Query 010504
Match_columns 508
No_of_seqs 162 out of 295
Neff 5.1
Searched_HMMs 13730
Date Mon Mar 25 08:13:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010504.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010504hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2jaka1 a.118.1.20 (A:30-372) 100.0 3E-122 2E-126 946.6 33.8 342 94-437 1-343 (343)
2 d1qgra_ a.118.1.1 (A:) Importi 86.6 17 0.0012 36.0 19.8 89 372-464 389-479 (876)
3 d1u6gc_ a.118.1.2 (C:) Cullin- 82.4 8.1 0.00059 40.7 14.8 250 129-416 17-277 (1207)
4 d1qgra_ a.118.1.1 (A:) Importi 82.2 25 0.0018 34.5 19.9 160 304-470 83-252 (876)
5 d1q1sc_ a.118.1.1 (C:) Importi 78.3 16 0.0011 33.2 13.7 237 217-462 89-341 (434)
6 d2bpta1 a.118.1.1 (A:1-861) Im 75.7 38 0.0028 32.9 20.6 214 229-445 226-465 (861)
7 d1ibrb_ a.118.1.1 (B:) Importi 69.1 38 0.0028 30.1 18.3 160 304-470 82-251 (458)
8 d2bpta1 a.118.1.1 (A:1-861) Im 55.8 92 0.0067 30.0 18.8 79 382-463 588-667 (861)
9 d1eyha_ a.118.9.1 (A:) Epsin 1 54.5 24 0.0017 29.0 8.5 105 351-464 10-122 (144)
10 d1u6gc_ a.118.1.2 (C:) Cullin- 52.9 97 0.0071 31.9 15.1 198 228-440 4-216 (1207)
11 d1szaa_ a.118.9.4 (A:) PCF11 p 47.9 19 0.0014 29.7 6.8 83 337-419 31-116 (144)
12 d1wa5b_ a.118.1.1 (B:) Karyoph 39.9 1.4E+02 0.01 27.4 15.6 75 392-473 289-368 (503)
13 d1qbkb_ a.118.1.1 (B:) Karyoph 36.6 2.1E+02 0.015 28.5 21.5 205 227-459 519-730 (888)
14 d1q1sc_ a.118.1.1 (C:) Importi 33.9 1.5E+02 0.011 26.1 16.6 231 229-472 15-267 (434)
15 d1oksa_ a.8.5.1 (A:) RNA polym 27.2 12 0.00087 26.5 1.5 42 292-335 5-46 (54)
No 1
>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.7e-122 Score=946.57 Aligned_cols=342 Identities=61% Similarity=1.081 Sum_probs=324.2
Q ss_pred CCCCChhHhHHHHHHHHhcccccccc-cCCCCCchhhHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHhHhhcccCCCC
Q 010504 94 FRDVASFEKQNLLIRKLNLCCVLFDF-TDPTKNLKEKDVKRQTLLELVDFITSANGKFTETVMQEVIKMVSVNLFRSLSP 172 (508)
Q Consensus 94 ~~dv~~~e~~~Lf~~Kl~~C~~ifDF-sdp~~d~~~Ke~Kr~tL~EL~~~v~~~~~~l~e~~~~~i~~Mvs~NiFR~lPp 172 (508)
|+|||++||++||++||++||++||| +||++|+++|++||++|+||++|+++++++++|++++++++||++||||++||
T Consensus 1 l~d~~~~e~~~lf~~Kl~~C~~i~DF~~d~~~d~~~K~~K~~~L~el~~~~~~~~~~l~e~~~~~i~~Mi~~NifR~lPp 80 (343)
T d2jaka1 1 IRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPP 80 (343)
T ss_dssp CCCCC-CSCSHHHHHHHHHTTCCCCCSSCSSSSHHHHHHHHHHHHHHHHHHTTCCSCCCTTHHHHHHHHHHHHHCSCCCC
T ss_pred CCCCChHHHHHHHHHHHHHhCcccCCCCCccccHHHHHHHHHHHHHHHHHHccCCCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence 68999999999999999999999999 79999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCchhhHHHHHHHHHhcCCcCChHHhhccCCHHHHHHHhhcCCCCChhHHHHHHHHHH
Q 010504 173 QPRENKTLESFDLEEEEPLMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILH 252 (508)
Q Consensus 173 ~~~~~~~~~~~d~eedep~~epaWpHLqlVYeillrfv~s~~~d~k~ak~~id~~Fv~~Ll~lfdSeDpRERd~LKtiLH 252 (508)
.+++. .++||+|||||++||||||||+||++|+||++|+++|++.+++|||++||.+|+++|+|+||||||+||++||
T Consensus 81 ~~~~~--~~~~~~e~d~~~~e~sWpHL~lVY~ill~f~~s~~~~~~~~~~~id~~Fi~~Ll~lf~S~D~rER~~lk~~l~ 158 (343)
T d2jaka1 81 SSNPT--GAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLH 158 (343)
T ss_dssp -----------------CCCCTTHHHHHHHHHHHHHHHHCTTCCHHHHTTTSCHHHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred CCCcc--ccccCccccccccCCCCchHHHHHHHHHHHHhccccCchhHHhhCCHHHHHHHHHhcCCCChHHHHHHHHHHH
Confidence 97653 3479999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCChHHHHHHHHHHHHHhhhcccCCcChHHHHHHHHHHHhccCCCcHHHHHHHHHHHhhcCCCCCCccccchhH
Q 010504 253 RIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLIRALIPLHKPKCLAMYHQPL 332 (508)
Q Consensus 253 riYgKf~~~R~fIRk~Innif~~fiyEte~~nGIaELLeIlgSIInGFa~PLKeEHk~Fl~rvLiPLHk~~~~~~yh~qL 332 (508)
||||||+++|+|||++|+|+|++||||+++||||+|||||+|||||||++|||+||+.|+.++|+||||+++++.||+||
T Consensus 159 ~iy~kf~~~R~~Ir~~i~~if~~fi~e~~~~~gI~elLeil~sii~gf~~plkeeh~~f~~~vllPLhk~~~~~~y~~qL 238 (343)
T d2jaka1 159 RIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQL 238 (343)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHHHTSSCCCSCHHHHHHHHHHHHHTCCSSCCHHHHHHHHHTTGGGGTSGGGGGTHHHH
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHhccCcchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCcccHHHHHHHhhccCCCCCChHHHHHHHHHHHHHhhCChhHHHhhHHHHHHHHHHHhCCCcHHHHHHHH
Q 010504 333 SYCITQFVEKDCKLADTVIKGLLKYWPITNSSKEVMFLSELEEVLEATQPPEFQKCMVPLFRQIASCLSSSHFQVAERAL 412 (508)
Q Consensus 333 ~yci~qFveKDp~La~~vi~gLLk~WP~tns~KEv~FL~EleeiLe~~~~~eF~~i~~pLF~~la~Ci~S~hfqVAErAL 412 (508)
+||++||++|||+|+.++++||+||||+||++|||+||+||++||+.+++++|+++++|+|++||+|++|+|||||||||
T Consensus 239 ~~~v~~f~~kDp~l~~~~i~~llk~WP~t~~~Kev~FL~el~~il~~~~~~~f~~~~~~lf~~la~ci~S~h~qVAErAl 318 (343)
T d2jaka1 239 AYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERAL 318 (343)
T ss_dssp HHHHHHHHHHCGGGHHHHHHHHHHSSCSSCCTTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHH
T ss_pred HHHHHHHHhcCchhHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcchhHHHHHhhccccccccccH
Q 010504 413 YLWNNDHIENLIRQNRKVILPIIFP 437 (508)
Q Consensus 413 ~lWnNe~i~~li~~n~~~IlPii~p 437 (508)
++|+|++|+++|++|+++|+|+|+|
T Consensus 319 ~~w~N~~~~~li~~n~~~i~Pii~P 343 (343)
T d2jaka1 319 YYWNNEYIMSLISDNAAKILPIMFP 343 (343)
T ss_dssp GGGGCHHHHHHHHHTHHHHTTTSCC
T ss_pred HHHCCHHHHHHHHhCccceEeeeCC
Confidence 9999999999999999999999997
No 2
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.57 E-value=17 Score=35.97 Aligned_cols=89 Identities=13% Similarity=0.189 Sum_probs=58.0
Q ss_pred HHHHHHhhCChhHHHhhHHHHHHHHHHHhCCCcHHHHHHHHhhhcchhHHHHHhh--ccccccccccHHHHhhhcccchH
Q 010504 372 ELEEVLEATQPPEFQKCMVPLFRQIASCLSSSHFQVAERALYLWNNDHIENLIRQ--NRKVILPIIFPALEKNGCNHWNQ 449 (508)
Q Consensus 372 EleeiLe~~~~~eF~~i~~pLF~~la~Ci~S~hfqVAErAL~lWnNe~i~~li~~--n~~~IlPii~paL~~~s~~HWn~ 449 (508)
.+..+.+.+.+..+......++..+..++.++|..|..+|+... ..+...+.. .....++.+++.+...... +.
T Consensus 389 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d~~~~vr~~a~~~l--~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~ 464 (876)
T d1qgra_ 389 AFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTV--GRICELLPEAAINDVYLAPLLQCLIEGLSA--EP 464 (876)
T ss_dssp HHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHH--HHHHHHCGGGTSSTTTHHHHHHHHHHHTTS--CH
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHH--HHHHHHcchhhhhHHHhhhHHHHHHHHhcC--CH
Confidence 44555566677778888888999999999999999999988543 223332221 1234456667777765544 55
Q ss_pred HHHHHHHHHHHHHHh
Q 010504 450 VVQNLTVNVRKIFSE 464 (508)
Q Consensus 450 ~V~~la~~vlk~l~e 464 (508)
.|+..++.++.-+.+
T Consensus 465 ~v~~~~~~~l~~l~~ 479 (876)
T d1qgra_ 465 RVASNVCWAFSSLAE 479 (876)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 666666666655543
No 3
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.44 E-value=8.1 Score=40.70 Aligned_cols=250 Identities=14% Similarity=0.171 Sum_probs=141.4
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHhHhhcccCCCCCCCCCccccCCCCCCCCCCCCCCCchhhHHHHHHHH
Q 010504 129 KDVKRQTLLELVDFITSANGKFTETVMQEVIKMVSVNLFRSLSPQPRENKTLESFDLEEEEPLMDPAWPHLQIVYEFFLR 208 (508)
Q Consensus 129 Ke~Kr~tL~EL~~~v~~~~~~l~e~~~~~i~~Mvs~NiFR~lPp~~~~~~~~~~~d~eedep~~epaWpHLqlVYeillr 208 (508)
|+++-.++++|...++.....+++.....+++++ ++.+- ..++ + +. ...=.-|-.
T Consensus 17 ~d~R~ma~~dl~~~l~~~~~~~~~~~~~~i~~~l----l~~L~---D~~~-------~----Vq-------~~A~k~l~~ 71 (1207)
T d1u6gc_ 17 KDFRFMATNDLMTELQKDSIKLDDDSERKVVKMI----LKLLE---DKNG-------E----VQ-------NLAVKCLGP 71 (1207)
T ss_dssp HHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHH----HHHTT---CSSH-------H----HH-------HHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHhhcccccChHHHHHHHHHH----HHHhC---CCCH-------H----HH-------HHHHHHHHH
Confidence 5677899999999998888888888777777775 33331 1110 0 00 011122333
Q ss_pred HhcCCcCChHHhhccCCHHHHHHHhhcCCCCChhHHHHHHHHHHHHhcccc------CChHHHHHHHHHHHHHhhhcccC
Q 010504 209 FVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFM------VHRPFIRKAINNIFFRFIFETEK 282 (508)
Q Consensus 209 fv~s~~~d~k~ak~~id~~Fv~~Ll~lfdSeDpRERd~LKtiLHriYgKf~------~~R~fIRk~Innif~~fiyEte~ 282 (508)
++.. .... .-..++..|+..+-+.+...|+.--+.|+.+..... ..-..+-+.+.+.+...+-..+.
T Consensus 72 l~~~--~~~~-----~~~~l~~~L~~~l~~~~~~~r~~~~~~L~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 144 (1207)
T d1u6gc_ 72 LVSK--VKEY-----QVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQED 144 (1207)
T ss_dssp HHTT--SCHH-----HHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSC
T ss_pred HHHh--CcHh-----hHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhcCCCC
Confidence 3321 1221 223456678888888888889987666666654432 11222333344445555544444
Q ss_pred CcChHHHHHHHHHHHhccCCCcHHHHHHHHHHHhhcCCCCCCccccchhHHHHHHHHHHh-----CcccHHHHHHHhhcc
Q 010504 283 HNGIAELLEVLGSIINGFALPLKEEHKLFLIRALIPLHKPKCLAMYHQPLSYCITQFVEK-----DCKLADTVIKGLLKY 357 (508)
Q Consensus 283 ~nGIaELLeIlgSIInGFa~PLKeEHk~Fl~rvLiPLHk~~~~~~yh~qL~yci~qFveK-----Dp~La~~vi~gLLk~ 357 (508)
...-.+.+++++.+++-|..-+.+.|... ...|+|....+...+- .-=..|+...+.- -..+...++.++...
T Consensus 145 ~~v~~~al~~l~~l~~~~g~~l~~~~~~i-l~~l~~~l~~~~~~vR-~~A~~~l~~l~~~~~~~~~~~~~~~ll~~l~~~ 222 (1207)
T d1u6gc_ 145 VSVQLEALDIMADMLSRQGGLLVNFHPSI-LTCLLPQLTSPRLAVR-KRTIIALGHLVMSCGNIVFVDLIEHLLSELSKN 222 (1207)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSCTTTHHHH-HHHHGGGGGCSSHHHH-HHHHHHHHHHTTTC----CTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHH-HHHHHHHhCCCCHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHccC
Confidence 44557899999999987765555556555 4566666655544331 1123444433321 123555566655532
Q ss_pred CCCCCChHHHHHHHHHHHHHhhCChhHHHhhHHHHHHHHHHHhCCCcHHHHHHHHhhhc
Q 010504 358 WPITNSSKEVMFLSELEEVLEATQPPEFQKCMVPLFRQIASCLSSSHFQVAERALYLWN 416 (508)
Q Consensus 358 WP~tns~KEv~FL~EleeiLe~~~~~eF~~i~~pLF~~la~Ci~S~hfqVAErAL~lWn 416 (508)
......+ ..+.=+..+.... +..|.+....++..+-+++.+.+.+|-|.|+..+.
T Consensus 223 -~~~~~~~--~~~~~l~~l~~~~-~~~~~~~l~~i~~~l~~~l~~~~~~~r~~al~~l~ 277 (1207)
T d1u6gc_ 223 -DSMSTTR--TYIQCIAAISRQA-GHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFE 277 (1207)
T ss_dssp -CSSCSCT--THHHHHHHHHHHS-SGGGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHH
T ss_pred -CCHHHHH--HHHHHHHHHHHHc-chhhHHHHHHHHHHHHHHhcCccHHHHHHHHHHHH
Confidence 1111112 2233344444443 44566656667777888889999999888887653
No 4
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.18 E-value=25 Score=34.54 Aligned_cols=160 Identities=9% Similarity=0.054 Sum_probs=92.8
Q ss_pred cHHHHHHHHHHHhhcCCCCCCccccchhHHHHHHHHHHhC------cccHHHHHHHhhccCCCCCChHHH--HHHHHHHH
Q 010504 304 LKEEHKLFLIRALIPLHKPKCLAMYHQPLSYCITQFVEKD------CKLADTVIKGLLKYWPITNSSKEV--MFLSELEE 375 (508)
Q Consensus 304 LKeEHk~Fl~rvLiPLHk~~~~~~yh~qL~yci~qFveKD------p~La~~vi~gLLk~WP~tns~KEv--~FL~Elee 375 (508)
+.++-|..++..|+.+-..... -..+++.|+...+..| |.|...++..+.. .+....+ .-|.-+..
T Consensus 83 i~~~~k~~ik~~ll~~l~~~~~--~~~~~a~~i~~i~~~~~p~~~Wpeli~~L~~~l~~----~~~~~~~~~~~l~~l~~ 156 (876)
T d1qgra_ 83 IDANARREVKNYVLHTLGTETY--RPSSASQCVAGIACAEIPVNQWPELIPQLVANVTN----PNSTEHMKESTLEAIGY 156 (876)
T ss_dssp SCHHHHHHHHHHHHHHTTTCCS--SSCHHHHHHHHHHHHHGGGTCCTTHHHHHHHHHHC----TTCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHCCccccHHHHHHHHHHhcC----CCCcHHHHHHHHHHHHH
Confidence 4456666666666666555442 3456888887775432 4455555544432 1221111 24555777
Q ss_pred HHhhCChhHHHhhHHHHHHHHHHHhCC--CcHHHHHHHHhhhcchhHHHHHhhccccccccccHHHHhhhcccchHHHHH
Q 010504 376 VLEATQPPEFQKCMVPLFRQIASCLSS--SHFQVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQN 453 (508)
Q Consensus 376 iLe~~~~~eF~~i~~pLF~~la~Ci~S--~hfqVAErAL~lWnNe~i~~li~~n~~~IlPii~paL~~~s~~HWn~~V~~ 453 (508)
+.+.+.++.+......++..+-..+.+ +...|...|+..+.+---.---........+.++..+... ..+-+..++.
T Consensus 157 i~~~~~~~~~~~~~~~il~~i~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~~-~~~~~~~v~~ 235 (876)
T d1qgra_ 157 ICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEA-TQCPDTRVRV 235 (876)
T ss_dssp HHHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHH-TTCSSHHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHH-hcCCCHHHHH
Confidence 777788888888777788888888865 3467888887655332110000011222334445555543 3455778898
Q ss_pred HHHHHHHHHHhhCHHHH
Q 010504 454 LTVNVRKIFSEIDPELF 470 (508)
Q Consensus 454 la~~vlk~l~e~D~~lf 470 (508)
.++..+.-+.+..++.+
T Consensus 236 ~~~~~l~~l~~~~~~~~ 252 (876)
T d1qgra_ 236 AALQNLVKIMSLYYQYM 252 (876)
T ss_dssp HHHHHHHHHHHHSGGGC
T ss_pred HHHHHHHHHHHHhHHHH
Confidence 88888888877655443
No 5
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.27 E-value=16 Score=33.19 Aligned_cols=237 Identities=12% Similarity=0.101 Sum_probs=111.8
Q ss_pred hHHhhccCCHHHHHHHhhcCCCCChhHHHHHHHHHHHHhccccCChHHHHHH-HHHHHHHhhhcccCCc-ChH---HHHH
Q 010504 217 AKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKA-INNIFFRFIFETEKHN-GIA---ELLE 291 (508)
Q Consensus 217 ~k~ak~~id~~Fv~~Ll~lfdSeDpRERd~LKtiLHriYgKf~~~R~fIRk~-Innif~~fiyEte~~n-GIa---ELLe 291 (508)
+...+..++...+..|+.++.++|+.-|+..-..|.++-..-...|..++.. .-..+...+....... ... .+..
T Consensus 89 ~~~~~~i~~~~~i~~l~~~L~~~~~~~~~~a~~~L~nl~~~~~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 168 (434)
T d1q1sc_ 89 SEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTW 168 (434)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHH
T ss_pred hhhhhHhhhccchhhhhhccccCCHHHHHHHHHHHHHHhccchHHHHHHHHhhhhhHHHHHHHhcccccchHHHHHHHHH
Confidence 3344455666678889999999999999888888877765433444444331 2223444332221111 121 2222
Q ss_pred HHHHHHhccCCCcHHHHHHHHHHHhhcCCCCCCccccchhHHHHHHHHHHhCcccHHH-----HHHHhhccCCCCCChHH
Q 010504 292 VLGSIINGFALPLKEEHKLFLIRALIPLHKPKCLAMYHQPLSYCITQFVEKDCKLADT-----VIKGLLKYWPITNSSKE 366 (508)
Q Consensus 292 IlgSIInGFa~PLKeEHk~Fl~rvLiPLHk~~~~~~yh~qL~yci~qFveKDp~La~~-----vi~gLLk~WP~tns~KE 366 (508)
.+..+..+.....+.+...-+..+|+.|.+...-. .......|+......++..... ++..|++++-..+..-.
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~-~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~ 247 (434)
T d1q1sc_ 169 TLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPE-VLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIV 247 (434)
T ss_dssp HHHHHTCCCTTCCCHHHHHHHHHHHHHHTTCSCHH-HHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHH
T ss_pred HHHHHhhcccccchhhhhhhHHHHHHHHHhccccc-hhhhHHhhhcccchhhhhhHHHHhhcccchhcccccccchhhhh
Confidence 33333333322233333333345556655543322 2223444555444333322221 23334444444444333
Q ss_pred HHHHHHHHHHHhhCChhHHHhh-HHHHHHHHHHHhCCCcHHHHHHHHhhhcc-----hhHHHHHhhccccccccccHHHH
Q 010504 367 VMFLSELEEVLEATQPPEFQKC-MVPLFRQIASCLSSSHFQVAERALYLWNN-----DHIENLIRQNRKVILPIIFPALE 440 (508)
Q Consensus 367 v~FL~EleeiLe~~~~~eF~~i-~~pLF~~la~Ci~S~hfqVAErAL~lWnN-----e~i~~li~~n~~~IlPii~paL~ 440 (508)
..-+.-|..+.. ..+.....+ -..+...+..+++++.-.|.+.|+....| +.....+.+ ..++|.++..+.
T Consensus 248 ~~al~~l~~l~~-~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~--~~~i~~li~~l~ 324 (434)
T d1q1sc_ 248 TPALRAIGNIVT-GTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVN--HGLVPFLVGVLS 324 (434)
T ss_dssp HHHHHHHHHHTT-SCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHH--TTCHHHHHHHHH
T ss_pred hchhhhhhhHHh-hhhHHHHHHHhccccchHHHhhcccchhhhHHHHHHHhhhccccchhHHHHhh--hhhHHHHHHHHh
Confidence 333333333321 111111111 12344567778889888888887765432 333333322 224555444443
Q ss_pred hhhcccchHHHHHHHHHHHHHH
Q 010504 441 KNGCNHWNQVVQNLTVNVRKIF 462 (508)
Q Consensus 441 ~~s~~HWn~~V~~la~~vlk~l 462 (508)
+-+..|+..+..++.-+
T Consensus 325 -----~~~~~v~~~a~~~l~nl 341 (434)
T d1q1sc_ 325 -----KADFKTQKEAAWAITNY 341 (434)
T ss_dssp -----SSCHHHHHHHHHHHHHH
T ss_pred -----ccChHHHHHHHHHHHHH
Confidence 33555666666555433
No 6
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=75.72 E-value=38 Score=32.91 Aligned_cols=214 Identities=11% Similarity=0.127 Sum_probs=113.2
Q ss_pred HHHHhhcCCCCChhHHHHHHHHHHHHhccccC-ChHHHHHHHHHHHHHhhhcccCCcChHHHHHHHHHHHhcc-------
Q 010504 229 VLKLLDLFDSEDPREREYLKTILHRIYGKFMV-HRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGF------- 300 (508)
Q Consensus 229 v~~Ll~lfdSeDpRERd~LKtiLHriYgKf~~-~R~fIRk~Innif~~fiyEte~~nGIaELLeIlgSIInGF------- 300 (508)
+.-|...+.++|+.-|...-..|..|..++.. ..+++.+.+..+........+ ..-....++++.++....
T Consensus 226 ~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~l~~l~~~~~~~~~-~~v~~~~~~~l~~l~~~~~~~~~~~ 304 (861)
T d2bpta1 226 MQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPN-DKVASMTVEFWSTICEEEIDIAYEL 304 (861)
T ss_dssp HHHHHHHHTCSCHHHHHHHHHHHHHHHHHHGGGCHHHHHHTHHHHHHHHTTCSS-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44466788899999998877777777665543 456666666555444332211 111234455665543210
Q ss_pred ------C---CCcHHHHHHHHHHHhhcCCCCCCcc----cc--chhHHHHHHHHHHhCcc-cHHHHHHHhhccCCCCCCh
Q 010504 301 ------A---LPLKEEHKLFLIRALIPLHKPKCLA----MY--HQPLSYCITQFVEKDCK-LADTVIKGLLKYWPITNSS 364 (508)
Q Consensus 301 ------a---~PLKeEHk~Fl~rvLiPLHk~~~~~----~y--h~qL~yci~qFveKDp~-La~~vi~gLLk~WP~tns~ 364 (508)
. ..+-..+...+...++.+.....-. .+ ......|+.......+. +...++..+....-..+..
T Consensus 305 ~~~~~~~~~~~~~~~~~l~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (861)
T d2bpta1 305 AQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNITADNWR 384 (861)
T ss_dssp HHCTTCSCCCCCHHHHHHHHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHTTCSSHH
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHhhcchhhhhhhcchhhhhhhhHHHH
Confidence 0 0011112122222333332222111 11 11122333333333222 3444455555555556655
Q ss_pred HHHHHHHHHHHHHhhCChhHHHhhHHHHHHHHHHHhCCCcHHHHHHHHhhhcchhHHHHHhhc--cccccccccHHHHhh
Q 010504 365 KEVMFLSELEEVLEATQPPEFQKCMVPLFRQIASCLSSSHFQVAERALYLWNNDHIENLIRQN--RKVILPIIFPALEKN 442 (508)
Q Consensus 365 KEv~FL~EleeiLe~~~~~eF~~i~~pLF~~la~Ci~S~hfqVAErAL~lWnNe~i~~li~~n--~~~IlPii~paL~~~ 442 (508)
.....+.-+..+.+.+...........++..+..++.++|..|-+.|+.... .+...+... ....++.+++.+...
T Consensus 385 ~~~~a~~~l~~i~~~~~~~~~~~~l~~~l~~l~~~l~d~~~~vr~~a~~~l~--~l~~~~~~~~~~~~~~~~ll~~l~~~ 462 (861)
T d2bpta1 385 NREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIG--RIADSVAESIDPQQHLPGVVQACLIG 462 (861)
T ss_dssp HHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHH--HHHHHHGGGSCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhcCcchhhhhHHHHHHH--HHHHHhchhhhhHHhhhhhhHHHHhc
Confidence 5555666677777777777777777888999999999999999888876553 333333322 234455566666554
Q ss_pred hcc
Q 010504 443 GCN 445 (508)
Q Consensus 443 s~~ 445 (508)
...
T Consensus 463 ~~~ 465 (861)
T d2bpta1 463 LQD 465 (861)
T ss_dssp HTS
T ss_pred ccc
Confidence 433
No 7
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.12 E-value=38 Score=30.08 Aligned_cols=160 Identities=8% Similarity=0.028 Sum_probs=89.2
Q ss_pred cHHHHHHHHHHHhhcCCCCCCccccchhHHHHHHHHHHh------CcccHHHHHHHhhccCCCCCChHHHHHHHHHHHHH
Q 010504 304 LKEEHKLFLIRALIPLHKPKCLAMYHQPLSYCITQFVEK------DCKLADTVIKGLLKYWPITNSSKEVMFLSELEEVL 377 (508)
Q Consensus 304 LKeEHk~Fl~rvLiPLHk~~~~~~yh~qL~yci~qFveK------Dp~La~~vi~gLLk~WP~tns~KEv~FL~EleeiL 377 (508)
+.++-+..+...|+..-....- -..++++|+...+.. -|.+...++..+..- ..+..-....+.-+..+.
T Consensus 82 l~~~~~~~i~~~ll~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~l~~l~~~~ 157 (458)
T d1ibrb_ 82 IDANARREVKNYVLQTLGTETY--RPSSASQCVAGIACAEIPVNQWPELIPQLVANVTNP--NSTEHMKESTLEAIGYIC 157 (458)
T ss_dssp SCHHHHHHHHHHHHHHTTCCCS--SSCSHHHHHHHHHHHHGGGTCCTTHHHHHHHHHHCT--TCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccCCCcH--HHHHHHHHHHHHHHHhCCcccCcchhHHHHHHHHhh--cchHHHHHHHHHHHHHHH
Confidence 4455555555555554443321 233466666655332 245555555555431 222222234677788888
Q ss_pred hhCChhHHHhhHHHHHHHHHHHhCCCc--HHHHHHHHhhhcch--hHHHHHhhccccccccccHHHHhhhcccchHHHHH
Q 010504 378 EATQPPEFQKCMVPLFRQIASCLSSSH--FQVAERALYLWNND--HIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQN 453 (508)
Q Consensus 378 e~~~~~eF~~i~~pLF~~la~Ci~S~h--fqVAErAL~lWnNe--~i~~li~~n~~~IlPii~paL~~~s~~HWn~~V~~ 453 (508)
+...+..+......++..+..++.+.+ -+|-..|+....+= .+.. ........+.+.+.+......+ +..++.
T Consensus 158 ~~~~~~~~~~~~~~il~~~~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~-~~~~~~ 234 (458)
T d1ibrb_ 158 QDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKA--NFDKESERHFIMQVVCEATQCP-DTRVRV 234 (458)
T ss_dssp HHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHH--HHTSHHHHHHHHHHHHHHTTCS-SHHHHH
T ss_pred hhccchhhhhhHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHhhhh--hhhhHHHHHHhHhhHHHHhcCC-CHHHHH
Confidence 888888888888888899999987643 45655555322111 0100 1122334455566666554444 566777
Q ss_pred HHHHHHHHHHhhCHHHH
Q 010504 454 LTVNVRKIFSEIDPELF 470 (508)
Q Consensus 454 la~~vlk~l~e~D~~lf 470 (508)
.+..++..+.+..++.+
T Consensus 235 ~~~~~l~~i~~~~~~~~ 251 (458)
T d1ibrb_ 235 AALQNLVKIMSLYYQYM 251 (458)
T ss_dssp HHHHHHHHHHHHCGGGC
T ss_pred HHHHHHHHHHHHhHHHH
Confidence 77777777776655443
No 8
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=55.84 E-value=92 Score=29.98 Aligned_cols=79 Identities=14% Similarity=0.084 Sum_probs=41.2
Q ss_pred hhHHHhhHHHHHHHHHHHhCC-CcHHHHHHHHhhhcchhHHHHHhhccccccccccHHHHhhhcccchHHHHHHHHHHHH
Q 010504 382 PPEFQKCMVPLFRQIASCLSS-SHFQVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQNLTVNVRK 460 (508)
Q Consensus 382 ~~eF~~i~~pLF~~la~Ci~S-~hfqVAErAL~lWnNe~i~~li~~n~~~IlPii~paL~~~s~~HWn~~V~~la~~vlk 460 (508)
+.++.....+++..+-+++.. ....|-+.|+..+. .+...+.++-...++.++|.|..... +=+..|+..|..++.
T Consensus 588 ~~~~~~~~~~l~~~l~~~l~~~~~~~v~~~~l~~l~--~l~~~~~~~~~~~l~~i~p~l~~~l~-~~~~~v~~~a~~~l~ 664 (861)
T d2bpta1 588 PSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAIS--ALAASLGKGFEKYLETFSPYLLKALN-QVDSPVSITAVGFIA 664 (861)
T ss_dssp GGGTGGGHHHHHHHHHHHHHSTTGGGTHHHHHHHHH--HHHHHHGGGGHHHHHHHHHHHHHHHH-CTTSHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhhhcccCCchhHHHHHHHHHH--HHHHHhhHHHHHHHHHHhhHHHHHhC-CCCHHHHHHHHHHHH
Confidence 455666677777777777755 33456667776663 34444444433333344444443321 123455555555554
Q ss_pred HHH
Q 010504 461 IFS 463 (508)
Q Consensus 461 ~l~ 463 (508)
-+.
T Consensus 665 ~i~ 667 (861)
T d2bpta1 665 DIS 667 (861)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 9
>d1eyha_ a.118.9.1 (A:) Epsin 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=54.53 E-value=24 Score=29.04 Aligned_cols=105 Identities=11% Similarity=0.218 Sum_probs=63.8
Q ss_pred HHHhhccCCCCCChHHHHHHHHHHHHHhhC-ChhHHHhhHHHHHHHHHHHhCCCcHHHHHHHHhhhc------chhHHHH
Q 010504 351 IKGLLKYWPITNSSKEVMFLSELEEVLEAT-QPPEFQKCMVPLFRQIASCLSSSHFQVAERALYLWN------NDHIENL 423 (508)
Q Consensus 351 i~gLLk~WP~tns~KEv~FL~EleeiLe~~-~~~eF~~i~~pLF~~la~Ci~S~hfqVAErAL~lWn------Ne~i~~l 423 (508)
|+.--.+=|...+.|. +.+|+..+ +...+..|+.-|++||.. .+.+-.|+-.||.+.. ++.++.-
T Consensus 10 v~~ATs~d~~~p~~k~------~~~I~~~t~~~~~~~~i~~~L~kRl~~--~~k~Wrvv~K~L~ll~~Ll~~G~~~~v~~ 81 (144)
T d1eyha_ 10 VREATSNDPWGPSSSL------MSEIADLTYNVVAFSEIMSMIWKRLND--HGKNWRHVYKAMTLMEYLIKTGSERVSQQ 81 (144)
T ss_dssp HHHHTCSSSSCCCHHH------HHHHHHHTTSHHHHHHHHHHHHHHHSC--CGGGHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHcCCCCCCCCHHH------HHHHHHHhcChhhHHHHHHHHHHHHhc--CCCchhHHHHHHHHHHHHHHcCCHHHHHH
Confidence 3333444444445553 45556555 566788888888877742 2246789999987763 4556655
Q ss_pred Hhhcccccccc-ccHHHHhhhcccchHHHHHHHHHHHHHHHh
Q 010504 424 IRQNRKVILPI-IFPALEKNGCNHWNQVVQNLTVNVRKIFSE 464 (508)
Q Consensus 424 i~~n~~~IlPi-i~paL~~~s~~HWn~~V~~la~~vlk~l~e 464 (508)
+..+...|-.. -|.-.. ..-..|...||..|..++++|.+
T Consensus 82 ~~~~~~~i~~l~~f~~~d-~~g~d~g~~VR~kA~~l~~Ll~d 122 (144)
T d1eyha_ 82 CKENMYAVQTLKDFQYVD-RDGKDQGVNVREKAKQLVALLRD 122 (144)
T ss_dssp HHHTHHHHHGGGGCCCBC-TTSCBCHHHHHHHHHHHHHHHHC
T ss_pred HHHhHHHHHhhhcCcccC-ccccchhHHHHHHHHHHHHHhcC
Confidence 55555444321 111111 12357888999999999999875
No 10
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.87 E-value=97 Score=31.93 Aligned_cols=198 Identities=16% Similarity=0.190 Sum_probs=99.1
Q ss_pred HHHHHhhcCCCCChhHHHHHHHHHHHHhcc--ccCChHHHHHHHHHHHHHhhhcccCCcC-h-HHHHHHHHHHHhccCCC
Q 010504 228 FVLKLLDLFDSEDPREREYLKTILHRIYGK--FMVHRPFIRKAINNIFFRFIFETEKHNG-I-AELLEVLGSIINGFALP 303 (508)
Q Consensus 228 Fv~~Ll~lfdSeDpRERd~LKtiLHriYgK--f~~~R~fIRk~Innif~~fiyEte~~nG-I-aELLeIlgSIInGFa~P 303 (508)
.|..||+-+.|+||+.|-.--.-|+..-.+ +-..-...|+.+ +.+++.+ ++.|| | ......||.+++-
T Consensus 4 ~~~~ll~k~~~~D~d~R~ma~~dl~~~l~~~~~~~~~~~~~~i~-~~ll~~L---~D~~~~Vq~~A~k~l~~l~~~---- 75 (1207)
T d1u6gc_ 4 HISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVV-KMILKLL---EDKNGEVQNLAVKCLGPLVSK---- 75 (1207)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHH-HHHHHHT---TCSSHHHHHHHHHHHHHHHTT----
T ss_pred hHHHHHHhcCCCCHhHHHHHHHHHHHHHhhcccccChHHHHHHH-HHHHHHh---CCCCHHHHHHHHHHHHHHHHh----
Confidence 477899999999999996544444444322 111223356655 4445544 23333 4 3346778887754
Q ss_pred cHHHHHHHHHHHhhcCCCCCCccccchhHHHHHHHHHHh------CcccHHHHH----HHhhccCCCC-CChHHHHHHHH
Q 010504 304 LKEEHKLFLIRALIPLHKPKCLAMYHQPLSYCITQFVEK------DCKLADTVI----KGLLKYWPIT-NSSKEVMFLSE 372 (508)
Q Consensus 304 LKeEHk~Fl~rvLiPLHk~~~~~~yh~qL~yci~qFveK------Dp~La~~vi----~gLLk~WP~t-ns~KEv~FL~E 372 (508)
++++....+...|+..-..+.-.. ..--+.|+...+.. +..+...++ ..+...-... +..-...-+.-
T Consensus 76 ~~~~~~~~l~~~L~~~l~~~~~~~-r~~~~~~L~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~al~~ 154 (1207)
T d1u6gc_ 76 VKEYQVETIVDTLCTNMLSDKEQL-RDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDI 154 (1207)
T ss_dssp SCHHHHHHHHHHHHHHTTCSSSHH-HHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred CcHhhHHHHHHHHHHHhcCCchhh-hHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence 345555555666665443332221 11122333333322 222333333 2333322222 22222334555
Q ss_pred HHHHHhhCChhHHHhhHHHHHHHHHHHhCCCcHHHHHHHHhhhcchhHHHHHhhccccccccccHHHH
Q 010504 373 LEEVLEATQPPEFQKCMVPLFRQIASCLSSSHFQVAERALYLWNNDHIENLIRQNRKVILPIIFPALE 440 (508)
Q Consensus 373 leeiLe~~~~~eF~~i~~pLF~~la~Ci~S~hfqVAErAL~lWnNe~i~~li~~n~~~IlPii~paL~ 440 (508)
+.+++....+ .+......+...+-.++++++..|-.||+... -.++.......++-+++.+.
T Consensus 155 l~~l~~~~g~-~l~~~~~~il~~l~~~l~~~~~~vR~~A~~~l-----~~l~~~~~~~~~~~~~~~ll 216 (1207)
T d1u6gc_ 155 MADMLSRQGG-LLVNFHPSILTCLLPQLTSPRLAVRKRTIIAL-----GHLVMSCGNIVFVDLIEHLL 216 (1207)
T ss_dssp HHHHHHHTCS-SCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHH-----HHHTTTC----CTTHHHHHH
T ss_pred HHHHHHHhhH-hhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-----HHHHHHCCHHHHHHHHHHHH
Confidence 5566554432 23344566788888899999999999987753 22333334444444444444
No 11
>d1szaa_ a.118.9.4 (A:) PCF11 protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=47.86 E-value=19 Score=29.71 Aligned_cols=83 Identities=11% Similarity=0.183 Sum_probs=61.9
Q ss_pred HHHHHhCcccHHHHHHHhhccCCCCCChHHHHHHHHHHHHHhhCCh---hHHHhhHHHHHHHHHHHhCCCcHHHHHHHHh
Q 010504 337 TQFVEKDCKLADTVIKGLLKYWPITNSSKEVMFLSELEEVLEATQP---PEFQKCMVPLFRQIASCLSSSHFQVAERALY 413 (508)
Q Consensus 337 ~qFveKDp~La~~vi~gLLk~WP~tns~KEv~FL~EleeiLe~~~~---~eF~~i~~pLF~~la~Ci~S~hfqVAErAL~ 413 (508)
+.+......-+..++..+.++=-.+.+.+-+.+|.-+.+|+-.+.. ..|+.+..++|.....+..+.+=+-..|-+.
T Consensus 31 t~~a~~~~~~a~~Iv~~i~~~i~~~~~~~KL~~LYLiddI~~n~~~~y~~~f~~~l~~~f~~~y~~~~~~~r~kl~rll~ 110 (144)
T d1szaa_ 31 TKLAEENISCAQYFVDAIESRIEKCMPKQKLYAFYALDSICKNVGSPYTIYFSRNLFNLYKRTYLLVDNTTRTKLINMFK 110 (144)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCTTHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcccchhhhhhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4455555555666666665555567778899999999999987643 4578888999998888888777777889999
Q ss_pred hhcchh
Q 010504 414 LWNNDH 419 (508)
Q Consensus 414 lWnNe~ 419 (508)
+|..-.
T Consensus 111 iW~~r~ 116 (144)
T d1szaa_ 111 LWLNPN 116 (144)
T ss_dssp HHSSGG
T ss_pred HHhccC
Confidence 998643
No 12
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.87 E-value=1.4e+02 Score=27.44 Aligned_cols=75 Identities=16% Similarity=0.096 Sum_probs=44.3
Q ss_pred HHHHHHHHhCCCcHHHHHHHHhhh-----cchhHHHHHhhccccccccccHHHHhhhcccchHHHHHHHHHHHHHHHhhC
Q 010504 392 LFRQIASCLSSSHFQVAERALYLW-----NNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQNLTVNVRKIFSEID 466 (508)
Q Consensus 392 LF~~la~Ci~S~hfqVAErAL~lW-----nNe~i~~li~~n~~~IlPii~paL~~~s~~HWn~~V~~la~~vlk~l~e~D 466 (508)
++..+..++.+.+..|.+.|+... .++.....+.++ -++| .|..... |=+..|+..++.++.-+..-+
T Consensus 289 ~~~~l~~ll~~~~~~v~~~al~~l~nl~~~~~~~~~~~~~~--~~l~----~l~~ll~-~~~~~i~~~~~~~l~nl~~~~ 361 (503)
T d1wa5b_ 289 IPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINA--GVLP----ALRLLLS-SPKENIKKEACWTISNITAGN 361 (503)
T ss_dssp CHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT--THHH----HHHHHTT-CSCHHHHHHHHHHHHHHTTSC
T ss_pred hhhhhhhcccCCchhhhhhHHHHHHHHHHHHHHHHHhhhcc--chHH----HHHHHhc-CCCHHHHHHHHHHHHHHhhcc
Confidence 566777888888888887777654 333443333322 2334 4443332 226778888888777776666
Q ss_pred HHHHHHH
Q 010504 467 PELFDEC 473 (508)
Q Consensus 467 ~~lf~~~ 473 (508)
++.-...
T Consensus 362 ~~~~~~i 368 (503)
T d1wa5b_ 362 TEQIQAV 368 (503)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6544433
No 13
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.65 E-value=2.1e+02 Score=28.52 Aligned_cols=205 Identities=13% Similarity=0.154 Sum_probs=100.3
Q ss_pred HHHHHHhhcCCCCChhHHHHHHHHHHHHhccc---cCChHHHHHHHHHHHHHhhhcccCCcChHHHHHHHHHHHhccCCC
Q 010504 227 SFVLKLLDLFDSEDPREREYLKTILHRIYGKF---MVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALP 303 (508)
Q Consensus 227 ~Fv~~Ll~lfdSeDpRERd~LKtiLHriYgKf---~~~R~fIRk~Innif~~fiyEte~~nGIaELLeIlgSIInGFa~P 303 (508)
.++..|+..|+..+.+.+..+-..+.++.... +..-.++...+..+...+---.........++|.+++++....-.
T Consensus 519 ~il~~l~~~l~~~~~~~~~~~~~al~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~le~l~~i~~~~~~~ 598 (888)
T d1qbkb_ 519 YILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSG 598 (888)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHGGGGCSHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHSTTT
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhHHH
Confidence 45667888888888888776665555554322 222234444443333333333445566778999999998776555
Q ss_pred cHHHHHHHHHHHhhcCCCCCCccccchhHHHHHHHHHHhCcccHHHHHHHhhccCCCCCChHH--HHHHHHHHHHHhhCC
Q 010504 304 LKEEHKLFLIRALIPLHKPKCLAMYHQPLSYCITQFVEKDCKLADTVIKGLLKYWPITNSSKE--VMFLSELEEVLEATQ 381 (508)
Q Consensus 304 LKeEHk~Fl~rvLiPLHk~~~~~~yh~qL~yci~qFveKDp~La~~vi~gLLk~WP~tns~KE--v~FL~EleeiLe~~~ 381 (508)
..+.....+.+++ +..+..+...+......+ -.....++ +..++-+..+.+.+.
T Consensus 599 ~~~~~~~~~~~~~---------~~l~~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~l~~l~~l~~~l~ 654 (888)
T d1qbkb_ 599 FLPYCEPVYQRCV---------NLVQKTLAQAMLNNAQPD---------------QYEAPDKDFMIVALDLLSGLAEGLG 654 (888)
T ss_dssp THHHHHHHHHHHH---------HHHHHHHHHHHHHHHCTT---------------TSCCCCTHHHHHHHHHHHHHHHHHT
T ss_pred HhhhHHHHHHHHH---------HHHHHHHHHHHHHhcccc---------------cccchhHHHHHHHHHHHHHHHHHhh
Confidence 4443322222211 111112222111111110 00111111 112333334443332
Q ss_pred hhHHHhhH--HHHHHHHHHHhCCCcHHHHHHHHhhhcchhHHHHHhhccccccccccHHHHhhhcccchHHHHHHHHHHH
Q 010504 382 PPEFQKCM--VPLFRQIASCLSSSHFQVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQNLTVNVR 459 (508)
Q Consensus 382 ~~eF~~i~--~pLF~~la~Ci~S~hfqVAErAL~lWnNe~i~~li~~n~~~IlPii~paL~~~s~~HWn~~V~~la~~vl 459 (508)
. .|...+ ..++..+..|+.+.+..|-+.|+.++. .+.......-...++.++|.|.++...+ +..|++.+..++
T Consensus 655 ~-~~~~~~~~~~l~~~l~~~l~~~~~~vr~~a~~llg--dl~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~v~~~a~~~i 730 (888)
T d1qbkb_ 655 G-NIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLG--DLTKACFQHVKPCIADFMPILGTNLNPE-FISVCNNATWAI 730 (888)
T ss_dssp T-TTHHHHHTSCHHHHHHHHHTCSSHHHHHHHHHHHH--HHHHHCGGGTGGGHHHHHHHHHHTCCGG-GHHHHHHHHHHH
T ss_pred h-hhhhhhhHhhHHHHHHHHhCCCChHHHHHHHHHHH--HHHHhhhHHHHHHHHHHHHHHHHHhCcC-CHHHHHHHHHHH
Confidence 2 122222 236777888999999999999988764 2333333333333444566666544322 345555544443
No 14
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.93 E-value=1.5e+02 Score=26.09 Aligned_cols=231 Identities=11% Similarity=0.056 Sum_probs=107.0
Q ss_pred HHHHhhcCCCCChhHHHHHHHHHHHHhccccCC--hHHHHHHHHHHHHHhhhcccCCcChHHHHHHHHHHHhccCCCcHH
Q 010504 229 VLKLLDLFDSEDPREREYLKTILHRIYGKFMVH--RPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKE 306 (508)
Q Consensus 229 v~~Ll~lfdSeDpRERd~LKtiLHriYgKf~~~--R~fIRk~Innif~~fiyEte~~nGIaELLeIlgSIInGFa~PLKe 306 (508)
|..|+..+.|+|+.++-.--..|.++..+--.. ..+++.-+-..+.+++-..+...=-.+.+.+|+.+..|- .
T Consensus 15 i~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~v~~~a~~~L~~la~~~-----~ 89 (434)
T d1q1sc_ 15 VEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGT-----S 89 (434)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHHSSSCCCHHHHHHTTCHHHHHHHTTCGGGHHHHHHHHHHHHHHHTSC-----H
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHhcCC-----h
Confidence 567888999999999888777777665322221 123333233455555522221111134556666665442 2
Q ss_pred HHHHHHH-----HHhhcCCCCCCccccchhHHHHHHHHHHhCccc---------HHHHHHHhhccCCCCCChHHH-HHHH
Q 010504 307 EHKLFLI-----RALIPLHKPKCLAMYHQPLSYCITQFVEKDCKL---------ADTVIKGLLKYWPITNSSKEV-MFLS 371 (508)
Q Consensus 307 EHk~Fl~-----rvLiPLHk~~~~~~yh~qL~yci~qFveKDp~L---------a~~vi~gLLk~WP~tns~KEv-~FL~ 371 (508)
+++..+. ..|+.+-..+.. ....+-..++......++.. ...++..+..+.........+ -...
T Consensus 90 ~~~~~i~~~~~i~~l~~~L~~~~~-~~~~~a~~~L~nl~~~~~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 168 (434)
T d1q1sc_ 90 EQTKAVVDGGAIPAFISLLASPHA-HISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTW 168 (434)
T ss_dssp HHHHHHHHTTHHHHHHHHTTCSCH-HHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHH
T ss_pred hhhhHhhhccchhhhhhccccCCH-HHHHHHHHHHHHHhccchHHHHHHHHhhhhhHHHHHHHhcccccchHHHHHHHHH
Confidence 4444332 234444444321 22223333333333333332 223333333322222111111 1112
Q ss_pred HHHHHHhhCChhHHHhhHHHHHHHHHHHhCCCcHHHHHHHHhhhcc-----hhHHHHHhhccccccccccHHHHhhhccc
Q 010504 372 ELEEVLEATQPPEFQKCMVPLFRQIASCLSSSHFQVAERALYLWNN-----DHIENLIRQNRKVILPIIFPALEKNGCNH 446 (508)
Q Consensus 372 EleeiLe~~~~~eF~~i~~pLF~~la~Ci~S~hfqVAErAL~lWnN-----e~i~~li~~n~~~IlPii~paL~~~s~~H 446 (508)
.+..+.....+.........++..+..++.+..-++.+.|+..+.+ +.....+. -+-++|.|.+.. .|
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~------~~~~~~~Lv~ll-~~ 241 (434)
T d1q1sc_ 169 TLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVV------KKGVVPQLVKLL-GA 241 (434)
T ss_dssp HHHHHTCCCTTCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHH------TTTCHHHHHHHH-TC
T ss_pred HHHHHhhcccccchhhhhhhHHHHHHHHHhccccchhhhHHhhhcccchhhhhhHHHHh------hcccchhccccc-cc
Confidence 2222222211111111233456666778888888888777654322 22222221 122445555433 23
Q ss_pred chHHHHHHHHHHHHHHHhhCHHHHHH
Q 010504 447 WNQVVQNLTVNVRKIFSEIDPELFDE 472 (508)
Q Consensus 447 Wn~~V~~la~~vlk~l~e~D~~lf~~ 472 (508)
=+..++..+..++.-+...++.....
T Consensus 242 ~~~~~~~~al~~l~~l~~~~~~~~~~ 267 (434)
T d1q1sc_ 242 TELPIVTPALRAIGNIVTGTDEQTQK 267 (434)
T ss_dssp SCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred chhhhhhchhhhhhhHHhhhhHHHHH
Confidence 37788888888887777666654443
No 15
>d1oksa_ a.8.5.1 (A:) RNA polymerase alpha subunit {Measles virus [TaxId: 11234]}
Probab=27.22 E-value=12 Score=26.49 Aligned_cols=42 Identities=33% Similarity=0.415 Sum_probs=33.9
Q ss_pred HHHHHHhccCCCcHHHHHHHHHHHhhcCCCCCCccccchhHHHH
Q 010504 292 VLGSIINGFALPLKEEHKLFLIRALIPLHKPKCLAMYHQPLSYC 335 (508)
Q Consensus 292 IlgSIInGFa~PLKeEHk~Fl~rvLiPLHk~~~~~~yh~qL~yc 335 (508)
++.|||..- -|.++||.++...|=-.-..+.+..|||-|.-.
T Consensus 5 VirSiIkSS--~l~~~hK~~ml~LLndikg~~dL~eF~QMl~~I 46 (54)
T d1oksa_ 5 VIRSIIKSS--RLEEDRKRYLMTLLDDIKGANDLAKFHQMLVKI 46 (54)
T ss_dssp HHHHHHHHS--CSCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh--hccHHHHHHHHHHHHHccccchHHHHHHHHHHH
Confidence 677888765 478999999999888888888999999866443
Done!