Query 010500
Match_columns 509
No_of_seqs 254 out of 1620
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 01:15:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010500.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010500hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK11756 exonuclease III; Prov 100.0 2E-27 4.4E-32 238.0 18.4 234 224-468 12-268 (268)
2 COG3568 ElsH Metal-dependent h 99.9 1.6E-26 3.6E-31 228.2 20.0 217 222-469 25-258 (259)
3 PRK05421 hypothetical protein; 99.9 4.4E-24 9.4E-29 214.1 21.7 209 214-470 47-263 (263)
4 COG0708 XthA Exonuclease III [ 99.9 5E-25 1.1E-29 218.1 12.9 228 224-468 12-261 (261)
5 TIGR00195 exoDNase_III exodeox 99.9 1.4E-22 3.1E-27 201.3 18.8 232 215-466 5-254 (254)
6 TIGR03395 sphingomy sphingomye 99.9 2.3E-22 5.1E-27 203.8 19.7 139 224-364 22-193 (283)
7 TIGR00633 xth exodeoxyribonucl 99.9 1.9E-22 4.1E-27 199.1 18.2 235 215-467 5-255 (255)
8 PRK13911 exodeoxyribonuclease 99.9 7.7E-22 1.7E-26 196.7 19.0 229 215-466 5-249 (250)
9 PTZ00297 pantothenate kinase; 99.9 2.2E-20 4.8E-25 222.1 23.8 249 226-502 29-340 (1452)
10 PLN03144 Carbon catabolite rep 99.8 6.7E-19 1.5E-23 193.0 19.7 141 221-364 281-471 (606)
11 KOG3873 Sphingomyelinase famil 99.8 7.3E-20 1.6E-24 184.9 9.2 221 216-470 19-294 (422)
12 KOG2756 Predicted Mg2+-depende 99.8 4.5E-18 9.8E-23 166.1 11.2 223 212-467 101-348 (349)
13 PRK15251 cytolethal distending 99.7 1.2E-16 2.7E-21 159.3 16.2 193 229-464 46-268 (271)
14 PF03372 Exo_endo_phos: Endonu 99.7 2.6E-16 5.6E-21 150.2 8.7 136 226-364 17-172 (249)
15 COG3021 Uncharacterized protei 99.6 7.8E-15 1.7E-19 148.0 12.9 206 222-469 98-308 (309)
16 KOG2338 Transcriptional effect 99.5 6.3E-13 1.4E-17 140.4 17.4 139 224-364 148-308 (495)
17 smart00476 DNaseIc deoxyribonu 99.4 8E-12 1.7E-16 126.3 18.8 130 226-362 38-190 (276)
18 smart00128 IPPc Inositol polyp 99.4 1.4E-11 3.1E-16 126.7 19.8 240 227-470 20-306 (310)
19 COG5239 CCR4 mRNA deadenylase, 99.1 3E-10 6.6E-15 116.0 10.5 230 224-470 59-367 (378)
20 KOG0620 Glucose-repressible al 99.0 9.9E-10 2.2E-14 114.9 8.8 141 218-364 43-237 (361)
21 COG2374 Predicted extracellula 98.7 1E-07 2.2E-12 105.3 13.9 218 221-470 498-790 (798)
22 PF14529 Exo_endo_phos_2: Endo 98.6 2.3E-07 4.9E-12 80.7 9.4 116 319-463 1-119 (119)
23 KOG0566 Inositol-1,4,5-triphos 98.5 1.6E-06 3.5E-11 97.6 16.2 158 301-469 658-832 (1080)
24 PLN03191 Type I inositol-1,4,5 98.4 8.5E-06 1.9E-10 89.3 15.6 177 302-496 406-611 (621)
25 COG5411 Phosphatidylinositol 5 98.0 2.7E-05 5.9E-10 82.0 9.0 157 303-470 152-328 (460)
26 KOG1294 Apurinic/apyrimidinic 97.9 0.00011 2.3E-09 76.4 12.0 220 233-468 85-335 (335)
27 PTZ00312 inositol-1,4,5-tripho 92.8 0.35 7.7E-06 49.4 7.5 63 301-364 65-144 (356)
28 KOG1976 Inositol polyphosphate 91.3 0.5 1.1E-05 48.3 6.5 61 303-364 156-233 (391)
29 KOG0565 Inositol polyphosphate 65.5 19 0.00041 32.7 6.4 60 304-364 47-124 (145)
No 1
>PRK11756 exonuclease III; Provisional
Probab=99.95 E-value=2e-27 Score=238.02 Aligned_cols=234 Identities=15% Similarity=0.115 Sum_probs=156.4
Q ss_pred cccHHHHHHHHHccCCcEEEEcCccCCcccCCChHHHHHHHhCCcEEEeccCCCCceeEEEEeccceeeeEeeecC--CC
Q 010500 224 VGSTRTVLEVLRELDADLLALQDVKAEEENSMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRWKVQKIFD--DT 301 (509)
Q Consensus 224 ~~r~~~I~e~I~e~dpDVI~LQEV~~~~~~~~~~l~~La~~lG~~~~f~~s~~g~~GvAILSR~PI~~~~~~~l~~--~~ 301 (509)
..+.+++.++|++.+||||||||++...... . .++...+||++++.. ..+.+|+|||||+|+..... .++. ..
T Consensus 12 ~~~~~~i~~~i~~~~pDIi~LQE~~~~~~~~--~-~~~~~~~gy~~~~~~-~~~~~GvailSr~p~~~~~~-~~~~~~~~ 86 (268)
T PRK11756 12 RARPHQLEAIIEKHQPDVIGLQETKVHDEMF--P-LEEVEALGYHVFYHG-QKGHYGVALLSKQTPIAVRK-GFPTDDEE 86 (268)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecccccccC--C-HHHHHhcCCEEEEeC-CCCCCEEEEEECCChHHeEE-CCCCcccc
Confidence 4467889999999999999999997543221 1 233446788776643 45789999999999876543 2322 23
Q ss_pred CCceEEEEEEEeCCccEEEEEEecCCCCC---h----HHHHHHHHHHHHHc----CCCCcEEEEecCCCCCCCCCcc-hh
Q 010500 302 DFRNVLKATVDVPQIGEVNFHCTHLDHLD---E----NWRMKQMNAIIQSN----DHGEAHILAGALNSLDETDYSS-ER 369 (509)
Q Consensus 302 ~~R~~L~a~l~~~g~~~L~VintHL~~~~---~----~~R~~Q~~~L~~~L----~~~~PvIL~GDFNs~p~s~~~~-~~ 369 (509)
+.+.++.+.+..++ +.+.|+|+|++... . ..|.++++.|.+++ +.+.|+|+|||||+.+.+.+.. +.
T Consensus 87 ~~~r~l~~~i~~~~-g~~~v~n~y~P~~~~~~~~~~~~~r~~~~~~l~~~l~~~~~~~~pvIl~GDfN~~~~~~D~~~~~ 165 (268)
T PRK11756 87 AQRRIIMATIPTPN-GNLTVINGYFPQGESRDHPTKFPAKRQFYQDLQNYLETELSPDNPLLIMGDMNISPTDLDIGIGE 165 (268)
T ss_pred ccCCEEEEEEEcCC-CCEEEEEEEecCCCCCCcchhHHHHHHHHHHHHHHHHHHhccCCCEEEEeecccCCChhhcCCcc
Confidence 46789999999887 55999999997521 1 24566777776655 3567999999999998754211 00
Q ss_pred hhhHHHh--hhhcCCCChhHHHHHHHhhCCceecccccCCC-c-ceeE-ecCCccccCCCCCCCceEEEEeCCCCCCcee
Q 010500 370 WTDIVKY--YEEMGKPTPKVEVMKFLKSKQYTDSKDFAGEC-E-SVVM-IAKGQSVQGTCKYGTRVDYILASPNSPYKFV 444 (509)
Q Consensus 370 ~~~i~~~--~~~~G~~~~~~~~~~~L~~~glvDa~~~~~~~-~-~tT~-~~~g~~~~~t~~~~~RIDyIf~S~~~~~kl~ 444 (509)
++. ... ....+...++++..+.|.+.+|+|+|+..++. . .+|| .+.+.. ...+.+.||||||+++.... .
T Consensus 166 ~~~-~~~~~~~~~~~~~~er~~~~~l~~~~l~D~~R~~~p~~~~~~T~~~~~~~~--~~~~~g~RIDyi~~s~~~~~--~ 240 (268)
T PRK11756 166 ENR-KRWLRTGKCSFLPEEREWLDRLMDWGLVDTFRQLNPDVNDRFSWFDYRSKG--FDDNRGLRIDLILATQPLAE--R 240 (268)
T ss_pred cCh-HHhcccCCccCCHHHHHHHHHHHhCCcEeehhhhCCCCCCcccCcCCcccc--cccCCceEEEEEEeCHHHHh--h
Confidence 110 010 11123444555677777778999999999875 2 2454 443321 11246899999999987421 2
Q ss_pred eeEEEEcCC----CCCCCccceEEEEEe
Q 010500 445 PGSYSVFSS----KGTSDHHIVKVDITK 468 (509)
Q Consensus 445 v~s~~Vi~~----~~~SDH~PV~adf~L 468 (509)
+..+.+..+ .++|||+||+++|.+
T Consensus 241 v~~~~i~~~~~~~~~~SDH~PV~~~~~~ 268 (268)
T PRK11756 241 CVETGIDYDIRGMEKPSDHAPIWATFKL 268 (268)
T ss_pred heEeEEeHHHhCCCCCCCcccEEEEEeC
Confidence 567776532 247999999999975
No 2
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only]
Probab=99.95 E-value=1.6e-26 Score=228.19 Aligned_cols=217 Identities=21% Similarity=0.208 Sum_probs=156.0
Q ss_pred CCcccHHHHHHHHHccCCcEEEEcCccCCcc----cCCChHHHHHHHhCCcEEEec-c-----CCCCceeEEEEecccee
Q 010500 222 ASVGSTRTVLEVLRELDADLLALQDVKAEEE----NSMKPLSDLAAALGMNYVFAE-S-----WAPEYGNAVLSKWPIKR 291 (509)
Q Consensus 222 ~~~~r~~~I~e~I~e~dpDVI~LQEV~~~~~----~~~~~l~~La~~lG~~~~f~~-s-----~~g~~GvAILSR~PI~~ 291 (509)
++..+++++++.|++.++|||||||+..... ...++...+...++.++.+.. . ..+.+|++|||++|+..
T Consensus 25 d~r~~~~r~~~~i~~~~~Div~LQEv~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~GnaiLS~~pi~~ 104 (259)
T COG3568 25 DRRFDLPRIAEVIREVGADIVALQEVDGAFGRHRDGLLDLPHLLGRLGLAPYWWSGAAFGAVYGEGQHGNAILSRLPIRD 104 (259)
T ss_pred CceecHHHHHHHHHhhccCeeeeecccccccccccccchhHHHHHHhcCCccccchhhhhhhcccceeeeEEEecCcccc
Confidence 6788999999999999999999999986432 122333445555554433221 1 23678999999999999
Q ss_pred eeEeeecC--CCCCceEEEEEEEeCCccEEEEEEecCCCCChHHHHHHHHHHHHHc--CCCCcEEEEecCCCCCCCCCcc
Q 010500 292 WKVQKIFD--DTDFRNVLKATVDVPQIGEVNFHCTHLDHLDENWRMKQMNAIIQSN--DHGEAHILAGALNSLDETDYSS 367 (509)
Q Consensus 292 ~~~~~l~~--~~~~R~~L~a~l~~~g~~~L~VintHL~~~~~~~R~~Q~~~L~~~L--~~~~PvIL~GDFNs~p~s~~~~ 367 (509)
...+.++. +.++|++++++++.++|++|.|+|+||+ ..+..|..|++.|++.+ ....|+|+|||||+.+++.+
T Consensus 105 v~~~~lp~~~~~~~Rgal~a~~~~~~g~~l~V~~~HL~-l~~~~R~~Q~~~L~~~~~l~~~~p~vl~GDFN~~p~s~~-- 181 (259)
T COG3568 105 VENLALPDPTGLEPRGALLAEIELPGGKPLRVINAHLG-LSEESRLRQAAALLALAGLPALNPTVLMGDFNNEPGSAE-- 181 (259)
T ss_pred hhhccCCCCCCCCCceeEEEEEEcCCCCEEEEEEEecc-ccHHHHHHHHHHHHhhccCcccCceEEEccCCCCCCCcc--
Confidence 88888885 5679999999999986579999999999 88999999999999953 44459999999999999862
Q ss_pred hhhhhHHHhhhhcCCCChhHHHHHHHhhCCceecccccCCCcceeEecCCccccCCCCCCCceEEEEeCCCCCCceeeeE
Q 010500 368 ERWTDIVKYYEEMGKPTPKVEVMKFLKSKQYTDSKDFAGECESVVMIAKGQSVQGTCKYGTRVDYILASPNSPYKFVPGS 447 (509)
Q Consensus 368 ~~~~~i~~~~~~~G~~~~~~~~~~~L~~~glvDa~~~~~~~~~tT~~~~g~~~~~t~~~~~RIDyIf~S~~~~~kl~v~s 447 (509)
|... ..+. ... ...+.+++.-+++..--+| +...+..+|||||+++. +.+.+
T Consensus 182 --yr~~-------~~~~-----~~~--~~~~~~~~~~a~~~~~~tf--------ps~~p~lriD~Ifvs~~----~~i~~ 233 (259)
T COG3568 182 --YRLA-------ARSP-----LNA--QAALTGAFAPAVGRTIRTF--------PSNTPLLRLDRIFVSKE----LAIRS 233 (259)
T ss_pred --ceec-------cCCc-----hhh--ccccccccCcccCcccCCC--------CCCCccccccEEEecCc----ccEEE
Confidence 2211 1110 010 1123333322221100123 33445679999999998 67888
Q ss_pred EEEcCCCC---CCCccceEEEEEec
Q 010500 448 YSVFSSKG---TSDHHIVKVDITKA 469 (509)
Q Consensus 448 ~~Vi~~~~---~SDH~PV~adf~L~ 469 (509)
+++..+.. .|||+||.|++.++
T Consensus 234 ~~v~~~~~a~~aSDHlPl~aeL~~~ 258 (259)
T COG3568 234 VHVLTDRLARVASDHLPLLAELRLK 258 (259)
T ss_pred EEeecCCCccccccccceEEEEecC
Confidence 88877653 89999999999875
No 3
>PRK05421 hypothetical protein; Provisional
Probab=99.92 E-value=4.4e-24 Score=214.15 Aligned_cols=209 Identities=19% Similarity=0.170 Sum_probs=138.1
Q ss_pred eeeecCCCCCcccHHHHHHHHHccCCcEEEEcCccCCcccCCChHHHHHHHhCCcEEEecc---CCCCceeEEEEeccce
Q 010500 214 VSFPTSSIASVGSTRTVLEVLRELDADLLALQDVKAEEENSMKPLSDLAAALGMNYVFAES---WAPEYGNAVLSKWPIK 290 (509)
Q Consensus 214 v~~~~~~~~~~~r~~~I~e~I~e~dpDVI~LQEV~~~~~~~~~~l~~La~~lG~~~~f~~s---~~g~~GvAILSR~PI~ 290 (509)
++||.....+. +.....+.| +.+|||||||||+.... +..+....++.+.|..+ ..+.+|++||||+|+.
T Consensus 47 ~t~NI~~~~~~-~~~~~l~~l-~~~~DiI~LQEv~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~GvaiLSR~pi~ 119 (263)
T PRK05421 47 LVWNIYKQQRA-GWLSVLKNL-GKDADLVLLQEAQTTPE-----LVQFATANYLAADQAPAFVLPQHPSGVMTLSKAHPV 119 (263)
T ss_pred EEEEccccccc-cHHHHHHHh-ccCCCEEEEEecccCcc-----hHHHhhcccchHHhccccccCCCccceeEeeecccc
Confidence 34555544443 345555666 99999999999975431 22344445555444433 2468999999999998
Q ss_pred eeeEeeecC--CCCCceEEEEEEEeCCccEEEEEEecCCC--CChHHHHHHHHHHHHHcC-CCCcEEEEecCCCCCCCCC
Q 010500 291 RWKVQKIFD--DTDFRNVLKATVDVPQIGEVNFHCTHLDH--LDENWRMKQMNAIIQSND-HGEAHILAGALNSLDETDY 365 (509)
Q Consensus 291 ~~~~~~l~~--~~~~R~~L~a~l~~~g~~~L~VintHL~~--~~~~~R~~Q~~~L~~~L~-~~~PvIL~GDFNs~p~s~~ 365 (509)
....+.... ....|+++.+++++++++.+.|+|+||++ .....|..|++.|.+.+. ...|+|+|||||+.+....
T Consensus 120 ~~~~~~~~~~~~~~~r~~l~a~~~~~~g~~l~v~ntHl~~~~~~~~~r~~q~~~l~~~~~~~~~p~Il~GDFN~~~~~~~ 199 (263)
T PRK05421 120 YCCPLREREPWLRLPKSALITEYPLPNGRTLLVVNIHAINFSLGVDVYSKQLEPIGDQIAHHSGPVILAGDFNTWSRKRM 199 (263)
T ss_pred eeeccCCCCccccCcceeEEEEEEeCCCCEEEEEEECccccCcChHHHHHHHHHHHHHHHhCCCCEEEEcccccCcccch
Confidence 754432221 13468999999999776789999999974 345678899999998875 4579999999998664320
Q ss_pred cchhhhhHHHhhhhcCCCChhHHHHHHHhhCCceecccccCCCcceeEecCCccccCCCCCCCceEEEEeCCCCCCceee
Q 010500 366 SSERWTDIVKYYEEMGKPTPKVEVMKFLKSKQYTDSKDFAGECESVVMIAKGQSVQGTCKYGTRVDYILASPNSPYKFVP 445 (509)
Q Consensus 366 ~~~~~~~i~~~~~~~G~~~~~~~~~~~L~~~glvDa~~~~~~~~~tT~~~~g~~~~~t~~~~~RIDyIf~S~~~~~kl~v 445 (509)
. .+..++...++.|+. ++... ....+..+|||||++ + +.+
T Consensus 200 -----~----------------~l~~~~~~~~l~~~~----------~~~~~----~~~~~~~~ID~I~~~-~----~~v 239 (263)
T PRK05421 200 -----N----------------ALKRFARELGLKEVR----------FTDDQ----RRRAFGRPLDFVFYR-G----LNV 239 (263)
T ss_pred -----H----------------HHHHHHHHcCCCccC----------cCCcc----cccccCCCcceEEEC-C----cEE
Confidence 0 012222233444421 11100 001125799999985 4 677
Q ss_pred eEEEEcCCCCCCCccceEEEEEecC
Q 010500 446 GSYSVFSSKGTSDHHIVKVDITKAQ 470 (509)
Q Consensus 446 ~s~~Vi~~~~~SDH~PV~adf~L~~ 470 (509)
.++.++. ...|||+||+++|.+.+
T Consensus 240 ~~~~v~~-~~~SDH~Pv~a~l~l~~ 263 (263)
T PRK05421 240 SKASVLV-TRASDHNPLLVEFSLKK 263 (263)
T ss_pred EEEEcCC-CCCCCccCEEEEEEecC
Confidence 8888875 57999999999999853
No 4
>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair]
Probab=99.92 E-value=5e-25 Score=218.12 Aligned_cols=228 Identities=22% Similarity=0.239 Sum_probs=156.2
Q ss_pred cccHHHHHHHHHccCCcEEEEcCccCCcccCCChHHHHHHHhCCcEEEeccCCCCceeEEEEeccceeeeEeeecC----
Q 010500 224 VGSTRTVLEVLRELDADLLALQDVKAEEENSMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRWKVQKIFD---- 299 (509)
Q Consensus 224 ~~r~~~I~e~I~e~dpDVI~LQEV~~~~~~~~~~l~~La~~lG~~~~f~~s~~g~~GvAILSR~PI~~~~~~~l~~---- 299 (509)
+.++..+.++|.+.+||||||||++...... +...+ ...||+.++.....++.||||+||.++..+.. .++.
T Consensus 12 Rar~~~~~~~l~~~~pDVlclQEtK~~~~~f--p~~~~-~~~GY~~~~~~gqKgysGVailsr~~~~~v~~-g~~~~~~~ 87 (261)
T COG0708 12 RARLKKLLDWLEEEQPDVLCLQETKAQDEQF--PREEL-EALGYHHVFNHGQKGYSGVAILSKKPPDDVRR-GFPGEEED 87 (261)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEecccCcccC--CHhHH-hhCCceEEEecCcCCcceEEEEEccCchhhhc-CCCCCccc
Confidence 5577889999999999999999998775432 11223 36899655555558999999999987764332 2332
Q ss_pred CCCCceEEEEEEEeCCccEEEEEEecCCCCC--h----HHHHHHHHHHHHHc----CCCCcEEEEecCCCCCCCCCcchh
Q 010500 300 DTDFRNVLKATVDVPQIGEVNFHCTHLDHLD--E----NWRMKQMNAIIQSN----DHGEAHILAGALNSLDETDYSSER 369 (509)
Q Consensus 300 ~~~~R~~L~a~l~~~g~~~L~VintHL~~~~--~----~~R~~Q~~~L~~~L----~~~~PvIL~GDFNs~p~s~~~~~~ 369 (509)
+.+.| ++.+.+. .+.|+|++++... . ..+..-...+.+++ ..+.|+|+|||||..+...+. ..
T Consensus 88 d~e~R-~I~a~~~-----~~~v~~~Y~PnG~~~~~~k~~yKl~f~~~l~~~l~~l~~~~~~~vl~GD~NIap~~iDv-~~ 160 (261)
T COG0708 88 DEEGR-VIEAEFD-----GFRVINLYFPNGSSIGLEKFDYKLRFLDALRNYLEELLKKGKPVVLCGDFNIAPEEIDV-AN 160 (261)
T ss_pred cccCc-EEEEEEC-----CEEEEEEEcCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcCCCEEEecccccCCchhcc-cC
Confidence 23456 6677774 2999999998632 2 23444444455444 366999999999999986521 11
Q ss_pred hhhHHHh--hhhcCCCChhHHHHHHHhhCCceecccccCCCc--ceeEecCCccccCCCCCCCceEEEEeCCCCCCceee
Q 010500 370 WTDIVKY--YEEMGKPTPKVEVMKFLKSKQYTDSKDFAGECE--SVVMIAKGQSVQGTCKYGTRVDYILASPNSPYKFVP 445 (509)
Q Consensus 370 ~~~i~~~--~~~~G~~~~~~~~~~~L~~~glvDa~~~~~~~~--~tT~~~~g~~~~~t~~~~~RIDyIf~S~~~~~kl~v 445 (509)
++ ... ....|+..++++.+..|.+.||+|+++..++.. .++|.++.... .. +.|+|||||++|+.+.. .+
T Consensus 161 ~~--~~~~n~~~~~f~~eeR~~~~~ll~~G~~D~~R~~~p~~~~YTwW~YR~~~~-~~-n~G~RID~~l~S~~L~~--~~ 234 (261)
T COG0708 161 PK--KRWLNEGNSGFLPEERAWFRRLLNAGFVDTFRLFHPEPEKYTWWDYRANAA-RR-NRGWRIDYILVSPALAD--RL 234 (261)
T ss_pred ch--hhhhcCCCCCCCHHHHHHHHHHHHcchhhhhHhhCCCCCcccccccccchh-hh-cCceeEEEEEeCHHHHH--HH
Confidence 11 111 234567777788888888999999999988754 36787766422 22 37999999999998532 24
Q ss_pred eEEEEcCCC----CCCCccceEEEEEe
Q 010500 446 GSYSVFSSK----GTSDHHIVKVDITK 468 (509)
Q Consensus 446 ~s~~Vi~~~----~~SDH~PV~adf~L 468 (509)
.++.+..+. .+|||.||+++|.+
T Consensus 235 ~~a~I~~~~rg~e~pSDHaPV~~e~~~ 261 (261)
T COG0708 235 KDAGIDREVRGWEKPSDHAPVWVELDL 261 (261)
T ss_pred HhcCccHHHhcCCCCCCcCcEEEEecC
Confidence 455554432 46999999999864
No 5
>TIGR00195 exoDNase_III exodeoxyribonuclease III. The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family
Probab=99.90 E-value=1.4e-22 Score=201.31 Aligned_cols=232 Identities=16% Similarity=0.115 Sum_probs=145.2
Q ss_pred eeecCCCCCcccHHHHHHHHHccCCcEEEEcCccCCcccCCChHHHHHHHhCCcEEEeccCCCCceeEEEEeccceeeeE
Q 010500 215 SFPTSSIASVGSTRTVLEVLRELDADLLALQDVKAEEENSMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRWKV 294 (509)
Q Consensus 215 ~~~~~~~~~~~r~~~I~e~I~e~dpDVI~LQEV~~~~~~~~~~l~~La~~lG~~~~f~~s~~g~~GvAILSR~PI~~~~~ 294 (509)
+||.++. ..+..++.++|++++||||||||+...... ....+....||.+++... .+.+|++|++|.+......
T Consensus 5 t~Ni~g~--~~~~~~~~~~l~~~~~DIi~LQE~~~~~~~---~~~~~~~~~g~~~~~~~~-~g~~Gvailsr~~~~~~~~ 78 (254)
T TIGR00195 5 SWNVNGL--RARLHKGLAWLKENQPDVLCLQETKVQDEQ---FPLEPFHKEGYHVFFSGQ-KGYSGVAIFSKEEPLSVRR 78 (254)
T ss_pred EEEcCcH--HHhHHHHHHHHHhcCCCEEEEEecccchhh---CCHHHhhcCCcEEEEecC-CCcceEEEEEcCCcceEEE
Confidence 4555433 345677899999999999999999765321 123455567887666554 5778999999954333222
Q ss_pred -eeecC-CCCCceEEEEEEEeCCccEEEEEEecCCCCC------hHHHHHHHHHHHHHcC----CCCcEEEEecCCCCCC
Q 010500 295 -QKIFD-DTDFRNVLKATVDVPQIGEVNFHCTHLDHLD------ENWRMKQMNAIIQSND----HGEAHILAGALNSLDE 362 (509)
Q Consensus 295 -~~l~~-~~~~R~~L~a~l~~~g~~~L~VintHL~~~~------~~~R~~Q~~~L~~~L~----~~~PvIL~GDFNs~p~ 362 (509)
..... +.+.| ++.+.+ . .+.++|+|+++.+ ...|.++++.|.+.+. .+.|+|+|||||+.+.
T Consensus 79 ~~~~~~~~~~~r-~i~~~~--~---~~~l~~~~~p~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~~pvIi~GDfN~~~~ 152 (254)
T TIGR00195 79 GFGVEEEDAEGR-IIMAEF--D---SFLVINGYFPNGSRDDSEKLPYKLQWLEALQNYLEKLVDKDKPVLICGDMNIAPT 152 (254)
T ss_pred CCCCcccccCCC-EEEEEE--C---CEEEEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccCCC
Confidence 11111 23455 445544 2 3889999998621 2346677777777663 4579999999999887
Q ss_pred CCCcchhhhhHHHhhhhcCCCChhHHHHHHHhhCCceecccccCCCc-ceeEe-cCCccccCCCCCCCceEEEEeCCCCC
Q 010500 363 TDYSSERWTDIVKYYEEMGKPTPKVEVMKFLKSKQYTDSKDFAGECE-SVVMI-AKGQSVQGTCKYGTRVDYILASPNSP 440 (509)
Q Consensus 363 s~~~~~~~~~i~~~~~~~G~~~~~~~~~~~L~~~glvDa~~~~~~~~-~tT~~-~~g~~~~~t~~~~~RIDyIf~S~~~~ 440 (509)
..+ .++ ........|+..++.+.++.+.+.+|+|+|+..++.. .+||. ..... -....+.||||||+++...
T Consensus 153 ~~d---~~~-~~~~~~~~~~~~~e~~~~~~l~~~~l~D~~r~~~~~~~~~T~~~~~~~~--~~~~~g~RID~i~~s~~~~ 226 (254)
T TIGR00195 153 EID---LHS-PDENRNHTGFLPEEREWLDRLLEAGLVDTFRKFNPDEGAYSWWDYRTKA--RDRNRGWRIDYFLVSEPLK 226 (254)
T ss_pred hhh---ccC-hhhcCCCcCcChHHHHHHHHHHHcCCEeeecccCCCCCCCcccCCcCCc--cccCCceEEEEEEECHHHH
Confidence 531 111 1111222344444455666666678999998777643 25543 22110 0124578999999999832
Q ss_pred CceeeeEEEEcC---C-CCCCCccceEEEE
Q 010500 441 YKFVPGSYSVFS---S-KGTSDHHIVKVDI 466 (509)
Q Consensus 441 ~kl~v~s~~Vi~---~-~~~SDH~PV~adf 466 (509)
. .+..+.+.. . .++|||+||.++|
T Consensus 227 ~--~v~~~~i~~~~~~~~~~SDH~Pv~~~~ 254 (254)
T TIGR00195 227 E--RCVDCGIDYDIRGSEKPSDHCPVVLEF 254 (254)
T ss_pred h--hhhEEEEcHHHhcCCCCCCcccEEEeC
Confidence 1 256676644 1 3679999999975
No 6
>TIGR03395 sphingomy sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.
Probab=99.89 E-value=2.3e-22 Score=203.82 Aligned_cols=139 Identities=17% Similarity=0.199 Sum_probs=104.5
Q ss_pred cccHHHHHHHHHccCCcEEEEcCccCCcccCCChHHHHHHHhCCcEEE-ecc--------------CCCCceeEEEEecc
Q 010500 224 VGSTRTVLEVLRELDADLLALQDVKAEEENSMKPLSDLAAALGMNYVF-AES--------------WAPEYGNAVLSKWP 288 (509)
Q Consensus 224 ~~r~~~I~e~I~e~dpDVI~LQEV~~~~~~~~~~l~~La~~lG~~~~f-~~s--------------~~g~~GvAILSR~P 288 (509)
..+.+.|++.+...+|||||||||....... ..+..|+..++|...+ +.. ....+|++||||+|
T Consensus 22 ~~R~~~i~~~~~~~~~DVV~LQEv~~~~~~~-~l~~~L~~~yp~~~~~~g~~~~g~~~~~g~~~~~~~~~~G~~iLSr~P 100 (283)
T TIGR03395 22 MERADLIASADYIKNQDVVILNEAFDTSASK-RLLDNLREEYPYQTDVIGRSKKGWDKTLGNYSSSALEDGGVAIVSKWP 100 (283)
T ss_pred hHHHHHHHHhhcccCCCEEEEecccchHHHH-HHHHHHHhhCCceEeecccccccchhccccccccCccCCEEEEEECCC
Confidence 5678899999999999999999997543211 2334566666654321 111 12467999999999
Q ss_pred ceeeeEeeecCC-----CCCceEEEEEEEeCCccEEEEEEecCCCC--------ChHHHHHHHHHHHHHcC-----CCCc
Q 010500 289 IKRWKVQKIFDD-----TDFRNVLKATVDVPQIGEVNFHCTHLDHL--------DENWRMKQMNAIIQSND-----HGEA 350 (509)
Q Consensus 289 I~~~~~~~l~~~-----~~~R~~L~a~l~~~g~~~L~VintHL~~~--------~~~~R~~Q~~~L~~~L~-----~~~P 350 (509)
|.....+.++.+ ...|+++.++++.+| ..++|++|||++. ....|..|+++|.+++. .+.|
T Consensus 101 i~~~~~~~f~~~~~~d~~~~kg~l~a~i~~~g-~~~~v~~THL~~~~~~~~~~~~~~~R~~Q~~~i~~~i~~~~~~~~~p 179 (283)
T TIGR03395 101 IEEKIQYIFNKGCGADNLSNKGFAYVKINKNG-KKFHVIGTHLQAQDSMCSKLGPASIRANQLNEIQDFIDSKNIPKDET 179 (283)
T ss_pred ccccEEEEccCCCCCccccCCceEEEEEecCC-eEEEEEEeCCCCCcccccccccHHHHHHHHHHHHHHHhhccCCCCce
Confidence 998776666432 236899999999887 8999999999863 15689999999999874 3568
Q ss_pred EEEEecCCCCCCCC
Q 010500 351 HILAGALNSLDETD 364 (509)
Q Consensus 351 vIL~GDFNs~p~s~ 364 (509)
+|||||||+.+++.
T Consensus 180 vIl~GDfN~~~~s~ 193 (283)
T TIGR03395 180 VLIGGDLNVNKGSN 193 (283)
T ss_pred EEEEeeCCCCCCCH
Confidence 99999999998764
No 7
>TIGR00633 xth exodeoxyribonuclease III (xth). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=99.89 E-value=1.9e-22 Score=199.05 Aligned_cols=235 Identities=19% Similarity=0.164 Sum_probs=142.7
Q ss_pred eeecCCCCCcccHHHH-HHHHHccCCcEEEEcCccCCcccCCChHHHHHHHhCCcEEEeccC-CCCceeEEEEeccceee
Q 010500 215 SFPTSSIASVGSTRTV-LEVLRELDADLLALQDVKAEEENSMKPLSDLAAALGMNYVFAESW-APEYGNAVLSKWPIKRW 292 (509)
Q Consensus 215 ~~~~~~~~~~~r~~~I-~e~I~e~dpDVI~LQEV~~~~~~~~~~l~~La~~lG~~~~f~~s~-~g~~GvAILSR~PI~~~ 292 (509)
+||.++. ..+.+++ +++|++++||||||||+....... ...+....||.++|.... .+.+|+|||+|+|+...
T Consensus 5 t~Nv~g~--~~~~~~~~~~~l~~~~~DIv~LQE~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~G~ailsr~~~~~~ 79 (255)
T TIGR00633 5 SWNVNGL--RARLHKLFLDWLKEEQPDVLCLQETKVADEQF---PAELFEELGYHVFFHGAKSKGYSGVAILSKVEPLDV 79 (255)
T ss_pred EEecccH--HHHhhccHHHHHHhcCCCEEEEEeccCchhhC---CHhHhccCCceEEEeecccCCcceEEEEEcCCcceE
Confidence 4444433 3455676 999999999999999998653211 123444578877665443 36789999999998765
Q ss_pred eE-eeecC-CCCCceEEEEEEEeCCccEEEEEEecCCCCC------hHHHHHHHHHHHHHc----CCCCcEEEEecCCCC
Q 010500 293 KV-QKIFD-DTDFRNVLKATVDVPQIGEVNFHCTHLDHLD------ENWRMKQMNAIIQSN----DHGEAHILAGALNSL 360 (509)
Q Consensus 293 ~~-~~l~~-~~~~R~~L~a~l~~~g~~~L~VintHL~~~~------~~~R~~Q~~~L~~~L----~~~~PvIL~GDFNs~ 360 (509)
.. +.... +.+.| ++.+.+ +.+.|+++|++... ...|..+++.+.+.+ ..+.|+|+|||||+.
T Consensus 80 ~~~~~~~~~~~~~r-~l~~~~-----~~~~i~~vy~p~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~~~~Il~GDFN~~ 153 (255)
T TIGR00633 80 RYGFGGEEHDEEGR-VITAEF-----DGFTVVNVYVPNGGSRGLERLEYKLQFWDALFQYYEKELDAGKPVIICGDMNVA 153 (255)
T ss_pred EECCCCCcccCCCc-EEEEEE-----CCEEEEEEEccCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccC
Confidence 43 11111 23344 333332 46899999997532 135667777776543 356799999999998
Q ss_pred CCCCCcchhhhhHHHhhhhcCCCChhHHHHHHHhhCCceecccccCCCc--ceeEecCCccccCCCCCCCceEEEEeCCC
Q 010500 361 DETDYSSERWTDIVKYYEEMGKPTPKVEVMKFLKSKQYTDSKDFAGECE--SVVMIAKGQSVQGTCKYGTRVDYILASPN 438 (509)
Q Consensus 361 p~s~~~~~~~~~i~~~~~~~G~~~~~~~~~~~L~~~glvDa~~~~~~~~--~tT~~~~g~~~~~t~~~~~RIDyIf~S~~ 438 (509)
+...+ +..........+...+....++.+.+.+|+|+|+..++.. .+||....... .....+.||||||++..
T Consensus 154 ~~~~d----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~~~~T~~~~~~~~-~~~~~~~rID~i~~s~~ 228 (255)
T TIGR00633 154 HTEID----LGNPKENKGNAGFTPEEREWFDELLEAGLVDTFRHFNPDTEGAYTWWDYRSGA-RDRNRGWRIDYFLVSEP 228 (255)
T ss_pred CChHH----ccChhhcCCCCCcCHHHHHHHHHHHHcCCEecchhhCCCCCCcCcCcCCccCc-cccCCceEEEEEEECHH
Confidence 76421 0000011111222222334455555689999998887654 35554221110 11235789999999986
Q ss_pred CCCceeeeEEEEcCCCCCCCccceEEEEE
Q 010500 439 SPYKFVPGSYSVFSSKGTSDHHIVKVDIT 467 (509)
Q Consensus 439 ~~~kl~v~s~~Vi~~~~~SDH~PV~adf~ 467 (509)
... .+..+.+.....+|||+||.++|+
T Consensus 229 ~~~--~~~~~~i~~~~~~SDH~pv~~~~~ 255 (255)
T TIGR00633 229 LAE--RVVDSYIDSEIRGSDHCPIVLELD 255 (255)
T ss_pred HHh--hhcEeEECCCCCCCCcccEEEEEC
Confidence 321 144566554445699999999873
No 8
>PRK13911 exodeoxyribonuclease III; Provisional
Probab=99.88 E-value=7.7e-22 Score=196.70 Aligned_cols=229 Identities=15% Similarity=0.113 Sum_probs=145.0
Q ss_pred eeecCCCCCcccH-HHHHHHHHccCCcEEEEcCccCCcccCCChHHHHHHHhCCcEEEec-cCCCCceeEEEEeccceee
Q 010500 215 SFPTSSIASVGST-RTVLEVLRELDADLLALQDVKAEEENSMKPLSDLAAALGMNYVFAE-SWAPEYGNAVLSKWPIKRW 292 (509)
Q Consensus 215 ~~~~~~~~~~~r~-~~I~e~I~e~dpDVI~LQEV~~~~~~~~~~l~~La~~lG~~~~f~~-s~~g~~GvAILSR~PI~~~ 292 (509)
+||.|+.- ... ..+.++|++.+||||||||++...... . + ...||..++.. ...++.|+||++|.+....
T Consensus 5 swNVNgir--~~~~~~~~~~l~~~~~DIiclQEtK~~~~~~----~-~-~~~gY~~~~~~~~~kgy~GVAi~~k~~~~~v 76 (250)
T PRK13911 5 SWNVNGLR--ACMTKGFMDFFNSVDADVFCIQESKMQQEQN----T-F-EFKGYFDFWNCAIKKGYSGVVTFTKKEPLSV 76 (250)
T ss_pred EEEeCChh--HhhhhhHHHHHHhcCCCEEEEEeeccccccc----c-c-ccCCceEEEEecccCccceEEEEEcCCchhe
Confidence 45555442 233 358899999999999999998764331 1 1 24577654432 2457889999999765443
Q ss_pred eEeeecC---CCCCceEEEEEEEeCCccEEEEEEecCCCCC-hH----HHHHHHHHHHHH---cCCCCcEEEEecCCCCC
Q 010500 293 KVQKIFD---DTDFRNVLKATVDVPQIGEVNFHCTHLDHLD-EN----WRMKQMNAIIQS---NDHGEAHILAGALNSLD 361 (509)
Q Consensus 293 ~~~~l~~---~~~~R~~L~a~l~~~g~~~L~VintHL~~~~-~~----~R~~Q~~~L~~~---L~~~~PvIL~GDFNs~p 361 (509)
. ..+.. +.++| ++.+.+ +.+.|+|++.++.. .. .|..-...+.++ +..+.++|+|||||..+
T Consensus 77 ~-~~~~~~~~d~eGR-~I~~~~-----~~~~l~nvY~Pn~~~~~~r~~~K~~~~~~~~~~l~~l~~~~~~Ii~GD~Nva~ 149 (250)
T PRK13911 77 S-YGINIEEHDKEGR-VITCEF-----ESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALELKKPVIVCGDLNVAH 149 (250)
T ss_pred E-EcCCCCcccccCC-EEEEEE-----CCEEEEEEEecCCCCCCcchHHHHHHHHHHHHHHHhcccCCCEEEEccccCCC
Confidence 2 12221 34566 445555 25899999998632 21 222222333333 34557999999999998
Q ss_pred CCCCcchhhhhHHHhhhhcCCCChhHHHHHHHhhCCceecccccCCC--ccee-EecCCccccCCCCCCCceEEEEeCCC
Q 010500 362 ETDYSSERWTDIVKYYEEMGKPTPKVEVMKFLKSKQYTDSKDFAGEC--ESVV-MIAKGQSVQGTCKYGTRVDYILASPN 438 (509)
Q Consensus 362 ~s~~~~~~~~~i~~~~~~~G~~~~~~~~~~~L~~~glvDa~~~~~~~--~~tT-~~~~g~~~~~t~~~~~RIDyIf~S~~ 438 (509)
...+.. .+. ......|+..++++.++.+...||+|+++..++. ..+| |.+.+.. -..+.+.||||||+++.
T Consensus 150 ~~~D~~-~~~---~~~~~~gf~~~er~~f~~~l~~gl~D~~R~~~p~~~~~yTww~~~~~~--~~~n~g~RIDyilvs~~ 223 (250)
T PRK13911 150 NEIDLE-NPK---TNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQA--RDKNIGWRIDYFLCSNP 223 (250)
T ss_pred Chhhcc-Chh---hcCCCCCcCHHHHHHHHHHHhcCCeehhhhhCCCCCCCCccCCCcCCc--cccCCcceEEEEEEChH
Confidence 754211 111 1122346666667777777778999999998876 2344 5444321 12356899999999998
Q ss_pred CCCceeeeEEEEcCCCCCCCccceEEEE
Q 010500 439 SPYKFVPGSYSVFSSKGTSDHHIVKVDI 466 (509)
Q Consensus 439 ~~~kl~v~s~~Vi~~~~~SDH~PV~adf 466 (509)
.. ..+..+.+......|||+||.++|
T Consensus 224 ~~--~~~~~~~i~~~~~~SDH~Pv~~~~ 249 (250)
T PRK13911 224 LK--TRLKDALIYKDILGSDHCPVGLEL 249 (250)
T ss_pred Hh--hhEEEEEECCCCCCCCcccEEEEe
Confidence 43 234566666666789999999987
No 9
>PTZ00297 pantothenate kinase; Provisional
Probab=99.86 E-value=2.2e-20 Score=222.13 Aligned_cols=249 Identities=16% Similarity=0.175 Sum_probs=148.6
Q ss_pred cHHHHHHHHHcc-CCcEEEEcCccCCccc-C--CC------h-HHHHHHHhCCc-EEEeccC---C-------CCceeEE
Q 010500 226 STRTVLEVLREL-DADLLALQDVKAEEEN-S--MK------P-LSDLAAALGMN-YVFAESW---A-------PEYGNAV 283 (509)
Q Consensus 226 r~~~I~e~I~e~-dpDVI~LQEV~~~~~~-~--~~------~-l~~La~~lG~~-~~f~~s~---~-------g~~GvAI 283 (509)
+.+++..+|++. +|||||||||...... . .. . .+.++ ..|+. ++++.+. . ...|+||
T Consensus 29 ~~~ri~~~i~~l~~~DIv~lQEvf~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~~~~~~~~~~~~~~~~~~~~~~~G~AI 107 (1452)
T PTZ00297 29 QHERIETFLASVDAYDVVLLQEVYAASVLPYFLQKQLCFQKMLVDELK-ARGFHHYVISKQPSYLTMLRYNVCSDNGLII 107 (1452)
T ss_pred cHHHHHHHHHhccCCCEEEEecccccccccccccccchhhHHHHHHHH-hcCCceeEeecCccccccccCccccCCEEEE
Confidence 579999999995 7899999999865311 0 01 1 22333 34654 4454432 1 5679999
Q ss_pred EEeccceeeeEeeecCC-----CCCceEEEEEEEeCC----ccEEEEEEecCCCC-ChHHHHHHHHHHHHHcC-------
Q 010500 284 LSKWPIKRWKVQKIFDD-----TDFRNVLKATVDVPQ----IGEVNFHCTHLDHL-DENWRMKQMNAIIQSND------- 346 (509)
Q Consensus 284 LSR~PI~~~~~~~l~~~-----~~~R~~L~a~l~~~g----~~~L~VintHL~~~-~~~~R~~Q~~~L~~~L~------- 346 (509)
||||||.....+.++.. ...|+++.|++++++ ++.++|+||||... .+..|..|++++.+++.
T Consensus 108 LSR~PI~~~~~~~l~~~~~~~~~~~RG~L~a~I~vp~~~g~~~~v~v~~tHL~~~~~~~~R~~Q~~ql~~~i~~~i~~~~ 187 (1452)
T PTZ00297 108 ASRFPIWQRGSYTFRNHERGEQSVRRGCLFAEVEVPLAEGGSQRIVFFNVHLRQEDSLPSTSSQVQETRRFVESVIANVY 187 (1452)
T ss_pred EECCChhhceeeecCcccccccccccceEEEEEEccccCCCCceEEEEEeCCCCCCCcchHHHHHHHHHHHHHHhhhhhc
Confidence 99999999998888753 248999999999973 25899999999963 34457777777666542
Q ss_pred ------CCCcEEEEecCCCC----CCCCCcchhhhhHHHhhhhcCCCChhHHHHHHHhhCCceecccccCCCccee----
Q 010500 347 ------HGEAHILAGALNSL----DETDYSSERWTDIVKYYEEMGKPTPKVEVMKFLKSKQYTDSKDFAGECESVV---- 412 (509)
Q Consensus 347 ------~~~PvIL~GDFNs~----p~s~~~~~~~~~i~~~~~~~G~~~~~~~~~~~L~~~glvDa~~~~~~~~~tT---- 412 (509)
...|+|||||||.. +......+.+..+...+... ..++.|++.......+.|
T Consensus 188 ~~~~~~~~~PvILaGDFN~~~~~~~~~~~~s~e~~~ml~~l~~~--------------~~~l~dv~~~~~~~~~~T~p~~ 253 (1452)
T PTZ00297 188 EQNNDGAEIPFVIAGDFNINGIDPHNGGHPTKRFQELLNELQDL--------------GSGVREVIYDETGQHPPTRPPI 253 (1452)
T ss_pred ccccCCCCCCEEEEeeCCCccccccccCCccHHHHHHHHHhhhc--------------cccHhHHhHhhcCCCCCCCCcc
Confidence 44689999999976 21100111222222211111 112333322222112222
Q ss_pred --EecCCccccCCCCCCCceEEEEeCCCCCCceeeeEEEEcCC--------CCCCCccceEEEEEecCCCCccCcccccc
Q 010500 413 --MIAKGQSVQGTCKYGTRVDYILASPNSPYKFVPGSYSVFSS--------KGTSDHHIVKVDITKAQSDEKQNDVGRKR 482 (509)
Q Consensus 413 --~~~~g~~~~~t~~~~~RIDyIf~S~~~~~kl~v~s~~Vi~~--------~~~SDH~PV~adf~L~~~~~~~~~~~~~~ 482 (509)
|+..... ..+.....||||||+++. +.+..+.++.. .++|||+||.|+|.++. ....
T Consensus 254 ~~fP~~~p~-~~~~~~~~riD~Ifv~~~----v~v~~~~v~~~~~~~~~~~~~~SDH~Pv~a~l~l~~-~~~~------- 320 (1452)
T PTZ00297 254 LFFPEQSKL-ERYSSTPQRQDYFFVTPC----VQVEKPRIEKFVVSSRRPYTYLSDHFGVSARLTLPL-NPSV------- 320 (1452)
T ss_pred ccccccCcc-ccccCCCcceeEEEEeCC----ceEEEEEEecccccCCCCCCCcCcCccEEEEEEeCC-Chhh-------
Confidence 2211100 012223479999999986 66777777322 24899999999999965 2211
Q ss_pred cccccceeeecCCCcccccc
Q 010500 483 YKPKQKVVKISGSSPAKGIW 502 (509)
Q Consensus 483 ~~~~~~v~~~~~~~~~~~~~ 502 (509)
.-.+......+.+.++++.=
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~ 340 (1452)
T PTZ00297 321 IFEGRSLLRLNFSSLSEAAV 340 (1452)
T ss_pred ccccccccccccchhhhhhh
Confidence 12233344555555555443
No 10
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional
Probab=99.81 E-value=6.7e-19 Score=193.00 Aligned_cols=141 Identities=13% Similarity=0.179 Sum_probs=97.0
Q ss_pred CCCcccHHHHHHHHHccCCcEEEEcCccCCcccCCChH-HHHHHHhCCcEEEeccCC--------CCceeEEEEe---cc
Q 010500 221 IASVGSTRTVLEVLRELDADLLALQDVKAEEENSMKPL-SDLAAALGMNYVFAESWA--------PEYGNAVLSK---WP 288 (509)
Q Consensus 221 ~~~~~r~~~I~e~I~e~dpDVI~LQEV~~~~~~~~~~l-~~La~~lG~~~~f~~s~~--------g~~GvAILSR---~P 288 (509)
.....|...|+++|..++|||||||||...... +.+ ..|. .+||..+|..... ...|+||+.| |.
T Consensus 281 L~W~yRk~lIl~EI~~~~aDIICLQEV~~~~~~--d~~~p~L~-~~GY~Gv~~~Kt~~~~~~~~~~~DGcAIFyr~drFe 357 (606)
T PLN03144 281 LSWTYRRQNLLREIVGYRADILCLQEVQSDHFE--EFFAPELD-KHGYQALYKKKTTEVYTGNTYVIDGCATFFRRDRFS 357 (606)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEeecCHHHHH--HHHHhhhh-hcCceEEEeCCCCccccccccCCceeEEEEECcceE
Confidence 334668899999999999999999999654221 111 2343 5788877754321 3568999975 66
Q ss_pred ceeeeEeeecC-------C---------CCCc-----eEEEEEEEeC---------C-ccEEEEEEecCCC--CChHHHH
Q 010500 289 IKRWKVQKIFD-------D---------TDFR-----NVLKATVDVP---------Q-IGEVNFHCTHLDH--LDENWRM 335 (509)
Q Consensus 289 I~~~~~~~l~~-------~---------~~~R-----~~L~a~l~~~---------g-~~~L~VintHL~~--~~~~~R~ 335 (509)
+++...+.+.. . ...| .++.+.++.. + +..|.|+||||.+ ...+.|.
T Consensus 358 Lv~~~~ief~~~~lslt~~~~~s~~~~~~l~Rl~kdNVAliv~Le~k~~~~~~~~~~~~~~l~VaNTHL~~~p~~~dvRl 437 (606)
T PLN03144 358 LVKKYEVEFNKAAQSLTEALIPSAQKKAALNRLLKDNVALIVVLEAKFGNQGADNGGKRQLLCVANTHIHANQELKDVKL 437 (606)
T ss_pred EEEeeeeeccchhhccCccccccccchhhhhhhccCcEEEEEEEEEecccccccCCCCccEEEEEEeeeccCCccchhHH
Confidence 66554433211 0 1123 4567777653 1 2469999999965 3456899
Q ss_pred HHHHHHHHHcC-----CCCcEEEEecCCCCCCCC
Q 010500 336 KQMNAIIQSND-----HGEAHILAGALNSLDETD 364 (509)
Q Consensus 336 ~Q~~~L~~~L~-----~~~PvIL~GDFNs~p~s~ 364 (509)
.|+..|++.+. .+.|+|||||||+.|++.
T Consensus 438 ~Q~~~Ll~~l~~~~~~~~~PvIlcGDFNS~P~S~ 471 (606)
T PLN03144 438 WQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSA 471 (606)
T ss_pred HHHHHHHHHHHHHhhcCCCceEEeccCCCCCCCh
Confidence 99999988763 468999999999999875
No 11
>KOG3873 consensus Sphingomyelinase family protein [Signal transduction mechanisms]
Probab=99.80 E-value=7.3e-20 Score=184.93 Aligned_cols=221 Identities=21% Similarity=0.141 Sum_probs=150.7
Q ss_pred eecCCCCCcccHHHHHHHHHccCCcEEEEcCccCCcccCCChHHHHHHH----hCCcEEEeccCCCCceeEEEEecccee
Q 010500 216 FPTSSIASVGSTRTVLEVLRELDADLLALQDVKAEEENSMKPLSDLAAA----LGMNYVFAESWAPEYGNAVLSKWPIKR 291 (509)
Q Consensus 216 ~~~~~~~~~~r~~~I~e~I~e~dpDVI~LQEV~~~~~~~~~~l~~La~~----lG~~~~f~~s~~g~~GvAILSR~PI~~ 291 (509)
.|+-..+...++.++.+++.+.+.||+.|||++...+ .+.|++. |.|..+|.. ..-+.|+++|||+||.+
T Consensus 19 ip~~Sk~R~~Rm~~~g~~l~~E~yDiv~LQEvWs~eD-----~~~L~~~~ss~yPysh~FHS-GimGaGL~vfSK~PI~~ 92 (422)
T KOG3873|consen 19 IPYVSKDRRHRMDAIGDELASEKYDIVSLQEVWSQED-----FEYLQSGCSSVYPYSHYFHS-GIMGAGLCVFSKHPILE 92 (422)
T ss_pred cccccchhHHHHHHHhHHHhhcccchhhHHHHHHHHH-----HHHHHHhccccCchHHhhhc-ccccCceEEeecCchhh
Confidence 3455666777899999999999999999999987642 3456553 333333322 12367999999999998
Q ss_pred eeEeeecCC-----------CCCceEEEEEEEeCCccEEEEEEecCCCC-------ChHHHHHHHHHHHHHcC----CCC
Q 010500 292 WKVQKIFDD-----------TDFRNVLKATVDVPQIGEVNFHCTHLDHL-------DENWRMKQMNAIIQSND----HGE 349 (509)
Q Consensus 292 ~~~~~l~~~-----------~~~R~~L~a~l~~~g~~~L~VintHL~~~-------~~~~R~~Q~~~L~~~L~----~~~ 349 (509)
...+..+.+ ..++++-.+.+.++| ..|+++|+||... .-.+|..|+..+.+++. .+.
T Consensus 93 t~~~~y~lNG~p~~i~rGDWf~GK~Vgl~~l~~~g-~~v~~yntHLHAeY~rq~D~YL~HR~~QAwdlaqfi~~t~q~~~ 171 (422)
T KOG3873|consen 93 TLFHRYSLNGYPHAIHRGDWFGGKGVGLTVLLVGG-RMVNLYNTHLHAEYDRQNDEYLCHRVAQAWDLAQFIRATRQNAD 171 (422)
T ss_pred hhhhccccCCccceeeeccccccceeEEEEEeeCC-EEeeeeehhccccccccCchhhhHHHHHHHHHHHHHHHHhcCCc
Confidence 766555431 346788888999988 9999999999852 13479999999999883 567
Q ss_pred cEEEEecCCCCCCCCCcchhhhhHHHhhhhcCCCChhHHHHHHHhhCCceecccccCCCc--c-----------------
Q 010500 350 AHILAGALNSLDETDYSSERWTDIVKYYEEMGKPTPKVEVMKFLKSKQYTDSKDFAGECE--S----------------- 410 (509)
Q Consensus 350 PvIL~GDFNs~p~s~~~~~~~~~i~~~~~~~G~~~~~~~~~~~L~~~glvDa~~~~~~~~--~----------------- 410 (509)
-||++||||..|.+-. .+++...+++|+|...++.+ .
T Consensus 172 vVI~~GDLN~~P~dl~------------------------~~ll~~a~l~daw~~~h~~q~e~~~~r~s~~~~l~~g~tc 227 (422)
T KOG3873|consen 172 VVILAGDLNMQPQDLG------------------------HKLLLSAGLVDAWTSLHLDQCESDSFRLSEDKELVEGNTC 227 (422)
T ss_pred EEEEecCCCCCccccc------------------------eeeeeccchhhhHhhhchhhhcCcccccchhhhhhcCCcc
Confidence 7999999999998641 12333556667765554311 0
Q ss_pred ----eeEecCCccccCCCCCCCceEEEEeCCCCCCceeeeEEEEcC------CCCCCCccceEEEEEecC
Q 010500 411 ----VVMIAKGQSVQGTCKYGTRVDYILASPNSPYKFVPGSYSVFS------SKGTSDHHIVKVDITKAQ 470 (509)
Q Consensus 411 ----tT~~~~g~~~~~t~~~~~RIDyIf~S~~~~~kl~v~s~~Vi~------~~~~SDH~PV~adf~L~~ 470 (509)
.+|...- .......+.||||+|+++..- ..+..+++... +-..|||.+++++|.+.+
T Consensus 228 d~~~N~y~~aq--k~~ddp~~~RiDYvl~k~~~~-~~~~a~~~~t~~rvP~~d~s~SDH~Al~a~L~I~~ 294 (422)
T KOG3873|consen 228 DSPLNCYTSAQ--KREDDPLGKRIDYVLVKPGDC-NAKIAEVEFTEPRVPGEDCSYSDHEALMATLKIFK 294 (422)
T ss_pred cCcchhhhHHH--hCCCCccceeeeEEEEcCcce-EEEeeeEEecCCCCCCCCCCccchhhheeEEEeec
Confidence 1222100 001122489999999999851 12233444332 124799999999999988
No 12
>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms]
Probab=99.75 E-value=4.5e-18 Score=166.14 Aligned_cols=223 Identities=19% Similarity=0.197 Sum_probs=151.5
Q ss_pred CceeeecCCCCCc---ccHHHHHHHHHccCCcEEEEcCccCCcccCCChHHHHHHHhCCcEEEeccCCCCceeEEE--Ee
Q 010500 212 SSVSFPTSSIASV---GSTRTVLEVLRELDADLLALQDVKAEEENSMKPLSDLAAALGMNYVFAESWAPEYGNAVL--SK 286 (509)
Q Consensus 212 ~~v~~~~~~~~~~---~r~~~I~e~I~e~dpDVI~LQEV~~~~~~~~~~l~~La~~lG~~~~f~~s~~g~~GvAIL--SR 286 (509)
|-..|+..+.+++ .++.+|..+|+-+.|||||||||-.... +. +.+.-.++..+..+..++++.++| |+
T Consensus 101 S~~~WnidgLdln~l~~RMrAv~H~i~l~sPdiiflQEV~p~~y---~~---~~K~~s~y~i~~~~~~~~~~~~~l~~s~ 174 (349)
T KOG2756|consen 101 SLITWNIDGLDLNNLSERMRAVCHYLALYSPDVIFLQEVIPPYY---SY---LKKRSSNYEIITGHEEGYFTAIMLKKSR 174 (349)
T ss_pred EEEEeeccccccchHHHHHHHHHHHHHhcCCCEEEEeecCchhh---HH---HHHhhhheeEEEeccceeeeeeeeehhh
Confidence 4457888888887 8999999999999999999999965532 22 332223344444445566665554 67
Q ss_pred ccceeeeEeeecCCCCCceEEEEEEEeCCccEEEEEEecCCCC--ChHHHH-------HHHHHHHHHcCCCCcEEEEecC
Q 010500 287 WPIKRWKVQKIFDDTDFRNVLKATVDVPQIGEVNFHCTHLDHL--DENWRM-------KQMNAIIQSNDHGEAHILAGAL 357 (509)
Q Consensus 287 ~PI~~~~~~~l~~~~~~R~~L~a~l~~~g~~~L~VintHL~~~--~~~~R~-------~Q~~~L~~~L~~~~PvIL~GDF 357 (509)
+.++..+.+.++.....|.+..+.+.++| ..+.+.++||.+. .+..|. .|++++++.+ ++..||++||+
T Consensus 175 ~~Vks~~~i~F~NS~M~R~L~I~Ev~v~G-~Kl~l~tsHLEStr~h~P~r~~qF~~~~~k~~EaIe~l-PnA~ViFGGD~ 252 (349)
T KOG2756|consen 175 VKVKSQEIIPFPNSKMMRNLLIVEVNVSG-NKLCLMTSHLESTRGHAPERMNQFKMVLKKMQEAIESL-PNATVIFGGDT 252 (349)
T ss_pred cCccccceeccCcchhhheeEEEEEeecC-ceEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHhC-CCceEEEcCcc
Confidence 88888888888877889999999999998 7799999999862 334444 4455555555 66789999999
Q ss_pred CCCCCCCCcchhhhhHHHhhhhcCCCChhHHHHHHHhhCCceecccccC-CCc-ceeEec-CCccccCCCCCCCceEEEE
Q 010500 358 NSLDETDYSSERWTDIVKYYEEMGKPTPKVEVMKFLKSKQYTDSKDFAG-ECE-SVVMIA-KGQSVQGTCKYGTRVDYIL 434 (509)
Q Consensus 358 Ns~p~s~~~~~~~~~i~~~~~~~G~~~~~~~~~~~L~~~glvDa~~~~~-~~~-~tT~~~-~g~~~~~t~~~~~RIDyIf 434 (509)
|-...... ..+- -.+++|+|.+++ +.. .+||.. .|.+..++.....|+|.||
T Consensus 253 NlrD~ev~---------------r~~l----------PD~~vDvWE~lg~p~~~~FTwDT~~N~nl~G~~a~k~RfDRi~ 307 (349)
T KOG2756|consen 253 NLRDREVT---------------RCGL----------PDNIVDVWEFLGKPKHCQFTWDTQMNSNLGGTAACKLRFDRIF 307 (349)
T ss_pred cchhhhcc---------------cCCC----------CchHHHHHHHhCCCCcCceeeecccCcccchhHHHHHHHHHHh
Confidence 97655331 1111 237899999998 443 378875 3444455655679999999
Q ss_pred eCCCCC-CceeeeEEEEc-----C--CCCCCCccceEEEEE
Q 010500 435 ASPNSP-YKFVPGSYSVF-----S--SKGTSDHHIVKVDIT 467 (509)
Q Consensus 435 ~S~~~~-~kl~v~s~~Vi-----~--~~~~SDH~PV~adf~ 467 (509)
++-... ..+.+...... . ...+|||+++.++|.
T Consensus 308 ~r~~~~~G~~~~~~l~l~g~~kiRgc~~fPSDHwgll~Tl~ 348 (349)
T KOG2756|consen 308 FRAAAEEGHIIPRSLDLLGLEKLRGCGRFPSDHWGLLCTLD 348 (349)
T ss_pred hhhhhhcCCcCccccchhhhhhhccCCCCCcccceeeeecc
Confidence 943310 00222222211 1 125899999999985
No 13
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional
Probab=99.72 E-value=1.2e-16 Score=159.33 Aligned_cols=193 Identities=16% Similarity=0.147 Sum_probs=121.9
Q ss_pred HHHHHHHcc-CCcEEEEcCccCCccc--------CCC----hHHH----HHH--HhCCcEEEeccC---CCCceeEEEEe
Q 010500 229 TVLEVLREL-DADLLALQDVKAEEEN--------SMK----PLSD----LAA--ALGMNYVFAESW---APEYGNAVLSK 286 (509)
Q Consensus 229 ~I~e~I~e~-dpDVI~LQEV~~~~~~--------~~~----~l~~----La~--~lG~~~~f~~s~---~g~~GvAILSR 286 (509)
.|..+|... ++|||++||+...... ... ...+ |.. +-++.|+|.... ++.+|+||+||
T Consensus 46 ~v~~l~~~~~~~DIla~QEags~p~~a~~~~~~~~~~g~~~~v~ey~w~l~~~srpgm~YiY~~aiD~~ggr~glAIlSr 125 (271)
T PRK15251 46 NVRQLLSGENPADILMVQEAGSLPSSAVPTGRHVQPGGVGIPIDEYTWNLGTRSRPNQVYIYYSRVDVGANRVNLAIVSR 125 (271)
T ss_pred hHHHHhcCCCCCCEEEEEecCCCccccccccccccccccccCcccEEEEccCccCCCceEEEEecccCCCCceeEEEEec
Confidence 466677664 6999999999765332 000 0011 211 124555565442 47899999999
Q ss_pred ccceeeeEeeecCCCCCceEEEEEEEeCCccEEEEEEecCCCCChHHHHHHHHHHHHHcC---CCCcEEEEecCCCCCCC
Q 010500 287 WPIKRWKVQKIFDDTDFRNVLKATVDVPQIGEVNFHCTHLDHLDENWRMKQMNAIIQSND---HGEAHILAGALNSLDET 363 (509)
Q Consensus 287 ~PI~~~~~~~l~~~~~~R~~L~a~l~~~g~~~L~VintHL~~~~~~~R~~Q~~~L~~~L~---~~~PvIL~GDFNs~p~s 363 (509)
+|.++...+.++ ..+.|.++.++++ + ..|+++|+.+....++..+++.+.++.. +..|+++|||||..|++
T Consensus 126 ~~a~~~~~l~~p-~~~~Rpilgi~i~--~---~~ffstH~~a~~~~da~aiV~~I~~~f~~~~~~~pw~I~GDFNr~P~s 199 (271)
T PRK15251 126 RRADEVIVLRPP-TVASRPIIGIRIG--N---DVFFSIHALANGGTDAGAIVRAVHNFFRPNMRHINWMIAGDFNRSPDR 199 (271)
T ss_pred ccccceEEecCC-CCcccceEEEEec--C---eEEEEeeecCCCCccHHHHHHHHHHHHhhccCCCCEEEeccCCCCCcc
Confidence 999877666655 4668989988773 2 6899999997645668899999988864 33689999999999987
Q ss_pred CCcchhhhhHHHhhhhcCCCChhHHHHHHHhhCCceecccccCCCcceeEecCCccccCCCCCCCceEEEEeCCCCCCce
Q 010500 364 DYSSERWTDIVKYYEEMGKPTPKVEVMKFLKSKQYTDSKDFAGECESVVMIAKGQSVQGTCKYGTRVDYILASPNSPYKF 443 (509)
Q Consensus 364 ~~~~~~~~~i~~~~~~~G~~~~~~~~~~~L~~~glvDa~~~~~~~~~tT~~~~g~~~~~t~~~~~RIDyIf~S~~~~~kl 443 (509)
.. .. |....+........++. +|+.++.+||||++.+...+..
T Consensus 200 l~------------------------~~-l~~~~~~~~~~iv~p~~------------pT~~s~~~IDYiv~~~s~~~~~ 242 (271)
T PRK15251 200 LE------------------------ST-LDTEHLRNRVNIVAPTE------------PTQRSGGTLDYAVTGNSNQTFG 242 (271)
T ss_pred hh------------------------hh-hcchhcccccEEeCCCC------------CCCCCCCeeEEEEecCcccccc
Confidence 51 00 10111211111112221 3445688999999976543320
Q ss_pred e--eeEEEE---cCCCCCCCccceEE
Q 010500 444 V--PGSYSV---FSSKGTSDHHIVKV 464 (509)
Q Consensus 444 ~--v~s~~V---i~~~~~SDH~PV~a 464 (509)
. +....+ +.....|||+||..
T Consensus 243 ~~~i~a~l~~~~~~~~~aSDH~PV~f 268 (271)
T PRK15251 243 PPLLAASLMLASLRSQLASDHFPVNF 268 (271)
T ss_pred ccchheeeeecccccccccCcccccc
Confidence 0 222223 33557999999975
No 14
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []. Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....
Probab=99.65 E-value=2.6e-16 Score=150.20 Aligned_cols=136 Identities=23% Similarity=0.266 Sum_probs=76.7
Q ss_pred cHHHHHHHHHccCCcEEEEcCccCCcccCCChHHHHHHHhCCcEEEeccCC-----CCceeEEEEeccceeeeEeeecC-
Q 010500 226 STRTVLEVLRELDADLLALQDVKAEEENSMKPLSDLAAALGMNYVFAESWA-----PEYGNAVLSKWPIKRWKVQKIFD- 299 (509)
Q Consensus 226 r~~~I~e~I~e~dpDVI~LQEV~~~~~~~~~~l~~La~~lG~~~~f~~s~~-----g~~GvAILSR~PI~~~~~~~l~~- 299 (509)
+.+.|+++|.+.+||||||||+....... .....+...+++...+..... ..+|++|++|.|+.......+..
T Consensus 17 ~~~~i~~~i~~~~~Dii~LQEv~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~r~~~~~~~~~~~~~~ 95 (249)
T PF03372_consen 17 KRREIAQWIAELDPDIIALQEVRNDDLSE-LLEEQLRGYLGYYGSFWPGNSPPSDAGGYGVAILSRSPIFSSVSYVFSLF 95 (249)
T ss_dssp HHHHHHHHHHHHT-SEEEEEEEESHHHHH-HHHHHHHTCTTHEEEEEETSSSTTCSSSEEEEEEESSCCCEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEecchhhhhhh-hhhhhcccccccccceeccccccccccCceEEEEEccccccccccccccc
Confidence 45669999999999999999997542110 011233333332333322221 35799999999987665544421
Q ss_pred -CCCCc-------eEEEEEEEeCCccEEEEEEecCCCCChHHHHHHHHHHHHHc----C--CCCcEEEEecCCCCCCCC
Q 010500 300 -DTDFR-------NVLKATVDVPQIGEVNFHCTHLDHLDENWRMKQMNAIIQSN----D--HGEAHILAGALNSLDETD 364 (509)
Q Consensus 300 -~~~~R-------~~L~a~l~~~g~~~L~VintHL~~~~~~~R~~Q~~~L~~~L----~--~~~PvIL~GDFNs~p~s~ 364 (509)
..... ....+.+.+.+ ..|.|+++|+++ ....|..|...+.+.+ . ...|+|||||||+.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~~~H~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~GDfN~~~~~~ 172 (249)
T PF03372_consen 96 SKPGIRIFRRSSKSKGIVPVSING-KPITVVNVHLPS-SNDERQEQWRELLARIQKIYADNPNEPVIVMGDFNSRPDSR 172 (249)
T ss_dssp SSSTTCEEEEEEEEEEEEEEEEET-EEEEEEEEETTS-HHHHHHHHHHHHHHHHHHHHHTSSCCEEEEEEE-SS-BSSG
T ss_pred cccccccccccccccccccccccc-eEEEeeeccccc-cchhhhhhhhhhhhhhhhcccccccceEEEEeecccCCccc
Confidence 11111 11111122224 789999999985 3334444444555444 1 223799999999998764
No 15
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.59 E-value=7.8e-15 Score=147.95 Aligned_cols=206 Identities=17% Similarity=0.103 Sum_probs=129.1
Q ss_pred CCcccHHHHHHHHHccCCcEEEEcCccCCcccCCChHHHHHHHhCCcEEEeccCCCCceeEEEEecc-ceeeeEeeecCC
Q 010500 222 ASVGSTRTVLEVLRELDADLLALQDVKAEEENSMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWP-IKRWKVQKIFDD 300 (509)
Q Consensus 222 ~~~~r~~~I~e~I~e~dpDVI~LQEV~~~~~~~~~~l~~La~~lG~~~~f~~s~~g~~GvAILSR~P-I~~~~~~~l~~~ 300 (509)
-......++...+...++|+|.+||+...... ....++..+.+. .+.....+.++.+++||.+ +.... ..+.-
T Consensus 98 ~~n~~~~k~Lsl~~~~~~D~v~~~E~~~~~~~---~~~~l~~~yP~~-~~~~~~~~~~~~a~~sr~~~~~~~~--~e~~~ 171 (309)
T COG3021 98 FDNASVAKLLSLIQQLDADAVTTPEGVQLWTA---KVGALAAQYPAF-ILCQHPTGVFTLAILSRRPCCPLTE--AEPWL 171 (309)
T ss_pred ccCcCHHHHHHHHhhhCcchhhhHHHHHHhHh---HHHHHHHhCCce-eecCCCCCeeeeeeccccccccccc--cCccc
Confidence 34567889999999999999999999654221 223455555443 3333334778889999875 21111 11112
Q ss_pred CCCceEEEEEEEeCCccEEEEEEecCCC---CChHHHHHHHHHHHHHcC-CCCcEEEEecCCCCCCCCCcchhhhhHHHh
Q 010500 301 TDFRNVLKATVDVPQIGEVNFHCTHLDH---LDENWRMKQMNAIIQSND-HGEAHILAGALNSLDETDYSSERWTDIVKY 376 (509)
Q Consensus 301 ~~~R~~L~a~l~~~g~~~L~VintHL~~---~~~~~R~~Q~~~L~~~L~-~~~PvIL~GDFNs~p~s~~~~~~~~~i~~~ 376 (509)
..++..+.......+|+++.+++.|... .....| .|..++.+.+. -.+|+|++||||+.|.+. +.+
T Consensus 172 ~~pk~~~~t~~~~~~g~~l~v~~lh~~~~~~~~~~~~-~ql~~l~~~i~~~~gpvIlaGDfNa~pWS~--------~~~- 241 (309)
T COG3021 172 RLPKSALATAYPLPDGTELTVVALHAVNFPVGTDPQR-AQLLELGDQIAGHSGPVILAGDFNAPPWSR--------TAK- 241 (309)
T ss_pred cCCccceeEEEEcCCCCEEEEEeeccccccCCccHHH-HHHHHHHHHHHcCCCCeEEeecCCCcchhH--------HHH-
Confidence 3455566666666667999999999983 223444 88888888774 558999999999988764 111
Q ss_pred hhhcCCCChhHHHHHHHhhCCceecccccCCCcceeEecCCccccCCCCCCCceEEEEeCCCCCCceeeeEEEEcCCCCC
Q 010500 377 YEEMGKPTPKVEVMKFLKSKQYTDSKDFAGECESVVMIAKGQSVQGTCKYGTRVDYILASPNSPYKFVPGSYSVFSSKGT 456 (509)
Q Consensus 377 ~~~~G~~~~~~~~~~~L~~~glvDa~~~~~~~~~tT~~~~g~~~~~t~~~~~RIDyIf~S~~~~~kl~v~s~~Vi~~~~~ 456 (509)
.+...+--+++...+-.+..+++... ..-.+..|||||+++- .+....+..+ .+
T Consensus 242 ---------------R~~~l~~~~~~~~aG~~~~~~~p~~~-----~r~~g~PIDhvf~rgl-----~~~ka~rl~~-~g 295 (309)
T COG3021 242 ---------------RMAALGGLRAAPRAGLWEVRFTPDER-----RRAFGLPIDHVFYRGL-----TVMKARRLPD-RG 295 (309)
T ss_pred ---------------HHHHhcccccchhccCCccccCHHHH-----hhccCCCcceeeecCc-----chhhhhhccc-cC
Confidence 11111222333334422222332211 1135788999999983 3445555544 79
Q ss_pred CCccceEEEEEec
Q 010500 457 SDHHIVKVDITKA 469 (509)
Q Consensus 457 SDH~PV~adf~L~ 469 (509)
|||+||.++|++-
T Consensus 296 SDH~PLLveF~~~ 308 (309)
T COG3021 296 SDHRPLLVEFSYG 308 (309)
T ss_pred CCCCceEEEEEec
Confidence 9999999999863
No 16
>KOG2338 consensus Transcriptional effector CCR4-related protein [Transcription]
Probab=99.49 E-value=6.3e-13 Score=140.36 Aligned_cols=139 Identities=19% Similarity=0.241 Sum_probs=96.8
Q ss_pred cccHHHHHHHHHccCCcEEEEcCccCCcccCCChHHHHHHHhCCcEEEeccC-CCCceeEEEEe---ccceeeeEeeecC
Q 010500 224 VGSTRTVLEVLRELDADLLALQDVKAEEENSMKPLSDLAAALGMNYVFAESW-APEYGNAVLSK---WPIKRWKVQKIFD 299 (509)
Q Consensus 224 ~~r~~~I~e~I~e~dpDVI~LQEV~~~~~~~~~~l~~La~~lG~~~~f~~s~-~g~~GvAILSR---~PI~~~~~~~l~~ 299 (509)
..|...|+.+|..++|||+|||||+..+.. ...+.+...+||...|.... ....|+||+.+ |.++....+.+.+
T Consensus 148 ~~R~~~Ll~EL~~~dpDIlCLQEVq~d~~~--~~~~~~~~~lGy~~~~~r~t~~KthG~ai~w~~~~F~lv~~~~l~y~~ 225 (495)
T KOG2338|consen 148 LRRSQNLLNELKHYDPDVLCLQEVQEDHYP--EFWQPLLGKLGYTGFFKRRTGTKTHGVAILWHSAKFKLVNHSELNYFD 225 (495)
T ss_pred hHHhHHHHHHHhhcCCCeeeehhhhhhhhH--HHHHHHHhhcCceEEEEeccCCCCceEEEEEecccceecccchhhccc
Confidence 567899999999999999999999876432 23345556789988776554 56789999975 4444332222222
Q ss_pred C---CC--CceEEEEEEEe--CC--ccEEEEEEecCCC--CChHHHHHHHHHHHHHcC-------CCCcEEEEecCCCCC
Q 010500 300 D---TD--FRNVLKATVDV--PQ--IGEVNFHCTHLDH--LDENWRMKQMNAIIQSND-------HGEAHILAGALNSLD 361 (509)
Q Consensus 300 ~---~~--~R~~L~a~l~~--~g--~~~L~VintHL~~--~~~~~R~~Q~~~L~~~L~-------~~~PvIL~GDFNs~p 361 (509)
. .. ....+.+.++. .+ ++.+.|+||||-+ .....|..|...|++.++ .+.|+|+|||||+.|
T Consensus 226 ~~~~l~n~~NV~lvv~l~f~~~~~~sq~ilVanTHLl~np~~~~vrL~Q~~iiL~~~~~~~~~~~~~~pi~l~GDfNt~p 305 (495)
T KOG2338|consen 226 SGSALANRDNVGLVVSLEFRLVDESSQGILVANTHLLFNPSRSDVRLAQVYIILAELEKMSKSSKSHWPIFLCGDFNTEP 305 (495)
T ss_pred ccchhhcccceeEEEEEEecccCcccCceEEEeeeeeecCcccchhhHHHHHHHHHHHHHHhhcccCCCeEEecCCCCCC
Confidence 1 11 12233334433 21 3689999999975 456789999999988763 356999999999999
Q ss_pred CCC
Q 010500 362 ETD 364 (509)
Q Consensus 362 ~s~ 364 (509)
.+.
T Consensus 306 ~~~ 308 (495)
T KOG2338|consen 306 DSP 308 (495)
T ss_pred CCC
Confidence 865
No 17
>smart00476 DNaseIc deoxyribonuclease I. Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.
Probab=99.42 E-value=8e-12 Score=126.27 Aligned_cols=130 Identities=16% Similarity=0.172 Sum_probs=78.7
Q ss_pred cHHHHHHHHHccCCcEEEEcCccCCcccCC-ChHHHHHHHh--CCcEEEeccCC---CCceeEEEEec---cceeeeEee
Q 010500 226 STRTVLEVLRELDADLLALQDVKAEEENSM-KPLSDLAAAL--GMNYVFAESWA---PEYGNAVLSKW---PIKRWKVQK 296 (509)
Q Consensus 226 r~~~I~e~I~e~dpDVI~LQEV~~~~~~~~-~~l~~La~~l--G~~~~f~~s~~---g~~GvAILSR~---PI~~~~~~~ 296 (509)
+.+.|++.|+ ++|||++|||........ ..+..|.... +|.++.....+ ...-.+++.|- .+.... .
T Consensus 38 r~~~i~~il~--~~DIiglQEV~d~q~~~l~~ll~~Ln~~~~~~Y~~v~s~r~gr~~~~E~~a~~Yr~drv~v~~~~--~ 113 (276)
T smart00476 38 LMSIIVKILS--RYDIALVQEVRDSDLSAVPKLMDQLNSDSPNTYSYVSSEPLGRNSYKEQYLFLYRSDLVSVLDSY--L 113 (276)
T ss_pred HHHHHHHHhc--cCCEEEEEEeecchhHHHHHHHHHHhhcCCCCceEEecCCCCCCCCCEEEEEEEecceEEEcccc--e
Confidence 5677888887 779999999976532211 1122343323 23333222111 12235677663 333332 2
Q ss_pred ecC------CCCCceEEEEEEEeCC--ccEEEEEEecCCCCChHHHHHHHHHHHHH----cC--CCCcEEEEecCCCCCC
Q 010500 297 IFD------DTDFRNVLKATVDVPQ--IGEVNFHCTHLDHLDENWRMKQMNAIIQS----ND--HGEAHILAGALNSLDE 362 (509)
Q Consensus 297 l~~------~~~~R~~L~a~l~~~g--~~~L~VintHL~~~~~~~R~~Q~~~L~~~----L~--~~~PvIL~GDFNs~p~ 362 (509)
+++ ....|...++.++.+. +..+.++++|+++ ..+..+++.|.+. .+ ...++||+||||+.+.
T Consensus 114 f~d~~~~~~~~F~ReP~~~~F~~~~~~~~~F~li~~H~~p---~~~~~e~~aL~~v~~~~~~~~~~~~villGDFNa~~~ 190 (276)
T smart00476 114 YDDGCECGNDVFSREPFVVKFSSPSTAVKEFVIVPLHTTP---EAAVAEIDALYDVYLDVRQKWGTEDVIFMGDFNAGCS 190 (276)
T ss_pred ecCCCCCccccccccceEEEEEeCCCCCccEEEEEecCCh---HHHHHHHHHHHHHHHHHHHhhccCCEEEEccCCCCCC
Confidence 333 2347888999998775 3589999999985 3445566555542 22 5689999999999765
No 18
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues. Mg(2+)-dependent/Li(+)-sensitive enzymes.
Probab=99.41 E-value=1.4e-11 Score=126.68 Aligned_cols=240 Identities=16% Similarity=0.069 Sum_probs=127.3
Q ss_pred HHHHHHHHHc-------cCCcE--EEEcCccCCccc------C---CChHHHHHHHhC--CcEEEecc-CCCCceeEEEE
Q 010500 227 TRTVLEVLRE-------LDADL--LALQDVKAEEEN------S---MKPLSDLAAALG--MNYVFAES-WAPEYGNAVLS 285 (509)
Q Consensus 227 ~~~I~e~I~e-------~dpDV--I~LQEV~~~~~~------~---~~~l~~La~~lG--~~~~f~~s-~~g~~GvAILS 285 (509)
.+.+.++|.. .+||| |+|||+...... . ..-...+...++ ..|..... .-++.++.|+.
T Consensus 20 ~~~l~~~l~~~~~~~~~~~pDI~viglQEi~~~~~~~~~~~~~~~~~~W~~~i~~~l~~~~~Y~~v~~~~l~gi~l~vf~ 99 (310)
T smart00128 20 KVDVTSWLFQKIDVKQSEKPDIYVIGLQEVVDLENGVLLETIAGKERLWSKLIESSLNGDGQYNVLAKVRLVGILVLVFV 99 (310)
T ss_pred hhhHHHhhccccccccCCCCCEEEEEeeeecccchhhhhhccchhHHHHHHHHHHhcCCCCceEEEeeeeecceEEEEEE
Confidence 4555556554 67999 779999321100 0 001122334454 34433222 22455677787
Q ss_pred eccc----eeeeEeeecCC----CCCceEEEEEEEeCCccEEEEEEecCCCC--ChHHHHHHHHHHHHHcC---------
Q 010500 286 KWPI----KRWKVQKIFDD----TDFRNVLKATVDVPQIGEVNFHCTHLDHL--DENWRMKQMNAIIQSND--------- 346 (509)
Q Consensus 286 R~PI----~~~~~~~l~~~----~~~R~~L~a~l~~~g~~~L~VintHL~~~--~~~~R~~Q~~~L~~~L~--------- 346 (509)
|..+ ..........+ ...++++.+.+.+.+ ..+.|+++||.+. ....|..+...|++.+.
T Consensus 100 ~~~~~~~i~~v~~~~v~~G~~~~~~nKG~v~i~~~~~~-~~~~fv~~HL~a~~~~~~~R~~~~~~I~~~~~f~~~~~~~~ 178 (310)
T smart00128 100 KANHLVYIKDVETFTVKTGMGGLWGNKGAVAVRFKLSD-TSFCFVNSHLAAGASNVEQRNQDYKTILRALSFPERAELSQ 178 (310)
T ss_pred ehhhcCccceeEeeeeeccccceeecCceEEEEEEEcC-cEEEEEeeccccccchhhhhHHHHHHHHHhcCCCCCccccc
Confidence 7443 22222222222 346888999999977 8999999999962 34678899999987652
Q ss_pred -CCCcEEEEecCCCCCCCCCcchhhhhHHHhhhhcCCCChhHHHHHHHhhCCceecccccCCCcceeEec--CCccccCC
Q 010500 347 -HGEAHILAGALNSLDETDYSSERWTDIVKYYEEMGKPTPKVEVMKFLKSKQYTDSKDFAGECESVVMIA--KGQSVQGT 423 (509)
Q Consensus 347 -~~~PvIL~GDFNs~p~s~~~~~~~~~i~~~~~~~G~~~~~~~~~~~L~~~glvDa~~~~~~~~~tT~~~--~g~~~~~t 423 (509)
....+|++||||...+..+.+...+.+... ....+...++............-|.+..-..+-||-+ .|.....+
T Consensus 179 ~~~d~~f~~GDlNyRi~~~~~~~v~~~i~~~--~~~~Ll~~DQL~~~~~~~~~f~~f~E~~I~F~PTYK~~~~~t~~Yd~ 256 (310)
T smart00128 179 FDHDVVFWFGDLNFRLDSPSYEEVRRKISKK--EFDDLLEKDQLNRQKEAGKVFKGFQEGPITFPPTYKYDSVGTETYDT 256 (310)
T ss_pred cccceEEEecCcceeecCCCHHHHHHHHhhC--cHHHHhhhhhHHHHhhcccccCcCccCCcCCCCCeeecCCCCccccC
Confidence 246799999999998865322222211100 0001111223332222221111122221122223322 23222222
Q ss_pred C---CCCCceEEEEeCCCCCCceeee-EEEEcCCCCCCCccceEEEEEecC
Q 010500 424 C---KYGTRVDYILASPNSPYKFVPG-SYSVFSSKGTSDHHIVKVDITKAQ 470 (509)
Q Consensus 424 ~---~~~~RIDyIf~S~~~~~kl~v~-s~~Vi~~~~~SDH~PV~adf~L~~ 470 (509)
. .-..-.|.||++.... .+... .|........|||.||.+.|.++.
T Consensus 257 ~~k~R~PsWcDRIL~~~~~~-~~~~~~~Y~s~~~~~~SDHkPV~~~f~v~~ 306 (310)
T smart00128 257 SEKKRVPAWCDRILYRSNGP-NLIQLSEYHSGMELTTSDHKPVFATFRLKV 306 (310)
T ss_pred cccccCcchhheehhhccCC-CceecccccCCCccCCcCcccccEEEEEEE
Confidence 2 2234579999986321 12222 255455556899999999999875
No 19
>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification]
Probab=99.11 E-value=3e-10 Score=116.02 Aligned_cols=230 Identities=17% Similarity=0.124 Sum_probs=125.4
Q ss_pred cccHHHHHHHHHccCCcEEEEcCccCCcccCCChHHHHHHHhCCcEEEeccCC-----------CCceeEEEEeccceee
Q 010500 224 VGSTRTVLEVLRELDADLLALQDVKAEEENSMKPLSDLAAALGMNYVFAESWA-----------PEYGNAVLSKWPIKRW 292 (509)
Q Consensus 224 ~~r~~~I~e~I~e~dpDVI~LQEV~~~~~~~~~~l~~La~~lG~~~~f~~s~~-----------g~~GvAILSR~PI~~~ 292 (509)
..|.+.|.++|..++|||+|||||+...-. +....+-..+||...|.+... .-.|++|+.+.-+...
T Consensus 59 ~~R~~~L~~EL~~Yn~Di~CLQEvd~~~~~--~fw~~~l~~~gY~~if~~k~~k~~~m~~~d~t~~dGc~if~k~~~~~s 136 (378)
T COG5239 59 SYRSRLLLQELLYYNADILCLQEVDAEDFE--DFWKDQLGKLGYDGIFIPKERKVKWMIDYDTTKVDGCAIFLKRFIDSS 136 (378)
T ss_pred HHHHHHHHHHHhccCCceeeeehhhhhHHH--HHHHHHhcccccceEEecCCCcccccccccccccceEEEEEEeccccc
Confidence 457888999999999999999999876322 122333345677776654321 3468899877621111
Q ss_pred e-Eee--------ecCC-----------------CCCce---EEEEEEEeCCccEEEEEEecCCCC--ChHHHHHHHHHH
Q 010500 293 K-VQK--------IFDD-----------------TDFRN---VLKATVDVPQIGEVNFHCTHLDHL--DENWRMKQMNAI 341 (509)
Q Consensus 293 ~-~~~--------l~~~-----------------~~~R~---~L~a~l~~~g~~~L~VintHL~~~--~~~~R~~Q~~~L 341 (509)
. .+. .+.+ ..... ++...+..+.|..+.+++||+++. .++...-|...+
T Consensus 137 k~~li~~~~~~f~~p~~~~er~r~t~~~lnri~e~~~~~w~~l~~~l~n~e~gd~~~va~Th~~w~~~~~dvk~iq~s~l 216 (378)
T COG5239 137 KLGLILAVTHLFWHPYGYYERFRQTYILLNRIGEKDNIAWVCLFVGLFNKEPGDTPYVANTHLPWDPKYRDVKLIQCSLL 216 (378)
T ss_pred hhhhhhhhhHhhcccceeehhhhHHHHHHHHHhhhhhcchhheeeeeccCCCCCceeEEeccccccCCCCchheehhhHH
Confidence 1 000 0110 11122 344555555568999999999872 455555666665
Q ss_pred HHHcC-------------------CCCcEEEEecCCCCCCCCCcchhhhhHHH-hhhhcCCCChhHHHHHHHhh-CCcee
Q 010500 342 IQSND-------------------HGEAHILAGALNSLDETDYSSERWTDIVK-YYEEMGKPTPKVEVMKFLKS-KQYTD 400 (509)
Q Consensus 342 ~~~L~-------------------~~~PvIL~GDFNs~p~s~~~~~~~~~i~~-~~~~~G~~~~~~~~~~~L~~-~glvD 400 (509)
++++. +..+..++||||+...+.. ++.++. .....+.... ..+.+... .++++
T Consensus 217 ~~~~k~~~~e~~~~d~~~~d~k~~~~~~~l~~gd~ns~~~s~v----y~~l~~~~~q~H~~~~~--~~~~lysvg~~~~h 290 (378)
T COG5239 217 YRELKKVLKEELNDDKEEGDIKSYPEVDILITGDFNSLRASLV----YKFLVTSQIQLHESLNG--RDFSLYSVGYKFVH 290 (378)
T ss_pred HHHHHHHhhhcCCcchhccccccCcccccccCCCccceeccee----hhhhhhHHHHhhhcccc--cchhhhcccccccC
Confidence 55431 1126799999999988752 233322 1111110000 01122211 34444
Q ss_pred ccccc--CC-Ccc-eeEecCCccccCCCCCCCceEEEEeCCCCCCceeeeEEEEcC------------CCCCCCccceEE
Q 010500 401 SKDFA--GE-CES-VVMIAKGQSVQGTCKYGTRVDYILASPNSPYKFVPGSYSVFS------------SKGTSDHHIVKV 464 (509)
Q Consensus 401 a~~~~--~~-~~~-tT~~~~g~~~~~t~~~~~RIDyIf~S~~~~~kl~v~s~~Vi~------------~~~~SDH~PV~a 464 (509)
..... +. +++ +|- -+..+...|||||+......+. .....+++ ...+|||.|+.+
T Consensus 291 ~~n~~~~~~~~~~~fTN--------~t~~~kG~iDYIfy~~~~~~~~-~~~l~~ve~e~~~k~~G~pn~~~pSdhipl~~ 361 (378)
T COG5239 291 PENLKSDNSKGELGFTN--------WTPGFKGVIDYIFYHGGLLTRQ-TGLLGVVEGEYASKVIGLPNMPFPSDHIPLLA 361 (378)
T ss_pred hhhcccCCCcCCccccc--------ccccccceeEEEEEecCcceee-eccccccccchhhhhcccCCCCCccccccchh
Confidence 43221 11 111 111 1334578999999998722111 11112222 235899999999
Q ss_pred EEEecC
Q 010500 465 DITKAQ 470 (509)
Q Consensus 465 df~L~~ 470 (509)
+|....
T Consensus 362 ef~~~~ 367 (378)
T COG5239 362 EFASDH 367 (378)
T ss_pred cccccc
Confidence 998766
No 20
>KOG0620 consensus Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins [Transcription]
Probab=98.99 E-value=9.9e-10 Score=114.89 Aligned_cols=141 Identities=18% Similarity=0.179 Sum_probs=82.0
Q ss_pred cCCCCCcccHHHHHHHHHccCCcEEEEcCccCCcccCCChHHHHHHHhCCcEEEecc-------CCCCceeEEEEe---c
Q 010500 218 TSSIASVGSTRTVLEVLRELDADLLALQDVKAEEENSMKPLSDLAAALGMNYVFAES-------WAPEYGNAVLSK---W 287 (509)
Q Consensus 218 ~~~~~~~~r~~~I~e~I~e~dpDVI~LQEV~~~~~~~~~~l~~La~~lG~~~~f~~s-------~~g~~GvAILSR---~ 287 (509)
........+...+.+.|..++||++|||||+...... ...|. ..||...|.+. .....|+||+-| +
T Consensus 43 ~~~~~w~~r~~~~~~ei~~~~ad~icLqev~~~~~~~---~p~l~-~~gY~g~~~~k~~~~~~~~~~~dGcaiffk~s~f 118 (361)
T KOG0620|consen 43 SWALSWEYRRQLLLEEILNYNADILCLQEVDRYHDFF---SPELE-ASGYSGIFIEKTRMGEVELEKIDGCAIFFKPSLF 118 (361)
T ss_pred hhhccHHHHHHHHHHHHhCCCcceeecchhhHHHHHc---cchhh-hcCCcceeecccccchhhcccCceeeeeecchHH
Confidence 3334456788999999999999999999993221111 12233 34888777662 334679999854 4
Q ss_pred cceeeeEeeecC-------------------CCCCceEEEEEEEeCCccEEE----EEEecCCC--CChHHHHHHHHHHH
Q 010500 288 PIKRWKVQKIFD-------------------DTDFRNVLKATVDVPQIGEVN----FHCTHLDH--LDENWRMKQMNAII 342 (509)
Q Consensus 288 PI~~~~~~~l~~-------------------~~~~R~~L~a~l~~~g~~~L~----VintHL~~--~~~~~R~~Q~~~L~ 342 (509)
.+.....+.+.. +..... ...++...+..+. ++|+|+.+ ..+..+.-|+..++
T Consensus 119 ~li~~~~i~~n~~~~~~~~~~~~~~~~~~~~d~~~~~--l~~L~~~~~~~~~~~~~~~n~h~~~~~~~~~vkl~qv~~l~ 196 (361)
T KOG0620|consen 119 QLIHSSAIELNQLALSRLPPNIAQLNRLTTLDNSGNK--LVSLKAELGNMVSLPHLLLNTHILWDLPYEDVKLFQVLTLL 196 (361)
T ss_pred hhhhhhhhhhHHHHHhhcchhHHHHHhhhccccccch--hhhhhhhcCCceeeccccccceeccCCCccchHHHHHHHHh
Confidence 443322222210 011111 1112211122333 35666654 45677777887776
Q ss_pred HHc----------------C---CCCcEEEEecCCCCCCCC
Q 010500 343 QSN----------------D---HGEAHILAGALNSLDETD 364 (509)
Q Consensus 343 ~~L----------------~---~~~PvIL~GDFNs~p~s~ 364 (509)
..+ . ...|+++|||||+.+.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~gdfNs~p~~~ 237 (361)
T KOG0620|consen 197 LELAPLSPEILKIYREGNLATRIASFPLLLCGDFNSTPLSP 237 (361)
T ss_pred hcccccchhhhhhhccccccccccccceeeeccccCCCCcc
Confidence 652 0 247899999999998875
No 21
>COG2374 Predicted extracellular nuclease [General function prediction only]
Probab=98.74 E-value=1e-07 Score=105.28 Aligned_cols=218 Identities=17% Similarity=0.177 Sum_probs=129.8
Q ss_pred CCCcccHHHHHHHHHccCCcEEEEcCccCCcccCCC--hH----HHHHHHhCC--cEEEeccC------CCCceeEEEEe
Q 010500 221 IASVGSTRTVLEVLRELDADLLALQDVKAEEENSMK--PL----SDLAAALGM--NYVFAESW------APEYGNAVLSK 286 (509)
Q Consensus 221 ~~~~~r~~~I~e~I~e~dpDVI~LQEV~~~~~~~~~--~l----~~La~~lG~--~~~f~~s~------~g~~GvAILSR 286 (509)
.+......+++..|..+++||++|-|+.+......+ .. ..|.+..|- +|.+.... ....+++++.|
T Consensus 498 ~e~~~Q~~k~v~ai~~ldaDV~GL~Eien~~~~~~s~~ai~~lV~~lna~~G~~~~y~~v~p~~~~~lgtD~I~vg~iY~ 577 (798)
T COG2374 498 EEFARQRAKIVTAILTLDADVLGLMEIENNGYGTDSGDAIAQLVNALNAKAGAGTRYAFVAPGRNGGLGTDAIRVGFIYK 577 (798)
T ss_pred hHHHHHHHHHHHHHhhcchhhheeeeeeccCCCCCcHHHHHHHHHHHHhhcCCCceEEEEecCccCCcCCCceeEEEEec
Confidence 345566789999999999999999999877432222 32 234444432 34443221 13445666655
Q ss_pred ccceeee-Eeeec-C----------CCCCceEEEEEEEeC-CccEEEEEEecCCCC----------------ChHHHHHH
Q 010500 287 WPIKRWK-VQKIF-D----------DTDFRNVLKATVDVP-QIGEVNFHCTHLDHL----------------DENWRMKQ 337 (509)
Q Consensus 287 ~PI~~~~-~~~l~-~----------~~~~R~~L~a~l~~~-g~~~L~VintHL~~~----------------~~~~R~~Q 337 (509)
-.-+... .-.+. . ....|.-+..+++.. ++..|.++.-||.++ ....|.+|
T Consensus 578 ~~~V~~~g~~~~~~~~a~~~v~~~~~~n~R~~laqtF~~~~~~ekfvvVvNHfkSKgs~~p~~gd~~dgQg~~~~~R~~~ 657 (798)
T COG2374 578 PSAVSLVGKAAIVDNDAFLGVGEIDDNNARPPLAQTFQDLSGGEKFVVVVNHFKSKGSDCPVDGDTQDGQGNSNQTRVRA 657 (798)
T ss_pred cceEEecccccccccccccccccccccccCcchhhhhhhccCCcEEEEEEeeecccCCCCCCcccccccccchhhHHHHH
Confidence 3222110 00010 0 012355566666543 346699999999762 13468899
Q ss_pred HHHHHHHcC------CCCcEEEEecCCCCCCCCCcchhhhhHHHhhhhcCCCChhHHHHHHHhhCCceecccccC-CCcc
Q 010500 338 MNAIIQSND------HGEAHILAGALNSLDETDYSSERWTDIVKYYEEMGKPTPKVEVMKFLKSKQYTDSKDFAG-ECES 410 (509)
Q Consensus 338 ~~~L~~~L~------~~~PvIL~GDFNs~p~s~~~~~~~~~i~~~~~~~G~~~~~~~~~~~L~~~glvDa~~~~~-~~~~ 410 (509)
+++|..|++ ...+++|+||||+..-++ .++.|++.||........ ..+.
T Consensus 658 AqaL~~~la~~~~~~~d~~~viLGD~N~y~~ed------------------------pI~~l~~aGy~~l~~~~~~~~~~ 713 (798)
T COG2374 658 AQALAAFLATNPTGKADADIVILGDFNDYAFED------------------------PIQALEGAGYMNLAARFHDAGDR 713 (798)
T ss_pred HHHHHHHHhhCcccccCCCEEEEeccchhhhcc------------------------HHHHHhhcCchhhhhhccCCCCc
Confidence 999999985 367899999999887654 455666666655433333 3455
Q ss_pred eeEecCCccccCCCCCCCceEEEEeCCCCCCc--------eee-----eEEE---------EcC---CCCCCCccceEEE
Q 010500 411 VVMIAKGQSVQGTCKYGTRVDYILASPNSPYK--------FVP-----GSYS---------VFS---SKGTSDHHIVKVD 465 (509)
Q Consensus 411 tT~~~~g~~~~~t~~~~~RIDyIf~S~~~~~k--------l~v-----~s~~---------Vi~---~~~~SDH~PV~ad 465 (509)
++|.+.| ....+||+|++.++..+ +.. ..|. ... ..-.|||-||++.
T Consensus 714 YSY~f~G--------~~gtLDhaLas~sl~~~v~~a~ewHINAdE~~~ldYn~~Fk~q~~~~~~~~~~fR~SDHDPvvvg 785 (798)
T COG2374 714 YSYVFNG--------QSGTLDHALASASLAAQVSGATEWHINADEPDALDYNLEFKGQNVSLYKTTNPFRASDHDPVVVG 785 (798)
T ss_pred eEEEECC--------ccchHhhhhhhhhhhhhccCceeeeecccccchhhhhhhhccccccccccCCccccCCCCCeEEE
Confidence 6665554 35679999998653211 100 0010 000 0137999999999
Q ss_pred EEecC
Q 010500 466 ITKAQ 470 (509)
Q Consensus 466 f~L~~ 470 (509)
|.|..
T Consensus 786 lnL~~ 790 (798)
T COG2374 786 LNLLG 790 (798)
T ss_pred EEecc
Confidence 99876
No 22
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B.
Probab=98.61 E-value=2.3e-07 Score=80.68 Aligned_cols=116 Identities=18% Similarity=0.255 Sum_probs=53.4
Q ss_pred EEEEEecCCCCChHHHHH---HHHHHHHHcCCCCcEEEEecCCCCCCCCCcchhhhhHHHhhhhcCCCChhHHHHHHHhh
Q 010500 319 VNFHCTHLDHLDENWRMK---QMNAIIQSNDHGEAHILAGALNSLDETDYSSERWTDIVKYYEEMGKPTPKVEVMKFLKS 395 (509)
Q Consensus 319 L~VintHL~~~~~~~R~~---Q~~~L~~~L~~~~PvIL~GDFNs~p~s~~~~~~~~~i~~~~~~~G~~~~~~~~~~~L~~ 395 (509)
+.|++++.+... .+.. ++..++...... ++|++||||+.... |....... .....+.+.+..
T Consensus 1 i~i~~vY~pp~~--~~~~~~~~l~~~~~~~~~~-~~Ii~GDFN~~~~~------w~~~~~~~------~~~~~l~~~~~~ 65 (119)
T PF14529_consen 1 ITIISVYAPPSS--EREEFFDQLRQLLKNLPPA-PIIIGGDFNAHHPN------WDSSNTNS------RRGEQLLDWLDS 65 (119)
T ss_dssp EEEEEEE--TTS---CHHHHHHHHHHHHCCTTS-SEEEEEE-----GG------GT-SCHHH------HHHHHHHHHHHH
T ss_pred CEEEEEECCCCc--cHHHHHHHHHHHHHhCCCC-CEEEEeECCCCchh------hhhccccc------hhHHHHHHHhhh
Confidence 568888887533 2222 333333333333 99999999995332 22110000 112346677778
Q ss_pred CCceecccccCCCcceeEecCCccccCCCCCCCceEEEEeCCCCCCceeeeEEEEcCCCCCCCccceE
Q 010500 396 KQYTDSKDFAGECESVVMIAKGQSVQGTCKYGTRVDYILASPNSPYKFVPGSYSVFSSKGTSDHHIVK 463 (509)
Q Consensus 396 ~glvDa~~~~~~~~~tT~~~~g~~~~~t~~~~~RIDyIf~S~~~~~kl~v~s~~Vi~~~~~SDH~PV~ 463 (509)
.++.++.. +...+||...+ ...+||+||++...... ...........|||+||+
T Consensus 66 ~~l~~~~~---~~~~~T~~~~~--------~~s~iD~~~~s~~~~~~---~~~~~~~~~~~SDH~~I~ 119 (119)
T PF14529_consen 66 HNLVDLNP---PGRPPTFISNS--------HGSRIDLILTSDNLLSW---CVWVISSDDSGSDHCPIT 119 (119)
T ss_dssp CTEEE------TT---SEEECC--------CEE--EEEEEECCGCCC---EEEEEETTSSSSSB--EE
T ss_pred ceeeeeec---CCCCCcccCCC--------CCceEEEEEECChHHhc---CcEEEeCCCCCCCccCCC
Confidence 88887632 12224443221 16799999999984321 123334445789999985
No 23
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.54 E-value=1.6e-06 Score=97.58 Aligned_cols=158 Identities=16% Similarity=0.071 Sum_probs=93.0
Q ss_pred CCCceEEEEEEEeCCccEEEEEEecCCC--CChHHHHHHHHHHHHHcC--------CCCcEEEEecCCCCCCCCCcchhh
Q 010500 301 TDFRNVLKATVDVPQIGEVNFHCTHLDH--LDENWRMKQMNAIIQSND--------HGEAHILAGALNSLDETDYSSERW 370 (509)
Q Consensus 301 ~~~R~~L~a~l~~~g~~~L~VintHL~~--~~~~~R~~Q~~~L~~~L~--------~~~PvIL~GDFNs~p~s~~~~~~~ 370 (509)
...++++..++.+.+ ..+.|+|.||.+ ..-++|......|.+-|. .+..+++|||||...+..+ +++.
T Consensus 658 tgNKGAVAIrf~~~~-TsfCFv~SHlAAG~snv~ERn~DY~tI~r~l~Fp~Gr~I~~HD~ifW~GDFNYRI~l~n-EEVr 735 (1080)
T KOG0566|consen 658 TGNKGAVAIRFVYHA-TSFCFVCSHLAAGQSNVEERNEDYKTIARKLRFPRGRMIFSHDYIFWLGDFNYRIDLSN-EEVR 735 (1080)
T ss_pred cCCCceEEEEEEecc-ccEEEEecccccccchHhhhhhhHHHHHHhccccCCccccCCceEEEecccceeecCCH-HHHH
Confidence 346889999999887 889999999986 346788888888988762 5567999999999887652 2221
Q ss_pred hhHHHhhhhcCCCChhHHHHHHHhhCCceecccccCCCc---ceeEec-CCccccCCC---CCCCceEEEEeCCCCCCce
Q 010500 371 TDIVKYYEEMGKPTPKVEVMKFLKSKQYTDSKDFAGECE---SVVMIA-KGQSVQGTC---KYGTRVDYILASPNSPYKF 443 (509)
Q Consensus 371 ~~i~~~~~~~G~~~~~~~~~~~L~~~glvDa~~~~~~~~---~tT~~~-~g~~~~~t~---~~~~RIDyIf~S~~~~~kl 443 (509)
..+.. .....+-..++..+.+..+. ++..++++. +-||-+ .|....+|. .-...-|.|++.+.. +
T Consensus 736 ~~v~~--~d~~kL~e~DQL~~q~~~G~---vF~gF~E~~ltF~PTYKyD~gTd~YDTSeK~R~PAWTDRIL~r~e~---~ 807 (1080)
T KOG0566|consen 736 RLVRN--QDLDKLLEYDQLTQQMNAGQ---VFPGFHEGQLTFPPTYKYDPGTDDYDTSEKCRTPAWTDRILWRGEK---L 807 (1080)
T ss_pred HHHHh--ccHHHHhhHHHHHHHHhcCc---ccccccccccccCCcccccCCCCccccchhccCccchhhheecccc---c
Confidence 11110 00111122233333332221 122222211 111211 122222222 223556999999873 3
Q ss_pred eeeEEEEcCCCCCCCccceEEEEEec
Q 010500 444 VPGSYSVFSSKGTSDHHIVKVDITKA 469 (509)
Q Consensus 444 ~v~s~~Vi~~~~~SDH~PV~adf~L~ 469 (509)
.+.+|...+ ...|||+||.|.|+..
T Consensus 808 ~~l~Y~~~e-l~~SDHRPV~A~~~a~ 832 (1080)
T KOG0566|consen 808 ELLSYKRAE-LKTSDHRPVYAIFRAE 832 (1080)
T ss_pred ccccccccc-ccccCCCceEEEEEEE
Confidence 455666544 4689999999999875
No 24
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=98.36 E-value=8.5e-06 Score=89.31 Aligned_cols=177 Identities=15% Similarity=0.087 Sum_probs=99.2
Q ss_pred CCceEEEEEEEeCCccEEEEEEecCCCC----ChHHHHHHHHHHHHHcC--------------CCCcEEEEecCCCCCCC
Q 010500 302 DFRNVLKATVDVPQIGEVNFHCTHLDHL----DENWRMKQMNAIIQSND--------------HGEAHILAGALNSLDET 363 (509)
Q Consensus 302 ~~R~~L~a~l~~~g~~~L~VintHL~~~----~~~~R~~Q~~~L~~~L~--------------~~~PvIL~GDFNs~p~s 363 (509)
..++++.+.+.+.+ ..|.|+|+||.+. ....|..++..|++.+. ....+|++||||.....
T Consensus 406 GNKGAVaIr~~l~~-Ts~cFVn~HLAAg~~~~~~~rRN~D~~~I~~~l~F~~~~~~~~~~~I~dhD~vFWlGDLNYRIdl 484 (621)
T PLN03191 406 GNKGSVSISMSLFQ-SRLCFVCSHLTSGHKDGAEQRRNADVYEIIRRTRFSSVLDTDQPQTIPSHDQIFWFGDLNYRLNM 484 (621)
T ss_pred ccceeEEEEEEEcC-cEEEEEEeccccccccchHHHHHHHHHHHHhccccCcccccCCCccccccceEEEecCccccccC
Confidence 46889999999987 8999999999862 13457788888876531 24579999999998875
Q ss_pred CCcchhhhhHHHhhhhc--CCCChhHHHHHHHhhCCceecccccCCCcceeEe-cCCccccC-----C---CCCCCceEE
Q 010500 364 DYSSERWTDIVKYYEEM--GKPTPKVEVMKFLKSKQYTDSKDFAGECESVVMI-AKGQSVQG-----T---CKYGTRVDY 432 (509)
Q Consensus 364 ~~~~~~~~~i~~~~~~~--G~~~~~~~~~~~L~~~glvDa~~~~~~~~~tT~~-~~g~~~~~-----t---~~~~~RIDy 432 (509)
.+. ++.++.... ..+-..+++...+..+....-|.+..-..+-||- ..|..... + .......|.
T Consensus 485 ~~~-----ev~~lI~~~~~~~LL~~DQL~~e~~~g~vF~GF~Eg~I~FpPTYKYd~gSd~Ydg~~~~Ts~KkR~PSWCDR 559 (621)
T PLN03191 485 LDT-----EVRKLVAQKRWDELINSDQLIKELRSGHVFDGWKEGPIKFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDR 559 (621)
T ss_pred CHH-----HHHHHHhhccHHHHHHHhHHHHHHHcCCccCCcccCCccCCCCcccccCCccccccccccccCccccchhhe
Confidence 421 121111110 0011223444444333222222211111111221 11111100 1 112345699
Q ss_pred EEeCCCCCCceeeeEEEEcCCCCCCCccceEEEEEecCCCCccCcccccccccccceeeecCCC
Q 010500 433 ILASPNSPYKFVPGSYSVFSSKGTSDHHIVKVDITKAQSDEKQNDVGRKRYKPKQKVVKISGSS 496 (509)
Q Consensus 433 If~S~~~~~kl~v~s~~Vi~~~~~SDH~PV~adf~L~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 496 (509)
||+.+.. +....|.. .+...|||.||.+.|.+.- .. ...++.|++..++.-.
T Consensus 560 ILykg~~---i~~l~Y~s-~ei~~SDHRPV~A~F~v~V-~~-------id~~k~q~~~~~~~a~ 611 (621)
T PLN03191 560 ILWLGKG---IKQLCYKR-SEIRLSDHRPVSSMFLVEV-EV-------FDHRKLQRALNVNSAA 611 (621)
T ss_pred EeecCCC---ceEeEecc-CCcccCCchhcceEEEEEE-Ee-------cCHHHHHhhhhcchhh
Confidence 9997653 56666765 3356899999999999865 21 3355666666655443
No 25
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms]
Probab=97.96 E-value=2.7e-05 Score=82.04 Aligned_cols=157 Identities=13% Similarity=0.055 Sum_probs=88.2
Q ss_pred CceEEEEEEEeCCccEEEEEEecCCC--CChHHHHHHHHHHHHHcC--------CCCcEEEEecCCCCCCCCCcchhhhh
Q 010500 303 FRNVLKATVDVPQIGEVNFHCTHLDH--LDENWRMKQMNAIIQSND--------HGEAHILAGALNSLDETDYSSERWTD 372 (509)
Q Consensus 303 ~R~~L~a~l~~~g~~~L~VintHL~~--~~~~~R~~Q~~~L~~~L~--------~~~PvIL~GDFNs~p~s~~~~~~~~~ 372 (509)
.++++.+++.... ..+.|++.||.+ .+-++|....+.+..-+. ....++++||||....+.+. +
T Consensus 152 nKGav~i~~~~~~-t~~cFv~shlaag~~N~eeR~~Dy~~I~~~i~f~~g~~I~~hdti~w~GDlNyRVts~~e-----~ 225 (460)
T COG5411 152 NKGAVAIRFNYER-TSFCFVNSHLAAGVNNIEERIFDYRSIASNICFSRGLRIYDHDTIFWLGDLNYRVTSTNE-----E 225 (460)
T ss_pred cccccceeEEeec-CCcEEEecchhcccccHHHHHHHHHHHHHheecCCCceecccceEEEecccCceeecCch-----h
Confidence 3567777777766 779999999986 456788888888887662 34569999999987765421 1
Q ss_pred HHHhhhhc-CCC---ChhHHHHHHHhhCCceecccccC-CCccee-EecCCccccCCCC----CCCceEEEEeCCCCCCc
Q 010500 373 IVKYYEEM-GKP---TPKVEVMKFLKSKQYTDSKDFAG-ECESVV-MIAKGQSVQGTCK----YGTRVDYILASPNSPYK 442 (509)
Q Consensus 373 i~~~~~~~-G~~---~~~~~~~~~L~~~glvDa~~~~~-~~~~tT-~~~~g~~~~~t~~----~~~RIDyIf~S~~~~~k 442 (509)
..++.... |.. ..+++....++.+...-.+.... .+.+|+ |...... ..+.+ +.+. |.||+++..
T Consensus 226 v~~~~~~~~g~~~~l~~~DqL~~e~~~g~~f~~f~E~~i~FpPTYKfd~gt~~-ydtsdk~RiPsWt-DRIl~~s~~--- 300 (460)
T COG5411 226 VRPEIASDDGRLDKLFEYDQLLWEMEVGNVFPGFKEPVITFPPTYKFDYGTDE-YDTSDKGRIPSWT-DRILYKSEQ--- 300 (460)
T ss_pred cchhhhCCcchhhhhhhhhhHhhhhcccccccceecccccCCCceEeecCCcc-ccccccccCCchh-hhhhhhccc---
Confidence 11111111 111 11122222221111100010000 111221 2221111 11111 2344 999998874
Q ss_pred eeeeEEEEcCCCCCCCccceEEEEEecC
Q 010500 443 FVPGSYSVFSSKGTSDHHIVKVDITKAQ 470 (509)
Q Consensus 443 l~v~s~~Vi~~~~~SDH~PV~adf~L~~ 470 (509)
+...+|..++....|||.||+|.|.++-
T Consensus 301 ~~p~sY~sip~l~~SDHrPV~a~~~~~i 328 (460)
T COG5411 301 LTPHSYSSIPHLMISDHRPVYATFRAKI 328 (460)
T ss_pred cccccccccCceeecCCCeEEEEEecce
Confidence 5677888777667999999999998764
No 26
>KOG1294 consensus Apurinic/apyrimidinic endonuclease and related enzymes [Replication, recombination and repair]
Probab=97.89 E-value=0.00011 Score=76.43 Aligned_cols=220 Identities=18% Similarity=0.112 Sum_probs=114.3
Q ss_pred HHHccCCcEEEEcCccCCcccCCChHHHHHHHhCCcEEE-ec--cCCCCceeEEEEec-cceeeeEee--ecCC-CCCce
Q 010500 233 VLRELDADLLALQDVKAEEENSMKPLSDLAAALGMNYVF-AE--SWAPEYGNAVLSKW-PIKRWKVQK--IFDD-TDFRN 305 (509)
Q Consensus 233 ~I~e~dpDVI~LQEV~~~~~~~~~~l~~La~~lG~~~~f-~~--s~~g~~GvAILSR~-PI~~~~~~~--l~~~-~~~R~ 305 (509)
++.+.-+|++|+||............. ..-+|...+ .. ...++.|++.+++. |+.....+. .++. ...+
T Consensus 85 ~~~~~l~d~~~~~~t~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~y~~~~~~~~~~p~~v~~~~~~~~s~h~~~g~- 160 (335)
T KOG1294|consen 85 EISSELRDLQCLLETKCTIDSGPCSHP---TEKGYTHSLLSCASKKDGYSGEIDYSKFKPLKVHYGFGAMGSDHRPVGR- 160 (335)
T ss_pred hccccchhhhhhhhccceeccCcceec---ccCCcccceeecccccCCccceeeeeecccceeeecccccCCccCccce-
Confidence 445566799999999765322211111 112332222 11 12355677777774 333222222 1111 1122
Q ss_pred EEEEEEEeCCccEEEEEEecCCCC-C----hHHHH-----HHHHHHHHHcC----CCCcEEEEecCCCCCCCCCcchhhh
Q 010500 306 VLKATVDVPQIGEVNFHCTHLDHL-D----ENWRM-----KQMNAIIQSND----HGEAHILAGALNSLDETDYSSERWT 371 (509)
Q Consensus 306 ~L~a~l~~~g~~~L~VintHL~~~-~----~~~R~-----~Q~~~L~~~L~----~~~PvIL~GDFNs~p~s~~~~~~~~ 371 (509)
++.+.+ ....++++|.+.. . ...+. ...+..+.... ...++++|||.|..+.....+ .
T Consensus 161 ~i~~e~-----e~~~l~~~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~v~~gd~nvs~~~i~~~---~ 232 (335)
T KOG1294|consen 161 VIIAEF-----EIFILINTYVPNIGGGLVNLVYRILDRWDKEIEEKRKKQSSSKNLKAPVVICGDLNVSHEEIDPS---K 232 (335)
T ss_pred EEEEee-----cceeeccccCcccccccchhhhhhhhhhHHHHHHHhhhccccccccCcceeccccccchhhcccc---c
Confidence 333333 3467888888742 1 11121 11222222222 235899999999987754210 0
Q ss_pred hHHHhhhh----cCCCChhHHHH-HHHhhCC-ceecccccCCCcc---eeEecCCccccCCCCCCCceEEEEeCCCCCCc
Q 010500 372 DIVKYYEE----MGKPTPKVEVM-KFLKSKQ-YTDSKDFAGECES---VVMIAKGQSVQGTCKYGTRVDYILASPNSPYK 442 (509)
Q Consensus 372 ~i~~~~~~----~G~~~~~~~~~-~~L~~~g-lvDa~~~~~~~~~---tT~~~~g~~~~~t~~~~~RIDyIf~S~~~~~k 442 (509)
.+..+... .|.....+... ..+.+.+ ++|+++...+... ++|.+.-. ......++|+||++++.....
T Consensus 233 ~~~~~~~~~~~~~~~t~e~R~~~~~~~~~~~~~iDt~r~~~~~~~~~~t~Wk~~~~--~r~~~~~~r~dy~~Vsk~~~n- 309 (335)
T KOG1294|consen 233 PLVSPAGNTLSNAGFTPEERDSFFAELLEKGPLIDTYRELHKDQKKAYTFWKYMPN--GRQRGHGERCDYILVSKPGPN- 309 (335)
T ss_pred cccccccCCcCCCCCCHHHhhhHHHhhccCCcceeehhhhcCCccccccchhhccc--cccCCCCCceeEEEecCcCCC-
Confidence 01122222 23334444444 4555566 9999998876543 44542111 122356899999999987543
Q ss_pred eeeeEEEEcCC-CCCCCccceEEEEEe
Q 010500 443 FVPGSYSVFSS-KGTSDHHIVKVDITK 468 (509)
Q Consensus 443 l~v~s~~Vi~~-~~~SDH~PV~adf~L 468 (509)
....+.+-.. ...|||.|+.+.|.+
T Consensus 310 -~~r~~~Ic~r~~~gsdh~pi~~~~~~ 335 (335)
T KOG1294|consen 310 -NGRRFYICSRPIHGSDHCPITLEFFL 335 (335)
T ss_pred -CCceeeeecCccCCCCCCCeeeeecC
Confidence 2345555554 679999999998853
No 27
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional
Probab=92.81 E-value=0.35 Score=49.37 Aligned_cols=63 Identities=14% Similarity=0.092 Sum_probs=46.7
Q ss_pred CCCceEEEEEEEeCCccEEEEEEecCCCC-------------ChHHHHHHHHHHHHHc----CCCCcEEEEecCCCCCCC
Q 010500 301 TDFRNVLKATVDVPQIGEVNFHCTHLDHL-------------DENWRMKQMNAIIQSN----DHGEAHILAGALNSLDET 363 (509)
Q Consensus 301 ~~~R~~L~a~l~~~g~~~L~VintHL~~~-------------~~~~R~~Q~~~L~~~L----~~~~PvIL~GDFNs~p~s 363 (509)
...++.+.+.+.+.+ ..+.|+|+||-+. ....|.+.+..++..+ .+..++++.||||...+.
T Consensus 65 wSRKGfmrtrw~i~~-t~fdfVNiHLFHDaSNl~A~~tSPSiYS~~RqrAL~~iL~r~~~~~~~~~~lF~fGDfNyRld~ 143 (356)
T PTZ00312 65 RSRKGFLLLSLRLGT-VVVNVLNVHLYNDDDNRVAAASSPSLYTGQRQEALLEAIAECSAFISPSDPLFIFGDFNVRLDG 143 (356)
T ss_pred ccccceEEEEEEECC-EEEEEEEeeccCCcchhhHHhcCCchhHHHHHHHHHHHHHHHhhccCCCCcEEEeccceeeecc
Confidence 346788999999988 8899999999751 1234656666666443 367899999999998765
Q ss_pred C
Q 010500 364 D 364 (509)
Q Consensus 364 ~ 364 (509)
.
T Consensus 144 ~ 144 (356)
T PTZ00312 144 H 144 (356)
T ss_pred c
Confidence 3
No 28
>KOG1976 consensus Inositol polyphosphate 5-phosphatase, type I [Lipid transport and metabolism]
Probab=91.28 E-value=0.5 Score=48.33 Aligned_cols=61 Identities=20% Similarity=0.231 Sum_probs=48.3
Q ss_pred CceEEEEEEEeCCccEEEEEEecCCCC-------------ChHHHHHHHHHHHHHcC----CCCcEEEEecCCCCCCCC
Q 010500 303 FRNVLKATVDVPQIGEVNFHCTHLDHL-------------DENWRMKQMNAIIQSND----HGEAHILAGALNSLDETD 364 (509)
Q Consensus 303 ~R~~L~a~l~~~g~~~L~VintHL~~~-------------~~~~R~~Q~~~L~~~L~----~~~PvIL~GDFNs~p~s~ 364 (509)
.++.+.+++.+.+ ..+.++|.||-+. ....|.+|+..+++.|. ....+++.||||...++.
T Consensus 156 rkg~~~~r~~I~~-k~fdfVN~hLFhD~snla~~~sspt~ys~~R~~al~~vL~el~~~~~~~~~~fVfGdfNfrLds~ 233 (391)
T KOG1976|consen 156 RKGFLLARFRIHG-KEFDFVNLHLFHDVSNLATKNSSPTKYSSKREQALEMVLKELDEEGLRNDAIFVFGDFNFRLDST 233 (391)
T ss_pred hccccceeEEEcC-ceeeeeehhhhcchhhhhhhcCChhhhhhhHHHHHHHHHHHHHhhccCceEEEEecccccccchH
Confidence 4567888999988 9999999999541 13468889999998874 344688999999998875
No 29
>KOG0565 consensus Inositol polyphosphate 5-phosphatase and related proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=65.53 E-value=19 Score=32.70 Aligned_cols=60 Identities=17% Similarity=0.116 Sum_probs=40.1
Q ss_pred ceEEEEEEEeCCccEEEEEEecCCCC--ChHH-HHHHHHHHHHHcC------C---------CCcEEEEecCCCCCCCC
Q 010500 304 RNVLKATVDVPQIGEVNFHCTHLDHL--DENW-RMKQMNAIIQSND------H---------GEAHILAGALNSLDETD 364 (509)
Q Consensus 304 R~~L~a~l~~~g~~~L~VintHL~~~--~~~~-R~~Q~~~L~~~L~------~---------~~PvIL~GDFNs~p~s~ 364 (509)
++.+.....+.+ ..+.+++.|+.+. ...+ |....+.+.+... . ..-||+.||+|......
T Consensus 47 kg~v~is~~~~~-~~~~~v~~hl~~~~~~~~~~r~~d~~~i~~~~~~~~~~~~~~~~~~~~~~D~v~w~GDlN~Rl~~~ 124 (145)
T KOG0565|consen 47 KGGVAISFVLSQ-TSFCFVISHLTSGVHKVYERRNEDYQEILNGLRFPSVSPASEPVISDGEHDTVIWLGDLNYRLSGP 124 (145)
T ss_pred CCeEEEEEEEcC-ceEEEEEecccccchhhHHHhhccHHHHHhhccccccCcccccccccccccEEEEecceeeeecCc
Confidence 445666666665 7899999999862 2334 5566666666431 1 23588999999988764
Done!