3%)
Query: 141 FDAMRVK-----SSFTWNAMIDGYMRRGDIESAVRMFDEMP--VRDAISWTALLNGFVKR 193
F A+ +K SF NA+I+ Y SA + D P D +SW ++ G+++
Sbjct: 27 FHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVSWNTIIAGYIRG 86
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
G +AL+ F +M V D VT+++VL ACA G + +G H V+ F+ N +
Sbjct: 87 GMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIG 146
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
++L+ +Y++CG +E AR+VF RM +R +V W S+I G +G EA++ F MQ G K
Sbjct: 147 SSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVK 206
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
D + +++C G ++ G RY + + + ++D+YS+ G + A
Sbjct: 207 ADDATIATVVSSCGQMGALDLG-RYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQ 265
Query: 374 VVENMPMK 381
+ + +
Sbjct: 266 IFHGLTKR 273
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/455 (36%), Positives = 256/455 (56%), Gaps = 34/455 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
++ WT I+ ++G EA F M L G + TF ++L+ C + L G I
Sbjct: 235 SISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLA--LGEGKQI 292
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V + ++NV VG+AL+DMY+ + +S
Sbjct: 293 HAYVIRTD-HKDNVFVGSALVDMYS---------------KCRS---------------- 320
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+SA +F MP ++ ISWTA+L G+ + G+ EEA++ F EMQ +GVEPD T+ SV+++
Sbjct: 321 IKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISS 380
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
CAN+ +L G H L + V N LI LY +CG E + ++F M+ R VSW
Sbjct: 381 CANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSW 440
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+++ G+A G E + F M G KPDGV+F G L+ACS AGL+E GL+YF+ M K
Sbjct: 441 TALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIK 500
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+ + P ++H CI+DL RAGRLE+A N + NMP P+ V +LL++CR GD+ + +
Sbjct: 501 EHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGK 560
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
L+ L+P ++YVLL+++YA+ GKWD ++RR M+ + ++K+PG S I+ +
Sbjct: 561 WAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKV 620
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
H F A D+S IY+ LE L++ + GYVP+
Sbjct: 621 HVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPD 655
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 205/369 (55%), Gaps = 10/369 (2%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGT-NPNHITFITLLSGCADFPSQCLFLGAMI 104
V W +IS + G ++A + M N N ITF T+L C+ F +C+ LG I
Sbjct: 103 VSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKF--RCVDLGRQI 160
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
+G + K G ++V VG+ L+DMY K G + A FD M ++ N MI G MR G
Sbjct: 161 NGQILKFGFG-SDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGM 219
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
IE + R+F + RD+ISWT ++ G ++ G EAL+ FREM+++G D T SVL A
Sbjct: 220 IEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTA 279
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C ++ LG G IH YV++ D KDNV V + L+D+YS+C I+ A VF+RM ++ ++SW
Sbjct: 280 CGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISW 339
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+++VG+ NGF EA++ F MQ+ G +PD + +++C++ +E+G + F
Sbjct: 340 TAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQ-FHCRAL 398
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD----I 400
+ + I ++ LY + G E++ + M ++ +EV +LLA G I
Sbjct: 399 VSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIR-DEVSWTALLAGYAQFGKANETI 457
Query: 401 ILAERLMKY 409
L ER++ +
Sbjct: 458 GLFERMLAH 466
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 151/337 (44%), Gaps = 48/337 (14%)
Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFD 142
+ +LL C + SQ +H L+ K + + + L+ Y K G + A VFD
Sbjct: 8 YASLLKLCCE--SQNQTQAKKLHCLILKT-IKQPETFLSNNLITAYYKLGNLAYAHHVFD 64
Query: 143 AMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALEC 202
+ + F+WN ++ Y + G + ++F+ MP RD +SW ++G+ G +A+
Sbjct: 65 HIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRV 124
Query: 203 FREM-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF--------------- 246
++ M + + + + +T ++L C+ + +G I+ +LK F
Sbjct: 125 YKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYT 184
Query: 247 ----------------KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVG 290
+ NV +CNT+I RCG IE ++++F + +R +SW +I G
Sbjct: 185 KLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITG 244
Query: 291 FAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSP 350
NG EAL+ F M+ GF D +F LTAC + +G K+I+
Sbjct: 245 LMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEG-------KQIHAYVI 297
Query: 351 RIEHY------GCIVDLYSRAGRLEDALNVVENMPMK 381
R +H +VD+YS+ ++ A V + MP K
Sbjct: 298 RTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQK 334
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 30/198 (15%)
Query: 38 SKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQC 97
++ + V WT+ ++ + + G+ E F RM HG P+ +TFI +LS C+
Sbjct: 430 TEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSR----- 484
Query: 98 LFLGAMIHGLVCKLGLDRNNVMVG-----------TALLDMYAKFGRMDLATVVFDAMRV 146
GLV K GL M+ T ++D+ + GR++ A + M
Sbjct: 485 -------AGLVEK-GLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPC 536
Query: 147 KSSFT-WNAMIDGYMRRGDIESAVRMFDEMPV---RDAISWTALLNGFVKRGYFEEALEC 202
W ++ GD+E D + ++ S+ L + + +G +++ +
Sbjct: 537 HPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQL 596
Query: 203 FREMQISGV--EPDYVTI 218
R M+ V EP Y I
Sbjct: 597 RRGMRDKRVRKEPGYSWI 614
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/475 (34%), Positives = 260/475 (54%), Gaps = 46/475 (9%)
Query: 59 GRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLG-LDRNN 117
GR+A+A F R+ P+ +++ TLLS C F G + +
Sbjct: 112 GRLADARHLFDRIP----TPDAVSYNTLLS--------CHFASGDADGARRLFASMPVRD 159
Query: 118 VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG------------------- 158
V+ ++ +K G ++ A VF AM V++S +WNAM+ G
Sbjct: 160 VVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPE 219
Query: 159 -------------YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
YM G++ A+ F+ MPVR+ +SW A++ G+VK + ++AL FR
Sbjct: 220 KGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRT 279
Query: 206 M-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
M + + V+P+ T+ SVL C+N+ LG G IH++ +K N+ V +L+ +Y +CG
Sbjct: 280 MVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCG 339
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
+ A ++F MH R +V+WN++I G+A +G EA+ F M+ EG +P+ ++F LT
Sbjct: 340 DLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLT 399
Query: 325 ACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNE 384
AC H GL + G+R F+ M+++Y + PR++HY C+VDL RAG+LE A++++ +MP +P+
Sbjct: 400 ACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHP 459
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
G+LLAACR ++ AE L++ DP YV LAN+YA +WD ++RR M
Sbjct: 460 SAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWM 519
Query: 445 KGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
K + K PG S IEI +HEF + DR H + I+ L L+ +K GYVP+
Sbjct: 520 KDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPD 574
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 129/302 (42%), Gaps = 26/302 (8%)
Query: 156 IDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR-GYFEEALECFREMQISGVEPD 214
+ +RRGD+ A F P + ++ LL G+ + G +A F + PD
Sbjct: 73 VAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPT----PD 128
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
V+ ++L +C G R +D V NT++ S+ G +E A+ VF
Sbjct: 129 AVSYNTLL-SCHFASGDADG--ARRLFASMPVRDVVS-WNTMVSGLSKSGAVEEAKAVFL 184
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
M R VSWN+++ GFA + + A E+F + ++G D V +T ++ G +
Sbjct: 185 AMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVK 241
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM----PMKPNEVVLGSL 390
+ YF+ M VS + +V Y + +DAL + M ++PN L S+
Sbjct: 242 AIEYFEAMPVRNLVS-----WNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSV 296
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGR 447
L C + +++ ++ + L + N + L +MY G A K+ M R
Sbjct: 297 LLGCSNLSALGFGKQIHQWCMKLP--LSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTR 354
Query: 448 GI 449
+
Sbjct: 355 DV 356
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/395 (39%), Positives = 238/395 (60%), Gaps = 7/395 (1%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCA----DFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTA 123
F +M + +P+ TF LL G + D P + IHG V KLG ++ V A
Sbjct: 83 FNQMRRNCVDPDGFTFTFLLKGRSRMRIDLP--LIVASDEIHGAVLKLGFC-FHLFVMNA 139
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISW 183
L+ +YA G A VF+ M +W+ ++ ++R G++E A ++F EMP RD +SW
Sbjct: 140 LIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFYEMPERDVVSW 199
Query: 184 TALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLK 243
T +++G+ + EALE FREM+ GV PD V ++SV++AC ++G L G +HRY+ +
Sbjct: 200 TVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISACTSLGDLETGFEVHRYIDE 259
Query: 244 QDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEY 303
F V +CN LID+Y++CGC++ A QVF M +++L++WNS+I A +G +A
Sbjct: 260 NGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRV 319
Query: 304 FNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYS 363
F M G +PDGV+F LTA +H G ++DG F+ M++ Y V +EHYGC+VD+
Sbjct: 320 FTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLG 379
Query: 364 RAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL 423
RAGRLE+A ++ +M M N+VV G+LLAACR GD+ + ER++K L++L P Y+L
Sbjct: 380 RAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEMGERVLKKLIELKPDEGGYYIL 439
Query: 424 LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
L ++Y A G+ A ++RR M G +K G S +
Sbjct: 440 LRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 474
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 103/255 (40%), Gaps = 69/255 (27%)
Query: 264 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGAL 323
GC+ +A ++F ++H+ +N++I G++ + ++++ FN M++ PDG +FT L
Sbjct: 43 GCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLL 102
Query: 324 TACS---------------HAGLIEDGLRY----FDIMKKIY--RVSPRIEH-------- 354
S H +++ G + + + +Y R P H
Sbjct: 103 KGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVG 162
Query: 355 -----YGCIVDLYSRAGRLEDALNVVENMP------------------------------ 379
+ +V + RAG LE A V MP
Sbjct: 163 ADVVSWSGLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREM 222
Query: 380 ----MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPG-VDSNYVLLANMYAAVGKW 434
++P+EV + S+++AC + GD+ + +Y+ + G + S L +MYA G
Sbjct: 223 RDVGVRPDEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCM 282
Query: 435 DGAGKIRRTMKGRGI 449
D A ++ M+ + +
Sbjct: 283 DLAWQVFNNMERKSL 297
>gi|297607983|ref|NP_001061009.2| Os08g0153600 [Oryza sativa Japonica Group]
gi|255678154|dbj|BAF22923.2| Os08g0153600 [Oryza sativa Japonica Group]
Length = 551
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/475 (34%), Positives = 260/475 (54%), Gaps = 46/475 (9%)
Query: 59 GRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLG-LDRNN 117
GR+A+A F R+ P+ +++ TLLS C F G + +
Sbjct: 63 GRLADARHLFDRIP----TPDAVSYNTLLS--------CHFASGDADGARRLFASMPVRD 110
Query: 118 VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG------------------- 158
V+ ++ +K G ++ A VF AM V++S +WNAM+ G
Sbjct: 111 VVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPE 170
Query: 159 -------------YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
YM G++ A+ F+ MPVR+ +SW A++ G+VK + ++AL FR
Sbjct: 171 KGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRT 230
Query: 206 M-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
M + + V+P+ T+ SVL C+N+ LG G IH++ +K N+ V +L+ +Y +CG
Sbjct: 231 MVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCG 290
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
+ A ++F MH R +V+WN++I G+A +G EA+ F M+ EG +P+ ++F LT
Sbjct: 291 DLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLT 350
Query: 325 ACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNE 384
AC H GL + G+R F+ M+++Y + PR++HY C+VDL RAG+LE A++++ +MP +P+
Sbjct: 351 ACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHP 410
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
G+LLAACR ++ AE L++ DP YV LAN+YA +WD ++RR M
Sbjct: 411 SAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWM 470
Query: 445 KGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
K + K PG S IEI +HEF + DR H + I+ L L+ +K GYVP+
Sbjct: 471 KDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPD 525
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 129/302 (42%), Gaps = 26/302 (8%)
Query: 156 IDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR-GYFEEALECFREMQISGVEPD 214
+ +RRGD+ A F P + ++ LL G+ + G +A F + PD
Sbjct: 24 VAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPT----PD 79
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
V+ ++L +C G R +D V NT++ S+ G +E A+ VF
Sbjct: 80 AVSYNTLL-SCHFASGDADG--ARRLFASMPVRDVVS-WNTMVSGLSKSGAVEEAKAVFL 135
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
M R VSWN+++ GFA + + A E+F + ++G D V +T ++ G +
Sbjct: 136 AMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVK 192
Query: 335 GLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM----PMKPNEVVLGSL 390
+ YF+ M VS + +V Y + +DAL + M ++PN L S+
Sbjct: 193 AIEYFEAMPVRNLVS-----WNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSV 247
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGR 447
L C + +++ ++ + L + N + L +MY G A K+ M R
Sbjct: 248 LLGCSNLSALGFGKQIHQWCMKLP--LSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTR 305
Query: 448 GI 449
+
Sbjct: 306 DV 307
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/445 (35%), Positives = 243/445 (54%), Gaps = 35/445 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W S + G +A + M P+ TFI L + C + + L G +IH
Sbjct: 828 VSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN--PETLTQGRLIH 885
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
LG D+ D+ + N I Y + D
Sbjct: 886 SHAIHLGTDQ-------------------DIEAI-------------NTFISMYSKSEDT 913
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
SA +FD M R +SWT +++G+ ++G +EAL F M SG +PD VT++S+++ C
Sbjct: 914 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 973
Query: 226 ANVGTLGIGLWIH-RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
G+L G WI R + +DNV +CN LID+YS+CG I AR +F ++T+V+W
Sbjct: 974 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 1033
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
++I G+A+NG EAL+ F+ M +KP+ ++F L AC+H+G +E G YF IMK+
Sbjct: 1034 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 1093
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y +SP ++HY C+VDL R G+LE+AL ++ NM KP+ + G+LL AC+ ++ +AE
Sbjct: 1094 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAE 1153
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
+ + L +L+P + + YV +AN+YAA G WDG +IR MK R I+K PG S I++
Sbjct: 1154 QAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN 1213
Query: 465 HEFMAGDRSHIESEHIYSMLELLSF 489
H F G+ H+E+E IY L LS
Sbjct: 1214 HSFTVGEHGHVENEVIYFTLNGLSL 1238
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 189/447 (42%), Gaps = 90/447 (20%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + +S C+SG +A F M L+ P+ +T +TL+ A F L AM H +
Sbjct: 727 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQS-ASFEKSLKLLEAM-HAV 784
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+LG+D V V + Y K G +D A +VF+A ID RGD
Sbjct: 785 GIRLGVD-VQVTVANTWISTYGKCGDLDSAKLVFEA------------ID----RGD--- 824
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
R +SW ++ + G +A + M +PD T I++ +C N
Sbjct: 825 ----------RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN 874
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
TL G IH + + +++ NT I +YS+ AR +F M RT VSW +
Sbjct: 875 PETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVM 934
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
I G+A G + EAL F++M K G KPD V+ ++ C G +E G ++ D
Sbjct: 935 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG-KWIDA------ 987
Query: 348 VSPRIEHYGC----------IVDLYSRAGRLEDALNVVENMP------------------ 379
R + YGC ++D+YS+ G + +A ++ +N P
Sbjct: 988 ---RADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNG 1044
Query: 380 ----------------MKPNEVVLGSLLAACRTKGDIILAER---LMKYLVDLDPGVDSN 420
KPN + ++L AC G + +MK + ++ PG+D +
Sbjct: 1045 IFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLD-H 1103
Query: 421 YVLLANMYAAVGKWDGAGKIRRTMKGR 447
Y + ++ GK + A ++ R M +
Sbjct: 1104 YSCMVDLLGRKGKLEEALELIRNMSAK 1130
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 39/298 (13%)
Query: 40 STVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLF 99
S+VN W I E+ L F M G PN+ TF + CA +
Sbjct: 621 SSVNA---WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAD--VG 675
Query: 100 LGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGY 159
M+H + K ++V VGTA +DM+ K +D A
Sbjct: 676 CCEMVHAHLIKSPF-WSDVFVGTATVDMFVKCNSVDYA---------------------- 712
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTII 219
++F+ MP RDA +W A+L+GF + G+ ++A FREM+++ + PD VT++
Sbjct: 713 ---------AKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVM 763
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK- 278
+++ + + +L + +H ++ V V NT I Y +CG ++ A+ VF+ + +
Sbjct: 764 TLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRG 823
Query: 279 -RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
RT+VSWNS+ ++V G +A + M +E FKPD +F +C + + G
Sbjct: 824 DRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQG 881
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 111/238 (46%), Gaps = 36/238 (15%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
T V WT IS + G + EA F M G P+ +T ++L+SGC F S L
Sbjct: 924 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGS--LET 981
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G I G R+NVM+ AL+DMY+K G + A +FD K+ TW MI GY
Sbjct: 982 GKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYA 1041
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
LNG F EAL+ F +M +P+++T ++
Sbjct: 1042 --------------------------LNGI-----FLEALKLFSKMIDLDYKPNHITFLA 1070
Query: 221 VLNACANVGTLGIGLWIHRYVLKQ--DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
VL ACA+ G+L G W + +++KQ + + + ++DL R G +E A ++ + M
Sbjct: 1071 VLQACAHSGSLEKG-WEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNM 1127
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 7/198 (3%)
Query: 182 SWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYV 241
+W + V R E+L FREM+ G EP+ T V ACA + +G +H ++
Sbjct: 625 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 684
Query: 242 LKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
+K F +V V +D++ +C +++A +VF+RM +R +WN+++ GF +G +A
Sbjct: 685 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 744
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI---YRVSPRIEHYGCI 358
F M+ PD V+ + + S E L+ + M + V ++
Sbjct: 745 SLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLGVDVQVTVANTW 800
Query: 359 VDLYSRAGRLEDALNVVE 376
+ Y + G L+ A V E
Sbjct: 801 ISTYGKCGDLDSAKLVFE 818
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 264/464 (56%), Gaps = 9/464 (1%)
Query: 41 TVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFL 100
V V WTS + G + L F M L+G N +T ++L CAD+ + L
Sbjct: 139 VVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY----IKL 194
Query: 101 GAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G +HG + + ++ NV V +AL++MYA + A +VFD+M + +WN M+ Y
Sbjct: 195 GREVHGFILRNEME-GNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYF 253
Query: 161 RRGDIESAVRMFDEMPVR----DAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYV 216
+ E + +F +M + SW A ++G ++ G E AL +MQ SG++P+ +
Sbjct: 254 LNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRI 313
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRM 276
TI+S L C N+ +L G IH YV + F ++V + L+ LY++CG +E +R VF M
Sbjct: 314 TIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTM 373
Query: 277 HKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL 336
++ +V+WN++I+ +++G GE+L FN M G +P+ V+F G L+ CSH+ L ++GL
Sbjct: 374 PRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGL 433
Query: 337 RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRT 396
F+ M + ++P +HY C+VD+ SRAGRLE+A + + MP++P G+LL ACR
Sbjct: 434 LVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRV 493
Query: 397 KGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLS 456
++ L L +++P NYVLL+N+ KW A +IR+ M+ +G+ K PG S
Sbjct: 494 YKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRS 553
Query: 457 SIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+++ + ++ F+ GD+S+ + + IY L+ + ++L GY P T
Sbjct: 554 WVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNT 597
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 181/409 (44%), Gaps = 73/409 (17%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WT IS H + G +A ++ + P+ +++ CA S L + IH
Sbjct: 45 WTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACA--ASGDLVVAKKIHDD 102
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ G +++ +++G AL+DM+ K ++ A VF
Sbjct: 103 AIQFGFNKD-LVLGNALIDMFGKCKFVNGARCVF-------------------------- 135
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
D+M V+D +SWT++ +V G + + FREM ++G+ + +T+ S+L ACA+
Sbjct: 136 -----DDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACAD 190
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
+ +G +H ++L+ + + NV V + L+++Y+ ++ AR VF M+ R +VSWN +
Sbjct: 191 Y--IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVM 248
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK---- 343
+ + +N L F+ M+KEG K + S+ A++ C G E L M+
Sbjct: 249 LTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGI 308
Query: 344 KIYRVSPRIEHYGC------------------------------IVDLYSRAGRLEDALN 373
K R++ GC +V LY++ G LE + +
Sbjct: 309 KPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRH 368
Query: 374 VVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
V MP K + V +++ A G E L+ + LD GV+ N V
Sbjct: 369 VFNTMPRK-DVVAWNTMIMANSMHGK--GGESLILFNKMLDSGVEPNSV 414
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%)
Query: 155 MIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPD 214
+I + GD++ A+ +FD++P D +WT L++G + G+ ++A++ + + V PD
Sbjct: 17 LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76
Query: 215 YVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ 274
++SV ACA G L + IH ++ F ++ + N LID++ +C + AR VF
Sbjct: 77 KFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFD 136
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
M + +VSW S+ + G + + F M G + + ++ + L AC+
Sbjct: 137 DMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA 189
>gi|357164322|ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Brachypodium distachyon]
Length = 593
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/451 (35%), Positives = 254/451 (56%), Gaps = 37/451 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V WT+ +S R GR AEA + +M + PN T +L C + G +
Sbjct: 179 VVSWTALVSAFVRGGRFAEALVLVGQMDV---VPNEGTLACVLVACGRLGAA--RAGKAV 233
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
HG + D ++VG A+LDMY K ++DLA
Sbjct: 234 HGWYLRRESDLK-LIVGNAVLDMYVKCEKLDLAR-------------------------- 266
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
R+FD + VRD ISWT +++G V+ +ALE F EMQ S V+PD V + +VL+A
Sbjct: 267 -----RVFDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSA 321
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C ++G L G W+H Y+ ++ + +V V +L+D+Y++CGC+E + +F++M + L SW
Sbjct: 322 CTSLGALESGRWVHEYIERKGIEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLKNLSSW 381
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I GFA++G EALE+F+ M G P+ VSF L AC H+GL+++GL+ F+ MK
Sbjct: 382 NALINGFALHGHGREALEHFDRMVASGLAPNEVSFIIVLGACCHSGLVQEGLQLFESMKN 441
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y++SP EHYG +VDL RAG + +A +V + MPM+P G+LL+AC+ + ++
Sbjct: 442 SYKLSPWEEHYGSVVDLLGRAGLIHEAYSVTKAMPMRPAVFTWGALLSACQAHRQVDFSQ 501
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++++++ +L+ Y LL+N+YA +W ++R M +G+QK+PG S IE+
Sbjct: 502 QILRHVHELESSESGVYALLSNIYAVNHRWADVKRVRGLMSEKGLQKEPGSSVIEVNGKT 561
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCG 495
EF+ G ++H + I +ML +L + L G
Sbjct: 562 SEFVVGQKNHKNVDEICAMLSILMEQIYLDG 592
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 129/233 (55%), Gaps = 12/233 (5%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE 212
NA++ Y G+ A R+FDEM RD +SWTAL++ FV+ G F EAL +M V
Sbjct: 152 NALVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAFVRGGRFAEALVLVGQMD---VV 208
Query: 213 PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQV 272
P+ T+ VL AC +G G +H + L+++ + V N ++D+Y +C ++ AR+V
Sbjct: 209 PNEGTLACVLVACGRLGAARAGKAVHGWYLRRESDLKLIVGNAVLDMYVKCEKLDLARRV 268
Query: 273 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLI 332
F R+ R ++SW +I G +ALE FN MQK KPD V + L+AC+ G +
Sbjct: 269 FDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSACTSLGAL 328
Query: 333 EDGLRYFDIMKKIYRVSPRIE---HYG-CIVDLYSRAGRLEDALNVVENMPMK 381
E G + +++ IE H G +VD+Y++ G LE +L++ MP+K
Sbjct: 329 ESGRWVHEYIER-----KGIEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLK 376
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 113/254 (44%), Gaps = 46/254 (18%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V + WT IS + ++A F M P+ + T+LS C + L G
Sbjct: 274 VRDVISWTIMISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSACTSLGA--LESG 331
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+H + + G++ + V VGT+L+DMYAK G ++ + +F M +K+ +WNA+I+G
Sbjct: 332 RWVHEYIERKGIEWD-VHVGTSLVDMYAKCGCLETSLSIFRKMPLKNLSSWNALING--- 387
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
F G+ EALE F M SG+ P+ V+ I V
Sbjct: 388 ----------------------------FALHGHGREALEHFDRMVASGLAPNEVSFIIV 419
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVC------NTLIDLYSRCGCIEFARQVFQR 275
L AC + G + GL L + K++ K+ +++DL R G I A V +
Sbjct: 420 LGACCHSGLVQEGLQ-----LFESMKNSYKLSPWEEHYGSVVDLLGRAGLIHEAYSVTKA 474
Query: 276 MHKRTLV-SWNSII 288
M R V +W +++
Sbjct: 475 MPMRPAVFTWGALL 488
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 122/321 (38%), Gaps = 69/321 (21%)
Query: 179 DAISWTALLNGFVKRGYFEEALECFREMQISGV----EPDYVTIISVLNACANVGTLGI- 233
A + AL++ G A F + +G PD T+ + L ACA +G G
Sbjct: 67 SAHPFNALISHLTLSGEPSSAFRTFAALLAAGRGEPRRPDGYTLPATLKACARLGAGGDD 126
Query: 234 -----GLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSII 288
G +H K F + V N L+ LY CG AR+VF M R +VSW +++
Sbjct: 127 GGLREGRQVHAVAEKGGFLGRLPVRNALVTLYGVCGECGDARRVFDEMASRDVVSWTALV 186
Query: 289 VGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-------LRYFDI 341
F G EAL M P+ + L AC G G LR
Sbjct: 187 SAFVRGGRFAEALVLVGQMD---VVPNEGTLACVLVACGRLGAARAGKAVHGWYLRRESD 243
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLE-------------------------------- 369
+K I ++D+Y + +L+
Sbjct: 244 LKLIVG--------NAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQCKLPSK 295
Query: 370 --DALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYL----VDLDPGVDSNYVL 423
+ N ++ +KP++VVL ++L+AC + G + + +Y+ ++ D V ++
Sbjct: 296 ALEVFNEMQKSRVKPDKVVLSTVLSACTSLGALESGRWVHEYIERKGIEWDVHVGTS--- 352
Query: 424 LANMYAAVGKWDGAGKIRRTM 444
L +MYA G + + I R M
Sbjct: 353 LVDMYAKCGCLETSLSIFRKM 373
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 242/441 (54%), Gaps = 35/441 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W + I+ + R G +A F +M + +T + +L CA + + +G++
Sbjct: 161 VVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACAR--TGAMKVGSLC 218
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H LV G + N +G++L+ MYAK G
Sbjct: 219 HALVVLNGFEIN-CYIGSSLVSMYAKCGM------------------------------- 246
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A R+F+ MP R+ + WT+++ G + G F+EA++ FR+MQI+GV+ D TI +V+++
Sbjct: 247 VEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSS 306
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C +G L +G ++H Y + V N+LID+YS+CG + A Q+F + KR + +W
Sbjct: 307 CGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTW 366
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEG-FKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
+I+GFA+NG EAL+ F M+ E P+ V F G LTACSH GL+E G +F M
Sbjct: 367 TVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMS 426
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
K+Y + PRIEHYGC+VDL RA L +A +++MP+ P+ VV SLL ACR G + LA
Sbjct: 427 KVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLA 486
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
E + + L+P +VLL+N+YA +W +R M KKPG S IE+
Sbjct: 487 EYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNVRTGMGNSRTSKKPGCSFIEVDGC 546
Query: 464 IHEFMAGDRSHIESEHIYSML 484
IHEF AGD SH E+E I + L
Sbjct: 547 IHEFFAGDESHFETEAICNTL 567
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 126/248 (50%), Gaps = 8/248 (3%)
Query: 141 FDAMRVK-----SSFTWNAMIDGYMRRGDIESAVRMFDEMP--VRDAISWTALLNGFVKR 193
F A+ +K SF NA+I+ Y SA + D P D +SW ++ G+++
Sbjct: 115 FHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVSWNTIIAGYIRG 174
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
G +AL+ F +M V D VT+++VL ACA G + +G H V+ F+ N +
Sbjct: 175 GMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIG 234
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
++L+ +Y++CG +E AR+VF RM +R +V W S+I G +G EA++ F MQ G K
Sbjct: 235 SSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVK 294
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
D + +++C G ++ G RY + + + ++D+YS+ G + A
Sbjct: 295 ADDATIATVVSSCGQMGALDLG-RYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQ 353
Query: 374 VVENMPMK 381
+ + +
Sbjct: 354 IFHGLTKR 361
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/486 (32%), Positives = 267/486 (54%), Gaps = 45/486 (9%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLL-SGCADFPSQCLFLGAMI 104
V W + + + +GR+ +A F RM + +I TL+ SG D + G M
Sbjct: 137 VSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVRSGSVDKARE--LFGRM- 193
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRR-- 162
+VM T ++D A+ G++D A V+FD+M ++ +WNAMI GY R
Sbjct: 194 ---------PERDVMAWTTMVDGVARSGKVDEARVLFDSMPERNVVSWNAMISGYTRNHR 244
Query: 163 -----------------------------GDIESAVRMFDEMPVRDAISWTALLNGFVKR 193
D++ A +FDEMP R+ ++WT ++NG++K
Sbjct: 245 IDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRARELFDEMPERNVVTWTTMMNGYLKG 304
Query: 194 GYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC 253
E AL F M ++G P+ VT + L+AC+++ L G +H+ + K F+ + V
Sbjct: 305 KQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEGKQVHQMICKTTFQFDAFVE 364
Query: 254 NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFK 313
+ L+++Y++CG I AR++F ++ L+SWN II +A +G EA+ + MQ+ G++
Sbjct: 365 SALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAILLYEKMQENGYR 424
Query: 314 PDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALN 373
P+ V++ L+ACSH+GL+++GL+ F+ M ++ R EHY C++DL SRAGRL+DA
Sbjct: 425 PNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKR 484
Query: 374 VVENMPMKP-NEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVG 432
++ + +KP + V +LL C G+ + + L+ +P Y LL+N+YA+ G
Sbjct: 485 LIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLLQAEPDNAGTYTLLSNIYASAG 544
Query: 433 KWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLK 492
KW A +IR M RG++K+PG S IE+ + +H F+A D+SH ES+ IY +L+ + ++
Sbjct: 545 KWKEAAEIRSEMNNRGLKKQPGCSWIEVANKVHVFVARDKSHSESDLIYGLLQNIHHMMR 604
Query: 493 LCGYVP 498
+ G VP
Sbjct: 605 IVGTVP 610
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 200/440 (45%), Gaps = 63/440 (14%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADF----PSQCLFLG 101
V WT+ +S + R G + +A F R N +T+ LLSG A ++ LF
Sbjct: 74 VSWTALVSAYARRGMLRDARELFDR---PDARRNVVTWTALLSGYARARLVDEAEALFQR 130
Query: 102 AMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
+ + NV+ +L+ YA GR+ A +FD M V+ + +WN ++ +R
Sbjct: 131 -----------MPQRNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVR 179
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G ++ A +F MP RD ++WT +++G + G +EA F M E + V+ ++
Sbjct: 180 SGSVDKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDSMP----ERNVVSWNAM 235
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
++ + L + + ++D + CN ++ + + ++ AR++F M +R +
Sbjct: 236 ISGYTRNHRIDEALDLFMKMPERD----IASCNIMVTGFIQNKDLKRARELFDEMPERNV 291
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR---- 337
V+W +++ G+ AL F+ M G +P+ V+F GAL ACS + +G +
Sbjct: 292 VTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEGKQVHQM 351
Query: 338 ------YFD------------------IMKKIYRVSPRIE--HYGCIVDLYSRAGRLEDA 371
FD + +K++ +S + + I+ Y+ G +A
Sbjct: 352 ICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEA 411
Query: 372 LNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGV---DSNYVLLA 425
+ + E M +PN+V LL+AC G + ++ + +V+ D + D +Y L
Sbjct: 412 ILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVN-DRSIAVRDEHYTCLI 470
Query: 426 NMYAAVGKWDGAGKIRRTMK 445
++ + G+ D A ++ +K
Sbjct: 471 DLCSRAGRLDDAKRLIHYLK 490
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 147/345 (42%), Gaps = 51/345 (14%)
Query: 124 LLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV-RDAIS 182
L+ A GR+ A +FD +W A++ Y RRG + A +FD R+ ++
Sbjct: 48 LIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDRPDARRNVVT 107
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG---------- 232
WTALL+G+ + +EA F+ M + + V+ ++L A A G +G
Sbjct: 108 WTALLSGYARARLVDEAEALFQRMP----QRNVVSWNTMLEAYAAAGRVGDACALFDRMP 163
Query: 233 ---IGLW--------------IHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQR 275
G W R + + + +V T++D +R G ++ AR +F
Sbjct: 164 VRDAGSWNILLATLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDS 223
Query: 276 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG 335
M +R +VSWN++I G+ N + EAL+ F M + + TG + ++
Sbjct: 224 MPERNVVSWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKD----LKRA 279
Query: 336 LRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPM---KPNEVVLGSLLA 392
FD M + V+ + +++ Y + + E AL + M M +PN+V L
Sbjct: 280 RELFDEMPERNVVT-----WTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALD 334
Query: 393 ACRTKGDII----LAERLMKYLVDLDPGVDSNYVLLANMYAAVGK 433
AC + + + + K D V+S L N+YA G+
Sbjct: 335 ACSDLAALCEGKQVHQMICKTTFQFDAFVES---ALMNVYAKCGE 376
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 19/254 (7%)
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
Y +G M A+ A+ ++ S N +I G + A ++FD P D +SWTAL+
Sbjct: 24 YVSYGSMGAASA---AVGLEQSHDPNRLIAELAAAGRVWDARKLFDGTPDWDVVSWTALV 80
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
+ + +RG +A E F + VT ++L+ A + + ++ +
Sbjct: 81 SAYARRGMLRDARELFDR---PDARRNVVTWTALLSGYARARLVDEA----EALFQRMPQ 133
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
NV NT+++ Y+ G + A +F RM R SWN ++ +G V +A E F M
Sbjct: 134 RNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVRSGSVDKARELFGRM 193
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+ D +++T + + +G +++ FD M + VS + ++ Y+R R
Sbjct: 194 PER----DVMAWTTMVDGVARSGKVDEARVLFDSMPERNVVS-----WNAMISGYTRNHR 244
Query: 368 LEDALNVVENMPMK 381
+++AL++ MP +
Sbjct: 245 IDEALDLFMKMPER 258
>gi|242091784|ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
gi|241914605|gb|EER87749.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
Length = 507
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/396 (39%), Positives = 247/396 (62%), Gaps = 5/396 (1%)
Query: 103 MIHGLVCKLG--LDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKS-SFTWNAMIDGY 159
+ H L+ K G + + +AL+ YA+ G + + VFD + S + NA++ Y
Sbjct: 102 LAHALLSKSGHAASSGDPYLASALVASYARSGHLAESRRVFDELPPHSDAAARNALLSAY 161
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTI 218
R G ++ A +F MP R+ ISWTA+++G+ + G EEA+ F EM + GV P+ VT+
Sbjct: 162 ARCGRVDDAESLFAGMPDRNVISWTAMVSGYAQNGRHEEAVRTFLEMWEGCGVRPNEVTV 221
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
SVL ACA VG L +G + RY + NV V N L+++Y++CG I A VF+ + K
Sbjct: 222 SSVLPACAAVGALALGRKVERYARGRGMLTNVYVANALVEMYAKCGSIRRAWMVFRGIGK 281
Query: 279 -RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
R L SWNS+I+ FAV+G E L F+ ++ G KPDG++F G + AC+H GL+++G
Sbjct: 282 QRDLCSWNSMIMAFAVHGLWREVLGLFHKLRMTGAKPDGITFVGVILACTHGGLVDEGKL 341
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
F+ M++ + + PRIEHYGC+VDL RAG L++A +++ +MPM+P+ V+ G+LL AC
Sbjct: 342 LFNSMREEFGLKPRIEHYGCMVDLLGRAGLLKEADSLIASMPMEPDAVIWGALLGACSFH 401
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G++ LAE ++ L+ L+P +N V+L+N+YA+ GKWDG ++ + +K + +K G S
Sbjct: 402 GNLELAEVAVEKLMRLEPQNTANLVILSNIYASHGKWDGVAQVWKLLKEKDHKKSAGYSF 461
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493
IE+ +H+F+ D+SH E +Y L+ ++ +KL
Sbjct: 462 IELDGRMHKFLVEDKSHPIYEMVYDTLDSITLIMKL 497
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 113/255 (44%), Gaps = 38/255 (14%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLH-GTNPNHITFITLLSGCADFPSQCLFLGAM 103
+ WT+ +S + ++GR EA F M G PN +T ++L CA + L LG
Sbjct: 182 VISWTAMVSGYAQNGRHEEAVRTFLEMWEGCGVRPNEVTVSSVLPACAAVGA--LALGRK 239
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
+ G+ NV V AL++MYAK G + A +VF + +
Sbjct: 240 VERYARGRGM-LTNVYVANALVEMYAKCGSIRRAWMVFRGIGKQ---------------- 282
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
RD SW +++ F G + E L F +++++G +PD +T + V+
Sbjct: 283 --------------RDLCSWNSMIMAFAVHGLWREVLGLFHKLRMTGAKPDGITFVGVIL 328
Query: 224 ACANVGTLGIGLWIHRYVLKQDF--KDNVKVCNTLIDLYSRCGCIEFARQVFQRM-HKRT 280
AC + G + G + ++++F K ++ ++DL R G ++ A + M +
Sbjct: 329 ACTHGGLVDEGKLLFN-SMREEFGLKPRIEHYGCMVDLLGRAGLLKEADSLIASMPMEPD 387
Query: 281 LVSWNSIIVGFAVNG 295
V W +++ + +G
Sbjct: 388 AVIWGALLGACSFHG 402
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/454 (36%), Positives = 258/454 (56%), Gaps = 17/454 (3%)
Query: 39 KSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCL 98
+S+V V WT+ I+ + R+ + EA F M PN +T I LLS C+
Sbjct: 212 ESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDS-- 269
Query: 99 FLGAMIH------GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTW 152
+G +H + C L L A+LDMY K G + A +F+ M + F+W
Sbjct: 270 EMGKTLHEHIRRKDITCSLNL-------LNAMLDMYVKCGCLTTAREIFNNMERRDVFSW 322
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGV 211
++++GY + GD+ SA ++FDEMP R+ +SW A++ G+ + EALE F M + G+
Sbjct: 323 TSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGL 382
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIH-RYVLKQDFKDNVKVCNTLIDLYSRCGCIEFAR 270
P T++ VL+A +G L +G IH +V K + ++ + N ++D+Y++CG I+ A
Sbjct: 383 VPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAA 442
Query: 271 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAG 330
++F M ++ LVSWNS+I +A G +AL F+ M G KPD ++F G L+ACS+ G
Sbjct: 443 KLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYGG 502
Query: 331 LIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSL 390
+ +G +F+ M+ + V P+ EHY C+VDL SR G L++A ++ MPM+ +E G+L
Sbjct: 503 FVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEASEGGWGAL 562
Query: 391 LAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQ 450
L ACR G++ +A+ + L++LDP Y LLAN+ A KW +RR M+ RG++
Sbjct: 563 LDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVRMVRRMMRERGVK 622
Query: 451 KKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSML 484
K PG S IEI HEF+ D SH S IY ++
Sbjct: 623 KVPGHSLIEIEGKFHEFLVADTSHTRSSEIYRVV 656
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 208/463 (44%), Gaps = 69/463 (14%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I +C++ + F +M + + +F+ L C F + +G +H +
Sbjct: 120 WNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEK--IVGMAVHSV 177
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ K G D DL F N +I Y+ G +
Sbjct: 178 IWKRGFDS-------------------DL-------------FVQNGLIQNYVETGCLGF 205
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A +MFDE V+D ++WT ++NG+ + + +EA+ F M S V+P+ VT+I++L+AC+
Sbjct: 206 ARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQ 265
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSI 287
G +G +H ++ ++D ++ + N ++D+Y +CGC+ AR++F M +R + SW S+
Sbjct: 266 KGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSL 325
Query: 288 IVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYR 347
+ G+A NG +G A + F+ M + VS+ + S + L F M +
Sbjct: 326 LNGYAKNGDLGSARKLFDEMPERNI----VSWNAMIAGYSQNSQPMEALELFHNMVDVVG 381
Query: 348 VSPRIEHYGCIVDLYSRAGRLEDA----LNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
+ P + C++ + G LE N V + ++ + ++ +++ G I A
Sbjct: 382 LVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAA 441
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPG-------LS 456
+L + + + V N ++ A YA+ G A + M G G+ KP LS
Sbjct: 442 AKLFHSMPEKNL-VSWNSMISA--YASYGHAKKALTLFDQMIGSGL--KPDHITFIGVLS 496
Query: 457 SIEIGSGIHEFMAGDRSHIES-----------EHIYSMLELLS 488
+ G F++ ++H ES EH M++LLS
Sbjct: 497 ACSYGG----FVSEGQAHFESMENCFGVEPKREHYACMVDLLS 535
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 118/244 (48%), Gaps = 2/244 (0%)
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
GDI A +FD+ + + W ++ G+ K + FR+M + E D + + L
Sbjct: 100 GDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFAL 159
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC +G+ +H + K+ F ++ V N LI Y GC+ FARQ+F + +V
Sbjct: 160 KACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVV 219
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIM 342
+W ++I G+A N ++ EA+ FNSM KP+ V+ L+ACS G E G + +
Sbjct: 220 TWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHI 279
Query: 343 KKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIIL 402
++ ++ + ++D+Y + G L A + NM + + SLL GD+
Sbjct: 280 RR-KDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERR-DVFSWTSLLNGYAKNGDLGS 337
Query: 403 AERL 406
A +L
Sbjct: 338 ARKL 341
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 255/447 (57%), Gaps = 11/447 (2%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
+ WTS I + ++G + EA + F RM + +S ++ LF I
Sbjct: 199 VISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMVSAYMSVGNLVAARNLFELMPI 258
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H +V ++ K G MD A FD M+ ++ +W +IDGY++ GD
Sbjct: 259 H-----------DVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGD 307
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+++A +FD+MP ++ ++W+ ++ G+ K G+ +L+ ++ + G++PD + +++A
Sbjct: 308 VDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISA 367
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C+ +G + + N++V +LID+Y++CG IE A QVF+ + ++ L +
Sbjct: 368 CSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCY 427
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
+++I FA +G +A+ F+ MQK KPDGV+F G LTAC+H GL+ +G R F M
Sbjct: 428 STVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMID 487
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
Y + P +HY C+VD+ RAG LE+A +++ +MP+ PN V G+LL+ACR ++ LAE
Sbjct: 488 EYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNATVWGALLSACRVHLNVQLAE 547
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
L ++P NYVLL N+YA G+WD K+R ++ ++K G S IE+GS I
Sbjct: 548 AAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRAMIRENRVRKNRGSSWIELGSVI 607
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDL 491
HEF+ GD+SH +SE I+ MLELL D+
Sbjct: 608 HEFVMGDKSHFDSERIFFMLELLCKDM 634
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 172/362 (47%), Gaps = 37/362 (10%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
WT+ I + + A F +M P + T ++L + + G +++GL
Sbjct: 70 WTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGR--IKDGDLVYGL 127
Query: 108 VCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIES 167
+ G + + ++V +++++ + G M A +FD M + + +WN+MI GY G ++
Sbjct: 128 AVRCGYEFD-LVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDI 186
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++FD M R+ ISWT+++ G+VK G EA F M E D + +++A +
Sbjct: 187 ARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMP----EKDLASWKVMVSAYMS 242
Query: 228 VGTL-------------GIGLW---------IHRYVLKQDFKD-----NVKVCNTLIDLY 260
VG L +G W ++F D NV +ID Y
Sbjct: 243 VGNLVAARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGY 302
Query: 261 SRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFT 320
+ G ++ AR VF +M ++ LV+W+++I G+A G +L+ + + +++G KPD
Sbjct: 303 IKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFAL 362
Query: 321 GALTACSHAGLIEDGLRYF-DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP 379
G ++ACS G+ + D + + P ++ ++D+Y++ G +E A+ V E +
Sbjct: 363 GIISACSQLGVPDTAESVICDFVGP--SLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVD 420
Query: 380 MK 381
K
Sbjct: 421 QK 422
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 148/302 (49%), Gaps = 13/302 (4%)
Query: 148 SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ 207
S T N ++ Y + G + A ++FDE P ++ WTAL++GF + +E A F +M
Sbjct: 35 SDLTLNKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMH 94
Query: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267
+ P TI SVL A + +G + G ++ ++ ++ ++ V N +I+L+ RCG +
Sbjct: 95 RENIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMG 154
Query: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327
ARQ+F M +R VSWNS+I G+ NG V A + F+ M++ +S+T +
Sbjct: 155 SARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNV----ISWTSMIQGYV 210
Query: 328 HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387
AG + + F+ M + + + +V Y G L A N+ E MP+ +
Sbjct: 211 KAGDLLEARVLFERMPE-----KDLASWKVMVSAYMSVGNLVAARNLFELMPIH-DVGTW 264
Query: 388 GSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447
+++ C G++ A+ + + + +++V++ + Y VG D A + M +
Sbjct: 265 NLMISGCCKAGEMDAAKEFFDRMQERNV---ASWVMIIDGYIKVGDVDAARSVFDQMPEK 321
Query: 448 GI 449
+
Sbjct: 322 NL 323
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/456 (34%), Positives = 246/456 (53%), Gaps = 34/456 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
TV WT+ I+ + +GR EA G P+ T + +L+ CA L G +
Sbjct: 142 TVSWTALITAYMDAGRGLEAIGVARSAFASGVRPDSFTAVRVLTACARVAD--LVTGEEV 199
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
K G+ NV V TA +D+Y K G+
Sbjct: 200 WTAAEKEGI-AGNVFVATAAVDLYVKC-------------------------------GE 227
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
++ A +FD+M +D ++W A++ G+ G+ EALE F MQ+ G+ PD T+ L+A
Sbjct: 228 MDKARGVFDKMKNKDVVAWGAMVGGYASNGHPREALELFFAMQVEGMRPDCYTVAGALSA 287
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
C +G L +G + + + N + LID+Y++CG A VFQ+M R ++ W
Sbjct: 288 CTRLGALDLGRRVVGMLQWDEVLGNPVLGTALIDMYAKCGSTGEAWMVFQKMRNRDIIVW 347
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I+G + G A M+K G + +F G L +C+H GL++DG RYF M +
Sbjct: 348 NAMILGLGMTGHEKIAFALVGQMKKSGMTLNDNTFIGLLCSCTHTGLVKDGRRYFRNMTQ 407
Query: 345 IYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAE 404
+Y + PRIEHYG +VDL SRAG L++A ++++MPM+ N VV G+LL C+ + LAE
Sbjct: 408 LYHIRPRIEHYGIMVDLLSRAGLLQEAHQLIQDMPMEANAVVWGALLGGCKIHRNADLAE 467
Query: 405 RLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGI 464
++K L+ L+P NYV+L+N+Y+ G+W+ A K+R MK +G++K P S +E+ +
Sbjct: 468 HVLKQLIQLEPWNSGNYVVLSNIYSNSGRWEDAAKLRLEMKAKGVEKVPASSWVELDGKV 527
Query: 465 HEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
HEF GD+SH S+ IY+ L+ L ++K GY P T
Sbjct: 528 HEFHVGDKSHPLSDQIYAKLDELGMEMKAMGYKPST 563
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 149/314 (47%), Gaps = 35/314 (11%)
Query: 66 LEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALL 125
L R H NP+H+TF + + P L GA +H KL +N V T+LL
Sbjct: 60 LHVLRFHSHLPNPSHLTFPFAIKSASRLPDP-LTAGAQLHARSLKLP-SHSNPHVLTSLL 117
Query: 126 DMYAKFGRMDLATVVFDAMRV-KSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWT 184
++YA+ GR+ A FD MR S+ +W A+I YM G
Sbjct: 118 NLYARCGRLHDAQKAFDEMRQPPSTVSWTALITAYMDAG--------------------- 156
Query: 185 ALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQ 244
RG EA+ R SGV PD T + VL ACA V L G + K+
Sbjct: 157 --------RGL--EAIGVARSAFASGVRPDSFTAVRVLTACARVADLVTGEEVWTAAEKE 206
Query: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
NV V +DLY +CG ++ AR VF +M + +V+W +++ G+A NG EALE F
Sbjct: 207 GIAGNVFVATAAVDLYVKCGEMDKARGVFDKMKNKDVVAWGAMVGGYASNGHPREALELF 266
Query: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
+MQ EG +PD + GAL+AC+ G ++ G R +++ + + ++D+Y++
Sbjct: 267 FAMQVEGMRPDCYTVAGALSACTRLGALDLGRRVVGMLQWDEVLGNPVLGT-ALIDMYAK 325
Query: 365 AGRLEDALNVVENM 378
G +A V + M
Sbjct: 326 CGSTGEAWMVFQKM 339
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/433 (37%), Positives = 245/433 (56%), Gaps = 35/433 (8%)
Query: 68 FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDM 127
F RM G P+ TF++LL CA ++ G H + KLG ++ + T L++M
Sbjct: 121 FVRMLEEGVAPDTYTFVSLLKACA--AARAGEHGRQAHAVAVKLGAAGHDYVRPT-LINM 177
Query: 128 YAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALL 187
YA+ G A V F R D + V S+ A++
Sbjct: 178 YAECGDARAARVTFG-------------------RADGDCVV------------SYNAMI 206
Query: 188 NGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK 247
V+ EAL FREMQ G+ P VT+ISVL+ACA +G L +G W+H YV K
Sbjct: 207 AAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRWLHDYVRKLGLG 266
Query: 248 DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSM 307
VKV L+D+Y++CG +E A VFQ M R +W+ +IV +A +G+ EA+ F M
Sbjct: 267 SLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLFEEM 326
Query: 308 QKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGR 367
+K+G KPD ++F G L ACSH+GL+ +GLRYFD MK + + P I+HYGC+ DL +R+G+
Sbjct: 327 KKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMKD-HGIVPGIKHYGCVTDLLARSGQ 385
Query: 368 LEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANM 427
LE A ++ +P+ P ++ +LL+AC GD+ L +R+ + +++LD +YV+ +N+
Sbjct: 386 LERAYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSHGGDYVIFSNL 445
Query: 428 YAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELL 487
A G W+ ++R+ M +G+ K PG SSIEI + +HEF AGD H +S+ M++ +
Sbjct: 446 CANTGYWEEMNRVRKLMSDKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEV 505
Query: 488 SFDLKLCGYVPET 500
LKL GY+P+T
Sbjct: 506 IDQLKLVGYIPDT 518
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 119/259 (45%), Gaps = 45/259 (17%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V + + I+ RS R EA + F M G NP +T I++LS CA + L LG +
Sbjct: 199 VVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGA--LQLGRWL 256
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V KLGL + V V TAL+DMYAK G
Sbjct: 257 HDYVRKLGLG-SLVKVSTALVDMYAKCG-------------------------------S 284
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
+E A+ +F M RD +W+ ++ + GY EA+ F EM+ G++PD +T + +L A
Sbjct: 285 LEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLYA 344
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDN-----VKVCNTLIDLYSRCGCIEFARQVFQRMH-K 278
C++ G + GL RY D KD+ +K + DL +R G +E A + +
Sbjct: 345 CSHSGLVSEGL---RYF--DDMKDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPIN 399
Query: 279 RTLVSWNSIIVGFAVNGFV 297
T + W +++ +G V
Sbjct: 400 PTPILWRTLLSACGGHGDV 418
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 135/318 (42%), Gaps = 50/318 (15%)
Query: 168 AVRMFDEMP-VRDAISWTALLNGFVKRGYFEEA-----LECFREMQISGVEPDYVTIISV 221
A ++FD + DA+ + LL G+ + + + F M GV PD T +S+
Sbjct: 80 ARQVFDRVTQPSDAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEGVAPDTYTFVSL 139
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTL 281
L ACA G H +K + V TLI++Y+ CG AR F R +
Sbjct: 140 LKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRADGDCV 199
Query: 282 VSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDI 341
VS+N++I + GEAL F MQ +G P V+ L+AC+ G ++ G D
Sbjct: 200 VSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRWLHDY 259
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMP---------------------- 379
++K+ + ++ +VD+Y++ G LEDA+ V + M
Sbjct: 260 VRKL-GLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGRE 318
Query: 380 ------------MKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD-----PGVDSNYV 422
MKP+++ LL AC G L ++Y D+ PG+ +Y
Sbjct: 319 AISLFEEMKKQGMKPDDITFLGLLYACSHSG---LVSEGLRYFDDMKDHGIVPGI-KHYG 374
Query: 423 LLANMYAAVGKWDGAGKI 440
+ ++ A G+ + A K
Sbjct: 375 CVTDLLARSGQLERAYKF 392
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/487 (34%), Positives = 269/487 (55%), Gaps = 40/487 (8%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V W IS + + G + +A M L + +T TL+S AD + L LG
Sbjct: 266 VVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRN--LKLGKEG 323
Query: 105 HGLVC----------------------KLGLDR--------NNVMVGTALLDMYAKFGRM 134
H K+G R ++++ +L +A+ G
Sbjct: 324 HCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHS 383
Query: 135 DLATVVFDAMRVKSS----FTWNAMIDGYMRRGDIESAVRMFDEMPVR----DAISWTAL 186
A +F M+++S +WN++I G++ G + A MF +M + ++WT L
Sbjct: 384 GEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQMQSLGVQPNLVTWTTL 443
Query: 187 LNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF 246
++G + G+ EA+ F+ MQ +GV+P+ V+II VL AC N+ +L IG +H Y+++
Sbjct: 444 ISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQIGRALHGYLIRHSL 503
Query: 247 KDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNS 306
++ + +L+D+Y++CG + A++VF + + L +N++I GFA++G EAL +
Sbjct: 504 YLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMISGFALHGQAVEALALYRC 563
Query: 307 MQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAG 366
+++EG KPD ++FT AL ACSHA ++ +GL F M + ++P IEHYGC+V L SR G
Sbjct: 564 LKEEGLKPDNITFTNALYACSHAMMVSEGLELFVDMVSNHNINPSIEHYGCMVSLLSRCG 623
Query: 367 RLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLAN 426
L++A ++ MP KP+ +LGSLLAACR I L E L L+ L P NYV ++N
Sbjct: 624 DLDEAFGLISAMPYKPDVQILGSLLAACREHNKIELEEYLSNQLLKLQPDNSGNYVAMSN 683
Query: 427 MYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLEL 486
YAA G+WD K+R+ MK RG++K PG S I++G ++ F+AGD+SH E+E IY+ L L
Sbjct: 684 AYAAAGRWDEVKKVRQLMKERGLRKIPGCSWIQVGEELNVFVAGDKSHPETEEIYTTLAL 743
Query: 487 LSFDLKL 493
L ++
Sbjct: 744 LLMEISF 750
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 203/455 (44%), Gaps = 68/455 (14%)
Query: 48 WTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGL 107
W + I +CR G EA L F M +G P++ +L C + + +G ++HGL
Sbjct: 81 WAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGL--EWIRIGKVVHGL 138
Query: 108 VC----------------KLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMR------ 145
V G+ + N + +++ Y + G + A VF MR
Sbjct: 139 VSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEP 198
Query: 146 --------VKSSFTWNAMIDG-------------------------YMRRGDIESAVRMF 172
+ +S A+ DG Y + G IE A +F
Sbjct: 199 TQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVF 258
Query: 173 DEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLG 232
M +D ++W L++G+V+ G ++AL M++ + D VT+ ++++A A++ L
Sbjct: 259 SRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLK 318
Query: 233 IGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA 292
+G H Y ++ + + +V V ++++D+Y++C I AR+VF + L+ WN+++ FA
Sbjct: 319 LGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFA 378
Query: 293 VNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRI 352
G GEAL F MQ E P+ +S+ + ++G + + F M+ + V P +
Sbjct: 379 ELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQMQSL-GVQPNL 437
Query: 353 EHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKY 409
+ ++ +R+G +A+ + M +KPN V + +L AC + + L Y
Sbjct: 438 VTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQIGRALHGY 497
Query: 410 LVD----LDPGVDSNYVLLANMYAAVGKWDGAGKI 440
L+ L + ++ L +MYA G D A ++
Sbjct: 498 LIRHSLYLSIPIATS---LVDMYAKCGDRDQAKRV 529
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 120/233 (51%), Gaps = 17/233 (7%)
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
Y + + E++ +F + +++ SW A++ ++G+++EAL F+EMQ +G+ PD +
Sbjct: 57 YAKCDNPEASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVL 116
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+VL AC + + IG +H V C + ++ ++ M +
Sbjct: 117 PNVLKACGGLEWIRIGKVVHGLV----------SCGYVWKMWGG----GGCKKGVCGMPQ 162
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R V+WNS+IVG+ NG EA+E F M++EG +P V+ + L+A ++ G ++DG +
Sbjct: 163 RNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQG 222
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLL 391
I I + +++ YS+ G +EDA +V M K +VV +LL
Sbjct: 223 HAI-AVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEK--DVVTWNLL 272
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 59/297 (19%)
Query: 86 LLSGCADFPSQCLFLGAMIHGLVCKLG-LDRNNVMVGTALLDMYAKFGRMDLATVVFDAM 144
LL GC + L G IH + K G + N + T L+ YAK + + +F +
Sbjct: 16 LLQGCV--YERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRRV 73
Query: 145 RVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVR----------------DAISWT---A 185
R+K+ F+W A+I R+G + A+ F EM + W
Sbjct: 74 RLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGK 133
Query: 186 LLNGFVKRGYF-------------------------------------EEALECFREMQI 208
+++G V GY EEA+E F EM+
Sbjct: 134 VVHGLVSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMRE 193
Query: 209 SGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEF 268
GVEP VT+ S L+A AN+G L G H + + + ++LI+ YS+ G IE
Sbjct: 194 EGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIED 253
Query: 269 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTA 325
A VF RM ++ +V+WN +I G+ G V +AL + M+ E + D V+ ++A
Sbjct: 254 AESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSA 310
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 9/128 (7%)
Query: 221 VLNACANVGTLGIGLWIHRYVLKQD--FKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
+L C L G IH ++K+ F N + L+ Y++C E + +F+R+
Sbjct: 16 LLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRRVRL 75
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ + SW ++I GF EAL F MQ+ G PD L AC GL +
Sbjct: 76 KNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACG-------GLEW 128
Query: 339 FDIMKKIY 346
I K ++
Sbjct: 129 IRIGKVVH 136
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/455 (35%), Positives = 250/455 (54%), Gaps = 35/455 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT+ I+ ++ R +A L F +M G PNH T +LL A L G +H
Sbjct: 155 VTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLK--ASGSEHGLDPGTQLH 212
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
K G +++V VG+AL+DMYA R G +
Sbjct: 213 AFCLKYGY-QSSVYVGSALVDMYA-------------------------------RCGHM 240
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
++A FD MP + +SW AL++G ++G E AL +MQ +P + T SV +AC
Sbjct: 241 DAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSAC 300
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++G L G W+H +++K K + NTL+D+Y++ G I+ A++VF R+ K +VSWN
Sbjct: 301 ASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWN 360
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+++ G A +G E L+ F M + G +P+ +SF LTACSH+GL+++GL YF++MKK
Sbjct: 361 TMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK- 419
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y+V P + HY VDL R G L+ A + MP++P V G+LL ACR ++ L
Sbjct: 420 YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVY 479
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ +LDP +LL+N+YA+ G+W K+R+ MK G++K+P S +EI + +H
Sbjct: 480 AAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVH 539
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
F+A D +H + + I E +S +K GYVP+T
Sbjct: 540 LFVANDETHPQIKEIRGKWEEISGKIKEIGYVPDT 574
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 167/308 (54%), Gaps = 13/308 (4%)
Query: 122 TALLDMYAKFGRMDLATVVFDAMRVKSSFT------WNAMIDGYMRRGDIESAVRMFDEM 175
+ LL + G+++ +V A V S F N +++ Y + G ++ A RMFDEM
Sbjct: 91 SKLLKECTRLGKVEQGRIVH-AHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149
Query: 176 PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGL 235
P +D ++WTAL+ GF + +AL F +M G++P++ T+ S+L A + L G
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGT 209
Query: 236 WIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 295
+H + LK ++ +V V + L+D+Y+RCG ++ A+ F M ++ VSWN++I G A G
Sbjct: 210 QLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKG 269
Query: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG-LRYFDIMKKIYRVSPRIEH 354
AL MQ++ F+P +++ +AC+ G +E G + ++K ++ I +
Sbjct: 270 EGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGN 329
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
++D+Y++AG ++DA V + + +KP+ V ++L C G + E L ++ L
Sbjct: 330 --TLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQHG--LGKETLDRFEQMLR 384
Query: 415 PGVDSNYV 422
G++ N +
Sbjct: 385 IGIEPNEI 392
>gi|38345134|emb|CAE02724.2| OSJNBa0055H05.11 [Oryza sativa Japonica Group]
gi|215697200|dbj|BAG91194.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 408
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/401 (38%), Positives = 235/401 (58%), Gaps = 7/401 (1%)
Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHG--LVCKLGLDRNNVMVGTALLDMYAKFGRMD 135
P+ + T+LS CA ++ L G IH LV +D V AL++MYA M+
Sbjct: 8 PDQVIIATVLSTCAH--TRNLRFGKAIHSYMLVSDTLIDAQ---VSCALMNMYASCADME 62
Query: 136 LATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGY 195
+A +++ + K M+ GY + G +E A +F+ MP +D +SW+A++ G+ +
Sbjct: 63 MAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSK 122
Query: 196 FEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNT 255
EAL F +MQ SGV+PD +T++SV++ACANVG L IH +V + + N
Sbjct: 123 PMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPIGNA 182
Query: 256 LIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
LID++S+CG + A VF M ++ +V+W SII A++G AL F +M+ EG +P+
Sbjct: 183 LIDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPN 242
Query: 316 GVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVV 375
GV+F G L AC HAGL+E+G F IM + YR+ P EHYGC+VDL RA L A +++
Sbjct: 243 GVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLI 302
Query: 376 ENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWD 435
++M ++PN V+ GSLLAACR GD+ L K +++LDP VLL+N+YA G W+
Sbjct: 303 QSMHLRPNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNWN 362
Query: 436 GAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIE 476
++R M+ +G KK G S +E+ +H+F G +E
Sbjct: 363 DVKEVRGVMEVQGTWKKKGCSWMELNGSVHQFAVGGEKILE 403
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 105/225 (46%), Gaps = 33/225 (14%)
Query: 206 MQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC-- 263
M+ S V PD V I +VL+ CA+ L G IH Y+L D + +V L+++Y+ C
Sbjct: 1 MKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCAD 60
Query: 264 -----------------------------GCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 294
G +E A +F M + +VSW+++I G+A +
Sbjct: 61 MEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAES 120
Query: 295 GFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEH 354
EAL F+ MQ+ G KPD ++ ++AC++ G +E R + + + +
Sbjct: 121 SKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKA-RCIHSFVENHSMCKILPI 179
Query: 355 YGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
++D++S+ G L AL+V MP K N V S++ A GD
Sbjct: 180 GNALIDMFSKCGSLTLALDVFNAMPQK-NVVTWTSIITASAMHGD 223
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/459 (34%), Positives = 271/459 (59%), Gaps = 24/459 (5%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I+ + R+ EA F RM + I++ T+++G + +
Sbjct: 192 VSWNTVITAFMQRRRVDEAQELFNRMP----ERDVISWTTMVAGLSK------------N 235
Query: 106 GLV--CKLGLDR---NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G + +L D+ NV+ ++ YA+ R+D A +F+ M + +WN MI G++
Sbjct: 236 GRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFI 295
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTII 219
+ G +E AV F +M ++ ++WTA+++G V+ G EEAL+ F EMQ + V+P+ T +
Sbjct: 296 QNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFV 355
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ--RMH 277
SVL AC+ + L G IH+ + K +++ V + LI++YS+CG +E AR++F +
Sbjct: 356 SVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIG 415
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
R +VSWN +I +A +G +A+ F+ MQ GF+PD V++ L+ACSHAGL+++GL+
Sbjct: 416 HRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLK 475
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
F+ + + + R +H+ C+VDL+ RAGRL++A + ++ + +KP+ V +LLA C
Sbjct: 476 LFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVH 535
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G I L + + L++ +P Y++L+N+YA+ GKW A +R MK +G++K+PG S
Sbjct: 536 GHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSW 595
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGY 496
IE+G+ +H F+ GD SH E E+IY +L L +K G+
Sbjct: 596 IEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGH 634
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 162/342 (47%), Gaps = 59/342 (17%)
Query: 109 CKLGLDRN----NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
K DRN NV+ TAL+ Y ++ R++ A +FDAM VK+ +WN MI+GY R+G
Sbjct: 116 AKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGW 175
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A+ +F++MP R+ +SW ++ F++R +EA E F M E D ++
Sbjct: 176 IDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMP----ERDVIS------- 224
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
W T++ S+ G I+ AR +F +M R +VSW
Sbjct: 225 -----------W-----------------TTMVAGLSKNGRIDDARLLFDKMPVRNVVSW 256
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I+G+A N + EA + F M + S+ +T G +E + +F
Sbjct: 257 NTMIIGYAQNMRLDEAFKLFEQMPERELS----SWNTMITGFIQNGKLERAVDFF----- 307
Query: 345 IYRVSPR-IEHYGCIVDLYSRAGRLEDALNVVENMP----MKPNEVVLGSLLAACRTKGD 399
Y++S + + + ++ + + GR E+AL + M +KPNE S+L AC
Sbjct: 308 -YKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAA 366
Query: 400 IILAERLMKYLVD-LDPGVDSNYVLLANMYAAVGKWDGAGKI 440
+ +++ + + + V L NMY+ G+ + A KI
Sbjct: 367 LCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKI 408
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 18/230 (7%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF-REMQISGV 211
N +I + G I A ++F+EMP RD +SWTA++ G++K G EEA F R I V
Sbjct: 70 NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNV 129
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
VT ++++ + R + NV NT+I+ Y+R G I+ A
Sbjct: 130 ----VTWTALVSGYVRWNRIEEA----RRLFDAMPVKNVISWNTMIEGYARKGWIDQALD 181
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
+F++M +R +VSWN++I F V EA E FN M + D +S+T + S G
Sbjct: 182 LFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPER----DVISWTTMVAGLSKNGR 237
Query: 332 IEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
I+D FD M VS + ++ Y++ RL++A + E MP +
Sbjct: 238 IDDARLLFDKMPVRNVVS-----WNTMIIGYAQNMRLDEAFKLFEQMPER 282
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 11/173 (6%)
Query: 244 QDFKDNVKVC--NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
+DF N V N LI + G I ARQVF+ M R +VSW ++I G+ G + EA
Sbjct: 58 RDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAK 117
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
F+ + + K + V++T ++ IE+ R FD M +S + +++
Sbjct: 118 TLFD--RNDAIK-NVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVIS-----WNTMIEG 169
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
Y+R G ++ AL++ E MP + N V +++ A + + A+ L + + D
Sbjct: 170 YARKGWIDQALDLFEKMPER-NVVSWNTVITAFMQRRRVDEAQELFNRMPERD 221
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 252/461 (54%), Gaps = 37/461 (8%)
Query: 42 VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101
V V W + I ++ EA +M GT N T ++L CA +C L
Sbjct: 106 VKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCA---FKCAILE 162
Query: 102 AM-IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
M +H K +D +N VGTALL +YAK
Sbjct: 163 CMQLHAFSIKAAID-SNCFVGTALLHVYAKCS---------------------------- 193
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIIS 220
I+ A +MF+ MP ++A++W++++ G+V+ G+ EEAL FR Q+ G + D I S
Sbjct: 194 ---SIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISS 250
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ-RMHKR 279
++ACA + TL G +H K F N+ V ++LID+Y++CGCI A VFQ + R
Sbjct: 251 AVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVR 310
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYF 339
++V WN++I GFA + EA+ F MQ+ GF PD V++ L ACSH GL E+G +YF
Sbjct: 311 SIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYF 370
Query: 340 DIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGD 399
D+M + + +SP + HY C++D+ RAG + A +++E MP + GSLLA+C+ G+
Sbjct: 371 DLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGN 430
Query: 400 IILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIE 459
I AE KYL +++P N++LLAN+YAA KWD + R+ ++ ++K+ G S IE
Sbjct: 431 IEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETDVRKERGTSWIE 490
Query: 460 IGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
I + IH F G+R+H + + IY+ L+ L +LK Y +T
Sbjct: 491 IKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDT 531
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 135/295 (45%), Gaps = 37/295 (12%)
Query: 150 FTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS 209
T N +I+ Y + ++SA + F+EMPV+ +SW ++ + EAL+ +MQ
Sbjct: 79 LTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQRE 138
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
G + TI SVL CA + + +H + +K N V L+ +Y++C I+ A
Sbjct: 139 GTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDA 198
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
Q+F+ M ++ V+W+S++ G+ NGF EAL F + Q GF D + A++AC+
Sbjct: 199 SQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGL 258
Query: 330 GLIEDGLRYFDIMKK------IYRVSPRIEHY---GCIVDLY------------------ 362
+ +G + I K IY S I+ Y GCI + Y
Sbjct: 259 ATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAM 318
Query: 363 ----SRAGRLEDALNVVENMPMK---PNEVVLGSLLAACRTKGDIILAERLMKYL 410
+R R +A+ + E M + P++V +L AC G L E KY
Sbjct: 319 ISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMG---LHEEGQKYF 370
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 221 VLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRT 280
+L CA + G H +++ + ++ N LI++YS+C ++ AR+ F M ++
Sbjct: 49 LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108
Query: 281 LVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFD 340
LVSWN++I N EAL+ MQ+EG + + + L C+ I + ++
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQL-- 166
Query: 341 IMKKIYRVSPRIEHYGCIV-----DLYSRAGRLEDALNVVENMPMKPNEVVLGSLLA 392
+ + I+ C V +Y++ ++DA + E+MP K N V S++A
Sbjct: 167 ---HAFSIKAAIDS-NCFVGTALLHVYAKCSSIKDASQMFESMPEK-NAVTWSSMMA 218
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/457 (34%), Positives = 254/457 (55%), Gaps = 35/457 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
+ WT+ I+ + +SG + A+E F +M PNH +F ++L C + + G
Sbjct: 125 VMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP--YTGEQ 182
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
++ KLG+ N VG +L+ MYA R G
Sbjct: 183 VYSYAVKLGIASVNC-VGNSLISMYA-------------------------------RSG 210
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+E A + FD + ++ +S+ A+++G+ K EEA F E+ +G+ T S+L+
Sbjct: 211 RMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLS 270
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
A++G +G G IH +LK +K N +CN LI +YSRCG IE A QVF M R ++S
Sbjct: 271 GAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 330
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W S+I GFA +GF ALE F+ M + G KP+ +++ L+ACSH G+I +G ++F+ M
Sbjct: 331 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 390
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
K + + PR+EHY C+VDL R+G L +A+ + +MP+ + +V +LL ACR G+ L
Sbjct: 391 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG 450
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
+ +++ +P + Y+LL+N++A+ G+W KIR++MK R + K+ G S IE+ +
Sbjct: 451 RHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENR 510
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F G+ SH ++ IY L+ L+ +K GY+P+T
Sbjct: 511 VHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDT 547
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 39/337 (11%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT I+R + G +A F M L G P+ T+ ++LS C + L LG +H
Sbjct: 22 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG--LLALGKQLH 79
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKF---GRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
V +LGL + V VG +L+DMYAK G +D + VF+ M + +W A+I Y +
Sbjct: 80 SRVIRLGLALD-VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQS 138
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G+ + +EA+E F +M + P++ + SVL
Sbjct: 139 GECD------------------------------KEAIELFCKMISGHIRPNHFSFSSVL 168
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC N+ G ++ Y +K V N+LI +Y+R G +E AR+ F + ++ LV
Sbjct: 169 KACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLV 228
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDI 341
S+N+I+ G+A N EA FN + G +F L+ + G + G + + +
Sbjct: 229 SYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL 288
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+K Y+ + I ++ +YSR G +E A V M
Sbjct: 289 LKGGYKSNQCI--CNALISMYSRCGNIEAAFQVFNEM 323
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 159/327 (48%), Gaps = 52/327 (15%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++FD+MP R+ ++WT ++ F + G +A++ F +M++SG PD T SVL+AC
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC---GCIEFARQVFQRMHKRTLVSW 284
+G L +G +H V++ +V V +L+D+Y++C G ++ +R+VF++M + ++SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 285 NSIIVGFAVNGFVG-EALEYFNSMQKEGFKPDGVSFTGALTAC----------------- 326
+II +A +G EA+E F M +P+ SF+ L AC
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 327 ------------------SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
+ +G +ED + FDI+ + VS Y IVD Y++ +
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVS-----YNAIVDGYAKNLKS 243
Query: 369 EDA---LNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL-- 423
E+A N + + + + SLL+ + G + E++ L L G SN +
Sbjct: 244 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL--LKGGYKSNQCICN 301
Query: 424 -LANMYAAVGKWDGAGKIRRTMKGRGI 449
L +MY+ G + A ++ M+ R +
Sbjct: 302 ALISMYSRCGNIEAAFQVFNEMEDRNV 328
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/459 (34%), Positives = 271/459 (59%), Gaps = 24/459 (5%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V W + I+ + R+ EA F RM + I++ T+++G + +
Sbjct: 192 VSWNTVITAFMQRRRVDEAQELFNRMP----ERDVISWTTMVAGLSK------------N 235
Query: 106 GLV--CKLGLDR---NNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYM 160
G + +L D+ NV+ ++ YA+ R+D A +F+ M + +WN MI G++
Sbjct: 236 GRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFI 295
Query: 161 RRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISG-VEPDYVTII 219
+ G +E AV F +M ++ ++WTA+++G V+ G EEAL+ F EMQ + V+P+ T +
Sbjct: 296 QNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFV 355
Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQ--RMH 277
SVL AC+ + L G IH+ + K +++ V + LI++YS+CG +E AR++F +
Sbjct: 356 SVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIG 415
Query: 278 KRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR 337
R +VSWN +I +A +G +A+ F+ MQ GF+PD V++ L+ACSHAGL+++GL+
Sbjct: 416 HRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLK 475
Query: 338 YFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTK 397
F+ + + + R +H+ C+VDL+ RAGRL++A + ++ + +KP+ V +LLA C
Sbjct: 476 LFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVH 535
Query: 398 GDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSS 457
G I L + + L++ +P Y++L+N+YA+ GKW A +R MK +G++K+PG S
Sbjct: 536 GHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSW 595
Query: 458 IEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGY 496
IE+G+ +H F+ GD SH E E+IY +L L +K G+
Sbjct: 596 IEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGH 634
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 161/342 (47%), Gaps = 59/342 (17%)
Query: 109 CKLGLDRN----NVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
K DRN NV+ TAL+ Y ++ R++ A +FDAM VK+ +WN MI+GY R+G
Sbjct: 116 AKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGW 175
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
I+ A+ +F+ MP R+ +SW ++ F++R +EA E F M E D ++
Sbjct: 176 IDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMP----ERDVIS------- 224
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSW 284
W T++ S+ G I+ AR +F +M R +VSW
Sbjct: 225 -----------W-----------------TTMVAGLSKNGRIDDARLLFDKMPVRNVVSW 256
Query: 285 NSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKK 344
N++I+G+A N + EA + F M + S+ +T G +E + +F
Sbjct: 257 NTMIIGYAQNMRLDEAFKLFEQMPERELS----SWNTMITGFIQNGKLERAVDFF----- 307
Query: 345 IYRVSPR-IEHYGCIVDLYSRAGRLEDALNVVENMP----MKPNEVVLGSLLAACRTKGD 399
Y++S + + + ++ + + GR E+AL + M +KPNE S+L AC
Sbjct: 308 -YKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAA 366
Query: 400 IILAERLMKYLVD-LDPGVDSNYVLLANMYAAVGKWDGAGKI 440
+ +++ + + + V L NMY+ G+ + A KI
Sbjct: 367 LCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKI 408
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 113/230 (49%), Gaps = 18/230 (7%)
Query: 153 NAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF-REMQISGV 211
N +I + G I A ++F+EMP RD +SWTA++ G++K G EEA F R I V
Sbjct: 70 NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNV 129
Query: 212 EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQ 271
VT ++++ + R + NV NT+I+ Y+R G I+ A
Sbjct: 130 ----VTWTALVSGYVRWNRIEEA----RRLFDAMPVKNVISWNTMIEGYARKGWIDQALD 181
Query: 272 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGL 331
+F+ M +R +VSWN++I F V EA E FN M + D +S+T + S G
Sbjct: 182 LFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPER----DVISWTTMVAGLSKNGR 237
Query: 332 IEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
I+D FD M VS + ++ Y++ RL++A + E MP +
Sbjct: 238 IDDARLLFDKMPVRNVVS-----WNTMIIGYAQNMRLDEAFKLFEQMPER 282
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 11/173 (6%)
Query: 244 QDFKDNVKVC--NTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 301
+DF N V N LI + G I ARQVF+ M R +VSW ++I G+ G + EA
Sbjct: 58 RDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAK 117
Query: 302 EYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
F+ + + K + V++T ++ IE+ R FD M +S + +++
Sbjct: 118 TLFD--RNDAIK-NVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVIS-----WNTMIEG 169
Query: 362 YSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLD 414
Y+R G ++ AL++ E MP + N V +++ A + + A+ L + + D
Sbjct: 170 YARKGWIDQALDLFEXMPER-NVVSWNTVITAFMQRRRVDEAQELFNRMPERD 221
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/438 (36%), Positives = 249/438 (56%), Gaps = 35/438 (7%)
Query: 63 EAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGT 122
EAA F RM G P+ TF++LL CA ++ G HG+ K+G + ++ T
Sbjct: 125 EAARVFVRMLEEGVAPDTYTFVSLLKACA--AARAGEEGRQAHGVAVKVGAAEHEYVLPT 182
Query: 123 ALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAIS 182
L++MYA+ G D +A MF + +S
Sbjct: 183 -LINMYAECG-------------------------------DARAARTMFGRVDGECVVS 210
Query: 183 WTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVL 242
+ A++ V+ EAL FREMQ G++ VT+ISVL+ACA +G L +G WIH YV
Sbjct: 211 YNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVR 270
Query: 243 KQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE 302
K VKV LID+Y +CG +E A VFQ M R +W+ +IV +A + + EA+
Sbjct: 271 KVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAIS 330
Query: 303 YFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLY 362
F M+K+G KPD V+F G L ACSH+GL+ +GL+YFD M++ + + P I+HYGC+ DL
Sbjct: 331 LFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMRE-FGLVPGIKHYGCVADLL 389
Query: 363 SRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYV 422
+R+G+L+ A ++ +P+KP ++ +LL+AC ++GD L +++ + +++LD +YV
Sbjct: 390 ARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGDADLGKQVFERILELDDSHGGDYV 449
Query: 423 LLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS 482
+ +N+ A G+W+ ++R+ M +G+ K PG SSIE+ + +HEF AGD H +S
Sbjct: 450 IFSNLCANTGRWEEMNRVRKLMNEKGVVKVPGCSSIEVDNRVHEFFAGDGRHPKSLDARR 509
Query: 483 MLELLSFDLKLCGYVPET 500
M++ + LKL GYVP T
Sbjct: 510 MVDGVIEQLKLAGYVPNT 527
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 9/229 (3%)
Query: 158 GYMRRGDIESAVRMFDEMPVRDAISW-TALLNGFVK-------RGYFEEALECFREMQIS 209
G + + A ++FD +P + W LL G+ + R EEA F M
Sbjct: 77 GAAKPAQLSYARQVFDRIPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEE 136
Query: 210 GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
GV PD T +S+L ACA G H +K ++ V TLI++Y+ CG A
Sbjct: 137 GVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAA 196
Query: 270 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHA 329
R +F R+ +VS+N++I + GEAL F MQ +G K V+ L+AC+
Sbjct: 197 RTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALL 256
Query: 330 GLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
G +E G + ++K+ ++ ++ ++D+Y + G LEDA++V + M
Sbjct: 257 GALELGRWIHEYVRKV-QLDSLVKVNTALIDMYGKCGSLEDAISVFQGM 304
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 45 TVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMI 104
V + + I+ RS R EA + F M G +T I++LS CA + L LG I
Sbjct: 208 VVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGA--LELGRWI 265
Query: 105 HGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGD 164
H V K+ LD + V V TAL+DMY K G ++ A VF M + W+ MI Y
Sbjct: 266 HEYVRKVQLD-SLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAY----- 319
Query: 165 IESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNA 224
Y EA+ F EM+ G++PD VT + VL A
Sbjct: 320 --------------------------ANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYA 353
Query: 225 CANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMH-KRTLVS 283
C++ G + GL + + +K + DL +R G ++ A + + K T +
Sbjct: 354 CSHSGLVSEGLQYFDSMREFGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPTAIL 413
Query: 284 WNSIIVGFAVNG 295
W +++ G
Sbjct: 414 WRTLLSACGSRG 425
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/462 (35%), Positives = 261/462 (56%), Gaps = 10/462 (2%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
NP + WT+ I + G+ EA + M P TF LL C L LG
Sbjct: 114 NPFL-WTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGD--LNLGR 170
Query: 103 MIHGLVCKL-GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
H +L G V VG ++DMY K G + A VFD M + +W +I Y R
Sbjct: 171 QFHAQTFRLRGF--CFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYAR 228
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++ESA +F+ +P +D ++WTA++ GF + +EALE F M+ SG+ D VT+
Sbjct: 229 VGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 288
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFK--DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
++ACA +G + K + D+V + + LID+YS+CG +E A VF M+ +
Sbjct: 289 ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNK 348
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ S++S+I+G A +G EAL+ F+ M + KP+ V+F GALTACSH+GL++ G +
Sbjct: 349 NVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQV 408
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
F M + + V P +HY C+VDL RAGRL++AL +++ M ++P+ V G+LL ACR
Sbjct: 409 FASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHN 468
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
+ +AE ++L +L+P + NY+LL+N+Y++ G W G +R+ +K +G++K P +S +
Sbjct: 469 NPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWV 528
Query: 459 EIGSG-IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+G +H+F G+ +H S+ I LE L L GY P+
Sbjct: 529 VDKNGQMHKFFPGNLNHPMSKKIQDKLEELVERLTALGYQPD 570
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 149/340 (43%), Gaps = 63/340 (18%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IHG V + GLD++ ++ T L+ K G +D Y RR
Sbjct: 69 IHGHVLRKGLDQSCYIL-TKLIRTLTKLG---------------------VPMDPYPRR- 105
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+ + + R+ WTA++ G+ G F+EA+ + M+ + P T ++L
Sbjct: 106 -------VIEPVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLK 158
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
AC ++G L +G H + V V NT+ID+Y +CG I AR+VF M +R ++S
Sbjct: 159 ACGSMGDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVIS 218
Query: 284 WNSII-------------------------------VGFAVNGFVGEALEYFNSMQKEGF 312
W +I GFA N EALEYF+ M+K G
Sbjct: 219 WTELIAAYARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI 278
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI-YRVSPRIEHYGCIVDLYSRAGRLEDA 371
+ D V+ G ++AC+ G + R I +K Y S + ++D+YS+ G +E+A
Sbjct: 279 RADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEA 338
Query: 372 LNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
+NV +M K N S++ T G A L Y+V
Sbjct: 339 VNVFVSMNNK-NVFSYSSMILGLATHGRAQEALDLFHYMV 377
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/475 (34%), Positives = 260/475 (54%), Gaps = 46/475 (9%)
Query: 59 GRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLG-LDRNN 117
GR+A+A F R+ P+ +++ TLLS C F G + +
Sbjct: 63 GRLADARHLFDRIP----TPDAVSYNTLLS--------CHFASGDADGARRLFASMPVRD 110
Query: 118 VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDG------------------- 158
V+ ++ +K G ++ A VF AM V++S +WNAM+ G
Sbjct: 111 VVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPE 170
Query: 159 -------------YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFRE 205
YM G++ A+ F+ MPVR+ +SW A++ G+VK + ++AL FR
Sbjct: 171 KGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRT 230
Query: 206 M-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCG 264
M + + V+P+ T+ SVL C+N+ LG G IH++ +K N+ V +L+ +Y +CG
Sbjct: 231 MVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCG 290
Query: 265 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALT 324
+ A ++F MH R +V+WN++I G+A +G EA+ F M+ EG +P+ ++F LT
Sbjct: 291 DLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLT 350
Query: 325 ACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNE 384
AC H GL + G+R F+ M+++Y + PR++HY C+VDL RAG+LE A++++ +MP +P+
Sbjct: 351 ACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHP 410
Query: 385 VVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTM 444
G+LLAACR ++ AE L++ DP YV LAN+YA +WD ++RR M
Sbjct: 411 SAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWM 470
Query: 445 KGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
K + K PG S IEI +HEF + DR H + I+ L L+ +K GYVP+
Sbjct: 471 KDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPD 525
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 128/298 (42%), Gaps = 26/298 (8%)
Query: 160 MRRGDIESAVRMFDEMPVRDAISWTALLNGFVKR-GYFEEALECFREMQISGVEPDYVTI 218
+RRGD+ A F P + ++ LL G+ + G +A F + PD V+
Sbjct: 28 VRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPT----PDAVSY 83
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
++L +C G R +D V NT++ S+ G +E A+ VF M
Sbjct: 84 NTLL-SCHFASGDADG--ARRLFASMPVRDVVSW-NTMVSGLSKSGAVEEAKAVFLAMPV 139
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R VSWN+++ GFA + + A E+F + ++G D V +T ++ G + + Y
Sbjct: 140 RNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEY 196
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM----PMKPNEVVLGSLLAAC 394
F+ M VS + +V Y + +DAL + M ++PN L S+L C
Sbjct: 197 FEAMPVRNLVS-----WNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGC 251
Query: 395 RTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGI 449
+ +++ ++ + L + N + L +MY G A K+ M R +
Sbjct: 252 SNLSALGFGKQIHQWCMKLP--LSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDV 307
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/464 (34%), Positives = 263/464 (56%), Gaps = 35/464 (7%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V + + I+ + +SG +A M P+ T ++L +++ + G IH
Sbjct: 208 VSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD--VIKGKEIH 265
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
G V + G+D ++V +G++L+DMYAK R I
Sbjct: 266 GYVIRKGID-SDVYIGSSLVDMYAKSAR-------------------------------I 293
Query: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
E + R+F + RD ISW +L+ G+V+ G + EAL FR+M + V+P V SV+ AC
Sbjct: 294 EDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPAC 353
Query: 226 ANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWN 285
A++ TL +G +H YVL+ F N+ + + L+D+YS+CG I+ AR++F RM+ VSW
Sbjct: 354 AHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWT 413
Query: 286 SIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI 345
+II+G A++G EA+ F M+++G KP+ V+F LTACSH GL+++ YF+ M K+
Sbjct: 414 AIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKV 473
Query: 346 YRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAER 405
Y ++ +EHY + DL RAG+LE+A N + M ++P V +LL++C ++ LAE+
Sbjct: 474 YGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEK 533
Query: 406 LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIH 465
+ + + +D YVL+ NMYA+ G+W K+R M+ +G++KKP S IE+ + H
Sbjct: 534 VAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTH 593
Query: 466 EFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
F++GDRSH + I L+ + ++ GYV +T +G L++ D
Sbjct: 594 GFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADT-SGVLHDVD 636
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 169/340 (49%), Gaps = 9/340 (2%)
Query: 44 PTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
P + W S I ++A F M G P+H F ++L C L G
Sbjct: 69 PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMD--LRFGES 126
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKF---GRMDLATVVFDAM--RVKSSFTWNAMIDG 158
+HG + +LG+D ++ G AL++MYAK G VFD M R +S + +
Sbjct: 127 VHGFIVRLGMD-CDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 159 YMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTI 218
+ I+S R+F+ MP +D +S+ ++ G+ + G +E+AL REM + ++PD T+
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 219 ISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHK 278
SVL + + G IH YV+++ +V + ++L+D+Y++ IE + +VF R++
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 279 RTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
R +SWNS++ G+ NG EAL F M KP V+F+ + AC+H + G +
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+ + I +VD+YS+ G ++ A + + M
Sbjct: 366 HGYVLR-GGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 148/367 (40%), Gaps = 79/367 (21%)
Query: 172 FDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTL 231
F + ++W +++ F + F +AL F EM+ SG PD+ SVL +C + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 232 GIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC---------------------------- 263
G +H ++++ ++ N L+++Y++
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 264 ---GC-----IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPD 315
C I+ R+VF+ M ++ +VS+N+II G+A +G +AL M KPD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 316 GVSFTGALTACS-----------HAGLIEDGLRYFDI-----MKKIYRVSPRIE------ 353
+ + L S H +I G+ D+ + +Y S RIE
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDS-DVYIGSSLVDMYAKSARIEDSERVF 300
Query: 354 ---------HYGCIVDLYSRAGRLEDALNVVENM---PMKPNEVVLGSLLAACRTKGDII 401
+ +V Y + GR +AL + M +KP V S++ AC +
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 402 LAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
L ++L Y+ L G SN + L +MY+ G A KI M + + ++I
Sbjct: 361 LGKQLHGYV--LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM---NVLDEVSWTAI 415
Query: 459 EIGSGIH 465
+G +H
Sbjct: 416 IMGHALH 422
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/462 (35%), Positives = 259/462 (56%), Gaps = 10/462 (2%)
Query: 43 NPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGA 102
NP + WT+ I + G+ EA + M P TF LL C L LG
Sbjct: 113 NPFL-WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKD--LNLGR 169
Query: 103 MIHGLVCKL-GLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMR 161
H +L G V VG ++DMY K +D A VFD M + +W +I Y R
Sbjct: 170 QFHAQTFRLRGF--CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 162 RGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISV 221
G++E A +F+ +P +D ++WTA++ GF + +EALE F M+ SG+ D VT+
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 222 LNACANVGTLGIGLWIHRYVLKQDFK--DNVKVCNTLIDLYSRCGCIEFARQVFQRMHKR 279
++ACA +G + K + D+V + + LID+YS+CG +E A VF M+ +
Sbjct: 288 ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK 347
Query: 280 TLVSWNSIIVGFAVNGFVGEALEYFNSM-QKEGFKPDGVSFTGALTACSHAGLIEDGLRY 338
+ +++S+I+G A +G EAL F+ M + KP+ V+F GAL ACSH+GL++ G +
Sbjct: 348 NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Query: 339 FDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG 398
FD M + + V P +HY C+VDL R GRL++AL +++ M ++P+ V G+LL ACR
Sbjct: 408 FDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHN 467
Query: 399 DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSI 458
+ +AE ++L +L+P + NY+LL+N+YA+ G W G ++R+ +K +G++K P +S +
Sbjct: 468 NPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV 527
Query: 459 EIGSG-IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPE 499
+G +H+F G+ +H S I LE L L + GY P+
Sbjct: 528 VDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPD 569
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 147/340 (43%), Gaps = 63/340 (18%)
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
IHG V + GLD++ ++ T L+ K G +D Y RR
Sbjct: 68 IHGHVLRKGLDQSCYIL-TKLIRTLTKLG---------------------VPMDPYARR- 104
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+ + + R+ WTA++ G+ G F+EA+ + M+ + P T ++L
Sbjct: 105 -------VIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLK 157
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
AC + L +G H + V V NT+ID+Y +C I+ AR+VF M +R ++S
Sbjct: 158 ACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVIS 217
Query: 284 WNSII-------------------------------VGFAVNGFVGEALEYFNSMQKEGF 312
W +I GFA N EALEYF+ M+K G
Sbjct: 218 WTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI 277
Query: 313 KPDGVSFTGALTACSHAGLIEDGLRYFDIMKKI-YRVSPRIEHYGCIVDLYSRAGRLEDA 371
+ D V+ G ++AC+ G + R I +K Y S + ++D+YS+ G +E+A
Sbjct: 278 RADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEA 337
Query: 372 LNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLV 411
+NV +M K N S++ T G A L Y+V
Sbjct: 338 VNVFMSMNNK-NVFTYSSMILGLATHGRAQEALHLFHYMV 376
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 217 TIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCI--EFARQVFQ 274
++IS L+ C N+ + IH +VL++ + + LI ++ G +AR+V +
Sbjct: 51 SLISKLDDCINLNQIK---QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 275 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIED 334
+ R W ++I G+A+ G EA+ + M+KE P +F+ L AC G ++D
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKAC---GTMKD 164
Query: 335 GLRYFDIMKKIYRVSPRIEHY------GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLG 388
++ ++ + + R+ + ++D+Y + ++ A V + MP + + +
Sbjct: 165 ----LNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPER-DVISWT 219
Query: 389 SLLAACRTKGDIILAERLMKYLVDLD 414
L+AA G++ A L + L D
Sbjct: 220 ELIAAYARVGNMECAAELFESLPTKD 245
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/457 (34%), Positives = 254/457 (55%), Gaps = 35/457 (7%)
Query: 45 TVQWTSSISRHCRSGRIAEAALE-FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAM 103
+ WT+ I+ + +SG + A+E F +M PNH +F ++L C + + G
Sbjct: 120 VMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP--YTGEQ 177
Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRG 163
++ KLG+ N VG +L+ MYA R G
Sbjct: 178 VYSYAVKLGIASVNC-VGNSLISMYA-------------------------------RSG 205
Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLN 223
+E A + FD + ++ +S+ A+++G+ K EEA F E+ +G+ T S+L+
Sbjct: 206 RMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLS 265
Query: 224 ACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVS 283
A++G +G G IH +LK +K N +CN LI +YSRCG IE A QVF M R ++S
Sbjct: 266 GAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 325
Query: 284 WNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMK 343
W S+I GFA +GF ALE F+ M + G KP+ +++ L+ACSH G+I +G ++F+ M
Sbjct: 326 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 385
Query: 344 KIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILA 403
K + + PR+EHY C+VDL R+G L +A+ + +MP+ + +V +LL ACR G+ L
Sbjct: 386 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG 445
Query: 404 ERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSG 463
+ +++ +P + Y+LL+N++A+ G+W KIR++MK R + K+ G S IE+ +
Sbjct: 446 RHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENR 505
Query: 464 IHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPET 500
+H F G+ SH ++ IY L+ L+ +K GY+P+T
Sbjct: 506 VHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDT 542
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 39/337 (11%)
Query: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
V WT I+R + G +A F M L G P+ T+ ++LS C + L LG +H
Sbjct: 17 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG--LLALGKQLH 74
Query: 106 GLVCKLGLDRNNVMVGTALLDMYAKF---GRMDLATVVFDAMRVKSSFTWNAMIDGYMRR 162
V +LGL + V VG +L+DMYAK G +D + VF+ M + +W A+I Y +
Sbjct: 75 SRVIRLGLALD-VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQS 133
Query: 163 GDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVL 222
G+ + +EA+E F +M + P++ + SVL
Sbjct: 134 GECD------------------------------KEAIELFCKMISGHIRPNHFSFSSVL 163
Query: 223 NACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLV 282
AC N+ G ++ Y +K V N+LI +Y+R G +E AR+ F + ++ LV
Sbjct: 164 KACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLV 223
Query: 283 SWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLR-YFDI 341
S+N+I+ G+A N EA FN + G +F L+ + G + G + + +
Sbjct: 224 SYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL 283
Query: 342 MKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
+K Y+ + I ++ +YSR G +E A V M
Sbjct: 284 LKGGYKSNQCI--CNALISMYSRCGNIEAAFQVFNEM 318
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 159/327 (48%), Gaps = 52/327 (15%)
Query: 168 AVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACAN 227
A ++FD+MP R+ ++WT ++ F + G +A++ F +M++SG PD T SVL+AC
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 228 VGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRC---GCIEFARQVFQRMHKRTLVSW 284
+G L +G +H V++ +V V +L+D+Y++C G ++ +R+VF++M + ++SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 285 NSIIVGFAVNGFVG-EALEYFNSMQKEGFKPDGVSFTGALTAC----------------- 326
+II +A +G EA+E F M +P+ SF+ L AC
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 327 ------------------SHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRL 368
+ +G +ED + FDI+ + VS Y IVD Y++ +
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVS-----YNAIVDGYAKNLKS 238
Query: 369 EDA---LNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL-- 423
E+A N + + + + SLL+ + G + E++ L L G SN +
Sbjct: 239 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL--LKGGYKSNQCICN 296
Query: 424 -LANMYAAVGKWDGAGKIRRTMKGRGI 449
L +MY+ G + A ++ M+ R +
Sbjct: 297 ALISMYSRCGNIEAAFQVFNEMEDRNV 323
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,974,683,534
Number of Sequences: 23463169
Number of extensions: 333683872
Number of successful extensions: 926592
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9218
Number of HSP's successfully gapped in prelim test: 2726
Number of HSP's that attempted gapping in prelim test: 745909
Number of HSP's gapped (non-prelim): 63353
length of query: 509
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 362
effective length of database: 8,910,109,524
effective search space: 3225459647688
effective search space used: 3225459647688
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)