Citrus Sinensis ID: 010506
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 508 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SYG7 | 508 | Aldehyde dehydrogenase fa | yes | no | 1.0 | 1.0 | 0.828 | 0.0 | |
| Q9ZPB7 | 508 | Aldehyde dehydrogenase fa | N/A | no | 1.0 | 1.0 | 0.803 | 0.0 | |
| Q41247 | 494 | Aldehyde dehydrogenase fa | N/A | no | 0.964 | 0.991 | 0.823 | 0.0 | |
| P25795 | 508 | Aldehyde dehydrogenase fa | N/A | no | 0.982 | 0.982 | 0.785 | 0.0 | |
| Q2KJC9 | 539 | Alpha-aminoadipic semiald | yes | no | 0.984 | 0.927 | 0.595 | 1e-180 | |
| P49419 | 539 | Alpha-aminoadipic semiald | yes | no | 0.984 | 0.927 | 0.597 | 1e-179 | |
| P83401 | 509 | Putative aldehyde dehydro | yes | no | 0.988 | 0.986 | 0.591 | 1e-179 | |
| Q9DBF1 | 539 | Alpha-aminoadipic semiald | yes | no | 0.984 | 0.927 | 0.593 | 1e-179 | |
| Q64057 | 539 | Alpha-aminoadipic semiald | yes | no | 0.984 | 0.927 | 0.589 | 1e-177 | |
| P46562 | 531 | Putative aldehyde dehydro | yes | no | 0.984 | 0.941 | 0.583 | 1e-175 |
| >sp|Q9SYG7|AL7B4_ARATH Aldehyde dehydrogenase family 7 member B4 OS=Arabidopsis thaliana GN=ALDH7B4 PE=2 SV=3 | Back alignment and function desciption |
|---|
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/508 (82%), Positives = 463/508 (91%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M A EYEFLSEIGL+ G +V GKW+A+GP VS++NP NNQ IA VVEASLEDYE+
Sbjct: 1 MGSANNEYEFLSEIGLTSHNLGSYVAGKWQANGPLVSTLNPANNQPIAQVVEASLEDYEQ 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
G+KAC EA+KIWM++ APKRG++VRQIGDALR KL +LGRLLS+EMGKIL EGIGEVQEV
Sbjct: 61 GLKACEEAAKIWMQVTAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEV 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
IDMCDFAVGLSRQLNGSVIPSERPNHMMLE WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKGAPTTPLITIA+TKLV+EV E+N LPGAIFT+ CGGAEIG+AIAKD RI LV
Sbjct: 181 CGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTAMCGGAEIGEAIAKDTRIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGS++VG MVQQTV+ R GK LLELSGNNAII+MDDADI+LA RSVLFAAVGTAGQRC
Sbjct: 241 SFTGSSRVGSMVQQTVNARSGKTLLELSGNNAIIVMDDADIQLAARSVLFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRLL+HES+Y VL+QL+ YKQVKIG+PLEKGTLLGPLHTPES+KNFEKGIE IKS
Sbjct: 301 TTCRRLLLHESVYDKVLEQLLTSYKQVKIGNPLEKGTLLGPLHTPESKKNFEKGIEVIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKILTGG +E EGNFV+PTI+EIS A +VKEELFAPVLYV+KF++F EAV INNSV
Sbjct: 361 QGGKILTGGKAVEGEGNFVEPTIIEISADAAVVKEELFAPVLYVLKFKSFGEAVAINNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
PQGLSSSIFTR+PENIF+W+GP GSD GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD
Sbjct: 421 PQGLSSSIFTRNPENIFRWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
Query: 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508
SWKQYMRRSTCTINYGNELPLAQGINFG
Sbjct: 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508
|
Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q9ZPB7|AL7A1_MALDO Aldehyde dehydrogenase family 7 member A1 OS=Malus domestica PE=1 SV=3 | Back alignment and function description |
|---|
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/508 (80%), Positives = 459/508 (90%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M FAK+E+EFLS IGL+PE PG F+NGKWKA GP +S+++P NNQ+IA V E S+E+YEE
Sbjct: 1 MGFAKKEHEFLSAIGLAPENPGGFINGKWKASGPVISTVSPSNNQEIAKVTEVSMEEYEE 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
G+++C++A+K W LPAPKRGE+VRQIGDALREKL HLG+L+S+EMGKIL EGIGEVQEV
Sbjct: 61 GLRSCNDAAKTWKSLPAPKRGEIVRQIGDALREKLQHLGKLVSLEMGKILAEGIGEVQEV 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
I MCDFAVGLSRQLNGS+IPSERP+HMM E WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IYMCDFAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKGAPTTPL+TIA+TKL++EV E+N LP AIFT+FCGGAEIG+AIAKD RI LV
Sbjct: 181 CGNCVVWKGAPTTPLVTIAVTKLIAEVLEKNNLPAAIFTAFCGGAEIGEAIAKDTRIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGS+KVG VQQ V +RFGKCLLELSGNNA+I+MDDAD+ LAVRS+ FAAVGTAGQRC
Sbjct: 241 SFTGSSKVGAKVQQIVTERFGKCLLELSGNNALIVMDDADVGLAVRSIFFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRL +HESIYQ VLD+LV +Y QVKIGDPLE+GTL+GP+HT SR+NFEKGI IKS
Sbjct: 301 TTCRRLYLHESIYQNVLDKLVGLYNQVKIGDPLEEGTLVGPVHTKASRENFEKGISTIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKILTGGSVIES+GNFVQPTIVEI+ A +VKEELF PVLYVMKF+T EEA+ +NNSV
Sbjct: 361 QGGKILTGGSVIESDGNFVQPTIVEIASNASVVKEELFGPVLYVMKFKTLEEAIALNNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
PQGLSSSIFT P IFKW+GPHGSD GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD
Sbjct: 421 PQGLSSSIFTSKPNTIFKWIGPHGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
Query: 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508
SWKQYMRRSTCTINYG ELPLAQGINFG
Sbjct: 481 SWKQYMRRSTCTINYGTELPLAQGINFG 508
|
May play a role in fruit development. Malus domestica (taxid: 3750) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q41247|AL7A1_BRANA Aldehyde dehydrogenase family 7 member A1 OS=Brassica napus GN=BTG-26 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/493 (82%), Positives = 442/493 (89%), Gaps = 3/493 (0%)
Query: 1 MEFAKQEYEFLSEIGLSP-ETPGCFVNGKWKAHGPTVSSINPVNNQ--KIATVVEASLED 57
M A +EYEFLSEIGLS G +V GKW +GP VS++NP NNQ IA VVEASLED
Sbjct: 1 MGSASKEYEFLSEIGLSSSHNLGNYVGGKWLGNGPLVSTLNPANNQVLPIAQVVEASLED 60
Query: 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117
YE G+KAC EA+K WM++PAPKRG++VRQIGDALR KL +LGRLLS+EMGKIL EGIGEV
Sbjct: 61 YEIGLKACEEAAKTWMQVPAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEV 120
Query: 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177
QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLE WNPLG+VGVITAFNFPCAVLGWNACI
Sbjct: 121 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACI 180
Query: 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRI 237
ALVCGNCVVWKGAPTTPLITIA+TKLV+EV E+N LPGAIFT+ CGGAEIG+AIAKD RI
Sbjct: 181 ALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNHLPGAIFTAMCGGAEIGEAIAKDTRI 240
Query: 238 SLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAG 297
LVSFTGS+KVGL VQQTV R GK LLELSGNNAII+MDDADI+LA RSVLFAAVGTAG
Sbjct: 241 PLVSFTGSSKVGLTVQQTVSARSGKTLLELSGNNAIIVMDDADIQLAARSVLFAAVGTAG 300
Query: 298 QRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN 357
QRCTTCRRLL+HES+Y VL+QL+ YKQVKIGDPLEKGTLLGPLHTPES+KNFEKGIE
Sbjct: 301 QRCTTCRRLLLHESVYDKVLEQLLTSYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEV 360
Query: 358 IKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKIN 417
IKSQGGK+LTGG +E EGNFV+PTI+EIS A +VKEELFAPVLY +KF+TFEEAV IN
Sbjct: 361 IKSQGGKVLTGGKAVEGEGNFVEPTIIEISSDAAVVKEELFAPVLYALKFKTFEEAVAIN 420
Query: 418 NSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREA 477
NSVPQGLSSSIFTRSP+NIFKW+GP GSD GIVNVNIPTNGAEIGGAFGGEKATGGGREA
Sbjct: 421 NSVPQGLSSSIFTRSPDNIFKWIGPMGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREA 480
Query: 478 GSDSWKQYMRRST 490
GSDSWKQYMRRST
Sbjct: 481 GSDSWKQYMRRST 493
|
Brassica napus (taxid: 3708) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P25795|AL7A1_PEA Aldehyde dehydrogenase family 7 member A1 OS=Pisum sativum PE=1 SV=3 | Back alignment and function description |
|---|
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/499 (78%), Positives = 441/499 (88%)
Query: 10 FLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEAS 69
FL EIGL G F+NG+WKA+GPTV S+NP NQ IA+V EA+L+DYEEG++A SEA+
Sbjct: 10 FLKEIGLGATNIGSFINGQWKANGPTVHSVNPSTNQVIASVTEATLDDYEEGLRASSEAA 69
Query: 70 KIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVG 129
K W +PAPKRGE+VRQIGDALR KL LGRL+++EMGKIL EGIGEVQE+IDMCD++VG
Sbjct: 70 KTWRTVPAPKRGEIVRQIGDALRAKLDPLGRLVALEMGKILAEGIGEVQEIIDMCDYSVG 129
Query: 130 LSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKG 189
LSRQLNGS+IPSERP HMM E WNPLG+VGVITAFNFPCAVLGWNACIALV GN VVWKG
Sbjct: 130 LSRQLNGSIIPSERPEHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALVGGNTVVWKG 189
Query: 190 APTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG 249
APTTPLIT+A+TKL++EVFERN LPGAIFT+ CGGA+IG AIAKD RI LVSFTGS+KVG
Sbjct: 190 APTTPLITVAVTKLIAEVFERNNLPGAIFTALCGGADIGHAIAKDTRIPLVSFTGSSKVG 249
Query: 250 LMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
+VQQTV QRFGK LLELSGNNAII+MDDADI LAVRS+ FAAVGTAGQRCTTCRRL +H
Sbjct: 250 ALVQQTVSQRFGKTLLELSGNNAIIVMDDADITLAVRSIFFAAVGTAGQRCTTCRRLYLH 309
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369
ES+Y VL+QL +YKQVKIG+PLE+GTL+GPLHT + +NF+ GI IKSQGGKI+TGG
Sbjct: 310 ESVYANVLEQLTALYKQVKIGNPLEEGTLVGPLHTRSAVENFKNGISAIKSQGGKIVTGG 369
Query: 370 SVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429
SV+ESEGNFV PTIVEIS A +VKEELFAPVLYVMKF+ EEA+ +NNSVPQGLSSSIF
Sbjct: 370 SVLESEGNFVVPTIVEISADAAVVKEELFAPVLYVMKFKDLEEAIALNNSVPQGLSSSIF 429
Query: 430 TRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489
T+ P IFKW+GP GSD GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS
Sbjct: 430 TQKPSTIFKWIGPSGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489
Query: 490 TCTINYGNELPLAQGINFG 508
TCTINYG+ELPLAQGINFG
Sbjct: 490 TCTINYGSELPLAQGINFG 508
|
Pisum sativum (taxid: 3888) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q2KJC9|AL7A1_BOVIN Alpha-aminoadipic semialdehyde dehydrogenase OS=Bos taurus GN=ALDH7A1 PE=2 SV=4 | Back alignment and function description |
|---|
Score = 631 bits (1628), Expect = e-180, Method: Compositional matrix adjust.
Identities = 299/502 (59%), Positives = 378/502 (75%), Gaps = 2/502 (0%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GL E G + NG W G +++ P NN+ IA V +AS+ DYEE ++
Sbjct: 38 QYAWLKELGLREENDGVY-NGSWGGRGEVITTYCPANNEPIARVRQASMADYEETVEKAR 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA IW ++PAPKRGEVVRQIGDALREK+ LG L+S+EMGKIL EG+GEVQE +D+CD+
Sbjct: 97 EAWSIWADVPAPKRGEVVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDVCDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G ++PSERP H ++E WNP+G+VG+ITAFNFP AV GWN IA++CGN +
Sbjct: 157 AVGLSRMIGGPILPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNACL 216
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKGAPTT LI++A+TK++++V E NKLPGAI + CGGA+IG A+AKD R+ L+SFTGST
Sbjct: 217 WKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVDLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFG+ LLEL GNNAII +DAD+ L V S LFAAVGTAGQRCTT RRL
Sbjct: 277 QVGKQVALMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
+HESI+ V+++L Y Q+++G+P + L GPLHT ++ F +E K +GG ++
Sbjct: 337 FLHESIHDEVVNRLKKAYAQIRVGNPWDSNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PTIV + A IV E FAP+LYV KF+ +E NN V QGLS
Sbjct: 397 YGGKVMDRPGNYVEPTIVTGLDHDASIVHTETFAPILYVFKFKNEDEVFAWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQY 485
SSIFT+ IF+WLGP GSD GIVNVNIPT+GAEIGGAFGGEK TGGGRE+GSD+WKQY
Sbjct: 457 SSIFTKDMGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQY 516
Query: 486 MRRSTCTINYGNELPLAQGINF 507
MRRSTCTINY +LPLAQGI F
Sbjct: 517 MRRSTCTINYSKDLPLAQGIKF 538
|
Multifunctional enzyme mediating important protective effects. Metabolizes betaine aldehyde to betaine, an important cellular osmolyte and methyl donor. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Involved in lysine catabolism. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|P49419|AL7A1_HUMAN Alpha-aminoadipic semialdehyde dehydrogenase OS=Homo sapiens GN=ALDH7A1 PE=1 SV=5 | Back alignment and function description |
|---|
Score = 629 bits (1622), Expect = e-179, Method: Compositional matrix adjust.
Identities = 300/502 (59%), Positives = 378/502 (75%), Gaps = 2/502 (0%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GL E G + NG W G +++ P NN+ IA V +AS+ DYEE +K
Sbjct: 38 QYAWLKELGLREENEGVY-NGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAR 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA KIW ++PAPKRGE+VRQIGDALREK+ LG L+S+EMGKIL EG+GEVQE +D+CD+
Sbjct: 97 EAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G ++PSER H ++E WNP+G+VG+ITAFNFP AV GWN IA++CGN +
Sbjct: 157 AVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCL 216
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKGAPTT LI++A+TK++++V E NKLPGAI + CGGA+IG A+AKD R++L+SFTGST
Sbjct: 217 WKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFG+ LLEL GNNAII +DAD+ L V S LFAAVGTAGQRCTT RRL
Sbjct: 277 QVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
IHESI+ V+++L Y Q+++G+P + L GPLHT ++ F +E K +GG ++
Sbjct: 337 FIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PTIV + A I E FAP+LYV KF+ EE NN V QGLS
Sbjct: 397 YGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQY 485
SSIFT+ IF+WLGP GSD GIVNVNIPT+GAEIGGAFGGEK TGGGRE+GSD+WKQY
Sbjct: 457 SSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQY 516
Query: 486 MRRSTCTINYGNELPLAQGINF 507
MRRSTCTINY +LPLAQGI F
Sbjct: 517 MRRSTCTINYSKDLPLAQGIKF 538
|
Multifunctional enzyme mediating important protective effects. Metabolizes betaine aldehyde to betaine, an important cellular osmolyte and methyl donor. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Involved in lysine catabolism. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|P83401|AL7A1_DICDI Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Dictyostelium discoideum GN=DDB_G0276821 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 628 bits (1620), Expect = e-179, Method: Compositional matrix adjust.
Identities = 298/504 (59%), Positives = 382/504 (75%), Gaps = 2/504 (0%)
Query: 6 QEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKAC 65
EY FL+E+G+ E NGKW G + +NP NN+ IATV A+ E+YE ++A
Sbjct: 5 NEYPFLAELGIKAENNDGVFNGKWGGAGEIIKCLNPTNNKVIATVRGAAPEEYETCIQAM 64
Query: 66 SEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCD 125
A W PAP+RGE+VR IG A+REK+ L +L+S+EMGKI E GEVQE ID+CD
Sbjct: 65 LAAKVKWALTPAPRRGEIVRLIGQAMREKIEPLSKLISLEMGKIYIEAKGEVQEFIDVCD 124
Query: 126 FAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCV 185
+A GLSR +NG V+PSERPNH+++ETWNPLG+VG+ITAFNFPCAVLGWNA I+++CGN
Sbjct: 125 YATGLSRSINGQVMPSERPNHILMETWNPLGLVGIITAFNFPCAVLGWNAAISMICGNVQ 184
Query: 186 VWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244
+WKGA TT LIT+A++K++ +V N + A+ G G +G+ + +D R L+SFTG
Sbjct: 185 LWKGASTTSLITLAVSKIIEKVLVENDVDPAVCCVLIGPGRTVGEQMIQDKRFGLISFTG 244
Query: 245 STKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCR 304
ST+VG + TVH FGK +LEL GNNAI++ +DADI+L +R+VLFA+VGT GQRCTTCR
Sbjct: 245 STEVGRRISSTVHGYFGKTILELGGNNAIVVAEDADIELVLRAVLFASVGTTGQRCTTCR 304
Query: 305 RLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGK 364
RL +HES+Y T+L++L YK +KIG+PLE+G L+GPLHT + K F +G+E IK QGGK
Sbjct: 305 RLFVHESLYDTILERLTKAYKTIKIGNPLEEGVLVGPLHTQSAVKEFTEGLEEIKKQGGK 364
Query: 365 ILTGGSVIE-SEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQG 423
++ GG+ ++ S GNFV+PT+V I A IVK ELF P+LY+MKF+ ++A NN VPQG
Sbjct: 365 VVIGGNKLDISGGNFVEPTVVAIEHDAPIVKTELFVPILYIMKFKNLDDAFAWNNEVPQG 424
Query: 424 LSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWK 483
LSSS+FT + +NIFKWLGP GSD GIVNVN+ TNGAEIGGAFGGEK TGGGRE+GSDSWK
Sbjct: 425 LSSSLFTNNQKNIFKWLGPTGSDCGIVNVNVATNGAEIGGAFGGEKETGGGRESGSDSWK 484
Query: 484 QYMRRSTCTINYGNELPLAQGINF 507
QY RRST TINYGN +PL+QGINF
Sbjct: 485 QYCRRSTNTINYGNTMPLSQGINF 508
|
Dictyostelium discoideum (taxid: 44689) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q9DBF1|AL7A1_MOUSE Alpha-aminoadipic semialdehyde dehydrogenase OS=Mus musculus GN=Aldh7a1 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 627 bits (1616), Expect = e-179, Method: Compositional matrix adjust.
Identities = 298/502 (59%), Positives = 378/502 (75%), Gaps = 2/502 (0%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L ++GL + G + NG W G +++ P NN+ IA V +ASL+DYEE +
Sbjct: 38 QYAWLQDLGLREDNEGVY-NGSWGGRGEVITTYCPANNEPIARVRQASLKDYEETIGKAK 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
+A IW ++PAPKRGE+VR+IGDA REK+ LGRL+S+EMGKIL EGIGEVQE +D+CD+
Sbjct: 97 KAWNIWADIPAPKRGEIVRKIGDAFREKIQLLGRLVSLEMGKILVEGIGEVQEYVDVCDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
A GLSR + G +PSERP H ++E WNPLG+VG+ITAFNFP AV GWN IAL+ GN +
Sbjct: 157 AAGLSRMIGGPTLPSERPGHALIEMWNPLGLVGIITAFNFPVAVFGWNNAIALITGNVCL 216
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKGAPTT L+++A+TK++++V E N LPGAI + CGGA+IG +A+D R++L+SFTGST
Sbjct: 217 WKGAPTTSLVSVAVTKIIAQVLEDNLLPGAICSLVCGGADIGTTMARDERVNLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFGK LLEL GNNAII +DAD+ L V SVLFAAVGTAGQRCTT RRL
Sbjct: 277 QVGKEVALMVQERFGKSLLELGGNNAIIAFEDADLSLVVPSVLFAAVGTAGQRCTTVRRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
+HESI+ V+D+L Y Q+++G+P + L GPLHT ++ F + +E K QGG ++
Sbjct: 337 FLHESIHNEVVDRLRSAYSQIRVGNPWDPNILYGPLHTKQAVSMFVRAVEEAKKQGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PTIV ++ A IV +E FAP+LYV KFQ EE + NN V QGLS
Sbjct: 397 YGGKVMDHPGNYVEPTIVTGLAHDAPIVHQETFAPILYVFKFQDEEEVFEWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQY 485
SSIFT+ IF+WLGP GSD GIVNVNIPT+GAEIGGAFGGEK TGGGRE+GSD+WKQY
Sbjct: 457 SSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQY 516
Query: 486 MRRSTCTINYGNELPLAQGINF 507
MRRSTCTINY LPLAQGI F
Sbjct: 517 MRRSTCTINYSTSLPLAQGIKF 538
|
Multifunctional enzyme mediating important protective effects. Metabolizes betaine aldehyde to betaine, an important cellular osmolyte and methyl donor. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Involved in lysine catabolism. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|Q64057|AL7A1_RAT Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus GN=Aldh7a1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 623 bits (1606), Expect = e-177, Method: Compositional matrix adjust.
Identities = 296/502 (58%), Positives = 379/502 (75%), Gaps = 2/502 (0%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L ++GL + G F NG W G +++ P NN+ IA V +AS++DYEE +
Sbjct: 38 QYAWLQDLGLREDNEGVF-NGSWGGRGEVITTYCPANNEPIARVRQASMKDYEETIGKAK 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
+A IW ++PAPKRGE+VR+IGDALREK+ LGRL+S+EMGKIL EGIGEVQE +D+CD+
Sbjct: 97 KAWNIWADIPAPKRGEIVRKIGDALREKIQLLGRLVSLEMGKILVEGIGEVQEYVDVCDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
A GLSR + G +PSERP H ++E WNPLG+VG+ITAFNFP AV GWN IAL+ GN +
Sbjct: 157 AAGLSRMIGGPTLPSERPGHALMEQWNPLGLVGIITAFNFPVAVFGWNNAIALITGNVCL 216
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKGAPTT L++IA+TK++++V E N LPGAI + CGGA++G A+A+D R++L+SFTGST
Sbjct: 217 WKGAPTTSLVSIAVTKIIAKVLEDNLLPGAICSLTCGGADMGTAMARDERVNLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFGK LLEL GNNAII +DAD+ L + S LFAAVGTAGQRCTT RRL
Sbjct: 277 QVGKQVALMVQERFGKSLLELGGNNAIIAFEDADLSLVLPSALFAAVGTAGQRCTTVRRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
+HESI+ V+D+L + Y Q+++G+P + L GPLHT ++ F + +E K +GG ++
Sbjct: 337 FLHESIHDEVVDRLKNAYSQIRVGNPWDPNILYGPLHTKQAVSMFVQAVEEAKKEGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PTIV + A IV +E FAP+LYV KF+ EE + NN V QGLS
Sbjct: 397 YGGKVMDHPGNYVEPTIVTGLVHDAPIVHKETFAPILYVFKFKNEEEVFEWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQY 485
SSIFT+ IF+WLGP GSD GIVNVNIPT+GAEIGGAFGGEK TGGGRE+GSD+WKQY
Sbjct: 457 SSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQY 516
Query: 486 MRRSTCTINYGNELPLAQGINF 507
MRRSTCTINY LPLAQGI F
Sbjct: 517 MRRSTCTINYSTALPLAQGIKF 538
|
Multifunctional enzyme mediating important protective effects. Metabolizes betaine aldehyde to betaine, an important cellular osmolyte and methyl donor. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Involved in lysine catabolism. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|P46562|AL7A1_CAEEL Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Caenorhabditis elegans GN=alh-9 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 615 bits (1586), Expect = e-175, Method: Compositional matrix adjust.
Identities = 294/504 (58%), Positives = 371/504 (73%), Gaps = 4/504 (0%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y FL E+GL+ G F +GKW A G V S P NN IA V +++DYE +
Sbjct: 28 KYGFLKELGLTENNAGVF-HGKWAASGQVVQSFAPANNSPIANVQNGNVQDYEIAISEAK 86
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
+A W E+PAP+RGE+VRQIGD LR +L +LG+L+S+EMGKI EG+GEVQE +D+CD+
Sbjct: 87 KAYNDWCEVPAPRRGEIVRQIGDKLRTQLQNLGKLVSLEMGKISAEGVGEVQEYVDICDY 146
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
A GLSR L G + PSERP H +LE WNPLGVVGVI+AFNFPCAV GWN +ALV GN VV
Sbjct: 147 ATGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVISAFNFPCAVYGWNNALALVTGNSVV 206
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WK AP+TPL IA+TKLV EV N + A+ + CG ++GQA+ KD R++LVSFTGS+
Sbjct: 207 WKPAPSTPLTAIAVTKLVEEVLVANNVNPALCSLVCGEGDVGQALVKDKRVNLVSFTGSS 266
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
++G +V Q V RFGK LLEL GNNAII+ +DAD+ + V + +FAAVGTAGQRCTT RRL
Sbjct: 267 EIGKIVGQQVQARFGKLLLELGGNNAIIVNEDADLNMVVPATVFAAVGTAGQRCTTTRRL 326
Query: 307 LIHESIYQTVLDQLVDVYKQV--KIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGK 364
++H+ +Y VL++L Y Q +IG PL+ T++GPLH ++ ++ + + GGK
Sbjct: 327 IVHDKVYDQVLERLKKAYAQFESRIGCPLDSNTIIGPLHNQQAVGKYKASVAEAVASGGK 386
Query: 365 ILTGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQG 423
I GG V+E +GNFV PTIV + + +V E FAP+LYV+KF T EEA+ INN V QG
Sbjct: 387 IEYGGKVLERDGNFVLPTIVTGLKHDSPVVLRETFAPILYVLKFSTLEEAIAINNEVDQG 446
Query: 424 LSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWK 483
LSSS+FT + +N+FKW+GP GSD GIVNVNIPT+GAEIGGAFGGEK TGGGRE+GSDSW+
Sbjct: 447 LSSSLFTTNIQNVFKWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWR 506
Query: 484 QYMRRSTCTINYGNELPLAQGINF 507
QYMRRSTCTINY ELPLAQGI F
Sbjct: 507 QYMRRSTCTINYSKELPLAQGIKF 530
|
Caenorhabditis elegans (taxid: 6239) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 508 | ||||||
| 224119508 | 508 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.860 | 0.0 | |
| 449447906 | 507 | PREDICTED: aldehyde dehydrogenase family | 0.990 | 0.992 | 0.860 | 0.0 | |
| 59860157 | 508 | aldehyde dehydrogenase family 7 member A | 1.0 | 1.0 | 0.848 | 0.0 | |
| 224073640 | 516 | predicted protein [Populus trichocarpa] | 1.0 | 0.984 | 0.839 | 0.0 | |
| 225444704 | 508 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 1.0 | 0.826 | 0.0 | |
| 242049414 | 509 | hypothetical protein SORBIDRAFT_02g02579 | 0.996 | 0.994 | 0.826 | 0.0 | |
| 224031057 | 509 | unknown [Zea mays] gi|414589591|tpg|DAA4 | 0.996 | 0.994 | 0.824 | 0.0 | |
| 226531366 | 509 | aldehyde dehydrogenase family 7 member A | 0.996 | 0.994 | 0.824 | 0.0 | |
| 312283183 | 508 | unnamed protein product [Thellungiella h | 1.0 | 1.0 | 0.830 | 0.0 | |
| 357158604 | 509 | PREDICTED: LOW QUALITY PROTEIN: aldehyde | 0.996 | 0.994 | 0.826 | 0.0 |
| >gi|224119508|ref|XP_002331178.1| predicted protein [Populus trichocarpa] gi|222873299|gb|EEF10430.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/508 (86%), Positives = 474/508 (93%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M FA++EYEFLSEIGLS GC+V+G WKA+GP V+S+NP NNQ IA VVE S+EDYEE
Sbjct: 1 MSFARKEYEFLSEIGLSSRNLGCYVDGTWKANGPVVTSVNPANNQAIAEVVEGSVEDYEE 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
GM+ACSEA+KIWM++P+PKRGE+VRQIGDALR KL LGRL+S+EMGKILPEGIGEVQE+
Sbjct: 61 GMRACSEAAKIWMQVPSPKRGEIVRQIGDALRTKLQELGRLVSLEMGKILPEGIGEVQEI 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
IDMCDF VGLSRQLNGSVIPSERPNH MLE WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IDMCDFCVGLSRQLNGSVIPSERPNHAMLEMWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKGAPTTPLITIA+T+LV+ V E+N LP AIFTSFCGGA+IGQAIAKD RISLV
Sbjct: 181 CGNCVVWKGAPTTPLITIAMTRLVAGVLEKNNLPPAIFTSFCGGADIGQAIAKDTRISLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGS+KVGLM+QQTV+QRFGKCLLELSGNNAIIIMDDADI+LAV SVLFAAVGTAGQRC
Sbjct: 241 SFTGSSKVGLMLQQTVNQRFGKCLLELSGNNAIIIMDDADIQLAVHSVLFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRLL+HESIYQ VLDQL+DVYKQVKIG+PLEKG LLGPLHT ESRK+FE+GIE IKS
Sbjct: 301 TTCRRLLLHESIYQRVLDQLLDVYKQVKIGNPLEKGNLLGPLHTSESRKSFERGIEIIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKIL GGSVIESEGNFVQPTIVEISP AD+VKEELFAPVLYVMKFQT +EA++INNSV
Sbjct: 361 QGGKILIGGSVIESEGNFVQPTIVEISPNADVVKEELFAPVLYVMKFQTLQEAIEINNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
PQGLSSSIFTR PE IFKW+GP GSD GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD
Sbjct: 421 PQGLSSSIFTRKPEIIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
Query: 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508
SWKQYMRRSTCTINYGNELPLAQGINFG
Sbjct: 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449447906|ref|XP_004141707.1| PREDICTED: aldehyde dehydrogenase family 7 member B4-like [Cucumis sativus] gi|449480506|ref|XP_004155914.1| PREDICTED: aldehyde dehydrogenase family 7 member B4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/503 (86%), Positives = 471/503 (93%)
Query: 6 QEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKAC 65
+EY FLSEIGL GC+VNG WK +GP VSS NP NNQ IA VVEAS +DYEEGM+AC
Sbjct: 5 KEYGFLSEIGLGSRNLGCYVNGAWKGNGPVVSSSNPANNQVIAEVVEASTQDYEEGMQAC 64
Query: 66 SEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCD 125
SEA+KIWM++PAPKRG++VRQIGDALR KLH LGRL+S+EMGKILPEGIGEVQE+IDMCD
Sbjct: 65 SEAAKIWMQVPAPKRGDIVRQIGDALRAKLHQLGRLVSLEMGKILPEGIGEVQEIIDMCD 124
Query: 126 FAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCV 185
F+VGLSRQLNGS+IPSERPNHMM+E WNPLG+VGVITAFNFPCAVLGWNACIALVCGNCV
Sbjct: 125 FSVGLSRQLNGSIIPSERPNHMMMEMWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCV 184
Query: 186 VWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGS 245
VWKGAPTTPLITIA+TKLV+ V E+N LPGAIFTSFCGGAEIGQAIAKD RI LVSFTGS
Sbjct: 185 VWKGAPTTPLITIAMTKLVAGVLEKNNLPGAIFTSFCGGAEIGQAIAKDRRIPLVSFTGS 244
Query: 246 TKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRR 305
+KVGLMVQQTV++R+GKCLLELSGNNAI++MDDADI+LAVRSVLFAAVGTAGQRCTTCRR
Sbjct: 245 SKVGLMVQQTVNERYGKCLLELSGNNAIVVMDDADIQLAVRSVLFAAVGTAGQRCTTCRR 304
Query: 306 LLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI 365
LL+HES+YQ VLDQLVDVYKQVKIGDPLEKGTLLGPLHT +SRKNFEKGIE IKSQGGKI
Sbjct: 305 LLLHESVYQKVLDQLVDVYKQVKIGDPLEKGTLLGPLHTSDSRKNFEKGIEIIKSQGGKI 364
Query: 366 LTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
+ GGSVIESEGNFV+PTIVEISP A++VKEELFAPVLYVMKF+T +EA++INNSVPQGLS
Sbjct: 365 VIGGSVIESEGNFVEPTIVEISPNANVVKEELFAPVLYVMKFKTLKEAIEINNSVPQGLS 424
Query: 426 SSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQY 485
SSIFTR PE IFKW GPHGSD GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQY
Sbjct: 425 SSIFTRRPEIIFKWTGPHGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQY 484
Query: 486 MRRSTCTINYGNELPLAQGINFG 508
MRRSTCTINYGNELPLAQGINFG
Sbjct: 485 MRRSTCTINYGNELPLAQGINFG 507
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|59860157|gb|AAX09646.1| aldehyde dehydrogenase family 7 member A1 [Euphorbia characias] | Back alignment and taxonomy information |
|---|
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/508 (84%), Positives = 467/508 (91%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M FA++EYEFLSEIGLS GC+VNG WKA+GP V++ NP NNQ IA VVE S+EDYEE
Sbjct: 1 MGFARKEYEFLSEIGLSERNLGCYVNGTWKANGPVVTTSNPANNQAIAEVVEGSIEDYEE 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
GMKACSEA+KIWM++PAPKRG++VRQIGDALR KL HLGRL+S+EMGKIL EGIGEVQE+
Sbjct: 61 GMKACSEAAKIWMQVPAPKRGDIVRQIGDALRGKLEHLGRLVSLEMGKILAEGIGEVQEI 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
IDMCDF VGLSRQLNGS+IPSERPNH MLE WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IDMCDFCVGLSRQLNGSIIPSERPNHAMLEMWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNC VWKGAPTTPL+TIA TKLV+EV ERN LP AIFTSFCGGA+IGQAIAKD RI LV
Sbjct: 181 CGNCAVWKGAPTTPLMTIATTKLVAEVLERNNLPLAIFTSFCGGADIGQAIAKDTRIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGS+KVGLMVQQTV+QR+GK LLELSGNNAII+MDDADI LA RS+LFAAVGTAGQRC
Sbjct: 241 SFTGSSKVGLMVQQTVNQRYGKSLLELSGNNAIIVMDDADIPLAARSILFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRL++HE IY TVLDQL+ YKQVKIGDPLEKGTLLGP+HT ESRKNFEKGIE IKS
Sbjct: 301 TTCRRLILHEKIYDTVLDQLLKSYKQVKIGDPLEKGTLLGPVHTAESRKNFEKGIELIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKILTGGSVIESEGN+VQPTIVEIS A++VKEELFAPVLYVMKFQT EEA++INNSV
Sbjct: 361 QGGKILTGGSVIESEGNYVQPTIVEISSKAEVVKEELFAPVLYVMKFQTLEEAIEINNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
PQGLSSSIFTR P+ IFKWLGPHGSD GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD
Sbjct: 421 PQGLSSSIFTRRPDVIFKWLGPHGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
Query: 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508
SWKQYMR STCTINYG+ELPLAQGINFG
Sbjct: 481 SWKQYMRASTCTINYGSELPLAQGINFG 508
|
Source: Euphorbia characias Species: Euphorbia characias Genus: Euphorbia Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224073640|ref|XP_002304124.1| predicted protein [Populus trichocarpa] gi|222841556|gb|EEE79103.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/516 (83%), Positives = 473/516 (91%), Gaps = 8/516 (1%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQ-KIATVVEASLEDYE 59
M FA++EYEFLSEIGLS GC+V+G WKA+GP V+S+NP NNQ IA VVE S+EDYE
Sbjct: 1 MGFARKEYEFLSEIGLSSRNLGCYVDGTWKANGPVVTSVNPANNQVAIAEVVEGSIEDYE 60
Query: 60 EGMKACSEASKIWME-------LPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE 112
EGM+ACSEA+KIWM+ +P+PKRGE+VRQIGDALR KL LGRL+S+EMGKILPE
Sbjct: 61 EGMRACSEAAKIWMQASLFFLAVPSPKRGEIVRQIGDALRTKLQQLGRLVSLEMGKILPE 120
Query: 113 GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLG 172
GIGEVQE+IDMCDF+VGLSRQLNGSVIPSERPNH MLE WNPLG+VGVITAFNFPCAVLG
Sbjct: 121 GIGEVQEIIDMCDFSVGLSRQLNGSVIPSERPNHAMLEMWNPLGIVGVITAFNFPCAVLG 180
Query: 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIA 232
WNACIALVCGNCVVWKGAPTTPLITIA+T+LV+ V E+N LP AIFTSFCGGA+IGQA+A
Sbjct: 181 WNACIALVCGNCVVWKGAPTTPLITIAMTRLVAGVLEKNNLPPAIFTSFCGGADIGQAVA 240
Query: 233 KDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAA 292
KD RI LVSFTGS+KVGLMVQQ V+QRFGKCLLELSGNNAII+MDDA+I+LAVRSV+FAA
Sbjct: 241 KDARIPLVSFTGSSKVGLMVQQIVNQRFGKCLLELSGNNAIIVMDDANIQLAVRSVMFAA 300
Query: 293 VGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFE 352
VGTAGQRCTTCRRLL+HESIYQ VLDQL+DVYKQVKIGDPLEKGTLLGPLHT ESRK+FE
Sbjct: 301 VGTAGQRCTTCRRLLLHESIYQRVLDQLLDVYKQVKIGDPLEKGTLLGPLHTSESRKSFE 360
Query: 353 KGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEE 412
KGIE IKSQ KI+TGGSVIESEGNFVQPTIVEISP AD+VKEELFAPVLYVMKFQT +E
Sbjct: 361 KGIEIIKSQACKIITGGSVIESEGNFVQPTIVEISPNADVVKEELFAPVLYVMKFQTLQE 420
Query: 413 AVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATG 472
A++INNSVPQGLSSSIFTR P IFKW+GP GSD GIVNVNIPTNGAEIGGAFGGEKATG
Sbjct: 421 AIEINNSVPQGLSSSIFTRQPGVIFKWIGPQGSDCGIVNVNIPTNGAEIGGAFGGEKATG 480
Query: 473 GGREAGSDSWKQYMRRSTCTINYGNELPLAQGINFG 508
GGREAGSDSWKQYMRRSTCTINYGNELPLAQGINFG
Sbjct: 481 GGREAGSDSWKQYMRRSTCTINYGNELPLAQGINFG 516
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225444704|ref|XP_002278093.1| PREDICTED: aldehyde dehydrogenase family 7 member A1 [Vitis vinifera] gi|297738549|emb|CBI27794.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/508 (82%), Positives = 470/508 (92%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M F ++EY+FL+EIG+ P PGC++NG+WKA GP VSS+NP NNQ+IA V EAS+EDYEE
Sbjct: 1 MSFERKEYQFLAEIGVGPANPGCYINGEWKARGPLVSSVNPSNNQRIAVVTEASIEDYEE 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
G+ ACSEA+K WM++PAPKRGE+VRQIG+ALR KL LGRL+S+EMGKIL EGIGEVQE+
Sbjct: 61 GLMACSEAAKTWMKIPAPKRGEIVRQIGEALRAKLGSLGRLVSLEMGKILAEGIGEVQEI 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
+DMCD+AVGLSRQ+NGS+IPSERP+HMM E WNP+G+VGVITAFNFPCAVLGWNAC+ALV
Sbjct: 121 VDMCDYAVGLSRQINGSIIPSERPDHMMCEVWNPMGIVGVITAFNFPCAVLGWNACLALV 180
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKGAPTTPL+TIA+TKLV+EV E+N LPGAIFTSFCGGAEIG+AI+KD RI LV
Sbjct: 181 CGNCVVWKGAPTTPLVTIAVTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAISKDARIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGS+KVGLMVQQ V+QRFGKCLLELSGNNAIIIM+DADI LAVRSVLFAAVGTAGQRC
Sbjct: 241 SFTGSSKVGLMVQQAVNQRFGKCLLELSGNNAIIIMEDADIGLAVRSVLFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRLL+HESIY+TVL+QL+DVYKQVK+GDPLEK TL+GPLHT S++NFEKGIE IK
Sbjct: 301 TTCRRLLVHESIYETVLNQLIDVYKQVKMGDPLEKSTLVGPLHTRASKENFEKGIEIIKF 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGG IL GGS +ESEGNFVQPTIVEISP A +VKEELF PVLYVMKFQTFEEAV++NNSV
Sbjct: 361 QGGNILIGGSTVESEGNFVQPTIVEISPNASVVKEELFGPVLYVMKFQTFEEAVEMNNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
PQGLSSSIFTR PE IFKW+GPHGSD GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD
Sbjct: 421 PQGLSSSIFTRKPEVIFKWIGPHGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
Query: 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508
SWKQYMRRSTCTINYGNELPLAQGINFG
Sbjct: 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242049414|ref|XP_002462451.1| hypothetical protein SORBIDRAFT_02g025790 [Sorghum bicolor] gi|241925828|gb|EER98972.1| hypothetical protein SORBIDRAFT_02g025790 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/506 (82%), Positives = 464/506 (91%)
Query: 3 FAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGM 62
FAK+E++FL+E+GL+ PG FV G W GP V+S +P NNQ IA VVEAS++DYEEGM
Sbjct: 4 FAKEEHQFLAELGLAQRNPGAFVCGAWGGSGPAVTSTSPTNNQVIAEVVEASVQDYEEGM 63
Query: 63 KACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVID 122
+AC +A+K WM PAPKRGE+VRQIGDALR KLHHLGRL+S+EMGKILPEGIGEVQE+ID
Sbjct: 64 RACFDAAKTWMAFPAPKRGEIVRQIGDALRAKLHHLGRLVSLEMGKILPEGIGEVQEIID 123
Query: 123 MCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCG 182
MCD+AVGLSRQLNGS+IPSERPNHMM+E WNPLGVVGVITAFNFPCAVLGWNACIALVCG
Sbjct: 124 MCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCG 183
Query: 183 NCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSF 242
NCVVWKGAPTTPLITIA+TK+V+ V E+N LPGAIFTSFCGG EIGQAIA D RI LVSF
Sbjct: 184 NCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIAVDTRIPLVSF 243
Query: 243 TGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTT 302
TGST+ GLMVQQ V+ RFGKCLLELSGNNAII+MDDADI+LAVRSVLFAAVGTAGQRCTT
Sbjct: 244 TGSTRAGLMVQQQVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTT 303
Query: 303 CRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG 362
CRRL++HESIYQT LDQLV+VYKQV+IGDPLEKGTLLGPLHTP S++NF KG++ IKSQG
Sbjct: 304 CRRLILHESIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENFLKGVQTIKSQG 363
Query: 363 GKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422
GKIL GGS IESEGNFVQPTIVEI+P+A +VKEELF PVLYVMKFQ+ +EA++INNSVPQ
Sbjct: 364 GKILFGGSAIESEGNFVQPTIVEITPSAAVVKEELFGPVLYVMKFQSLKEAIEINNSVPQ 423
Query: 423 GLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW 482
GLSSSIFT+ PE IFKWLGPHGSD GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW
Sbjct: 424 GLSSSIFTKRPEIIFKWLGPHGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW 483
Query: 483 KQYMRRSTCTINYGNELPLAQGINFG 508
KQYMRR+TCTINYG+ELPLAQGINFG
Sbjct: 484 KQYMRRATCTINYGSELPLAQGINFG 509
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224031057|gb|ACN34604.1| unknown [Zea mays] gi|414589591|tpg|DAA40162.1| TPA: aldehyde dehydrogenase family 7 member A1 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/506 (82%), Positives = 463/506 (91%)
Query: 3 FAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGM 62
FAK+E++FL+E+GL+ PG F G W GPTV+S +P NNQ IA VVEAS+ DYEEGM
Sbjct: 4 FAKEEHQFLAELGLAQRNPGAFACGAWGGSGPTVTSTSPTNNQVIAEVVEASVHDYEEGM 63
Query: 63 KACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVID 122
+AC +A+K WM +PAPKRGE+VRQIGDALR KLHHLGRL+S+EMGKILPEGIGEVQE+ID
Sbjct: 64 RACFDAAKTWMAIPAPKRGEIVRQIGDALRAKLHHLGRLVSLEMGKILPEGIGEVQEIID 123
Query: 123 MCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCG 182
MCD+AVGLSRQLNGS+IPSERPNHMM+E WNPLGVVGVITAFNFPCAVLGWNACIALVCG
Sbjct: 124 MCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCG 183
Query: 183 NCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSF 242
NCVVWKGAPTTPLITIA+TK+V+ V E+N LPGAIFTSFCGG EIGQAIA D RI LVSF
Sbjct: 184 NCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRIPLVSF 243
Query: 243 TGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTT 302
TGST+ GLMVQQ V RFGKCLLELSGNNAII+MDDADI+LAVRSVLFAAVGTAGQRCTT
Sbjct: 244 TGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTT 303
Query: 303 CRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG 362
CRRL++HE+IYQT LDQLV+VYKQV+IGDPLEKGTLLGPLHTP S++NF KGI+ IKSQG
Sbjct: 304 CRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQG 363
Query: 363 GKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422
GKIL GGS IESEGNFVQPTIVEI+P+A +VKEELF PVLYVMKFQ+ +EA++INNSVPQ
Sbjct: 364 GKILFGGSAIESEGNFVQPTIVEITPSAPVVKEELFGPVLYVMKFQSLKEAIEINNSVPQ 423
Query: 423 GLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW 482
GLSSSIFT+ P+ IFKWLGPHGSD GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW
Sbjct: 424 GLSSSIFTKRPDIIFKWLGPHGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW 483
Query: 483 KQYMRRSTCTINYGNELPLAQGINFG 508
KQYMRR+TCTINYG+ELPLAQGINFG
Sbjct: 484 KQYMRRATCTINYGSELPLAQGINFG 509
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|226531366|ref|NP_001149126.1| aldehyde dehydrogenase family 7 member A1 [Zea mays] gi|195624928|gb|ACG34294.1| aldehyde dehydrogenase family 7 member A1 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/506 (82%), Positives = 462/506 (91%)
Query: 3 FAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGM 62
FAK+E++FL+E+GL+ PG F G W GPTV+S +P NNQ IA VVEAS+ DYEEGM
Sbjct: 4 FAKEEHQFLAELGLAQRNPGAFACGAWGGSGPTVTSTSPTNNQVIAEVVEASVHDYEEGM 63
Query: 63 KACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVID 122
+AC +A+K WM +PAPKRGE+VRQIGDALR KLHHLGRL+S+EMGKILPEGIGEVQE+ID
Sbjct: 64 RACFDAAKTWMAIPAPKRGEIVRQIGDALRAKLHHLGRLVSLEMGKILPEGIGEVQEIID 123
Query: 123 MCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCG 182
MCD+AVGLSRQLNGS+IPSERPNHMM+E WNPLGVVGVITAFNFPCAVLGWNACIALVCG
Sbjct: 124 MCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCG 183
Query: 183 NCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSF 242
NCVVWKGAPTTPLITIA+TK+V+ V E+N LPGAIFTSFCGG EIGQAIA D RI LVSF
Sbjct: 184 NCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRIPLVSF 243
Query: 243 TGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTT 302
TGST+ GLMVQQ V RFGKCLLELSGNNAII+MDDADI+LAVRSVLFAAVGTAGQRCTT
Sbjct: 244 TGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTT 303
Query: 303 CRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG 362
CRRL++HE+IYQT LDQLV+VYKQV+IGDPLEKGTLLGPLHTP S++NF KGI+ IKSQG
Sbjct: 304 CRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQG 363
Query: 363 GKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422
GKIL GGS IESEGNFVQPTIVEI+P+A +VKEELF PVLY MKFQT +EA++INNSVPQ
Sbjct: 364 GKILFGGSAIESEGNFVQPTIVEITPSAPVVKEELFGPVLYAMKFQTLKEAIEINNSVPQ 423
Query: 423 GLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW 482
GLSSSIFT+ P+ IFKWLGPHGSD GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW
Sbjct: 424 GLSSSIFTKRPDIIFKWLGPHGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW 483
Query: 483 KQYMRRSTCTINYGNELPLAQGINFG 508
KQYMRR+TCTINYG+ELPLAQGINFG
Sbjct: 484 KQYMRRATCTINYGSELPLAQGINFG 509
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|312283183|dbj|BAJ34457.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
|---|
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/508 (83%), Positives = 461/508 (90%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M A +EYEFLSEIGLS G +V GKW+ +GP VS++NP NNQ IA VVEASL+DYE+
Sbjct: 1 MGSANKEYEFLSEIGLSSHNLGSYVGGKWQGNGPVVSTLNPANNQPIAQVVEASLDDYEK 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
G+KAC EA+K WM++PAPKRG++VRQIGDALR KL +LGRLLS+EMGKIL EGIGEVQEV
Sbjct: 61 GLKACEEAAKTWMQVPAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEV 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
IDMCDFAVGLSRQLNGSVIPSERPNHMMLE WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKGAPTTPLITIA+TKLV+EV E+N LPGAIFT+ CGGAEIG+AIAKD RI LV
Sbjct: 181 CGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTAMCGGAEIGEAIAKDTRIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGS+KVGL VQQTV R GK LLELSGNNAII+M+DADI+LA RSVLFAAVGTAGQRC
Sbjct: 241 SFTGSSKVGLKVQQTVSARSGKTLLELSGNNAIIVMEDADIQLAARSVLFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRLL+HE +Y VL+QL+ YKQVKIGDPLEKGTLLGPLHTPES+KNFEKGIE IKS
Sbjct: 301 TTCRRLLLHERVYDKVLEQLLTSYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEVIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKILTGG IE EGNFV+PTI+EIS A +VKEELFAPVLY +KF++FEEAV INNSV
Sbjct: 361 QGGKILTGGKAIEGEGNFVEPTIIEISSDASVVKEELFAPVLYALKFKSFEEAVAINNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
PQGLSSSIFTR+PENIFKW+GP GSD GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD
Sbjct: 421 PQGLSSSIFTRNPENIFKWIGPMGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
Query: 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508
SWKQYMRRSTCTINYGNELPLAQGINFG
Sbjct: 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508
|
Source: Thellungiella halophila Species: Eutrema halophilum Genus: Eutrema Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357158604|ref|XP_003578181.1| PREDICTED: LOW QUALITY PROTEIN: aldehyde dehydrogenase family 7 member A1-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/506 (82%), Positives = 462/506 (91%)
Query: 3 FAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGM 62
FA +E++FL+E+GLSP PG F G W GP +++ NP NNQ IA VVEAS++DYE+GM
Sbjct: 4 FAHKEHQFLAELGLSPRNPGSFACGAWGGSGPVITTTNPTNNQVIAEVVEASVDDYEKGM 63
Query: 63 KACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVID 122
AC +A+K WM +PAPKRGE+VRQIGDALR KL HLGRLLS+EMGKILPEGIGEVQE+ID
Sbjct: 64 NACFDAAKTWMAIPAPKRGEIVRQIGDALRAKLDHLGRLLSLEMGKILPEGIGEVQEIID 123
Query: 123 MCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCG 182
MCD+AVGLSRQLNGS+IPSERPNHMM+E WNPLGVVGVITAFNFPCAVLGWNACIALVCG
Sbjct: 124 MCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCG 183
Query: 183 NCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSF 242
NCVVWKGAPTTPLITIA+TK+V+ VFE+N LP AIFT+FCGGAEIGQAIA D RI LVSF
Sbjct: 184 NCVVWKGAPTTPLITIAMTKIVASVFEKNNLPSAIFTAFCGGAEIGQAIALDRRIPLVSF 243
Query: 243 TGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTT 302
TGS+KVG MVQQ V+ RFGKCLLELSGNNAIIIMDDADI LAVRSVLFAAVGTAGQRCTT
Sbjct: 244 TGSSKVGQMVQQQVNARFGKCLLELSGNNAIIIMDDADIPLAVRSVLFAAVGTAGQRCTT 303
Query: 303 CRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG 362
CRRLL+HESIYQTVLDQLV+VYKQV+IGDPLEKGTLLGPLHT S+++F KGI+ IKSQG
Sbjct: 304 CRRLLLHESIYQTVLDQLVEVYKQVRIGDPLEKGTLLGPLHTTASKESFLKGIQIIKSQG 363
Query: 363 GKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422
GKIL GGS IESEGNFVQPTIVEISP+A +V+EELF PVLYVMKFQT +EA++INNSVPQ
Sbjct: 364 GKILLGGSAIESEGNFVQPTIVEISPSAPVVREELFGPVLYVMKFQTLKEAIEINNSVPQ 423
Query: 423 GLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW 482
GLSSSIFTR P+ IFKW+GPHGSD GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW
Sbjct: 424 GLSSSIFTRKPDAIFKWIGPHGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW 483
Query: 483 KQYMRRSTCTINYGNELPLAQGINFG 508
KQYMRR+TCTINYG+ELPLAQGINFG
Sbjct: 484 KQYMRRATCTINYGSELPLAQGINFG 509
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 508 | ||||||
| TAIR|locus:2014380 | 508 | ALDH7B4 "AT1G54100" [Arabidops | 1.0 | 1.0 | 0.755 | 5.2e-207 | |
| UNIPROTKB|Q9ZPB7 | 508 | Q9ZPB7 "Aldehyde dehydrogenase | 1.0 | 1.0 | 0.736 | 2.9e-206 | |
| UNIPROTKB|Q41247 | 494 | BTG-26 "Aldehyde dehydrogenase | 0.964 | 0.991 | 0.748 | 2.4e-195 | |
| UNIPROTKB|E1C4W4 | 536 | ALDH7A1 "Uncharacterized prote | 0.984 | 0.932 | 0.549 | 4.3e-148 | |
| DICTYBASE|DDB_G0276821 | 509 | DDB_G0276821 "aldehyde dehydro | 0.986 | 0.984 | 0.536 | 1.2e-147 | |
| ZFIN|ZDB-GENE-030131-6129 | 541 | aldh7a1 "aldehyde dehydrogenas | 0.984 | 0.924 | 0.537 | 1.5e-147 | |
| UNIPROTKB|E2RQ99 | 539 | ALDH7A1 "Uncharacterized prote | 0.984 | 0.927 | 0.541 | 1.9e-147 | |
| UNIPROTKB|E1BFG0 | 539 | ALDH7A1 "Alpha-aminoadipic sem | 0.984 | 0.927 | 0.537 | 9.3e-146 | |
| UNIPROTKB|Q2KJC9 | 539 | ALDH7A1 "Alpha-aminoadipic sem | 0.984 | 0.927 | 0.537 | 1.2e-145 | |
| UNIPROTKB|P49419 | 539 | ALDH7A1 "Alpha-aminoadipic sem | 0.984 | 0.927 | 0.539 | 1.9e-145 |
| TAIR|locus:2014380 ALDH7B4 "AT1G54100" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2002 (709.8 bits), Expect = 5.2e-207, P = 5.2e-207
Identities = 384/508 (75%), Positives = 424/508 (83%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M A EYEFLSEIGL+ G +V GKW+A+GP VS++NP NNQ IA VVEASLEDYE+
Sbjct: 1 MGSANNEYEFLSEIGLTSHNLGSYVAGKWQANGPLVSTLNPANNQPIAQVVEASLEDYEQ 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
G+KAC EA+KIWM++ APKRG++VRQIGDALR KL +LGRLLS+EMGKIL EGIGEVQEV
Sbjct: 61 GLKACEEAAKIWMQVTAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEV 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
IDMCDFAVGLSRQLNGSVIPSERPNHMMLE WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKG KLV+EV E+N LPGAIFT+ CGGAEIG+AIAKD RI LV
Sbjct: 181 CGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTAMCGGAEIGEAIAKDTRIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRC 300
SFTGS++VG MVQQTV+ R GK LLELSGNN +LA RSVLFAAVGTAGQRC
Sbjct: 241 SFTGSSRVGSMVQQTVNARSGKTLLELSGNNAIIVMDDADIQLAARSVLFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRLL+HES+Y VL+QL+ YKQVKIG+PLEKGTLLGPLHTPES+KNFEKGIE IKS
Sbjct: 301 TTCRRLLLHESVYDKVLEQLLTSYKQVKIGNPLEKGTLLGPLHTPESKKNFEKGIEVIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKILTGG +E EGNFV+PTI+EIS A +VKEELFAPVLYV+KF++F EAV INNSV
Sbjct: 361 QGGKILTGGKAVEGEGNFVEPTIIEISADAAVVKEELFAPVLYVLKFKSFGEAVAINNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSD 480
PQGLSSSIFTR+PENIF+W+GP GSD GIVNVNIPTNGAEI SD
Sbjct: 421 PQGLSSSIFTRNPENIFRWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
Query: 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508
SWKQYMRRSTCTINYGNELPLAQGINFG
Sbjct: 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508
|
|
| UNIPROTKB|Q9ZPB7 Q9ZPB7 "Aldehyde dehydrogenase family 7 member A1" [Malus x domestica (taxid:3750)] | Back alignment and assigned GO terms |
|---|
Score = 1995 (707.3 bits), Expect = 2.9e-206, P = 2.9e-206
Identities = 374/508 (73%), Positives = 420/508 (82%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M FAK+E+EFLS IGL+PE PG F+NGKWKA GP +S+++P NNQ+IA V E S+E+YEE
Sbjct: 1 MGFAKKEHEFLSAIGLAPENPGGFINGKWKASGPVISTVSPSNNQEIAKVTEVSMEEYEE 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
G+++C++A+K W LPAPKRGE+VRQIGDALREKL HLG+L+S+EMGKIL EGIGEVQEV
Sbjct: 61 GLRSCNDAAKTWKSLPAPKRGEIVRQIGDALREKLQHLGKLVSLEMGKILAEGIGEVQEV 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
I MCDFAVGLSRQLNGS+IPSERP+HMM E WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IYMCDFAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKG KL++EV E+N LP AIFT+FCGGAEIG+AIAKD RI LV
Sbjct: 181 CGNCVVWKGAPTTPLVTIAVTKLIAEVLEKNNLPAAIFTAFCGGAEIGEAIAKDTRIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRC 300
SFTGS+KVG VQQ V +RFGKCLLELSGNN LAVRS+ FAAVGTAGQRC
Sbjct: 241 SFTGSSKVGAKVQQIVTERFGKCLLELSGNNALIVMDDADVGLAVRSIFFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRL +HESIYQ VLD+LV +Y QVKIGDPLE+GTL+GP+HT SR+NFEKGI IKS
Sbjct: 301 TTCRRLYLHESIYQNVLDKLVGLYNQVKIGDPLEEGTLVGPVHTKASRENFEKGISTIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKILTGGSVIES+GNFVQPTIVEI+ A +VKEELF PVLYVMKF+T EEA+ +NNSV
Sbjct: 361 QGGKILTGGSVIESDGNFVQPTIVEIASNASVVKEELFGPVLYVMKFKTLEEAIALNNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSD 480
PQGLSSSIFT P IFKW+GPHGSD GIVNVNIPTNGAEI SD
Sbjct: 421 PQGLSSSIFTSKPNTIFKWIGPHGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
Query: 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508
SWKQYMRRSTCTINYG ELPLAQGINFG
Sbjct: 481 SWKQYMRRSTCTINYGTELPLAQGINFG 508
|
|
| UNIPROTKB|Q41247 BTG-26 "Aldehyde dehydrogenase family 7 member A1" [Brassica napus (taxid:3708)] | Back alignment and assigned GO terms |
|---|
Score = 1892 (671.1 bits), Expect = 2.4e-195, P = 2.4e-195
Identities = 369/493 (74%), Positives = 403/493 (81%)
Query: 1 MEFAKQEYEFLSEIGLSPE-TPGCFVNGKWKAHGPTVSSINPVNNQ--KIATVVEASLED 57
M A +EYEFLSEIGLS G +V GKW +GP VS++NP NNQ IA VVEASLED
Sbjct: 1 MGSASKEYEFLSEIGLSSSHNLGNYVGGKWLGNGPLVSTLNPANNQVLPIAQVVEASLED 60
Query: 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117
YE G+KAC EA+K WM++PAPKRG++VRQIGDALR KL +LGRLLS+EMGKIL EGIGEV
Sbjct: 61 YEIGLKACEEAAKTWMQVPAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEV 120
Query: 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177
QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLE WNPLG+VGVITAFNFPCAVLGWNACI
Sbjct: 121 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACI 180
Query: 178 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRI 237
ALVCGNCVVWKG KLV+EV E+N LPGAIFT+ CGGAEIG+AIAKD RI
Sbjct: 181 ALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNHLPGAIFTAMCGGAEIGEAIAKDTRI 240
Query: 238 SLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAG 297
LVSFTGS+KVGL VQQTV R GK LLELSGNN +LA RSVLFAAVGTAG
Sbjct: 241 PLVSFTGSSKVGLTVQQTVSARSGKTLLELSGNNAIIVMDDADIQLAARSVLFAAVGTAG 300
Query: 298 QRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN 357
QRCTTCRRLL+HES+Y VL+QL+ YKQVKIGDPLEKGTLLGPLHTPES+KNFEKGIE
Sbjct: 301 QRCTTCRRLLLHESVYDKVLEQLLTSYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEV 360
Query: 358 IKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKIN 417
IKSQGGK+LTGG +E EGNFV+PTI+EIS A +VKEELFAPVLY +KF+TFEEAV IN
Sbjct: 361 IKSQGGKVLTGGKAVEGEGNFVEPTIIEISSDAAVVKEELFAPVLYALKFKTFEEAVAIN 420
Query: 418 NSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXX 477
NSVPQGLSSSIFTRSP+NIFKW+GP GSD GIVNVNIPTNGAEI
Sbjct: 421 NSVPQGLSSSIFTRSPDNIFKWIGPMGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREA 480
Query: 478 XSDSWKQYMRRST 490
SDSWKQYMRRST
Sbjct: 481 GSDSWKQYMRRST 493
|
|
| UNIPROTKB|E1C4W4 ALDH7A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1446 (514.1 bits), Expect = 4.3e-148, P = 4.3e-148
Identities = 276/502 (54%), Positives = 348/502 (69%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GL + PG + NG+W G V++ P NN+ IA V +ASLEDYEE +K
Sbjct: 35 QYAWLRELGLQEDNPGVY-NGRWGGGGQVVTTYCPANNEPIARVRQASLEDYEETVKKAK 93
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA ++W ++PAPKRGEVVRQIGDALR+K+ LG L+S+EMGKI EG+GEVQE +D+CD+
Sbjct: 94 EAWQVWADIPAPKRGEVVRQIGDALRQKIKVLGSLVSLEMGKIYVEGVGEVQEYVDVCDY 153
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G V+PSER H ++E WNP+G+VG+ITAFNFP AV GWN+ IA++CGN +
Sbjct: 154 AVGLSRMIGGPVLPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNSAIAMICGNACL 213
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKG K+V++V E NK+PGA+ + CGGA+IG A+A+D R+ L+SFTGST
Sbjct: 214 WKGAPTTSLTSVAVTKIVAKVLEDNKIPGAVCSLVCGGADIGTAMARDERMDLLSFTGST 273
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFG+ LLEL GNN L + S LFAAVGTAGQRCTT RRL
Sbjct: 274 EVGKQVALMVQERFGRSLLELGGNNAIIVFEDADLNLVIPSTLFAAVGTAGQRCTTARRL 333
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
+HE+I+ V+++LV Y QV+IGDP + TL GPLHT + K F +E K QGG ++
Sbjct: 334 FLHENIHDEVVEKLVKAYAQVRIGDPWDSDTLYGPLHTKAAVKMFLDAVEQAKQQGGSVV 393
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG VI GN+V+PTIV ++ A IV E FAP+LYV+KF+ EE NN V QGLS
Sbjct: 394 YGGKVINRPGNYVEPTIVTGLAHNAPIVHTETFAPILYVLKFKEEEEVFAWNNEVKQGLS 453
Query: 426 SSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQY 485
SSIFTR IF+WLGP GSD GIVNVNIPT+GAEI SDSWK Y
Sbjct: 454 SSIFTRDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKLY 513
Query: 486 MRRSTCTINYGNELPLAQGINF 507
M+RSTCTINY +LPLAQGI F
Sbjct: 514 MKRSTCTINYSKDLPLAQGIKF 535
|
|
| DICTYBASE|DDB_G0276821 DDB_G0276821 "aldehyde dehydrogenase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1442 (512.7 bits), Expect = 1.2e-147, P = 1.2e-147
Identities = 270/503 (53%), Positives = 347/503 (68%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
EY FL+E+G+ E NGKW G + +NP NN+ IATV A+ E+YE ++A
Sbjct: 6 EYPFLAELGIKAENNDGVFNGKWGGAGEIIKCLNPTNNKVIATVRGAAPEEYETCIQAML 65
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
A W PAP+RGE+VR IG A+REK+ L +L+S+EMGKI E GEVQE ID+CD+
Sbjct: 66 AAKVKWALTPAPRRGEIVRLIGQAMREKIEPLSKLISLEMGKIYIEAKGEVQEFIDVCDY 125
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
A GLSR +NG V+PSERPNH+++ETWNPLG+VG+ITAFNFPCAVLGWNA I+++CGN +
Sbjct: 126 ATGLSRSINGQVMPSERPNHILMETWNPLGLVGIITAFNFPCAVLGWNAAISMICGNVQL 185
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGS 245
WKG K++ +V N + A+ G G +G+ + +D R L+SFTGS
Sbjct: 186 WKGASTTSLITLAVSKIIEKVLVENDVDPAVCCVLIGPGRTVGEQMIQDKRFGLISFTGS 245
Query: 246 TKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRR 305
T+VG + TVH FGK +LEL GNN +L +R+VLFA+VGT GQRCTTCRR
Sbjct: 246 TEVGRRISSTVHGYFGKTILELGGNNAIVVAEDADIELVLRAVLFASVGTTGQRCTTCRR 305
Query: 306 LLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI 365
L +HES+Y T+L++L YK +KIG+PLE+G L+GPLHT + K F +G+E IK QGGK+
Sbjct: 306 LFVHESLYDTILERLTKAYKTIKIGNPLEEGVLVGPLHTQSAVKEFTEGLEEIKKQGGKV 365
Query: 366 LTGGSVIE-SEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGL 424
+ GG+ ++ S GNFV+PT+V I A IVK ELF P+LY+MKF+ ++A NN VPQGL
Sbjct: 366 VIGGNKLDISGGNFVEPTVVAIEHDAPIVKTELFVPILYIMKFKNLDDAFAWNNEVPQGL 425
Query: 425 SSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQ 484
SSS+FT + +NIFKWLGP GSD GIVNVN+ TNGAEI SDSWKQ
Sbjct: 426 SSSLFTNNQKNIFKWLGPTGSDCGIVNVNVATNGAEIGGAFGGEKETGGGRESGSDSWKQ 485
Query: 485 YMRRSTCTINYGNELPLAQGINF 507
Y RRST TINYGN +PL+QGINF
Sbjct: 486 YCRRSTNTINYGNTMPLSQGINF 508
|
|
| ZFIN|ZDB-GENE-030131-6129 aldh7a1 "aldehyde dehydrogenase 7 family, member A1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1441 (512.3 bits), Expect = 1.5e-147, P = 1.5e-147
Identities = 270/502 (53%), Positives = 348/502 (69%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
EY +L E+GL + G + NG W G V+S P NN+ IA V +A++ +YEE ++
Sbjct: 40 EYNWLKELGLKEDNDGVY-NGSWGGQGEVVTSYCPANNEPIARVRQATIAEYEETIQKAL 98
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
+A K+W ++PAPKRGE+VRQIG+ALR K+ LG L+S+EMGKI EG+GEVQE +D+CD+
Sbjct: 99 DAWKVWADVPAPKRGEIVRQIGEALRRKIKALGSLVSLEMGKIYVEGVGEVQEYVDVCDY 158
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G ++PSERP H+++E WNP+G+VG+ITAFNFP AV GWN IAL+CGN +
Sbjct: 159 AVGLSRMIGGPILPSERPGHVLIEQWNPVGLVGIITAFNFPVAVYGWNNAIALICGNACL 218
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKG K+V+EV E+N LPGAI + CGGA+IG A+AKD R+ L+SFTGST
Sbjct: 219 WKGAPTTPLTSVAVTKIVAEVLEQNHLPGAICSMTCGGADIGMAMAKDERVGLLSFTGST 278
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRL 306
VG V V +RFG+ LLEL GNN L V S +FA+VGTAGQRCTT RRL
Sbjct: 279 HVGKQVAMMVQERFGRQLLELGGNNAIIVFEDADLSLVVPSAVFASVGTAGQRCTTTRRL 338
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
++HESI+ V++++ YKQ++IGDP + TL GPLHT ++ + + IE K QGG ++
Sbjct: 339 MLHESIHDEVVERIAKAYKQIRIGDPWDPNTLYGPLHTKQAVQQYLAAIEQAKQQGGTLV 398
Query: 367 TGGSVIESEGNFVQPTIVEISP-TADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG +++ GN+V+PTI+ P A IV E F P+LYV+KF+T EEA NN V QGLS
Sbjct: 399 CGGKIMDRPGNYVEPTIITGLPHNASIVHTETFVPILYVLKFKTEEEAFSWNNEVKQGLS 458
Query: 426 SSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQY 485
SSIFT+ +F+WLGP GSD GIVNVNIPT+GAEI SDSWKQY
Sbjct: 459 SSIFTKDMGRVFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQY 518
Query: 486 MRRSTCTINYGNELPLAQGINF 507
MRRSTCTINY +LPLAQGI F
Sbjct: 519 MRRSTCTINYSKDLPLAQGIKF 540
|
|
| UNIPROTKB|E2RQ99 ALDH7A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1440 (512.0 bits), Expect = 1.9e-147, P = 1.9e-147
Identities = 272/502 (54%), Positives = 348/502 (69%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GL E G + NG W G +++ P NN+ IA V +AS+ DYEE +K
Sbjct: 38 QYAWLKELGLREENEGVY-NGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAR 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA K+W E+PAPKRGEVVRQIGDALREK+ LG L+S+EMGKIL EG+GEVQE +D+CD+
Sbjct: 97 EAWKVWAEVPAPKRGEVVRQIGDALREKIQILGNLVSLEMGKILVEGVGEVQEYVDVCDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G ++PSERP H ++E WNP+G+VG+ITAFNFP AV GWN IA++CGN +
Sbjct: 157 AVGLSRMIGGPILPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCL 216
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKG K++++V E NKLPGAI + CGGA+IG A+AKD R++L+SFTGST
Sbjct: 217 WKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFG+ LLEL GNN L V SVLFAAVGTAGQRCTT RRL
Sbjct: 277 QVGRQVALMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSVLFAAVGTAGQRCTTARRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
+HESI+ V+++L Y+Q+++G+P + L GPLHT ++ F +E+ K +GG ++
Sbjct: 337 FLHESIHDEVVNRLKKAYEQIRVGNPWDSDVLYGPLHTKQAVSMFLAAVEDAKKEGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PT+V ++ A I E FAP+LYV KF+ EE NN V QGLS
Sbjct: 397 YGGKVMDRPGNYVEPTVVTGLAHNASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQY 485
SSIFT+ IF+WLGP GSD GIVNVNIPT+GAEI SD+WKQY
Sbjct: 457 SSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQY 516
Query: 486 MRRSTCTINYGNELPLAQGINF 507
MRRSTCTINY +LPLAQGI F
Sbjct: 517 MRRSTCTINYSKDLPLAQGIKF 538
|
|
| UNIPROTKB|E1BFG0 ALDH7A1 "Alpha-aminoadipic semialdehyde dehydrogenase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1424 (506.3 bits), Expect = 9.3e-146, P = 9.3e-146
Identities = 270/502 (53%), Positives = 343/502 (68%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GL E G + NG W G +++ P NN+ IA V +AS+ DYEE ++
Sbjct: 38 QYAWLKELGLREENDGVY-NGSWGGRGEVITTYCPANNEPIARVRQASMADYEETVEKAR 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA IW ++PAPKRGEVVRQIGDALREK+ LG L+S+EMGKIL EG+GEVQE +D+CD+
Sbjct: 97 EAWSIWADIPAPKRGEVVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDVCDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G ++PSERP H ++E WNP+G+VG+ITAFNFP AV GWN IA++CGN +
Sbjct: 157 AVGLSRMIGGPILPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNACL 216
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKG K++++V E NKLPGAI + CGGA+IG A+AKD R+ L+SFTGST
Sbjct: 217 WKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVDLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFG+ LLEL GNN L V S LFAAVGTAGQRCTT RRL
Sbjct: 277 QVGKQVALMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
+HESI+ V+++L Y Q+++G+P + L GPLHT ++ F +E K +GG ++
Sbjct: 337 FLHESIHDEVVNRLKKAYAQIRVGNPWDSNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PTIV + A IV E FAP+LYV KF+ +E NN V QGLS
Sbjct: 397 YGGKVMDRPGNYVEPTIVTGLDHDASIVHTETFAPILYVFKFKNEDEVFAWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQY 485
SSIFT+ IF+WLGP GSD GIVNVNIPT+GAEI SD+WKQY
Sbjct: 457 SSIFTKDMGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQY 516
Query: 486 MRRSTCTINYGNELPLAQGINF 507
MRRSTCTINY +LPLAQGI F
Sbjct: 517 MRRSTCTINYSKDLPLAQGIKF 538
|
|
| UNIPROTKB|Q2KJC9 ALDH7A1 "Alpha-aminoadipic semialdehyde dehydrogenase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1423 (506.0 bits), Expect = 1.2e-145, P = 1.2e-145
Identities = 270/502 (53%), Positives = 343/502 (68%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GL E G + NG W G +++ P NN+ IA V +AS+ DYEE ++
Sbjct: 38 QYAWLKELGLREENDGVY-NGSWGGRGEVITTYCPANNEPIARVRQASMADYEETVEKAR 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA IW ++PAPKRGEVVRQIGDALREK+ LG L+S+EMGKIL EG+GEVQE +D+CD+
Sbjct: 97 EAWSIWADVPAPKRGEVVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDVCDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G ++PSERP H ++E WNP+G+VG+ITAFNFP AV GWN IA++CGN +
Sbjct: 157 AVGLSRMIGGPILPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNACL 216
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKG K++++V E NKLPGAI + CGGA+IG A+AKD R+ L+SFTGST
Sbjct: 217 WKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVDLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFG+ LLEL GNN L V S LFAAVGTAGQRCTT RRL
Sbjct: 277 QVGKQVALMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
+HESI+ V+++L Y Q+++G+P + L GPLHT ++ F +E K +GG ++
Sbjct: 337 FLHESIHDEVVNRLKKAYAQIRVGNPWDSNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PTIV + A IV E FAP+LYV KF+ +E NN V QGLS
Sbjct: 397 YGGKVMDRPGNYVEPTIVTGLDHDASIVHTETFAPILYVFKFKNEDEVFAWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQY 485
SSIFT+ IF+WLGP GSD GIVNVNIPT+GAEI SD+WKQY
Sbjct: 457 SSIFTKDMGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQY 516
Query: 486 MRRSTCTINYGNELPLAQGINF 507
MRRSTCTINY +LPLAQGI F
Sbjct: 517 MRRSTCTINYSKDLPLAQGIKF 538
|
|
| UNIPROTKB|P49419 ALDH7A1 "Alpha-aminoadipic semialdehyde dehydrogenase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
Identities = 271/502 (53%), Positives = 343/502 (68%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GL E G + NG W G +++ P NN+ IA V +AS+ DYEE +K
Sbjct: 38 QYAWLKELGLREENEGVY-NGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAR 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA KIW ++PAPKRGE+VRQIGDALREK+ LG L+S+EMGKIL EG+GEVQE +D+CD+
Sbjct: 97 EAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G ++PSER H ++E WNP+G+VG+ITAFNFP AV GWN IA++CGN +
Sbjct: 157 AVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCL 216
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKG K++++V E NKLPGAI + CGGA+IG A+AKD R++L+SFTGST
Sbjct: 217 WKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFG+ LLEL GNN L V S LFAAVGTAGQRCTT RRL
Sbjct: 277 QVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
IHESI+ V+++L Y Q+++G+P + L GPLHT ++ F +E K +GG ++
Sbjct: 337 FIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PTIV + A I E FAP+LYV KF+ EE NN V QGLS
Sbjct: 397 YGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQY 485
SSIFT+ IF+WLGP GSD GIVNVNIPT+GAEI SD+WKQY
Sbjct: 457 SSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQY 516
Query: 486 MRRSTCTINYGNELPLAQGINF 507
MRRSTCTINY +LPLAQGI F
Sbjct: 517 MRRSTCTINYSKDLPLAQGIKF 538
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| B7GYG4 | BETB_ACIB3 | 1, ., 2, ., 1, ., 8 | 0.3010 | 0.9153 | 0.9489 | yes | no |
| A6UVT6 | LADH_META3 | 1, ., 2, ., 1, ., 2, 2 | 0.3114 | 0.9074 | 0.9913 | yes | no |
| B0VST2 | BETB_ACIBS | 1, ., 2, ., 1, ., 8 | 0.3030 | 0.9153 | 0.9489 | yes | no |
| B7I896 | BETB_ACIB5 | 1, ., 2, ., 1, ., 8 | 0.3010 | 0.9153 | 0.9489 | yes | no |
| B0V944 | BETB_ACIBY | 1, ., 2, ., 1, ., 8 | 0.3010 | 0.9153 | 0.9489 | yes | no |
| P42236 | ALDH1_BACSU | 1, ., 2, ., 1, ., 3 | 0.3454 | 0.8818 | 0.9180 | yes | no |
| P83401 | AL7A1_DICDI | 1, ., 2, ., 1, ., 3 | 0.5912 | 0.9881 | 0.9862 | yes | no |
| P46562 | AL7A1_CAEEL | 1, ., 2, ., 1, ., 3 | 0.5833 | 0.9842 | 0.9416 | yes | no |
| Q9SYG7 | AL7B4_ARATH | 1, ., 2, ., 1, ., 3 | 0.8287 | 1.0 | 1.0 | yes | no |
| Q9DBF1 | AL7A1_MOUSE | 1, ., 2, ., 1, ., 8 | 0.5936 | 0.9842 | 0.9276 | yes | no |
| Q64057 | AL7A1_RAT | 1, ., 2, ., 1, ., 8 | 0.5896 | 0.9842 | 0.9276 | yes | no |
| Q2KJC9 | AL7A1_BOVIN | 1, ., 2, ., 1, ., 8 | 0.5956 | 0.9842 | 0.9276 | yes | no |
| P25795 | AL7A1_PEA | 1, ., 2, ., 1, ., 3 | 0.7855 | 0.9822 | 0.9822 | N/A | no |
| P49419 | AL7A1_HUMAN | 1, ., 2, ., 1, ., 8 | 0.5976 | 0.9842 | 0.9276 | yes | no |
| Q9ZPB7 | AL7A1_MALDO | 1, ., 2, ., 1, ., 3 | 0.8031 | 1.0 | 1.0 | N/A | no |
| Q41247 | AL7A1_BRANA | 1, ., 2, ., 1, ., 3 | 0.8235 | 0.9645 | 0.9919 | N/A | no |
| A3M365 | BETB_ACIBT | 1, ., 2, ., 1, ., 8 | 0.3030 | 0.9153 | 0.9489 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_1580042 | aldehyde dehydrogenase (NAD+) (EC-1.2.1.3) (509 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| eugene3.00140876 | acetate-CoA ligase (EC-6.2.1.1) (684 aa) | • | • | 0.918 | |||||||
| estExt_fgenesh4_pg.C_LG_VII0287 | beta-ureidopropionase (EC-3.5.1.6) (418 aa) | • | • | 0.900 | |||||||
| gw1.XIV.108.1 | annotation not avaliable (356 aa) | • | 0.899 | ||||||||
| gw1.XI.942.1 | alcohol dehydrogenase (EC-1.1.1.1) (377 aa) | • | 0.899 | ||||||||
| gw1.XI.3391.1 | pyruvate decarboxylase (EC-4.1.1.1) (574 aa) | • | 0.899 | ||||||||
| gw1.X.6258.1 | hypothetical protein (497 aa) | • | 0.899 | ||||||||
| gw1.VII.1374.1 | annotation not avaliable (139 aa) | • | 0.899 | ||||||||
| NIT2 | nitrilase 2 (EC-3.5.5.1) (266 aa) | • | 0.899 | ||||||||
| gw1.V.4399.1 | hypothetical protein (495 aa) | • | • | 0.899 | |||||||
| gw1.IX.2840.1 | SubName- Full=Putative uncharacterized protein; (496 aa) | • | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 508 | |||
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 0.0 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 0.0 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-163 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-151 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-150 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-133 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-125 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-107 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-107 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-106 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-104 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-100 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 4e-96 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 2e-94 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 5e-94 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 2e-90 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 8e-90 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 5e-88 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 6e-87 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 6e-86 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 3e-85 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 5e-84 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 3e-83 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 3e-83 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 9e-83 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 2e-82 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 2e-82 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 6e-82 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 2e-81 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 2e-81 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 2e-81 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 1e-80 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 9e-80 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 5e-79 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 1e-78 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 3e-78 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 3e-78 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 4e-78 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 4e-78 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 7e-78 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 2e-77 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 2e-77 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-76 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-76 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 2e-76 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 2e-76 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 2e-75 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 6e-75 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-74 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 1e-74 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 2e-74 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 4e-73 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 7e-73 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 4e-72 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 7e-72 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 8e-72 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 1e-71 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 3e-71 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 6e-71 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 8e-70 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 3e-69 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 8e-69 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 2e-68 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 2e-67 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-64 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 3e-64 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 5e-64 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 9e-64 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-63 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 2e-63 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 1e-60 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 2e-60 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 4e-60 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 4e-58 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 5e-58 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 5e-58 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 2e-57 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 3e-56 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 1e-55 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 1e-55 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 6e-55 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 9e-55 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 6e-54 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 5e-51 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 7e-51 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 2e-47 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 7e-47 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 1e-46 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 2e-45 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 1e-43 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 4e-42 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 2e-40 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 3e-38 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 2e-37 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 7e-37 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 3e-36 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 1e-32 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 3e-30 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 3e-29 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 3e-27 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 5e-25 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 7e-25 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 5e-24 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 1e-23 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 9e-22 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 1e-20 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 3e-19 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 1e-16 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 1e-16 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 2e-15 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 5e-13 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 7e-13 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 3e-08 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 4e-08 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 5e-07 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 4e-05 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 0.002 | |
| cd07079 | 406 | cd07079, ALDH_F18-19_ProA-GPR, Gamma-glutamyl phos | 0.004 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 1034 bits (2674), Expect = 0.0
Identities = 439/508 (86%), Positives = 477/508 (93%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M FA++EYEFLSEIGLS GC+V G+W+A+GP VSS+NP NNQ IA VVEASLEDYEE
Sbjct: 1 MGFARKEYEFLSEIGLSSRNLGCYVGGEWRANGPLVSSVNPANNQPIAEVVEASLEDYEE 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
G++AC EA+KIWM++PAPKRGE+VRQIGDALR KL +LGRL+S+EMGKIL EGIGEVQE+
Sbjct: 61 GLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEI 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
IDMCDFAVGLSRQLNGS+IPSERPNHMM+E WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKGAPTTPLITIA+TKLV+EV E+N LPGAIFTSFCGGAEIG+AIAKD RI LV
Sbjct: 181 CGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGS+KVGLMVQQTV+ RFGKCLLELSGNNAII+MDDADI+LAVRSVLFAAVGTAGQRC
Sbjct: 241 SFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRLL+HESIY VL+QL+ VYKQVKIGDPLEKGTLLGPLHTPES+KNFEKGIE IKS
Sbjct: 301 TTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKILTGGS IESEGNFVQPTIVEISP AD+VKEELF PVLYVMKF+T EEA++INNSV
Sbjct: 361 QGGKILTGGSAIESEGNFVQPTIVEISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
PQGLSSSIFTR+PE IFKW+GP GSD GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD
Sbjct: 421 PQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
Query: 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508
SWKQYMRRSTCTINYGNELPLAQGINFG
Sbjct: 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508
|
Length = 508 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 895 bits (2315), Expect = 0.0
Identities = 322/474 (67%), Positives = 377/474 (79%)
Query: 23 CFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
+G+W G V+SI+P N + IA V +A+ EDYE +KA EA K W ++PAPKRGE
Sbjct: 1 GVYDGEWGGGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGE 60
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE 142
+VRQIGDALR+K LG+L+S+EMGKILPEG+GEVQE+ID+CDFAVGLSRQL G IPSE
Sbjct: 61 IVRQIGDALRKKKEALGKLVSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSE 120
Query: 143 RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202
RP H M+E WNPLGVVGVITAFNFP AV GWNA IALVCGN VVWK +PTTPL IA+TK
Sbjct: 121 RPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTK 180
Query: 203 LVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK 262
+V+ V E+N LPGAI + CGGA++G+A+ KDPR+ LVSFTGST VG V Q V RFG+
Sbjct: 181 IVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGR 240
Query: 263 CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322
LLEL GNNAII+M+DAD+ LAVR+VLFAAVGTAGQRCTT RRL++HESIY VL++L
Sbjct: 241 SLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKK 300
Query: 323 VYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPT 382
YKQV+IGDPL+ GTL+GPLHT + N+ IE KSQGG +L GG VI+ GN+V+PT
Sbjct: 301 AYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPT 360
Query: 383 IVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGP 442
IVE A IVKEE FAP+LYV+KF T EEA+ NN VPQGLSSSIFT N F+WLGP
Sbjct: 361 IVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGP 420
Query: 443 HGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496
GSD GIVNVNI T+GAEIGGAFGGEK TGGGRE+GSD+WKQYMRRSTCTINY
Sbjct: 421 KGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINYS 474
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 829 bits (2145), Expect = 0.0
Identities = 304/478 (63%), Positives = 368/478 (76%), Gaps = 4/478 (0%)
Query: 23 CFVNGKW-KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+ G+W + G T +S NP N + IA V AS ED E + A EA K W ++PAP+RG
Sbjct: 1 GVIGGEWVGSGGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRG 60
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
E+VRQIG+ALR+K LGRL+S+EMGKILPEG+GEVQE+ID+CD+AVGLSR L G IPS
Sbjct: 61 EIVRQIGEALRKKKEALGRLVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPS 120
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
ERP H ++E WNPLGVVGVITAFNFP AV GWNA IALVCGN VVWK + TTPL IA+T
Sbjct: 121 ERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVT 180
Query: 202 KLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261
K+++EV E+N LP + GG + G+ + DPR+ LVSFTGST+VG V +TV +RFG
Sbjct: 181 KILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFG 240
Query: 262 KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321
+ LLEL GNNAII+MDDAD+ LAVR+VLFAAVGTAGQRCTT RRL++HES+Y L++LV
Sbjct: 241 RVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLV 300
Query: 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFV 379
YKQV+IGDPL++GTL+GPL + + + IE KSQGG +LTGG I+ GN+V
Sbjct: 301 KAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYV 360
Query: 380 QPTIVEI-SPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
+PTIV + A IV+EE FAP+LYV+KF + EEA+ INN VPQGLSSSIFT F+
Sbjct: 361 EPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFR 420
Query: 439 WLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496
WLGP GSD GIVNVNIPT+GAEIGGAFGGEK TGGGRE+GSD+WKQYMRRSTCTINY
Sbjct: 421 WLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINYS 478
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 470 bits (1212), Expect = e-163
Identities = 169/463 (36%), Positives = 249/463 (53%), Gaps = 9/463 (1%)
Query: 30 KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGD 89
+ T+ INP + IATV A+ ED + + A A K W + P +R ++ + D
Sbjct: 3 DSSSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLKAAD 62
Query: 90 ALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMML 149
L E+ L L ++E GK L E GEV ID + GL+R+L G +PS P +
Sbjct: 63 LLEERRDELAELETLETGKPLAEARGEVPRAIDTLRYYAGLARKLEGETLPS-DPGVLAY 121
Query: 150 ETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFE 209
PLGVVG IT +NFP + W AL GN VV K + TPL + + +L E
Sbjct: 122 TRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEEA-- 179
Query: 210 RNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS 268
LP + G G+E+G A+ + P + VSFTGST+VG + + + + LEL
Sbjct: 180 --GLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRVTLELG 237
Query: 269 GNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328
G N +I+ DDAD+ AV +F A G AGQ CT RLL+HESIY +++LV+ K +K
Sbjct: 238 GKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKSLK 297
Query: 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-IS 387
+GDPL+ T +GPL + + R+ IE+ K +G K+L GG +G FV+PT++ ++
Sbjct: 298 VGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLADVT 357
Query: 388 PTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDT 447
P I +EE+F PVL V+ F+ +EA+++ N GL++ +FT E + +
Sbjct: 358 PDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVA--RRLEA 415
Query: 448 GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490
G+V +N T G FGG K +G GRE G + ++Y T
Sbjct: 416 GMVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETKT 458
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 438 bits (1130), Expect = e-151
Identities = 163/430 (37%), Positives = 238/430 (55%), Gaps = 9/430 (2%)
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
A K W LP +R ++R++ D L E+ L L ++E GK + E +GEV D +
Sbjct: 9 AAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRY 68
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
GL+R+L+G VIPS P + + PLGVVG IT +NFP + W AL GN VV
Sbjct: 69 YAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVV 128
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGS 245
K + TPL + + +L++E LP + G G E+G A+A PR+ +SFTGS
Sbjct: 129 LKPSELTPLTALLLAELLAEAG----LPPGVLNVVTGDGDEVGAALASHPRVDKISFTGS 184
Query: 246 TKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRR 305
T VG + + + + LEL G + +I+ DDAD+ AV+ +F A G AGQ CT R
Sbjct: 185 TAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASR 244
Query: 306 LLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI 365
LL+HESIY +++LV+ K +K+G+PL+ T +GPL + IE+ K++G K+
Sbjct: 245 LLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKL 304
Query: 366 LTGGSVIESE-GNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQG 423
L GG +E G FV PT++ + P I +EE+F PVL V+ F+ EEA+++ N G
Sbjct: 305 LCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYG 364
Query: 424 LSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWK 483
L++ +FTR E + + G V +N + GAE FGG K +G GRE G +
Sbjct: 365 LAAGVFTRDLERALRVAE--RLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLE 422
Query: 484 QYMRRSTCTI 493
+Y T TI
Sbjct: 423 EYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 436 bits (1123), Expect = e-150
Identities = 174/478 (36%), Positives = 255/478 (53%), Gaps = 12/478 (2%)
Query: 22 GCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++G+W T+ INP + IATV A+ ED + + A A + W L A +R
Sbjct: 2 KLLIDGEWVDGASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERA 61
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
++R+I D L + L L+++E GK + E GE+ D + +R+L G IP
Sbjct: 62 AILRRIADLLEARAEELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIP- 120
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
L PLGVVG IT +NFP A+ W AL GN VV K + TPL +A+
Sbjct: 121 TDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALA 180
Query: 202 KLVSEVFERNKLP-GAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
+L +E LP G + GGAE+G A+ P + +SFTGST VG +
Sbjct: 181 ELAAEAG----LPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANL 236
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
LEL G + I+++DAD+ AV + +F A AGQRCT RL++HES+Y +++L
Sbjct: 237 KPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERL 296
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQ 380
V +K+GDPL+ T LGPL + E E IE+ ++G ++L GG G FV+
Sbjct: 297 VARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRP--GGYFVE 354
Query: 381 PTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKW 439
PTI+E ++P I +EE+F PVL V++F+ EEA+++ N GL+++IFTR F+
Sbjct: 355 PTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRV 414
Query: 440 LGPHGSDTGIVNVNIPTNGAEIGGA-FGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496
+ G+V +N T GA+I FGG K +G GRE G +++ T TI G
Sbjct: 415 A--RRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLG 470
|
Length = 472 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 394 bits (1015), Expect = e-133
Identities = 179/482 (37%), Positives = 271/482 (56%), Gaps = 14/482 (2%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQK-IATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
++ G+W A G T S NP + ++ + T ++ D + ++A EA W ++PAP+R
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRR 61
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
E + + + L+++ L RL++ EMGK L EG G+VQE IDM +A G R+L G +P
Sbjct: 62 AEYLFRAAELLKKRKEELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVP 121
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
SE PN + P+GVV +IT +NFP A+ W ALVCGN VV+K A TP
Sbjct: 122 SELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACA--- 178
Query: 201 TKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
KLV E PG + G E+G+A+ + P + +VSFTGST+VG + +T +
Sbjct: 179 LKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPN 238
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
+ LE+ G N II+MDDAD+ LA+ L++A GT GQRCT RL++HES+Y L +
Sbjct: 239 KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRF 298
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEG 376
V+ K++++GD L++ T +GPL + E K +G +L GG + +G
Sbjct: 299 VERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKG 358
Query: 377 NFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435
FV+PT+ ++P I +EE+F PV+ +++ + EEA++I N GLSS+I+T
Sbjct: 359 YFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNK 418
Query: 436 IFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG-REAGSDSWKQYMRRSTCTIN 494
F+ + GI VN PT GAE+ FGG K +G G REAG+ + + ++
Sbjct: 419 AFRARR--DLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD 476
Query: 495 YG 496
Y
Sbjct: 477 YS 478
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 375 bits (964), Expect = e-125
Identities = 157/463 (33%), Positives = 246/463 (53%), Gaps = 12/463 (2%)
Query: 24 FVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
+++G+W A G + NP + + + AS ED + + A + A W R +
Sbjct: 4 YIDGEWVAGGDGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARAD 63
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE 142
++ + GD L + L RLL+ E GK LPE GEV + + G + +L+G +PS
Sbjct: 64 ILDKAGDELEARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPST 123
Query: 143 RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202
RP + T PLGVVG+IT +NFP A+ W AL GN VV+K A TP A+
Sbjct: 124 RPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALV- 182
Query: 203 LVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261
E+ E LP +F G G+E+GQA+ + P + VSFTGST VG + R
Sbjct: 183 ---EILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGA 239
Query: 262 KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321
+ LE+ G N ++++DDAD+ LAV + A + GQRCT RL++ E I+ ++ LV
Sbjct: 240 RVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALV 299
Query: 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES--EGNFV 379
+ K +K+GD L++G +GP+ + + + IE +S+G K++ GG ++ EG ++
Sbjct: 300 ERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYL 359
Query: 380 QPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
P + ++ I +EE+F PV V++ + ++EA+ I N GLS+ I T S ++
Sbjct: 360 APALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATH 419
Query: 439 WLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATG-GGREAGSD 480
+ + G+V VN+PT G + FGG K + G RE G
Sbjct: 420 FK--RRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEA 460
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 329 bits (847), Expect = e-107
Identities = 161/493 (32%), Positives = 254/493 (51%), Gaps = 37/493 (7%)
Query: 24 FVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
+ GK + S NP + ++ + TV +A+ E+ E ++A A W P +R
Sbjct: 36 VIGGKEVRTEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERAR 95
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE 142
++ + LR + L + +E+GK E +V E ID ++ +L G +
Sbjct: 96 LLLRAAALLRRRRFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEMV 155
Query: 143 RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202
+ PLGV VI+ +NFP A+L ALV GN VV K A TP+I K
Sbjct: 156 PGEDNRY-VYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIA---AK 211
Query: 203 LVSEVFERNKLP-GAIFTSFCGG--AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
LV E+ E LP G + +F G E+G + + P + ++FTGS +VGL +++R
Sbjct: 212 LV-EILEEAGLPPGVV--NFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGL----RIYER 264
Query: 260 FGK----------CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
K + E+ G NAII+ +DAD+ A ++ +A G GQ+C+ C R+++H
Sbjct: 265 AAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVH 324
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369
ES+Y L++LV+ K +K+GDP + +GP+ +R + IE K G++L GG
Sbjct: 325 ESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGK-SEGRLLLGG 383
Query: 370 SVIE--SEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSS 426
V+E +EG FVQPTI + P + +EE+F PVL V+K + F+EA++I N GL+
Sbjct: 384 EVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTG 443
Query: 427 SIFTRSPENI--FKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGEKATG-GGREAGSDSW 482
+F+RSPE++ + + G + N GA +G FGG K +G G + G D
Sbjct: 444 GVFSRSPEHLERAR----REFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYL 499
Query: 483 KQYMRRSTCTINY 495
Q+M+ T T N+
Sbjct: 500 LQFMQPKTVTENF 512
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 325 bits (836), Expect = e-107
Identities = 158/457 (34%), Positives = 241/457 (52%), Gaps = 23/457 (5%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
INP + I V +A D + + A + A K W + A +R ++R+ D +RE+ L
Sbjct: 2 INPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDL 61
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVV 158
RLL++E GK L E GEV ++ +R++ G IPS P +L P+GVV
Sbjct: 62 ARLLTLEQGKPLAEARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVV 121
Query: 159 GVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLP-GAI 217
IT +NFP A++ AL G VV K A TPL +A+ +L E LP G +
Sbjct: 122 AAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAEL----AEEAGLPAGVL 177
Query: 218 FTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG--LMVQ--QTVHQRFGKCLLELSGNNAI 273
AEIG+A+ PR+ +SFTGST VG LM Q TV + LEL GN
Sbjct: 178 NVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVK----RVSLELGGNAPF 233
Query: 274 IIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333
I+ DDAD+ AV + + AGQ C R+ +HESIY +++LV+ K++K+G+ L
Sbjct: 234 IVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGL 293
Query: 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADI 392
++GT +GPL + + E +E+ ++G K+LTGG + G F +PT++ +++ I
Sbjct: 294 DEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLI 353
Query: 393 VKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNV 452
+ EE F PV ++ F T +E + N P GL++ +FTR ++ + + G+V +
Sbjct: 354 MNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWR-VA-EALEAGMVGI 411
Query: 453 NIPTNGAEIGGA---FGGEKATGGGREAGSDSWKQYM 486
N I A FGG K +G GRE G + ++Y+
Sbjct: 412 NTGL----ISDAEAPFGGVKESGLGREGGKEGLEEYL 444
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 325 bits (835), Expect = e-106
Identities = 142/420 (33%), Positives = 227/420 (54%), Gaps = 9/420 (2%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++NG++ + G T+ +NP + +ATV A+ ED + + A A K W LPA +R
Sbjct: 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERA 60
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
+R++ D +RE L +L+ E GK L EV+ D D+ +R++ G +IPS
Sbjct: 61 AYLRKLADLIRENADELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPS 120
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
+RPN + P+GVV I +NFP ++ ALV GN +V K + TPL +
Sbjct: 121 DRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFA 180
Query: 202 KLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
+LV E LP + G G+ +G A+ P++ ++S TGST+ G + + +
Sbjct: 181 ELVDEA----GLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENI 236
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
K LEL G I+M DAD+ LAV++++ + + GQ CT R+ +HE IY +++L
Sbjct: 237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKL 296
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE-GNFV 379
V+ K VK+GDP + T +GPL + E+ +E G +LTGG E E G F
Sbjct: 297 VEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFY 356
Query: 380 QPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
+PT++ + +IV+EE+F PVL V+KF + +EA+++ N GL+S I+T + +
Sbjct: 357 EPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMR 416
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 318 bits (817), Expect = e-104
Identities = 144/465 (30%), Positives = 233/465 (50%), Gaps = 29/465 (6%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPKRGEVVRQIGDALREKL 95
SINP + A V EAS D + + A A W +L +RG+++R++ D +
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPL 155
L L + + GK++ E +V+ + + + GL+ ++ G+VIP ++ +++ PL
Sbjct: 61 EELAELETRDNGKLIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPL 120
Query: 156 GVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSE------VFE 209
GVV IT +N P +L AL GN VV K + TP T+ + KL E V
Sbjct: 121 GVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVV- 179
Query: 210 RNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSG 269
N + G G E G+A+ + P ++ ++FTG T+ G + + + LEL G
Sbjct: 180 -NVVTG-------FGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGG 231
Query: 270 NNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329
+ I+ DDAD+ AV V+ AGQ C RLL+ SIY +++LV + +++
Sbjct: 232 KSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRV 291
Query: 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIVE 385
GDPL+ T +GPL T + E+ + + +G ++LTGG G F +PTI+
Sbjct: 292 GDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILA 351
Query: 386 -ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK-WLGPH 443
++ I +EE+F PVL V+ F EEA+ + N GL++ I+TR ++ +
Sbjct: 352 DVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTR---DLARAHRVAR 408
Query: 444 GSDTGIVNVNIPTNGA-EIGGAFGGEKATGGGREAGSDSWKQYMR 487
+ G V VN T A FGG K +G GRE G ++ ++Y +
Sbjct: 409 AIEAGTVWVN--TYRALSPSSPFGGFKDSGIGRENGIEAIREYTQ 451
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 307 bits (788), Expect = e-100
Identities = 156/432 (36%), Positives = 232/432 (53%), Gaps = 12/432 (2%)
Query: 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGE 116
D + A + A K W P +R ++R+ + L E+ + L E G P+ E
Sbjct: 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFE 60
Query: 117 VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA- 175
V I + A GL R+ G ++PS+ P + PLGVVGVI+ FNFP +L +
Sbjct: 61 VGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFP-LILAMRSV 119
Query: 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSF-CGGAEIGQAIAKD 234
AL GN VV K TP +T + L++E+FE LP + GG+EIG A+ +
Sbjct: 120 APALALGNAVVLKPDSRTP-VTGGL--LIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEH 176
Query: 235 PRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVG 294
PR+ ++SFTGST VG + + + K LEL GNN +I++DDAD+ LAV + F A
Sbjct: 177 PRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL 236
Query: 295 TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG 354
GQ C R+L+HES+Y +++LV K + +GDP + T++GPL
Sbjct: 237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAI 296
Query: 355 IENIKSQGGKILTGGSVIESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEA 413
+E+ + G ++LTGG+ EG F QPT+ +++P I +EE+F PV V+ F EEA
Sbjct: 297 VEDAVAAGARLLTGGTY---EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEA 353
Query: 414 VKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGG 473
V++ N GLS+++FTR E +TG+V++N T E FGG KA+GG
Sbjct: 354 VELANDTEYGLSAAVFTRDLERAMA-FA-ERLETGMVHINDQTVNDEPHVPFGGVKASGG 411
Query: 474 GREAGSDSWKQY 485
GR G S +++
Sbjct: 412 GRFGGPASLEEF 423
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 298 bits (765), Expect = 4e-96
Identities = 153/444 (34%), Positives = 235/444 (52%), Gaps = 14/444 (3%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
NP N + I TV S E+ E ++ +A + LPA KR +++ ++ + + + L
Sbjct: 4 RNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEEL 63
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE----RPNHMMLETWNP 154
+LL+IE+GK + + EV+ I + A ++ L G IP + + P
Sbjct: 64 AKLLTIEVGKPIKQSRVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREP 123
Query: 155 LGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLP 214
+GVVG IT FNFP + A+ GN VV K + TPL I + K++ E LP
Sbjct: 124 IGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEA----GLP 179
Query: 215 GAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAI 273
+ G G+E+G I +P+++++SFTGST VGL++ K LEL G++ +
Sbjct: 180 PGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPM 239
Query: 274 IIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333
I++ DAD++ AV + AGQ C +R+L+ E +Y L LV+ K++K+GDPL
Sbjct: 240 IVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPL 299
Query: 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEI-SPTADI 392
++ T LGPL +PE+ + E + + +GGKIL GG EG+F PT++E +P +
Sbjct: 300 DESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIV 357
Query: 393 VKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNV 452
+KEE+F PVL + K + EEAV+I NS GL +S+FT K + G V +
Sbjct: 358 MKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKV--ARELEAGGVVI 415
Query: 453 NIPTNGAEIGGAFGGEKATGGGRE 476
N T FGG K +G GRE
Sbjct: 416 NDSTRFRWDNLPFGGFKKSGIGRE 439
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 293 bits (752), Expect = 2e-94
Identities = 147/445 (33%), Positives = 232/445 (52%), Gaps = 13/445 (2%)
Query: 40 NPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99
NP + A V S +D E + A +A W +R ++ + + + + L
Sbjct: 5 NPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLI 64
Query: 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVG 159
LL E G + E ++ A G R++ G +PS+ P + + PLGVV
Sbjct: 65 DLLIDEGGSTYGKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVA 124
Query: 160 VITAFNFPCAVLGWNA-CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIF 218
IT FN+P +L AL GN VV K + TP+I + I +E+ E LP +F
Sbjct: 125 GITPFNYP-LILATKKVAFALAAGNTVVLKPSEETPVIGLKI----AEIMEEAGLPKGVF 179
Query: 219 TSF-CGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD 277
GGAE+G + DPR+ +V+FTGST VG + + + K LEL G N +I++
Sbjct: 180 NVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLA 239
Query: 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337
DAD+ AVR+ F A GQ C + R+++ E +Y + + V ++K+GDP + T
Sbjct: 240 DADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDT 299
Query: 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEE 396
++GPL +P + ++ +E+ ++G K+LTGG + +GNF QPT++ +++P I +EE
Sbjct: 300 VIGPLISPRQVERIKRQVEDAVAKGAKLLTGG---KYDGNFYQPTVLTDVTPDMRIFREE 356
Query: 397 LFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPT 456
F PV V+ + EEA+++ N GLS++I T + FK ++G+V++N PT
Sbjct: 357 TFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKL--AERLESGMVHINDPT 414
Query: 457 NGAEIGGAFGGEKATGGGREAGSDS 481
E FGG KA+G GRE G S
Sbjct: 415 ILDEAHVPFGGVKASGFGREGGEWS 439
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 292 bits (750), Expect = 5e-94
Identities = 143/466 (30%), Positives = 215/466 (46%), Gaps = 38/466 (8%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
INP + A+ AS ++ + A A W P +R + I DA+ L
Sbjct: 2 INPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEEL 61
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVV 158
RLL++E GK L E EV + + L + + + PLGVV
Sbjct: 62 ARLLTLEQGKPLAEAQFEVGGAVAWLRYTASLDLP---DEVIEDDDTRRVELRRKPLGVV 118
Query: 159 GVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIF 218
I +NFP + W AL+ GN VV K +P TPL T+ + +L EV P +
Sbjct: 119 AAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEVL-----PPGVL 173
Query: 219 TSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278
GG E+G A+ P I +SFTGST G V + + + LEL GN+A I++ D
Sbjct: 174 NVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPD 233
Query: 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTL 338
DI + + A +GQ C +RL +HESIY + LV + K +GD L+ GT
Sbjct: 234 VDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTT 293
Query: 339 LGPLHTPESRKNFEKG---IENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVK 394
LGP+ + ++K +E+ K++G K+L GG ++ G F+ PTIV + + IV
Sbjct: 294 LGPVQN---KMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVD 350
Query: 395 EELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK----------WLGPHG 444
EE F PVL V+K+ +E + N GL +S+++ E W+ HG
Sbjct: 351 EEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHG 410
Query: 445 SDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490
+ ++ + P FGG K +G G E G + K+Y +
Sbjct: 411 A----LDPDAP---------FGGHKQSGIGVEFGIEGLKEYTQTQV 443
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 283 bits (726), Expect = 2e-90
Identities = 146/453 (32%), Positives = 226/453 (49%), Gaps = 15/453 (3%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97
++NP + IA V +AS ED + + A A + W + +RG ++ ++ + +
Sbjct: 1 TLNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADE 60
Query: 98 LGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERP--NHMMLETWNP 154
L RL S++ GK + +V D + G + ++ G VIP P N+ + E P
Sbjct: 61 LARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVRE---P 117
Query: 155 LGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLP 214
+GVVG I +NFP W AL GN VV K A TPL + I +L++E P
Sbjct: 118 VGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEA----GFP 173
Query: 215 GAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAI 273
+ G G G A+ + P + ++FTGST VG + Q + LEL G +A
Sbjct: 174 AGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSAN 233
Query: 274 IIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333
I+ DAD+ AVR+ GQ CT RLL+HESIY L++ + + ++ GDPL
Sbjct: 234 IVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPL 293
Query: 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-ISPTADI 392
+ T +GPL + ++ + +G ++LTGG + G FV+PTI + P I
Sbjct: 294 DPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRI 353
Query: 393 VKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNV 452
+EE+F PV+ VM+F+ EEA++I N GL++ ++TR + G V +
Sbjct: 354 AQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRV--AAALKAGTVWI 411
Query: 453 NIPTNGAEIGGAFGGEKATGGGREAGSDSWKQY 485
N N + G FGG K +G GRE G ++ +Y
Sbjct: 412 NT-YNRFDPGSPFGGYKQSGFGREMGREALDEY 443
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 281 bits (722), Expect = 8e-90
Identities = 137/459 (29%), Positives = 215/459 (46%), Gaps = 31/459 (6%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97
+ NP + +A V E + + + A EA W + +R ++ ++ D + +
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADE 60
Query: 98 LGRLLSIEMGKILPEGIGEVQEVIDMCD----FAVGLSRQLNGSVIPSERPNHMMLETWN 153
L L S++ GK P + +++ FA QL+G P + +
Sbjct: 61 LALLESLDTGK--PITLARTRDIPRAAANFRFFA-DYILQLDGESYPQD-GGALNYVLRQ 116
Query: 154 PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL 213
P+GV G+IT +N P +L W AL GN VV K + TPL L E+ L
Sbjct: 117 PVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPL---TAWLLA-ELANEAGL 172
Query: 214 PGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
P + G G E G A+ P + L+SFTG T G + + LEL G N
Sbjct: 173 PPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNP 232
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332
I+ DAD+ AV + + ++ G+ C R+L+ SIY L++ V+ K +K+GDP
Sbjct: 233 NIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDP 292
Query: 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES----EGNFVQPTIVE-IS 387
L+ T +GPL + E + +E +++G ILTGG E G FV+PT++ +
Sbjct: 293 LDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLD 352
Query: 388 PTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLG-----P 442
+ + +EE+F PV+ V+ F EEA+++ N P GL++ ++TR LG
Sbjct: 353 NDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRD-------LGRAHRVA 405
Query: 443 HGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDS 481
+ G V VN ++ FGG KA+G GRE G S
Sbjct: 406 RRLEAGTVWVNCW-LVRDLRTPFGGVKASGIGREGGDYS 443
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 277 bits (712), Expect = 5e-88
Identities = 153/494 (30%), Positives = 234/494 (47%), Gaps = 44/494 (8%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPA 77
G F+N ++ G T +INP + I V EA ED + +KA A + W ++
Sbjct: 5 GLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDP 64
Query: 78 PKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNG 136
+RG ++ ++ D + L L S++ GK L E G+V I + G + ++ G
Sbjct: 65 RERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQG 124
Query: 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
IP + N + P+GV G I +NFP +L W AL GN VV K A TPL
Sbjct: 125 KTIPIDG-NFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLS 183
Query: 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255
+ + +L+ E P + G G G AI+ + ++FTGST VG + +
Sbjct: 184 ALYLAELIKEA----GFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEA 239
Query: 256 VHQR-FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ K LEL G + I+ DDAD+ AV F GQ C R+ + ESIY
Sbjct: 240 AAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYD 299
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEK---GIENIKSQGGKILTGGSV 371
+++ ++ +GDP + T GP S+ F+K IE+ K +G +LTGG
Sbjct: 300 EFVEKFKARAEKRVVGDPFDPDTFQGPQ---VSKAQFDKILSYIESGKKEGATLLTGGER 356
Query: 372 IESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
S+G F+QPT+ ++ I KEE+F PV+ ++KF+T +E ++ N GL++ +FT
Sbjct: 357 HGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFT 416
Query: 431 RSPENIFKWLGPHGSDT---GIVNVN--------IPTNGAEIGGAFGGEKATGGGREAGS 479
+ +I K L S G V VN +P FGG K +G GRE G
Sbjct: 417 K---DINKAL--RVSRALKAGTVWVNTYNVFDAAVP---------FGGFKQSGFGRELGE 462
Query: 480 DSWKQYMRRSTCTI 493
+ ++Y + TI
Sbjct: 463 EGLEEYTQVKAVTI 476
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 275 bits (705), Expect = 6e-87
Identities = 161/477 (33%), Positives = 242/477 (50%), Gaps = 26/477 (5%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
+++G+W A G T INP N + IATV E + ED + + A A S W LPA +
Sbjct: 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQE 60
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R ++ +I D +RE L RL ++ GK L E ++ +V + + GL+ + G V
Sbjct: 61 RAALLFRIADKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVY 120
Query: 140 PSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
P H++ T P+GV G+IT +N+P W AL GN VV K + TPL TI
Sbjct: 121 DV--PPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTI 178
Query: 199 AITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
A+ +L+ E LP + G GA +G +A+ P + LVSFTG T G + +
Sbjct: 179 ALFELIEEA----GLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAA 234
Query: 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
K LEL G N I+ DAD + AV L AGQ C+ RLL+ ESI+ +
Sbjct: 235 GNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFV 294
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---- 373
L + K++K+G+ L+ T +GPL + E R+ I+ K +G +++ GG
Sbjct: 295 AALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDEL 354
Query: 374 SEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
++G FV+PTI ++ T IV+EE+F PVL V +F T EEA+++ N P GL+ +++T+
Sbjct: 355 AKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKD 414
Query: 433 PENIFKWLGPHGSDTGIVNVN---IPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
+ G V +N A +GG K +G GRE G ++Y
Sbjct: 415 IARANRVA--RRLRAGTVWINDYHPYFAEAP----WGGYKQSGIGRELGPTGLEEYQ 465
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 269 bits (689), Expect = 6e-86
Identities = 105/277 (37%), Positives = 147/277 (53%), Gaps = 5/277 (1%)
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
A K W LP +R ++R+I D L E+ L L ++E GK + E +GEV ID +
Sbjct: 5 AAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRY 64
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
A GL+ +L G +PS P PLGVVGVIT +NFP + W AL GN VV
Sbjct: 65 AAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVV 124
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGS 245
K + TPL +A+ +L+ E LP + G G E+G A+ PR+ +SFTGS
Sbjct: 125 LKPSELTPLTALALAELLQEAG----LPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGS 180
Query: 246 TKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRR 305
T VG + + + LEL G + +I+ +DAD+ AV +F A AGQ CT R
Sbjct: 181 TAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASR 240
Query: 306 LLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPL 342
LL+HESIY +++LV V V P+ + + GP+
Sbjct: 241 LLVHESIYDEFVEKLVTVLVDVDPDMPIAQEEIFGPV 277
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 269 bits (691), Expect = 3e-85
Identities = 141/451 (31%), Positives = 222/451 (49%), Gaps = 31/451 (6%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
I+P + + I V AS ED E+ + A E +K LPA +R E++ + L E+
Sbjct: 4 ISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEF 63
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP------SERPNHMMLETW 152
R +++E GK + + EV I+ + +++L G IP E +
Sbjct: 64 ARTIALEAGKPIKDARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGE--GRIGFTIR 121
Query: 153 NPLGVVGVITAFNFP----CAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208
P+GVV IT FNFP +G A+ GN VV K A TPL + + E+
Sbjct: 122 EPIGVVAAITPFNFPLNLVAHKVG----PAIAAGNAVVLKPASQTPLSALKLA----ELL 173
Query: 209 ERNKLPGAIFTSFCGGAE-IGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLEL 267
LP G E +G A+ DPR+ ++SFTGS VG + + + K LEL
Sbjct: 174 LEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAGLK--KVTLEL 231
Query: 268 SGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQV 327
N A+I+ DAD++ AV + A AGQ C + +R+ +HE IY L++ V K++
Sbjct: 232 GSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKL 291
Query: 328 KIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-I 386
+GDPL++ T +GP+ + + E+ +E G ++LTGG +G ++PT++ +
Sbjct: 292 VVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDV 348
Query: 387 SPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSD 446
P +V EE+FAPV+ + F T +EA+ + N P GL + +FT + K +
Sbjct: 349 PPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAA--RELE 406
Query: 447 TGIVNVN-IPTNGAEIGGAFGGEKATGGGRE 476
G V +N T + +GG K +G GRE
Sbjct: 407 VGGVMINDSSTFRVD-HMPYGGVKESGTGRE 436
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 267 bits (686), Expect = 5e-84
Identities = 138/443 (31%), Positives = 221/443 (49%), Gaps = 21/443 (4%)
Query: 24 FVNGKWK-AHGPTVSSI-NPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
F+NG+W + + NP + IA V A+ E+ + + A A W P KR
Sbjct: 4 FINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQ 63
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
+V+ + L E L L RL+++E GK L + G+V +++ +FA + L G + +
Sbjct: 64 QVMFKFRQLLEENLDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLEN 123
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
PLGVV IT FNFP + W +A+ CGN V K + P + +
Sbjct: 124 VARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLA 183
Query: 202 KLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR-- 259
+L+ E LP + GG E A+ P I VSF GST VG + +++R
Sbjct: 184 ELLQEA----GLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVG----EYIYERAA 235
Query: 260 -FGKCLLELSG-NNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
GK + L G N ++M DAD++ +++ AA G AGQRC + +
Sbjct: 236 ANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWI 295
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---- 373
+LV+ K++K+G + G +GP+ +P +++ E IE+ +G K++ G ++
Sbjct: 296 PKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGY 355
Query: 374 SEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
GNFV PTI++ ++P I KEE+F PVL +++ T +EA+ I N+ P G ++IFTRS
Sbjct: 356 ENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRS 415
Query: 433 PENIFKWLGPHGSDTGIVNVNIP 455
K+ D G+V +N+P
Sbjct: 416 GAAARKFQ--REVDAGMVGINVP 436
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 264 bits (677), Expect = 3e-83
Identities = 131/434 (30%), Positives = 207/434 (47%), Gaps = 35/434 (8%)
Query: 59 EEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQ 118
E + A W + +R ++R++ D LRE+ L RL+++EMGK + E EV+
Sbjct: 2 EAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVE 61
Query: 119 EVIDMCDF-AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN--- 174
+ +C + A L I ++ + + PLGVV I +NFP W
Sbjct: 62 KCAWICRYYAENAEAFLADEPIETDAGKAYV--RYEPLGVVLGIMPWNFPF----WQVFR 115
Query: 175 -ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTS-FCGGAEIGQAIA 232
A L+ GN V+ K A P +AI E+F P +F + ++ IA
Sbjct: 116 FAAPNLMAGNTVLLKHASNVPGCALAIE----ELFREAGFPEGVFQNLLIDSDQVEAIIA 171
Query: 233 KDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAA 292
DPR+ V+ TGS + G V + K +LEL G++ I++DDAD+ AV++ +
Sbjct: 172 -DPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGR 230
Query: 293 VGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFE 352
+ AGQ C +R ++HE +Y L++ V+ +K+GDP+++ T LGPL + R
Sbjct: 231 LQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELH 290
Query: 353 KGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFE 411
+ +E + G +L GG + G F PT++ ++P EELF PV V+K + E
Sbjct: 291 EQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEE 350
Query: 412 EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGS------DTGIVNVNIPT-NGAEIGGA 464
EA+ + N P GL S+FT E + G+V +N + +
Sbjct: 351 EAIALANDSPFGLGGSVFTTDLE--------RAERVARRLEAGMVFINGMVKSDPRL--P 400
Query: 465 FGGEKATGGGREAG 478
FGG K +G GRE G
Sbjct: 401 FGGVKRSGYGRELG 414
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 265 bits (679), Expect = 3e-83
Identities = 140/472 (29%), Positives = 215/472 (45%), Gaps = 34/472 (7%)
Query: 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
F+ G+W A T+ ++P + + V EA+ D + + A A + W L +
Sbjct: 2 FIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAE 61
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGSV 138
R V+R++ DAL + L RL + E G I + + + L+R
Sbjct: 62 RAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFP--- 118
Query: 139 IPSERPNHMM---LETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195
RP L P+GVV I +N P + AL G VV K +P TPL
Sbjct: 119 FEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPL 178
Query: 196 ITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255
+ + E LP + E+G+ + + P + VSFTGST G +
Sbjct: 179 DAYLLAEAAEEA----GLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAV 234
Query: 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
+R + LEL G +A I++DDAD+ AV ++ A++ GQ C R+L+ S Y
Sbjct: 235 CGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDE 294
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-- 373
V++ L +K+GDPL+ T +GPL + R+ E I +++G +++TGG
Sbjct: 295 VVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGL 354
Query: 374 SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
G FV+PT+ ++ I +EE+F PVL V+ + ++AV+I N GLS S++T
Sbjct: 355 DRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTAD 414
Query: 433 PENIFKWLGPHGSD------TGIVNVNIPTNGAEIGGAFGGEKATGGGREAG 478
E G TG V VN + G FGG K +G GRE G
Sbjct: 415 VE--------RGLAVARRIRTGTVGVNGFR--LDFGAPFGGFKQSGIGREGG 456
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 263 bits (675), Expect = 9e-83
Identities = 134/470 (28%), Positives = 211/470 (44%), Gaps = 26/470 (5%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97
INP Q +A V AS D + + A A W +R ++R++ LRE
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEE 60
Query: 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGV 157
L + +++ G + +G+V + D+ GL +L G IP ++ P GV
Sbjct: 61 LALIDALDCGNPVSAMLGDVMVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGV 119
Query: 158 VGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFER---NKLP 214
V I AFN P L GN VV K PL + + +L EV N LP
Sbjct: 120 VARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREVLPPGVFNILP 179
Query: 215 GAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274
G GA G A+ + P + ++ GS G + + + LEL G NA+I
Sbjct: 180 G-------DGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALI 232
Query: 275 IMDDADIKLAVRSVLFAAVG----TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330
+ DAD + A + A G GQ C + RL +HESIY VL ++V+ +K+G
Sbjct: 233 VFPDADPEAAADA---AVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVG 289
Query: 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG----SVIESEGNFVQPTIV-E 385
DP + T +GPL + + I++ K +G +++TGG G +V+PT+ +
Sbjct: 290 DPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFAD 349
Query: 386 ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGS 445
++P I +EE+F PVL V++++ E V N V GL+++I+T
Sbjct: 350 VTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAH--RTARRV 407
Query: 446 DTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495
+ G V +N ++ +G FGG K +G GRE + Y + +
Sbjct: 408 EAGYVWIN-GSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVRL 456
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 262 bits (672), Expect = 2e-82
Identities = 147/462 (31%), Positives = 223/462 (48%), Gaps = 32/462 (6%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
++P ++IATV +AS D + + A A W +R + + ++ DA+ E L
Sbjct: 2 VDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEEL 61
Query: 99 GRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGV 157
L S GK L E+ +D F G +R L G P H + P+GV
Sbjct: 62 AALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGV 121
Query: 158 VGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAI 217
V I +N+P + W AL GN VV K + TTPL T+ + +L +EV PG +
Sbjct: 122 VAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAEVLP----PGVV 177
Query: 218 FTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD 277
GGA G A+ PR+ +VS TGS + G V + + LEL G +I+ D
Sbjct: 178 NVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFD 237
Query: 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337
DAD+ AV + A AGQ CT R+ +HES+Y + LV+ +++GDP ++ T
Sbjct: 238 DADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDT 297
Query: 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEE 396
+GPL++ R+ +E ++LTGG E G F +PT+V ++ +IV+EE
Sbjct: 298 EMGPLNSAAQRERVAGFVERAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEE 356
Query: 397 LFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGS--------DTG 448
+F PV+ V F +EA+++ N V GL+SS++TR G D G
Sbjct: 357 IFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRD----------VGRAMRLSARLDFG 406
Query: 449 IVNVNIPTNG---AEIGGAFGGEKATGGGREAGSDSWKQYMR 487
V VN T+ AE+ GG K +G G++ + + Y R
Sbjct: 407 TVWVN--THIPLAAEM--PHGGFKQSGYGKDLSIYALEDYTR 444
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 263 bits (673), Expect = 2e-82
Identities = 146/460 (31%), Positives = 228/460 (49%), Gaps = 26/460 (5%)
Query: 27 GKWKAHGP--TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVV 84
G+W+ T+ +NP + +A + AS ED +E +A + A K W +R E++
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEIL 60
Query: 85 RQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERP 144
+ L E+ + L E G + E + + A ++ G ++PS+ P
Sbjct: 61 EKAAQILEERRDEIVEWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVP 120
Query: 145 ---NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
N + E PLGVVGVI+ +NFP + + AL GN VV K A TP IT +
Sbjct: 121 GKENRVYRE---PLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTP-ITGGL- 175
Query: 202 KLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
L++++FE LP + G G+EIG A + P L+SFTGST VG + + +
Sbjct: 176 -LLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHL 234
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
K LEL GNN ++++DADI AV + +F GQ C R+++HE +Y +++
Sbjct: 235 KKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKF 294
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQ 380
V+ K + GDP + T++GPL IE +G +L GG EGN ++
Sbjct: 295 VERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLE 351
Query: 381 PTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE---NI 436
PT+ +++ +I +EE+F PV ++K EEA+++ N GLS ++FT E
Sbjct: 352 PTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQF 411
Query: 437 FKWLGPHGSDTGIVNVN-IPTNGAEIGGAFGGEKATGGGR 475
+ D G+ ++N P N E FGGEK +G GR
Sbjct: 412 AR-----RIDAGMTHINDQPVND-EPHVPFGGEKNSGLGR 445
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 261 bits (669), Expect = 6e-82
Identities = 148/478 (30%), Positives = 236/478 (49%), Gaps = 42/478 (8%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
I P + +ATV A ED + +K+ A K W +RG ++R+ D LRE+ +
Sbjct: 2 IEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEI 61
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGV 157
RL +I+ GK + E ++ D ++ GL+ L+G +P P T PLGV
Sbjct: 62 ARLETIDNGKPIEEARVDIDSSADCLEYYAGLAPTLSGEHVP--LPGGSFAYTRREPLGV 119
Query: 158 VGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAI 217
I A+N+P + W + AL CGN +V+K +P TPL + L++E+ LP +
Sbjct: 120 CAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTAL----LLAEILTEAGLPDGV 175
Query: 218 FTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD 277
F GG E GQ + + P ++ VSFTGS G V + LEL G + +II D
Sbjct: 176 FNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFD 235
Query: 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337
DAD++ AV + A + GQ C+ R+ + SI ++LV+ K+++IGDPL++ T
Sbjct: 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDT 295
Query: 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE-----GNFVQPTI-VEISPTAD 391
+G L + E + IE+ K +G K+L GG + E G +V P + + +
Sbjct: 296 QMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMT 355
Query: 392 IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK------------- 438
IV+EE+F PV+ ++ F T EE ++ N GL++ +FTR ++ +
Sbjct: 356 IVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTR---DLQRAHRVIAQLQAGTC 412
Query: 439 WLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496
W+ + I V +P FGG K +G GRE G+ + + Y + T + G
Sbjct: 413 WI----NTYNISPVEVP---------FGGYKQSGFGRENGTAALEHYTQLKTVYVEMG 457
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 261 bits (669), Expect = 2e-81
Identities = 151/475 (31%), Positives = 234/475 (49%), Gaps = 25/475 (5%)
Query: 23 CFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
+ GKW G T NP + IA V + + + + +A W +L A +R
Sbjct: 27 GLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASER 86
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
+++R+ D + L +L+++E GK L E IGEV ++ ++++ G +IP
Sbjct: 87 SKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIP 146
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
S P+ +L P+GVVG IT +NFP A++ AL G VV K + TPL +A
Sbjct: 147 SPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALA- 205
Query: 201 TKLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVG--LMVQ--QT 255
+E+ + +P + G A EIG A+ P++ ++FTGST VG LM T
Sbjct: 206 ---AAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAAT 262
Query: 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
V + LEL GN I+ DDAD+ +AV+ L + +GQ C R+L+ E IY
Sbjct: 263 VK----RVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDK 318
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375
+ +++ +GD E+G GPL + + E +++ S+G K+L GG
Sbjct: 319 FAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLG 378
Query: 376 GNFVQPT-IVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
G F +PT + +++ I +EE+F PV + +F+T EEA+ I N GL++ IFTR +
Sbjct: 379 GTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQ 438
Query: 435 NIFKWLGPHGSDTGIVNVN---IPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
W + GIV VN I T A FGG K +G GRE +Y+
Sbjct: 439 RA--WRVSEALEYGIVGVNEGLISTEVA----PFGGVKQSGLGREGSKYGIDEYL 487
|
Length = 498 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 259 bits (664), Expect = 2e-81
Identities = 143/448 (31%), Positives = 213/448 (47%), Gaps = 19/448 (4%)
Query: 45 QKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSI 104
+ V A D + + A + W P +R V+R+ D L E + +
Sbjct: 2 AVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVR 61
Query: 105 EMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAF 164
E G I P+ EV I A GL Q G ++PS P + L PLGVVGVI+ F
Sbjct: 62 ESGSIRPKAGFEVGAAIGELHEAAGLPTQPQGEILPSA-PGRLSLARRVPLGVVGVISPF 120
Query: 165 NFPCAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG 223
NFP +L + AL GN VV K P TP ++ +++ +FE LP + G
Sbjct: 121 NFPL-ILAMRSVAPALALGNAVVLKPDPRTP---VSGGVVIARLFEEAGLPAGVLHVLPG 176
Query: 224 GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKL 283
GA+ G+A+ +DP ++++SFTGST VG V + + K LEL G NA+I++DDAD+ L
Sbjct: 177 GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDL 236
Query: 284 AVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLH 343
A + + A GQ C R L+HES+ +L K + +GDP LGPL
Sbjct: 237 AASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLI 296
Query: 344 TPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVL 402
+++ + G ++ GG +G F +PT++ + P EE+F PV
Sbjct: 297 NARQLDRVHAIVDDSVAAGARLEAGG---TYDGLFYRPTVLSGVKPGMPAFDEEIFGPVA 353
Query: 403 YVMKFQTFEEAVKINNSVPQGLSSSIFTRS---PENIFKWLGPHGSDTGIVNVNIPTNGA 459
V F + EEAV + N GLS+ I +R + L TG++++N T
Sbjct: 354 PVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRL-----RTGMLHINDQTVND 408
Query: 460 EIGGAFGGEKATG-GGREAGSDSWKQYM 486
E FGG A+G G R G +W+++
Sbjct: 409 EPHNPFGGMGASGNGSRFGGPANWEEFT 436
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 259 bits (665), Expect = 2e-81
Identities = 140/464 (30%), Positives = 227/464 (48%), Gaps = 18/464 (3%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKI-WMELPAPKRGEVVRQIGDALREKLH 96
+P + A + D + ++A A + W+ L +RG ++ +I +RE
Sbjct: 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLG 156
L RL S++ GK L + +V+ ++ G + +L+G IP P + + P G
Sbjct: 61 ELARLESLDTGKPLTQARADVEAAARYFEYYGGAADKLHGETIPLG-PGYFVYTVREPHG 119
Query: 157 VVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGA 216
V G I +N+P + G + AL GN VV K A PL + + E+ E LP
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLA----ELAEEAGLPAG 175
Query: 217 IFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275
G GAE G A+ P + +SFTGS + G+ V + + LEL G + I+
Sbjct: 176 ALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIV 235
Query: 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEK 335
DAD++ A+ V+ A + AGQ C+ RLL+H SIY VL++LV+ ++ +++G LE
Sbjct: 236 FADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE- 294
Query: 336 GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---SEGNFVQPTIV-EISPTAD 391
LGPL + + E + +++G +I+ GG + E + G FV PT++ ++ P +
Sbjct: 295 DPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSR 354
Query: 392 IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK--WLGPHGSDTGI 449
+ +EE+F PVL VM F EA+ + N GL + ++TR + + + G
Sbjct: 355 LAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTR---DGDRALRVA-RRLRAGQ 410
Query: 450 VNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493
V VN G I FGG K +G GRE G ++ Y + T +
Sbjct: 411 VFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVAV 454
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 259 bits (665), Expect = 1e-80
Identities = 134/429 (31%), Positives = 227/429 (52%), Gaps = 31/429 (7%)
Query: 25 VNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
+ G+ + SINP N ++ + V +A+ E E+ M+A EA + W + R +
Sbjct: 41 IGGERITTEDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARI 100
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQ---LNGSVIP 140
+ + +R + H L E GK E + E ID ++ +RQ L
Sbjct: 101 LLRAAAIIRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEY---YARQMLKLADGKPV 157
Query: 141 SERP---NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197
RP N PLGV VI+ +NFP A++ A+V GN V+ K A TP+I
Sbjct: 158 ESRPGEHNRYFYI---PLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIA 214
Query: 198 IAITKLVSEVFERNKLP-GAIFTSFC--GGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
K V EV E LP G + +F G+E+G + P+ ++FTGS +VGL + +
Sbjct: 215 ---AKFV-EVLEEAGLPAGVV--NFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYE 268
Query: 255 ---TVH--QRFGK-CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLI 308
V Q + K + E+ G +AI++ +DAD+ LA S++ +A G +GQ+C+ C R ++
Sbjct: 269 RAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIV 328
Query: 309 HESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTG 368
HE +Y VL+++V++ K++ +G+P E +GP+ S IE I + G+++ G
Sbjct: 329 HEDVYDEVLEKVVELTKELTVGNP-EDNAYMGPVINQASFDKIMSYIE-IGKEEGRLVLG 386
Query: 369 GSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSS 427
G +S+G F+QPTI ++ P A I++EE+F PV+ +K + F+ A++I N+ GL+ +
Sbjct: 387 GEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGA 446
Query: 428 IFTRSPENI 436
+ + + E++
Sbjct: 447 VISNNREHL 455
|
Length = 514 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 256 bits (655), Expect = 9e-80
Identities = 147/471 (31%), Positives = 233/471 (49%), Gaps = 17/471 (3%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
F++G++ + G T INP N + IATV A+ ED E + A A W + +RG
Sbjct: 1 FIDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGEWAAMSPMERG 60
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIP 140
++R+ D +RE+ L +L +++ GK L E I ++ D+ +F GL+ LNG +IP
Sbjct: 61 RILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEIIP 120
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
P+ PLGV I A+N+P + W AL GN +V+K + TPL + +
Sbjct: 121 LGGPSFAYTIR-EPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKV 179
Query: 201 TKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
+++ E LP +F G GAE+G + P ++ VSFTG G +
Sbjct: 180 AEIMEEA----GLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGH 235
Query: 260 FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319
+EL G + +I+ DDAD++ AV + +AGQ C+ R+ +H+ I + L +
Sbjct: 236 LKHVTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLAR 295
Query: 320 LVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SE 375
LV+ +++K+GDP ++ T +GPL + R IE K++G + TGG E
Sbjct: 296 LVERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQN 355
Query: 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
G FV+PT+ + + IV+EE+F PV+ V+ F +E + N GL+ +FT
Sbjct: 356 GFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLG 415
Query: 435 NIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQY 485
+ + G V +N N FGG K +G GRE G + Y
Sbjct: 416 RAHRVA--DQLEAGTVWIN-TYNLYPAEAPFGGYKQSGIGRENGKAALAHY 463
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 254 bits (650), Expect = 5e-79
Identities = 143/453 (31%), Positives = 225/453 (49%), Gaps = 20/453 (4%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
INP Q I V + D + + A A W PA +RG+++ +I DAL + L
Sbjct: 2 INPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEEL 61
Query: 99 GRLLSIEMGKIL-PEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGV 157
RLL++E G L + E + D+ + GL+ +L G +P P+ + PLGV
Sbjct: 62 ARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPF-GPDVLTYTVREPLGV 120
Query: 158 VGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAI 217
VG I +N P + ALV GN VV K A PL + + +++++V LP +
Sbjct: 121 VGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-----LPAGV 175
Query: 218 FTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIM 276
G G E G A+ P + V+FTGST+VG ++ + R LEL G + +I+
Sbjct: 176 LNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVF 235
Query: 277 DDADIKLAVRSVLFAAVGT-AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEK 335
DAD+ AV + T GQ CT RL +HE IY L++LV ++KIGDPL++
Sbjct: 236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDE 295
Query: 336 GTLLGPLHTPESRKNFEKGIE-NIKSQGGKILTGGS----VIESEGNFVQPTIVE-ISPT 389
T +G + + + I+ + + G +L GG ++G FVQPTI +
Sbjct: 296 ATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNE 355
Query: 390 ADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL-GPHGSDTG 448
+ +EE+F PVL + ++ +E + + N GL++ ++TR ++ + L H + G
Sbjct: 356 WRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTR---DLGRALRAAHALEAG 412
Query: 449 IVNVNIPTNGAEIGGAFGGEKATGGGREAGSDS 481
V VN G + G ++GG K +G GREA +
Sbjct: 413 WVQVN-QGGGQQPGQSYGGFKQSGLGREASLEG 444
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 254 bits (652), Expect = 1e-78
Identities = 139/485 (28%), Positives = 225/485 (46%), Gaps = 23/485 (4%)
Query: 22 GCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
+NG+ G I+P + + I V A ED + + + A W P +R
Sbjct: 34 IPIINGEETETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEER 93
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI- 139
E++ + D L L L + E GK L + EV+E ID C + +R+L
Sbjct: 94 AEILEKAADLLEANRGELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPEL 153
Query: 140 --PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197
P+ N + L GV I+ +NFP A+ AL GN V+ K A TPLI
Sbjct: 154 PGPTGELNGLELH---GRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIA 210
Query: 198 IAITKLVSEVFERNKLPG-AIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
+L +P + G EIG+A+ PRI V FTGST+ ++ + +
Sbjct: 211 ARAVEL----LHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRAL 266
Query: 257 HQRFGK--CLL-ELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+R G L+ E G NA+I+ A + AV+ V+ +A G+AGQRC+ R L + E I
Sbjct: 267 AERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIA 326
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
+ ++ L +K+GDP + T +GPL + K E ++ + ++ + +
Sbjct: 327 ERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGE-AWLIAPAPLDD 385
Query: 374 SEGNFVQPTIVEISPTADIVKEELFAPVLYVMKF--QTFEEAVKINNSVPQGLSSSIFTR 431
G FV P I+EI D+ E+F P+L+V++F + +EA++ N+ GL+ I +R
Sbjct: 386 GNGYFVAPGIIEIVGIFDL-TTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSR 444
Query: 432 SPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGEKATGGGREAGSDSW-KQYMRRS 489
I W + G + +N GA +G FGG +G G +AG ++ ++
Sbjct: 445 DEREIEYWR--ERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEK 502
Query: 490 TCTIN 494
T ++N
Sbjct: 503 TVSLN 507
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 251 bits (643), Expect = 3e-78
Identities = 128/411 (31%), Positives = 205/411 (49%), Gaps = 13/411 (3%)
Query: 72 WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLS 131
W L +R ++R+ + L+ L RL+S E GK L E EV + D ++
Sbjct: 16 WAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAY 75
Query: 132 RQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI--ALVCGNCVVWKG 189
+ G + + P GV+ V FNFP L N I AL+ GN VV+K
Sbjct: 76 HERTGER-ATPMAQGRAVLRHRPHGVMAVFGPFNFP-GHLP-NGHIVPALLAGNTVVFKP 132
Query: 190 APTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG 249
+ TP A+ +L+ E++E LP + GG E G+A+A I + FTGS G
Sbjct: 133 SELTP----AVAELMVELWEEAGLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATG 188
Query: 250 LMVQQTVHQRFGKCL-LELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLI 308
L++ + R GK L LE+ GNN +++ D ADI A ++ +A TAGQRCT RRL++
Sbjct: 189 LLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIV 248
Query: 309 HESIY-QTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILT 367
+ L++LV+ K+++IG P + +GPL + + +++ + GG+ L
Sbjct: 249 PDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLL 308
Query: 368 GGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSS 427
+ + F+ P I++++ AD+ EE+F P+L V ++ F+EA+ + N+ GLS+
Sbjct: 309 AMERLVAGTAFLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAG 368
Query: 428 IFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAG 478
+ + +F+ GIVN N PT GA FGG +G R +
Sbjct: 369 LLSDDEA-LFERFLAR-IRAGIVNWNRPTTGASSTAPFGGVGLSGNHRPSA 417
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 252 bits (645), Expect = 3e-78
Identities = 139/447 (31%), Positives = 215/447 (48%), Gaps = 18/447 (4%)
Query: 36 VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95
+ NP + +A V A +D EE + A +A + LPA +R ++ L E+
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERF 60
Query: 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP---SER-PNHMMLET 151
L + +E GK + + GEV ID A + ++ G V+P S R L
Sbjct: 61 EELAETIVLEAGKPIKDARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVR 120
Query: 152 WNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERN 211
P+G V IT FNFP ++ A+ G V K A TPL + ++ EV
Sbjct: 121 RFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSAL----ILGEVLAET 176
Query: 212 KLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271
LP F+ + + D RI L+SFTGS VG ++ ++ K +LEL GN
Sbjct: 177 GLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGKK--KVVLELGGNA 234
Query: 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331
A+I+ DAD+ A + ++F A AGQ C + +R+L+H S+Y +LV K +K GD
Sbjct: 235 AVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGD 294
Query: 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-ISPTA 390
P + T +GP+ + + E + G K+LTGG +G ++PTI+E + P
Sbjct: 295 PKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDM 351
Query: 391 DIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIV 450
++ EE+F PV+ V + F+EA+ N GL + +FTR E + + G V
Sbjct: 352 EVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWD--ELEVGGV 409
Query: 451 NVN-IPTNGAEIGGAFGGEKATGGGRE 476
+N +PT + +GG K +G GRE
Sbjct: 410 VINDVPTFRVD-HMPYGGVKDSGIGRE 435
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 251 bits (643), Expect = 4e-78
Identities = 141/450 (31%), Positives = 217/450 (48%), Gaps = 20/450 (4%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
INP I + A+ ED + ++A A W + +R + +R I + +RE+ L
Sbjct: 2 INPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREEL 61
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN---GSVIPSERPNHMMLETWNPL 155
L + + GK L E +V +V ++ L+ QL+ +P + P+
Sbjct: 62 AELEARDNGKPLDEAAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPV 121
Query: 156 GVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215
GVVG+IT +NFP + W AL G VV K + T L + + ++ +E LP
Sbjct: 122 GVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEA----GLPP 177
Query: 216 AIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274
+ G G E G +A P I +SFTGST G V Q Q LEL G + II
Sbjct: 178 GVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPII 237
Query: 275 IMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334
+ DDAD++ AV +F GQ C+ RLL+HESI L++L + +++GDPLE
Sbjct: 238 VFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLE 297
Query: 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTI-VEISPTAD 391
+G LGPL + + I K +G ++L GG +G F+ PT+ ++ +
Sbjct: 298 EGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSR 357
Query: 392 IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE---NIFKWLGPHGSDTG 448
I +EE+F PVL V F T +EA+ + N GL++++ +R E + + L + G
Sbjct: 358 IWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEAL-----EAG 412
Query: 449 IVNVNIPTNGAEIGGAFGGEKATGGGREAG 478
IV +N +GG K +G GRE G
Sbjct: 413 IVWINCS-QPCFPQAPWGGYKRSGIGRELG 441
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 251 bits (643), Expect = 4e-78
Identities = 139/467 (29%), Positives = 229/467 (49%), Gaps = 21/467 (4%)
Query: 31 AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDA 90
AHG V+ + + V A+ + +++G W + +R V+ ++ D
Sbjct: 5 AHGVVVARYAEGTVEDVDAAVAAARKAFDKGP---------WPRMSGAERAAVLLKVADL 55
Query: 91 LREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLE 150
+R + L + ++E GK + + GE++ D+ +A L+R L+G + + + L
Sbjct: 56 IRARRERLALIETLESGKPISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLV 115
Query: 151 TWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFER 210
P+GVVG+IT +NFP +L AL G VV K + T T+ + +L+ E
Sbjct: 116 LREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEA--- 172
Query: 211 NKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSG 269
LP + G GA +GQA+ + P + +VSFTGST+VG + + K LEL G
Sbjct: 173 -GLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGG 231
Query: 270 NNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329
N I+ DAD+ A +V+F AG+ C + RLL+HESI + +V ++V++
Sbjct: 232 KNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRV 291
Query: 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES-EGNFVQPTIV-EIS 387
GDPL+ T +G + ++ +++G +L GG + S G F QPTI +++
Sbjct: 292 GDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVT 351
Query: 388 PTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDT 447
P I +EE+F PVL V+ F T +EA+ + N GLS+ ++++ +
Sbjct: 352 PDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTAL--TVARRIRA 409
Query: 448 GIVNVN-IPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493
G V VN E+ FGG K +G GRE G ++Y T +
Sbjct: 410 GTVWVNTFLDGSPEL--PFGGFKQSGIGRELGRYGVEEYTELKTVHL 454
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 250 bits (641), Expect = 7e-78
Identities = 132/443 (29%), Positives = 214/443 (48%), Gaps = 15/443 (3%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
NP + + I V D EE + ++ LP +R ++ + D L+++
Sbjct: 4 HNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEF 63
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE----RPNHMMLETWNP 154
++++ E GK + + EV ID A + ++ G IP + N + P
Sbjct: 64 AKIIACEGGKPIKDARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREP 123
Query: 155 LGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLP 214
+GVV IT FNFP ++ A+ G VV K A TPL + + K++ E
Sbjct: 124 VGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEA---GVPE 180
Query: 215 GAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274
G + +G A A D R++++SFTGS VG + + + LEL GN +I
Sbjct: 181 GVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEAL--RANAGGKRIALELGGNAPVI 238
Query: 275 IMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334
+ DAD+ A+ ++ AGQ C + +R+ +HE +Y ++ V K++K+GDPL+
Sbjct: 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLD 298
Query: 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISP-TADIV 393
+ T +GPL + E+ + E+ +E G ++L GG E +G +PT++E P +
Sbjct: 299 EDTDVGPLISEEAAERVERWVEEAVEAGARLLCGG---ERDGALFKPTVLEDVPRDTKLS 355
Query: 394 KEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVN 453
EE F PV+ ++++ FEEA++I NS GL + IFTR FK + G V VN
Sbjct: 356 TEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFK--AAEKLEVGGVMVN 413
Query: 454 IPTNGAEIGGAFGGEKATGGGRE 476
+ FGG K +G GRE
Sbjct: 414 DSSAFRTDWMPFGGVKESGVGRE 436
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 251 bits (642), Expect = 2e-77
Identities = 138/483 (28%), Positives = 244/483 (50%), Gaps = 18/483 (3%)
Query: 24 FVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
+NG+ + SINP + ++ + TV +AS E E ++A ++A + W + +R
Sbjct: 36 VINGERVETENKIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEAWKKTDPEERAA 95
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE 142
++ + +R + H LL E+GK E EV E ID ++ +L +
Sbjct: 96 ILFKAAAIVRRRRHEFSALLVKEVGKPWNEADAEVAEAIDFMEYYARQMIELAKGKPVNS 155
Query: 143 RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202
R + P GV VI+ +NFP A++ +V GNCVV K A P+I
Sbjct: 156 REGETNQYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFV- 214
Query: 203 LVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ------QT 255
E+ E LP + G G+E+G + P+ SL++FTGS +VG + Q
Sbjct: 215 ---EILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQP 271
Query: 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
+ + + E+ G + +I+ +DADI+LA +S +A G AGQ+C+ R ++HE +Y
Sbjct: 272 GQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDE 331
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375
V+++ V++ + +K+G P +GP+ +S + IE K++ G++++GG +S+
Sbjct: 332 VVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAE-GRLVSGGCGDDSK 390
Query: 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
G F+ PTI ++ A + +EE+F PV+ ++ F+EA++I N+ GL+ + + + +
Sbjct: 391 GYFIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRD 450
Query: 435 NIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGEKATGGGREAGS-DSWKQYMRRSTCT 492
+I + + G + N GA +G FGG K +G +AG D +M+ T T
Sbjct: 451 HINR--AKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAGGPDYLALFMQAKTVT 508
Query: 493 INY 495
+
Sbjct: 509 EMF 511
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 249 bits (637), Expect = 2e-77
Identities = 137/450 (30%), Positives = 222/450 (49%), Gaps = 10/450 (2%)
Query: 40 NPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99
NP + I +V + +++ E ++A EA K W A +R ++R+ + + E L
Sbjct: 3 NPATGEIIGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDDLA 62
Query: 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVG 159
RL+++E GK L E GE+ ++ ++++ G IPS + + ++ P+GV
Sbjct: 63 RLITLENGKPLKEAKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGVCA 122
Query: 160 VITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFT 219
IT +NFP A++ A AL G VV K A TPL +A+ +L + +P +
Sbjct: 123 AITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQA----GIPKGVLN 178
Query: 220 SFCG--GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD 277
G E+G + P + +SFTGST VG ++ + K +EL GN I+ D
Sbjct: 179 VITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFD 238
Query: 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337
DAD+ AV + + AGQ C RL +H+ IY +L + K++K+G+ L++G
Sbjct: 239 DADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGV 298
Query: 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTI-VEISPTADIVKEE 396
GPL ++ + EK I + +G K++TGG E GNF +PT+ ++ + KEE
Sbjct: 299 TQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEE 358
Query: 397 LFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPT 456
F P+ V KF EE + I N GL++ F+R I W + G+V +N
Sbjct: 359 TFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRI--WRVAEALEYGMVGINTGL 416
Query: 457 NGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
+ FGG K +G GRE ++Y+
Sbjct: 417 ISNVV-APFGGVKQSGLGREGSKYGIEEYL 445
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 248 bits (635), Expect = 1e-76
Identities = 149/485 (30%), Positives = 237/485 (48%), Gaps = 48/485 (9%)
Query: 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
G F+NGKW + + +INP + +A+V++A ED + + A A + W LP
Sbjct: 23 GHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHV 82
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCD-------------F 126
R + +I +++ L S++ GK ++E D CD +
Sbjct: 83 RARHLYRIARHIQKHQRLFAVLESLDNGK-------PIRESRD-CDIPLVARHFYHHAGW 134
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
A L +L G W P+GVVG I +NFP +L W C AL GN VV
Sbjct: 135 AQLLDTELAG---------------WKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVV 179
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
K A TPL + L +E+ LP + G G A+A P + V+FTGST
Sbjct: 180 LKPAEYTPLTAL----LFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGST 235
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG +++ K LEL G + I+ DDAD+ AV ++ A GQ C RL
Sbjct: 236 EVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRL 295
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
L+ ES+ + ++ +L + +++GDPL+K +G + P K + +E +++G +
Sbjct: 296 LVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVF 355
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
G+ + S+G F PT+ + P + I +EE+F PVL V+ F+T +EAV + N+ P GL+
Sbjct: 356 QPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLA 415
Query: 426 SSIFTRSPENIFKWLG-PHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQ 484
+S+++ EN+ L G+V +N N + FGG + +G GRE G + +
Sbjct: 416 ASVWS---ENLSLALEVALSLKAGVVWIN-GHNLFDAAAGFGGYRESGFGREGGKEGLYE 471
Query: 485 YMRRS 489
Y+R S
Sbjct: 472 YLRPS 476
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 247 bits (634), Expect = 1e-76
Identities = 135/464 (29%), Positives = 216/464 (46%), Gaps = 29/464 (6%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPKRGEVVRQIGDALREKLH 96
INP + I T +A D + + A A + W A +R +RQ+ +AL +
Sbjct: 2 INPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDW-STDAEERARCLRQLHEALEARKE 60
Query: 97 HLGRLLSIEMGKILP-EGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLET---- 151
L LL E+G + +V I + L+
Sbjct: 61 ELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVR 120
Query: 152 WNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERN 211
P+GVV IT +NFP + AL GN VV K AP TPL + + ++++E
Sbjct: 121 REPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAET---- 176
Query: 212 KLPGAIF---TSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS 268
LP + T +G+A+ DPR+ +VSFTGST VG + + LLEL
Sbjct: 177 DLPAGVVNVVTG--SDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELG 234
Query: 269 GNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328
G +A I++DDAD+ A + + + AGQ C RLL+ S Y V++ L ++ +
Sbjct: 235 GKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALP 294
Query: 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES--EGNFVQPTI-VE 385
+GDP + GT++GPL + R E I + +G +++TGG +G +V+PT+ +
Sbjct: 295 VGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFAD 354
Query: 386 ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE---NIFKWLGP 442
+ I +EE+F PVL V+ + +EAV+I N GLS +++ + + + +
Sbjct: 355 VDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRI-- 412
Query: 443 HGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
TG V +N G FGG K +G GRE G + ++++
Sbjct: 413 ---RTGSVGIN-GGGGYGPDAPFGGYKQSGLGRENGIEGLEEFL 452
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 2e-76
Identities = 118/406 (29%), Positives = 194/406 (47%), Gaps = 20/406 (4%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
I+P++ IA ASLE ++ A K W +P +R +V + + L +
Sbjct: 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEI 60
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLE---TWNPL 155
L+ +MG+ + + GE++ +++ + + ++ P E PL
Sbjct: 61 AEELTWQMGRPIAQAGGEIRGMLERARY---MISIAEEALADIRVPEKDGFERYIRREPL 117
Query: 156 GVVGVITAFNFP--CAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
GVV +I +N+P AV NA I AL+ GN V+ K +P TPL F
Sbjct: 118 GVVLIIAPWNYPYLTAV---NAVIPALLAGNAVILKHSPQTPLCGERFAAA----FAEAG 170
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
LP +F E A+ DPRI VSFTGS G +Q+ RF K LEL G +
Sbjct: 171 LPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDP 230
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332
+ DAD+ A S++ A +GQ C + R+ +HESIY ++ V V K K+GDP
Sbjct: 231 AYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDP 290
Query: 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG---SVIESEGNFVQPTI-VEISP 388
L+ T LGP+ + + I + ++G + L G ++ G ++ PT+ +
Sbjct: 291 LDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDH 350
Query: 389 TADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
+ +++EE F PV+ +MK ++ EA+ + N GL++S++T+
Sbjct: 351 SMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIA 396
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 248 bits (634), Expect = 2e-76
Identities = 146/491 (29%), Positives = 235/491 (47%), Gaps = 27/491 (5%)
Query: 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
G F++G++ G T +++P N+ + +V D + KA EA K W EL A +
Sbjct: 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAE 61
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCD----FAVGLSRQLN 135
R + +I D + + + L ++ G+ L + Q+VI + FA ++
Sbjct: 62 RKRYLHKIADLIEQHADEIAVLECLDCGQPLRQ---TRQQVIRAAENFRFFADKCEEAMD 118
Query: 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195
G P H+ P+G VG+IT +N P + W AL GN VV K A +PL
Sbjct: 119 GRTYPV--DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPL 176
Query: 196 ITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
T A ++E+ + LP +F G G E G+A+ P + VSFTG T G ++ +
Sbjct: 177 -TAAR---LAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMR 232
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ +EL G + +I+ DDAD++ A+ +V+F G+RCT RLL+ ESI +
Sbjct: 233 NGADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAE 292
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
+++LV+ + +++G PL+ T +GPL PE +E + +G IL GG +
Sbjct: 293 DFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPT 352
Query: 375 E-------GNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSS 426
GN+V PT+ I +EE+F PVL V+ F+ EEA++ N GL+
Sbjct: 353 FRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAG 412
Query: 427 SIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
++T + + G++ VN N + FGG KA+G GRE G+ S+ Y
Sbjct: 413 YVWTNDVGRAHRV--ALALEAGMIWVN-SQNVRHLPTPFGGVKASGIGREGGTYSFDFYT 469
Query: 487 RRSTCTINYGN 497
+ G
Sbjct: 470 ETKNVALALGP 480
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 245 bits (627), Expect = 2e-75
Identities = 150/487 (30%), Positives = 249/487 (51%), Gaps = 26/487 (5%)
Query: 22 GCFVNGKW-KAH-GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-IWMELPAP 78
G F+N ++ K+ G T+ ++NP + IA+V A ED ++ +KA +A + W ++
Sbjct: 9 GLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGE 68
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGKIL-PEGIGEVQEVIDMCDFAVGLSRQLNGS 137
+RGE++ ++ D + + L + +++ GK +G++ E+I + + G + ++ G
Sbjct: 69 ERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGK 128
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197
IP+ PN + P GV G I +N+P A+ W AL GN VV K A TPL
Sbjct: 129 TIPTS-PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSL 187
Query: 198 IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
+ LV E P + G GA G A+A+ P + ++FTGST G +V +
Sbjct: 188 LYFANLVKEA----GFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAA 243
Query: 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
Q LE G + ++ +DAD+ AV+ + +GQ CT R+ + ESIY
Sbjct: 244 AQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKF 303
Query: 317 LDQLVDVYKQV-KIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV---I 372
+++ V+ KQ K+G P + T++GP + IE K +G K++ GG
Sbjct: 304 VEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEG 363
Query: 373 ESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+G F+ PTI ++ IVKEE+F PV+ + KF+T+EEA+K N GL++++FT
Sbjct: 364 LGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFT- 422
Query: 432 SPENIFKWLGPHGS----DTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487
++I + H + G+V +N +N +++G FGG K +G GRE G + Y +
Sbjct: 423 --KDIRR---AHRVARELEAGMVWIN-SSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQ 476
Query: 488 RSTCTIN 494
IN
Sbjct: 477 TKAVHIN 483
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 244 bits (624), Expect = 6e-75
Identities = 150/483 (31%), Positives = 232/483 (48%), Gaps = 25/483 (5%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W G T +INP +KI V E D ++ +KA A K+ W + A
Sbjct: 10 FINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDAS 69
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGS 137
+RG ++ ++ D + +L L +++ GK + ++ I + + G + +++G
Sbjct: 70 ERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGK 129
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197
IP + + P+GV G I +NFP + W AL CGN VV K A TPL
Sbjct: 130 TIPMD-GDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTA 188
Query: 198 IAITKLVSEV-FER---NKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253
+ + L+ E F N +PG G G AI+ P I V+FTGST+VG ++Q
Sbjct: 189 LYLASLIKEAGFPPGVVNVVPGY-------GPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241
Query: 254 QTV-HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESI 312
Q + LEL G + I+ DAD+ AV A GQ C R + ESI
Sbjct: 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESI 301
Query: 313 YQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI 372
Y + + V+ K+ +G+P + T GP E K + IE+ K +G K+ GG
Sbjct: 302 YDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRH 361
Query: 373 ESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+G F+QPT+ +++ I KEE+F PV + KF+T +E ++ N+ GL++++FT+
Sbjct: 362 GDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTK 421
Query: 432 SPENIFKWLG-PHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490
+I K + + G V VN N FGG K +G GRE G ++Y T
Sbjct: 422 ---DIDKAITFSNALRAGTVWVNCY-NVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKT 477
Query: 491 CTI 493
TI
Sbjct: 478 VTI 480
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 242 bits (620), Expect = 1e-74
Identities = 121/460 (26%), Positives = 209/460 (45%), Gaps = 24/460 (5%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
NP + + V + + A + W L R + + + AL + L
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADEL 60
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLE------TW 152
LL E GK + EV ++ D+A + ++ P + P +++ +
Sbjct: 61 AELLHAETGKPRADAGLEVLLALEAIDWAARNAPRVLA---PRKVPTGLLMPNKKATVEY 117
Query: 153 NPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
P GVVGVI+ +N+P + AL GN VV K + TPL+ + + +
Sbjct: 118 RPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAA----G 173
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
P + G G A+ D + V+FTGS G V +R +LEL G +
Sbjct: 174 PPQGVLQVVTGDGATGAALI-DAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDP 232
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332
+I++ DAD++ A + ++ A+ AGQ C + R+ +HES+Y + +LV + ++ G
Sbjct: 233 MIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGAD 292
Query: 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTI-VEISPTAD 391
+GP+ T + +++ ++G K LTGG+ G F +PT+ ++ D
Sbjct: 293 DIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMD 352
Query: 392 IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN---IFKWLGPHGSDTG 448
+++EE F PVL VM +EA+ + N GLS+S+F+R I + L + G
Sbjct: 353 VMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRL-----EAG 407
Query: 449 IVNVN-IPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487
V++N + FGG K +GGGR G++ +++ R
Sbjct: 408 AVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCR 447
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 242 bits (619), Expect = 1e-74
Identities = 134/462 (29%), Positives = 222/462 (48%), Gaps = 23/462 (4%)
Query: 40 NPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99
NP + + TV + E E + + L +R ++ + L +
Sbjct: 5 NPYTGEVVGTVPAGTEEALREALALAASYRS---TLTRYQRSAILNKAAALLEARREEFA 61
Query: 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNH----MMLETWNPL 155
RL+++E G L + EV D+ FA + + +G + + + PL
Sbjct: 62 RLITLESGLCLKDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPL 121
Query: 156 GVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215
GVV IT FN P + A+ N +V K + TPL I + L+ E LP
Sbjct: 122 GVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEA----GLPP 177
Query: 216 AIFTSFCGG-AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274
+ + G EIG + P + LV+FTG VG + T + + LLEL GN+ +I
Sbjct: 178 DMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAGYK--RQLLELGGNDPLI 235
Query: 275 IMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334
+MDDAD++ A + + +GQRCT +R+L+HES+ +D LV+ + +GDP++
Sbjct: 236 VMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMD 295
Query: 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-ISPTADIV 393
T +G + E+ E +E +QG ++L G + +G PT+++ + P A++V
Sbjct: 296 PATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGN---QRQGALYAPTVLDHVPPDAELV 352
Query: 394 KEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVN 453
EE F PV V++ + +EA+ I+NS GLSS + T + I + + D G VNVN
Sbjct: 353 TEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLV--ERLDVGTVNVN 410
Query: 454 -IPTNGAEIGGAFGGEKATG-GGREAGSDSWKQYMRRSTCTI 493
+P +E+ FGG K +G GG+E ++ K+ T ++
Sbjct: 411 EVPGFRSEL-SPFGGVKDSGLGGKEGVREAMKEMTNVKTYSL 451
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 242 bits (620), Expect = 2e-74
Identities = 145/472 (30%), Positives = 228/472 (48%), Gaps = 16/472 (3%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPAPK 79
F+NG++ A G T +I+P N + IA V E ED + +KA +A W + +
Sbjct: 7 FINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYE 66
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSV 138
R ++ + D L + L L + + GK + EV + + G + +++G
Sbjct: 67 RSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMT 126
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+P++ P H + P+GVVG I +NFP + W AL CGN +V K A TPL +
Sbjct: 127 LPADGP-HHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSAL 185
Query: 199 AITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
KL +E LP + G G G AIA + V+FTGST+VG ++ Q
Sbjct: 186 LAAKLAAEA----GLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAA 241
Query: 258 Q-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ LEL G + I+ +DAD+ AV FA GQ C R +HESIY
Sbjct: 242 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEF 301
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+++ + +GDP KG GP E + IE+ K +G ++TGG I S+G
Sbjct: 302 VEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKG 361
Query: 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435
++QPTI ++ I ++E+F PV ++KF+T +E +K N+ GL++ +F+++ +
Sbjct: 362 YYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDT 421
Query: 436 IFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487
G V VN + + FGG K +G GRE G + Y++
Sbjct: 422 ANTLS--RALKAGTVWVNC-YDVFDASIPFGGYKMSGIGREKGIYALNNYLQ 470
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 238 bits (609), Expect = 4e-73
Identities = 139/466 (29%), Positives = 213/466 (45%), Gaps = 35/466 (7%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKL 95
SI+P + I T + + + E + A A W P R V+ ++ DA
Sbjct: 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAHDPR-LRARVLLELADAFEANA 59
Query: 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPL 155
L RLL++E GKIL E E+ I + GL+R G +I E P L P+
Sbjct: 60 ERLARLLALENGKILGEARFEISGAISELRYYAGLARTEAGRMIEPE-PGSFSLVLREPM 118
Query: 156 GVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215
GV G+I +N P +L + AL G VV K A T I AI ++++E+ LP
Sbjct: 119 GVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEI---PSLPA 175
Query: 216 AIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274
+ F G+E + P + ++SFTGST G + + LEL G I
Sbjct: 176 GVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCI 235
Query: 275 IMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334
+ DDAD+ A+ + A AGQ C R+L+ SI V D+L VK+G L+
Sbjct: 236 VFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLD 295
Query: 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGK-ILTGGSVIE--SEGNFVQPTIVEIS-PTA 390
+ +GPL + ++ +E + G + +L GG V E ++G F++PT++E+ P A
Sbjct: 296 PASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDA 355
Query: 391 DIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK----------WL 440
DIV+EE+F PVL + F EAV + N GL++S++TR + W+
Sbjct: 356 DIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWI 415
Query: 441 GPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
N AE GG + +G GR G + + ++
Sbjct: 416 NDW-------NKLFA--EAE----EGGYRQSGLGRLHGVAALEDFI 448
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 239 bits (611), Expect = 7e-73
Identities = 139/479 (29%), Positives = 225/479 (46%), Gaps = 23/479 (4%)
Query: 23 CFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+ G+W + S++P ++ + T +A + E ++A A K W + P R
Sbjct: 21 LVIGGEWVDTKERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRA 80
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF-AVGLSRQLNGSVIP 140
++ + D LR + L L+ E+GK E I +V E ID + A R +V
Sbjct: 81 RLLLKAADLLRRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEV 140
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
P + LG VI+ +NFP A+ + GN V+ K A ++
Sbjct: 141 VPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYK- 199
Query: 201 TKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
V E+F P + G G E+G + + RI ++FTGS + G + + +
Sbjct: 200 ---VFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARL 256
Query: 260 ------FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
F + +E G NAII+ + AD +L V V+ +A G GQ+C+ RL++ + Y
Sbjct: 257 APGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAY 316
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
+ VL++L+ +++ +G P E GT LGP+ E IE+ K++ G+++ GG +E
Sbjct: 317 EPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNE-GQLVLGGKRLE 375
Query: 374 SEGNFVQPTIVEI-SPTADIVKEELFAPVL--YVMKFQTFEEAVKINNSVPQGLSSSIFT 430
EG FV PT+VE P A I +EE+F PVL K F EA+++ NS P GL+ +++
Sbjct: 376 GEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYS 435
Query: 431 RSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGEKATGGGREAGSDSWKQYMRR 488
R + G + +N GA +G FGG K +G + G Y+RR
Sbjct: 436 RK-REHLEEARRE-FHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGG---PHYLRR 489
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 236 bits (604), Expect = 4e-72
Identities = 120/413 (29%), Positives = 194/413 (46%), Gaps = 8/413 (1%)
Query: 23 CFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+NG+ A G NP + +A + EAS + + A A W + +R
Sbjct: 5 LLINGELVAGEGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERA 64
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIP 140
E + ++ DA+ E RL S+ GK L + E+ ++D+ F G +R L G
Sbjct: 65 EALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAG 124
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
H + +P+GVV I +N+P + W AL GN VV K + TPL + +
Sbjct: 125 EYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKL 184
Query: 201 TKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
+L +++ PG + GA +G A+ P++ +VS TGS G V
Sbjct: 185 AELAADILP----PGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSV 240
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
+ LEL G +I+ DDAD+ V + AGQ CT R+ IY ++ +L
Sbjct: 241 KRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKL 300
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG-GKILTGGSVIESEGNFV 379
+K+GDP ++ T LGPL + R +E K+ G +++TGG + +G +
Sbjct: 301 AAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYY 360
Query: 380 QPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+PT++ +IV+ E+F PV+ V F ++AV+ N GL+SS++TR
Sbjct: 361 EPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTR 413
|
Length = 475 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 235 bits (602), Expect = 7e-72
Identities = 137/467 (29%), Positives = 226/467 (48%), Gaps = 11/467 (2%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+NG+W +G + NP N K+ +V + ++ + A + A W L A +R
Sbjct: 14 LINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERA 73
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
++R+ + + E L RL+++E GK L E GE+ ++ +++ G IP
Sbjct: 74 NILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPG 133
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
+ + ++ P+GV IT +NFP A++ A AL G +V K A TP +A+
Sbjct: 134 HQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALA 193
Query: 202 KLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
+L R +P +F G A +G + +P + +SFTGST++G + + +
Sbjct: 194 ELA----IRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 249
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
K LEL GN I+ DDAD+ AV L + AGQ C RL + + +Y ++L
Sbjct: 250 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 309
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQ 380
++ IGD LEKG +GPL ++ E+ I + +G +++ GG E GNF Q
Sbjct: 310 QQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQ 369
Query: 381 PTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKW 439
PTI V++ A + KEE F P+ + +F+ + + N GL++ + R +F+
Sbjct: 370 PTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRV 429
Query: 440 LGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
+ GIV +N E+ FGG KA+G GRE + Y+
Sbjct: 430 --GEALEYGIVGINTGIISNEV-APFGGIKASGLGREGSKYGIEDYL 473
|
Length = 482 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 235 bits (601), Expect = 8e-72
Identities = 141/471 (29%), Positives = 223/471 (47%), Gaps = 33/471 (7%)
Query: 33 GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPKRGEVVRQIGDA 90
G T ++INP + +A V D + + A A S +W L +R V+ ++ D
Sbjct: 1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60
Query: 91 LREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMML 149
+ L L +++MGK I +V + + ++ G V P+ P+ + L
Sbjct: 61 IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTG-PDALAL 119
Query: 150 ETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSE--- 206
T PLGVVG + +NFP + W AL GN VV K A +PL + + +L E
Sbjct: 120 ITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGL 179
Query: 207 ---VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK- 262
V N +PG G G+A+ + ++FTGST+VG + Q K
Sbjct: 180 PAGVL--NVVPGF-------GHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKR 230
Query: 263 CLLELSGNNAIIIMDDA-DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321
LE G + I+ DA D+ A + G+ C+ RLL+HESI L+++V
Sbjct: 231 VWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVV 290
Query: 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG---IENIKSQGGKILTGGSV--IESEG 376
++ K GDPL+ T +G L S +F+K IE+ K++G +++ GG E+ G
Sbjct: 291 AAAREWKPGDPLDPATRMGAL---VSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGG 347
Query: 377 NFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435
FV+PT+ + ++P I +EE+F PVL V+ F + EEAV + N GL++S++T
Sbjct: 348 FFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSR 407
Query: 436 IFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
+ G V VN + +I FGG K +G GR+ + +Y
Sbjct: 408 AHRVAR--RLRAGTVWVNC-FDEGDITTPFGGFKQSGNGRDKSLHALDKYT 455
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 235 bits (601), Expect = 1e-71
Identities = 148/481 (30%), Positives = 232/481 (48%), Gaps = 16/481 (3%)
Query: 22 GCFVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-SKIW-MELPA 77
G F+NG++ HG TV NP + I + EA+ D + ++ A W +++
Sbjct: 8 GLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSG 67
Query: 78 PKRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNG 136
KRG + ++ D + L +L + +++ GK +VQ D + G + +++G
Sbjct: 68 SKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHG 127
Query: 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
VI ++ + P+GV G I +NFP + W AL GN +V K + TPL
Sbjct: 128 QVIETD-IKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLS 186
Query: 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV-QQ 254
+ +TKL+ E P + G G G AI+ I V+FTGST VG V +
Sbjct: 187 ALYMTKLIPEA----GFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEA 242
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
K LEL G + I+ DDAD++ AV + GQ C R+ + E IY
Sbjct: 243 AAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYD 302
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
+ + + K++K+GDP + T GP + + IE+ K++G + TGG +
Sbjct: 303 KFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGN 362
Query: 375 EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
EG F++PTI +++ IVKEE+F PV+ V+KF+T EEA+K N GL++++FT +
Sbjct: 363 EGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNI 422
Query: 434 ENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493
N + + G V VN N FGG K +G GRE G + + Y + I
Sbjct: 423 NNAIR--VANALKAGTVWVNC-YNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHI 479
Query: 494 N 494
N
Sbjct: 480 N 480
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 234 bits (599), Expect = 3e-71
Identities = 143/472 (30%), Positives = 229/472 (48%), Gaps = 33/472 (6%)
Query: 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
F+NG+W A G + NPVN + + + ++ ED + + A EA K W + +R
Sbjct: 4 FINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERA 63
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIP 140
++ +I D + E L L +++ GK + E + ++ ID + G+ R GS+
Sbjct: 64 NILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSE 123
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
+ + + PLGVVG I +NFP + W AL GN VV K A TPL + +
Sbjct: 124 IDE-DTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVL 182
Query: 201 TKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
+L+ ++ LP + G G+E G+ +A PRI+ ++FTGST VG ++ Q +
Sbjct: 183 MELIGDL-----LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAEN 237
Query: 260 FGKCLLELSGNNAIIIMDDADIKLA--VRSVLFAAVGTA---GQRCTTCRRLLIHESIYQ 314
LEL G + I DDA +G A G+ CT R L+ ESIY
Sbjct: 238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYD 297
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
+++ V+ ++ +K+G+PL+ T++G + + + ++ K +G ++LTGG +
Sbjct: 298 EFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTL 357
Query: 375 ----EGNFVQPTIVEISPTAD--IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
+G F +PT+++ D I +EE+F PVL V+ F+ EEA+ I N GL +
Sbjct: 358 GGLDKGYFYEPTLIK-GGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGV 416
Query: 429 FTRSPENIFKWLGPHGSDTGIVNVN----IPTNGAEIGGAFGGEKATGGGRE 476
+TR + G TG V VN P FGG K +G GRE
Sbjct: 417 WTRDINRALRV--ARGIQTGRVWVNCYHQYPA-----HAPFGGYKKSGIGRE 461
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 231 bits (591), Expect = 6e-71
Identities = 112/351 (31%), Positives = 184/351 (52%), Gaps = 7/351 (1%)
Query: 85 RQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERP 144
R+I +RE+ + L+ E GKI EV D D+ +R+ G +I S+RP
Sbjct: 2 RKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRP 61
Query: 145 NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLV 204
+L LGV I +NFP ++ AL+ GN +V K + TP IA K+V
Sbjct: 62 GENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIV 121
Query: 205 SEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263
E+ LP +F G G +GQ +A +P++++VS TGS G + + K
Sbjct: 122 DEI----GLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKV 177
Query: 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323
LEL G I+MDDAD+ LAV++++ + V +GQ C R+ + + IY +++L +
Sbjct: 178 CLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEA 237
Query: 324 YKQVKIGDPLEKGTL-LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPT 382
+ V+ G+P E+ + +GPL + + E+ + +G ++ GG +E +G + PT
Sbjct: 238 MQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPT 297
Query: 383 -IVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
++++ I+ EE F PVL V+ F T EEA+ + N GL+SSI+T++
Sbjct: 298 LLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQN 348
|
Length = 409 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 230 bits (589), Expect = 8e-70
Identities = 144/482 (29%), Positives = 241/482 (50%), Gaps = 24/482 (4%)
Query: 24 FVNGKWK-AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWME-LPAPKRG 81
+NG+WK + G T+ +P++ + I +V S + E + +A + W +P +R
Sbjct: 5 LINGEWKESSGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERI 64
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
+ + + D L+E + LL E+GK L + + EV ID + ++L+G +P
Sbjct: 65 DCLHKFADLLKENKEEVANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPG 124
Query: 142 ERPNHMMLETWN-----PLGVVGVITAFNFPCAVLGWNACI-ALVCGNCVVWKGAPTTPL 195
+ PLGVV I FN+P L + I AL+ GN VV+K A L
Sbjct: 125 DWFPGT-KGKIAQVRREPLGVVLAIGPFNYPLN-LTVSKLIPALIMGNTVVFKPATQGVL 182
Query: 196 ITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
+ I ++E F P + G G EIG + RI ++SFTGST+VG +++
Sbjct: 183 LGI----PLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKK 238
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
H + +LEL G + I++ DAD++LA + ++ A+ +GQRCT +R+L+HES+
Sbjct: 239 Q-HPM-KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVAD 296
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
+++ L + ++K+G P + G + PL P+S E I++ ++G +L GG
Sbjct: 297 ELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE-- 354
Query: 375 EGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
GN + PT+++ ++P + EE F PVL +++ EEA+++ N GL +SIFT+
Sbjct: 355 GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDI 414
Query: 434 ENIFKWLGPHGSDTGIVNVN-IPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492
K + G VN+N G + F G K +G G + D+ + RR
Sbjct: 415 NKARKLADA--LEVGTVNINSKCQRGPDH-FPFLGRKDSGIGTQGIGDALRSMTRRKGIV 471
Query: 493 IN 494
IN
Sbjct: 472 IN 473
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 229 bits (586), Expect = 3e-69
Identities = 143/483 (29%), Positives = 228/483 (47%), Gaps = 33/483 (6%)
Query: 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-----SKIWMELP 76
F+ G+W+ G + +NP + I + A+ ED + ++A +A K W
Sbjct: 11 FIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTT 70
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136
R + +R I + E+ L +L +++ GK L E ++ +V ++ L+ L+
Sbjct: 71 GAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDA 130
Query: 137 SVIPSERPNHMMLET------WNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 190
+ P + +ET PLGVVG+IT +N+P + W AL G V K +
Sbjct: 131 K---QKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPS 187
Query: 191 PTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG 249
+ + + + EV LP + G G E G +A P + ++FTGST G
Sbjct: 188 ELASVTCLELADICREV----GLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATG 243
Query: 250 LMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
+ Q LEL G + II+ DD D+ AV +F T GQ C+ RLL+H
Sbjct: 244 RKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVH 303
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369
E I L++LV K +KI DPLE+G LGP+ + + K I KS+G IL GG
Sbjct: 304 ERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGG 363
Query: 370 SVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSS 426
E +G F++PTI+ +++ + I +EE+F PVL V F T +EA+++ N GL+
Sbjct: 364 KRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAG 423
Query: 427 SIFTRSPE---NIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWK 483
++ + E + + GIV +N + +GG K +G GRE G +
Sbjct: 424 AVISNDLERCERVSEAF-----QAGIVWINC-SQPCFCQAPWGGIKRSGFGRELGEWGLE 477
Query: 484 QYM 486
Y+
Sbjct: 478 NYL 480
|
Length = 503 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 227 bits (581), Expect = 8e-69
Identities = 140/466 (30%), Positives = 230/466 (49%), Gaps = 22/466 (4%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
G F+NG+W + G T+ S NP N + ++ + +A+ D + +KA EA K W + +
Sbjct: 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAE 61
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSV 138
R ++ +I D + E L + +++ GK + E ++ D + G+ R GS
Sbjct: 62 RANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSA 121
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ + + + P+GVVG I +NFP + W AL GN VV K + TT L +
Sbjct: 122 NMIDE-DTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLL 180
Query: 199 AITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
+ K++ +V LP + G G++ G+ + P + ++FTGST+VG V
Sbjct: 181 ELAKIIQDV-----LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA 235
Query: 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
++ LEL G +A II DDA+ A+ + GQ C R+ + E IY +
Sbjct: 236 KKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFV 295
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE-- 375
+L + ++ VK+G+PL+ T +G + ++ K +G KILTGG +
Sbjct: 296 AKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGL 355
Query: 376 --GNFVQPTIVEISPTAD--IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
G F++PT++ + T D + +EE+F PV V+KF+T +E + + N GL +FT+
Sbjct: 356 DKGFFIEPTLIV-NVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTK 414
Query: 432 SPENIFKWLG-PHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGRE 476
+I + L +TG V VN N G FGG K +G GRE
Sbjct: 415 ---DINRALRVARAVETGRVWVNT-YNQIPAGAPFGGYKKSGIGRE 456
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 2e-68
Identities = 136/482 (28%), Positives = 220/482 (45%), Gaps = 59/482 (12%)
Query: 24 FVNGKW-KAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+++G W G T+ INP + I TV + D + + A A W +R
Sbjct: 2 YIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERA 61
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKIL--------PEGIGEVQEVIDMC-DFAVGLSR 132
++ +I +A + L + +++EMG + GIG ++ D DF
Sbjct: 62 ALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFE--FEE 119
Query: 133 QLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFP-----CAVLGWNACIALVCGNCVVW 187
+ S++ E P+GV G+IT +N+P V AL G VV
Sbjct: 120 RRGNSLVVRE-----------PIGVCGLITPWNWPLNQIVLKVAP-----ALAAGCTVVL 163
Query: 188 KGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGST 246
K + PL I +++E+ + LP +F G G +G+A++ P + +VSFTGST
Sbjct: 164 KPSEVAPLSAI----ILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGST 219
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
+ G V + + LEL G +A II+DDAD++ AV + A +GQ C R+
Sbjct: 220 RAGKRVAEAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRM 279
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS---QGG 363
L+ S Y + + +GDP + T LGPL S F++ I+ +G
Sbjct: 280 LVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPL---ASAAQFDRVQGYIQKGIEEGA 336
Query: 364 KILTGGS---VIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS 419
+++ GG G FV+PT+ +++P I +EE+F PVL ++ + +EA+ I N
Sbjct: 337 RLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIAND 396
Query: 420 VPQGLSSSIFTRSPE---NIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGRE 476
P GL+ +++ PE + + L G V++N G FGG K +G GRE
Sbjct: 397 TPYGLAGYVWSADPERARAVARRL-----RAGQVHIN--GAAFNPGAPFGGYKQSGNGRE 449
Query: 477 AG 478
G
Sbjct: 450 WG 451
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 224 bits (573), Expect = 2e-67
Identities = 143/481 (29%), Positives = 236/481 (49%), Gaps = 34/481 (7%)
Query: 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+++G + G T INP + +ATV A+ D E + + + KIW + A +R
Sbjct: 10 YIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERS 69
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVI---DMCDFAVGLSRQLNGSV 138
++R+ D LRE+ L L +++ GK + E V +++ D+ ++ GL+ L G
Sbjct: 70 RILRRAVDILRERNDELAALETLDTGKPIQETS--VVDIVTGADVLEYYAGLAPALEGEQ 127
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
IP R + PLGV I A+N+P + W + AL GN +++K + TPL +
Sbjct: 128 IPL-RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTAL 186
Query: 199 AITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
KL +E++ LP +F G +G + + P I+ VSFTG G V
Sbjct: 187 ---KL-AEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAA 242
Query: 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318
+ +EL G + +I+ DDAD+ A + A ++GQ CT R+ + +SI
Sbjct: 243 SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEA 302
Query: 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----S 374
+L++ ++++IGDP++ T GPL + R IE K++G ++L GG + +
Sbjct: 303 RLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFA 362
Query: 375 EGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT--- 430
G FV PT+ + + IV+EE+F PV+ V+ F +E + N GL++ +FT
Sbjct: 363 NGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADL 422
Query: 431 -RSPENIFKWLGPHGSDTGIVNVNIPTNG---AEIGGAFGGEKATGGGREAGSDSWKQYM 486
R+ I H + GI +N T G AE+ GG K +G GRE G + + Y
Sbjct: 423 SRAHRVI------HQLEAGICWIN--TWGESPAEM--PVGGYKQSGIGRENGIATLEHYT 472
Query: 487 R 487
+
Sbjct: 473 Q 473
|
Length = 488 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 216 bits (553), Expect = 1e-64
Identities = 135/492 (27%), Positives = 225/492 (45%), Gaps = 33/492 (6%)
Query: 22 GCFVNGKWKAHGPT--VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI-WMELPAP 78
G F++G+ A + NP Q IA+V A+ D + + + A W +
Sbjct: 1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPA 60
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGKI--LPEGIGEVQEVIDMCDFAVGLSRQLNG 136
+RG ++ ++ D + + L +L ++ GK L EV + + + G + ++NG
Sbjct: 61 ERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAF-EVGQSANFLRYFAGWATKING 119
Query: 137 SV----IPS---ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKG 189
IPS ER P+GVV I +NF + W AL G +V K
Sbjct: 120 ETLAPSIPSMQGERYTAFTRR--EPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKP 177
Query: 190 APTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG 249
+ TPL + + +L E +P + G +G + P ++ VSFTGS G
Sbjct: 178 SEFTPLTLLRVAELAKEA----GIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATG 233
Query: 250 LMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
+ + + LEL G NA + DADI V +L A GQ C R +H
Sbjct: 234 KKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVH 293
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEK---GIENIKSQGGKIL 366
S + ++ +L ++G P+++ + GPL ++ +F+K +++ +++G +I+
Sbjct: 294 RSKFDELVTKLKQALSSFQVGSPMDESVMFGPL---ANQPHFDKVCSYLDDARAEGDEIV 350
Query: 367 TGGSVIESEGNFVQPTIVEISPTAD-IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG + EG FVQPT+V +++EE F PV+ + ++ EE +++ N P GL+
Sbjct: 351 RGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLT 410
Query: 426 SSIFTRSPENIFKWL--GPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWK 483
+S++T N+ K L P + G V VN+ T + FGG K +G GRE GS
Sbjct: 411 ASVWT---NNLSKALRYIPR-IEAGTVWVNMHTF-LDPAVPFGGMKQSGIGREFGSAFID 465
Query: 484 QYMRRSTCTINY 495
Y + I Y
Sbjct: 466 DYTELKSVMIRY 477
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 215 bits (550), Expect = 3e-64
Identities = 131/479 (27%), Positives = 217/479 (45%), Gaps = 19/479 (3%)
Query: 22 GCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
G F G + P NP N+ V AS+++ + + + E W + +R
Sbjct: 7 GKFAEGASGTYIPVT---NPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRT 63
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
V+ + L+E + L++ E GK + +G+V +++ + A G++ L G
Sbjct: 64 SVLLRYQALLKEHRDEIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQ 123
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
+ PLGV IT FNFP + W IA+ CGN V K + P +
Sbjct: 124 VATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAV--- 180
Query: 202 KLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261
++E+F P + G E + + P + VSF GST +G + T G
Sbjct: 181 -KLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTG-SAHG 238
Query: 262 KCLLELSG-NNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
K + L G N +++M DAD A +++ AA G AGQRC ++ + + ++
Sbjct: 239 KRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEI 297
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEG 376
+ ++++IG + G +GPL TP+++ I ++G ++L G + EG
Sbjct: 298 RERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEG 357
Query: 377 NFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435
N+V PT++E + PT +EE+F PVL V++ T EEA+ + N+ P G ++IFTR
Sbjct: 358 NWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAA 417
Query: 436 IFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKAT--GGGREAGSDSWKQYMRRSTCT 492
++ H + G V VN+P +F G K + G G Y R T T
Sbjct: 418 ARRF--QHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVT 474
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 215 bits (549), Expect = 5e-64
Identities = 135/456 (29%), Positives = 218/456 (47%), Gaps = 11/456 (2%)
Query: 24 FVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
F++GKW+A G + SS NP + + AS E + A A W L +R
Sbjct: 2 FIDGKWRAGQGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIA 61
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE 142
VV++ L E+ L R+++ E GK L E EV +I ++ + G +
Sbjct: 62 VVQRFAALLEERKEALARVIARETGKPLWETRTEVASMIGKVAISIKAYHERTGES-ENP 120
Query: 143 RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202
P+ + P GVV V +NFP + + AL+ GN VV+K + TP + K
Sbjct: 121 MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVK 180
Query: 203 LVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK 262
L +E+ LP + G E G A+A P I + FTGS+ G ++ + R K
Sbjct: 181 L----WEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEK 236
Query: 263 CL-LELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY-QTVLDQL 320
L LE+ GNN +I+ + ADI AV ++ +A +AGQRCT RRLL+ + L +L
Sbjct: 237 ILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARL 296
Query: 321 VDVYKQVKIGD-PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFV 379
V+V +++ +G E +G + + ++ + + + GGK L ++ +
Sbjct: 297 VEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALL 356
Query: 380 QPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKW 439
P I++++ A++ EE F P+L V+++ F+EA+ I N+ GLS+ + + ++
Sbjct: 357 TPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDD-RELYDR 415
Query: 440 LGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGR 475
GIVN N P GA FGG A+G R
Sbjct: 416 FLLE-IRAGIVNWNKPLTGASSAAPFGGIGASGNHR 450
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 214 bits (548), Expect = 9e-64
Identities = 135/460 (29%), Positives = 224/460 (48%), Gaps = 19/460 (4%)
Query: 24 FVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
++NG W A G S NPV+ + + +A+ + ++A A W L +R
Sbjct: 4 WINGDWIAGQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQA 63
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE 142
+V + L E L +++ E GK L E EV +I+ ++ + G SE
Sbjct: 64 IVERFAALLEENKEELAEVIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKR-SE 122
Query: 143 RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI--ALVCGNCVVWKGAPTTPLITIAI 200
+ + P GVV V +NFP L N I AL+ GN VV+K + TP +
Sbjct: 123 MADGAAVLRHRPHGVVAVFGPYNFP-GHLP-NGHIVPALLAGNTVVFKPSELTP----WV 176
Query: 201 TKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
+L +++++ LP + GG E G+A+A P I + FTGS G ++ + +
Sbjct: 177 AELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP 236
Query: 261 GKCL-LELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY-QTVLD 318
K L LE+ GNN ++I + ADI AV ++ +A +AGQRCT RRLL+ + L
Sbjct: 237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLA 296
Query: 319 QLVDVYKQVKIGDPL-EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN 377
+LV V K++ +G E +G + + ++ + + + GGK L + +++
Sbjct: 297 RLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTG 356
Query: 378 FVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE--N 435
+ P I++++ A++ EE F P+L V+++ F+EA+++ N+ GLS+ + + E +
Sbjct: 357 LLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYD 416
Query: 436 IFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGR 475
F L GIVN N P GA FGG A+G R
Sbjct: 417 QF-LL---EIRAGIVNWNKPLTGASSAAPFGGVGASGNHR 452
|
Length = 487 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 214 bits (546), Expect = 1e-63
Identities = 143/495 (28%), Positives = 241/495 (48%), Gaps = 38/495 (7%)
Query: 23 CFVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAP 78
F+NG++ G T ++INP + I V A++ED + + A EA + W ++ A
Sbjct: 8 LFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNAR 67
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGS 137
RG ++ ++ D + E L + S++ G + + V I + G ++ G
Sbjct: 68 DRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGK 127
Query: 138 VIP--SERPNHMMLETW-NPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTP 194
IP RPN + T P+GV G++ +N+P +L W L GN VV K A TP
Sbjct: 128 TIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTP 187
Query: 195 LITIAITKLVSEV-FER---NKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGL 250
L + +L + F + N LPG+ G+ +GQ ++ P + + FTGST +G
Sbjct: 188 LTALKFAELTVKAGFPKGVINILPGS-------GSLVGQRLSDHPDVRKLGFTGSTPIGK 240
Query: 251 MVQQT-VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
+ ++ K LEL G + +II D D+ AVR + + G+ C RL +
Sbjct: 241 HIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVE 300
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIK---SQGGKIL 366
ESI+ + ++V+ K++KIGDPL++ T GP + + +K +E + +G ++
Sbjct: 301 ESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGP---QNHKAHLDKLVEYCERGVKEGATLV 357
Query: 367 TGGSVIESEGNFVQPTIVEISPTAD---IVKEELFAPVLYVMKFQT--FEEAVKINNSVP 421
GG ++ G F +PT+ + D I KEE F P++ + KF + ++ N
Sbjct: 358 YGGKQVDRPGFFFEPTV--FTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTE 415
Query: 422 QGLSSSIFTRSPENIFKWLG-PHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480
GL+S +FT+ +I K L + G V VN N ++ FGG K +G G++ G +
Sbjct: 416 YGLASGVFTK---DINKALYVSDKLEAGTVFVNT-YNKTDVAAPFGGFKQSGFGKDLGEE 471
Query: 481 SWKQYMRRSTCTINY 495
+ +Y++ T TI Y
Sbjct: 472 ALNEYLKTKTVTIEY 486
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 212 bits (542), Expect = 2e-63
Identities = 123/446 (27%), Positives = 215/446 (48%), Gaps = 38/446 (8%)
Query: 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMG-------KI 109
D ++ ++A + A W + P +R +++ + D L + + E G
Sbjct: 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFN 60
Query: 110 LPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCA 169
+ G ++E + Q+ G IPS++P + + P+GVV I +N P
Sbjct: 61 VDLAAGMLREAASLIT-------QIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAP-V 112
Query: 170 VLGWNA-CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLP-GA---IFTSFCGG 224
+LG A L GN VV K + +P I VF LP G + S
Sbjct: 113 ILGTRAIAYPLAAGNTVVLKASELSPRTHWLIG----RVFHEAGLPKGVLNVVTHSPEDA 168
Query: 225 AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLA 284
E+ +A+ P + V+FTGST+VG ++ +T + LLEL G I+++DAD+ A
Sbjct: 169 PEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAA 228
Query: 285 VRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHT 344
+ LF A +GQ C + R+++HESI +++L +++ G +LG L +
Sbjct: 229 ANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGP-----VVLGSLVS 283
Query: 345 PESRKNFEKGIENIKSQGGKILTGG-SVIESEGNFVQPTIVE-ISPTADIVKEELFAPVL 402
+ ++ +++ S+G K++ GG + G + PTI++ ++P DI EE F PV+
Sbjct: 284 AAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVV 343
Query: 403 YVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLG-PHGSDTGIVNVNIPTNGAEI 461
+++ + EEAV+I N GLS+++FTR ++ + L ++G V++N T E
Sbjct: 344 SIIRVKDEEEAVRIANDSEYGLSAAVFTR---DLARALAVAKRIESGAVHINGMTVHDEP 400
Query: 462 GGAFGGEKATGGGR---EAGSDSWKQ 484
GG K++G GR + G D + +
Sbjct: 401 TLPHGGVKSSGYGRFNGKWGIDEFTE 426
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 212 bits (541), Expect = 1e-60
Identities = 144/463 (31%), Positives = 227/463 (49%), Gaps = 28/463 (6%)
Query: 25 VNGKWKAHGPTVSSINPVNNQKI-ATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
VNG A G INP + I TV EA+ D E+ ++A A+ IW P +R +
Sbjct: 118 VNGAPVAGGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAI 177
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER 143
+ + D + ++ L LL E GK L I EV+E +D + G +R G+
Sbjct: 178 LERAADLMEAQMPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------ 231
Query: 144 PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKL 203
T PLG V I+ +NFP A+ AL GN V+ K A TPLI +L
Sbjct: 232 ------LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRL 285
Query: 204 VSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK 262
+ E +P + G G +G A+ D R++ V FTGST+V ++Q+ + +R G+
Sbjct: 286 LHEA----GVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGR 341
Query: 263 ---CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319
+ E G NA+I+ A + V VL +A +AGQRC+ R L + E + +L
Sbjct: 342 PIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTM 401
Query: 320 LVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE-GNF 378
L ++++G+P T +GP+ E++ N EK I+ ++S+G + + + G F
Sbjct: 402 LKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTF 461
Query: 379 VQPTIVEISPTADIVKEELFAPVLYVMKF--QTFEEAVKINNSVPQGLSSSIFTRSPENI 436
V PT++E+ D ++ E+F PVL+V+++ +E + N+ GL+ + TR E I
Sbjct: 462 VAPTLIEL-ENLDELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETI 520
Query: 437 FKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGEKATGGGREAG 478
+ G + VN GA +G FGGE +G G +AG
Sbjct: 521 AHVTE--RAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAG 561
|
Length = 769 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 205 bits (523), Expect = 2e-60
Identities = 145/473 (30%), Positives = 218/473 (46%), Gaps = 36/473 (7%)
Query: 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
F+ G+W A G +I PV + V ++ ED E + A A + W + +R
Sbjct: 4 FIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERA 63
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIP 140
++ +I D + L L + + GK + E + ++ ID + G R GS+
Sbjct: 64 NILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSI-- 121
Query: 141 SE-RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
SE N + PLGVVG I +NFP + W AL GNCVV K A TP +
Sbjct: 122 SEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILV 181
Query: 200 ITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
+ +L+ ++ LP + G G E G+ +A RI+ V+FTG T G ++ Q +
Sbjct: 182 LMELIGDL-----LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE 236
Query: 259 RFGKCLLELSGNNAII----IM--DDADIKLAVRS-VLFAAVGTAGQRCTTCRRLLIHES 311
LEL G + I +M DDA A+ V+FA G+ CT R LI ES
Sbjct: 237 NIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL--NQGEVCTCPSRALIQES 294
Query: 312 IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV 371
IY +++ ++ K +K G+PL+ T++G + E + I+ K +G ++LTGG
Sbjct: 295 IYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGER 354
Query: 372 IESEGN----FVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSS 427
E G + PT + I +EE+F PVL V F+ EEA++I N GL +
Sbjct: 355 NELGGLLGGGYYVPTTFKGGNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAG 414
Query: 428 IFTRSPENIFKWLGPHGSDTGIVNVN----IPTNGAEIGGAFGGEKATGGGRE 476
++TR ++ G G V N P AFGG K +G GRE
Sbjct: 415 VWTRDGNTAYRM--GRGIQAGRVWTNCYHLYPA-----HAAFGGYKQSGIGRE 460
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 204 bits (520), Expect = 4e-60
Identities = 122/460 (26%), Positives = 206/460 (44%), Gaps = 25/460 (5%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
P + + + +++ D E A + W P +R V + D + E+ L
Sbjct: 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDEL 60
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDF-AVGLSRQLNGSVIPSERPNHMML-----ETW 152
L+ +E GK EV +V + + A R L P R + +
Sbjct: 61 LDLIQLETGKARRHAFEEVLDVAIVARYYARRAERLLK----PRRRRGAIPVLTRTTVNR 116
Query: 153 NPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
P GVVGVI+ +N+P + +A AL+ GN VV K T L + +L+
Sbjct: 117 RPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELL----IEAG 172
Query: 213 LPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271
LP ++ G G+E+G AI V FTGST G +V + +R C LEL G N
Sbjct: 173 LPRDLWQVVTGPGSEVGGAIVD--NADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKN 230
Query: 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331
+I+++DAD+ A + A AGQ C + R+ +HES+Y + + V + +++G
Sbjct: 231 PMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGA 290
Query: 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN-FVQPTIVE-ISPT 389
L+ G +G L + +++ ++G +L GG G F +PT++ ++
Sbjct: 291 ALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTED 350
Query: 390 ADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGI 449
++ EE F PV+ + + +EA+++ N GL++S++TR + + G
Sbjct: 351 MELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRR-IAAR-LRAGT 408
Query: 450 VNVN---IPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
VNVN + I GG K +G GR G++ +Y
Sbjct: 409 VNVNEGYAAAWAS-IDAPMGGMKDSGLGRRHGAEGLLKYT 447
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 199 bits (507), Expect = 4e-58
Identities = 118/412 (28%), Positives = 188/412 (45%), Gaps = 8/412 (1%)
Query: 24 FVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
+NG+ + G NP + I + EAS E + ++A A W + R E
Sbjct: 5 LINGELVSGEGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAE 64
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPS 141
+ ++ D + E L S GK L E+ ++D+ F G +R L+G
Sbjct: 65 CLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGE 124
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
H + +PLGVV I +N+P + W AL GNCVV K + TPL + +
Sbjct: 125 YLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLA 184
Query: 202 KLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261
+L ++F G + F G +G + ++ +VS TGS G +
Sbjct: 185 ELAKDIFP----AGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIK 240
Query: 262 KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321
+ +EL G +I+ DDADI V V AGQ CT R+ IY T++++L
Sbjct: 241 RTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLG 300
Query: 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESEGNFVQ 380
+K G P ++ T LGPL + + K +E K+ G K++TGG + G +
Sbjct: 301 AAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFA 360
Query: 381 PTIVEISPTAD-IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
PT++ + D IV++E+F PV+ + F E+ V N GL+SS++T+
Sbjct: 361 PTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTK 412
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 199 bits (508), Expect = 5e-58
Identities = 149/490 (30%), Positives = 219/490 (44%), Gaps = 49/490 (10%)
Query: 24 FVNGKW-KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIW---MELPA 77
++GK T ++NP + + +A+ D + + A A W L
Sbjct: 4 LIDGKLVAGSAGTFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDTAL-- 61
Query: 78 PKRGEVVRQIGDALREKLHHLGRLLSIEMG--KILPEGIGEVQEVIDMCDFAVGLS---- 131
R +RQ+ DALR + L L E+G ++L G +++ +D FA L+
Sbjct: 62 --RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAG-AQLEGPVDDLGFAADLAESYA 118
Query: 132 -RQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFP----CAVLGWNACIALVCGNCVV 186
G P P L +GVVG IT +NFP A LG AL GN VV
Sbjct: 119 WTTDLGVASPMGIPTRRTLRR-EAVGVVGAITPWNFPHQINLAKLG----PALAAGNTVV 173
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
K AP TP + +L++E + PG + +G +AKDPR+ +VSFTGST
Sbjct: 174 LKPAPDTPWCAAVLGELIAE--HTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGST 231
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
G V K LEL G +A I++DDAD+ A F AGQ C RL
Sbjct: 232 ATGRAVMADAAATLKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRL 291
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
++ + Y + +K GDP + GT+ GP+ + R + ++ ++GG+
Sbjct: 292 VVPRARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFA 351
Query: 367 TGGSVIESE--GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQG 423
GG G FV+PT++ + A + +EE+F PVL V+ ++AV+I N P G
Sbjct: 352 CGGGRPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYG 411
Query: 424 LSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGA-------FGGEKATGGGRE 476
LS ++F PE TG VNVN GG FGG K +G GRE
Sbjct: 412 LSGTVFGADPERAAAVAA--RVRTGTVNVN--------GGVWYSADAPFGGYKQSGIGRE 461
Query: 477 AGSDSWKQYM 486
G +++Y+
Sbjct: 462 MGVAGFEEYL 471
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 199 bits (508), Expect = 5e-58
Identities = 136/475 (28%), Positives = 218/475 (45%), Gaps = 28/475 (5%)
Query: 25 VNGKWKAHGPTVSSINPVNNQ-KIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
+ +KA G NP + + + V A+L + + + +A W PA +R
Sbjct: 42 IGHSYKADGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAK 101
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER 143
+ ++ D L + L L E GK + I EV+E +D C + R + G
Sbjct: 102 LDRLADLLELHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGE------ 155
Query: 144 PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKL 203
+ GV I+ +NFP A+ AL GN V+ K A T LI +
Sbjct: 156 ------FSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIA---YRA 206
Query: 204 VSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF--- 260
V + E G I GA++G A+ DPRI+ V+FTGST+V ++ QT+ QR
Sbjct: 207 VELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAP 266
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
+ E G NA+I+ A + VR VL +A +AGQRC+ R L + E + VL +
Sbjct: 267 VPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMI 326
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI---LTGGSVIESEGN 377
+++K+G P T +GP+ E+++N IE++ KI S G
Sbjct: 327 QGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGT 386
Query: 378 FVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKIN--NSVPQGLSSSIFTRSPEN 435
FV PT+ E+ A++ EE+F PVL+V++++ E ++ N GL+ + +R
Sbjct: 387 FVAPTLFELDDIAEL-SEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETT 445
Query: 436 IFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGEKATGGGREAGSDSWKQYMRRS 489
+W+ H + G VN GA +G FGG+ +G G +AG + + +
Sbjct: 446 Y-RWIEKH-ARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQV 498
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 198 bits (504), Expect = 2e-57
Identities = 135/472 (28%), Positives = 223/472 (47%), Gaps = 16/472 (3%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
F+NG++ A G T + +P + IA + E ED + +KA EA W + +
Sbjct: 24 FINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFE 83
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSV 138
RG ++ + D + E + L L +I+ GK+ G ++ + + G + +++G
Sbjct: 84 RGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGET 143
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ R P+GVVG I +NFP + AL G +V K A TPL +
Sbjct: 144 LKMSRQLQGYTLK-EPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSAL 202
Query: 199 AITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG-LMVQQTV 256
L + +P + G G G AIA + VSFTGST+VG ++Q
Sbjct: 203 FYAHLA----KLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAA 258
Query: 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ LEL G + ++I DDAD+ +AV L G+ C R+ + E IY
Sbjct: 259 TSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEF 318
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+ +LV+ K +GDP + GP + + IE+ K +G +LTGG +G
Sbjct: 319 VKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKG 378
Query: 377 NFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435
+++PTI +++ I ++E+F PV+ +MKF+T EEA+K N+ GL++ I T+ +
Sbjct: 379 YYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDL-D 437
Query: 436 IFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487
+ + G + VN + FGG K +G GR+ G D+ +Y++
Sbjct: 438 VANTVS-RSIRAGTIWVNC-YFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQ 487
|
Length = 501 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 3e-56
Identities = 154/471 (32%), Positives = 227/471 (48%), Gaps = 37/471 (7%)
Query: 30 KAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIG 88
G T +NP + + + TV EAS ED E + A A W PA +R ++ +
Sbjct: 563 DVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAA 622
Query: 89 DALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF-AVGLSRQLNGSVIPSERPNHM 147
D + + L L E GK L I EV+E +D + A R LNG
Sbjct: 623 DLMEAHMPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLNGPGHK------- 675
Query: 148 MLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207
PLG V I+ +NFP A+ ALV GN V+ K A TPLI +L+ E
Sbjct: 676 ------PLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEA 729
Query: 208 FERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK--CL 264
+P G G +G A+ DPRI+ V FTGST+V ++Q+T+ +R G L
Sbjct: 730 ----GVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPL 785
Query: 265 L-ELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323
+ E G NA+I+ A + V V+ +A +AGQRC+ R L + E + VL L
Sbjct: 786 IAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGA 845
Query: 324 YKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI--LTGGSVIESEGNFVQP 381
+++IGDP T +GP+ E++ N E IE +++ G + L + E +G FV P
Sbjct: 846 MDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETE-KGTFVAP 904
Query: 382 TIVEISPTADIVKEELFAPVLYVMKFQTFE-EAV--KINNSVPQGLSSSIFTRSPENIFK 438
T++EI +D+ + E+F PVL+V++F+ E + V IN + GL+ + +R E I
Sbjct: 905 TLIEIDSISDL-EREVFGPVLHVVRFKADELDRVIDDINAT-GYGLTFGLHSRIDETIAH 962
Query: 439 WLGPHGSDTGIVNVNIPTNGAEIG-GAFGGEKATGGGREAGSDSWKQYMRR 488
G + VN GA +G FGGE +G G +AG Y+ R
Sbjct: 963 VTS--RIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGG---PLYLGR 1008
|
Length = 1208 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 1e-55
Identities = 144/497 (28%), Positives = 226/497 (45%), Gaps = 66/497 (13%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
+NG++ A G T +++P + IA V E ED + A +A W ++ A +
Sbjct: 61 LINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYE 120
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSV 138
R ++ + D L + L L + + GK + E+ + + G + +++G
Sbjct: 121 RSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLT 180
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+P++ P+H+ P+GV G I +NFP + W AL CGN +V K A TPL +
Sbjct: 181 VPADGPHHVQT-LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 239
Query: 199 AITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
KL+ E LP + G G G A+A + ++FTGST G +V +
Sbjct: 240 YAAKLLHEA----GLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAA 295
Query: 258 QRFGKCL-LELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ K + LEL G + I+ +DAD+ AV FA GQ C R +HE +Y
Sbjct: 296 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVY--- 352
Query: 317 LDQLVDVYK----QVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS---QGGKILTGG 369
D+ V+ K + +GDP +KG GP E FEK + IKS G + GG
Sbjct: 353 -DEFVEKAKARALKRVVGDPFKKGVEQGPQIDSE---QFEKILRYIKSGVESGATLECGG 408
Query: 370 SVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
S+G ++QPT+ + I ++E+F PV ++KF+ +E ++ N+ GL++ +
Sbjct: 409 DRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGV 468
Query: 429 FTRSPENIFKWLGPHGSDT----------GIVNVN--------IPTNGAEIGGAFGGEKA 470
FT+ N+ DT G V VN IP FGG K
Sbjct: 469 FTQ---NL---------DTANTLSRALRVGTVWVNCFDVFDAAIP---------FGGYKM 507
Query: 471 TGGGREAGSDSWKQYMR 487
+G GRE G S Y++
Sbjct: 508 SGIGREKGIYSLNNYLQ 524
|
Length = 538 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 200 bits (511), Expect = 1e-55
Identities = 128/424 (30%), Positives = 202/424 (47%), Gaps = 45/424 (10%)
Query: 24 FVNGKWKAHGPTVSSI-------NPVNN-QKIATVVEASLEDYEEGMKACSEASKIWMEL 75
F+ +W+A GP ++ +P + + + V A E E+ + A A W
Sbjct: 546 FLEKQWQA-GPIINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRT 604
Query: 76 PAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN 135
P +R ++ + D L L L E GK L + I EV+E +D C + +R+L
Sbjct: 605 PVEERAAILERAADLLEANRAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLF 664
Query: 136 GSVIPSERP----NHMMLETWNPLGVVGVITAFNFPCAV-LGWNACIALVCGNCVVWKGA 190
G+ P N + L GV I+ +NFP A+ LG A AL GN V+ K A
Sbjct: 665 GAPEKLPGPTGESNELRLH---GRGVFVCISPWNFPLAIFLGQVAA-ALAAGNTVIAKPA 720
Query: 191 PTTPLITIAITKLVSEV--------FERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSF 242
TPLI KL+ E LPG GA +G A+ DPRI+ V+F
Sbjct: 721 EQTPLIAAEAVKLLHEAGIPKDVLQL----LPGD-------GATVGAALTADPRIAGVAF 769
Query: 243 TGSTKVGLMVQQTVHQRFGK--CLL-ELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQR 299
TGST+ ++ +T+ R G L+ E G NA+I+ A + V V+ +A +AGQR
Sbjct: 770 TGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQR 829
Query: 300 CTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIK 359
C+ R L + E I V++ L ++K+GDP T +GP+ E++ N + IE +K
Sbjct: 830 CSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMK 889
Query: 360 SQGGKILTGGSVIESE-GNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFE-EAV--K 415
+ + +E G+FV PT EI + ++ E+F P+L+V++++ + + V
Sbjct: 890 REARLLAQLPLPAGTENGHFVAPTAFEI-DSISQLEREVFGPILHVIRYKASDLDKVIDA 948
Query: 416 INNS 419
IN +
Sbjct: 949 INAT 952
|
Length = 1038 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 192 bits (490), Expect = 6e-55
Identities = 128/466 (27%), Positives = 204/466 (43%), Gaps = 37/466 (7%)
Query: 33 GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALR 92
GPT P + +ATV ++ D E A + W P +R V+ + D +
Sbjct: 31 GPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVL 90
Query: 93 EKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF----AVGLSRQLNGSVIPSERPNHMM 148
E L L+ +E GK EV +V + A L P R +
Sbjct: 91 ENREELLDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLA-------PRRRAGALP 143
Query: 149 L-----ETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKL 203
+ E P GVVGVI+ +N+P + +A AL+ GN VV K TPL +A
Sbjct: 144 VLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALA---- 199
Query: 204 VSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK 262
E+ LP ++ G G +G A+ + FTGST G ++ + +R
Sbjct: 200 AVELLYEAGLPRDLWQVVTGPGPVVGTALV--DNADYLMFTGSTATGRVLAEQAGRRLIG 257
Query: 263 CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322
LEL G N +I++DDAD+ A + A AGQ C + R+ +HESIY + V
Sbjct: 258 FSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVA 317
Query: 323 VYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN-FVQP 381
+ +++G + +G L + + +++ ++G +L GG G F +P
Sbjct: 318 AVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEP 377
Query: 382 TIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP---ENIF 437
T++ ++P ++ +EE F PV+ V +EAV+ N P GL++S++T I
Sbjct: 378 TVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIA 437
Query: 438 KWLGPHGSDTGIVNVN---IPTNGAEIGGAFGGEKATGGGREAGSD 480
+ G VNVN G+ + GG K +G GR G++
Sbjct: 438 ARI-----RAGTVNVNEGYAAAWGS-VDAPMGGMKDSGLGRRHGAE 477
|
Length = 524 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 190 bits (484), Expect = 9e-55
Identities = 119/452 (26%), Positives = 212/452 (46%), Gaps = 23/452 (5%)
Query: 35 TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREK 94
+ P N + TV +AS++D A + A+ L +R ++ + L +
Sbjct: 18 VIEVRYPYNGTVVGTVPKASVDDVRR---AFAIAAAYRPTLTRYERSAILDRAAALLAAR 74
Query: 95 LHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI-----PSERPNHMML 149
+ L+++E G + + EV V D+ FA + + +G + P + +
Sbjct: 75 KEEISDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFT 134
Query: 150 ETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFE 209
+ LGV+ IT FN P + A+ N +V K + TPL + + ++ E
Sbjct: 135 QREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEA-- 192
Query: 210 RNKLPGAIFTSFCGG-AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS 268
LP + G EI + +P + LV+FTG +G + R + +LEL
Sbjct: 193 --GLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAGYR--RQVLELG 248
Query: 269 GNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328
GN+ +I+M+DAD+ A + + +GQRCT +R+L+ ES+ + LV+ + +
Sbjct: 249 GNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWR 308
Query: 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-IS 387
GDP++ +G + + FE + +QG ++L G +G PT+++ +
Sbjct: 309 YGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNV---RDGALYAPTVLDRVD 365
Query: 388 PTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDT 447
P+ +V+EE F PV V++F ++A++I+NS GLSS + T + I +++
Sbjct: 366 PSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIA--ELQV 423
Query: 448 GIVNV-NIPTNGAEIGGAFGGEKATGGGREAG 478
G VNV +P E+ FGG K +G G + G
Sbjct: 424 GTVNVWEVPGYRLEL-TPFGGIKDSGLGYKEG 454
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 188 bits (478), Expect = 6e-54
Identities = 120/441 (27%), Positives = 214/441 (48%), Gaps = 11/441 (2%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97
S+NP ++++ + A +D E ++ + + W E R + +R IG ALR +
Sbjct: 11 SVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEE 70
Query: 98 LGRLLSIEMGKILPEGIGEVQEVIDMCD-FAVGLSRQLNGSVIPSERPNHMMLETWNPLG 156
+ ++++ EMGK + + EV + ++CD +A L P+ N + + PLG
Sbjct: 71 MAQMITREMGKPINQARAEVAKSANLCDWYAEHGPAMLKAE--PTLVENQQAVIEYRPLG 128
Query: 157 VVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGA 216
+ I +NFP + A L+ GN + K AP + +L+++VF+ +P
Sbjct: 129 TILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNV----MGCAQLIAQVFKDAGIPQG 184
Query: 217 IFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIM 276
++ + + D RI+ V+ TGS + G + KC+LEL G++ I++
Sbjct: 185 VYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVL 244
Query: 277 DDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336
+DAD++LAV++ + GQ C +R +I E I ++ V +K+GDP ++
Sbjct: 245 NDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEE 304
Query: 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKE 395
LGP+ + R +E ++G ++L GG I GN+ PT++ ++P +E
Sbjct: 305 NALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFRE 364
Query: 396 ELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIP 455
ELF PV + + E A+++ N GLS++IFT + E + + G+
Sbjct: 365 ELFGPVAAITVAKDAEHALELANDSEFGLSATIFT-TDETQARQMAARLECGGVFINGYC 423
Query: 456 TNGAEIGGAFGGEKATGGGRE 476
+ A + AFGG K +G GRE
Sbjct: 424 ASDARV--AFGGVKKSGFGRE 442
|
Length = 462 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 179 bits (457), Expect = 5e-51
Identities = 117/460 (25%), Positives = 202/460 (43%), Gaps = 42/460 (9%)
Query: 36 VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95
+++INP + + T + ++ + + + + +R D L +
Sbjct: 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEA 62
Query: 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDF-----------------AVGLSRQLNGSV 138
+ L+++EMGK L E + + AVG SR
Sbjct: 63 DQVAALMTLEMGKTLASAKAEALKCAKGFRYYAEHAEALLADEPADAAAVGASR------ 116
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ PLGVV + +NFP + A AL+ GN + K A P +
Sbjct: 117 ---------AYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTAL 167
Query: 199 AITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
+ +++F R P F + G+ +AI +DPR++ + TGS G V
Sbjct: 168 YL----ADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD 223
Query: 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318
K +LEL G++ I+M AD+ A + + A V GQ C +R ++H +Y +
Sbjct: 224 EIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAE 283
Query: 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNF 378
+ V +++GDP + T +GPL T + R EK +++ + G IL GG + G F
Sbjct: 284 KFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWF 343
Query: 379 VQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIF 437
PT++ +I+P + EE+F PV + + +EA++I N+ GL S+ +TR
Sbjct: 344 YPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQE 403
Query: 438 KWLGPHGSDTGIVNVN-IPTNGAEIGGAFGGEKATGGGRE 476
+++ + G V +N + + E+ FGG K +G GRE
Sbjct: 404 RFI--DDLEAGQVFINGMTVSYPELP--FGGVKRSGYGRE 439
|
Length = 457 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 7e-51
Identities = 133/500 (26%), Positives = 215/500 (43%), Gaps = 70/500 (14%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-IWMELPAPKRGE 82
F+NG + G T ++INPV+ + IA V EA + + + A A K W ++ +R +
Sbjct: 4 FINGAFVESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERAD 63
Query: 83 VVRQIGDALREKLHHL--------GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQL 134
++ + D + + G+ S+ +P G + D + +
Sbjct: 64 LLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFAD-------VVKNA 116
Query: 135 NGSVIPSERPN---HMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191
P+ + PLGVVGVI+ +N P ++ W AL CGN VV K +
Sbjct: 117 PTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSE 176
Query: 192 TTPLITIAITKLVSEVFERNKLPGAIFT---SFCGGAEIGQAIAKDPRISLVSFTGSTKV 248
TP L+ EV +P ++ F G G+ + + P + ++FTG T+
Sbjct: 177 ETP----GTATLLGEVMNAVGVPKGVYNVVHGF-GPDSAGEFLTRHPGVDAITFTGETRT 231
Query: 249 GLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLI 308
G + + EL G NA I+ D D AV +L +A GQ C R+ +
Sbjct: 232 GSAIMKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYV 291
Query: 309 HESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKN----FEKGIENIKSQGGK 364
I+ + L + +KIG P + T +GPL + E R + +E +G
Sbjct: 292 ERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVE----EGAT 347
Query: 365 ILTGGSVIE-----SEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINN 418
++TGG V + + G +VQPTI + +A +V EE+F P ++ F + EE + + N
Sbjct: 348 VVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALAN 407
Query: 419 SVPQGLSSSIFT-------RSPENIFKWLGPHGSDTGIVNVN------IPTNGAEIGGAF 465
P GL++S++T R + + GIV VN + T F
Sbjct: 408 DTPYGLAASVWTEDLSRAHRVARQM---------EVGIVWVNSWFLRDLRT-------PF 451
Query: 466 GGEKATGGGREAGSDSWKQY 485
GG K +G GRE G S + Y
Sbjct: 452 GGSKLSGIGREGGVHSLEFY 471
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 2e-47
Identities = 139/473 (29%), Positives = 224/473 (47%), Gaps = 55/473 (11%)
Query: 31 AHGPTVSSINPVNNQKI-ATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGD 89
A G INP + + I V EA+ + E+ +++ A+ IW P +R ++ + D
Sbjct: 656 AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAAD 715
Query: 90 ALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMML 149
+ ++ L LL E GK I EV+E +D + G R + N
Sbjct: 716 LMEAQMQTLMGLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRD--------DFDN---- 763
Query: 150 ETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSE--- 206
+T PLG V I+ +NFP A+ AL GN V+ K A TPLI +++ E
Sbjct: 764 DTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGV 823
Query: 207 ---VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF--- 260
V + LPG G +G A+ D R+ V FTGST+V ++Q+ + R
Sbjct: 824 PAGVVQL--LPGR-------GETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQ 874
Query: 261 GKC---LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
G+ + E G NA+I+ A + V VL +A +AGQRC+ R L + + + L
Sbjct: 875 GRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTL 934
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILT---GGSVIES 374
L + ++G+P T +GP+ E++ N E+ I+ ++++G + S
Sbjct: 935 KMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQ 994
Query: 375 EGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFE-EAV--KINNSVPQGLSSSIFTR 431
G FV PT++E+ ++ K E+F PVL+V+++ + + + +IN S GL+ + TR
Sbjct: 995 SGTFVPPTLIELDSFDEL-KREVFGPVLHVVRYNRNQLDELIEQINAS-GYGLTLGVHTR 1052
Query: 432 SPENIFKWLGPHGSDTGIVNV-NIPTN----GAEIG-GAFGGEKATGGGREAG 478
E I + TG +V N+ N GA +G FGGE +G G +AG
Sbjct: 1053 IDETIAQV-------TGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAG 1098
|
Length = 1318 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 170 bits (433), Expect = 7e-47
Identities = 130/485 (26%), Positives = 222/485 (45%), Gaps = 44/485 (9%)
Query: 23 CFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+ GK G T + P + +AT A E+ ++A EA K W +P R
Sbjct: 35 LVIGGKEVRTGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRA 94
Query: 82 EVVRQIGDALREKLHHLGRLLSIEM---GKILPEG-IGEVQEVIDMCDFAVGLSRQLNGS 137
+ + D L K + L + M GK + + I E+ID F V + +L
Sbjct: 95 AIFLKAADLLSGKYRY--ELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYA- 151
Query: 138 VIPSERPNHMMLETWN-----PL-GVVGVITAFNFPCAVLGWN--ACIALVCGNCVVWKG 189
++P WN PL G V ++ FNF +G N AL+ GN V+WK
Sbjct: 152 ----QQPLSSPAGVWNRLEYRPLEGFVYAVSPFNF--TAIGGNLAGAPALM-GNVVLWKP 204
Query: 190 APTTPLITIAITKLVSEVFERNKLP-GAIFTSF--CGGAEIGQAIAKDPRISLVSFTGST 246
+ T + LV ++ E LP G I +F G +G + P ++ + FTGST
Sbjct: 205 SDTA----VLSNYLVYKILEEAGLPPGVI--NFVPGDGPVVGDTVLASPHLAGLHFTGST 258
Query: 247 KVGLMVQQTVHQR------FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
+ + + + + + + E G N ++ AD+ V + + A GQ+C
Sbjct: 259 PTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKC 318
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
+ R + ES++ V ++L++ K++K+GDP + +G + ++ + I++ KS
Sbjct: 319 SAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKS 378
Query: 361 QGG-KILTGGSVIESEGNFVQPTIVEIS-PTADIVKEELFAPVL--YVMKFQTFEEAVK- 415
+I+ GG +S G FV+PT++E + P ++ EE+F PVL YV FEE ++
Sbjct: 379 DPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLEL 438
Query: 416 INNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGG-AFGGEKATGGG 474
++ + P L+ +IF + + I + + G +N GA +G FGG +A+G
Sbjct: 439 VDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTN 498
Query: 475 REAGS 479
+AGS
Sbjct: 499 DKAGS 503
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 167 bits (426), Expect = 1e-46
Identities = 113/436 (25%), Positives = 194/436 (44%), Gaps = 18/436 (4%)
Query: 48 ATVVEASLEDYEEGMKACSEASKIWME----LPAPKRGEVVRQIGDALREKLHHLGRLLS 103
+ E D+ KA A ++++ LPA +R ++ ++ D + E+ L L++
Sbjct: 10 KPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIA 69
Query: 104 IEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP----SERPNHMMLETWNPLGVVG 159
E GK L + EV ID + A QL G IP + T P+GVV
Sbjct: 70 REGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVV 129
Query: 160 VITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFT 219
I+AFN P ++ A+ G V+ K A TPL +A L+ E LP
Sbjct: 130 AISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEA----GLPEGWCQ 185
Query: 220 SFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDA 279
+ + + + DPR++ SF GS +VG M++ + +C LE G +I+ A
Sbjct: 186 AVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPG-TRCALEHGGAAPVIVDRSA 244
Query: 280 DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLL 339
D+ + ++ AGQ C + +R+ + I +L +++ +GDP + T +
Sbjct: 245 DLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEV 304
Query: 340 GPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELF 398
GPL P E+ + + G ++L GG + S+ + PT++ + A + +E+F
Sbjct: 305 GPLIRPREVDRVEEWVNEAVAAGARLLCGGKRL-SDTTY-APTVLLDPPRDAKVSTQEIF 362
Query: 399 APVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNG 458
PV+ V + +EA+ NS+P +++FT+ + K + D V VN T
Sbjct: 363 GPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAV--RRLDATAVMVNDHTAF 420
Query: 459 AEIGGAFGGEKATGGG 474
F G + +G G
Sbjct: 421 RVDWMPFAGRRQSGYG 436
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 165 bits (420), Expect = 2e-45
Identities = 118/459 (25%), Positives = 209/459 (45%), Gaps = 32/459 (6%)
Query: 40 NPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99
+P Q + +V + ED +E + A A + W + +R +V+R + + E +
Sbjct: 2 DPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEIC 61
Query: 100 RLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLET------W 152
R+ + GK + + +GE+ + + + ++ P RP +++ +
Sbjct: 62 RVACRDTGKTMVDASLGEILVTCEKIRW---TLKHGEKALRPESRPGGLLMFYKRARVEY 118
Query: 153 NPLGVVGVITAFNFPCAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERN 211
PLGVVG I ++N+P L I AL GN +V K + + ++ E
Sbjct: 119 EPLGVVGAIVSWNYPFHNL-LGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAAC 177
Query: 212 KLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271
+ E +A+ P I ++F GS VG V + +LEL G +
Sbjct: 178 GHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKD 237
Query: 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331
I++DDAD+ ++ ++GQ C R+++HE IY +L+ L D + ++ G
Sbjct: 238 PAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGP 297
Query: 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGS----VIESEGNFVQPTI-VEI 386
PL+ +G + +P E+ + + +G ++L GG +G++ PT+ V++
Sbjct: 298 PLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDV 357
Query: 387 SPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSD 446
+P I +EE+F PV+ VMK EEAV+I NS GL +S+F + + + +
Sbjct: 358 TPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIA--SQLE 415
Query: 447 TGIVNVNIPTNGAEIGGA-------FGGEKATGGGREAG 478
TG+V +N + G FGG K +G GR AG
Sbjct: 416 TGMVAIN------DFGVNYYVQQLPFGGVKGSGFGRFAG 448
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 1e-43
Identities = 137/502 (27%), Positives = 224/502 (44%), Gaps = 34/502 (6%)
Query: 11 LSEIGLSPETPGCFVNGK--WKAHGPTVSSINPVNNQ-KIATVVEASLEDYEEGMKACSE 67
L E+ E + G+ W + G + ++P N+Q +A A+ E + ++A +
Sbjct: 22 LKELKGRMEEIPLVIGGEEVWTS-GERIYQVSPHNHQAVLAKATNATEELANKAVEAALD 80
Query: 68 ASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEM---GKILPEG-IGEVQEVIDM 123
A K W LP R + + D L +L+ M K + + I V E+ID
Sbjct: 81 AKKEWSLLPFYDRAAIFLKAADLLSGPYRA--EILAATMLGQSKTVYQAEIDAVAELIDF 138
Query: 124 CDFAVGLSRQLNGSVIPSERPNHMMLETWNPL-GVVGVITAFNFPCAVLGWNACIALVCG 182
F +R+L P P + PL G V I+ FNF A+ G A + G
Sbjct: 139 FRFNAKYARELYEQQ-PISAPGEWNRTEYRPLEGFVYAISPFNF-TAIAGNLAGAPALMG 196
Query: 183 NCVVWKGAPTTPLITIAITKLVSEVFERNKLP-GAIFTSFCGGAEIGQAIAKDPRISLVS 241
N V+WK + T L + +++ E LP G I G + + DP ++ +
Sbjct: 197 NTVIWKPSDTAMLSNYLVMRILEEA----GLPPGVINFVPGDGPLVSDTVLADPDLAGIH 252
Query: 242 FTGSTKVGLMVQQTVHQR------FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295
FTGST + + V Q F + + E G + ++ AD++ V + A
Sbjct: 253 FTGSTPTFKHLWKQVAQNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEY 312
Query: 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355
GQ+C+ C RL + S++ +L+ +VK+GDP + GT +G + +S K I
Sbjct: 313 QGQKCSACSRLYVPHSLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYI 372
Query: 356 ENIKSQGG--KILTGGSVIESEGNFVQPTIVEIS-PTADIVKEELFAPVL--YVMKFQTF 410
E+ KS IL GG +S G FV+PT+VE P ++KEE+F PVL YV +
Sbjct: 373 EHAKSDPSALTILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKY 432
Query: 411 EEAVK-INNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGA-FGGE 468
+E + ++++ GL+ ++F + + I + G +N GA +G FGG
Sbjct: 433 KEILDLVDSTTSYGLTGAVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGA 492
Query: 469 KATGGGREAGSDSWKQYMRRST 490
+A+G +AG + R T
Sbjct: 493 RASGTNDKAG---GPHNLLRWT 511
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 158 bits (400), Expect = 4e-42
Identities = 123/483 (25%), Positives = 219/483 (45%), Gaps = 24/483 (4%)
Query: 16 LSPETP----GCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI 71
+ P P G FV + + + INP + ++ V + E+++ + A +A +
Sbjct: 110 MPPRVPNLIGGSFVESQSSSF---IDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPL 166
Query: 72 WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLS 131
W P R V+ + + +R+ + L ++ E GK L + G++ +++ + A G++
Sbjct: 167 WRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMA 226
Query: 132 RQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191
G +P+ PLGV I FNFP + W +A+ CGN + K +
Sbjct: 227 TLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSE 286
Query: 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLM 251
P ++ + +L E LP + G + AI D I VSF GS G+
Sbjct: 287 KDPGASVILAELAMEA----GLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMH 342
Query: 252 VQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHES 311
+ + + + N +++ DA+I + ++L A G AGQRC ++
Sbjct: 343 IYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD 402
Query: 312 IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV 371
++ D+LV+ K +K+ E LGP+ + ++++ + I++ G K+L G
Sbjct: 403 A-KSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRD 461
Query: 372 I----ESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSS 426
I +GNF+ PTI+ ++P + KEE+F PVL M+ +F+EA+ I N G +
Sbjct: 462 IVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGA 521
Query: 427 SIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGR-----EAGSDS 481
+IFT S K+ + G + +N+P +F G KA+ G +AG D
Sbjct: 522 AIFTSSGAAARKF--QMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDF 579
Query: 482 WKQ 484
+ Q
Sbjct: 580 FTQ 582
|
Length = 604 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 2e-40
Identities = 118/462 (25%), Positives = 201/462 (43%), Gaps = 19/462 (4%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
F+NG++ A T +++PV +A + D + + A W K
Sbjct: 23 FINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAK 82
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSV 138
R V+ ++ D + L L +++ GK + + ++ + ++ G V
Sbjct: 83 RKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEV 142
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ + + + P+GV+ I +NFP + W AL GN V+ K + +PL I
Sbjct: 143 ATTS-SHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAI 201
Query: 199 AITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG-LMVQQTV 256
+ L E LP + G G E GQA+++ I ++FTGST+ G +++
Sbjct: 202 RLAGLAKEA----GLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAG 257
Query: 257 HQRFGKCLLELSGNNAIIIMDDA-DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
+ LE G +A I+ D D++ A + GQ C RLL+ ESI
Sbjct: 258 DSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADE 317
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375
L L + + G PL+ T +G L + I +S+G +L G +
Sbjct: 318 FLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRN--AGL 375
Query: 376 GNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
+ PTI V++ P A + +EE+F PVL V +F + E+A+++ N GL ++++TR
Sbjct: 376 AAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLS 435
Query: 435 NIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGRE 476
+ G V VN N ++ FGG K +G GR+
Sbjct: 436 RAHRM--SRRLKAGSVFVN-NYNDGDMTVPFGGYKQSGNGRD 474
|
Length = 494 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 144 bits (366), Expect = 3e-38
Identities = 78/285 (27%), Positives = 143/285 (50%), Gaps = 16/285 (5%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
PLGVV +I +N+P L I A+ GN VV K + P + + KL+ + F
Sbjct: 100 PLGVVLIIGPWNYP-LQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPKYF---- 154
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
GG E+ A+ +P + FTGS VG +V + + LEL G +
Sbjct: 155 -DPEAVAVVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSP 212
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332
I+ DA++++A R + + AGQ C +L+HESI ++++L K+ G+
Sbjct: 213 CIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEF-YGED 271
Query: 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-ISPTAD 391
++ G + + ++F++ + GK++ GG V + E ++ PTI++ +SP +
Sbjct: 272 PKESPDYGRI---INERHFDRLASLL--DDGKVVIGGQVDKEE-RYIAPTILDDVSPDSP 325
Query: 392 IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENI 436
+++EE+F P+L ++ + +EA++ NS P+ L+ +F+
Sbjct: 326 LMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQ 370
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 2e-37
Identities = 118/443 (26%), Positives = 202/443 (45%), Gaps = 39/443 (8%)
Query: 9 EFLSEIGLSPETPGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
F +EI L + + +G+W+ + G +V+ NP + V + E+ + M++
Sbjct: 5 GFFAEI-LDGDVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAK 63
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
A K W + P KR E++ + L+E + L E+ K + + EV D+ +
Sbjct: 64 AAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISY 123
Query: 127 A-------VGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179
+G + L P N L + PLGVV I FN+P + AL
Sbjct: 124 TAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPAL 183
Query: 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRIS 238
+ GN VV K P T A+ + F P + + G G+EIG + P ++
Sbjct: 184 IAGNAVVLK--PPTQGAVAAL--HMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVN 239
Query: 239 LVSFTG-------STKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFA 291
+SFTG S K G++ Q +EL G +A I+++DAD+ LA +++
Sbjct: 240 CISFTGGDTGIAISKKAGMVPLQ----------MELGGKDACIVLEDADLDLAAANIIKG 289
Query: 292 AVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351
+GQRCT + +L+ ES+ +++++ ++ +G P E + P+ + ES NF
Sbjct: 290 GFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP-EDDCDITPVVS-ESSANF 347
Query: 352 EKG-IENIKSQGGKILTGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQT 409
+G + + K +G + EGN + P +++ + P I EE F PVL V++ +
Sbjct: 348 IEGLVMDAKEKGATFCQE---WKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS 404
Query: 410 FEEAVKINNSVPQGLSSSIFTRS 432
EE + N+ GL +FTR
Sbjct: 405 VEEGIHHCNASNFGLQGCVFTRD 427
|
Length = 496 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 142 bits (359), Expect = 7e-37
Identities = 84/305 (27%), Positives = 142/305 (46%), Gaps = 22/305 (7%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
PLGVV VI A+N+P L A+ GN VV K + +P + + KL++
Sbjct: 109 PLGVVLVIGAWNYP-LNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLT-----KY 162
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
L + GG E+ + K+P + FTGS +VG +V Q + C LEL G +
Sbjct: 163 LDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSP 221
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI--- 329
+I+ ++K+A R + + AGQ C +L+H SI D+ ++ K+
Sbjct: 222 VIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSI----KDKFIEALKEAIKEFF 277
Query: 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPT-IVEISP 388
G+ +K + ++ E IK GGK++ GG V +V PT IV
Sbjct: 278 GEDPKKSEDYSRIVNEFH---TKRLAELIKDHGGKVVYGGEVDIEN-KYVAPTIIVNPDL 333
Query: 389 TADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTG 448
+ +++EE+F P+L ++ ++ +E ++ NS P+ L+ F + L + +G
Sbjct: 334 DSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVL--ENTSSG 391
Query: 449 IVNVN 453
V +N
Sbjct: 392 AVVIN 396
|
Length = 493 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 138 bits (351), Expect = 3e-36
Identities = 89/343 (25%), Positives = 151/343 (44%), Gaps = 33/343 (9%)
Query: 154 PLGVVGVITAFNFP-----CAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208
PLGVV +I +N+P ++G A+ G VV K + TP L++E+
Sbjct: 108 PLGVVLIIGPWNYPVLLALSPLVG-----AIAAGCTVVLKPSELTP----HTAALLAELV 158
Query: 209 ERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS 268
+ P A G E + + + + +TGS +VG ++ + + LEL
Sbjct: 159 PKYLDPDAFQVVQGGVPETTALLEQ--KFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELG 216
Query: 269 GNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328
G + +I+ +AD++LA + +L+ G AGQ C +L+ S+Y +++L V +
Sbjct: 217 GKSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFY 276
Query: 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISP 388
G + P ++F + + + GK++ GG + E+ F+ PTIV
Sbjct: 277 PGGANAS-PDYTRIVNP---RHFNRLKSLLDTTKGKVVIGGEMDEAT-RFIPPTIVSDVS 331
Query: 389 TAD-IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDT 447
D ++ EELF PVL ++K +EA+K+ NS L+ IFT I L S
Sbjct: 332 WDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGG 391
Query: 448 GIVN-----VNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQY 485
++N V + FGG +G G G + +
Sbjct: 392 VVINDTLIHVGVDN------APFGGVGDSGYGAYHGKYGFDTF 428
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 1e-32
Identities = 96/361 (26%), Positives = 166/361 (45%), Gaps = 55/361 (15%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACI-----ALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208
P GVV +I +N+P + + A+ GN V K + TP + I K++ E F
Sbjct: 100 PYGVVLIIAPWNYP-----FQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEETF 154
Query: 209 ERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS 268
+ + GG E Q + + FTGS +VG +V + + LEL
Sbjct: 155 DEEYV-----AVVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELG 208
Query: 269 GNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328
G + I+ +DA++KLA + +++ AGQ C +L+HES+ + + +L + K+
Sbjct: 209 GKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFY 268
Query: 329 IGDPLEKGTLLGPLHTPESR----KNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV 384
DPLE R K+F++ + GKI+ GG+ + E +++PTI+
Sbjct: 269 GEDPLESPDY--------GRIINEKHFDRLAGLLD--NGKIVFGGN-TDRETLYIEPTIL 317
Query: 385 -EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLG-- 441
++ +++EE+F P+L V+ + T +EA++I S P+ L+ +F+ + K L
Sbjct: 318 DNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENL 377
Query: 442 PHGS----DT--GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW------KQYMRRS 489
G DT + N +P FGG +G G G S+ K +++S
Sbjct: 378 SFGGGCINDTIMHLANPYLP---------FGGVGNSGMGSYHGKYSFDTFSHKKSILKKS 428
Query: 490 T 490
T
Sbjct: 429 T 429
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 121 bits (307), Expect = 3e-30
Identities = 91/345 (26%), Positives = 164/345 (47%), Gaps = 46/345 (13%)
Query: 154 PLGVVGVITAFNFP-CAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
P GV +I+ +N+P G A+ GN + K + TP + I K++ E F+ ++
Sbjct: 100 PKGVCLIISPWNYPFNLAFGPLVS-AIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDE 158
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
+ A+F G AE+ QA+ + P + FTGS VG +V + LEL G +
Sbjct: 159 V--AVFE---GDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSP 212
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332
I+ + AD+K A + + + AGQ C + +HES V D V+ K
Sbjct: 213 TIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHES----VKDAFVEHLKAE----- 263
Query: 333 LEK--GTLLGPLHTPE-----SRKNFE--KG-IENIKSQGGKILTGGSVIESEGNFVQPT 382
+EK G +P+ + ++F+ KG +++ ++G K+ GG ++ ++ PT
Sbjct: 264 IEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQF-DAAQRYIAPT 322
Query: 383 IVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLG 441
++ ++P I++EE+F PVL ++ ++ +E ++ N+ P+ L+ +F++ N+ K L
Sbjct: 323 VLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLA 382
Query: 442 PHGS-DTGI-------VNVNIPTNGAEIGGAFGGEKATGGGREAG 478
S + +N N+P FGG +G G G
Sbjct: 383 RTSSGGVVVNDVVLHFLNPNLP---------FGGVNNSGIGSYHG 418
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 3e-29
Identities = 93/446 (20%), Positives = 163/446 (36%), Gaps = 34/446 (7%)
Query: 64 ACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL--GRLLSIEMGKILPEGIGEVQEVI 121
A ++K L PKR + + +I L K + + G +L G + E I Q +
Sbjct: 7 AADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFAENICGDQVQL 66
Query: 122 DMCDFAVGLSRQLNGSV--IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179
F + R + + W P G V VI AFNFP + AL
Sbjct: 67 RARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRW-PYGPVLVIGAFNFPLWIPLLQLAGAL 125
Query: 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISL 239
GN V+ K ++ + +L+ LP T G + QA+ P +
Sbjct: 126 AMGNPVIVKPHTAVSIVMQIMVRLLHYAG---LLPPEDVTLINGDGKTMQALLLHPNPKM 182
Query: 240 VSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDAD-IKLAVRSVLFAAVGTAGQ 298
V FTGS++V + + + + LEL+G N ++ DA + + +GQ
Sbjct: 183 VLFTGSSRVAEKL--ALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQ 240
Query: 299 RCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENI 358
+CT L + E+ + +++K L + L L P I ++
Sbjct: 241 KCTAQSMLFVPEN------WSKTPLVEKLK--ALLARRKLEDLLLGPVQTFTTLAMIAHM 292
Query: 359 KSQGGKILTGGSVIE---SEGNFVQP--------TIVEISPTADIVKEELFAPVLYVMKF 407
++ G +L S + I EI T ++V EE+F P V+++
Sbjct: 293 ENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEY 352
Query: 408 QTFEEAVKINNSV-PQG-LSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAF 465
+ + A+ + G L+++I++ P + + +G + G
Sbjct: 353 KKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAPNQNH 412
Query: 466 GGEKATGGGREA--GSDSWKQYMRRS 489
GG A G ++ K R
Sbjct: 413 GGGPAADPRGAGIGGPEAIKLVWRCH 438
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 3e-27
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 379 VQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
+ +V++ P I +EE+F PVL V++F+ EEA+ + N GL++ +FTR +
Sbjct: 255 LVTVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALR 314
Query: 439 WLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493
G V +N + G FGG K +G GRE G ++Y R T I
Sbjct: 315 VAE--RLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVVI 367
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 5e-25
Identities = 98/355 (27%), Positives = 150/355 (42%), Gaps = 25/355 (7%)
Query: 154 PLGVVGV-ITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
P G V V I AFNFP L A + G + K A T + A+ + + E
Sbjct: 143 PKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTM---VESGL 199
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG--LMVQQTVHQRFGKCLLELSGN 270
LP CG A G + +V+FTGS L V +R + E
Sbjct: 200 LPEGSLQLICGSA--GDLLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSL 257
Query: 271 NAIIIMDDA-----DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYK 325
NA I+ +DA + L + ++ AGQ+CT RR+++ +++ + VL L
Sbjct: 258 NAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLA 317
Query: 326 QVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE 385
+V +GDP E+G +GPL + E R + E + + + G ++ GG +G F PT++
Sbjct: 318 KVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRL-DGAFFPPTLLL 376
Query: 386 I-SPTADIVKE-ELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKW---L 440
P A V E F PV + EA ++ L +++ T PE ++ L
Sbjct: 377 AEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGL 436
Query: 441 GPHGSDTGIVNVNIPTNGAEIGGAF-----GGEKATGGGREAGS-DSWKQYMRRS 489
P+ I+N + G GG GGG E G S K YM+R+
Sbjct: 437 APYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRT 491
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 106 bits (268), Expect = 7e-25
Identities = 75/311 (24%), Positives = 133/311 (42%), Gaps = 61/311 (19%)
Query: 154 PLGVVGVITAFNFPC--AVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERN 211
PLGVVG+I +N+P A+ AL GN V+ K + TP + + +L++E F+ +
Sbjct: 101 PLGVVGIIVPWNYPLYLALGP--LIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDED 158
Query: 212 KLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ---------TVHQRFGK 262
++ A+ T GGA++ A + P L+ FTGST VG V + T
Sbjct: 159 EV--AVVT---GGADVAAAFSSLPFDHLL-FTGSTAVGRHVMRAAAENLTPVT------- 205
Query: 263 CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322
LEL G + II DAD+ A + F + AGQ C +L+ E + +
Sbjct: 206 --LELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKA 263
Query: 323 VYKQVKIGDPLEKGTLLGPLHTPESRKN-----------FE--KG-IENIKSQGGKI--L 366
+ P N + +G +E+ +++G ++ L
Sbjct: 264 AVAK----------------MYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVIEL 307
Query: 367 TGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
+ + PT+V ++ +++EE+F P+L ++ + + +EA+ N+ P+ L+
Sbjct: 308 NPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLA 367
Query: 426 SSIFTRSPENI 436
F
Sbjct: 368 LYYFGEDKAEQ 378
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 5e-24
Identities = 96/371 (25%), Positives = 147/371 (39%), Gaps = 45/371 (12%)
Query: 152 WNPLGVVGV-ITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFER 210
P V V I AFNFP + AL+ G V+ K A T +T A +V ++ E
Sbjct: 141 LTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEA---VVKDIVES 197
Query: 211 NKLPGAIFTSFCGGAEIGQAIAK-DPRISLVSFTGSTKVGLMVQQTVHQ-------RFGK 262
LP CG G + + +V+FTGS ++ H RF
Sbjct: 198 GLLPEGALQLICGSV--GDLLDHLGEQ-DVVAFTGSAATAAKLR--AHPNIVARSIRFN- 251
Query: 263 CLLELSGNNAIIIMDDA-----DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
E NA I+ DA + L V+ V AGQ+CT RR + E+ V+
Sbjct: 252 --AEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVI 309
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG-------S 370
+ L +V +GDP +G +GPL + E R++ + + +++ GG
Sbjct: 310 EALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATL-LAEAEVVFGGPDRFEVVG 368
Query: 371 VIESEGNFVQPTIVEISP--TADIVKE-ELFAPVLYVMKFQTFEEAVKINNSVPQGLSSS 427
+G F PT++ A V + E F PV +M + + EA+++ L +S
Sbjct: 369 ADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVAS 428
Query: 428 IFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGG--------AFGGEKATGGGRE-AG 478
+ T P + + G + V + E G GG GGG E G
Sbjct: 429 VVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEELGG 488
Query: 479 SDSWKQYMRRS 489
K YM+R+
Sbjct: 489 LRGVKHYMQRT 499
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 1e-23
Identities = 94/373 (25%), Positives = 165/373 (44%), Gaps = 64/373 (17%)
Query: 152 WNPLGVVGVITAFNFPCAVL-----GWNACIALVCGNCVVWKGAPTTPLITIAITKLVSE 206
PLGVV +I A+N+P + G A+ GNCVV K + +P A KL++E
Sbjct: 98 KEPLGVVLIIGAWNYPLQLTLVPLVG-----AIAAGNCVVIKPSEVSP----ATAKLLAE 148
Query: 207 VFERNKLPGAI----FTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK 262
+ +P + + GG E + K R + +TGST VG +V Q +
Sbjct: 149 L-----IPKYLDKECYPVVLGGVEETTELLKQ-RFDYIFYTGSTSVGKIVMQAAAKHLTP 202
Query: 263 CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322
LEL G + + DI +A R + + AGQ C +L V ++ V+
Sbjct: 203 VTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPE----VQEKFVE 258
Query: 323 VYKQVKIGDPLEK--GTLLGPLHTPE-----SRKNFEKGIENIKSQGGKILTGGSVIESE 375
K+ L++ G P +P+ + ++F++ + + GGK+ GG E E
Sbjct: 259 ALKKT-----LKEFYGE--DPKESPDYGRIINDRHFQRLKKLLS--GGKVAIGGQTDEKE 309
Query: 376 GNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
++ PT+ ++ P+ +++EE+F P+L ++ +EA++ NS + L+ +F+ + +
Sbjct: 310 -RYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKK 368
Query: 435 NIFKWLGPHGSDTGIVN--------VNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
I K L S VN ++P FGG +G G G S+ +
Sbjct: 369 VINKILSNTSSGGVCVNDTIMHYTLDSLP---------FGGVGNSGMGAYHGKYSFDTFS 419
Query: 487 RRSTCTI-NYGNE 498
+ +C + + E
Sbjct: 420 HKRSCLVKSLNME 432
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 97.5 bits (243), Expect = 9e-22
Identities = 85/294 (28%), Positives = 141/294 (47%), Gaps = 33/294 (11%)
Query: 154 PLGVVGVITAFNFPCA-----VLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208
PLGVV VI+A+NFP V+G A+ GN VV K + P + + KL+ E
Sbjct: 101 PLGVVLVISAWNFPFLLSLEPVIG-----AIAAGNAVVLKPSELAPATSALLAKLIPEYL 155
Query: 209 ERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS 268
+ AI GG A+ + + + FTGS +VG ++ + LEL
Sbjct: 156 D----TKAI-KVIEGGVPETTALL-EQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELG 209
Query: 269 GNNAIIIMDDADIKLAVRSVLFAAVGT-AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQV 327
G +I+ D+K+AVR + G GQ C +L+ ES T++D L + ++
Sbjct: 210 GKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKF 269
Query: 328 KIGDPLEKGTLLGPLHTPESR---KNFEKGIENI---KSQGGKILTGGSVIESEGNFVQP 381
+P E L SR + + + + S KI+ GG E + +++P
Sbjct: 270 FGENPKESKDL--------SRIVNSHHFQRLSRLLDDPSVADKIVHGGERDE-KNLYIEP 320
Query: 382 TIVEISP-TADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
TI+ P + I+ EE+F P+L ++ + EE+++I NS P+ L++ +FT++ E
Sbjct: 321 TILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKE 374
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 94.1 bits (235), Expect = 1e-20
Identities = 78/297 (26%), Positives = 122/297 (41%), Gaps = 41/297 (13%)
Query: 154 PLGVVGVITAFNFPCA--VLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERN 211
PLG V V A NFP A V G + AL G VV K P P + + + +
Sbjct: 105 PLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRAT 164
Query: 212 KLPGAIFTS-FCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKCL 264
LP +F+ GG E+G A+ K P I V FTGS + G + R +
Sbjct: 165 GLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYA--- 221
Query: 265 LELSGNNAIIIMDDADIKLAVRSVLFAA--VGT----AGQRCTTCRRLLIHESIYQTVLD 318
EL N + I+ A LA R A VG+ AGQ CT +L+ D
Sbjct: 222 -ELGSVNPVFILPGA---LAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAG---PAGD 274
Query: 319 QLVDVYKQVKIGDPLEK---GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375
+ + + L T+L TP + + +G+E + + G + G
Sbjct: 275 AFIA-----ALAEALAAAPAQTML----TPGIAEAYRQGVEALAAAPGVRVLAGGAAAEG 325
Query: 376 GNFVQPTIVEISPTA----DIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
GN PT+ ++ A ++EE+F P V+++ E + + ++ L+++I
Sbjct: 326 GNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATI 382
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 3e-19
Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 22/291 (7%)
Query: 156 GVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215
GV I AFNFP L A AL+ G V+ K A T +T ++V +V LP
Sbjct: 150 GVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLT---QRMVKDVVAAGILPA 206
Query: 216 AIFTSFCGGAEIGQAIAKDPRISLVSFTGS--TKVGLMVQQTVHQRFGKCLLELSGNNAI 273
+ CG + + +VSFTGS T L V QR + +E N+
Sbjct: 207 GALSVVCGSS--AGLLDHLQPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSA 264
Query: 274 IIMDDAD-----IKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328
++ DA L V+ V+ +GQ+CT RR+ + E++Y V + L +
Sbjct: 265 LLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTT 324
Query: 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE------SEGNFVQPT 382
+G+P G +GPL + G+ +++Q ++L G + V PT
Sbjct: 325 VGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQ-AEVLFDGGGFALVDADPAVAACVGPT 383
Query: 383 IVEISP--TADIVKE-ELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
++ S A V + E+F PV ++ ++ A+ + L +S+++
Sbjct: 384 LLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYS 434
|
Length = 521 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 82.0 bits (202), Expect = 1e-16
Identities = 84/341 (24%), Positives = 155/341 (45%), Gaps = 20/341 (5%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
PLGVV VI+A+N+P +L + I A+ GN VV K + P + + KL+ + +
Sbjct: 112 PLGVVLVISAWNYP-FLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLD--- 167
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
A+ GA + + + +TGS+K+G ++ + +LEL G +
Sbjct: 168 -SSAV--RVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSP 224
Query: 273 IIIMDDADIKLAVRSVLFAAVG-TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331
+++ D D+K+ VR ++ G GQ C + +L + V+D + + +
Sbjct: 225 VVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKN 284
Query: 332 PLEK---GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTI-VEIS 387
P+E ++ H K ++ K KI+ GG + E + PTI +++
Sbjct: 285 PMESKDMSRIVNSTHFDRLSKLLDE-----KEVSDKIVYGGEK-DRENLKIAPTILLDVP 338
Query: 388 PTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDT 447
+ I+ EE+F P+L ++ EE+ + S P+ L++ +FT + + + + S
Sbjct: 339 LDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHN-KKLKERFAATVSAG 397
Query: 448 GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRR 488
GIV +I + A FGG +G G G S+ + +
Sbjct: 398 GIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHK 438
|
Length = 484 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 1e-16
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 20/286 (6%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
PLGVV + +++NFP L I A+ GN VV K + P A + ++ +
Sbjct: 108 PLGVVLIFSSWNFPIG-LSLEPLIGAIAAGNAVVLKPSELAP----ATSAFLAANIPKYL 162
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
A+ GG +G+ + + + FTGS +VG ++ + LEL G
Sbjct: 163 DSKAV-KVIEGGPAVGEQLL-QHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCP 220
Query: 273 II---IMDDADIKLAVRSVLFAAVGT-AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328
I + D K+AV ++ G+ AGQ C +L+ E +++ L K+
Sbjct: 221 CIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFF 280
Query: 329 IGDPLEKGTLLGPLHTPESRKNFE--KGIENIKSQGGKILTGGSVIESEGNFVQPTIVEI 386
+P E ++ L ++K+F+ + I+ GGS+ E + F++PTI+
Sbjct: 281 GENPRESKSMARIL----NKKHFQRLSNLLKDPRVAASIVHGGSIDE-KKLFIEPTILLN 335
Query: 387 SP-TADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
P +DI+ EE+F P+L ++ + E+++ NS P+ L+ FT
Sbjct: 336 PPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTN 381
|
Length = 484 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 2e-15
Identities = 83/312 (26%), Positives = 132/312 (42%), Gaps = 46/312 (14%)
Query: 154 PLGVVGV-ITAFNFPCAVLGWN-----ACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207
PL V V I AFNFP W A A + G + K A T +T A +V +
Sbjct: 147 PLEGVAVHINAFNFPV----WGMLEKLAP-AFLAGVPAIVKPATATAYLTEA---VVRLI 198
Query: 208 FERNKLP-GAIFTSFCGGAE--IGQAIAKDPRISLVSFTGSTKVGLMVQQTVH-----QR 259
E LP GA+ CG A + +D +V+FTGS ++ +
Sbjct: 199 VESGLLPEGAL-QLICGSAGDLLDHLDGQD----VVTFTGSAATAQKLRAHPNVVANSVP 253
Query: 260 FGKCLLELSGNNAIIIMDDA-----DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
F E NA I+ DA + L V+ V+ AGQ+CT RR ++ ++
Sbjct: 254 FT---AEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVD 310
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG----- 369
V++ L +V +GDP +G +G L + E R++ + + + +I+ GG
Sbjct: 311 AVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAAL-LAAAEIVFGGPDSFE 369
Query: 370 --SVIESEGNFVQPTIV--EISPTADIVKE-ELFAPVLYVMKFQTFEEAVKINNSVPQGL 424
+G F PT++ + A V + E F PV +M + +EA+++ L
Sbjct: 370 VVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSL 429
Query: 425 SSSIFTRSPENI 436
+S+ T PE
Sbjct: 430 VASLVTADPEVA 441
|
Length = 675 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 5e-13
Identities = 69/314 (21%), Positives = 130/314 (41%), Gaps = 45/314 (14%)
Query: 154 PLGVVGVITAFNFPCAVLGWNA----CIALVCGNCVVWKGAPTTPLITIAIT-KLVSEV- 207
P GV VI FP WN +L GN V+ K P L +AIT ++ EV
Sbjct: 193 PRGVALVIGCSTFPT----WNGYPGLFASLATGNPVIVKPHPAAIL-PLAITVQVAREVL 247
Query: 208 ----FERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263
F+ N + A T I Q +A P + ++ FTGS G ++ Q +
Sbjct: 248 AEAGFDPNLVTLAADTP---EEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQ--AQV 302
Query: 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323
E +G N +++ D+K +R++ F+ +GQ CTT + + + QT D
Sbjct: 303 YTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQT--DDGRKS 360
Query: 324 YKQVK----------IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
+ +V + DP LLG + +P++ + Q G++L +
Sbjct: 361 FDEVAADLAAAIDGLLADPARAAALLGAIQSPDTLARIAEA-----RQLGEVLLASEAVA 415
Query: 374 S---EGNFVQ-PTIVEI-SPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ---GLS 425
V+ P ++++ + EE F P+ +V+ + + ++++ + ++
Sbjct: 416 HPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMT 475
Query: 426 SSIFTRSPENIFKW 439
+++ PE + +
Sbjct: 476 VGVYSTDPEVVERV 489
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 7e-13
Identities = 79/309 (25%), Positives = 135/309 (43%), Gaps = 45/309 (14%)
Query: 154 PLGVVGVITAFNFPCAVLGWNA----CIALVCGNCVVWKGAPTTPLITIAIT-KLVSEV- 207
P G+ VI FP WN +L GN V+ K P ++ +A+T ++ EV
Sbjct: 193 PRGIALVIGCSTFPT----WNTYPGLFASLATGNPVLVKPHPGA-ILPLALTVQVAREVL 247
Query: 208 ----FERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263
F+ N + A F G E Q +A DP + ++ FTGS G ++Q + R +
Sbjct: 248 GEAGFDPNLVTLAAFDP---GHEAAQRLATDPAVRIIDFTGSNAFGQWLEQ--NARQAQV 302
Query: 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323
E +G N +II D K +R++ F+ +GQ CTT + +L+ +T DQ
Sbjct: 303 YTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRT--DQGRKS 360
Query: 324 YKQVK----------IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
Y +V +GDP +LG + +P++ + G++L + IE
Sbjct: 361 YDEVAADLATAIDGLLGDPARATAVLGAIQSPDTLARIAEA-----RALGEVLLASTKIE 415
Query: 374 S---EGNFVQ-PTIVEI-SPTADIVKEELFAPVLYVMKFQTFEEAVKI-NNSVPQ--GLS 425
G V+ P +++ + +E F P+ +V+ AV++ SV + ++
Sbjct: 416 HPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAMT 475
Query: 426 SSIFTRSPE 434
+T PE
Sbjct: 476 VGAYTTDPE 484
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 55.7 bits (134), Expect = 3e-08
Identities = 65/335 (19%), Positives = 129/335 (38%), Gaps = 27/335 (8%)
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ + N L P+GVV IT P + + + + I+L N +++ P +T
Sbjct: 80 VLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQ 139
Query: 199 AITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
L+ + P + E+ Q + K P I L+ TG G V + +
Sbjct: 140 RAATLLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATG----GPAVVKAAY 195
Query: 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
+ +GN ++I + ADIK AV+S++ + G C + + +++ +S+Y V+
Sbjct: 196 SSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVM 255
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI--LTGGSVI-ES 374
+ L++ P KN + + + KI G V E+
Sbjct: 256 RLFEGQGAYKLTAEELQQ-------VQPVILKNGDVNRDIVGQDAYKIAAAAGLKVPQET 308
Query: 375 EGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ----GLSSSIFT 430
+ T + E +PVL + + F +A ++ G +S++++
Sbjct: 309 RILIGEVTSLAEHEPF---AHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYS 365
Query: 431 R---SPENIFKWLGPHGSDTGIVNVNIPTNGAEIG 462
+ EN+ ++ + T N P + +G
Sbjct: 366 DNIKAIENMNQF--ANAMKTSRFVKNGPCSQGGLG 398
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 4e-08
Identities = 106/416 (25%), Positives = 172/416 (41%), Gaps = 66/416 (15%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLED---YEEGMKACSEASKIWMELPAPKR 80
V GKWK + ++P+N K +V + ++ + + ++ C + S + L P+R
Sbjct: 2 LVAGKWKGASNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK-SGLHNPLKNPER 60
Query: 81 ----GEVVRQIGDALR--EKLHHLGRLLSIEMGKILPEGIGEV---QEVI-----DMCDF 126
G+V ++ LR E RL+ K + +GEV ++ + D F
Sbjct: 61 YLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRF 120
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
L+R N + + W P G V +IT FNFP + AL GN
Sbjct: 121 ---LARSFNVPGDHQGQQSSGY--RW-PYGPVAIITPFNFPLEIPALQLMGALFMGN--- 171
Query: 187 WKGAPTTPLITI-AITKLVSEVFER-NKLPGAIFTSF----CGGAEIGQAIAK-DPRISL 239
PL+ + + +V E F R L G T G + + + + +PR++L
Sbjct: 172 ------KPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTL 225
Query: 240 VSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD-ADIKLAVRSVLFAAVGTAGQ 298
FTGS+KV + +H GK LE +G + I+ D +D+ A +GQ
Sbjct: 226 --FTGSSKVAERLALELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQ 280
Query: 299 RCTTCRRLLIHESIYQT-VLDQLVDVYKQVKIGDPLEKGTLLGPLHT--PESRKNFEKGI 355
+C+ L HE+ Q +LD+L + +Q K+ D +GP+ T E + +
Sbjct: 281 KCSAQSILFAHENWVQAGILDKLKALAEQRKLED-----LTIGPVLTWTTERILDHVDKL 335
Query: 356 ENIKSQ----GGKILTGGSVIESEGNFVQPTIV-------EISPTADIVKEELFAP 400
I GGK LT S+ G +PT V I ++V E+F P
Sbjct: 336 LAIPGAKVLFGGKPLTNHSIPSIYGA-YEPTAVFVPLEEIAIEENFELVTTEVFGP 390
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 5e-07
Identities = 42/249 (16%), Positives = 82/249 (32%), Gaps = 27/249 (10%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL 213
P+GV I P + + +A + N +++ P+ P A+ L +
Sbjct: 100 PIGVTMHILPSTNPLSGI-TSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHGP 158
Query: 214 PGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAI 273
+ E+ + + P+I L+ TG V V ++ N+
Sbjct: 159 KILVLYVPHPSDELAEELLSHPKIDLIVATGGRD---AVDAAVKHSPHIPVIGFGAGNSP 215
Query: 274 IIMDD-ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD--VYKQVKI- 329
+++D+ AD + A SV + C + + L + + + + ++ V + +K+
Sbjct: 216 VVVDETADEERASGSVHDSKF-FDQNACASEQNLYVVDDVLDPLYEEFKLKLVVEGLKVP 274
Query: 330 ------------GDPLEKGTLLGPLHTPESRKNFEKGIEN---IKSQGGKILTGGSVIES 374
E + PL + +EN I GG T
Sbjct: 275 QETKPLSKETTPSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHK 334
Query: 375 EGN---FVQ 380
FVQ
Sbjct: 335 INKVDDFVQ 343
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 4e-05
Identities = 75/337 (22%), Positives = 133/337 (39%), Gaps = 32/337 (9%)
Query: 145 NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLV 204
N + L + P GV+G IT P + N+ L GN VV+ P ++ +L+
Sbjct: 88 NGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELI 147
Query: 205 SEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263
++ P + + E + P I+L+ TG V + GK
Sbjct: 148 NKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKK 202
Query: 264 LLEL-SGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322
+ +GN +++ + ADI+ A R ++ A C + ++ +S+ ++ +
Sbjct: 203 AIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQR 262
Query: 323 VYKQVKIGDP-----LEKGTLLGPLHTPESRKNFEKGIENIKSQ-GGKILTGGSVIESEG 376
+ D LE L TP ++K K I G ++ +I
Sbjct: 263 -NGAYVLNDEQAEQLLEVVLLTNKGATP-NKKWVGKDASKILKAAGIEVPADIRLI---- 316
Query: 377 NFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGL--SSSIFTRSPE 434
IVE V EE P+L V++ + F+EA+++ + G ++ I +++ E
Sbjct: 317 ------IVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVE 370
Query: 435 NIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKAT 471
N+ K T I N P+ A +G GGE T
Sbjct: 371 NLTKM--ARAMQTTIFVKNGPS-YAGLG--VGGEGYT 402
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 0.002
Identities = 74/337 (21%), Positives = 126/337 (37%), Gaps = 53/337 (15%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL 213
P+GV+ + P + + A IAL N +++ P +I K++ E
Sbjct: 95 PVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGA 154
Query: 214 P-GAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS-GNN 271
P G I E+ Q + K P + L+ TG MV+ GK + + GN
Sbjct: 155 PEGLIQWIEEPSIELTQELMKHPDVDLILATGGPG---MVKAA--YSSGKPAIGVGPGNV 209
Query: 272 AIIIMDDADIKLAVRSVLFAAV---GTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328
I + ADIK AV+ ++ + GT C + + +++ + IY V +L
Sbjct: 210 PAYIDETADIKRAVKDIILSKTFDNGTI---CASEQSVIVDDEIYDEVRAELKR------ 260
Query: 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV------IESEGNFVQP- 381
L E ++ EK + + G L V I P
Sbjct: 261 -----RGAYFL----NEEEKEKLEKALFD----DGGTLNPDIVGKSAQKIAELAGIEVPE 307
Query: 382 -TIVEISPTADIVKEELFA-----PVLYVMKFQTFEEAVKINNSVPQ----GLSSSIFTR 431
T V ++ + EE + PVL + + FEEA++ + + G ++ I +
Sbjct: 308 DTKVLVAEETGVGPEEPLSREKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSN 367
Query: 432 SPENIFKWLGPHGSDTGIVNVNIP-TNGAEIGGAFGG 467
E I ++ + VN P + G IG + G
Sbjct: 368 DEEVIEEF--ALRMPVSRILVNTPSSLGG-IGDTYNG 401
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|143398 cd07079, ALDH_F18-19_ProA-GPR, Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Score = 39.3 bits (93), Expect = 0.004
Identities = 49/223 (21%), Positives = 82/223 (36%), Gaps = 62/223 (27%)
Query: 141 SERPNHMMLETWN-PLGVVGVITAF-NFPCAVLGWN-----ACIALVCGNCVVWKGAPTT 193
PN + +E PLGV+G+I + + P N A + L GN V+ +G
Sbjct: 95 WTLPNGLQIEKVRVPLGVIGII--YESRP------NVTVDAAALCLKSGNAVILRGGSEA 146
Query: 194 PLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253
A+ +++ E E LP + L+ T V +++
Sbjct: 147 LHSNRALVEIIQEALEEAGLPEDA-------------------VQLIPDTDREAVQELLK 187
Query: 254 QT-----VHQRFGKCLLE-------------LSGNNAIIIMDDADIKLAVRSVLFAAVGT 295
+ R G L+ GN + + + AD+++AVR V+ A
Sbjct: 188 LDDYIDLIIPRGGAGLIRFVVENATIPVIKHGDGNCHVYVDESADLEMAVRIVVNAKT-- 245
Query: 296 AGQR---CTTCRRLLIHESIYQTVLDQLVDVY--KQVKI-GDP 332
QR C LL+H I + L +L + V++ GD
Sbjct: 246 --QRPSVCNALETLLVHRDIAEEFLPKLAEALREAGVELRGDE 286
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). Length = 406 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 508 | |||
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 100.0 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.81 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.43 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.08 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.41 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.68 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 97.55 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 97.28 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 97.22 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 97.06 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 96.94 | |
| PLN02926 | 431 | histidinol dehydrogenase | 96.51 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 96.27 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 96.14 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.13 |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-107 Score=856.96 Aligned_cols=508 Identities=86% Similarity=1.389 Sum_probs=481.5
Q ss_pred CCccchhhhhhhhcCCCCCCCCceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHH
Q 010506 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80 (508)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R 80 (508)
|-|+..+||+|++.....+++++||||+|+.++.+++++||.||+++++++.++.+|+++|+++|++|++.|++++.++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R 80 (508)
T PLN02315 1 MGFARKEYEFLSEIGLSSRNLGCYVGGEWRANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKR 80 (508)
T ss_pred CcchHHHHHHHHHHhcCccccCceECCEEecCCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 77899999999999999999999999999977788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEE
Q 010506 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGV 160 (508)
Q Consensus 81 ~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~ 160 (508)
.++|+++++.|+++.++|+++++.|+|||+.+++.|+..+++.++|++...+.+.++..+...++...+..++|+|||++
T Consensus 81 ~~~L~~~a~~l~~~~~~la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~ 160 (508)
T PLN02315 81 GEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGV 160 (508)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEE
Confidence 99999999999999999999999999999999999999999999999988777766544433334455678999999999
Q ss_pred EeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEE
Q 010506 161 ITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240 (508)
Q Consensus 161 i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v 240 (508)
|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+++|+.+.++.|+.||+++.|
T Consensus 161 I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v 240 (508)
T PLN02315 161 ITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLV 240 (508)
T ss_pred ECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999977889999999999999
Q ss_pred EEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHH
Q 010506 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320 (508)
Q Consensus 241 ~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L 320 (508)
+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 241 ~fTGS~~~G~~v~~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l 320 (508)
T PLN02315 241 SFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQL 320 (508)
T ss_pred EEECCHHHHHHHHHHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccc
Q 010506 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAP 400 (508)
Q Consensus 321 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgP 400 (508)
+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+.+|+|++|||+++++++.+++||+|||
T Consensus 321 ~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~v~~~~~i~~eE~FGP 400 (508)
T PLN02315 321 LTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIVEISPDADVVKEELFGP 400 (508)
T ss_pred HHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEEecCCCChHHhCCCcCC
Confidence 99999999999999999999999999999999999999999999999998655579999999988999999999999999
Q ss_pred eeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHH
Q 010506 401 VLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480 (508)
Q Consensus 401 vl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~ 480 (508)
|++|++|+|+||||+++|+++|||+++|||+|.+.+++++++.++++|+||||.++....+.+||||+|.||+|+++|.+
T Consensus 401 Vl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~ 480 (508)
T PLN02315 401 VLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480 (508)
T ss_pred EEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHH
Confidence 99999999999999999999999999999999999999984457999999999876655667899999999999999999
Q ss_pred HHHHhhheeEEEEeCCCCCCCccCCCCC
Q 010506 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508 (508)
Q Consensus 481 ~~~~~~~~k~v~~~~~~~~~~~~~~~~~ 508 (508)
++++||+.|+|+++++.++|+.|++.||
T Consensus 481 ~l~~ft~~k~v~~~~~~~~~~~~~~~~~ 508 (508)
T PLN02315 481 SWKQYMRRSTCTINYGNELPLAQGINFG 508 (508)
T ss_pred HHHHHhhEEEEEEecCCCCCcccCCCCC
Confidence 9999999999999988889999999987
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-105 Score=793.63 Aligned_cols=470 Identities=32% Similarity=0.559 Sum_probs=446.2
Q ss_pred CCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhccCChhHHHHHHHHHHHHHHHhHH
Q 010506 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 21 ~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
..+||||+|++ ++++++++||.||+++++|+.++.+||+.++++||+||+ .|++++..+|.++|++++++++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 47999999984 779999999999999999999999999999999999999 79999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHH
Q 010506 97 HLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 175 (508)
.|+.+.+.+.|||..+++ .++..+++.++|++.+++...+...+. ......++.++|+||++.|+|||||+....|++
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~-~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKl 179 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPT-DGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKL 179 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCC-CCceEEEecCCcceeeeEeccCchHHHHHHHhh
Confidence 999999999999999999 899999999999999998775544332 345578899999999999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH
Q 010506 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (508)
+|||++||+||+||++++|+|+..++ +++.++|+|+|++|+|+| +.+.+.+|.+|++|+.|.||||+.+|+.|++
T Consensus 180 aPALa~GNtvV~Kpae~tplsal~~~----~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~ 255 (501)
T KOG2450|consen 180 APALAAGNTVVLKPAEQTPLTALYLA----SLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIME 255 (501)
T ss_pred hhHHhhCcEEEecCCCCCCchHHHHH----HHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhh
Confidence 99999999999999999999999874 557899999999999999 9999999999999999999999999999999
Q ss_pred Hhhh-ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhh-cccCCC
Q 010506 255 TVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ-VKIGDP 332 (508)
Q Consensus 255 ~a~~-~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~-~~~g~p 332 (508)
.+++ ++|++++|+|||+|.||++|||++.|++.+..+.|+|+||.|++.+|+|||+++||+|+++++++..+ +++|||
T Consensus 256 aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP 335 (501)
T KOG2450|consen 256 AAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDP 335 (501)
T ss_pred hhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCC
Confidence 9885 48999999999999999999999999999999999999999999999999999999999999999966 999999
Q ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHH
Q 010506 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (508)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ 411 (508)
.++.+.+||+++..|++++..||+.++++|+++++||.+..+.|+|+.|||+ ++.++|.+++||+||||++|++|++.|
T Consensus 336 ~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~e 415 (501)
T KOG2450|consen 336 FDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEE 415 (501)
T ss_pred CCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHH
Confidence 9999999999999999999999999999999999999887788999999998 899999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 412 EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 412 eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|+|+++|++.|||+++|||+|.+++++++ .++++|+||||+... .+...||||+|+||+||+.|.+++.+|++.|+|
T Consensus 416 E~i~~AN~t~yGLAa~V~t~dl~~a~~va--~~l~aGtVwiN~y~~-~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv 492 (501)
T KOG2450|consen 416 EVIERANNTTYGLAAGVFTKDLDKAHRVA--NALQAGTVWINCYNV-FDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTV 492 (501)
T ss_pred HHHHHhcCCcccceeeEeccChHHHHHHH--HHhcCceEEEecccc-ccccCCccccccccCCccccHHHHhhcceeeEE
Confidence 99999999999999999999999999999 889999999999654 456789999999999999999999999999999
Q ss_pred EEeCCCC
Q 010506 492 TINYGNE 498 (508)
Q Consensus 492 ~~~~~~~ 498 (508)
+++++.+
T Consensus 493 ~v~~~~~ 499 (501)
T KOG2450|consen 493 TVKLPQK 499 (501)
T ss_pred EEeCCCC
Confidence 9998764
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-102 Score=817.32 Aligned_cols=467 Identities=29% Similarity=0.533 Sum_probs=437.0
Q ss_pred CCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHH
Q 010506 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (508)
Q Consensus 21 ~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (508)
..+||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|
T Consensus 11 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 90 (482)
T PRK11241 11 QQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDL 90 (482)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 45899999984 5678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHH
Q 010506 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (508)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 178 (508)
++++++|+|||+.+++.|+..+++.+++++...+...+...+...++...+.+++|+|||++|+|||||+.++++++++|
T Consensus 91 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 170 (482)
T PRK11241 91 ARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPA 170 (482)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHH
Confidence 99999999999999999999999999999988776654433332234456778999999999999999999999999999
Q ss_pred hhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhh
Q 010506 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (508)
Q Consensus 179 LaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (508)
|++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||+++.|+||||+++|+.|++.++
T Consensus 171 LaaGN~VVlKPs~~tp~~~~~l----~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa 246 (482)
T PRK11241 171 LAAGCTMVLKPASQTPFSALAL----AELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA 246 (482)
T ss_pred HHhCCEEEEECCCCChHHHHHH----HHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999876 5667899999999999998 6788999999999999999999999999999999
Q ss_pred hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCC
Q 010506 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337 (508)
Q Consensus 258 ~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~ 337 (508)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 247 ~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~ 326 (482)
T PRK11241 247 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGV 326 (482)
T ss_pred hcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHH
Q 010506 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKI 416 (508)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 416 (508)
++||++++.+++++.+++++++++|+++++||...+.+|+|++|||+ ++++++.+++||+||||++|++|+|+||||++
T Consensus 327 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~ 406 (482)
T PRK11241 327 TIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQ 406 (482)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999764346999999988 79999999999999999999999999999999
Q ss_pred hccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEe
Q 010506 417 NNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 417 ~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 494 (508)
+|+++|||++||||+|.+.+++++ .++++|+||||+... ..+.+||||+|.||+|+++|.+++++||+.|++++.
T Consensus 407 aN~s~~GL~a~Vft~d~~~a~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 407 ANDTEFGLAAYFYARDLSRVFRVG--EALEYGIVGINTGII-SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred hhCCCCCceEEEEcCCHHHHHHHH--HHcCccEEEECCCCC-CCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence 999999999999999999999999 889999999998654 334689999999999999999999999999999764
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-103 Score=748.41 Aligned_cols=468 Identities=31% Similarity=0.527 Sum_probs=446.8
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
.-..||+|+|++ ..++|+|.||++|+.|+.++..+.++.++||++|.+||+.|+.++..+|.++|+++.++|.+|.++
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~dd 102 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDD 102 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHH
Confidence 456799999994 668999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHH
Q 010506 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 177 (508)
|++++++|+|||+.|+++|+.....+++||++.+++..+...++..+++..++.++|+||+++|+|||||...+.++..+
T Consensus 103 La~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA 182 (503)
T KOG2451|consen 103 LATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA 182 (503)
T ss_pred HHHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence 99999999999999999999999999999999999999998888888888899999999999999999999999999999
Q ss_pred HhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC----ChhhHHHHHcCCCcCEEEEeCCHHHHHHHH
Q 010506 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG----GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (508)
Q Consensus 178 ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g----~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (508)
||++||+||+|||+++|++++.++ ++.++||+|+|++|+|++ ..+.++.|+.+|+|+.|+||||+.+|+.++
T Consensus 183 ALAaGCTvVvkPs~~TPlsaLala----~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~ 258 (503)
T KOG2451|consen 183 ALAAGCTVVVKPSEDTPLSALALA----KLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILM 258 (503)
T ss_pred HHhcCceEEEccCCCCchHHHHHH----HHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHH
Confidence 999999999999999999999875 457899999999999985 258899999999999999999999999999
Q ss_pred HHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCC
Q 010506 254 QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (508)
Q Consensus 254 ~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~ 333 (508)
++++.+.|++.+|||||.|+||++|||+|+|++..+..+|.++||.|.+.+|+|||++|||+|++.|.++++++++||.+
T Consensus 259 ~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~ 338 (503)
T KOG2451|consen 259 AQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGL 338 (503)
T ss_pred HhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-CCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHH
Q 010506 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI-ESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (508)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~-~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ 411 (508)
+++++.||||+..+.+++..++++|+++|+++++||+.. +.++.|++|||+ +++.+|-+.+||+|||+.+|++|+|.+
T Consensus 339 ~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdtee 418 (503)
T KOG2451|consen 339 DPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEE 418 (503)
T ss_pred CCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHH
Confidence 999999999999999999999999999999999999954 446699999987 899999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 412 EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 412 eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|+|+++|+++.||++|+||+|..+..+++ .++++|+|.+|... ..+...||||+|+||+||+++.+|+++|+.+|.+
T Consensus 419 Evi~~ANdt~vGLAgYvfs~~~s~~~rVa--e~LEvGmVGvNegl-is~~~~pFGGVKeSG~GREgskyGidey~~ik~i 495 (503)
T KOG2451|consen 419 EVIEWANDTRVGLAGYVFSNNLSRLFRVA--EALEVGMVGVNEGL-ISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYI 495 (503)
T ss_pred HHHHHhccCccceeeEEeccCHHHHHHHH--HHHhcceeecccce-ecccccCcCCccccccCccccccchhhhhhhhee
Confidence 99999999999999999999999999999 78999999999854 3445689999999999999999999999999999
Q ss_pred EEe
Q 010506 492 TIN 494 (508)
Q Consensus 492 ~~~ 494 (508)
++.
T Consensus 496 cig 498 (503)
T KOG2451|consen 496 CIG 498 (503)
T ss_pred eec
Confidence 874
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-102 Score=821.11 Aligned_cols=477 Identities=25% Similarity=0.415 Sum_probs=441.7
Q ss_pred CCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhH
Q 010506 18 PETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (508)
Q Consensus 18 ~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
+..+++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 111 ~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~ 190 (604)
T PLN02419 111 PPRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNM 190 (604)
T ss_pred ccccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhH
Confidence 45778899999984 4567999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHH
Q 010506 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 175 (508)
++|+++++.|+|||+.+++.|+...++.+++++..++...+...+....+...+..++|+|||++|+|||||+.+.++++
T Consensus 191 ~ela~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~i 270 (604)
T PLN02419 191 DKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMF 270 (604)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999988776655433322233345778999999999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHH
Q 010506 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (508)
++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.+.++.|+.|++|++|+||||+.+|+.|++.
T Consensus 271 apALaAGNtVVlKPSe~tp~ta~~l----~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~ 346 (604)
T PLN02419 271 PVAVTCGNTFILKPSEKDPGASVIL----AELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYAR 346 (604)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHH----HHHHHHhCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHH
Confidence 9999999999999999999999876 566789999999999999966788999999999999999999999999999
Q ss_pred hhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCC
Q 010506 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEK 335 (508)
Q Consensus 256 a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~ 335 (508)
++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|.++
T Consensus 347 Aa~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~ 425 (604)
T PLN02419 347 AAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEP 425 (604)
T ss_pred HhccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc---C-CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCH
Q 010506 336 GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI---E-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 336 ~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~---~-~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
+++|||+++..+++++.+++++++++|+++++||... + .+|+|++|||+ +++++|.+++||+||||++|++|+|+
T Consensus 426 ~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~ 505 (604)
T PLN02419 426 DADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSF 505 (604)
T ss_pred CCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCH
Confidence 9999999999999999999999999999999999752 1 36999999988 79999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC--CcchHHHHHHhhhe
Q 010506 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG--REAGSDSWKQYMRR 488 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g--~~~g~~~~~~~~~~ 488 (508)
||||+++|+++|||++||||+|.+++++++ .++++|.|+||+......+.+||||+|.||+| +++|.+++++|++.
T Consensus 506 dEAI~laN~s~yGLaasVfT~d~~~a~~~a--~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~ 583 (604)
T PLN02419 506 DEAISIINKNKYGNGAAIFTSSGAAARKFQ--MDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQI 583 (604)
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHH--HhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCe
Confidence 999999999999999999999999999999 88999999999875455567899999999999 79999999999999
Q ss_pred eEEEEeC-CCCCCC
Q 010506 489 STCTINY-GNELPL 501 (508)
Q Consensus 489 k~v~~~~-~~~~~~ 501 (508)
|+|+++. +-+.|+
T Consensus 584 K~v~~~~~~~~~~~ 597 (604)
T PLN02419 584 KLVTQKQKDIHSPF 597 (604)
T ss_pred EEEEEccCCccCCC
Confidence 9999876 233444
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-102 Score=807.59 Aligned_cols=465 Identities=36% Similarity=0.631 Sum_probs=437.0
Q ss_pred CceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHH
Q 010506 22 GCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRL 101 (508)
Q Consensus 22 ~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 101 (508)
.+||||+|+....+++++||+||+++++++.++.+|+++|+++|+.|++.|+.++..+|.++|++++++|+++.++|+++
T Consensus 2 ~~~i~g~~~~~~~~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~ 81 (472)
T COG1012 2 KLLIDGEWVDGASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAAL 81 (472)
T ss_pred CccCCCeecCCCCceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 57999999965559999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhc
Q 010506 102 LSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVC 181 (508)
Q Consensus 102 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaa 181 (508)
++.|+|||+.+++.|+...++.++|++...+.+.+...+... +...+..++|+|||++|+|||||+.+.+|++++||++
T Consensus 82 ~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaa 160 (472)
T COG1012 82 ITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPTDK-GSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAA 160 (472)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCC-CcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHc
Confidence 999999999999999999999999999998877665433322 5577889999999999999999999999999999999
Q ss_pred CCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhcc
Q 010506 182 GNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260 (508)
Q Consensus 182 GN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~ 260 (508)
||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 161 GntVV~KPse~tp~sa~~l----~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~ 236 (472)
T COG1012 161 GNTVVLKPSEQTPLSALAL----AELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANL 236 (472)
T ss_pred CCEEEEECcccCcHHHHHH----HHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcC
Confidence 9999999999999998776 5567789999999999999 7779999999999999999999999999999999999
Q ss_pred CceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhh-cccCCCCCCCCcc
Q 010506 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ-VKIGDPLEKGTLL 339 (508)
Q Consensus 261 ~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~-~~~g~p~~~~~~~ 339 (508)
||+++|||||||+||++|||++.|++.+++++|+|+||.|++.+|+|||+++||+|+++|.++ ++ +++||+.|+.+++
T Consensus 237 k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~ 315 (472)
T COG1012 237 KPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDL 315 (472)
T ss_pred CcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999 65 8999988999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhc
Q 010506 340 GPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINN 418 (508)
Q Consensus 340 gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 418 (508)
||+++.++++++.++|++++.+|++++.||.. .. |+|++|||+ +++++|.+++||+||||++|++|+|+||||+++|
T Consensus 316 Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~-~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN 393 (472)
T COG1012 316 GPLISEEQLDRVEGYIEDAVAEGARLLAGGKR-PG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELAN 393 (472)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcC-CC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHh
Confidence 99999999999999999999999999999984 33 999999988 6899999999999999999999999999999999
Q ss_pred cCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCC-CCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeCC
Q 010506 419 SVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTN-GAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 419 ~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~-~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
+++|||+++|||+|..++.+++ .++++|+|+||.... ......||||+|.||+|+++|.+++++|++.|++.+++.
T Consensus 394 ~t~yGL~a~v~t~d~~~~~~~~--~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~~ 470 (472)
T COG1012 394 DTEYGLAAAIFTRDLARAFRVA--RRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLG 470 (472)
T ss_pred CCCCCceEEEEcCCHHHHHHHH--hcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEecC
Confidence 9999999999999999999998 889999999998753 444568999999999999999999999999999998764
|
|
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-101 Score=808.47 Aligned_cols=473 Identities=68% Similarity=1.119 Sum_probs=443.8
Q ss_pred eecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 010506 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLS 103 (508)
Q Consensus 24 ~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~ 103 (508)
+|||+|+.++.+++++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|+++++
T Consensus 2 ~i~g~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~ 81 (474)
T cd07130 2 VYDGEWGGGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVS 81 (474)
T ss_pred eECCEEecCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999997678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCC
Q 010506 104 IEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGN 183 (508)
Q Consensus 104 ~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN 183 (508)
+|+|||+.+++.|+...++.+++++...+.+.+...+...++...+..++|+|||++|+|||||+.++++++++||++||
T Consensus 82 ~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN 161 (474)
T cd07130 82 LEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGN 161 (474)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCC
Confidence 99999999999999999999999988777665544333334445677899999999999999999999999999999999
Q ss_pred EEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCce
Q 010506 184 CVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263 (508)
Q Consensus 184 ~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~ 263 (508)
+||+|||+.+|.++..+++++.++|.++|+|+|++|+|+|+.+.++.|++||+||+|+||||+.+|+.|++.++++++|+
T Consensus 162 ~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~ 241 (474)
T cd07130 162 VVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRS 241 (474)
T ss_pred eEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcCCCE
Confidence 99999999999999999999999999999999999999997678999999999999999999999999999999999999
Q ss_pred eeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCC
Q 010506 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLH 343 (508)
Q Consensus 264 ~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~ 343 (508)
++|+|||||+||++|||++.|++.|++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++++||++
T Consensus 242 ~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli 321 (474)
T cd07130 242 LLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLH 321 (474)
T ss_pred EEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCC
Q 010506 344 TPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQG 423 (508)
Q Consensus 344 ~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 423 (508)
+..+++++.+++++++++|+++++||...+.+|+|++|||+...++|.+++||+||||++|++|+|++|||+++|+++||
T Consensus 322 ~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~g 401 (474)
T cd07130 322 TKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQG 401 (474)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCC
Confidence 99999999999999999999999999875556999999998533449999999999999999999999999999999999
Q ss_pred cEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeCC
Q 010506 424 LSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 424 l~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
|+++|||+|.+++++++++.++++|+|+||..+....+.+||||+|.||+|+++|.+++++|++.|+++++|+
T Consensus 402 L~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~~~ 474 (474)
T cd07130 402 LSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINYS 474 (474)
T ss_pred ceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEEEecC
Confidence 9999999999999999844459999999998766666789999999999999999999999999999988764
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-99 Score=799.40 Aligned_cols=472 Identities=64% Similarity=1.061 Sum_probs=444.3
Q ss_pred ceecCEEecC-CCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHH
Q 010506 23 CFVNGKWKAH-GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRL 101 (508)
Q Consensus 23 ~~i~g~~~~~-~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 101 (508)
+||||+|+.+ +.+++++||+||+++++++.++.++++.++++|++|++.|+++|.++|.++|+++++.|++++++|+++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~ 80 (478)
T cd07086 1 GVIGGEWVGSGGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRL 80 (478)
T ss_pred CcCCCEEecCCCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 4899999854 578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhc
Q 010506 102 LSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVC 181 (508)
Q Consensus 102 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaa 181 (508)
+++|+|||..+++.|+..+++.+++++...+.+.+...+...++...+..++|+|||++|+|||||+.+.++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaa 160 (478)
T cd07086 81 VSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVC 160 (478)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999988877665443333334456788999999999999999999999999999999
Q ss_pred CCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccC
Q 010506 182 GNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261 (508)
Q Consensus 182 GN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~ 261 (508)
||+||+|||+.+|.++..+++++.++|+++|+|+|++|+|+|+.+.++.|.+||++|.|+||||+.+|+.|++.++++++
T Consensus 161 GN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~~~ 240 (478)
T cd07086 161 GNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFG 240 (478)
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999855588999999999999999999999999999999999
Q ss_pred ceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCC
Q 010506 262 KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGP 341 (508)
Q Consensus 262 ~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gp 341 (508)
++++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||
T Consensus 241 ~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 320 (478)
T cd07086 241 RVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGP 320 (478)
T ss_pred cEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC--CCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhc
Q 010506 342 LHTPESRKNFEKGIENIKSQGGKILTGGSVIES--EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINN 418 (508)
Q Consensus 342 l~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~--~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 418 (508)
+++..+++++.+++++++++|+++++||...+. +|+|++|||+ ++++++.+++||+||||++|++|+|+||||+++|
T Consensus 321 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n 400 (478)
T cd07086 321 LINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINN 400 (478)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHh
Confidence 999999999999999999999999999976443 6899999988 6888999999999999999999999999999999
Q ss_pred cCCCCcEEEEecCCHHHHHHhhcccC--cceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeCC
Q 010506 419 SVPQGLSSSIFTRSPENIFKWLGPHG--SDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 419 ~~~~gl~~si~s~d~~~~~~~~~~~~--~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
+++|||+++|||+|.+++++++ .+ +++|+|+||+++....+.+||||+|.||+|+++|.+++++|+++|+|+++++
T Consensus 401 ~~~~gL~a~v~t~d~~~a~~~~--~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~~~ 478 (478)
T cd07086 401 DVPQGLSSSIFTEDLREAFRWL--GPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINYS 478 (478)
T ss_pred CCCCcceEEEEcCCHHHHHHHH--hcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceEEEEEeCC
Confidence 9999999999999999999999 77 9999999999766666789999999999999999999999999999998754
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-99 Score=794.07 Aligned_cols=465 Identities=27% Similarity=0.445 Sum_probs=433.0
Q ss_pred CCceecCEEec-CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010506 21 PGCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 21 ~~~~i~g~~~~-~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
+++||||+|+. ++.+++++||.||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~~i~g~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 81 (472)
T TIGR03374 2 HKLLINGELVSGEGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFA 81 (472)
T ss_pred CCceECCEEecCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 46899999984 56789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHH
Q 010506 100 RLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (508)
Q Consensus 100 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 178 (508)
+++++|+|||..+++ .|+..+++.+++++...+.+.+...+...++...+..++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~A 161 (472)
T TIGR03374 82 ELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPA 161 (472)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHHH
Confidence 999999999999986 5999999999999887776654322222233456788999999999999999999999999999
Q ss_pred hhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhh
Q 010506 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (508)
Q Consensus 179 LaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (508)
|++||+||+|||+.+|.++..++++ +.+ ++|+|++|+|+| +.+.++.|+.||++|.|+||||+.+|+.|++.++
T Consensus 162 LaaGN~VV~KPs~~tp~~~~~l~~l----~~~-~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 236 (472)
T TIGR03374 162 LAAGNCVVLKPSEITPLTALKLAEL----AKD-IFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA 236 (472)
T ss_pred HhcCCEEEecCCCCCCHHHHHHHHH----HHH-hCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999887655 445 499999999999 7788999999999999999999999999999999
Q ss_pred hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCC
Q 010506 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337 (508)
Q Consensus 258 ~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~ 337 (508)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 237 ~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~ 316 (472)
T TIGR03374 237 PSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDEST 316 (472)
T ss_pred hcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHCC-CeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHH
Q 010506 338 LLGPLHTPESRKNFEKGIENIKSQG-GKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK 415 (508)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~g-a~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 415 (508)
++||+++..+++++.++|++++++| +++++||...+..|+|+.|||+ ++++++++++||+||||++|++|+|.||||+
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~ 396 (472)
T TIGR03374 317 ELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVN 396 (472)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHH
Confidence 9999999999999999999999999 7999999764456899999988 6899999999999999999999999999999
Q ss_pred HhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010506 416 INNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 416 ~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
++|+++|||++||||+|.+++.+++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 397 ~an~~~~gL~a~vft~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 397 WANDSQYGLASSVWTKDVGRAHRLS--ARLQYGCTWVNTHFM-LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999 889999999998653 45678999999999999999999999999999975
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-99 Score=797.70 Aligned_cols=480 Identities=30% Similarity=0.508 Sum_probs=443.1
Q ss_pred hhhhhhhhcCCCCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHH
Q 010506 6 QEYEFLSEIGLSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83 (508)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~ 83 (508)
++.++|..+. ..+.++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++
T Consensus 12 ~~~~~~~~~~--~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~ 89 (498)
T PLN02278 12 SALVKLRNAG--LLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKI 89 (498)
T ss_pred HHHHHhhcCC--CCcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 3445555543 34477999999984 4678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeC
Q 010506 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITA 163 (508)
Q Consensus 84 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 163 (508)
|+++++.|++++++|++++++|+|||..+++.|+..+++.+++++...+...+...+...++...+.+++|+|||++|+|
T Consensus 90 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~P 169 (498)
T PLN02278 90 LRRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITP 169 (498)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECC
Confidence 99999999999999999999999999999999999999999999988776655433333234456678899999999999
Q ss_pred CCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEE
Q 010506 164 FNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSF 242 (508)
Q Consensus 164 ~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~f 242 (508)
||||+.+.++++++||++||+||+|||+.+|.++..+ .++|.++|+|+|++|+|+| +.+.++.|+.||+|+.|+|
T Consensus 170 wN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l----~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~f 245 (498)
T PLN02278 170 WNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAA----AELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITF 245 (498)
T ss_pred CccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHH----HHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEE
Confidence 9999999999999999999999999999999998765 5668899999999999998 5678899999999999999
Q ss_pred eCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHH
Q 010506 243 TGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322 (508)
Q Consensus 243 tGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~ 322 (508)
|||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++|++|+++|++
T Consensus 246 TGS~~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~ 325 (498)
T PLN02278 246 TGSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSK 325 (498)
T ss_pred ECcHHHHHHHHHHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccce
Q 010506 323 VYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPV 401 (508)
Q Consensus 323 ~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPv 401 (508)
+++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+.+|+|++|||+ +++++++++++|+||||
T Consensus 326 ~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPV 405 (498)
T PLN02278 326 AVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPV 405 (498)
T ss_pred HHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCE
Confidence 99999999999999999999999999999999999999999999999764446899999987 78999999999999999
Q ss_pred eEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHH
Q 010506 402 LYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDS 481 (508)
Q Consensus 402 l~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~ 481 (508)
++|++|+|+||||+++|+++|||+++|||+|.+.+++++ .++++|.|+||+... ..+.+||||+|.||+|+++|.++
T Consensus 406 l~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~G~~~ 482 (498)
T PLN02278 406 APLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVS--EALEYGIVGVNEGLI-STEVAPFGGVKQSGLGREGSKYG 482 (498)
T ss_pred EEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcCeEEECCCCC-CCCCCCcCCcccCcCCccchHHH
Confidence 999999999999999999999999999999999999999 889999999998654 33568999999999999999999
Q ss_pred HHHhhheeEEEEe
Q 010506 482 WKQYMRRSTCTIN 494 (508)
Q Consensus 482 ~~~~~~~k~v~~~ 494 (508)
+++||+.|+++++
T Consensus 483 l~~ft~~k~i~~~ 495 (498)
T PLN02278 483 IDEYLEIKYVCLG 495 (498)
T ss_pred HHHhheeEEEEEe
Confidence 9999999999763
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-99 Score=798.59 Aligned_cols=469 Identities=28% Similarity=0.474 Sum_probs=436.1
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhccCChhHHHHHHHHHHHHHHHhH
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKL 95 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
.+++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++
T Consensus 20 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 99 (501)
T PLN02766 20 FTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHI 99 (501)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 345799999984 467899999999999999999999999999999999997 5999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHH
Q 010506 96 HHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (508)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 174 (508)
++|++++++|+|||..+++ .|+...++.+++++...+...++..... .....+..++|+|||++|+|||||+.+.+++
T Consensus 100 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 178 (501)
T PLN02766 100 EELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMS-RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMK 178 (501)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEeccceEEEEECCCCChHHHHHHH
Confidence 9999999999999999997 5999999999999988766655432221 2334567899999999999999999999999
Q ss_pred HHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHH
Q 010506 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (508)
Q Consensus 175 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (508)
+++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||++|.|+||||+.+|+.|+
T Consensus 179 ~~~ALaaGN~VVlKPs~~tp~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~ 254 (501)
T PLN02766 179 VAPALAAGCTMVVKPAEQTPLSALFY----AHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIM 254 (501)
T ss_pred HHHHHHcCCEEEEeCCCCchHHHHHH----HHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999998866 5567899999999999999 678899999999999999999999999999
Q ss_pred HHhh-hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCC
Q 010506 254 QTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (508)
Q Consensus 254 ~~a~-~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p 332 (508)
+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 255 ~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p 334 (501)
T PLN02766 255 QAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDP 334 (501)
T ss_pred HHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 9998 589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHH
Q 010506 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (508)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ 411 (508)
.++++++||+++.+++++++++|++++.+|+++++||...+..|+|++|||+ ++++++++++||+||||++|++|+|++
T Consensus 335 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~d 414 (501)
T PLN02766 335 FDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVE 414 (501)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHH
Confidence 9999999999999999999999999999999999999764457899999988 789999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 412 EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 412 eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|||+++|+++|||++||||+|.+++++++ .++++|+|+||+.. ..++.+||||+|.||+|+++|.+++++|++.|++
T Consensus 415 eai~~aN~~~~GL~a~Vft~d~~~a~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v 491 (501)
T PLN02766 415 EAIKKANNTKYGLAAGIVTKDLDVANTVS--RSIRAGTIWVNCYF-AFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSV 491 (501)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCCC-CCCCCCCcCCcccCcCCccchHHHHHHHhceEEE
Confidence 99999999999999999999999999999 78999999999854 3456789999999999999999999999999999
Q ss_pred EEeCC
Q 010506 492 TINYG 496 (508)
Q Consensus 492 ~~~~~ 496 (508)
++++-
T Consensus 492 ~~~~~ 496 (501)
T PLN02766 492 VTPLY 496 (501)
T ss_pred EEecc
Confidence 98753
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-99 Score=792.18 Aligned_cols=470 Identities=29% Similarity=0.533 Sum_probs=436.4
Q ss_pred CCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhccCChhHHHHHHHHHHHHHHHh
Q 010506 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREK 94 (508)
Q Consensus 19 ~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
...++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|+++++.|+++
T Consensus 4 ~~~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 83 (486)
T cd07140 4 MPHQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEH 83 (486)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHh
Confidence 4467899999983 567899999999999999999999999999999999998 599999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCC--CCC-ceeEEEEeecceEEEEeCCCCchhh
Q 010506 95 LHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSE--RPN-HMMLETWNPLGVVGVITAFNFPCAV 170 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~P~GVv~~i~p~n~P~~~ 170 (508)
+++|+++++.|+|||..+++ .|+...++.+++++.+.+...+...+.. .++ ...+..++|+|||++|+|||||+.+
T Consensus 84 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~ 163 (486)
T cd07140 84 QEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMM 163 (486)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHH
Confidence 99999999999999999997 6999999999999988776655433321 122 2356789999999999999999999
Q ss_pred hHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHH
Q 010506 171 LGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG 249 (508)
Q Consensus 171 ~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g 249 (508)
.++++++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||+|+.|+||||+.+|
T Consensus 164 ~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l----~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g 239 (486)
T cd07140 164 LAWKMAACLAAGNTVVLKPAQVTPLTALKF----AELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIG 239 (486)
T ss_pred HHHHHHHHHHhCCEEEEECCccCcHHHHHH----HHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHH
Confidence 999999999999999999999999999876 5667899999999999998 67889999999999999999999999
Q ss_pred HHHHHHhhh-ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcc
Q 010506 250 LMVQQTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328 (508)
Q Consensus 250 ~~i~~~a~~-~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~ 328 (508)
+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 240 ~~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~ 319 (486)
T cd07140 240 KHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMK 319 (486)
T ss_pred HHHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCC
Confidence 999999996 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEe
Q 010506 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (508)
Q Consensus 329 ~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~ 407 (508)
+|+|.++++++||+++.++++++.++|++++++|+++++||...+..|+|++|||+ ++++++.+++||+||||++|++|
T Consensus 320 ~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~ 399 (486)
T cd07140 320 IGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKF 399 (486)
T ss_pred ccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEc
Confidence 99999999999999999999999999999999999999999765557899999988 78999999999999999999999
Q ss_pred C--CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHh
Q 010506 408 Q--TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQY 485 (508)
Q Consensus 408 ~--~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~ 485 (508)
+ |++|||+++|+++|||++||||+|.+.+++++ .++++|.|+||+... ..+.+||||+|.||+|+++|.+++++|
T Consensus 400 ~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~f 476 (486)
T cd07140 400 DDGDVDGVLQRANDTEYGLASGVFTKDINKALYVS--DKLEAGTVFVNTYNK-TDVAAPFGGFKQSGFGKDLGEEALNEY 476 (486)
T ss_pred CCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCcCCcccCcCCCcchHHHHHHh
Confidence 8 69999999999999999999999999999999 889999999998643 445689999999999999999999999
Q ss_pred hheeEEEEeC
Q 010506 486 MRRSTCTINY 495 (508)
Q Consensus 486 ~~~k~v~~~~ 495 (508)
|+.|+++++|
T Consensus 477 t~~k~v~~~~ 486 (486)
T cd07140 477 LKTKTVTIEY 486 (486)
T ss_pred hcEEEEEEeC
Confidence 9999998763
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-98 Score=790.23 Aligned_cols=467 Identities=26% Similarity=0.481 Sum_probs=432.5
Q ss_pred CceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH-hccCChhHHHHHHHHHHHHHHHhHHHH
Q 010506 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI-WMELPAPKRGEVVRQIGDALREKLHHL 98 (508)
Q Consensus 22 ~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (508)
++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++. |++++.++|.++|+++++.|++++++|
T Consensus 1 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (477)
T cd07113 1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEEL 80 (477)
T ss_pred CCeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHH
Confidence 3689999984 4567999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhh-hHHHHHHHHHHHhhhhhhhcCCcccCCC-----CCceeEEEEeecceEEEEeCCCCchhhhH
Q 010506 99 GRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSER-----PNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (508)
Q Consensus 99 a~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 172 (508)
++++++|+|||..+++. |+...++.+++++.+.+...+....... .....+.+++|+|||++|+|||||+.+.+
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 160 (477)
T cd07113 81 AQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAV 160 (477)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHH
Confidence 99999999999999985 9999999999998877665443321111 12345678999999999999999999999
Q ss_pred HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHH
Q 010506 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (508)
Q Consensus 173 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (508)
+++++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+|+...++.|++||++|+|+||||+.+|+.|
T Consensus 161 ~~i~~ALaaGN~VvlKPs~~tp~~~~~l----~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i 236 (477)
T cd07113 161 WKIGAALATGCTIVIKPSEFTPLTLLRV----AELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKI 236 (477)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHH----HHHHHHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 9999999999999999999999998866 566789999999999999843488999999999999999999999999
Q ss_pred HHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCC
Q 010506 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (508)
Q Consensus 253 ~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p 332 (508)
++.++++++|+++|+|||||+||++|||++.|++.|++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 237 ~~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (477)
T cd07113 237 GRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSP 316 (477)
T ss_pred HHHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHH
Q 010506 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (508)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ 411 (508)
.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ +++++++++++|+||||++|++|+|+|
T Consensus 317 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~d 396 (477)
T cd07113 317 MDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEE 396 (477)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHH
Confidence 9999999999999999999999999999999999999764446999999987 789999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 412 EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 412 eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|||+++|+++|||++||||+|.+++++++ .++++|+|+||.++. .++.+||||+|.||+|+++|.+++++||+.|+|
T Consensus 397 eai~~~n~~~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v 473 (477)
T cd07113 397 ELIQLINDTPFGLTASVWTNNLSKALRYI--PRIEAGTVWVNMHTF-LDPAVPFGGMKQSGIGREFGSAFIDDYTELKSV 473 (477)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCCCCCccccCCccchHHHHHHhhceEEE
Confidence 99999999999999999999999999999 789999999998643 456789999999999999999999999999999
Q ss_pred EEeC
Q 010506 492 TINY 495 (508)
Q Consensus 492 ~~~~ 495 (508)
+++|
T Consensus 474 ~~~~ 477 (477)
T cd07113 474 MIRY 477 (477)
T ss_pred EEeC
Confidence 8753
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-98 Score=793.66 Aligned_cols=469 Identities=27% Similarity=0.468 Sum_probs=436.3
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH--hccCChhHHHHHHHHHHHHHHHhH
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPAPKRGEVVRQIGDALREKL 95 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
.+.+||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++|++. |+.++.++|.++|+++++.|++++
T Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 136 (538)
T PLN02466 57 YTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHN 136 (538)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 446899999983 5788999999999999999999999999999999999974 999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHH
Q 010506 96 HHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (508)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 174 (508)
++|++++++|+|||..+++ .|+..+++.+++++.+.+...+...+.. .....+..++|+|||++|+|||||+.+.+++
T Consensus 137 ~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~ 215 (538)
T PLN02466 137 DELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPAD-GPHHVQTLHEPIGVAGQIIPWNFPLLMFAWK 215 (538)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEecceEEEEECCCchHHHHHHHH
Confidence 9999999999999999996 5999999999999988776655443322 2234578899999999999999999999999
Q ss_pred HHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHH
Q 010506 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (508)
Q Consensus 175 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (508)
+++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.+..|++||++|.|+||||+.+|+.|+
T Consensus 216 i~pALaaGN~VVlKPs~~tp~~~~~l----~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~ 291 (538)
T PLN02466 216 VGPALACGNTIVLKTAEQTPLSALYA----AKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVL 291 (538)
T ss_pred HhHHHHcCCEEEeECCCCCcHHHHHH----HHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999876 5567899999999999999 677889999999999999999999999999
Q ss_pred HHhhh-ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCC
Q 010506 254 QTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (508)
Q Consensus 254 ~~a~~-~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p 332 (508)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++.++++|+|
T Consensus 292 ~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p 371 (538)
T PLN02466 292 ELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDP 371 (538)
T ss_pred HHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99985 88999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHH
Q 010506 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (508)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ 411 (508)
.++++++||+++.++++++++++++++++|+++++||...+..|+|++|||+ ++++++++++||+||||++|++|+|+|
T Consensus 372 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~d 451 (538)
T PLN02466 372 FKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLD 451 (538)
T ss_pred ccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHH
Confidence 9999999999999999999999999999999999999875557899999988 689999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 412 EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 412 eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|||+++|+++|||+++|||+|.+++.+++ .++++|+|+||+.. ..++.+||||+|.||+|+++|.+++++|++.|++
T Consensus 452 eAi~~aN~~~~GL~a~VfT~d~~~a~~~~--~~l~aG~v~IN~~~-~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v 528 (538)
T PLN02466 452 EVIRRANNTRYGLAAGVFTQNLDTANTLS--RALRVGTVWVNCFD-VFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAV 528 (538)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCeeeEEECCCC-CCCCCCCcCCCCcCccCcccHHHHHHHhcceEEE
Confidence 99999999999999999999999999999 88999999999754 3456789999999999999999999999999999
Q ss_pred EEeCC
Q 010506 492 TINYG 496 (508)
Q Consensus 492 ~~~~~ 496 (508)
++++.
T Consensus 529 ~~~~~ 533 (538)
T PLN02466 529 VTPLK 533 (538)
T ss_pred EEeCC
Confidence 88753
|
|
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-98 Score=788.62 Aligned_cols=469 Identities=30% Similarity=0.483 Sum_probs=435.8
Q ss_pred CCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHH
Q 010506 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (508)
Q Consensus 21 ~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (508)
+++||||+|+. ++.+++++||+||+++++++.++.+|++.++++|++|++.|+.+|.++|.++|+++++.|+++.++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (478)
T cd07085 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDEL 80 (478)
T ss_pred CCceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35799999984 4578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHH
Q 010506 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (508)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 178 (508)
+++++.|+|||..+++.|+...++.+++++...+...++.......+...+..++|+|||++|+|||||+.+.++++++|
T Consensus 81 ~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~A 160 (478)
T cd07085 81 ARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMA 160 (478)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999887766655443322223456788999999999999999999999999999
Q ss_pred hhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhh
Q 010506 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258 (508)
Q Consensus 179 LaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~ 258 (508)
|++||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+|+.+.+..|++||+++.|+||||+.+|+.|++.+++
T Consensus 161 LaaGN~VvlKps~~tp~~~~~l----~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~ 236 (478)
T cd07085 161 IACGNTFVLKPSERVPGAAMRL----AELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAA 236 (478)
T ss_pred HhcCCEEEEECCCcCcHHHHHH----HHHHHHhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence 9999999999999999999876 455788999999999999877788999999999999999999999999999999
Q ss_pred ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCc
Q 010506 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTL 338 (508)
Q Consensus 259 ~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~ 338 (508)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~ 316 (478)
T cd07085 237 NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGAD 316 (478)
T ss_pred cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHH
Q 010506 339 LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (508)
Q Consensus 339 ~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 413 (508)
+||+++..+++++.+++++++++|+++++||.... .+|+|++|||+ ++++++.++++|+||||++|++|+|++||
T Consensus 317 ~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea 396 (478)
T cd07085 317 MGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEA 396 (478)
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHH
Confidence 99999999999999999999999999999997522 36899999988 68899999999999999999999999999
Q ss_pred HHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC--CcchHHHHHHhhheeEE
Q 010506 414 VKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG--REAGSDSWKQYMRRSTC 491 (508)
Q Consensus 414 i~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g--~~~g~~~~~~~~~~k~v 491 (508)
|+++|+++|||++||||+|.+++++++ .++++|+|+||+++....+.+||||+|.||+| +++|.+++++||+.|++
T Consensus 397 i~~~N~~~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v 474 (478)
T cd07085 397 IAIINANPYGNGAAIFTRSGAAARKFQ--REVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTV 474 (478)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEE
Confidence 999999999999999999999999999 78999999999976555567899999999999 47899999999999999
Q ss_pred EEeC
Q 010506 492 TINY 495 (508)
Q Consensus 492 ~~~~ 495 (508)
++++
T Consensus 475 ~~~~ 478 (478)
T cd07085 475 TSRW 478 (478)
T ss_pred EEeC
Confidence 8763
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-97 Score=787.85 Aligned_cols=471 Identities=28% Similarity=0.520 Sum_probs=437.9
Q ss_pred CCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHh
Q 010506 17 SPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREK 94 (508)
Q Consensus 17 ~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
...++++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|+++
T Consensus 3 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~ 82 (488)
T PRK13252 3 RQPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRER 82 (488)
T ss_pred cCccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 345678899999984 467899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHH
Q 010506 95 LHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 173 (508)
+++|++++++|+|||..+++ .|+...++.+++++...+...++..+.. .+...+.+++|+|||++|+|||||+.+.++
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~ 161 (488)
T PRK13252 83 NDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLR-GGSFVYTRREPLGVCAGIGAWNYPIQIACW 161 (488)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEEeeeeEEEEECCCchHHHHHHH
Confidence 99999999999999999997 4999999999999988776655433222 234567789999999999999999999999
Q ss_pred HHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHH
Q 010506 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (508)
Q Consensus 174 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (508)
++++||++||+||+|||+.+|.++..++ +++.++|+|+|++|+|+|+.+.++.|+.||++|.|+||||+++|+.|.
T Consensus 162 ~~~~ALaaGN~Vv~Kps~~~p~t~~~l~----~~~~~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~ 237 (488)
T PRK13252 162 KSAPALAAGNAMIFKPSEVTPLTALKLA----EIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVM 237 (488)
T ss_pred HHHHHHhcCCeEEEeCCccCcHHHHHHH----HHHHHcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 9999999999999999999999998764 557889999999999998545899999999999999999999999999
Q ss_pred HHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCC
Q 010506 254 QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (508)
Q Consensus 254 ~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~ 333 (508)
+.++.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.
T Consensus 238 ~~aa~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 317 (488)
T PRK13252 238 AAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPM 317 (488)
T ss_pred HHHhhcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEeC
Q 010506 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ 408 (508)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~ 408 (508)
++++++||++++.+++++++++++++++|+++++||...+ .+|+|++|||+ ++++++++++||+||||++|++|+
T Consensus 318 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~ 397 (488)
T PRK13252 318 DPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFD 397 (488)
T ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeC
Confidence 9999999999999999999999999999999999996532 35999999988 688999999999999999999999
Q ss_pred CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhe
Q 010506 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRR 488 (508)
Q Consensus 409 ~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~ 488 (508)
|++|||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+.. ...+.+||||+|.||+|+++|.+++++||+.
T Consensus 398 ~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~ 474 (488)
T PRK13252 398 DEDEVIARANDTEYGLAAGVFTADLSRAHRVI--HQLEAGICWINTWG-ESPAEMPVGGYKQSGIGRENGIATLEHYTQI 474 (488)
T ss_pred CHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHH--HhcCccEEEECCCC-CCCCCCCCCCCccCcCCcCChHHHHHHhcce
Confidence 99999999999999999999999999999999 78999999999854 3455789999999999999999999999999
Q ss_pred eEEEEeC
Q 010506 489 STCTINY 495 (508)
Q Consensus 489 k~v~~~~ 495 (508)
|+|++++
T Consensus 475 k~i~~~~ 481 (488)
T PRK13252 475 KSVQVEM 481 (488)
T ss_pred EEEEEeC
Confidence 9999875
|
|
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-98 Score=787.07 Aligned_cols=466 Identities=34% Similarity=0.591 Sum_probs=435.2
Q ss_pred CCceecCEEecCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010506 21 PGCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 21 ~~~~i~g~~~~~~~~~~v~~P~-~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
+++||||+|+.+...++++||. ||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+
T Consensus 1 ~~~~i~g~~~~~~~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela 80 (473)
T cd07097 1 YRNYIDGEWVAGGDGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELA 80 (473)
T ss_pred CCceECCEEecCCCCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 4679999998655668999999 599999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHh
Q 010506 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (508)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 179 (508)
++++.|+|||+.+++.|+..+++.+++++...+...+.......++...+..++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~AL 160 (473)
T cd07097 81 RLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPAL 160 (473)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999877766554333222344567889999999999999999999999999999
Q ss_pred hcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhh
Q 010506 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258 (508)
Q Consensus 180 aaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~ 258 (508)
++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.+..|+.|++++.|+||||+.+|+.|++.+++
T Consensus 161 aaGN~VIlKps~~~p~~~~~l----~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 236 (473)
T cd07097 161 AYGNTVVFKPAELTPASAWAL----VEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAA 236 (473)
T ss_pred HcCCEEEEeCCCCCcHHHHHH----HHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 999999999999999999876 4557899999999999999 66789999999999999999999999999999999
Q ss_pred ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCc
Q 010506 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTL 338 (508)
Q Consensus 259 ~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~ 338 (508)
+++|+++|+|||||+||++|||++.|++.|++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 316 (473)
T cd07097 237 RGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVD 316 (473)
T ss_pred cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHH
Q 010506 339 LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK 415 (508)
Q Consensus 339 ~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 415 (508)
+||+++..+++++.+++++++++|+++++||...+ ..|+|++|||+ ++++++++++||+||||++|++|+|++|||+
T Consensus 317 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 396 (473)
T cd07097 317 IGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALA 396 (473)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHH
Confidence 99999999999999999999999999999997643 35899999988 6889999999999999999999999999999
Q ss_pred HhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC-CcchHHHHHHhhheeEEE
Q 010506 416 INNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG-REAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 416 ~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g-~~~g~~~~~~~~~~k~v~ 492 (508)
++|+++|||+++|||+|.+.+++++ .++++|+|+||.++....+.+||||+|.||+| +++|.+++++|++.|+|.
T Consensus 397 ~~n~~~~gL~~~v~t~d~~~a~~~~--~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 397 IANDTEFGLSAGIVTTSLKHATHFK--RRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY 472 (473)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHH--HhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence 9999999999999999999999999 78999999999876555567899999999999 899999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-97 Score=786.43 Aligned_cols=467 Identities=27% Similarity=0.458 Sum_probs=433.6
Q ss_pred CCceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH-hccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010506 21 PGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI-WMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 21 ~~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
+++||||+|+.++.+++++||+||+++++++.++.+|++.++++|++|++. |+++|..+|.++|+++++.|+++.++|+
T Consensus 1 ~~~~i~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 80 (481)
T TIGR03216 1 IRNFINGAFVESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFL 80 (481)
T ss_pred CCceECCEEecCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 357999999977889999999999999999999999999999999999997 9999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCC---CceeEEEEeecceEEEEeCCCCchhhhHHHH
Q 010506 100 RLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERP---NHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 100 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 175 (508)
+++++|+|||..+++ .|+...++.+++++...+...+.......+ +...+..++|+|||++|+|||||+.+.++++
T Consensus 81 ~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~ 160 (481)
T TIGR03216 81 AAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKV 160 (481)
T ss_pred HHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHH
Confidence 999999999999997 499999999999988876655443221111 2345678899999999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-Ch-hhHHHHHcCCCcCEEEEeCCHHHHHHHH
Q 010506 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GA-EIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (508)
++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+| +. +.++.|..||++|.|+||||+.+|+.|+
T Consensus 161 ~~ALaaGN~vvlKPs~~tp~t~~~l----~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~ 236 (481)
T TIGR03216 161 GPALACGNTVVVKPSEETPGTATLL----GEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIM 236 (481)
T ss_pred HHHHHcCCEEEEECCccchHHHHHH----HHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 9999999999999999999999876 5567899999999999998 54 5788899999999999999999999999
Q ss_pred HHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCC
Q 010506 254 QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (508)
Q Consensus 254 ~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~ 333 (508)
+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|.++++++++|+|.
T Consensus 237 ~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~ 316 (481)
T TIGR03216 237 KAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPD 316 (481)
T ss_pred HHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-----CCCceeccEEE-ecCCCCcccccccccceeEeEEe
Q 010506 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (508)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~-----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~ 407 (508)
++++++||+++..+++++.+++++++++|+++++||...+ .+|+|++|||+ ++++++++++||+||||++|++|
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~ 396 (481)
T TIGR03216 317 DPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPF 396 (481)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEe
Confidence 9999999999999999999999999999999999997532 36999999988 68999999999999999999999
Q ss_pred CCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhh
Q 010506 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487 (508)
Q Consensus 408 ~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~ 487 (508)
+|.+|||+++|+++|||++||||+|.+.+++++ .++++|+|+||+... .++.+||||+|.||+|+++|.+++++|++
T Consensus 397 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~f~~ 473 (481)
T TIGR03216 397 DSEEEVIALANDTPYGLAASVWTEDLSRAHRVA--RQMEVGIVWVNSWFL-RDLRTPFGGSKLSGIGREGGVHSLEFYTE 473 (481)
T ss_pred CCHHHHHHHHhCCCccceEEEECCCHHHHHHHH--HhcCccEEEECCCCC-CCCCCCcCCcccCcCCcCchHHHHHHhhc
Confidence 999999999999999999999999999999999 789999999998654 35678999999999999999999999999
Q ss_pred eeEEEEe
Q 010506 488 RSTCTIN 494 (508)
Q Consensus 488 ~k~v~~~ 494 (508)
.|+++++
T Consensus 474 ~k~v~~~ 480 (481)
T TIGR03216 474 LTNVCIK 480 (481)
T ss_pred eEEEEEe
Confidence 9999875
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-98 Score=785.96 Aligned_cols=466 Identities=30% Similarity=0.513 Sum_probs=433.9
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH--hccCChhHHHHHHHHHHHHHHHhH
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPAPKRGEVVRQIGDALREKL 95 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
++++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++. |+.++.++|.++|+++++.|+++.
T Consensus 3 ~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (476)
T cd07142 3 HTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHA 82 (476)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhH
Confidence 456899999984 5678999999999999999999999999999999999975 999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHH
Q 010506 96 HHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (508)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 174 (508)
++|++++++|+|||..+++ .|+...++.+++++.+.+...+...+.. .....+..++|+|||++|+|||||+.+.+++
T Consensus 83 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~ 161 (476)
T cd07142 83 DELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPAD-GPHHVYTLHEPIGVVGQIIPWNFPLLMFAWK 161 (476)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeceeeEEEECCCccHHHHHHHH
Confidence 9999999999999999987 5999999999999988776655443322 2234567899999999999999999999999
Q ss_pred HHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHH
Q 010506 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (508)
Q Consensus 175 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (508)
+++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||++|.|+||||+.+|+.|+
T Consensus 162 i~~ALaaGN~VV~KPs~~tp~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~ 237 (476)
T cd07142 162 VGPALACGNTIVLKPAEQTPLSALLA----AKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIM 237 (476)
T ss_pred HHHHHHcCCEEEEECCCcccHHHHHH----HHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999876 5567899999999999998 667899999999999999999999999999
Q ss_pred HHhhh-ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCC
Q 010506 254 QTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (508)
Q Consensus 254 ~~a~~-~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p 332 (508)
+.+++ +++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus 238 ~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p 317 (476)
T cd07142 238 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDP 317 (476)
T ss_pred HHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99997 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHH
Q 010506 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (508)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ 411 (508)
.++++++||+++..+++++.+++++++++|+++++||...+.+|+|++|||+ ++++++++++||+||||++|++|+|++
T Consensus 318 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ 397 (476)
T cd07142 318 FRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVD 397 (476)
T ss_pred CCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHH
Confidence 9999999999999999999999999999999999999875557899999988 689999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 412 EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 412 eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|||+++|+++|||++||||+|.+.+++++ .++++|+|+||+.. ..++.+||||+|.||+|+++|.+++++||+.|++
T Consensus 398 eai~~~n~~~~gL~a~vft~d~~~a~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v 474 (476)
T cd07142 398 EVIKRANNSKYGLAAGVFSKNIDTANTLS--RALKAGTVWVNCYD-VFDASIPFGGYKMSGIGREKGIYALNNYLQVKAV 474 (476)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCCC-CCCCCCCCCCCccCcCCccchHHHHHHhhheeEE
Confidence 99999999999999999999999999999 78999999999854 4556789999999999999999999999999998
Q ss_pred EE
Q 010506 492 TI 493 (508)
Q Consensus 492 ~~ 493 (508)
++
T Consensus 475 ~~ 476 (476)
T cd07142 475 VM 476 (476)
T ss_pred eC
Confidence 63
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-97 Score=781.25 Aligned_cols=465 Identities=29% Similarity=0.526 Sum_probs=432.2
Q ss_pred CceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010506 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 22 ~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLA 81 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 5799999984 46789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhh-hHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHH
Q 010506 100 RLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (508)
Q Consensus 100 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 178 (508)
++++.|+|||+.+++. |+...++.+++++...+...+...+.. .+...+.+++|+|||++|+|||||+.++++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A 160 (475)
T cd07117 82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMID-EDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA 160 (475)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 9999999999999984 999999999999887765544332221 23345778999999999999999999999999999
Q ss_pred hhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhh
Q 010506 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (508)
Q Consensus 179 LaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (508)
|++||+||+|||+.+|.++..+++++ .+ ++|+|++|+|+| +.+.++.|+.|+++|.|+||||+.+|+.|++.++
T Consensus 161 L~aGN~VvlKPs~~~p~~~~~l~~~~----~~-~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa 235 (475)
T cd07117 161 LAAGNTVVIKPSSTTSLSLLELAKII----QD-VLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA 235 (475)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHH----HH-hCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999998876554 44 499999999998 6788999999999999999999999999999999
Q ss_pred hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCC
Q 010506 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337 (508)
Q Consensus 258 ~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~ 337 (508)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++
T Consensus 236 ~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~ 315 (475)
T cd07117 236 KKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDT 315 (475)
T ss_pred ccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHH
Q 010506 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEE 412 (508)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~e 412 (508)
++||+++..+++++.+++++++++|+++++||...+ .+|+|++|||+ ++++++++++||+||||++|++|+|.+|
T Consensus 316 ~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 395 (475)
T cd07117 316 QMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDE 395 (475)
T ss_pred cccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHH
Confidence 999999999999999999999999999999997633 36899999988 7899999999999999999999999999
Q ss_pred HHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 413 AVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 413 ai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
||+++|+++|||+++|||+|.+++.+++ .++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 396 ai~~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 472 (475)
T cd07117 396 VIDMANDSEYGLGGGVFTKDINRALRVA--RAVETGRVWVNTYNQ-IPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIY 472 (475)
T ss_pred HHHHHhCCCcCceEEEECCCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEE
Confidence 9999999999999999999999999999 789999999998543 4567899999999999999999999999999998
Q ss_pred EeC
Q 010506 493 INY 495 (508)
Q Consensus 493 ~~~ 495 (508)
+++
T Consensus 473 ~~~ 475 (475)
T cd07117 473 IDL 475 (475)
T ss_pred EeC
Confidence 753
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-97 Score=783.92 Aligned_cols=465 Identities=31% Similarity=0.525 Sum_probs=433.6
Q ss_pred CceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010506 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 22 ~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|+++.++|+
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLA 81 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5799999984 46789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHH
Q 010506 100 RLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (508)
Q Consensus 100 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 178 (508)
+++++|+|||+.+++ .|+...++.+++++...+...+...... .+...+..++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 160 (480)
T cd07559 82 VAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEID-EDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPA 160 (480)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 999999999999997 5999999999999988776554432221 23456778999999999999999999999999999
Q ss_pred hhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhh
Q 010506 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (508)
Q Consensus 179 LaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (508)
|++||+||+|||+.+|+++..++++ +.++ +|+|++|+|+| +.+.++.|++||+++.|+||||+.+|+.|++.++
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l----~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 235 (480)
T cd07559 161 LAAGNTVVLKPASQTPLSILVLMEL----IGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA 235 (480)
T ss_pred HHcCCEEEEECchhhhHHHHHHHHH----HHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 9999999999999999999887655 4553 99999999999 6788999999999999999999999999999999
Q ss_pred hccCceeeccCccCeEEEcCCC-----CHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCC
Q 010506 258 QRFGKCLLELSGNNAIIIMDDA-----DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (508)
Q Consensus 258 ~~~~~~~~elgG~~~~iV~~da-----Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p 332 (508)
++++|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 236 ~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p 315 (480)
T cd07559 236 ENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNP 315 (480)
T ss_pred ccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEe
Q 010506 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (508)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~ 407 (508)
.++++++||++++.+++++.+++++++++|+++++||...+ ..|+|++|||+ ++++++.++++|+||||++|++|
T Consensus 316 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~ 395 (480)
T cd07559 316 LDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITF 395 (480)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEee
Confidence 99999999999999999999999999999999999997643 36999999988 68889999999999999999999
Q ss_pred CCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhh
Q 010506 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487 (508)
Q Consensus 408 ~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~ 487 (508)
+|++|||+++|+++|||+++|||+|.+++.+++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+
T Consensus 396 ~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~~~ 472 (480)
T cd07559 396 KDEEEAIAIANDTEYGLGGGVWTRDINRALRVA--RGIQTGRVWVNCYHQ-YPAHAPFGGYKKSGIGRETHKMMLDHYQQ 472 (480)
T ss_pred CCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHH--HhcCcceEEECCCCC-CCCCCCcCCCccCcCCccChHHHHHHhhc
Confidence 999999999999999999999999999999999 789999999998543 44678999999999999999999999999
Q ss_pred eeEEEEeC
Q 010506 488 RSTCTINY 495 (508)
Q Consensus 488 ~k~v~~~~ 495 (508)
.|+++++|
T Consensus 473 ~k~v~~~~ 480 (480)
T cd07559 473 TKNILVSY 480 (480)
T ss_pred eEEEEEeC
Confidence 99999876
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-97 Score=782.44 Aligned_cols=479 Identities=27% Similarity=0.463 Sum_probs=437.9
Q ss_pred CceecCEEec-CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHH
Q 010506 22 GCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGR 100 (508)
Q Consensus 22 ~~~i~g~~~~-~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 100 (508)
++||||+|+. ++.+++++||+||+++++++.++.+++++++++|++|++.|+++|..+|.++|+++++.|+++.++|++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 81 (487)
T PRK09457 2 TLWINGDWIAGQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAE 81 (487)
T ss_pred CceECCEEecCCCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 4799999984 457899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhh
Q 010506 101 LLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180 (508)
Q Consensus 101 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 180 (508)
+++.|+|||..+++.|+..+++.+++++.......+.... ..++...+.+++|+|||++|+|||||+.++++++++||+
T Consensus 82 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 160 (487)
T PRK09457 82 VIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRS-EMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL 160 (487)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-cCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887765544333222 123445678899999999999999999999999999999
Q ss_pred cCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhc-
Q 010506 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR- 259 (508)
Q Consensus 181 aGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~- 259 (508)
+||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+|+.+.++.|+.||+++.|+||||+.+|+.|++.++.+
T Consensus 161 aGN~VvlKPs~~tp~t~~~l----~~l~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 236 (487)
T PRK09457 161 AGNTVVFKPSELTPWVAELT----VKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP 236 (487)
T ss_pred cCCEEEEECCCCCcHHHHHH----HHHHHHhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 99999999999999999876 4567889999999999999778899999999999999999999999999987755
Q ss_pred cCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccH-HHHHHHHHHhhhhcccCCCC-CCCC
Q 010506 260 FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY-QTVLDQLVDVYKQVKIGDPL-EKGT 337 (508)
Q Consensus 260 ~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~L~~~~~~~~~g~p~-~~~~ 337 (508)
.+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|+|. ++.+
T Consensus 237 ~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~ 316 (487)
T PRK09457 237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQP 316 (487)
T ss_pred CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCC
Confidence 467899999999999999999999999999999999999999999999999998 99999999999999999996 7889
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHh
Q 010506 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKIN 417 (508)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 417 (508)
++||+++.++++++.+++++++++|+++++||...+.+|+|++|||+++++++++++||+||||++|++|+|+||||+++
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~ 396 (487)
T PRK09457 317 FMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLA 396 (487)
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEeccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999988765556899999998888999999999999999999999999999999
Q ss_pred ccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeCCC
Q 010506 418 NSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGN 497 (508)
Q Consensus 418 n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~ 497 (508)
|+++|||+++|||+|.+.+++++ .++++|+|+||..+....+.+||||+|.||+|+++|..+ .+|++.|++++++..
T Consensus 397 N~~~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~~~ 473 (487)
T PRK09457 397 NNTRFGLSAGLLSDDREDYDQFL--LEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLESDS 473 (487)
T ss_pred hCCCCCceEEEEcCCHHHHHHHH--HhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEeccc
Confidence 99999999999999999999999 789999999998766555678999999999999999555 559999999999722
Q ss_pred ---CCCCccCCCCC
Q 010506 498 ---ELPLAQGINFG 508 (508)
Q Consensus 498 ---~~~~~~~~~~~ 508 (508)
..|+.|++.|.
T Consensus 474 ~~~~~~~~~~~~~~ 487 (487)
T PRK09457 474 LTLPATLSPGLDFS 487 (487)
T ss_pred ccCCCCcccCCCCC
Confidence 23789998873
|
|
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-97 Score=784.56 Aligned_cols=466 Identities=30% Similarity=0.531 Sum_probs=434.3
Q ss_pred CCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHH
Q 010506 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (508)
Q Consensus 21 ~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (508)
+++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 80 (488)
T TIGR02299 1 IGHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEI 80 (488)
T ss_pred CCccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 35799999984 4578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhh-hhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHH
Q 010506 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSR-QLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (508)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 177 (508)
++++++|+|||..+++.|+...++.+++++...+ ...+...+.. ....+..++|+|||++|+|||||+.+.++++++
T Consensus 81 ~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 158 (488)
T TIGR02299 81 AVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYPVD--THLNYTVRVPVGPVGLITPWNAPFMLSTWKIAP 158 (488)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCccccCC--CceEEEEEEecceEEEECCCccHHHHHHHHHHH
Confidence 9999999999999999999999999999988776 3333333221 234567889999999999999999999999999
Q ss_pred HhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHh
Q 010506 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (508)
Q Consensus 178 ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (508)
||++||+||+|||+.+|.++..+ .++|.++|+|+|++|+|+| +.+.++.|+.||++|.|+||||+.+|+.|++.+
T Consensus 159 ALaaGN~VIlKps~~~p~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 234 (488)
T TIGR02299 159 ALAFGNTVVLKPAEWSPLTAARL----AEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNG 234 (488)
T ss_pred HHHcCCEEEEECchhchHHHHHH----HHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999998765 6668899999999999998 677889999999999999999999999999999
Q ss_pred hhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCC
Q 010506 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (508)
Q Consensus 257 ~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 336 (508)
+++++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.+++
T Consensus 235 a~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~ 314 (488)
T TIGR02299 235 ADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPE 314 (488)
T ss_pred HhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-------CCCceeccEEE-ecCCCCcccccccccceeEeEEeC
Q 010506 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-------SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ 408 (508)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~-------~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~ 408 (508)
+++||+++.++++++.+++++++++|+++++||...+ .+|+|++|||+ ++++++.+++||+||||++|++|+
T Consensus 315 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~ 394 (488)
T TIGR02299 315 TEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFK 394 (488)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeC
Confidence 9999999999999999999999999999999997532 25899999988 788999999999999999999999
Q ss_pred CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhe
Q 010506 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRR 488 (508)
Q Consensus 409 ~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~ 488 (508)
|++|||+++|+++|||++||||+|.+.+++++ .++++|+|+||.... .++.+||||+|.||+|+++|.+++++|++.
T Consensus 395 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~ 471 (488)
T TIGR02299 395 DEEEAIEKANDTRYGLAGYVWTNDVGRAHRVA--LALEAGMIWVNSQNV-RHLPTPFGGVKASGIGREGGTYSFDFYTET 471 (488)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcCeEEECCCCC-CCCCCCCCCCccCcCCccchHHHHHHHhce
Confidence 99999999999999999999999999999999 889999999998654 456789999999999999999999999999
Q ss_pred eEEEEeC
Q 010506 489 STCTINY 495 (508)
Q Consensus 489 k~v~~~~ 495 (508)
|++++++
T Consensus 472 k~i~~~~ 478 (488)
T TIGR02299 472 KNVALAL 478 (488)
T ss_pred EEEEEec
Confidence 9999987
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-97 Score=781.50 Aligned_cols=469 Identities=30% Similarity=0.501 Sum_probs=437.2
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHh-----HHhccCChhHHHHHHHHHHHHHH
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEAS-----KIWMELPAPKRGEVVRQIGDALR 92 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~-----~~w~~~~~~~R~~~L~~~a~~l~ 92 (508)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|| +.|+.++.++|.++|+++++.|+
T Consensus 7 ~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~ 86 (503)
T PLN02467 7 RRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKIT 86 (503)
T ss_pred ccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHH
Confidence 446899999984 56789999999999999999999999999999999999 89999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCccc-CC--CCCceeEEEEeecceEEEEeCCCCchh
Q 010506 93 EKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP-SE--RPNHMMLETWNPLGVVGVITAFNFPCA 169 (508)
Q Consensus 93 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~ 169 (508)
+++++|++++++|+|||+.+++.|+...++.+++++...+.+.++... .. ......+.+++|+|||++|+|||||+.
T Consensus 87 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 166 (503)
T PLN02467 87 ERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLL 166 (503)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHH
Confidence 999999999999999999999999999999999999888776554311 11 112345778999999999999999999
Q ss_pred hhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHH
Q 010506 170 VLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKV 248 (508)
Q Consensus 170 ~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~ 248 (508)
+.++++++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||+++.|+||||+.+
T Consensus 167 ~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l----~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~ 242 (503)
T PLN02467 167 MATWKVAPALAAGCTAVLKPSELASVTCLEL----ADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTAT 242 (503)
T ss_pred HHHHHHHHHHHcCCEEEEECCCcCcHHHHHH----HHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHH
Confidence 9999999999999999999999999999876 4567899999999999999 6788999999999999999999999
Q ss_pred HHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcc
Q 010506 249 GLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328 (508)
Q Consensus 249 g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~ 328 (508)
|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 243 g~~v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 322 (503)
T PLN02467 243 GRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIK 322 (503)
T ss_pred HHHHHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceeccEEE-ecCCCCcccccccccceeEeE
Q 010506 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVM 405 (508)
Q Consensus 329 ~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~ 405 (508)
+|||.++++++||+++..+++++.+++++++.+|+++++||...+ ..|+|++|||+ ++++++.+++||+||||++|+
T Consensus 323 ~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~ 402 (503)
T PLN02467 323 ISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVK 402 (503)
T ss_pred CCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEE
Confidence 999999999999999999999999999999999999999997632 36899999987 788999999999999999999
Q ss_pred EeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHh
Q 010506 406 KFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQY 485 (508)
Q Consensus 406 ~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~ 485 (508)
+|+|.+|||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+... ....+||||+|.||+|+++|.+++++|
T Consensus 403 ~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~f 479 (503)
T PLN02467 403 TFSTEDEAIELANDSHYGLAGAVISNDLERCERVS--EAFQAGIVWINCSQP-CFCQAPWGGIKRSGFGRELGEWGLENY 479 (503)
T ss_pred eeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCcCCcccCcCCCcchHHHHHHh
Confidence 99999999999999999999999999999999999 789999999998643 445789999999999999999999999
Q ss_pred hheeEEEEeC
Q 010506 486 MRRSTCTINY 495 (508)
Q Consensus 486 ~~~k~v~~~~ 495 (508)
++.|++++.+
T Consensus 480 t~~k~i~~~~ 489 (503)
T PLN02467 480 LSVKQVTKYI 489 (503)
T ss_pred hCeEEEEEec
Confidence 9999999975
|
|
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-97 Score=779.44 Aligned_cols=467 Identities=28% Similarity=0.464 Sum_probs=435.5
Q ss_pred CCceecCEEec-CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010506 21 PGCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 21 ~~~~i~g~~~~-~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
.++||||+|+. ++.+++++||+||+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|++++++|+
T Consensus 3 ~~~~i~g~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 82 (475)
T PRK13473 3 TKLLINGELVAGEGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFA 82 (475)
T ss_pred ccceECCEEecCCCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999984 56789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHH
Q 010506 100 RLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (508)
Q Consensus 100 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 178 (508)
+++++|+|||..+++ .|+..+++.+++++...+.+.+...+....+...+..++|+|||++|+|||||+...++++++|
T Consensus 83 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~A 162 (475)
T PRK13473 83 RLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPA 162 (475)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHHHH
Confidence 999999999999986 4999999999999988777655433222223345678999999999999999999999999999
Q ss_pred hhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhh
Q 010506 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (508)
Q Consensus 179 LaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (508)
|++||+||+|||+.+|+++..+++ ++.++ +|+|++|+|+| +.+.+..|++|+++|.|+||||+++|+.|++.++
T Consensus 163 LaaGN~VIlKps~~~p~~~~~l~~----~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa 237 (475)
T PRK13473 163 LAAGNTVVLKPSEITPLTALKLAE----LAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAA 237 (475)
T ss_pred HhcCCEEEEECCCCChHHHHHHHH----HHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 999999999999999999987754 45677 99999999999 7889999999999999999999999999999999
Q ss_pred hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCC
Q 010506 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337 (508)
Q Consensus 258 ~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~ 337 (508)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++
T Consensus 238 ~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~ 317 (475)
T PRK13473 238 DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDT 317 (475)
T ss_pred hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHCC-CeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHH
Q 010506 338 LLGPLHTPESRKNFEKGIENIKSQG-GKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK 415 (508)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~g-a~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 415 (508)
++||+++..+++++.++++++.++| +++++||...+..|+|++|||+ ++++++.+++||+||||++|++|+|+||||+
T Consensus 318 ~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~ 397 (475)
T PRK13473 318 ELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVR 397 (475)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHH
Confidence 9999999999999999999999999 9999999864446899999988 6889999999999999999999999999999
Q ss_pred HhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010506 416 INNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 416 ~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
++|+++|||+++|||+|.+.+++++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+.|++++++
T Consensus 398 ~~N~~~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~ 474 (475)
T PRK13473 398 WANDSDYGLASSVWTRDVGRAHRVS--ARLQYGCTWVNTHFM-LVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKH 474 (475)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCCCCccccccCccchHHHHHHHhceEEEEEec
Confidence 9999999999999999999999999 789999999998654 3557899999999999999999999999999998865
|
|
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-96 Score=781.50 Aligned_cols=480 Identities=25% Similarity=0.390 Sum_probs=441.4
Q ss_pred hhhhhcCCCCCCCCceecCEEec-CCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHH
Q 010506 9 EFLSEIGLSPETPGCFVNGKWKA-HGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQ 86 (508)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~v~~P~~-g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~ 86 (508)
..|.|+..+...+++||||+|+. ++.+++++||.| |+++++++.++.+|+++++++|++|++.|+.+|..+|.++|++
T Consensus 20 ~~~~~~~~~~~~~~~~i~G~~~~~~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k 99 (533)
T TIGR01236 20 AELKELKSHPIEIPLVIGGEEVMGSGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLK 99 (533)
T ss_pred HHHHHHhhcCeeeceeECCEEecCCCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 67889999999999999999995 456899999997 8999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HhHHHHHHHHHHHhCCChhhhhhh-HHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeec-ceEEEEeC
Q 010506 87 IGDALR-EKLHHLGRLLSIEMGKILPEGIGE-VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPL-GVVGVITA 163 (508)
Q Consensus 87 ~a~~l~-~~~~~la~~~~~e~Gk~~~~a~~e-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p 163 (508)
+++.|+ +++++|+++++.|+||++.+++.+ +...++.+++++...+.+.+.......++...+..++|+ |||++|+|
T Consensus 100 ~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~P 179 (533)
T TIGR01236 100 AADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISP 179 (533)
T ss_pred HHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeC
Confidence 999999 599999999999999999999875 999999999999877766543321112334567789999 99999999
Q ss_pred CCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEE
Q 010506 164 FNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSF 242 (508)
Q Consensus 164 ~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~f 242 (508)
||||+....+++++|| +||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+| +.+.++.|+.||+++.|+|
T Consensus 180 wN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l----~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~F 254 (533)
T TIGR01236 180 FNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNYLT----MRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHF 254 (533)
T ss_pred CchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHHHH----HHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEE
Confidence 9999999999999999 89999999999999999876 5567899999999999998 6788999999999999999
Q ss_pred eCCHHHHHHHHHHhhhccCc------eeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHH
Q 010506 243 TGSTKVGLMVQQTVHQRFGK------CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316 (508)
Q Consensus 243 tGs~~~g~~i~~~a~~~~~~------~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f 316 (508)
|||+.+|+.|++.++++++| +++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|
T Consensus 255 TGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f 334 (533)
T TIGR01236 255 TGSTATFKHLWKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRF 334 (533)
T ss_pred ECCHHHHHHHHHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHH
Confidence 99999999999999998874 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCC--CeEeeCCcccCCCCceeccEEE-ecCCCCccc
Q 010506 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG--GKILTGGSVIESEGNFVQPTIV-EISPTADIV 393 (508)
Q Consensus 317 ~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~g--a~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~ 393 (508)
+++|+++++++++|+|.++++++||+++..+++++.+++++++++| +++++||...+..|+|++|||+ ++++++.++
T Consensus 335 ~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~ 414 (533)
T TIGR01236 335 KDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLM 414 (533)
T ss_pred HHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhh
Confidence 9999999999999999999999999999999999999999999987 7999999764446899999988 688999999
Q ss_pred ccccccceeEeEEeCC--HHHHHHHh-ccCCCCcEEEEecCCHHHHHHhhcccCcc--eeEEEEcCCCCCCC-CCCCccC
Q 010506 394 KEELFAPVLYVMKFQT--FEEAVKIN-NSVPQGLSSSIFTRSPENIFKWLGPHGSD--TGIVNVNIPTNGAE-IGGAFGG 467 (508)
Q Consensus 394 ~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~si~s~d~~~~~~~~~~~~~~--~g~V~iN~~~~~~~-~~~pfGG 467 (508)
+||+||||++|++|+| ++|||+++ |+++|||+++|||+|.+.+.+++ .+++ +|+|+||..+.... +.+||||
T Consensus 415 ~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~--~~l~~~~G~v~IN~~~~~~~~~~~PfGG 492 (533)
T TIGR01236 415 VEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEAD--KRLRFAAGNFYINDKPTGAVVGQQPFGG 492 (533)
T ss_pred cccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHH--HHhhhcCcEEEECCCCCCCCCCCCCCCC
Confidence 9999999999999998 59999999 88999999999999999999999 5655 99999998654443 5689999
Q ss_pred CCCCCCC-CcchHHHHHHhhheeEEEEeC
Q 010506 468 EKATGGG-REAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 468 ~~~SG~g-~~~g~~~~~~~~~~k~v~~~~ 495 (508)
+|.||+| +++|.+++++|+++|+++...
T Consensus 493 ~k~SG~G~~~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 493 ARGSGTNDKAGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred cccccCCcccCCHHHHHHhcceEEEEEEc
Confidence 9999998 999999999999999998876
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-96 Score=778.40 Aligned_cols=466 Identities=31% Similarity=0.536 Sum_probs=434.0
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH---HhccCChhHHHHHHHHHHHHHHHh
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK---IWMELPAPKRGEVVRQIGDALREK 94 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
++++||||+|+. ++.+++++||+||+++++++.++.+++++++++|++|++ .|+.+|.++|.++|+++++.|+++
T Consensus 6 ~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 85 (481)
T cd07141 6 YTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERD 85 (481)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHh
Confidence 456799999984 567899999999999999999999999999999999998 699999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhh-hhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHH
Q 010506 95 LHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 173 (508)
.++|++++++|+|||..++ ..|+...++.+++++...+...+...+.. .....+..++|+|||++|+|||||+.+.++
T Consensus 86 ~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 164 (481)
T cd07141 86 RAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMD-GDFFTYTRHEPVGVCGQIIPWNFPLLMAAW 164 (481)
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEeceeEEEEEccChhHHHHHHH
Confidence 9999999999999999766 46999999999999988777655433322 233456789999999999999999999999
Q ss_pred HHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHH
Q 010506 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (508)
Q Consensus 174 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (508)
++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||++|.|+||||+.+|+.|
T Consensus 165 ~~~~ALaaGN~VVlKps~~~p~~~~~l----~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i 240 (481)
T cd07141 165 KLAPALACGNTVVLKPAEQTPLTALYL----ASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLI 240 (481)
T ss_pred HHHHHHHcCCEEEEeCCCCCcHHHHHH----HHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 999999999999999999999999876 5567899999999999998 66788999999999999999999999999
Q ss_pred HHHhhh-ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCC
Q 010506 253 QQTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (508)
Q Consensus 253 ~~~a~~-~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 331 (508)
++.++. +++|+++|+|||||+||++|||++.|++.|++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 241 ~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~ 320 (481)
T cd07141 241 QQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGN 320 (481)
T ss_pred HHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCC
Confidence 999887 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCH
Q 010506 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
|+++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ ++++++++++||+||||++|++|+|+
T Consensus 321 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 400 (481)
T cd07141 321 PFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTI 400 (481)
T ss_pred CCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCH
Confidence 99999999999999999999999999999999999999875557999999987 78899999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeE
Q 010506 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~ 490 (508)
+|||+++|+++|||++||||+|.+++.+++ .++++|+|+||++. ..++.+||||+|.||+|+++|.+++++||+.|+
T Consensus 401 ~eai~~~n~~~~gLs~~vft~d~~~a~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~ 477 (481)
T cd07141 401 DEVIERANNTTYGLAAAVFTKDIDKAITFS--NALRAGTVWVNCYN-VVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKT 477 (481)
T ss_pred HHHHHHHhCCCccceEEEECCCHHHHHHHH--HhcCcCeEEECCCC-CCCCCCCCCCcccCcCCccchHHHHHHHhheEE
Confidence 999999999999999999999999999999 78999999999864 355678999999999999999999999999999
Q ss_pred EEE
Q 010506 491 CTI 493 (508)
Q Consensus 491 v~~ 493 (508)
+++
T Consensus 478 v~~ 480 (481)
T cd07141 478 VTI 480 (481)
T ss_pred EEE
Confidence 876
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-96 Score=773.90 Aligned_cols=469 Identities=30% Similarity=0.510 Sum_probs=434.1
Q ss_pred CCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH-Hhc-cCChhHHHHHHHHHHHHHHHh
Q 010506 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-IWM-ELPAPKRGEVVRQIGDALREK 94 (508)
Q Consensus 19 ~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~-~w~-~~~~~~R~~~L~~~a~~l~~~ 94 (508)
..+++||||+|+. ++.++.++||+||+++++++.++.+|+++++++|++||+ .|+ .+|.++|.++|+++++.|+++
T Consensus 5 ~~~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~ 84 (481)
T cd07143 5 QPTGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERN 84 (481)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHh
Confidence 3457899999984 457899999999999999999999999999999999998 599 999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhh-hhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHH
Q 010506 95 LHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 173 (508)
+++|++++++|+|||..++ +.|+..+++.+++++.+.+...+...... .+...+..++|+|||++|+|||||+.+.++
T Consensus 85 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~ 163 (481)
T cd07143 85 LDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETD-IKKLTYTRHEPIGVCGQIIPWNFPLLMCAW 163 (481)
T ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEecceeEEEECCCcChHHHHHH
Confidence 9999999999999999765 46999999999999988876654433222 334556789999999999999999999999
Q ss_pred HHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHH
Q 010506 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (508)
Q Consensus 174 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (508)
++++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||++|.|+||||+.+|+.|
T Consensus 164 ~~~~ALaaGN~VvlKps~~~p~~~~~l----~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i 239 (481)
T cd07143 164 KIAPALAAGNTIVLKPSELTPLSALYM----TKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKV 239 (481)
T ss_pred HHHHHHHcCCEEEEeCCCCCcHHHHHH----HHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHH
Confidence 999999999999999999999998866 5567899999999999998 66789999999999999999999999999
Q ss_pred HHHhhh-ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCC
Q 010506 253 QQTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (508)
Q Consensus 253 ~~~a~~-~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 331 (508)
++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+
T Consensus 240 ~~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~ 319 (481)
T cd07143 240 MEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGD 319 (481)
T ss_pred HHHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCC
Confidence 999885 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCH
Q 010506 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
|.++++++||+++..+++++.+++++++.+|+++++||......|+|++|||+ ++++++.+++||+||||++|++|+|+
T Consensus 320 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 399 (481)
T cd07143 320 PFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTE 399 (481)
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCH
Confidence 99999999999999999999999999999999999999874457899999988 78999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeE
Q 010506 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~ 490 (508)
+|||+++|+++|||++||||+|.+.+.+++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 400 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~ 476 (481)
T cd07143 400 EEAIKRANDSTYGLAAAVFTNNINNAIRVA--NALKAGTVWVNCYNL-LHHQVPFGGYKQSGIGRELGEYALENYTQIKA 476 (481)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHH--HhcCcCeEEECCCCC-CCCCCCCCCccccccCcccHHHHHHHHhCeEE
Confidence 999999999999999999999999999999 789999999998654 45678999999999999999999999999999
Q ss_pred EEEeC
Q 010506 491 CTINY 495 (508)
Q Consensus 491 v~~~~ 495 (508)
+++++
T Consensus 477 i~~~~ 481 (481)
T cd07143 477 VHINL 481 (481)
T ss_pred EEEeC
Confidence 98753
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-96 Score=780.46 Aligned_cols=479 Identities=24% Similarity=0.379 Sum_probs=436.3
Q ss_pred hhhhhcCCCCCCCCceecCEEecCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHH
Q 010506 9 EFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQI 87 (508)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~ 87 (508)
++|+.+......+.+||||+|+.++.+++++||+| |+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++
T Consensus 21 ~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~ 100 (522)
T cd07123 21 EALAELKSLTVEIPLVIGGKEVRTGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKA 100 (522)
T ss_pred HHHHHHhhhccccCeeECCEEcCCCCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 46666555556788999999997778999999995 99999999999999999999999999999999999999999999
Q ss_pred HHHHHH-hHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeec-ceEEEEeCC
Q 010506 88 GDALRE-KLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPL-GVVGVITAF 164 (508)
Q Consensus 88 a~~l~~-~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~ 164 (508)
++.|++ ++++|+++++.|+|||+.++. .++...++.+++++...+...+.......++...+..++|+ |||++|+||
T Consensus 101 a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~Pw 180 (522)
T cd07123 101 ADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPF 180 (522)
T ss_pred HHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCc
Confidence 999996 899999999999999999986 48888999999998877665443322222234567789998 999999999
Q ss_pred CCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEe
Q 010506 165 NFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFT 243 (508)
Q Consensus 165 n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ft 243 (508)
|||+....+++++|| +||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+| +.+.++.|+.||+++.|+||
T Consensus 181 NfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l----~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FT 255 (522)
T cd07123 181 NFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLV----YKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFT 255 (522)
T ss_pred ccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHHHH----HHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEE
Confidence 999999999999999 69999999999999999876 5667899999999999999 66789999999999999999
Q ss_pred CCHHHHHHHHHHhhhccC------ceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHH
Q 010506 244 GSTKVGLMVQQTVHQRFG------KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317 (508)
Q Consensus 244 Gs~~~g~~i~~~a~~~~~------~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~ 317 (508)
||+++|+.|++.++++++ ++++|+|||||+||++|||++.|++.|++|+|.|+||.|++++|||||+++||+|+
T Consensus 256 GS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~ 335 (522)
T cd07123 256 GSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVK 335 (522)
T ss_pred CCHHHHHHHHHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHH
Confidence 999999999999998887 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHC-CCeEeeCCcccCCCCceeccEEE-ecCCCCccccc
Q 010506 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQ-GGKILTGGSVIESEGNFVQPTIV-EISPTADIVKE 395 (508)
Q Consensus 318 ~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~-ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~ 395 (508)
++|+++++++++|+|.|+++++||+++..+++++.++++++.++ |+++++||...+.+|+|++|||+ ++++++.+++|
T Consensus 336 ~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~e 415 (522)
T cd07123 336 ERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTE 415 (522)
T ss_pred HHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhc
Confidence 99999999999999999999999999999999999999999999 99999999764346899999988 68999999999
Q ss_pred ccccceeEeEEeCC--HHHHHHHhccCC-CCcEEEEecCCHHHHHHhhcccC--cceeEEEEcCCCCCC-CCCCCccCCC
Q 010506 396 ELFAPVLYVMKFQT--FEEAVKINNSVP-QGLSSSIFTRSPENIFKWLGPHG--SDTGIVNVNIPTNGA-EIGGAFGGEK 469 (508)
Q Consensus 396 E~fgPvl~v~~~~~--~~eai~~~n~~~-~gl~~si~s~d~~~~~~~~~~~~--~~~g~V~iN~~~~~~-~~~~pfGG~~ 469 (508)
|+||||++|++|+| ++|||+++|++. |||++||||+|.+.+++++ .+ +++|+|+||+.+... .+.+||||+|
T Consensus 416 EiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~--~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k 493 (522)
T cd07123 416 EIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREAT--DALRNAAGNFYINDKPTGAVVGQQPFGGAR 493 (522)
T ss_pred CCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHH--HhhhhcCcEEEECCCCCCCCCCCCCCCcch
Confidence 99999999999984 799999999985 9999999999999999998 55 469999999865443 3468999999
Q ss_pred CCCCC-CcchHHHHHHhhheeEEEEe
Q 010506 470 ATGGG-REAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 470 ~SG~g-~~~g~~~~~~~~~~k~v~~~ 494 (508)
.||+| +++|.+++++|++.|+++..
T Consensus 494 ~SG~gg~~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 494 ASGTNDKAGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred hcCCCcccCCHHHHHHhcceEEEEEe
Confidence 99996 99999999999999999775
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-96 Score=770.83 Aligned_cols=455 Identities=26% Similarity=0.443 Sum_probs=422.3
Q ss_pred CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChh
Q 010506 32 HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP 111 (508)
Q Consensus 32 ~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 111 (508)
..++++++||+||+++++++.++.+++++++++|++|++.|++++..+|.++|+++++.|+++.++|+++++.|+|||+.
T Consensus 5 ~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T PRK13968 5 PATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPIN 84 (462)
T ss_pred CCCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHH
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCC
Q 010506 112 EGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (508)
Q Consensus 112 ~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 191 (508)
+++.|+...++.+++++...+........ ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 85 ~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~ 163 (462)
T PRK13968 85 QARAEVAKSANLCDWYAEHGPAMLKAEPT-LVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAP 163 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCccc-cCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999999999999998876654332111 12334567889999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccC
Q 010506 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271 (508)
Q Consensus 192 ~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~ 271 (508)
.+|+++..+ .+++.++|+|+|++|+|+|+.+....|+.||++|.|+||||+.+|+.|++.++++++|+++|+||||
T Consensus 164 ~tp~~~~~l----~~~~~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~ 239 (462)
T PRK13968 164 NVMGCAQLI----AQVFKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSD 239 (462)
T ss_pred cChHHHHHH----HHHHHHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCC
Confidence 999998765 6678899999999999998434455688999999999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHH
Q 010506 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351 (508)
Q Consensus 272 ~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 351 (508)
|+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 240 p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~ 319 (462)
T PRK13968 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDEL 319 (462)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEec
Q 010506 352 EKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (508)
Q Consensus 352 ~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s 430 (508)
.+++++++.+|+++++||...+..|+|++|||+ ++++++.+++||+||||++|++|+|++|||+++|+++|||+++|||
T Consensus 320 ~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t 399 (462)
T PRK13968 320 HHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFT 399 (462)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEc
Confidence 999999999999999999764446899999987 6889999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEe
Q 010506 431 RSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 431 ~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 494 (508)
+|.+.+++++ .++++|+|+||+.. ..++.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 400 ~d~~~a~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 400 TDETQARQMA--ARLECGGVFINGYC-ASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred CCHHHHHHHH--HhCCcceEEECCCC-CCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence 9999999999 78999999999864 3456789999999999999999999999999999875
|
|
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-96 Score=780.37 Aligned_cols=470 Identities=33% Similarity=0.560 Sum_probs=438.4
Q ss_pred CCCCCceecCEEecCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHH
Q 010506 18 PETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 18 ~~~~~~~i~g~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
.+.+++||||+|+.++.+++++||+| |+++++++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|+++++
T Consensus 30 ~~~~~~~i~g~~~~~~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 109 (512)
T cd07124 30 GREYPLVIGGKEVRTEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRF 109 (512)
T ss_pred ccccceeECCEEecCCCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence 56789999999997778899999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHH
Q 010506 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 176 (508)
+|++++++|+|||+.+++.|+...++.+++++...+...+...+. .++...+..++|+|||++|+|||||+.+.+++++
T Consensus 110 ~la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~ 188 (512)
T cd07124 110 ELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEM-VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTT 188 (512)
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence 999999999999999999999999999999998887664443322 2334567889999999999999999999999999
Q ss_pred HHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHH
Q 010506 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (508)
Q Consensus 177 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (508)
+||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.+..|+.||++|.|+||||+.+|+.|++.
T Consensus 189 ~ALaaGN~VVlKPs~~tp~~~~~l----~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~ 264 (512)
T cd07124 189 AALVTGNTVVLKPAEDTPVIAAKL----VEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYER 264 (512)
T ss_pred HHHHcCCEEEEECCccccHHHHHH----HHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHH
Confidence 999999999999999999999876 5567899999999999998 67789999999999999999999999999999
Q ss_pred hhh------ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhccc
Q 010506 256 VHQ------RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329 (508)
Q Consensus 256 a~~------~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~ 329 (508)
+++ +++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 265 aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~ 344 (512)
T cd07124 265 AAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKV 344 (512)
T ss_pred HhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence 887 68999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC--CCceeccEEE-ecCCCCcccccccccceeEeEE
Q 010506 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES--EGNFVQPTIV-EISPTADIVKEELFAPVLYVMK 406 (508)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~--~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~ 406 (508)
|+|.|+++++||+++..+++++.++++++.+ |+++++||...+. +|+|++|||+ ++++++.+++||+||||++|++
T Consensus 345 g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~ 423 (512)
T cd07124 345 GDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIK 423 (512)
T ss_pred CCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEe
Confidence 9999999999999999999999999999988 8999999986432 6999999987 6889999999999999999999
Q ss_pred eCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCC-CCCCCccCCCCCCCC-CcchHHHHHH
Q 010506 407 FQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGA-EIGGAFGGEKATGGG-REAGSDSWKQ 484 (508)
Q Consensus 407 ~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfGG~~~SG~g-~~~g~~~~~~ 484 (508)
|+|++|||+++|+++|||+++|||+|.+.+++++ .++++|+|+||..+... .+.+||||+|.||+| +.+|.+++++
T Consensus 424 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~ 501 (512)
T cd07124 424 AKDFDEALEIANDTEYGLTGGVFSRSPEHLERAR--REFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQ 501 (512)
T ss_pred cCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH--HhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHH
Confidence 9999999999999999999999999999999999 88999999999865433 346899999999999 7889999999
Q ss_pred hhheeEEEEeC
Q 010506 485 YMRRSTCTINY 495 (508)
Q Consensus 485 ~~~~k~v~~~~ 495 (508)
||+.|+++++|
T Consensus 502 ~t~~k~v~~~~ 512 (512)
T cd07124 502 FMQPKTVTENF 512 (512)
T ss_pred hccEEEEEEeC
Confidence 99999998875
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-96 Score=774.44 Aligned_cols=465 Identities=30% Similarity=0.480 Sum_probs=428.3
Q ss_pred CCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHH
Q 010506 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (508)
Q Consensus 21 ~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (508)
+++||||+|+. ++.+++++||+||+++++++.++.+|++.++++|++|++.|+.+|.++|.++|+++++.|+++.++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 80 (479)
T cd07116 1 YDNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEML 80 (479)
T ss_pred CCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46799999983 4678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHH
Q 010506 99 GRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (508)
Q Consensus 99 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 177 (508)
+++++.|+|||+.+++ .|+...++.+++++...+...+...+. ..+...+..++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 81 AVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEI-DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecC-CCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 9999999999999997 599999999999998776654433222 22334577899999999999999999999999999
Q ss_pred HhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHh
Q 010506 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (508)
Q Consensus 178 ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (508)
||++||+||+|||+.+|+++..+++++ .++ +|+|++|+|+| +.+.+..|+.||+|+.|+||||+.+|+.|++.+
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~----~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a 234 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELI----GDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYA 234 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHH----HHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999998876654 455 99999999998 778899999999999999999999999999999
Q ss_pred hhccCceeeccCccCeEEEcCC------CCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccC
Q 010506 257 HQRFGKCLLELSGNNAIIIMDD------ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (508)
Q Consensus 257 ~~~~~~~~~elgG~~~~iV~~d------aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g 330 (508)
+++++|+++|+|||||+||++| ||++.|++.++++. +|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 235 a~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G 313 (479)
T cd07116 235 SENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQG 313 (479)
T ss_pred HcCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999987 79999999999865 6999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceeccEEEecCCCCcccccccccceeEeEE
Q 010506 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIVEISPTADIVKEELFAPVLYVMK 406 (508)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~ 406 (508)
+|.++++.+||+++..+++++++++++++++|+++++||...+ .+|+|+.|||+...+++.+++||+||||++|++
T Consensus 314 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~eE~FGPVl~v~~ 393 (479)
T cd07116 314 NPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGNKMRIFQEEIFGPVLAVTT 393 (479)
T ss_pred CCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCCCChhhhcCCcCceEEEEE
Confidence 9999999999999999999999999999999999999997632 368999999885335899999999999999999
Q ss_pred eCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhh
Q 010506 407 FQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486 (508)
Q Consensus 407 ~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~ 486 (508)
|+|++|||+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ....+||||+|.||+|+++|.+++++|+
T Consensus 394 ~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~~~ 470 (479)
T cd07116 394 FKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMG--RGIQAGRVWTNCYHL-YPAHAAFGGYKQSGIGRENHKMMLDHYQ 470 (479)
T ss_pred eCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHH--HhcCcCeEEECCCCC-CCCCCCcCCCccCcCCccChHHHHHHhh
Confidence 9999999999999999999999999999999999 889999999998654 4457899999999999999999999999
Q ss_pred heeEEEEeC
Q 010506 487 RRSTCTINY 495 (508)
Q Consensus 487 ~~k~v~~~~ 495 (508)
+.|+++++|
T Consensus 471 ~~k~~~~~~ 479 (479)
T cd07116 471 QTKNLLVSY 479 (479)
T ss_pred ceEEEEEeC
Confidence 999998875
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-96 Score=775.39 Aligned_cols=472 Identities=30% Similarity=0.564 Sum_probs=436.6
Q ss_pred CCCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH-hccCChhHHHHHHHHHHHHHH
Q 010506 16 LSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI-WMELPAPKRGEVVRQIGDALR 92 (508)
Q Consensus 16 ~~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~ 92 (508)
+-++..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++. |+.+|.++|.++|+++++.|+
T Consensus 3 ~~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~ 82 (484)
T cd07144 3 SYDQPTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVE 82 (484)
T ss_pred eeecCcCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHH
Confidence 3456678999999984 4578999999999999999999999999999999999996 889999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCChhhh-hhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhh
Q 010506 93 EKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVL 171 (508)
Q Consensus 93 ~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 171 (508)
+++++|++++++|+|||..++ ..|+..+++.+++++.+.+...+...+.. .+...+..++|+|||++|+|||||+.+.
T Consensus 83 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~ 161 (484)
T cd07144 83 KNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTS-PNKLAYTLHEPYGVCGQIIPWNYPLAMA 161 (484)
T ss_pred HhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEecceEEEEECcCCCHHHHH
Confidence 999999999999999998765 57999999999999988777655433322 3344577899999999999999999999
Q ss_pred HHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHH
Q 010506 172 GWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGL 250 (508)
Q Consensus 172 ~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~ 250 (508)
++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||++|.|+||||+.+|+
T Consensus 162 ~~~~~~ALaaGN~VV~Kps~~~p~~~~~l----~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~ 237 (484)
T cd07144 162 AWKLAPALAAGNTVVIKPAENTPLSLLYF----ANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGR 237 (484)
T ss_pred HHHHHHHHHcCCEEEEECCccchHHHHHH----HHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHH
Confidence 99999999999999999999999999876 5567899999999999998 778899999999999999999999999
Q ss_pred HHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhh-ccc
Q 010506 251 MVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ-VKI 329 (508)
Q Consensus 251 ~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~-~~~ 329 (508)
.|++.++++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|+++++||||+++||+|+++|++++++ +++
T Consensus 238 ~i~~~a~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~ 317 (484)
T cd07144 238 LVMKAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKV 317 (484)
T ss_pred HHHHHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999985 899
Q ss_pred CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceeccEEE-ecCCCCcccccccccceeEeE
Q 010506 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---SEGNFVQPTIV-EISPTADIVKEELFAPVLYVM 405 (508)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~---~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~ 405 (508)
|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+ ++++++.+++||+||||++|+
T Consensus 318 G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~ 397 (484)
T cd07144 318 GSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVIS 397 (484)
T ss_pred CCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEe
Confidence 99999999999999999999999999999999999999997633 36899999987 688999999999999999999
Q ss_pred EeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHh
Q 010506 406 KFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQY 485 (508)
Q Consensus 406 ~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~ 485 (508)
+|+|++|||+++|+++|||+++|||+|.+.+.+++ .++++|+|+||+.+. .++.+||||+|.||+|+++|.+++++|
T Consensus 398 ~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~~ 474 (484)
T cd07144 398 KFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVA--RELEAGMVWINSSND-SDVGVPFGGFKMSGIGRELGEYGLETY 474 (484)
T ss_pred ccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH--HhcCcCEEEECCCCC-CCCCCCcCCcccCcCCCCchHHHHHHh
Confidence 99999999999999999999999999999999999 789999999998653 456789999999999999999999999
Q ss_pred hheeEEEEeC
Q 010506 486 MRRSTCTINY 495 (508)
Q Consensus 486 ~~~k~v~~~~ 495 (508)
|+.|++++++
T Consensus 475 t~~k~v~~~~ 484 (484)
T cd07144 475 TQTKAVHINL 484 (484)
T ss_pred hceEEEEEeC
Confidence 9999998753
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-96 Score=776.76 Aligned_cols=471 Identities=29% Similarity=0.540 Sum_probs=435.6
Q ss_pred CCCCCceecCEEecCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHH
Q 010506 18 PETPGCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 18 ~~~~~~~i~g~~~~~~~~~~v~~P~-~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
..++++||||+|+.++.++.++||+ |++++++++.++.+|++.++++|++|++.|+.+|.++|.++|+++++.|+++++
T Consensus 30 ~~~~~~~i~g~~~~~~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 109 (511)
T TIGR01237 30 GKTYPLYINGEYVETENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRH 109 (511)
T ss_pred ccccceeECCEEecCCCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence 4567889999999777789999999 599999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHH
Q 010506 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 176 (508)
+|++++++|+|||+.+++.|+...++.+++++...+...+...+...++...+..++|+|||++|+|||||+.+++++++
T Consensus 110 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~ 189 (511)
T TIGR01237 110 ELNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTV 189 (511)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999887766543322222344567789999999999999999999999999
Q ss_pred HHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHH
Q 010506 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (508)
Q Consensus 177 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (508)
+||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||+++.|.||||+.+|+.|++.
T Consensus 190 ~ALaaGN~VVlKPs~~tp~~~~~l----~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 265 (511)
T TIGR01237 190 APIVTGNCVVLKPAETSTVIAAKI----VEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYED 265 (511)
T ss_pred HHHHcCCEEEEECCCCCcHHHHHH----HHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHH
Confidence 999999999999999999999876 4567889999999999999 67899999999999999999999999999998
Q ss_pred hh------hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhccc
Q 010506 256 VH------QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329 (508)
Q Consensus 256 a~------~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~ 329 (508)
++ ++++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++||+|+++|+++++++++
T Consensus 266 aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 266 AAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNV 345 (511)
T ss_pred HhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCC
Confidence 87 588999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeC
Q 010506 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ 408 (508)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~ 408 (508)
|+|.++++++||+++..+++++.+++++++++| ++++||......|+|++|||+ ++++++++++||+||||++|++|+
T Consensus 346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~ 424 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAA 424 (511)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeC
Confidence 999999999999999999999999999999888 889998754446899999988 789999999999999999999999
Q ss_pred CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCC-CCCCccCCCCCCCCC-cchHHHHHHhh
Q 010506 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAE-IGGAFGGEKATGGGR-EAGSDSWKQYM 486 (508)
Q Consensus 409 ~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~-~~~pfGG~~~SG~g~-~~g~~~~~~~~ 486 (508)
|++|||+++|+++|||++||||+|.+.+++++ .++++|+|+||+.+.... +.+||||+|.||+|+ .+|.+++++||
T Consensus 425 ~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~ 502 (511)
T TIGR01237 425 DFDEALEIANGTEYGLTGGVYSNTRDHIERAA--AEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFM 502 (511)
T ss_pred CHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH--HhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhc
Confidence 99999999999999999999999999999999 789999999998754433 358999999999995 68999999999
Q ss_pred heeEEEEeC
Q 010506 487 RRSTCTINY 495 (508)
Q Consensus 487 ~~k~v~~~~ 495 (508)
+.|+++.++
T Consensus 503 ~~k~v~~~~ 511 (511)
T TIGR01237 503 QPKTVTENI 511 (511)
T ss_pred ceEEEEEeC
Confidence 999998764
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-95 Score=772.33 Aligned_cols=468 Identities=38% Similarity=0.680 Sum_probs=436.0
Q ss_pred ceecCEEec--CCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010506 23 CFVNGKWKA--HGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 23 ~~i~g~~~~--~~~~~~v~~P~~-g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
+||||+|+. ++.+++++||+| ++++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela 80 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA 80 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 489999983 468899999999 57999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHh
Q 010506 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (508)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 179 (508)
+++++|+|||..+++.|+...++.+++++...+.+.+...+...++...+.+++|+|||++|+|||||+.+.++++++||
T Consensus 81 ~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 160 (478)
T cd07131 81 RLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPAL 160 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999998887766554433322334567889999999999999999999999999999
Q ss_pred hcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhh
Q 010506 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258 (508)
Q Consensus 180 aaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~ 258 (508)
++||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+| +.+.+..|+.||++|.|+||||+.+|+.|++.+++
T Consensus 161 aaGN~VvlKps~~~p~~~~~l----~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~ 236 (478)
T cd07131 161 VCGNTVVFKPAEDTPACALKL----VELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCAR 236 (478)
T ss_pred HcCCEEEEECCCcCcHHHHHH----HHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 999999999999999999876 5567899999999999998 66689999999999999999999999999999999
Q ss_pred ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCc
Q 010506 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTL 338 (508)
Q Consensus 259 ~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~ 338 (508)
+++|+++|+|||||+||++|||++.|++.|++++|+|+||.|+++++||||+++||+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 316 (478)
T cd07131 237 PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETD 316 (478)
T ss_pred cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHH
Q 010506 339 LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (508)
Q Consensus 339 ~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 413 (508)
+||+++..+++++.+++++++++|+++++||...+ .+|+|++|||+ +++++++++++|+||||++|++|+|++||
T Consensus 317 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~ea 396 (478)
T cd07131 317 MGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEA 396 (478)
T ss_pred CCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHH
Confidence 99999999999999999999999999999997643 36899999988 68889999999999999999999999999
Q ss_pred HHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC-CcchHHHHHHhhheeEEE
Q 010506 414 VKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG-REAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 414 i~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g-~~~g~~~~~~~~~~k~v~ 492 (508)
|+++|+++|||+++|||+|.+++++++ .++++|+|+||.++....+.+||||+|.||+| +++|.+++++||+.|+|+
T Consensus 397 i~~~n~~~~gL~~~v~t~d~~~a~~~~--~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~ 474 (478)
T cd07131 397 IEIANDTEYGLSSAIYTEDVNKAFRAR--RDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVY 474 (478)
T ss_pred HHHHhCCCCcceEEEEcCCHHHHHHHH--HhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEE
Confidence 999999999999999999999999999 78999999999976655668999999999999 788999999999999999
Q ss_pred EeCC
Q 010506 493 INYG 496 (508)
Q Consensus 493 ~~~~ 496 (508)
++++
T Consensus 475 ~~~~ 478 (478)
T cd07131 475 VDYS 478 (478)
T ss_pred EeCC
Confidence 8753
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-96 Score=769.56 Aligned_cols=466 Identities=30% Similarity=0.530 Sum_probs=436.4
Q ss_pred hhhhhhhcCCCCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHH
Q 010506 7 EYEFLSEIGLSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVV 84 (508)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L 84 (508)
..-.++|+..+++++++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L 87 (480)
T cd07111 8 AACALAWLDAHDRSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHL 87 (480)
T ss_pred HHHHHHHhhhccccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 4457899999999999999999984 45789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeC
Q 010506 85 RQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITA 163 (508)
Q Consensus 85 ~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 163 (508)
+++++.|+++.++|++++++|+|||+.+++ .|+...++.+++++.+.+...+ ....++|+|||++|+|
T Consensus 88 ~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~-----------~~~~~~P~GVV~~I~P 156 (480)
T cd07111 88 YRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT-----------ELAGWKPVGVVGQIVP 156 (480)
T ss_pred HHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CcccceecceEEEECC
Confidence 999999999999999999999999999998 4999999988888776654321 1235789999999999
Q ss_pred CCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEe
Q 010506 164 FNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFT 243 (508)
Q Consensus 164 ~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ft 243 (508)
||||+.+.++++++||++||+||+|||+.+|.++..+ .++++++|+|+|++|+|+|+.+.+..|+.||++|.|+||
T Consensus 157 wN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ft 232 (480)
T cd07111 157 WNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLF----AEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFT 232 (480)
T ss_pred CccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHH----HHHHHhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEE
Confidence 9999999999999999999999999999999999876 556889999999999999866789999999999999999
Q ss_pred CCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHh
Q 010506 244 GSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323 (508)
Q Consensus 244 Gs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~ 323 (508)
||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++
T Consensus 233 Gs~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~ 312 (480)
T cd07111 233 GSTEVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKER 312 (480)
T ss_pred CCHHHHHHHHHHHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCccccccccccee
Q 010506 324 YKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVL 402 (508)
Q Consensus 324 ~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl 402 (508)
++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ ++++++.+++||+||||+
T Consensus 313 ~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl 392 (480)
T cd07111 313 MSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVL 392 (480)
T ss_pred HHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCee
Confidence 9999999999999999999999999999999999999999999998754457999999988 688999999999999999
Q ss_pred EeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHH
Q 010506 403 YVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW 482 (508)
Q Consensus 403 ~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~ 482 (508)
+|++|+|++|||+++|+++|||+++|||+|.+.+.+++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+++
T Consensus 393 ~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~--~~l~aG~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~~ 469 (480)
T cd07111 393 VVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVA--LSLKAGVVWINGHNL-FDAAAGFGGYRESGFGREGGKEGL 469 (480)
T ss_pred EeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCEeeEEECCCCC-CCCCCCcCCcccccCCccchHHHH
Confidence 99999999999999999999999999999999999998 789999999998654 455689999999999999999999
Q ss_pred HHhhheeE
Q 010506 483 KQYMRRST 490 (508)
Q Consensus 483 ~~~~~~k~ 490 (508)
++||+.|+
T Consensus 470 ~~~~~~k~ 477 (480)
T cd07111 470 YEYLRPSW 477 (480)
T ss_pred HHHhhccC
Confidence 99999985
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-95 Score=770.19 Aligned_cols=477 Identities=29% Similarity=0.465 Sum_probs=435.1
Q ss_pred ceecCEEec-CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHH
Q 010506 23 CFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRL 101 (508)
Q Consensus 23 ~~i~g~~~~-~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 101 (508)
+||+|+|+. ++++++++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|+++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~ 80 (484)
T TIGR03240 1 LFIDGKWRAGQGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARV 80 (484)
T ss_pred CeECCEEecCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 489999984 4678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhc
Q 010506 102 LSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVC 181 (508)
Q Consensus 102 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaa 181 (508)
++.|+|||..+++.|+..+++.+++++...+...+..... .++...+..++|+|||++|+|||||+.+.++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaa 159 (484)
T TIGR03240 81 IARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENP-MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLA 159 (484)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHc
Confidence 9999999999999999999999998776655544433211 123456778899999999999999999999999999999
Q ss_pred CCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhc-c
Q 010506 182 GNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR-F 260 (508)
Q Consensus 182 GN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~-~ 260 (508)
||+||+|||+.+|+++..++ +++.++|+|+|++|+|+|+.+.++.|+.||++|.|+||||+++|+.|++.++++ .
T Consensus 160 GN~VVlKPs~~tp~t~~~l~----~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~ 235 (484)
T TIGR03240 160 GNTVVFKPSELTPWVAEETV----KLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE 235 (484)
T ss_pred CCEEEEECCccccHHHHHHH----HHHHHhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCC
Confidence 99999999999999998764 557789999999999999778899999999999999999999999999987765 5
Q ss_pred CceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccH-HHHHHHHHHhhhhcccCCC-CCCCCc
Q 010506 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY-QTVLDQLVDVYKQVKIGDP-LEKGTL 338 (508)
Q Consensus 261 ~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~L~~~~~~~~~g~p-~~~~~~ 338 (508)
+++++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++ |+|+++|.+.++++++|+| .+++++
T Consensus 236 ~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~ 315 (484)
T TIGR03240 236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPF 315 (484)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 78999999999999999999999999999999999999999999999999985 9999999999999999997 577889
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhc
Q 010506 339 LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINN 418 (508)
Q Consensus 339 ~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 418 (508)
+||+++.++++++.++++++.++|+++++||...+.+++|++|||+++++++.++++|+||||++|++|+|++|||+++|
T Consensus 316 ~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n 395 (484)
T TIGR03240 316 MGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIAN 395 (484)
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEEccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHh
Confidence 99999999999999999999999999999887545568999999988889999999999999999999999999999999
Q ss_pred cCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeCCC-
Q 010506 419 SVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGN- 497 (508)
Q Consensus 419 ~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~- 497 (508)
+++|||+++|||+|.+.+++++ .++++|+|+||.......+.+||||+|.||+|+++|.++++ |++.|++++++..
T Consensus 396 ~~~~gL~~~v~t~d~~~a~~~~--~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~~~~ 472 (484)
T TIGR03240 396 NTRFGLSAGLLSDDRELYDRFL--LEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEADSL 472 (484)
T ss_pred CCCCCceEEEEcCCHHHHHHHH--HhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEecccc
Confidence 9999999999999999999999 78999999999876555567899999999999999977765 9999999999722
Q ss_pred --CCCCccCCCC
Q 010506 498 --ELPLAQGINF 507 (508)
Q Consensus 498 --~~~~~~~~~~ 507 (508)
..|..|++.|
T Consensus 473 ~~~~~~~~~~~~ 484 (484)
T TIGR03240 473 TLPATLSPGLKF 484 (484)
T ss_pred cCCCCcCCCCCC
Confidence 2377888765
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-96 Score=766.27 Aligned_cols=451 Identities=25% Similarity=0.440 Sum_probs=420.7
Q ss_pred EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh
Q 010506 36 VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (508)
Q Consensus 36 ~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (508)
++++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 82 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA 82 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhhhcCCcccCC--CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCC
Q 010506 116 EVQEVIDMCDFAVGLSRQLNGSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTT 193 (508)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~ 193 (508)
|+..+++.+++++...+.......... ......+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus 83 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~ 162 (457)
T PRK09406 83 EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNV 162 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence 999999999999987765543221111 122345778999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeE
Q 010506 194 PLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAI 273 (508)
Q Consensus 194 ~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~ 273 (508)
|+++..+ .+++.++|+|+|++|+|+++.+.+..|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+
T Consensus 163 p~~~~~l----~~l~~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~ 238 (457)
T PRK09406 163 PQTALYL----ADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPF 238 (457)
T ss_pred cHHHHHH----HHHHHHhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCee
Confidence 9999866 556789999999999998755677889999999999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHH
Q 010506 274 IIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEK 353 (508)
Q Consensus 274 iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~ 353 (508)
||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.+
T Consensus 239 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~ 318 (457)
T PRK09406 239 IVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEK 318 (457)
T ss_pred EECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCC
Q 010506 354 GIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432 (508)
Q Consensus 354 ~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d 432 (508)
++++++++|+++++||...+..|+|++|||+ +++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus 319 ~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d 398 (457)
T PRK09406 319 QVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRD 398 (457)
T ss_pred HHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 9999999999999999875557999999988 688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010506 433 PENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 433 ~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
.+.+++++ .++++|+|+||+.+. ..+.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 399 ~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 399 EAEQERFI--DDLEAGQVFINGMTV-SYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred HHHHHHHH--HhCCcceEEECCCCC-CCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 99999999 789999999998654 44678999999999999999999999999999864
|
|
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-95 Score=768.38 Aligned_cols=460 Identities=31% Similarity=0.526 Sum_probs=428.9
Q ss_pred CEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 010506 27 GKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSI 104 (508)
Q Consensus 27 g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~ 104 (508)
|+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|++++++|++++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~ 80 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR 80 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 56763 3567999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCE
Q 010506 105 EMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNC 184 (508)
Q Consensus 105 e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~ 184 (508)
|+|||+.+++.|+..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+.+.++++++||++||+
T Consensus 81 e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~ 160 (465)
T cd07151 81 ESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNA 160 (465)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCE
Confidence 99999999999999999999999887776655443332234456778999999999999999999999999999999999
Q ss_pred EEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCce
Q 010506 185 VVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263 (508)
Q Consensus 185 VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~ 263 (508)
||+|||+.+|.++.. ++.+++.++|+|+|++|+|+| +.+.+..|+.||.++.|+||||+.+|+.|++.++++++|+
T Consensus 161 Vi~Kps~~~p~~~~~---~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~ 237 (465)
T cd07151 161 VVLKPASDTPITGGL---LLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKV 237 (465)
T ss_pred EEEECCCCCcHhHHH---HHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcE
Confidence 999999999998632 357778999999999999998 6778899999999999999999999999999999999999
Q ss_pred eeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCC
Q 010506 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLH 343 (508)
Q Consensus 264 ~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~ 343 (508)
++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++.+||++
T Consensus 238 ~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli 317 (465)
T cd07151 238 ALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLI 317 (465)
T ss_pred EEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCC
Q 010506 344 TPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422 (508)
Q Consensus 344 ~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 422 (508)
+.++++++.+++++++++|+++++||.. +|+|++|||+ ++++++.+++||+||||++|++|+|+||||+++|+++|
T Consensus 318 ~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~ 394 (465)
T cd07151 318 NESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEY 394 (465)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCc
Confidence 9999999999999999999999999964 5899999987 68899999999999999999999999999999999999
Q ss_pred CcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEe
Q 010506 423 GLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 423 gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 494 (508)
||++||||+|.+++++++ .++++|+|+||..+....+.+||||+|.||+|+++|.+++++|++.|+++++
T Consensus 395 gL~a~v~t~d~~~a~~~~--~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 395 GLSGAVFTSDLERGVQFA--RRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred cceEEEECCCHHHHHHHH--HhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 999999999999999999 7899999999987655456789999999999999999999999999999874
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-95 Score=767.77 Aligned_cols=467 Identities=27% Similarity=0.445 Sum_probs=434.9
Q ss_pred CceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010506 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 22 ~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
++||||+|+. +++.++++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 81 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA 81 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999983 46789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHh
Q 010506 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (508)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 179 (508)
++++.|+|||+.+++.|+...++.+++++...+.+.++......++...+..++|+|||++|+|||||+.+.++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 161 (477)
T TIGR01722 82 ELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAI 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877766554433222334556789999999999999999999999999999
Q ss_pred hcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhc
Q 010506 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (508)
Q Consensus 180 aaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (508)
++||+||+|||+.+|.++..+ .++|.++|+|+|++|+|+|+.+.++.|+.||+|+.|+||||+.+|+.|++.++.+
T Consensus 162 aaGN~VilKps~~~p~~~~~l----~~~l~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~ 237 (477)
T TIGR01722 162 ACGNTFVLKPSEKVPSAAVKL----AELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAH 237 (477)
T ss_pred hcCCEEEeeCcccChHHHHHH----HHHHHHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhc
Confidence 999999999999999999865 5678899999999999998777889999999999999999999999999999999
Q ss_pred cCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCcc
Q 010506 260 FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLL 339 (508)
Q Consensus 260 ~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~ 339 (508)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|+++++++++|+|.+++++|
T Consensus 238 ~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~ 316 (477)
T TIGR01722 238 GKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEM 316 (477)
T ss_pred CCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc--C--CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHH
Q 010506 340 GPLHTPESRKNFEKGIENIKSQGGKILTGGSVI--E--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAV 414 (508)
Q Consensus 340 gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~--~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 414 (508)
||+++..+++++.+++++++++|+++++||... + .+|+|++|||+ ++++++.++++|+||||++|++|+|++|||
T Consensus 317 Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai 396 (477)
T TIGR01722 317 GPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAI 396 (477)
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHH
Confidence 999999999999999999999999999999752 1 35899999988 789999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC--CcchHHHHHHhhheeEEE
Q 010506 415 KINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG--REAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 415 ~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g--~~~g~~~~~~~~~~k~v~ 492 (508)
+++|+++|||+++|||+|.+.+++++ .++++|+|+||+++....+.+||||+|.||+| +++|.+++++||+.|+++
T Consensus 397 ~~~n~~~~gl~~~v~t~d~~~~~~~~--~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~ 474 (477)
T TIGR01722 397 ALINASPYGNGTAIFTRDGAAARRFQ--HEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVT 474 (477)
T ss_pred HHHhCCCCCCeEEEEcCCHHHHHHHH--HhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEE
Confidence 99999999999999999999999999 78999999999876555567899999999999 578999999999999998
Q ss_pred EeC
Q 010506 493 INY 495 (508)
Q Consensus 493 ~~~ 495 (508)
+++
T Consensus 475 ~~~ 477 (477)
T TIGR01722 475 TRW 477 (477)
T ss_pred EeC
Confidence 864
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-95 Score=771.49 Aligned_cols=464 Identities=34% Similarity=0.553 Sum_probs=433.3
Q ss_pred eecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010506 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 24 ~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
||||+|+. ++.+++++||+||+++++++.++.+|++++++.|++|++ .|+.+|.++|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 68999984 467899999999999999999999999999999999997 59999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHh
Q 010506 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (508)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 179 (508)
+++++|+|||..+++.|+...++.+++++...+...+...... .+...+..++|+|||++|+|||||+.+.++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYDVP-PHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988776544433222 344567889999999999999999999999999999
Q ss_pred hcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhh
Q 010506 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258 (508)
Q Consensus 180 aaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~ 258 (508)
++||+||+|||+.+|.++..+ .++|.++|+|+|++|+|+| +.+.++.|+.||++++|+||||+.+|+.|++.+++
T Consensus 160 aaGN~VilKps~~~p~~~~~l----~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~ 235 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIAL----FELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG 235 (482)
T ss_pred hcCCEEEEECCccccHHHHHH----HHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh
Confidence 999999999999999999876 5567889999999999998 55689999999999999999999999999999999
Q ss_pred ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCc
Q 010506 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTL 338 (508)
Q Consensus 259 ~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~ 338 (508)
+++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.+++++
T Consensus 236 ~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~ 315 (482)
T cd07119 236 NVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTE 315 (482)
T ss_pred cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHH
Q 010506 339 LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (508)
Q Consensus 339 ~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 413 (508)
+||+++..+++++.+++++++++|+++++||...+ ..|+|++|||+ ++++++.++++|+||||++|++|+|++||
T Consensus 316 ~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~dea 395 (482)
T cd07119 316 MGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEA 395 (482)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHH
Confidence 99999999999999999999999999999997532 25899999988 68899999999999999999999999999
Q ss_pred HHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010506 414 VKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 414 i~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
|+++|+++|||++||||+|.+.+++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 396 i~~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 472 (482)
T cd07119 396 IRLANDTPYGLAGAVWTKDIARANRVA--RRLRAGTVWINDYHP-YFAEAPWGGYKQSGIGRELGPTGLEEYQETKHINI 472 (482)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHH--HhcCcceEEECCCCC-CCCCCCcCCcccCcCCccchHHHHHHHhceEEEEE
Confidence 999999999999999999999999999 789999999998643 45678999999999999999999999999999999
Q ss_pred eC
Q 010506 494 NY 495 (508)
Q Consensus 494 ~~ 495 (508)
++
T Consensus 473 ~~ 474 (482)
T cd07119 473 NL 474 (482)
T ss_pred ec
Confidence 87
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-95 Score=769.49 Aligned_cols=466 Identities=31% Similarity=0.520 Sum_probs=432.6
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhc--cCChhHHHHHHHHHHHHHHHhH
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWM--ELPAPKRGEVVRQIGDALREKL 95 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~--~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
..++||||+|+. ++..++++||+||+++++++.++.++++.++++|++|++.|+ .+|.++|.++|+++++.|+++.
T Consensus 3 ~~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (476)
T cd07091 3 PTGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDR 82 (476)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 367899999984 567899999999999999999999999999999999999855 9999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhh-hhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHH
Q 010506 96 HHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (508)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 174 (508)
++|++++++|+|||..++ ..|+..+++.+++++.+.+...+...+.. .+...+..++|+|||++|+|||||+.+++++
T Consensus 83 ~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 161 (476)
T cd07091 83 DELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPID-GNFLAYTRREPIGVCGQIIPWNFPLLMLAWK 161 (476)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeceeEEEEECCCcCHHHHHHHH
Confidence 999999999999998665 46999999999999887766555433322 3445677899999999999999999999999
Q ss_pred HHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHH
Q 010506 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (508)
Q Consensus 175 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (508)
+++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+| +.+.++.|+.|+++|.|+||||+.+|+.|+
T Consensus 162 ~~~AL~aGN~VvlKps~~~p~~~~~l----~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~ 237 (476)
T cd07091 162 LAPALAAGNTVVLKPAEQTPLSALYL----AELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIM 237 (476)
T ss_pred HHHHHHcCCEEEEeCCCCChHHHHHH----HHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999876 4567889999999999998 677889999999999999999999999999
Q ss_pred HHhhh-ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCC
Q 010506 254 QTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (508)
Q Consensus 254 ~~a~~-~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p 332 (508)
+.+++ +++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|
T Consensus 238 ~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p 317 (476)
T cd07091 238 EAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDP 317 (476)
T ss_pred HHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCC
Confidence 99987 88999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHH
Q 010506 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (508)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ 411 (508)
.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ ++++++.+++||+||||++|++|+|++
T Consensus 318 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 397 (476)
T cd07091 318 FDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTED 397 (476)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHH
Confidence 9999999999999999999999999999999999999875557899999988 689999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 412 EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 412 eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+.+. ..+.+||||+|.||+|+++|.+++++||+.|++
T Consensus 398 eai~~~n~~~~gLsa~v~t~d~~~~~~~~--~~l~~g~v~iN~~~~-~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~ 474 (476)
T cd07091 398 EVIERANDTEYGLAAGVFTKDINKALRVS--RALKAGTVWVNTYNV-FDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAV 474 (476)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHH--HhcCcceEEECCCCC-CCCCCCcCCcccCcCCccchHHHHHHhhceeEE
Confidence 99999999999999999999999999999 789999999998643 456789999999999999999999999999988
Q ss_pred EE
Q 010506 492 TI 493 (508)
Q Consensus 492 ~~ 493 (508)
++
T Consensus 475 ~~ 476 (476)
T cd07091 475 TI 476 (476)
T ss_pred eC
Confidence 53
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-95 Score=772.95 Aligned_cols=476 Identities=29% Similarity=0.505 Sum_probs=436.0
Q ss_pred hhhhcCCC-CCCCCceecCEEecCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHH
Q 010506 10 FLSEIGLS-PETPGCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQI 87 (508)
Q Consensus 10 ~~~~~~~~-~~~~~~~i~g~~~~~~~~~~v~~P~-~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~ 87 (508)
.|+.+.+. ...+++||||+|+.++.+++++||+ ||+++++++.++.+++++++++|++|++.|+.++.++|.++|+++
T Consensus 25 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~ 104 (514)
T PRK03137 25 ALKKVEKELGQDYPLIIGGERITTEDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRA 104 (514)
T ss_pred HHHHHHhhcccccceeECCEEecCCCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 44443322 4577899999999777889999999 699999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhc-CCcccCCCCCceeEEEEeecceEEEEeCCCC
Q 010506 88 GDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN-GSVIPSERPNHMMLETWNPLGVVGVITAFNF 166 (508)
Q Consensus 88 a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~ 166 (508)
+++|+++.++|++++++|+|||+.+++.|+...++.+++++...+... +..... .++...+.+++|+|||++|+||||
T Consensus 105 a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~g~~~~~~~~P~GVv~~I~PwN~ 183 (514)
T PRK03137 105 AAIIRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPVES-RPGEHNRYFYIPLGVGVVISPWNF 183 (514)
T ss_pred HHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCceEEEEEecCcEEEEECCCcc
Confidence 999999999999999999999999999999999999999988776553 222221 234456778999999999999999
Q ss_pred chhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCC
Q 010506 167 PCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGS 245 (508)
Q Consensus 167 P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs 245 (508)
|+.++++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|++||+++.|+||||
T Consensus 184 P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l----~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs 259 (514)
T PRK03137 184 PFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKF----VEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGS 259 (514)
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHH----HHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECC
Confidence 9999999999999999999999999999999876 4567899999999999998 6788999999999999999999
Q ss_pred HHHHHHHHHHhhh------ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHH
Q 010506 246 TKVGLMVQQTVHQ------RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319 (508)
Q Consensus 246 ~~~g~~i~~~a~~------~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~ 319 (508)
+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++||+|+++
T Consensus 260 ~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~ 339 (514)
T PRK03137 260 REVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEK 339 (514)
T ss_pred cHHHHHHHHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHH
Confidence 9999999999886 6899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccc
Q 010506 320 LVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELF 398 (508)
Q Consensus 320 L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~f 398 (508)
|+++++++++|+|.++. ++||+++..+++++.++++++.++ +++++||...+..|+|++|||+ ++++++++++||+|
T Consensus 340 l~~~~~~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~F 417 (514)
T PRK03137 340 VVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIF 417 (514)
T ss_pred HHHHHHhCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCC
Confidence 99999999999999988 999999999999999999999887 6999999764456999999987 68999999999999
Q ss_pred cceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCC-CCCCCccCCCCCCCC-Cc
Q 010506 399 APVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGA-EIGGAFGGEKATGGG-RE 476 (508)
Q Consensus 399 gPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfGG~~~SG~g-~~ 476 (508)
|||++|++|+|++|||+++|+++|||++||||+|.+.+++++ .++++|+|+||.++... ...+||||+|.||+| +.
T Consensus 418 gPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~ 495 (514)
T PRK03137 418 GPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKAR--REFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKA 495 (514)
T ss_pred CceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcCeEEECCCCCCCCCCCCCCCCcccccCCccc
Confidence 999999999999999999999999999999999999999999 78999999999865443 345899999999999 68
Q ss_pred chHHHHHHhhheeEEEEe
Q 010506 477 AGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 477 ~g~~~~~~~~~~k~v~~~ 494 (508)
+|.+++++||+.|+++..
T Consensus 496 gg~~~l~~ft~~k~v~~~ 513 (514)
T PRK03137 496 GGPDYLLLFLQAKTVSEM 513 (514)
T ss_pred CCHHHHHHhceEEEEEEe
Confidence 899999999999999764
|
|
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-95 Score=766.42 Aligned_cols=458 Identities=31% Similarity=0.572 Sum_probs=428.0
Q ss_pred eecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHH
Q 010506 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRL 101 (508)
Q Consensus 24 ~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 101 (508)
||||+|+. ++.++.++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 80 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL 80 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999983 4688999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChhhh-hhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhh
Q 010506 102 LSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180 (508)
Q Consensus 102 ~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 180 (508)
+++|+|||..++ ..|+..+++.+++++...+...+...+...+ ...+..++|+|||++|+|||||+...++++++||+
T Consensus 81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~-~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa 159 (467)
T TIGR01804 81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIP-SFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALA 159 (467)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCC-ceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHh
Confidence 999999999999 5799999999999998877665543332222 34577899999999999999999999999999999
Q ss_pred cCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhc
Q 010506 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (508)
Q Consensus 181 aGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (508)
+||+||+|||+.+|.++..+ .++|.++|+|+|++|+|+| +.+.++.|+.|+++|.|+||||+.+|+.|++.++++
T Consensus 160 aGN~VvlKps~~tp~~~~~l----~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~ 235 (467)
T TIGR01804 160 AGNAMVFKPSEITPLTALKV----AELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADH 235 (467)
T ss_pred cCCEEEeeCCccCcHHHHHH----HHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhc
Confidence 99999999999999999876 4567899999999999998 578999999999999999999999999999999999
Q ss_pred cCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCcc
Q 010506 260 FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLL 339 (508)
Q Consensus 260 ~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~ 339 (508)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++
T Consensus 236 l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 315 (467)
T TIGR01804 236 LKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEM 315 (467)
T ss_pred CCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHH
Q 010506 340 GPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAV 414 (508)
Q Consensus 340 gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 414 (508)
||+++..+.+++.+++++++.+|+++++||...+ .+|+|++|||+ ++++++++++||+||||++|++|+|+||||
T Consensus 316 gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai 395 (467)
T TIGR01804 316 GPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVI 395 (467)
T ss_pred CccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHH
Confidence 9999999999999999999999999999997633 25899999988 688999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhee
Q 010506 415 KINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489 (508)
Q Consensus 415 ~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k 489 (508)
+++|+++|||+++|||+|.+++++++ .++++|+|+||.+.. ..+.+||||+|.||+|+++|.+++++||+.|
T Consensus 396 ~~~n~~~~gLsa~i~t~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 396 ARANDTIYGLAAGVFTADLGRAHRVA--NQLKAGTVWINDFHP-YPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 99999999999999999999999999 889999999998654 4456899999999999999999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-95 Score=766.06 Aligned_cols=462 Identities=32% Similarity=0.575 Sum_probs=431.5
Q ss_pred eecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHH
Q 010506 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRL 101 (508)
Q Consensus 24 ~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 101 (508)
||||+|+. ++.+++++||+||+++++++.++.+++++++++|++|++.|+++|.++|.++|+++++.|+++.++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 80 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL 80 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999983 5688999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhc
Q 010506 102 LSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVC 181 (508)
Q Consensus 102 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaa 181 (508)
+++|+|||..+++.|+...++.+++++.+.+...+...+...++...+.+++|+|||++|+|||||+.+.++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~a 160 (468)
T cd07088 81 IVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVT 160 (468)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999887776655433322234456778999999999999999999999999999999
Q ss_pred CCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhcc
Q 010506 182 GNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260 (508)
Q Consensus 182 GN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~ 260 (508)
||+||+|||+.+|.++..+ .++|.++|+|+|++|+|+| +.+.++.|+.|+++|.|+||||+.+|+.|++.+++++
T Consensus 161 GN~VVlKps~~~p~~~~~l----~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 236 (468)
T cd07088 161 GNTIVIKPSEETPLNALEF----AELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENI 236 (468)
T ss_pred CCEEEEECCCcchHHHHHH----HHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcC
Confidence 9999999999999999876 4557889999999999998 5668899999999999999999999999999999999
Q ss_pred CceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccC
Q 010506 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLG 340 (508)
Q Consensus 261 ~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~g 340 (508)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++|
T Consensus 237 ~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 316 (468)
T cd07088 237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMG 316 (468)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhc
Q 010506 341 PLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINN 418 (508)
Q Consensus 341 pl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~-~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 418 (508)
|+++..+++++++++++++++|+++++||...+ ..|+|++|||+ ++++++.++++|+||||++|++|+|++|||+++|
T Consensus 317 pli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 396 (468)
T cd07088 317 PLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELAN 396 (468)
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHh
Confidence 999999999999999999999999999997643 46899999988 6889999999999999999999999999999999
Q ss_pred cCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 419 SVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 419 ~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
+++|||+++|||+|.+.+++++ .++++|+|+||+++... ...||||+|.||+|+++|.+++++||+.|+++
T Consensus 397 ~~~~gL~~~v~t~d~~~~~~~~--~~l~~g~v~iN~~~~~~-~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 397 DSEYGLTSYIYTENLNTAMRAT--NELEFGETYINRENFEA-MQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred CCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCCCCCC-CCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 9999999999999999999999 78999999999876433 45699999999999999999999999999885
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-95 Score=762.26 Aligned_cols=445 Identities=31% Similarity=0.544 Sum_probs=417.1
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhH
Q 010506 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117 (508)
Q Consensus 38 v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 117 (508)
++||.||+++++++.++.++++.++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKGEI 80 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHH
Q 010506 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197 (508)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~ 197 (508)
...++.+++++...+...+...+....+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~ 160 (448)
T TIGR01780 81 LYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSA 160 (448)
T ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHH
Confidence 99999999998877666554333322344556778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCeEEEecCC--hhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEE
Q 010506 198 IAITKLVSEVFERNKLPGAIFTSFCGG--AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (508)
Q Consensus 198 ~~l~~~l~~~l~~aGlP~g~~~~v~g~--~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV 275 (508)
..+ .++|.++|+|+|++|+|+|+ .+.++.|++||+++.|+||||+.+|+.|++.++++++|+++|+|||||+||
T Consensus 161 ~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV 236 (448)
T TIGR01780 161 LAL----ARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIV 236 (448)
T ss_pred HHH----HHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEE
Confidence 876 45578999999999999984 678899999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHH
Q 010506 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (508)
Q Consensus 276 ~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (508)
++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++..+++++.+++
T Consensus 237 ~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i 316 (448)
T TIGR01780 237 FDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHI 316 (448)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHH
Q 010506 356 ENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434 (508)
Q Consensus 356 ~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~ 434 (508)
++++++|+++++||...+.+|+|++|||+ ++++++++++||+||||++|++|+|++|||+++|+++|||++||||+|.+
T Consensus 317 ~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~ 396 (448)
T TIGR01780 317 ADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLA 396 (448)
T ss_pred HHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHH
Confidence 99999999999999764456899999988 68999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhee
Q 010506 435 NIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489 (508)
Q Consensus 435 ~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k 489 (508)
.+++++ .++++|.|+||+... .++..||||+|.||+|+++|.+++++|++.|
T Consensus 397 ~~~~~~--~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 397 TIWRVA--EALEYGMVGINTGLI-SNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred HHHHHH--HhCCccEEEECCCCC-CCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 999999 789999999998654 4456899999999999999999999999875
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-94 Score=766.12 Aligned_cols=479 Identities=28% Similarity=0.477 Sum_probs=439.9
Q ss_pred hhhhhcCCC-CCCCCceecCEEecCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHH
Q 010506 9 EFLSEIGLS-PETPGCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQ 86 (508)
Q Consensus 9 ~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~v~~P~-~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~ 86 (508)
++++..+.. ...+++||+|+|+.++..++++||. ||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|++
T Consensus 6 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 85 (500)
T cd07083 6 EALRRVKEEFGRAYPLVIGGEWVDTKERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLK 85 (500)
T ss_pred HHHHHHHhhccccccceECCEEecCCCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 455555543 5788899999999777889999998 69999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCccc-CCCCCceeEEEEeecceEEEEeCCC
Q 010506 87 IGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP-SERPNHMMLETWNPLGVVGVITAFN 165 (508)
Q Consensus 87 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n 165 (508)
+++.|+++.++|+++++.|+|||+.+++.|+...++.+++++..++...+.... ....+...+..++|+|||++|+|||
T Consensus 86 ~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N 165 (500)
T cd07083 86 AADLLRRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWN 165 (500)
T ss_pred HHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCc
Confidence 999999999999999999999999999999999999999999887765443211 1123445667899999999999999
Q ss_pred CchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeC
Q 010506 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244 (508)
Q Consensus 166 ~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftG 244 (508)
||+.+.++++++||++||+||+|||+.+|.++..++ +++.++|+|+|++|+|+| +.+.++.|+.||++|.|+|||
T Consensus 166 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~----~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftG 241 (500)
T cd07083 166 FPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVF----EIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTG 241 (500)
T ss_pred cHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHH----HHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEEC
Confidence 999999999999999999999999999999998764 557889999999999998 678899999999999999999
Q ss_pred CHHHHHHHHHHhhhcc------CceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHH
Q 010506 245 STKVGLMVQQTVHQRF------GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318 (508)
Q Consensus 245 s~~~g~~i~~~a~~~~------~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~ 318 (508)
|+.+|+.|++.++++. +|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|++
T Consensus 242 s~~~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~ 321 (500)
T cd07083 242 SLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLE 321 (500)
T ss_pred cHHHHHHHHHHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHH
Confidence 9999999999998876 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCccccccc
Q 010506 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEEL 397 (508)
Q Consensus 319 ~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~ 397 (508)
+|+++++++++|+|.++++++||+++..++++++++++++++.| ++++||...+..|+|++|||+ ++++++.+++||+
T Consensus 322 ~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~ 400 (500)
T cd07083 322 RLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEI 400 (500)
T ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCC
Confidence 99999999999999999999999999999999999999998877 999999875556899999988 6888999999999
Q ss_pred ccceeEeEEeC--CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCC-CCCCccCCCCCCCC
Q 010506 398 FAPVLYVMKFQ--TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAE-IGGAFGGEKATGGG 474 (508)
Q Consensus 398 fgPvl~v~~~~--~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~-~~~pfGG~~~SG~g 474 (508)
||||++|++|+ |++|||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+.+.... +.+||||+|.||+|
T Consensus 401 FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G 478 (500)
T cd07083 401 FGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEAR--REFHVGNLYINRKITGALVGVQPFGGFKLSGTN 478 (500)
T ss_pred CCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHH--HhCCeeEEEECCCCCCCCCCCCCCCccccccCC
Confidence 99999999999 99999999999999999999999999999999 789999999998754443 45799999999999
Q ss_pred -CcchHHHHHHhhheeEEEEe
Q 010506 475 -REAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 475 -~~~g~~~~~~~~~~k~v~~~ 494 (508)
+.+|.+++++|++.|+++..
T Consensus 479 ~~~~g~~~l~~~~~~k~~~~~ 499 (500)
T cd07083 479 AKTGGPHYLRRFLEMKAVAER 499 (500)
T ss_pred CcccCHHHHHHhhheeEEEEc
Confidence 67899999999999999764
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-95 Score=761.22 Aligned_cols=461 Identities=25% Similarity=0.441 Sum_probs=425.9
Q ss_pred CCceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHH
Q 010506 21 PGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGR 100 (508)
Q Consensus 21 ~~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 100 (508)
-++||||+|+.++.+++++||+|++++++++.++.+|+++++++|++|+ +.++..+|.++|++++++|+++.++|++
T Consensus 4 ~~~~i~g~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~ 80 (472)
T TIGR03250 4 EALRIAGEKVSRDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISD 80 (472)
T ss_pred CCceECCEEecCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 4689999999767889999999999999999999999999999999885 5789999999999999999999999999
Q ss_pred HHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccC----CCCCceeEEEEeec-ceEEEEeCCCCchhhhHHHH
Q 010506 101 LLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS----ERPNHMMLETWNPL-GVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 101 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~l 175 (508)
++++|+|||..+++.|+..+++.+++++...+...+..... ...+...+..++|+ |||++|+|||||+.++++++
T Consensus 81 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~ 160 (472)
T TIGR03250 81 LITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKI 160 (472)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHH
Confidence 99999999999999999999999999998776654432211 11233567889998 99999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH
Q 010506 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (508)
++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+| +.+.+..|++||+++.|+||||+.+|+.|++
T Consensus 161 ~~ALaaGN~VvlKps~~~p~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 236 (472)
T TIGR03250 161 APAIATNNRMVVKPSEKTPLSALYL----ADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAA 236 (472)
T ss_pred HHHHHcCCEEEEECCCcchHHHHHH----HHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999876 5567889999999999998 6788999999999999999999999999999
Q ss_pred HhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCC
Q 010506 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 255 ~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
.++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.+
T Consensus 237 ~a~--~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 314 (472)
T TIGR03250 237 RAG--YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMD 314 (472)
T ss_pred Hhc--CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCC
Confidence 876 789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHH
Q 010506 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 413 (508)
+++++||+++..+++++.+++++++++|+++++||.. +|+|++|||+ +++++|++++||+||||++|++|+|.+||
T Consensus 315 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ea 391 (472)
T TIGR03250 315 PSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDA 391 (472)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHH
Confidence 9999999999999999999999999999999999864 5899999988 78999999999999999999999999999
Q ss_pred HHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC-CcchHHHHHHhhheeEEE
Q 010506 414 VKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG-REAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 414 i~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g-~~~g~~~~~~~~~~k~v~ 492 (508)
++++|+++|||++||||+|.+++.+++ .++++|+||||..+....+.+||||+|.||+| +.+|.+++++||+.|+++
T Consensus 392 i~~aN~~~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~ 469 (472)
T TIGR03250 392 IRISNSTAYGLSSGVCTNRLDYITRFI--AELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYS 469 (472)
T ss_pred HHHHhCCCccceEEEEcCCHHHHHHHH--HHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEE
Confidence 999999999999999999999999999 78999999999865444445899999999999 566789999999999998
Q ss_pred EeC
Q 010506 493 INY 495 (508)
Q Consensus 493 ~~~ 495 (508)
++|
T Consensus 470 ~~~ 472 (472)
T TIGR03250 470 LPW 472 (472)
T ss_pred EeC
Confidence 764
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-94 Score=763.48 Aligned_cols=473 Identities=25% Similarity=0.421 Sum_probs=431.4
Q ss_pred hhhhcCCCCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHH
Q 010506 10 FLSEIGLSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQI 87 (508)
Q Consensus 10 ~~~~~~~~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~ 87 (508)
+++++.. ..++++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++..+|.++|+++
T Consensus 6 ~~~~~~~-~~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~ 84 (496)
T PLN00412 6 FFAEILD-GDVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKA 84 (496)
T ss_pred HHHHHhc-ccccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3444442 26678999999984 46789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcC--Cccc-----CCCCCceeEEEEeecceEEE
Q 010506 88 GDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG--SVIP-----SERPNHMMLETWNPLGVVGV 160 (508)
Q Consensus 88 a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~P~GVv~~ 160 (508)
++.|++++++|+++++.|+|||+.+++.|+...++.+++++........ .... ....+...+.+++|+|||++
T Consensus 85 a~~l~~~~~el~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~ 164 (496)
T PLN00412 85 AAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLA 164 (496)
T ss_pred HHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEE
Confidence 9999999999999999999999999999999999999998876544321 1111 11112244678899999999
Q ss_pred EeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCE
Q 010506 161 ITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISL 239 (508)
Q Consensus 161 i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~ 239 (508)
|+|||||+.+.++++++||++||+||+|||+.+|.++..++ +++.++|+|+|++|+|+| +.+.++.|..||+++.
T Consensus 165 I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~----~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~ 240 (496)
T PLN00412 165 IPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMV----HCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNC 240 (496)
T ss_pred ECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHH----HHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCE
Confidence 99999999999999999999999999999999999988764 557899999999999998 5788999999999999
Q ss_pred EEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHH
Q 010506 240 VSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319 (508)
Q Consensus 240 v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~ 319 (508)
|.|||| .+|+.|++.++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++
T Consensus 241 V~ftGs-~~g~~v~~~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~ 317 (496)
T PLN00412 241 ISFTGG-DTGIAISKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEK 317 (496)
T ss_pred EEEeCh-HHHHHHHHHhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHH
Confidence 999999 99999999875 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccc
Q 010506 320 LVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELF 398 (508)
Q Consensus 320 L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~f 398 (508)
|+++++++++|+|.+ ++++||+++..+++++.+++++++.+|+++++||.. .|+|+.|||+ ++++++++++||+|
T Consensus 318 l~~~~~~~~~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~F 393 (496)
T PLN00412 318 VNAKVAKLTVGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPF 393 (496)
T ss_pred HHHHHHhCccCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCC
Confidence 999999999999987 789999999999999999999999999999997753 6899999988 79999999999999
Q ss_pred cceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcch
Q 010506 399 APVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAG 478 (508)
Q Consensus 399 gPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g 478 (508)
|||++|++|+|+||||+++|+++|||++||||+|.+++++++ .++++|+|+||++.......+||||+|.||+|+++|
T Consensus 394 gPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g 471 (496)
T PLN00412 394 GPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILIS--DAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGI 471 (496)
T ss_pred CCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcceEEEcCCCCCCCCCCCCCCccccccCCCCh
Confidence 999999999999999999999999999999999999999999 789999999999765444578999999999999999
Q ss_pred HHHHHHhhheeEEEEeCC
Q 010506 479 SDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 479 ~~~~~~~~~~k~v~~~~~ 496 (508)
.+++++||+.|+++++++
T Consensus 472 ~~~~~~ft~~k~i~~~~~ 489 (496)
T PLN00412 472 TNSINMMTKVKSTVINLP 489 (496)
T ss_pred HHHHHHhcceEEEEEecC
Confidence 999999999999999874
|
|
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-94 Score=762.95 Aligned_cols=467 Identities=25% Similarity=0.435 Sum_probs=433.1
Q ss_pred CCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhccCChhHHHHHHHHHHHHHHH
Q 010506 18 PETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALRE 93 (508)
Q Consensus 18 ~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 93 (508)
+-..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++ .|+.+|.++|.++|+++++.|++
T Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~ 96 (494)
T PRK09847 17 AIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEA 96 (494)
T ss_pred ccccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHH
Confidence 44557899999983 567899999999999999999999999999999999997 59999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhH
Q 010506 94 KLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (508)
Q Consensus 94 ~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 172 (508)
+.++|+++++.|+|||+.++. .|+..+++.+++++...+...++..+.. .+...+..++|+|||++|+|||||+.+++
T Consensus 97 ~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 175 (494)
T PRK09847 97 HAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTS-SHELAMIVREPVGVIAAIVPWNFPLLLTC 175 (494)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEecceeEEEEECCCccHHHHHH
Confidence 999999999999999999875 5999999999999988877655443322 23345678999999999999999999999
Q ss_pred HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHH
Q 010506 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (508)
Q Consensus 173 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (508)
+++++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+| +.+.+..|+.||++|.|+||||+.+|+.
T Consensus 176 ~~~~~ALaaGN~VvlKps~~~p~~~~~l----~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~ 251 (494)
T PRK09847 176 WKLGPALAAGNSVILKPSEKSPLSAIRL----AGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQ 251 (494)
T ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHH----HHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999876 4567899999999999998 7788999999999999999999999999
Q ss_pred HHHHhh-hccCceeeccCccCeEEEcCCC-CHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhccc
Q 010506 252 VQQTVH-QRFGKCLLELSGNNAIIIMDDA-DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329 (508)
Q Consensus 252 i~~~a~-~~~~~~~~elgG~~~~iV~~da-Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~ 329 (508)
|++.++ ++++|+++|+|||||+||.+|+ |++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++.+++
T Consensus 252 v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 331 (494)
T PRK09847 252 LLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQP 331 (494)
T ss_pred HHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence 999988 5889999999999999999997 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeC
Q 010506 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ 408 (508)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~ 408 (508)
|+|.++++.+||+++..+++++.+++++++++| ++++||.. +..+.|++|||+ ++++++++++||+||||++|++|+
T Consensus 332 g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~-~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 409 (494)
T PRK09847 332 GHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRN-AGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFT 409 (494)
T ss_pred CCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCcc-CCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecC
Confidence 999999999999999999999999999999999 99999876 345789999987 699999999999999999999999
Q ss_pred CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhe
Q 010506 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRR 488 (508)
Q Consensus 409 ~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~ 488 (508)
|++|||+++|+++|||+++|||+|.+.+.+++ .++++|+|+||+.+. ..+.+||||+|.||+|+++|.+++++|++.
T Consensus 410 ~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~ 486 (494)
T PRK09847 410 SEEQALQLANDSQYGLGAAVWTRDLSRAHRMS--RRLKAGSVFVNNYND-GDMTVPFGGYKQSGNGRDKSLHALEKFTEL 486 (494)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCcCCCcccccCccchHHHHHHhhce
Confidence 99999999999999999999999999999999 789999999998653 445689999999999999999999999999
Q ss_pred eEEEEe
Q 010506 489 STCTIN 494 (508)
Q Consensus 489 k~v~~~ 494 (508)
|+|+++
T Consensus 487 k~v~~~ 492 (494)
T PRK09847 487 KTIWIS 492 (494)
T ss_pred EEEEEe
Confidence 999875
|
|
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-95 Score=764.18 Aligned_cols=462 Identities=30% Similarity=0.494 Sum_probs=428.7
Q ss_pred ceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH--hccCChhHHHHHHHHHHHHHHHhHHHH
Q 010506 23 CFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPAPKRGEVVRQIGDALREKLHHL 98 (508)
Q Consensus 23 ~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (508)
+||||+|+. ++.+++++||+||+++++++.++.+|++.++++|++|++. |+.+|.++|.++|+++++.|+++.++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 489999984 4578999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHH
Q 010506 99 GRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (508)
Q Consensus 99 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 177 (508)
+++++.|+|||..++. .|+...++.+++++...+............+...+..++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ 160 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP 160 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence 9999999999998775 599999999999998876543322111112345677899999999999999999999999999
Q ss_pred HhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhh
Q 010506 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (508)
Q Consensus 178 ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (508)
||++||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+|+.+.+..|+.|++++.|+||||+.+|+.|++.++
T Consensus 161 ALaaGN~VvlKps~~~p~~~~~l----~~~~~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~ 236 (471)
T cd07139 161 ALAAGCTVVLKPSPETPLDAYLL----AEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG 236 (471)
T ss_pred HHhcCCEEEEECCCcCCHHHHHH----HHHHHHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999865 56788999999999999987778999999999999999999999999999999
Q ss_pred hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCC
Q 010506 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337 (508)
Q Consensus 258 ~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~ 337 (508)
++++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++
T Consensus 237 ~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 316 (471)
T cd07139 237 ERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPAT 316 (471)
T ss_pred hcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHH
Q 010506 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAV 414 (508)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 414 (508)
++||+++..+++++.+++++++.+|+++++||...+ ..|+|++|||+ ++++++++++||+||||++|++|+|++|||
T Consensus 317 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai 396 (471)
T cd07139 317 QIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAV 396 (471)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHH
Confidence 999999999999999999999999999999997643 35899999987 799999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 415 KINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 415 ~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
+++|+++|||+++|||+|.+.+++++ .++++|+|+||++. ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 397 ~~~n~~~~gL~a~i~s~d~~~~~~~~--~~l~~G~v~iN~~~--~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 397 RIANDSDYGLSGSVWTADVERGLAVA--RRIRTGTVGVNGFR--LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcceEEECCCC--CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999 78999999999865 4567899999999999999999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-94 Score=760.39 Aligned_cols=457 Identities=28% Similarity=0.491 Sum_probs=426.4
Q ss_pred ceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHH
Q 010506 23 CFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGR 100 (508)
Q Consensus 23 ~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 100 (508)
+||||+|+. ++++++++||.||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 80 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ 80 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 589999984 357899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHh
Q 010506 101 LLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (508)
Q Consensus 101 ~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 179 (508)
++++|+|||..+++ .|+...++.+++++...+....... ....+..++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 155 (466)
T cd07138 81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER-----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL 155 (466)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc-----CceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 99999999999886 4898999999999887765543221 22456689999999999999999999999999999
Q ss_pred hcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhh
Q 010506 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258 (508)
Q Consensus 180 aaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~ 258 (508)
++||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+| +.+.++.|+.||+++.|+||||+.+|+.|++.++.
T Consensus 156 aaGN~Vv~Kps~~~p~~~~~l----~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 231 (466)
T cd07138 156 AAGCTVVLKPSEVAPLSAIIL----AEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD 231 (466)
T ss_pred hcCCEEEEECCCcCcHHHHHH----HHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 999999999999999999876 5667899999999999998 66789999999999999999999999999999999
Q ss_pred ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCc
Q 010506 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTL 338 (508)
Q Consensus 259 ~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~ 338 (508)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|||++++++
T Consensus 232 ~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 311 (466)
T cd07138 232 TVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATT 311 (466)
T ss_pred cCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-C--CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHH
Q 010506 339 LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI-E--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAV 414 (508)
Q Consensus 339 ~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~-~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 414 (508)
+||+++..+++++.+++++++++|+++++||... + ..|+|++|||+ ++++++++++||+||||++|++|+|.+|||
T Consensus 312 ~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai 391 (466)
T cd07138 312 LGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAI 391 (466)
T ss_pred CCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHH
Confidence 9999999999999999999999999999999642 2 36899999987 788899999999999999999999999999
Q ss_pred HHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 415 KINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 415 ~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
+++|+++|||+++|||+|.+.+++++ .++++|+|+||+.. ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 392 ~~~n~~~~gL~a~i~t~d~~~a~~~~--~~l~~G~v~iN~~~--~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 392 AIANDTPYGLAGYVWSADPERARAVA--RRLRAGQVHINGAA--FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHH--HhcCcceEEECCCC--CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 99999999999999999999999999 78999999999853 3567899999999999999999999999999874
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-94 Score=755.26 Aligned_cols=450 Identities=34% Similarity=0.558 Sum_probs=420.3
Q ss_pred EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh
Q 010506 36 VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (508)
Q Consensus 36 ~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (508)
++++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV 80 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhhhcCCcccCCC----CCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCC
Q 010506 116 EVQEVIDMCDFAVGLSRQLNGSVIPSER----PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (508)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 191 (508)
|+..+++.+++++...+.+.+...+... .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 160 (456)
T cd07145 81 EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCc
Confidence 9999999999998877665554322211 133456789999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCcc
Q 010506 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGN 270 (508)
Q Consensus 192 ~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~ 270 (508)
.+|.++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||+++.|+||||+.+|+.|++.++++++|+++|+|||
T Consensus 161 ~~p~~~~~l----~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~ 236 (456)
T cd07145 161 NTPLTAIEL----AKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGS 236 (456)
T ss_pred cchHHHHHH----HHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCC
Confidence 999999876 5567888999999999999 67889999999999999999999999999999999999999999999
Q ss_pred CeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHH
Q 010506 271 NAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKN 350 (508)
Q Consensus 271 ~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 350 (508)
||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..++++
T Consensus 237 n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 316 (456)
T cd07145 237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVER 316 (456)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEe
Q 010506 351 FEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429 (508)
Q Consensus 351 ~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~ 429 (508)
+++++++++++|+++++||... .|+|++|||+ +++++++++++|+||||++|++|+|++|||+++|+++|||++|||
T Consensus 317 ~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~ 394 (456)
T cd07145 317 MENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVF 394 (456)
T ss_pred HHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEE
Confidence 9999999999999999999762 3899999988 678899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010506 430 TRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 430 s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
|+|.+.+.+++ .++++|+|+||+.+......+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 395 t~d~~~~~~~~--~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 395 TNDINRALKVA--RELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred CCCHHHHHHHH--HhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEeC
Confidence 99999999999 789999999998765444578999999999999999999999999998853
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-94 Score=752.76 Aligned_cols=449 Identities=29% Similarity=0.504 Sum_probs=419.2
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhH
Q 010506 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117 (508)
Q Consensus 38 v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 117 (508)
++||.||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++.|+
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLGDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHH
Q 010506 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197 (508)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~ 197 (508)
...++.+++++...+.+.+...+.. .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~ 159 (456)
T cd07107 81 MVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSA 159 (456)
T ss_pred HHHHHHHHHHHHHHHHhCCccccCC-CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHH
Confidence 9999999999987776665543322 234567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEc
Q 010506 198 IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIM 276 (508)
Q Consensus 198 ~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~ 276 (508)
..++++ +.+ ++|+|++|+|+| +.+.++.|++||+++.|+||||+.+|+.|++.++++++|+++|+|||||+||+
T Consensus 160 ~~l~~~----~~~-~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~ 234 (456)
T cd07107 160 LRLAEL----ARE-VLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVF 234 (456)
T ss_pred HHHHHH----HHH-hCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEEC
Confidence 887655 445 499999999998 56688999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHH-HhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHH
Q 010506 277 DDADIKLAVRSVLFAA-VGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (508)
Q Consensus 277 ~daDl~~aa~~i~~~~-~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (508)
+|||++.|++.|++++ |.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+++++.+++
T Consensus 235 ~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i 314 (456)
T cd07107 235 PDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYI 314 (456)
T ss_pred CCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHH
Confidence 9999999999999995 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEec
Q 010506 356 ENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (508)
Q Consensus 356 ~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s 430 (508)
+++.++|+++++||...+ ..|+|++|||+ ++++++++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft 394 (456)
T cd07107 315 DSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWT 394 (456)
T ss_pred HHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEEC
Confidence 999999999999997532 35899999988 6899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010506 431 RSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 431 ~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
+|.+++++++ .++++|+|+||.++. ..+.+||||+|.||+|+++|.+++++||+.|++++++
T Consensus 395 ~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 456 (456)
T cd07107 395 NDISQAHRTA--RRVEAGYVWINGSSR-HFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVRL 456 (456)
T ss_pred CCHHHHHHHH--HhcCcCEEEECCCCC-CCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEeC
Confidence 9999999999 789999999998754 4567899999999999999999999999999998763
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-94 Score=752.25 Aligned_cols=448 Identities=25% Similarity=0.397 Sum_probs=416.1
Q ss_pred EeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH-hccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh
Q 010506 37 SSINPVNNQKIATVVEASLEDYEEGMKACSEASKI-WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (508)
Q Consensus 37 ~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (508)
+++||+||+++++++.++.+|+++++++|++||+. |+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++.
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 81 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAKV 81 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 57899999999999999999999999999999998 46799999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhhhcCCcccCC----CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCC
Q 010506 116 EVQEVIDMCDFAVGLSRQLNGSVIPSE----RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (508)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 191 (508)
|+...++.+++++...+...+...+.. .++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 82 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 161 (455)
T cd07148 82 EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPAL 161 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCC
Confidence 999999999999988776655432211 1234567889999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccC
Q 010506 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271 (508)
Q Consensus 192 ~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~ 271 (508)
.+|+++..+ .+++.++|+|+|++|+|+|+.+.++.|+.||++|.|+||||+++|+.|++.++. .+|+++|+||||
T Consensus 162 ~~p~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~ 236 (455)
T cd07148 162 ATPLSCLAF----VDLLHEAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAA 236 (455)
T ss_pred cccHHHHHH----HHHHHHcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCC
Confidence 999999876 455778999999999999966789999999999999999999999999999876 589999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHH
Q 010506 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351 (508)
Q Consensus 272 ~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 351 (508)
|+||++|||++.|++.|++|+|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 237 p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 316 (455)
T cd07148 237 PVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRV 316 (455)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEec
Q 010506 352 EKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (508)
Q Consensus 352 ~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s 430 (508)
++++++++++|+++++||... +++|++|||+ ++++++++++||+||||++|++|+|++|||+++|+++|||+++|||
T Consensus 317 ~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t 394 (455)
T cd07148 317 EEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFT 394 (455)
T ss_pred HHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEc
Confidence 999999999999999999763 4789999988 6888999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010506 431 RSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 431 ~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
+|.+.+++++ .++++|+|+||+++......+||||+|.||+|+++|.+++++|++.|++++
T Consensus 395 ~d~~~~~~~~--~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 395 KDLDVALKAV--RRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred CCHHHHHHHH--HHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEeC
Confidence 9999999999 889999999998764444468999999999999999999999999998853
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-94 Score=753.78 Aligned_cols=449 Identities=33% Similarity=0.563 Sum_probs=422.2
Q ss_pred EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh
Q 010506 36 VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (508)
Q Consensus 36 ~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (508)
++++||+||+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|+++.++|+++++.|+|||+.+++.
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF 80 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChh
Q 010506 116 EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195 (508)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~ 195 (508)
|+...++.+++++...+...+...+...++...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 160 (451)
T cd07150 81 ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPV 160 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcH
Confidence 99999999999998877765544433323445678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEE
Q 010506 196 ITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274 (508)
Q Consensus 196 ~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~i 274 (508)
++..+ .+++.++|+|+|++|+|+| +.+.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+|
T Consensus 161 t~~~l----~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~i 236 (451)
T cd07150 161 IGLKI----AEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLI 236 (451)
T ss_pred HHHHH----HHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeE
Confidence 99876 5567889999999999998 678899999999999999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHH
Q 010506 275 IMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG 354 (508)
Q Consensus 275 V~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 354 (508)
|++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++
T Consensus 237 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~ 316 (451)
T cd07150 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQ 316 (451)
T ss_pred ECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCH
Q 010506 355 IENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433 (508)
Q Consensus 355 v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~ 433 (508)
+++++.+|+++++||.. +|+|++|||+ ++++++.++++|+||||++|++|+|++|||+++|+++|||++||||+|.
T Consensus 317 i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~ 393 (451)
T cd07150 317 VEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDL 393 (451)
T ss_pred HHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCH
Confidence 99999999999999864 5899999987 6888999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010506 434 ENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 434 ~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
+++++++ .++++|+|+||+++....+.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 394 ~~~~~~~--~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 394 QRAFKLA--ERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWITV 451 (451)
T ss_pred HHHHHHH--HhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEeC
Confidence 9999999 789999999999865555678999999999999999999999999998853
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-93 Score=752.85 Aligned_cols=448 Identities=32% Similarity=0.528 Sum_probs=419.0
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhH
Q 010506 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117 (508)
Q Consensus 38 v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 117 (508)
++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|+++.++|+++++.|+|||..++..|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAWDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcC---CcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCCh
Q 010506 118 QEVIDMCDFAVGLSRQLNG---SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTP 194 (508)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~ 194 (508)
..+++.+++++...+.+.. ...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p 160 (456)
T cd07110 81 DDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccch
Confidence 9999999999888776532 1122222344567889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeE
Q 010506 195 LITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAI 273 (508)
Q Consensus 195 ~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~ 273 (508)
+++..+ .+++.++|+|+|++|+|+| +.+.++.|++||+++.|+||||+.+|+.|++.++++++|+++|+|||||+
T Consensus 161 ~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~ 236 (456)
T cd07110 161 LTELEL----AEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPI 236 (456)
T ss_pred HHHHHH----HHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCee
Confidence 999876 4557899999999999999 66789999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHH
Q 010506 274 IIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEK 353 (508)
Q Consensus 274 iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~ 353 (508)
||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++++
T Consensus 237 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~ 316 (456)
T cd07110 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLS 316 (456)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCeEeeCCcccC--CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEec
Q 010506 354 GIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (508)
Q Consensus 354 ~v~~a~~~ga~v~~gg~~~~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s 430 (508)
++++++.+|+++++||...+ ..|+|++|||+ ++++++.++++|+||||++|++|+|.+|||+++|+++|||+++|||
T Consensus 317 ~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t 396 (456)
T cd07110 317 FIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVIS 396 (456)
T ss_pred HHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999997643 46899999987 6889999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 431 RSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 431 ~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
+|.+.+++++ .++++|+|+||+++. ..+.+||||+|.||+|+++|++++++|++.|+++
T Consensus 397 ~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 397 RDAERCDRVA--EALEAGIVWINCSQP-CFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred CCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 9999999999 789999999998643 4567899999999999999999999999999885
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-93 Score=756.62 Aligned_cols=480 Identities=27% Similarity=0.419 Sum_probs=437.9
Q ss_pred hhhhhcCCCCCCCCceecCEEecCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHH
Q 010506 9 EFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQI 87 (508)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~ 87 (508)
+.|..++.+....--||+|+|..++++++++||+| |+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++
T Consensus 21 ~~~~~~~~~~~~~~p~i~g~~~~~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 100 (518)
T cd07125 21 DALKAFDEKEWEAIPIINGEETETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKA 100 (518)
T ss_pred HHHHHhhhcCcccCceECCEEeeCCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 66777776655566689999986788999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCc
Q 010506 88 GDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFP 167 (508)
Q Consensus 88 a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 167 (508)
++.|++++++|++++++|+|||+.+++.|+...++.+++++...+...+........+...+.+++|+|||++|+|||||
T Consensus 101 a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P 180 (518)
T cd07125 101 ADLLEANRGELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFP 180 (518)
T ss_pred HHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchH
Confidence 99999999999999999999999999999999999999998877664432211122234557789999999999999999
Q ss_pred hhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCH
Q 010506 168 CAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGST 246 (508)
Q Consensus 168 ~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~ 246 (508)
+.+.++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.+..|+.|+++|.|+||||+
T Consensus 181 ~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l----~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~ 256 (518)
T cd07125 181 LAIFTGQIAAALAAGNTVIAKPAEQTPLIAARA----VELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGST 256 (518)
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHH----HHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCH
Confidence 999999999999999999999999999999876 5567899999999999998 45688999999999999999999
Q ss_pred HHHHHHHHHhhhc---cCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHh
Q 010506 247 KVGLMVQQTVHQR---FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323 (508)
Q Consensus 247 ~~g~~i~~~a~~~---~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~ 323 (508)
.+|+.|++.++++ ++|+++|+|||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++
T Consensus 257 ~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~ 336 (518)
T cd07125 257 ETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGA 336 (518)
T ss_pred HHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHH
Confidence 9999999998865 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCccccccccccee
Q 010506 324 YKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVL 402 (508)
Q Consensus 324 ~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl 402 (508)
++++++|+|.++++++||+++..+++++.++++++.. ++++++||...+.+|+|++|||+ ++ ++.+++||+||||+
T Consensus 337 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl 413 (518)
T cd07125 337 MASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPIL 413 (518)
T ss_pred HhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeE
Confidence 9999999999999999999999999999999999987 47899998753236999999988 45 89999999999999
Q ss_pred EeEEeC--CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCC-CCCCCccCCCCCCCCC-cch
Q 010506 403 YVMKFQ--TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGA-EIGGAFGGEKATGGGR-EAG 478 (508)
Q Consensus 403 ~v~~~~--~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfGG~~~SG~g~-~~g 478 (508)
+|++|+ |++|||+++|+++|||++||||+|.+.+++++ .++++|+|+||+++... .+.+||||+|.||+|+ .+|
T Consensus 414 ~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~--~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg 491 (518)
T cd07125 414 HVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWR--ERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGG 491 (518)
T ss_pred EEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHH--HhCCcCeEEECCCCCCCCCCCCCCCCcccccCCccccc
Confidence 999999 99999999999999999999999999999999 88999999999875543 3468999999999995 678
Q ss_pred HHHHHHhhheeEEEEeCCC
Q 010506 479 SDSWKQYMRRSTCTINYGN 497 (508)
Q Consensus 479 ~~~~~~~~~~k~v~~~~~~ 497 (508)
.+++++||+.|++++++.+
T Consensus 492 ~~~~~~ft~~k~i~~~~~~ 510 (518)
T cd07125 492 PNYLLRFGNEKTVSLNTTA 510 (518)
T ss_pred HHHHHHhcceEEEEEEccc
Confidence 9999999999999998853
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-93 Score=760.59 Aligned_cols=469 Identities=27% Similarity=0.429 Sum_probs=431.0
Q ss_pred CCCCceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHH
Q 010506 19 ETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (508)
Q Consensus 19 ~~~~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (508)
..+...|.|.|-.++.+++++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~el 96 (524)
T PRK09407 17 ERLRRLTARVDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREEL 96 (524)
T ss_pred HHHHHHHhhcCCCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 34555677777778889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcc-cCCCC-CceeEEEEeecceEEEEeCCCCchhhhHHHHH
Q 010506 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI-PSERP-NHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (508)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 176 (508)
+++++.|+|||+.++..|+...++.+++++...+...+... ..... ....+..++|+|||++|+|||||+.+.+++++
T Consensus 97 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~ 176 (524)
T PRK09407 97 LDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAI 176 (524)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHH
Confidence 99999999999999999999999999999887765433221 11111 23567789999999999999999999999999
Q ss_pred HHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHH
Q 010506 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (508)
Q Consensus 177 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (508)
+||++||+||+|||+.+|.++..++ +++.++|+|+|++|+|+| +.+.++.|++| ++.|+||||+.+|+.|++.
T Consensus 177 ~ALaaGN~VIlKPs~~tp~~~~~l~----~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~ 250 (524)
T PRK09407 177 PALLAGNAVVLKPDSQTPLTALAAV----ELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQ 250 (524)
T ss_pred HHHHcCCEEEEECCCCCHHHHHHHH----HHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHH
Confidence 9999999999999999999998764 557899999999999999 67888999876 7899999999999999999
Q ss_pred hhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCC
Q 010506 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEK 335 (508)
Q Consensus 256 a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~ 335 (508)
++++.+|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++
T Consensus 251 aa~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 330 (524)
T PRK09407 251 AGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDY 330 (524)
T ss_pred HHhcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHH
Q 010506 336 GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (508)
Q Consensus 336 ~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~-~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 413 (508)
++++||+++.++++++.+++++++++|+++++||.... .+|+|++|||+ ++++++.+++||+||||++|++|+|++||
T Consensus 331 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~dea 410 (524)
T PRK09407 331 SADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEA 410 (524)
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHH
Confidence 99999999999999999999999999999999997532 35899999987 68889999999999999999999999999
Q ss_pred HHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCC--CCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 414 VKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNG--AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 414 i~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~--~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|+++|+++|||++||||+|.+.+++++ .++++|.|+||++... ..+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 411 i~~~N~~~~gLsa~V~t~d~~~a~~~~--~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v 488 (524)
T PRK09407 411 VERANDTPYGLNASVWTGDTARGRAIA--ARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTI 488 (524)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEE
Confidence 999999999999999999999999999 7899999999986542 345689999999999999999999999999999
Q ss_pred EEeC
Q 010506 492 TINY 495 (508)
Q Consensus 492 ~~~~ 495 (508)
++++
T Consensus 489 ~~~~ 492 (524)
T PRK09407 489 ATQR 492 (524)
T ss_pred EEcc
Confidence 8875
|
|
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-94 Score=749.69 Aligned_cols=447 Identities=29% Similarity=0.451 Sum_probs=417.4
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH--hccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh
Q 010506 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (508)
Q Consensus 38 v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (508)
++||+||+++++++.++.+|++++++.|++||+. |+. +..+|.++|+++++.|++++++|+++++.|+|||..+++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 4799999999999999999999999999999985 998 8999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChh
Q 010506 116 EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195 (508)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~ 195 (508)
|+...++.+++++...+...+..... .++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 80 Ev~~~i~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 80 EISGAISELRYYAGLARTEAGRMIEP-EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 99999999999998877765543322 23445678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeE
Q 010506 196 ITIAITKLVSEVFER-NKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAI 273 (508)
Q Consensus 196 ~~~~l~~~l~~~l~~-aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~ 273 (508)
++..+ .++|.+ +|+|+|++|+|+| +.+.++.|++||+++.|+||||+.+|+.|++.++++++|+++|+|||||+
T Consensus 159 ~~~~l----~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~ 234 (455)
T cd07120 159 INAAI----IRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPC 234 (455)
T ss_pred HHHHH----HHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCee
Confidence 99876 455677 7999999999998 67789999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHH
Q 010506 274 IIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEK 353 (508)
Q Consensus 274 iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~ 353 (508)
||++|+|++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++++
T Consensus 235 IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~ 314 (455)
T cd07120 235 IVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDR 314 (455)
T ss_pred EECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCeEeeCCcccCC---CCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEe
Q 010506 354 GIENIKSQGGKILTGGSVIES---EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429 (508)
Q Consensus 354 ~v~~a~~~ga~v~~gg~~~~~---~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~ 429 (508)
++++++++|+++++||...+. +|+|++|||+ ++++++.++++|+||||++|++|+|+||||+++|+++|||+++||
T Consensus 315 ~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~if 394 (455)
T cd07120 315 MVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVW 394 (455)
T ss_pred HHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEE
Confidence 999999999999998764332 6899999987 688899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010506 430 TRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 430 s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
|+|.+.+++++ .++++|+|+||++.. ..+..||||+|.||+|+++|++++++||+.|++++
T Consensus 395 t~d~~~a~~~~--~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~~ 455 (455)
T cd07120 395 TRDLARAMRVA--RAIRAGTVWINDWNK-LFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL 455 (455)
T ss_pred cCCHHHHHHHH--HhcCcceEEECCCCC-CCCCCCcCCccccccCccchHHHHHHHhceeEEeC
Confidence 99999999999 789999999999754 34578999999999999999999999999999863
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-93 Score=750.37 Aligned_cols=450 Identities=31% Similarity=0.559 Sum_probs=422.0
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhH
Q 010506 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117 (508)
Q Consensus 38 v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 117 (508)
++||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARVDI 80 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHH
Q 010506 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197 (508)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~ 197 (508)
..+++.+++++...+.+.++..+.. .+...+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~ 159 (457)
T cd07090 81 DSSADCLEYYAGLAPTLSGEHVPLP-GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHhCCeeeccC-CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHH
Confidence 9999999999988777654433222 244567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcC
Q 010506 198 IAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD 277 (508)
Q Consensus 198 ~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~ 277 (508)
..+ .+++.++|+|+|++|+|+|+.+.++.|+.|+++++|+||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus 160 ~~l----~~~~~~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~ 235 (457)
T cd07090 160 LLL----AEILTEAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFD 235 (457)
T ss_pred HHH----HHHHHHcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECC
Confidence 876 5556789999999999998667899999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHH
Q 010506 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN 357 (508)
Q Consensus 278 daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~ 357 (508)
|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++.++++++.+++++
T Consensus 236 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 315 (457)
T cd07090 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIES 315 (457)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCeEeeCCcccC-----CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecC
Q 010506 358 IKSQGGKILTGGSVIE-----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431 (508)
Q Consensus 358 a~~~ga~v~~gg~~~~-----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~ 431 (508)
++++|+++++||...+ .+|+|++|||+ +++++++++++|+||||++|++|+|.||||+++|+++|||+++|||+
T Consensus 316 a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~ 395 (457)
T cd07090 316 AKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTR 395 (457)
T ss_pred HHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcC
Confidence 9999999999997632 25899999988 68899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010506 432 SPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 432 d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
|.+.+++++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+.|++++++
T Consensus 396 d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~~ 456 (457)
T cd07090 396 DLQRAHRVI--AQLQAGTCWINTYNI-SPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVEM 456 (457)
T ss_pred CHHHHHHHH--HhCCcCeEEECCCCC-CCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEeC
Confidence 999999999 889999999998643 4467899999999999999999999999999998875
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-93 Score=749.64 Aligned_cols=447 Identities=30% Similarity=0.520 Sum_probs=419.1
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH--hccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhh
Q 010506 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGE 116 (508)
Q Consensus 39 ~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 116 (508)
+||+||+++++++.++.+|+++++++|++|++. |+++|.++|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 81 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARGE 81 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 599999999999999999999999999999985 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhH
Q 010506 117 VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196 (508)
Q Consensus 117 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~ 196 (508)
+...++.+++++...+.+.+...+....+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 82 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~ 161 (454)
T cd07118 82 IEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGT 161 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 99999999999987766654433322233455778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEE
Q 010506 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (508)
Q Consensus 197 ~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV 275 (508)
+..+ .+++.++|+|+|++|+|+| +.+.++.|+.|++++.|.||||+++|+.|++.++++++++++|+|||||+||
T Consensus 162 ~~~l----~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV 237 (454)
T cd07118 162 TLML----AELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIV 237 (454)
T ss_pred HHHH----HHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEE
Confidence 9876 5567889999999999998 5678999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHH
Q 010506 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (508)
Q Consensus 276 ~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (508)
++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.+++
T Consensus 238 ~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i 317 (454)
T cd07118 238 FADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYV 317 (454)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCeEeeCCcccC-CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCH
Q 010506 356 ENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433 (508)
Q Consensus 356 ~~a~~~ga~v~~gg~~~~-~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~ 433 (508)
++++++|+++++||...+ ..|+|++|||+ ++++++.+++||+||||++|++|+|++|||+++|+++|||++||||+|.
T Consensus 318 ~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~ 397 (454)
T cd07118 318 DAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDI 397 (454)
T ss_pred HHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCH
Confidence 999999999999998744 46899999988 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 434 ENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 434 ~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
+.+++++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 398 ~~~~~~~--~~l~~g~v~iN~~~~-~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 398 DTALTVA--RRIRAGTVWVNTFLD-GSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHHHHH--HhcCcCEEEECCCCC-CCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 9999999 789999999999754 4567899999999999999999999999999885
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-93 Score=752.55 Aligned_cols=458 Identities=24% Similarity=0.346 Sum_probs=410.3
Q ss_pred CceecCEEec-CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHH-hHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010506 22 GCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-SKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 22 ~~~i~g~~~~-~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
.+||||+|+. ++.+++++||+||+++++++.++ +|+++|+++|++| |+.|+.+|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~I~g~~~~~~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la 80 (513)
T cd07128 2 QSYVAGQWHAGTGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLY 80 (513)
T ss_pred ceeECCEEEcCCCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999984 45789999999999999999876 8999999999997 7999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcC--------CcccCCCCC-ceeEEEEee-cceEEEEeCCCCchh
Q 010506 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG--------SVIPSERPN-HMMLETWNP-LGVVGVITAFNFPCA 169 (508)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~P-~GVv~~i~p~n~P~~ 169 (508)
++ +.|+|||+.+++.|+...++.++|++...+...+ +..+...+. ...+..++| +|||++|+|||||+.
T Consensus 81 ~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~ 159 (513)
T cd07128 81 AL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVW 159 (513)
T ss_pred HH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHHH
Confidence 96 9999999999999999999999999988765432 111111111 124567899 599999999999999
Q ss_pred hhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCC-CCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHH
Q 010506 170 VLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK-LPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTK 247 (508)
Q Consensus 170 ~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aG-lP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~ 247 (508)
+.++++++||++||+||+|||+.+|+++..+ .+++.++| +|+|++|+|+| +.+.++.| +.+|.|+||||++
T Consensus 160 ~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l----~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~ 232 (513)
T cd07128 160 GMLEKFAPALLAGVPVIVKPATATAYLTEAV----VKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA 232 (513)
T ss_pred HHHHHHHHHHHcCCEEEEECCCCCCHHHHHH----HHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence 9999999999999999999999999999876 45678999 99999999998 33333332 5789999999999
Q ss_pred HHHHHHHHh--hhccCceeeccCccCeEEEcCCCC-----HHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHH
Q 010506 248 VGLMVQQTV--HQRFGKCLLELSGNNAIIIMDDAD-----IKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320 (508)
Q Consensus 248 ~g~~i~~~a--~~~~~~~~~elgG~~~~iV~~daD-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L 320 (508)
+|+.|++.+ +++++|+++|+|||||+||++||| ++.+++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 233 ~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l 312 (513)
T cd07128 233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEAL 312 (513)
T ss_pred HHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHH
Confidence 999999985 478999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-------CCCCceeccEEE-ecCC--CC
Q 010506 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI-------ESEGNFVQPTIV-EISP--TA 390 (508)
Q Consensus 321 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~-------~~~g~~~~Ptv~-~~~~--~~ 390 (508)
+++++++++|+|.++++++||+++..+++++.++|+++++. +++++||... ..+|+|++|||+ ++++ ++
T Consensus 313 ~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 391 (513)
T cd07128 313 KARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAAT 391 (513)
T ss_pred HHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccc
Confidence 99999999999999999999999999999999999999988 9999999652 135899999988 5665 47
Q ss_pred cccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcc--eeEEEEcCCCC--------CCC
Q 010506 391 DIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSD--TGIVNVNIPTN--------GAE 460 (508)
Q Consensus 391 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~--~g~V~iN~~~~--------~~~ 460 (508)
.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++ .+++ +|+||||.... ...
T Consensus 392 ~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~--~~l~~~~G~v~IN~~~~~~~~~~~~~~~ 469 (513)
T cd07128 392 AVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELV--LGAAPYHGRLLVLNRDSAKESTGHGSPL 469 (513)
T ss_pred hHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHH--HHHHhhCCEEEEcCCccccccccccCCC
Confidence 89999999999999999999999999999999999999999999999999 6776 99999998542 224
Q ss_pred CCCCccCCCCCCCCCcc-hHHHHHHhhheeEE
Q 010506 461 IGGAFGGEKATGGGREA-GSDSWKQYMRRSTC 491 (508)
Q Consensus 461 ~~~pfGG~~~SG~g~~~-g~~~~~~~~~~k~v 491 (508)
+.+||||+|.||+|+++ |.+++++|++.|++
T Consensus 470 ~~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v 501 (513)
T cd07128 470 PQLVHGGPGRAGGGEELGGLRGVKHYMQRTAV 501 (513)
T ss_pred CCCCCCCcccCCCCcccccHHHHHHhheeeee
Confidence 56899999999999995 79999999999987
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-93 Score=749.66 Aligned_cols=448 Identities=31% Similarity=0.547 Sum_probs=419.3
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhc-cCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhh
Q 010506 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWM-ELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGE 116 (508)
Q Consensus 38 v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 116 (508)
++||+||+++++++.++.+|+++++++|++|++.|. .+|.++|.++|+++++.|++++++|+++++.|+|||..+++.|
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 80 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARAD 80 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 479999999999999999999999999999999877 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhH
Q 010506 117 VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196 (508)
Q Consensus 117 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~ 196 (508)
+...++.+++++...+...+...+.. ++...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 81 v~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 159 (454)
T cd07109 81 VEAAARYFEYYGGAADKLHGETIPLG-PGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLT 159 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 99999999999888776655433322 34456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEE
Q 010506 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (508)
Q Consensus 197 ~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV 275 (508)
+..+ .+++.++|+|+|++|+|+| +.+.++.|++||++|.|+||||+.+|+.|++.++++++|+++|+|||||+||
T Consensus 160 ~~~l----~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV 235 (454)
T cd07109 160 ALRL----AELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIV 235 (454)
T ss_pred HHHH----HHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEE
Confidence 9876 4667899999999999998 7788999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHH
Q 010506 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (508)
Q Consensus 276 ~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (508)
++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+ .+++||+++.++++++.+++
T Consensus 236 ~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i 314 (454)
T cd07109 236 FADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFV 314 (454)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999986 68999999999999999999
Q ss_pred HHHHHCCCeEeeCCcccC---CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecC
Q 010506 356 ENIKSQGGKILTGGSVIE---SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431 (508)
Q Consensus 356 ~~a~~~ga~v~~gg~~~~---~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~ 431 (508)
++++++|+++++||.... ..|+|++|||+ ++++++.+++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 315 ~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~ 394 (454)
T cd07109 315 ARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTR 394 (454)
T ss_pred HHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECC
Confidence 999999999999987532 36899999987 68899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010506 432 SPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 432 d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
|.+.+++++ .++++|+|+||+......+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus 395 d~~~~~~~~--~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~~ 454 (454)
T cd07109 395 DGDRALRVA--RRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVAV 454 (454)
T ss_pred CHHHHHHHH--HhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEeC
Confidence 999999999 789999999998763455678999999999999999999999999998863
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-93 Score=744.56 Aligned_cols=444 Identities=32% Similarity=0.524 Sum_probs=415.1
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhH
Q 010506 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117 (508)
Q Consensus 38 v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 117 (508)
++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQFEV 80 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHH
Q 010506 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197 (508)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~ 197 (508)
..+++.+++++..... ...... .++...+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~~--~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~ 157 (446)
T cd07106 81 GGAVAWLRYTASLDLP--DEVIED-DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCT 157 (446)
T ss_pred HHHHHHHHHHHhhhhc--CccccC-CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 9999999998876531 222221 2344567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcC
Q 010506 198 IAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD 277 (508)
Q Consensus 198 ~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~ 277 (508)
..+++++ .+ ++|+|++|+++|+.+.++.|++|+++|.|+||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus 158 ~~l~~~~----~~-~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~ 232 (446)
T cd07106 158 LKLGELA----QE-VLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLP 232 (446)
T ss_pred HHHHHHH----HH-hCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECC
Confidence 9876654 44 399999999998767889999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHH
Q 010506 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN 357 (508)
Q Consensus 278 daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~ 357 (508)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.+++++
T Consensus 233 dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~ 312 (446)
T cd07106 233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVED 312 (446)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHH
Q 010506 358 IKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENI 436 (508)
Q Consensus 358 a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~ 436 (508)
+..+|+++++||...+..|+|++|||+ ++++++.++++|+||||++|++|+|++|||+++|+++|||++||||+|.+.+
T Consensus 313 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~ 392 (446)
T cd07106 313 AKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERA 392 (446)
T ss_pred HHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 999999999999865456899999988 6889999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 437 FKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 437 ~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
++++ .++++|+|+||+++ ...+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 393 ~~~~--~~~~~G~v~iN~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 393 EAVA--RRLEAGTVWINTHG-ALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred HHHH--HhCCccEEEECCCC-CCCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 9999 88999999999976 45577899999999999999999999999999885
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-93 Score=745.51 Aligned_cols=448 Identities=30% Similarity=0.496 Sum_probs=417.8
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhc-cCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-h
Q 010506 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWM-ELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-G 115 (508)
Q Consensus 38 v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ 115 (508)
++||+||+++++++.++.+|+++++++|++|++.|+ ++|..+|.++|+++++.|+++.++|+++++.|+|||+.++. .
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 80 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM 80 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 479999999999999999999999999999999999 99999999999999999999999999999999999998775 5
Q ss_pred hHHHHHHHHHHHhhhhhhhcCCcc-cCC---CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCC
Q 010506 116 EVQEVIDMCDFAVGLSRQLNGSVI-PSE---RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (508)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 191 (508)
|+...++.+++++...+...++.. +.. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 160 (459)
T cd07089 81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP 160 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999988776544331 211 1234567889999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCcc
Q 010506 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGN 270 (508)
Q Consensus 192 ~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~ 270 (508)
.+|.++..+ .+++.++|+|+|++|+|+| +.+.+..|+.||+++.|.||||+.+|+.|++.++++++|+++|+|||
T Consensus 161 ~~p~~~~~l----~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~ 236 (459)
T cd07089 161 DTPLSALLL----GEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGK 236 (459)
T ss_pred CChHHHHHH----HHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCC
Confidence 999999876 5567789999999999999 66689999999999999999999999999999999999999999999
Q ss_pred CeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHH
Q 010506 271 NAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKN 350 (508)
Q Consensus 271 ~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 350 (508)
||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+.++
T Consensus 237 n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~ 316 (459)
T cd07089 237 SANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDR 316 (459)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCeEeeCCcccC--CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEE
Q 010506 351 FEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSS 427 (508)
Q Consensus 351 ~~~~v~~a~~~ga~v~~gg~~~~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~s 427 (508)
+++++++++++|+++++||...+ .+|+|++|||+ ++++++++++||+||||++|++|+|+||||+++|+++|||+++
T Consensus 317 v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~ 396 (459)
T cd07089 317 VEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGG 396 (459)
T ss_pred HHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEE
Confidence 99999999999999999997643 36899999987 7889999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 428 IFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 428 i~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
|||+|.+.+++++ .++++|+|+||+.+ ..++..||||+|.||+|+++|.+++++||+.|+++
T Consensus 397 v~t~d~~~~~~~~--~~~~~G~v~iN~~~-~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 397 VWSADVDRAYRVA--RRIRTGSVGINGGG-GYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred EEcCCHHHHHHHH--HhcCcCeEEECCCC-CCCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence 9999999999999 78999999999876 45567899999999999999999999999999885
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-93 Score=741.55 Aligned_cols=430 Identities=20% Similarity=0.251 Sum_probs=394.8
Q ss_pred CHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh-hHHHHHHHHHHHhhhhh
Q 010506 54 SLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSR 132 (508)
Q Consensus 54 ~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~ 132 (508)
...|+++++++|++||+.|+.++.++|.++|+++++.|++|+++|+++++.|+|||..+++. |+...++.++|+++..+
T Consensus 8 ~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~~ 87 (484)
T PLN02174 8 GAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLK 87 (484)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56799999999999999999999999999999999999999999999999999999999875 99999999999998776
Q ss_pred hhcCCc---ccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHH
Q 010506 133 QLNGSV---IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFE 209 (508)
Q Consensus 133 ~~~~~~---~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~ 209 (508)
...+.. ..........++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++ ++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~----l~~ 163 (484)
T PLN02174 88 NWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAK----LLE 163 (484)
T ss_pred HHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHH----HHH
Confidence 544311 1111123345788999999999999999999999999999999999999999999999987755 456
Q ss_pred hCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHH
Q 010506 210 RNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVL 289 (508)
Q Consensus 210 ~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~ 289 (508)
+ ++|+|++|+|+|+.+.+..|++ +++|+|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.++
T Consensus 164 ~-~lp~gvv~vv~G~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~ 241 (484)
T PLN02174 164 Q-YLDSSAVRVVEGAVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRII 241 (484)
T ss_pred H-hCCCCEEEEEECChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHH
Confidence 6 6999999999986666777886 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH-hhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeC
Q 010506 290 FAAV-GTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTG 368 (508)
Q Consensus 290 ~~~~-~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~g 368 (508)
+++| .|+||.|++++|||||+++||+|+++|+++++++++|+|.+ ++++||+++..+++++.++|+++ .+|+++++|
T Consensus 242 ~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~G 319 (484)
T PLN02174 242 AGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYG 319 (484)
T ss_pred HHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEEC
Confidence 9999 59999999999999999999999999999999999999988 88999999999999999999997 789999999
Q ss_pred CcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcce
Q 010506 369 GSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDT 447 (508)
Q Consensus 369 g~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~ 447 (508)
|.. +.+|+|++|||+ +++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++ .++++
T Consensus 320 G~~-~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~--~~l~a 396 (484)
T PLN02174 320 GEK-DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFA--ATVSA 396 (484)
T ss_pred CCc-CCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHH--HcCCc
Confidence 976 446999999987 79999999999999999999999999999999999999999999999999999999 78999
Q ss_pred eEEEEcCCCCCC-CCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEe
Q 010506 448 GIVNVNIPTNGA-EIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 448 g~V~iN~~~~~~-~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 494 (508)
|.|+||+..... .+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 397 G~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 444 (484)
T PLN02174 397 GGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 444 (484)
T ss_pred ceEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEEC
Confidence 999999865432 35689999999999999999999999999999876
|
|
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-92 Score=743.46 Aligned_cols=449 Identities=32% Similarity=0.549 Sum_probs=420.1
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hhH
Q 010506 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEV 117 (508)
Q Consensus 39 ~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev 117 (508)
+||.||+++++++.++.+++++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev 81 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV 81 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999999997 599
Q ss_pred HHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHH
Q 010506 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197 (508)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~ 197 (508)
..+++.+++++.+.+...+...+.. .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 82 ~~~i~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~ 160 (453)
T cd07115 82 PRAADTFRYYAGWADKIEGEVIPVR-GPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA 160 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHH
Confidence 9999999999887766654433222 344567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEc
Q 010506 198 IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIM 276 (508)
Q Consensus 198 ~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~ 276 (508)
..++ +++.++|+|+|++++|+| +.+.++.|+.||++|.|+||||+.+|+.|++.++++++|+++|+|||||+||+
T Consensus 161 ~~l~----~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~ 236 (453)
T cd07115 161 LRIA----ELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVF 236 (453)
T ss_pred HHHH----HHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEEC
Confidence 8764 556889999999999998 66788999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHH
Q 010506 277 DDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE 356 (508)
Q Consensus 277 ~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~ 356 (508)
+|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++++
T Consensus 237 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 316 (453)
T cd07115 237 ADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVD 316 (453)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHH
Q 010506 357 NIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435 (508)
Q Consensus 357 ~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~ 435 (508)
++.++|+++++||...+..|+|++|||+ ++++++++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.
T Consensus 317 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~ 396 (453)
T cd07115 317 VGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGR 396 (453)
T ss_pred HHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHH
Confidence 9999999999999764446899999988 678899999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010506 436 IFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 436 ~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
+++++ .++++|+|+||+.. ...+.+||||+|.||+|+++|.+++++|++.|++++++
T Consensus 397 ~~~~~--~~l~~G~v~iN~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~~ 453 (453)
T cd07115 397 AHRVA--AALKAGTVWINTYN-RFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVNL 453 (453)
T ss_pred HHHHH--HhcCccEEEECCCC-CCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEeC
Confidence 99999 78999999999854 34567899999999999999999999999999998753
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-92 Score=743.38 Aligned_cols=447 Identities=27% Similarity=0.450 Sum_probs=413.4
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHH
Q 010506 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQ 118 (508)
Q Consensus 39 ~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~ 118 (508)
.||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++.|+.
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~ev~ 80 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEEVL 80 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhcCCc-ccCCCC-CceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhH
Q 010506 119 EVIDMCDFAVGLSRQLNGSV-IPSERP-NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196 (508)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~ 196 (508)
..++.+++++...+...... .....+ ....+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~ 160 (454)
T cd07101 81 DVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALT 160 (454)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 99999999988766543322 111111 2355778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEE
Q 010506 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (508)
Q Consensus 197 ~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV 275 (508)
+..+ .+++.++|+|+|++|+|+| +.+.+..|++| ++.|.||||+.+|+.|++.++++++|+++|+|||||+||
T Consensus 161 ~~~l----~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV 234 (454)
T cd07101 161 ALWA----VELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIV 234 (454)
T ss_pred HHHH----HHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEE
Confidence 9876 5567889999999999999 77888999986 578999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHH
Q 010506 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (508)
Q Consensus 276 ~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (508)
++|||++.|++.|++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+++++.+++
T Consensus 235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v 314 (454)
T cd07101 235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHV 314 (454)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCeEeeCCcccC-CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCH
Q 010506 356 ENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433 (508)
Q Consensus 356 ~~a~~~ga~v~~gg~~~~-~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~ 433 (508)
++++++|+++++||...+ .+|+|++|||+ ++++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 315 ~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 394 (454)
T cd07101 315 DDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDG 394 (454)
T ss_pred HHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 999999999999987532 35899999987 6889999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCcceeEEEEcCCCCC--CCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010506 434 ENIFKWLGPHGSDTGIVNVNIPTNG--AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 434 ~~~~~~~~~~~~~~g~V~iN~~~~~--~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
+++.+++ .++++|+|+||++... .++.+||||+|.||+|+++|.+++++|++.|++++
T Consensus 395 ~~a~~~~--~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (454)
T cd07101 395 ARGRRIA--ARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454 (454)
T ss_pred HHHHHHH--HhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEeC
Confidence 9999999 7899999999986542 34568999999999999999999999999999863
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-94 Score=755.78 Aligned_cols=456 Identities=34% Similarity=0.608 Sum_probs=424.8
Q ss_pred Ee-cCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Q 010506 29 WK-AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMG 107 (508)
Q Consensus 29 ~~-~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~G 107 (508)
|+ ..+++++++||.||+++++++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|+++.++|++++++|+|
T Consensus 1 w~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~G 80 (462)
T PF00171_consen 1 WVSSESETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETG 80 (462)
T ss_dssp EEE-TSSEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred CcCCCCCEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhcccccccccccccc
Confidence 66 34578999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEe
Q 010506 108 KILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVW 187 (508)
Q Consensus 108 k~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVl 187 (508)
||+.+++.|+..+++.+++++...+.+.+...+. ..+...+..++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 81 k~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVl 159 (462)
T PF00171_consen 81 KPIAEARGEVDRAIDFLRYYADAARKLAGEVLPS-DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVL 159 (462)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEE-STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEE
T ss_pred cccccccchhhhhhhhhhhhhhcccceehhhccc-ccccccccccccccceeecccccccccccccchhhhhccccccee
Confidence 9999999999999999999999888876655444 356678889999999999999999999999999999999999999
Q ss_pred eCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeec
Q 010506 188 KGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLE 266 (508)
Q Consensus 188 kps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~e 266 (508)
|||+.+|.++..+ .+++.++|+|+|++|+++| +.+.+..|++||+++.|+||||+++|+.|++.++++++|+++|
T Consensus 160 kps~~~~~~~~~l----~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~le 235 (462)
T PF00171_consen 160 KPSEQAPLTALLL----AELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLE 235 (462)
T ss_dssp EEBTTSHHHHHHH----HHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEE
T ss_pred eeccccccccccc----hhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccccccccccc
Confidence 9999999999876 4556778999999999999 8899999999999999999999999999999999999999999
Q ss_pred cCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHH
Q 010506 267 LSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPE 346 (508)
Q Consensus 267 lgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~ 346 (508)
+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..
T Consensus 236 lgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~ 315 (462)
T PF00171_consen 236 LGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKA 315 (462)
T ss_dssp ECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHH
T ss_pred ccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCeEeeCC---cccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCC
Q 010506 347 SRKNFEKGIENIKSQGGKILTGG---SVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422 (508)
Q Consensus 347 ~~~~~~~~v~~a~~~ga~v~~gg---~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 422 (508)
+++++.+++++++.+|+++++|| ......|+|++|||+ +++++++++++|+||||++|++|+|++|||+++|+++|
T Consensus 316 ~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 395 (462)
T PF00171_consen 316 QRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEY 395 (462)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSE
T ss_pred hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCC
Confidence 99999999999999999999999 233468999999988 68999999999999999999999999999999999999
Q ss_pred CcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 423 GLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 423 gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
||+++|||+|.+.+++++ .++++|+|+||.++......+||||+|.||+|+++|.+++++|++.|+|
T Consensus 396 gl~a~v~s~d~~~~~~~~--~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 396 GLTASVFSRDESRAERLA--RRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp ESEEEEECSBHHHHHHHH--HHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred CceeEEeccccccccccc--ccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 999999999999999999 8899999999998665544479999999999999999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-92 Score=744.11 Aligned_cols=446 Identities=29% Similarity=0.492 Sum_probs=417.3
Q ss_pred EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh
Q 010506 36 VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (508)
Q Consensus 36 ~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (508)
++++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|.++.++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 80 (453)
T cd07094 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARV 80 (453)
T ss_pred CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhhhcCCcccCCC----CCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCC
Q 010506 116 EVQEVIDMCDFAVGLSRQLNGSVIPSER----PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (508)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 191 (508)
|+...++.+++++...+...++..+... .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~ 160 (453)
T cd07094 81 EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 9999999999998877766544332221 234566788999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCcc
Q 010506 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGN 270 (508)
Q Consensus 192 ~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~ 270 (508)
.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+++.|+||||+.+|+.|++.+ ..+|+++|+|||
T Consensus 161 ~~p~~~~~l~----~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk 234 (453)
T cd07094 161 KTPLSALELA----KILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGN 234 (453)
T ss_pred cchHHHHHHH----HHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCC
Confidence 9999998764 556788999999999998 567799999999999999999999999999988 589999999999
Q ss_pred CeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHH
Q 010506 271 NAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKN 350 (508)
Q Consensus 271 ~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 350 (508)
||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..++++
T Consensus 235 ~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 314 (453)
T cd07094 235 APVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAER 314 (453)
T ss_pred CceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEe
Q 010506 351 FEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429 (508)
Q Consensus 351 ~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~ 429 (508)
+.+++++++++|+++++||.. +|+|++|||+ +++++++++++|+||||++|++|+|++|||+++|+++|||++|||
T Consensus 315 ~~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~ 391 (453)
T cd07094 315 VERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIF 391 (453)
T ss_pred HHHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEE
Confidence 999999999999999999864 5889999988 688999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 430 TRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 430 s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
|+|.+++++++ .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 392 t~d~~~a~~~~--~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 392 TRDLNVAFKAA--EKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred CCCHHHHHHHH--HhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence 99999999999 78999999999986555567899999999999999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-92 Score=765.21 Aligned_cols=461 Identities=24% Similarity=0.341 Sum_probs=413.8
Q ss_pred CceecCEEec-CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHH-hHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010506 22 GCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-SKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 22 ~~~i~g~~~~-~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
.+||||+|+. .+.+++++||+||+++++++.++ .|+++|+++|++| ++.|+++|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela 80 (663)
T TIGR02278 2 QSYLSGEWRTGQGEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALY 80 (663)
T ss_pred ceeECCEEEcCCCCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999984 45789999999999999999999 6999999999996 9999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhc--------CCcccCCCCC-ceeEEEEeec-ceEEEEeCCCCchh
Q 010506 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN--------GSVIPSERPN-HMMLETWNPL-GVVGVITAFNFPCA 169 (508)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-GVv~~i~p~n~P~~ 169 (508)
+ ++.|+|||+.+++.|+..+++.+++++...+... ++..+...++ ...+..++|+ |||++|+|||||+.
T Consensus 81 ~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~ 159 (663)
T TIGR02278 81 A-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVW 159 (663)
T ss_pred H-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHHH
Confidence 9 5999999999999999999999999998776522 2222221112 2456789998 99999999999999
Q ss_pred hhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCC-CCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHH
Q 010506 170 VLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK-LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKV 248 (508)
Q Consensus 170 ~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aG-lP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~ 248 (508)
++++++++||++||+||+|||+.+|+++..+ .+++.++| +|+|++|+|+|+ .+..+..++.++.|+||||+++
T Consensus 160 ~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l----~~~~~~aG~lP~gv~~~v~g~--~~~~~~~~~~~~~V~FTGS~~~ 233 (663)
T TIGR02278 160 GLLEKFAPAFLAGVPTLAKPATPTAYVAEAL----VRTMVESGLLPEGSLQLICGS--AGDLLDHLDHRDVVAFTGSAAT 233 (663)
T ss_pred HHHHHHHHHHHcCCEEEEECCCcchHHHHHH----HHHHHHhCCCCCCcEEEEeCC--hHHHHhcCCCCCEEEEECCHHH
Confidence 9999999999999999999999999999876 45678899 999999999984 2233333477899999999999
Q ss_pred HHHHHHHh--hhccCceeeccCccCeEEEcCCCC-----HHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHH
Q 010506 249 GLMVQQTV--HQRFGKCLLELSGNNAIIIMDDAD-----IKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321 (508)
Q Consensus 249 g~~i~~~a--~~~~~~~~~elgG~~~~iV~~daD-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~ 321 (508)
|+.|++.+ +++++|+++|+|||||+||++||| ++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 234 G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~ 313 (663)
T TIGR02278 234 ADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQ 313 (663)
T ss_pred HHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHH
Confidence 99999874 478999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCC-ccccccccc
Q 010506 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTA-DIVKEELFA 399 (508)
Q Consensus 322 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~-~~~~~E~fg 399 (508)
++++++++|+|.++++++||+++..++++++++|++++++|+++++||.. +.+|+|++|||+ ++++++ .+++||+||
T Consensus 314 ~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~-~~~g~~~~PTvl~~~~~~~~~i~~eE~FG 392 (663)
T TIGR02278 314 ARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPG-RLDGAFFPPTLLLAEDPWAGAVHATEAFG 392 (663)
T ss_pred HHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc-CCCCeeEccEEEeeCCcchhhHHhccccC
Confidence 99999999999999999999999999999999999999999999999976 346899999988 577775 799999999
Q ss_pred ceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCc--ceeEEEE-cCCC-------CCCCCCCCccCCC
Q 010506 400 PVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGS--DTGIVNV-NIPT-------NGAEIGGAFGGEK 469 (508)
Q Consensus 400 Pvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~--~~g~V~i-N~~~-------~~~~~~~pfGG~~ 469 (508)
||++|++|+|.+|||+++|+++|||++||||+|.+.+++++ .++ ++|+||| |.+. ....+.+||||+|
T Consensus 393 PVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~--~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k 470 (663)
T TIGR02278 393 PVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFI--LGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPG 470 (663)
T ss_pred CeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHH--HHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999 667 8999999 7521 1223568999999
Q ss_pred CCCCCCcc-hHHHHHHhhheeEEEE
Q 010506 470 ATGGGREA-GSDSWKQYMRRSTCTI 493 (508)
Q Consensus 470 ~SG~g~~~-g~~~~~~~~~~k~v~~ 493 (508)
.||+|+++ |.+++++|++.|++..
T Consensus 471 ~SG~G~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 471 RAGGGEELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred cCcCCCccchHHHHHHhceeEEEEc
Confidence 99999994 6899999999998854
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-92 Score=743.62 Aligned_cols=447 Identities=30% Similarity=0.476 Sum_probs=415.5
Q ss_pred EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh
Q 010506 36 VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (508)
Q Consensus 36 ~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (508)
++++||+||+++++++.++.+++++++++|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG 80 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhhhcCCcccCC----CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCC
Q 010506 116 EVQEVIDMCDFAVGLSRQLNGSVIPSE----RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (508)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 191 (508)
|+..+++.+++++.......++..... ..+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~ 160 (452)
T cd07147 81 EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPAS 160 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999998887665443322211 1233456778999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccC
Q 010506 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271 (508)
Q Consensus 192 ~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~ 271 (508)
.+|.++..+ .++|.++|+|+|++|+++|+.+.+..|+.||++|.|+||||+.+|+.|++.++ .+|+++|+||||
T Consensus 161 ~~p~~~~~l----~~~l~~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~--~~~v~lelgG~~ 234 (452)
T cd07147 161 RTPLSALIL----GEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAG--KKKVVLELGGNA 234 (452)
T ss_pred CCcHHHHHH----HHHHHHcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhC--cCceEeecCCCC
Confidence 999999876 45577899999999999996678899999999999999999999999999876 479999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHH
Q 010506 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351 (508)
Q Consensus 272 ~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 351 (508)
|+||++|||++.|++.|++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 235 p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 314 (452)
T cd07147 235 AVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERV 314 (452)
T ss_pred cEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEec
Q 010506 352 EKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (508)
Q Consensus 352 ~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s 430 (508)
.+++++++++|+++++||.. +|+|++|||+ +++++++++++|+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 315 ~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t 391 (452)
T cd07147 315 EGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFT 391 (452)
T ss_pred HHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999999975 5899999988 6889999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010506 431 RSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 431 ~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
+|.+++++++ .++++|+|+||+.+......+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 392 ~d~~~a~~~~--~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 392 RDLEKALRAW--DELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred CCHHHHHHHH--HHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 9999999999 889999999998765555678999999999999999999999999999864
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-92 Score=744.12 Aligned_cols=457 Identities=28% Similarity=0.418 Sum_probs=421.5
Q ss_pred cCCCCCCCCceecCEEecCCCeEEeecCCCC-ceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHH
Q 010506 14 IGLSPETPGCFVNGKWKAHGPTVSSINPVNN-QKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALR 92 (508)
Q Consensus 14 ~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~g-~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~ 92 (508)
....+-.++.||||+|+.++.+++++||.|+ +++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|+
T Consensus 31 ~~~~~~~~~~~i~g~~~~~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~ 110 (500)
T TIGR01238 31 WADKTWQAAPIIGHSYKADGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLE 110 (500)
T ss_pred HhcCceecCceECCEEecCCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 3336668899999999876788999999996 799999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhH
Q 010506 93 EKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (508)
Q Consensus 93 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 172 (508)
+++++|++++++|+|||..+++.|+..+++.+++++...+...+. ..++|+|||++|+|||||+.+.+
T Consensus 111 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~~------------~~~~P~GVV~~I~pwN~P~~~~~ 178 (500)
T TIGR01238 111 LHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGE------------FSVESRGVFVCISPWNFPLAIFT 178 (500)
T ss_pred hHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCc------------eeccCcceEEEECCCchHHHHHH
Confidence 999999999999999999999999999999999998876543211 25889999999999999999999
Q ss_pred HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHH
Q 010506 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (508)
Q Consensus 173 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (508)
+++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||+++.|+||||+.+|+.
T Consensus 179 ~~i~~ALaaGN~VVlKps~~tp~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~ 254 (500)
T TIGR01238 179 GQISAALAAGNTVIAKPAEQTSLIAYRA----VELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQL 254 (500)
T ss_pred HHHHHHHHcCCEEEEeCCCCccHHHHHH----HHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHH
Confidence 9999999999999999999999998766 5667889999999999998 5688999999999999999999999999
Q ss_pred HHHHhhhcc---CceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcc
Q 010506 252 VQQTVHQRF---GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328 (508)
Q Consensus 252 i~~~a~~~~---~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~ 328 (508)
|++.++++. +|+++|+|||||+||++|||++.|++.|++|+|.|+||.|+++++||||++++|+|+++|++++++++
T Consensus 255 v~~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~ 334 (500)
T TIGR01238 255 INQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELK 334 (500)
T ss_pred HHHHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCC
Confidence 999999876 79999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCc---ccCCCCceeccEEEecCCCCcccccccccceeEeE
Q 010506 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGS---VIESEGNFVQPTIVEISPTADIVKEELFAPVLYVM 405 (508)
Q Consensus 329 ~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~---~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~ 405 (508)
+|+|.+++++|||++++.+++++.++++++.+.|++++.++. ....+|+|++|||+.. +++.++++|+||||++|+
T Consensus 335 vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~-~~~~~~~eE~FgPvl~v~ 413 (500)
T TIGR01238 335 VGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL-DDIAELSEEVFGPVLHVV 413 (500)
T ss_pred CCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc-CCchHhhCCCcCCEEEEE
Confidence 999999999999999999999999999999999998874332 2223699999999974 678899999999999999
Q ss_pred EeC--CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCC-CCCCccCCCCCCCC-CcchHHH
Q 010506 406 KFQ--TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAE-IGGAFGGEKATGGG-REAGSDS 481 (508)
Q Consensus 406 ~~~--~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~-~~~pfGG~~~SG~g-~~~g~~~ 481 (508)
+|+ +++|||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+...... ..+||||+|.||+| +.+|.++
T Consensus 414 ~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~--~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~ 491 (500)
T TIGR01238 414 RYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIE--KHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHY 491 (500)
T ss_pred EeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHH--HhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHH
Confidence 998 79999999999999999999999999999999 889999999998654333 34799999999999 8999999
Q ss_pred HHHhhhee
Q 010506 482 WKQYMRRS 489 (508)
Q Consensus 482 ~~~~~~~k 489 (508)
+++|++.|
T Consensus 492 ~~~~~~~k 499 (500)
T TIGR01238 492 LYRLTQVQ 499 (500)
T ss_pred HHHHHhhc
Confidence 99999987
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-92 Score=742.00 Aligned_cols=448 Identities=27% Similarity=0.446 Sum_probs=417.7
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHH
Q 010506 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQ 118 (508)
Q Consensus 39 ~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~ 118 (508)
+||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~ 80 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGGEIR 80 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHH
Q 010506 119 EVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198 (508)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~ 198 (508)
..++.+++++...+...+........+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~ 160 (452)
T cd07102 81 GMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGE 160 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 99999999988776554332222223334567899999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCC
Q 010506 199 AITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (508)
Q Consensus 199 ~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~d 278 (508)
.+ .++|+++|+|+|++|+|+|+.+.+..|+.||+++.|+||||+.+|+.|++.++++.+|+++|+|||||+||++|
T Consensus 161 ~l----~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~d 236 (452)
T cd07102 161 RF----AAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPD 236 (452)
T ss_pred HH----HHHHHhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCC
Confidence 65 66678999999999999995588999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHH
Q 010506 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENI 358 (508)
Q Consensus 279 aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a 358 (508)
||++.|++.+++|+|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++++++
T Consensus 237 ADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a 316 (452)
T cd07102 237 ADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADA 316 (452)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCeEeeCCccc---CCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHH
Q 010506 359 KSQGGKILTGGSVI---ESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434 (508)
Q Consensus 359 ~~~ga~v~~gg~~~---~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~ 434 (508)
+++|+++++||... +.+|+|++|||+ +++++++++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 317 ~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 396 (452)
T cd07102 317 IAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIA 396 (452)
T ss_pred HhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHH
Confidence 99999999999753 246899999988 68899999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010506 435 NIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 435 ~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
.+.+++ .++++|+|+||++. ..++..||||+|.||+|+++|.+++++|++.|++++
T Consensus 397 ~~~~~~--~~l~~G~v~iN~~~-~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 452 (452)
T cd07102 397 RAEALG--EQLETGTVFMNRCD-YLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYHL 452 (452)
T ss_pred HHHHHH--HHcCcceEEECCCC-CCCCCCCCCCccccccCccchHHHHHHHhceeEEeC
Confidence 999999 78999999999865 345678999999999999999999999999999853
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-92 Score=743.12 Aligned_cols=464 Identities=30% Similarity=0.516 Sum_probs=431.1
Q ss_pred CCceecCEEecC-CCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccC-ChhHHHHHHHHHHHHHHHhHHHH
Q 010506 21 PGCFVNGKWKAH-GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMEL-PAPKRGEVVRQIGDALREKLHHL 98 (508)
Q Consensus 21 ~~~~i~g~~~~~-~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~-~~~~R~~~L~~~a~~l~~~~~~l 98 (508)
+++||||+|+.+ +.+++++||+||+++++++.++.+|+++++++|++|++.|+.+ +.++|.++|+++++.|++++++|
T Consensus 2 ~~~~i~g~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el 81 (473)
T cd07082 2 FKYLINGEWKESSGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEV 81 (473)
T ss_pred CCceECCEEecCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 467999999854 5789999999999999999999999999999999999999988 99999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCC----CCceeEEEEeecceEEEEeCCCCchhhhHHH
Q 010506 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER----PNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (508)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 174 (508)
++++++|+|||+.+++.|+...++.++++++..+.+.+...+... .+...+.+++|+|||++|+|||||+.+.+++
T Consensus 82 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 161 (473)
T cd07082 82 ANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSK 161 (473)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHH
Confidence 999999999999999999999999999998877766544332211 2345577899999999999999999999999
Q ss_pred HHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHH
Q 010506 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (508)
Q Consensus 175 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (508)
+++||++||+||+|||+.+|.++..+ .++|.++|+|+|++++++| +.+.++.|+.|+++|.|+||||+.+|+.|+
T Consensus 162 i~~AL~aGN~vilKps~~~~~~~~~l----~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 237 (473)
T cd07082 162 LIPALIMGNTVVFKPATQGVLLGIPL----AEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237 (473)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHH----HHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999876 5567889999999999998 667799999999999999999999999999
Q ss_pred HHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCC
Q 010506 254 QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (508)
Q Consensus 254 ~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~ 333 (508)
+.++ ++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|.
T Consensus 238 ~~a~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~ 315 (473)
T cd07082 238 KQHP--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPW 315 (473)
T ss_pred HHhC--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9876 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHH
Q 010506 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEE 412 (508)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~e 412 (508)
++++++||+++..+++++.++++++.++|+++++||... .|+|+.|||+ +++++++++++|+||||++|++|+|++|
T Consensus 316 ~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 393 (473)
T cd07082 316 DNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEE 393 (473)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHH
Confidence 999999999999999999999999999999999999762 3899999988 6888999999999999999999999999
Q ss_pred HHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 413 AVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 413 ai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
||+++|+++|||+++|||+|.+.+.+++ .++++|+|+||.++......+||||+|.||+|+++|.+++++|++.|+++
T Consensus 394 ai~~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~ 471 (473)
T cd07082 394 AIELANKSNYGLQASIFTKDINKARKLA--DALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIV 471 (473)
T ss_pred HHHHHhCCCCCceEEEEeCCHHHHHHHH--HhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEE
Confidence 9999999999999999999999999999 78999999999976544446899999999999999999999999999997
Q ss_pred Ee
Q 010506 493 IN 494 (508)
Q Consensus 493 ~~ 494 (508)
++
T Consensus 472 ~~ 473 (473)
T cd07082 472 IN 473 (473)
T ss_pred EC
Confidence 64
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-92 Score=741.29 Aligned_cols=454 Identities=25% Similarity=0.415 Sum_probs=422.1
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hhH
Q 010506 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEV 117 (508)
Q Consensus 39 ~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev 117 (508)
+||.||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|.++.++|+++++.|+|||+.+++ .|+
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~ 80 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI 80 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999986 599
Q ss_pred HHHHHHHHHHhhhhhhh-cCCcccCC--CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCCh
Q 010506 118 QEVIDMCDFAVGLSRQL-NGSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTP 194 (508)
Q Consensus 118 ~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~ 194 (508)
...++.+++++...+.. .....+.. ......+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p 160 (465)
T cd07098 81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA 160 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence 99999999988765542 22221211 1123456778999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEE
Q 010506 195 LITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274 (508)
Q Consensus 195 ~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~i 274 (508)
+++..+++++.++|+++|+|+|++|+|+|+.+.++.|+.||+|+.|.||||+.+|+.|.+.++++++|+++|+|||||+|
T Consensus 161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~i 240 (465)
T cd07098 161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAI 240 (465)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEE
Confidence 99999999999999999999999999999668899999999999999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHH
Q 010506 275 IMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG 354 (508)
Q Consensus 275 V~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 354 (508)
|++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++.+++|+|.++++++||+++..+++++.++
T Consensus 241 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~ 320 (465)
T cd07098 241 VLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEEL 320 (465)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEe
Q 010506 355 IENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429 (508)
Q Consensus 355 v~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~ 429 (508)
+++++++|+++++||.... ..|+|++|||+ ++++++.++++|+||||++|++|+|++|||+++|+++|||++|||
T Consensus 321 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~ 400 (465)
T cd07098 321 VADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVF 400 (465)
T ss_pred HHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 9999999999999986532 25899999987 688899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHhhcccCcceeEEEEcCCC-CCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEe
Q 010506 430 TRSPENIFKWLGPHGSDTGIVNVNIPT-NGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 430 s~d~~~~~~~~~~~~~~~g~V~iN~~~-~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 494 (508)
|+|.+.+++++ .++++|+|+||... ....+..||||+|.||+|+++|.+++++|++.|+++++
T Consensus 401 t~d~~~~~~~~--~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 401 GKDIKRARRIA--SQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred cCCHHHHHHHH--HhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 99999999999 78999999999854 44456789999999999999999999999999999774
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-92 Score=740.57 Aligned_cols=451 Identities=29% Similarity=0.498 Sum_probs=420.6
Q ss_pred CeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChh
Q 010506 34 PTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP 111 (508)
Q Consensus 34 ~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 111 (508)
.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 4688999999999999999999999999999999998 49999999999999999999999999999999999999999
Q ss_pred hhhh-hHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCC
Q 010506 112 EGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 190 (508)
Q Consensus 112 ~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps 190 (508)
+++. |+...++.+++++...+...+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps 160 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTG-PDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA 160 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCC
Confidence 9974 999999999999988776655433222 33456678999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhh-hccCceeeccC
Q 010506 191 PTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH-QRFGKCLLELS 268 (508)
Q Consensus 191 ~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~-~~~~~~~~elg 268 (508)
+.+|.++..+ .+++.++|+|+|++|+|+| +.+.+..|+.|++++.|+||||+.+|+.|++.++ .+++|+++|+|
T Consensus 161 ~~~p~~~~~l----~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelg 236 (462)
T cd07112 161 EQSPLTALRL----AELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECG 236 (462)
T ss_pred CCCCHHHHHH----HHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCC
Confidence 9999999876 4567899999999999998 6788999999999999999999999999999988 48899999999
Q ss_pred ccCeEEEcCCC-CHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHH
Q 010506 269 GNNAIIIMDDA-DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPES 347 (508)
Q Consensus 269 G~~~~iV~~da-Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~ 347 (508)
||||+||++|+ |++.|++.|++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++..+
T Consensus 237 G~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~ 316 (462)
T cd07112 237 GKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAH 316 (462)
T ss_pred CCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHH
Confidence 99999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCeEeeCCcccC--CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCc
Q 010506 348 RKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGL 424 (508)
Q Consensus 348 ~~~~~~~v~~a~~~ga~v~~gg~~~~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl 424 (508)
++++.++|++++++|+++++||.... .+|+|++|||+ ++++++++++||+||||++|++|+|.+|||+++|+++|||
T Consensus 317 ~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL 396 (462)
T cd07112 317 FDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGL 396 (462)
T ss_pred HHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccc
Confidence 99999999999999999999997532 25899999988 6888999999999999999999999999999999999999
Q ss_pred EEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 425 SSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 425 ~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
++||||+|.+.+.+++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 397 ~~~i~t~d~~~~~~~~--~~l~~g~v~iN~~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 397 AASVWTSDLSRAHRVA--RRLRAGTVWVNCFDE-GDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred eEEEEcCCHHHHHHHH--HhcCcceEEECCCCC-CCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence 9999999999999999 789999999998643 4567899999999999999999999999999885
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-92 Score=745.01 Aligned_cols=464 Identities=22% Similarity=0.342 Sum_probs=412.0
Q ss_pred CCCCCceecCEEec-CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHh-HHhccCChhHHHHHHHHHHHHHHHhH
Q 010506 18 PETPGCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEAS-KIWMELPAPKRGEVVRQIGDALREKL 95 (508)
Q Consensus 18 ~~~~~~~i~g~~~~-~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~-~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
++.+++||||+|+. .+.+++++||+||+++++++. +.+|+++|+++|++|+ +.|+++|..+|.++|++++++|++++
T Consensus 2 ~~~~~~~i~G~~~~~~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~ 80 (521)
T PRK11903 2 TELLANYVAGRWQAGSGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANR 80 (521)
T ss_pred cchhhhhCCCEEEcCCCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 45567899999984 457899999999999999997 8899999999999995 99999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCC--------CCceeEEEEee-cceEEEEeCCCC
Q 010506 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER--------PNHMMLETWNP-LGVVGVITAFNF 166 (508)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~P-~GVv~~i~p~n~ 166 (508)
++|+++++.|+|||+.+++.|+..+++.+++++...+.+.+....... +.......++| +|||++|+||||
T Consensus 81 ~ela~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~ 160 (521)
T PRK11903 81 DAYYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNF 160 (521)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcch
Confidence 999999999999999999999999999999999877665432111100 11223567889 599999999999
Q ss_pred chhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCC-CCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeC
Q 010506 167 PCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK-LPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244 (508)
Q Consensus 167 P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aG-lP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftG 244 (508)
|+.+.++++++||++||+||+|||+.+|+++..+ .+++.++| +|+|++|+|+| +.++++.| ++++.|+|||
T Consensus 161 P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l----~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTG 233 (521)
T PRK11903 161 PAWGLWEKAAPALLAGVPVIVKPATATAWLTQRM----VKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTG 233 (521)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHH----HHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEEC
Confidence 9999999999999999999999999999999876 45567888 99999999998 55554443 7899999999
Q ss_pred CHHHHHHHHHHh--hhccCceeeccCccCeEEEcCCCC-----HHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHH
Q 010506 245 STKVGLMVQQTV--HQRFGKCLLELSGNNAIIIMDDAD-----IKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317 (508)
Q Consensus 245 s~~~g~~i~~~a--~~~~~~~~~elgG~~~~iV~~daD-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~ 317 (508)
|+.+|+.|++.+ +++++|+++|+|||||+||++||| ++.+++.+++|+|.|+||.|++++|||||+++||+|+
T Consensus 234 S~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~ 313 (521)
T PRK11903 234 SAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVA 313 (521)
T ss_pred CHHHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHH
Confidence 999999999964 478999999999999999999999 5999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc------CCCCceeccEEEe-cCC--
Q 010506 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI------ESEGNFVQPTIVE-ISP-- 388 (508)
Q Consensus 318 ~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~------~~~g~~~~Ptv~~-~~~-- 388 (508)
++|+++++++++|+|.++++++||+++..+++++.++++.. .+|+++++||... +.+|+|++|||+. +++
T Consensus 314 ~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~ 392 (521)
T PRK11903 314 EALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDA 392 (521)
T ss_pred HHHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCc
Confidence 99999999999999999999999999999999999999964 5799999999652 1358999999984 443
Q ss_pred CCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCc--ceeEEEEcCCCC--------C
Q 010506 389 TADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGS--DTGIVNVNIPTN--------G 458 (508)
Q Consensus 389 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~--~~g~V~iN~~~~--------~ 458 (508)
++.+++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.+++++ .++ ++|+|+||..+. .
T Consensus 393 ~~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~--~~l~~~~G~V~iN~~~~~~~~~~~~~ 470 (521)
T PRK11903 393 ATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAA--LELADSHGRVHVISPDVAALHTGHGN 470 (521)
T ss_pred cchHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHH--HHHHHhCCEEEEcCcccccccccCCC
Confidence 4688999999999999999999999999999999999999999999999999 778 899999997542 2
Q ss_pred CCCCCCccCCCCCCCCCcc-hHHHHHHhhheeEEE
Q 010506 459 AEIGGAFGGEKATGGGREA-GSDSWKQYMRRSTCT 492 (508)
Q Consensus 459 ~~~~~pfGG~~~SG~g~~~-g~~~~~~~~~~k~v~ 492 (508)
..+.+||||+|.||+|+++ |.+++++||+.|++.
T Consensus 471 ~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~ 505 (521)
T PRK11903 471 VMPQSLHGGPGRAGGGEELGGLRALAFYHRRSAVQ 505 (521)
T ss_pred CCCCCCCCCCCcCcCCcccccHHHHHHHhccceee
Confidence 3346899999999999995 489999999988773
|
|
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-92 Score=736.43 Aligned_cols=440 Identities=32% Similarity=0.536 Sum_probs=411.6
Q ss_pred CceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHH
Q 010506 44 NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDM 123 (508)
Q Consensus 44 g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~ 123 (508)
|+++++++.++.+++++++++|++|++.|+++|..+|.++|+++++.|+++.++|++++++|+|||..+++.|+..+++.
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~ 80 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGFEVGAAIGE 80 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHH-HHHHH
Q 010506 124 CDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT-IAITK 202 (508)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~-~~l~~ 202 (508)
+++++...+...+...+. ..+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ ..
T Consensus 81 l~~~~~~~~~~~~~~~~~-~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~--- 156 (443)
T cd07152 81 LHEAAGLPTQPQGEILPS-APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVV--- 156 (443)
T ss_pred HHHHHHhHHHhCCccccc-cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHH---
Confidence 999987765444333222 2344567789999999999999999999999999999999999999999999996 44
Q ss_pred HHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHH
Q 010506 203 LVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIK 282 (508)
Q Consensus 203 ~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~ 282 (508)
+.++|.++|+|+|++|+|+|+.+.+..|+.||+++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++
T Consensus 157 -l~~~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~ 235 (443)
T cd07152 157 -IARLFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLD 235 (443)
T ss_pred -HHHHHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHH
Confidence 4677899999999999999977889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCC
Q 010506 283 LAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG 362 (508)
Q Consensus 283 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~g 362 (508)
.|++.|++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++..+++++.++++++.++|
T Consensus 236 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 315 (443)
T cd07152 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAG 315 (443)
T ss_pred HHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhc
Q 010506 363 GKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLG 441 (508)
Q Consensus 363 a~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~ 441 (508)
+++++||.. +|+|++|||+ ++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++++++
T Consensus 316 a~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~- 391 (443)
T cd07152 316 ARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALA- 391 (443)
T ss_pred CEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHH-
Confidence 999999974 4899999987 68899999999999999999999999999999999999999999999999999999
Q ss_pred ccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC-CcchHHHHHHhhheeEEEE
Q 010506 442 PHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG-REAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 442 ~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g-~~~g~~~~~~~~~~k~v~~ 493 (508)
.++++|+|+||+++....+.+||||+|.||+| +.+|.+++++|++.|++++
T Consensus 392 -~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~~ 443 (443)
T cd07152 392 -DRLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVTV 443 (443)
T ss_pred -HhCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEeC
Confidence 78999999999976655567899999999999 8889999999999998853
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-92 Score=738.33 Aligned_cols=449 Identities=31% Similarity=0.550 Sum_probs=419.0
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh
Q 010506 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (508)
Q Consensus 38 v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (508)
++||+||+++++++.++.+++++++++|++|++ .|+.+|.++|.++|+++++.|.+++++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 479999999999999999999999999999997 499999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChh
Q 010506 116 EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195 (508)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~ 195 (508)
|+..+++.+++++...+...+...+....+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~ 160 (457)
T cd07114 81 QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPA 160 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchH
Confidence 99999999999988776665443332223445677899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEE
Q 010506 196 ITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274 (508)
Q Consensus 196 ~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~i 274 (508)
++..+ .++|.++|+|+|+||+|+| +.+.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+|
T Consensus 161 ~~~~l----~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~i 236 (457)
T cd07114 161 STLEL----AKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNI 236 (457)
T ss_pred HHHHH----HHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeE
Confidence 99876 4557789999999999998 667889999999999999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHH
Q 010506 275 IMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG 354 (508)
Q Consensus 275 V~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 354 (508)
|++|||++.|++.|++++|.|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||+++..+.++++++
T Consensus 237 V~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 316 (457)
T cd07114 237 VFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERY 316 (457)
T ss_pred ECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEe
Q 010506 355 IENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429 (508)
Q Consensus 355 v~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~ 429 (508)
+++++++|+++++||...+ ..|+|++|||+ ++++++.++++|+||||++|++|+|+||||+++|+++|||+++||
T Consensus 317 i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~if 396 (457)
T cd07114 317 VARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIW 396 (457)
T ss_pred HHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEE
Confidence 9999999999999997643 35899999988 688899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010506 430 TRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 430 s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
|+|.+.+++++ .++++|+|+||..+. ..+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus 397 t~d~~~~~~~~--~~l~~g~v~iN~~~~-~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 457 (457)
T cd07114 397 TRDLARAHRVA--RAIEAGTVWVNTYRA-LSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVWI 457 (457)
T ss_pred CCCHHHHHHHH--HhcCcceEEECCCCC-CCCCCCCCCCccCcCCccchHHHHHHHhceeEEeC
Confidence 99999999999 789999999998654 45678999999999999999999999999998853
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-91 Score=735.92 Aligned_cols=447 Identities=27% Similarity=0.446 Sum_probs=416.1
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHH
Q 010506 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQ 118 (508)
Q Consensus 39 ~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~ 118 (508)
+||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ev~ 80 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGLEVL 80 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhcCC-cccCC--CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChh
Q 010506 119 EVIDMCDFAVGLSRQLNGS-VIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195 (508)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~ 195 (508)
..++.+++++...+...+. ..+.. .++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~ 160 (453)
T cd07099 81 LALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPL 160 (453)
T ss_pred HHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 9999999998876654332 22211 13445678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEE
Q 010506 196 ITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (508)
Q Consensus 196 ~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV 275 (508)
++..+ .+++.++|+|+|++|+|+|+.+.+..|++| .+|.|+||||+++|+.|++.++++++|+++|+|||||+||
T Consensus 161 ~~~~l----~~~l~~ag~P~g~~~vv~g~~~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV 235 (453)
T cd07099 161 VGELL----AEAWAAAGPPQGVLQVVTGDGATGAALIDA-GVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIV 235 (453)
T ss_pred HHHHH----HHHHHHcCCCCCeEEEEeCCchHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEE
Confidence 98766 566789999999999999955788899987 5999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHH
Q 010506 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (508)
Q Consensus 276 ~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (508)
++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.+++
T Consensus 236 ~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i 315 (453)
T cd07099 236 LADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHV 315 (453)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHH
Q 010506 356 ENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434 (508)
Q Consensus 356 ~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~ 434 (508)
++++++|+++++||...+.+|+|++|||+ ++++++.++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+
T Consensus 316 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 395 (453)
T cd07099 316 DDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLA 395 (453)
T ss_pred HHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHH
Confidence 99999999999999764347899999988 68899999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCcceeEEEEcCCCCC-CCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 435 NIFKWLGPHGSDTGIVNVNIPTNG-AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 435 ~~~~~~~~~~~~~g~V~iN~~~~~-~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
.+++++ .++++|+|+||+.+.. ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 396 ~~~~~~--~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 396 RAEAIA--RRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHHH--HhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 999999 7899999999987543 3467899999999999999999999999999885
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-91 Score=735.32 Aligned_cols=446 Identities=32% Similarity=0.528 Sum_probs=415.4
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hh
Q 010506 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GE 116 (508)
Q Consensus 38 v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~e 116 (508)
++||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|.+++++|++++++|+|||..++. .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e 80 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE 80 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999998775 59
Q ss_pred HHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhH
Q 010506 117 VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196 (508)
Q Consensus 117 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~ 196 (508)
+...++.+++++...+.+.+.......++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~ 160 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLT 160 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 99999999999887766654332222233456778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEE
Q 010506 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (508)
Q Consensus 197 ~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV 275 (508)
+..++++ +.+ |+|+|++|+|+| +.+.++.|++|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||
T Consensus 161 ~~~l~~~----~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV 235 (450)
T cd07092 161 TLLLAEL----AAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIV 235 (450)
T ss_pred HHHHHHH----HHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEE
Confidence 9887554 556 999999999998 5568899999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHH
Q 010506 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (508)
Q Consensus 276 ~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (508)
++|||++.|++.|++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.+++
T Consensus 236 ~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i 315 (450)
T cd07092 236 FDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFV 315 (450)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHH
Q 010506 356 ENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434 (508)
Q Consensus 356 ~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~ 434 (508)
+++. +|+++++||...+..|+|++|||+ ++++++.++++|+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 316 ~~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~ 394 (450)
T cd07092 316 ERAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVG 394 (450)
T ss_pred HHHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 9998 999999999865557999999988 67889999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 435 NIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 435 ~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
.+++++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 395 ~~~~~~--~~l~~g~v~iN~~~~-~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 395 RAMRLS--ARLDFGTVWVNTHIP-LAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred HHHHHH--HhcCccEEEECCCCC-CCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 999999 789999999998654 4567899999999999999999999999999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-91 Score=734.53 Aligned_cols=446 Identities=32% Similarity=0.546 Sum_probs=414.5
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh-hhhhhh
Q 010506 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL-PEGIGE 116 (508)
Q Consensus 38 v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-~~a~~e 116 (508)
++||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||. .+++.|
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~~e 80 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQARPE 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999997 688899
Q ss_pred HHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhH
Q 010506 117 VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196 (508)
Q Consensus 117 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~ 196 (508)
+..+++.+++++...+.+.+...+.. .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~ 159 (457)
T cd07108 81 AAVLADLFRYFGGLAGELKGETLPFG-PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHHhCCceeccC-CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHH
Confidence 99999999999987766655443322 33455678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEE
Q 010506 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (508)
Q Consensus 197 ~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV 275 (508)
+..+++++ .++ +|+|++|+|+| +.+.++.|+.|+++|.|+||||+.+|+.|++.++++++|+++|+|||||+||
T Consensus 160 ~~~l~~~~----~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV 234 (457)
T cd07108 160 VLLLAEIL----AQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIV 234 (457)
T ss_pred HHHHHHHH----HHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEE
Confidence 98776554 443 99999999998 6778899999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHH-HHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHH
Q 010506 276 MDDADIKLAVRSVLFA-AVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG 354 (508)
Q Consensus 276 ~~daDl~~aa~~i~~~-~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 354 (508)
++|||++.|++.++++ +|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..++++++++
T Consensus 235 ~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~ 314 (457)
T cd07108 235 FPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGY 314 (457)
T ss_pred CCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 9999999999999999 599999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-CCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEE
Q 010506 355 IENIKS-QGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428 (508)
Q Consensus 355 v~~a~~-~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si 428 (508)
++++++ +|+++++||...+ .+|+|++|||+ ++++++.+++||+||||++|++|+|++|||+++|+++|||++||
T Consensus 315 i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~v 394 (457)
T cd07108 315 IDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYV 394 (457)
T ss_pred HHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEE
Confidence 999998 9999999997632 36899999988 68899999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHH-HHHhhheeEEE
Q 010506 429 FTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDS-WKQYMRRSTCT 492 (508)
Q Consensus 429 ~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~-~~~~~~~k~v~ 492 (508)
||+|.+.+++++ .++++|+|+||++.. .++.+||||+|.||+|+++|.++ +++||+.|+++
T Consensus 395 ft~d~~~a~~~~--~~l~~g~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 395 WTRDLGRALRAA--HALEAGWVQVNQGGG-QQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456 (457)
T ss_pred EcCCHHHHHHHH--HhcCcceEEECCCCC-CCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence 999999999999 789999999999753 45678999999999999999977 69999999885
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-91 Score=732.61 Aligned_cols=448 Identities=34% Similarity=0.585 Sum_probs=420.1
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhH
Q 010506 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117 (508)
Q Consensus 38 v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 117 (508)
++||.||+++++++.++.+++++++++|++|++.|+.+|.++|.++|+++++.|+++.++|+++++.|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 80 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARGEV 80 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHH
Q 010506 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197 (508)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~ 197 (508)
...++.+++++...+...+...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~ 160 (451)
T cd07103 81 DYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSA 160 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHH
Confidence 99999999988876665554333322345667889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEc
Q 010506 198 IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIM 276 (508)
Q Consensus 198 ~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~ 276 (508)
..+ .++|.++|+|+|++|+|++ +.+.++.|+.|+++|.|+||||+.+|+.|.+.++++++|+++|+|||||+||+
T Consensus 161 ~~l----~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~ 236 (451)
T cd07103 161 LAL----AELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVF 236 (451)
T ss_pred HHH----HHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEEC
Confidence 876 4567789999999999998 56788999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHH
Q 010506 277 DDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE 356 (508)
Q Consensus 277 ~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~ 356 (508)
+|||++.|++.|++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++++
T Consensus 237 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~ 316 (451)
T cd07103 237 DDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVE 316 (451)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHH
Q 010506 357 NIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435 (508)
Q Consensus 357 ~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~ 435 (508)
+++.+|+++++||...+.+|+|++|||+ ++++++.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus 317 ~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 396 (451)
T cd07103 317 DAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLAR 396 (451)
T ss_pred HHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 9999999999999764447899999988 688899999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 436 IFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 436 ~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
+++++ .++++|+|+||+++. ..+..||||+|.||+|+++|++++++||+.|+++
T Consensus 397 ~~~~~--~~l~~g~v~vN~~~~-~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 397 AWRVA--EALEAGMVGINTGLI-SDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHHHH--HhCCcceEEECCCCC-CCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 99999 789999999999764 4567899999999999999999999999999885
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-91 Score=729.52 Aligned_cols=442 Identities=29% Similarity=0.488 Sum_probs=410.3
Q ss_pred EeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhh
Q 010506 37 SSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGE 116 (508)
Q Consensus 37 ~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 116 (508)
+++||+||+++++++.++.+++++++++|+++ |+.++.++|.++|+++++.|++++++|++++++|+|||+.+++.|
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~e 78 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRYE 78 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 57899999999999999999999999999875 888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhcCCcccCC----CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCC
Q 010506 117 VQEVIDMCDFAVGLSRQLNGSVIPSE----RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPT 192 (508)
Q Consensus 117 v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~ 192 (508)
+..+++.+++++...+...++..... ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 79 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 158 (451)
T cd07146 79 VGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEK 158 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999887665544332221 12334567899999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccC
Q 010506 193 TPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271 (508)
Q Consensus 193 ~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~ 271 (508)
+|+++..+ .++|.++|+|+|++|+++| +.+.++.|++||+++.|+||||+.+|+.|++.++ .+++++|+||||
T Consensus 159 ~p~~~~~l----~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~ 232 (451)
T cd07146 159 TPLSAIYL----ADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGND 232 (451)
T ss_pred chHHHHHH----HHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCc
Confidence 99998765 5668899999999999998 5678999999999999999999999999998876 789999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHH
Q 010506 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351 (508)
Q Consensus 272 ~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 351 (508)
|+||++|||++.|++.|++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 233 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v 312 (451)
T cd07146 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQI 312 (451)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEec
Q 010506 352 EKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (508)
Q Consensus 352 ~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s 430 (508)
++++++++++|+++++||.. .|+|++|||+ ++++++.+++||+||||++|++|+|++|||+++|+++|||+++|||
T Consensus 313 ~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 389 (451)
T cd07146 313 ENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCT 389 (451)
T ss_pred HHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999999964 5899999988 6889999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCC-CCCcchHHHHHHhhheeEEE
Q 010506 431 RSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATG-GGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 431 ~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG-~g~~~g~~~~~~~~~~k~v~ 492 (508)
+|.+.+++++ .++++|+|+||..+....+.+||||+|.|| +|+++|.+|+++||+.|+++
T Consensus 390 ~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 390 NDLDTIKRLV--ERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CCHHHHHHHH--HHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 9999999999 789999999998655555678999999999 58999999999999999885
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-91 Score=758.09 Aligned_cols=463 Identities=24% Similarity=0.350 Sum_probs=411.4
Q ss_pred CCCceecCEEec-CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHH-hHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010506 20 TPGCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-SKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 20 ~~~~~i~g~~~~-~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
++++||||+|+. ++.+++++||.||+++++++.++ +|+++|+++|++| ++.|+++|..+|.++|++++++|+++.++
T Consensus 4 ~~~~~i~G~~~~~~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~e 82 (675)
T PRK11563 4 KLQSYVAGRWQTGQGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEE 82 (675)
T ss_pred cccceecCEEEcCCCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 456899999985 45679999999999999999987 6999999999998 79999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhc--------CCcccCCCCC-ceeEEEEeec-ceEEEEeCCCCc
Q 010506 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN--------GSVIPSERPN-HMMLETWNPL-GVVGVITAFNFP 167 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-GVv~~i~p~n~P 167 (508)
|++ ++.|+|||+.+++.|+...++.+++++...+... ++..+...++ ...+..++|+ |||++|+|||||
T Consensus 83 la~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwNfP 161 (675)
T PRK11563 83 LYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFNFP 161 (675)
T ss_pred HHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCCchH
Confidence 998 5999999999999999999999999988765432 2222211112 1235678997 999999999999
Q ss_pred hhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCC-CCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCH
Q 010506 168 CAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK-LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246 (508)
Q Consensus 168 ~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aG-lP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~ 246 (508)
+..+++++++||++||+||+|||+.+|+++..+ .+++.++| +|+|++|+|+|+. ++.+..++.++.|+||||+
T Consensus 162 ~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l----~~~~~eaG~~P~gv~~vv~g~~--~~~~~~~~~i~~v~FTGS~ 235 (675)
T PRK11563 162 VWGMLEKLAPAFLAGVPAIVKPATATAYLTEAV----VRLIVESGLLPEGALQLICGSA--GDLLDHLDGQDVVTFTGSA 235 (675)
T ss_pred HHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHH----HHHHHHcCCCCCCcEEEeeCCH--HHHhhcCCCCCEEEEECcH
Confidence 999999999999999999999999999999876 45577899 9999999999842 2334445689999999999
Q ss_pred HHHHHHHHH--hhhccCceeeccCccCeEEEcCCCC-----HHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHH
Q 010506 247 KVGLMVQQT--VHQRFGKCLLELSGNNAIIIMDDAD-----IKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319 (508)
Q Consensus 247 ~~g~~i~~~--a~~~~~~~~~elgG~~~~iV~~daD-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~ 319 (508)
++|+.|++. ++++++|+++|+|||||+||++||| ++.|++.+++|+|.|+||.|++++|||||+++||+|+++
T Consensus 236 ~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~ 315 (675)
T PRK11563 236 ATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEA 315 (675)
T ss_pred HHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHH
Confidence 999999985 4588999999999999999999995 999999999999999999999999999999999999999
Q ss_pred HHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-------CCCCceeccEEE-ecCC--C
Q 010506 320 LVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI-------ESEGNFVQPTIV-EISP--T 389 (508)
Q Consensus 320 L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~-------~~~g~~~~Ptv~-~~~~--~ 389 (508)
|+++++++++|+|.++++++||+++..+++++.++|++++++ +++++||... ..+|+|++|||+ ++++ +
T Consensus 316 l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~ 394 (675)
T PRK11563 316 LRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEA 394 (675)
T ss_pred HHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchhh
Confidence 999999999999999999999999999999999999999999 9999999631 135999999988 5777 4
Q ss_pred CcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcc--eeEEEEcCCCC--------CC
Q 010506 390 ADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSD--TGIVNVNIPTN--------GA 459 (508)
Q Consensus 390 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~--~g~V~iN~~~~--------~~ 459 (508)
+.+++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.+++++ .+++ +|+||||..+. ..
T Consensus 395 ~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~--~~l~~~~G~v~iN~~~~~~~~~~~~~~ 472 (675)
T PRK11563 395 PAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELV--LGAAPWHGRLLVLNRESAKESTGHGSP 472 (675)
T ss_pred hhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHH--HHHHhcCCEEEEcCccccccccCCCCC
Confidence 689999999999999999999999999999999999999999999999999 6786 99999997421 12
Q ss_pred CCCCCccCCCCCCCCCcc-hHHHHHHhhheeEEEE
Q 010506 460 EIGGAFGGEKATGGGREA-GSDSWKQYMRRSTCTI 493 (508)
Q Consensus 460 ~~~~pfGG~~~SG~g~~~-g~~~~~~~~~~k~v~~ 493 (508)
.+.+||||+|.||+|++. |.+++++|++.|++..
T Consensus 473 ~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 473 LPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred CcCCCcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence 256899999999999995 6999999999998844
|
|
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-90 Score=723.72 Aligned_cols=426 Identities=30% Similarity=0.518 Sum_probs=398.2
Q ss_pred HHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcC-
Q 010506 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG- 136 (508)
Q Consensus 58 v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~- 136 (508)
++.++++|++|++.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++.|+..+++.+++++...+....
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~ 80 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAEAFLAD 80 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999988766533
Q ss_pred CcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCC
Q 010506 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGA 216 (508)
Q Consensus 137 ~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g 216 (508)
...+. ++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+ .++|.++|+|+|
T Consensus 81 ~~~~~--~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l----~~~l~~aglP~g 154 (429)
T cd07100 81 EPIET--DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAI----EELFREAGFPEG 154 (429)
T ss_pred eeccC--CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHH----HHHHHHcCCCcC
Confidence 22222 234567789999999999999999999999999999999999999999999999866 566789999999
Q ss_pred eEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhc
Q 010506 217 IFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTA 296 (508)
Q Consensus 217 ~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~ 296 (508)
++|+|+|+.+.+..|+.|++++.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|.|+
T Consensus 155 vv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 234 (429)
T cd07100 155 VFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234 (429)
T ss_pred cEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhcc
Confidence 99999985567889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCC
Q 010506 297 GQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376 (508)
Q Consensus 297 Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g 376 (508)
||.|+++++||||+++||+|+++|+++++++++|+|+++++++||+++..+++++.+++++++++|+++++||...+..|
T Consensus 235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g 314 (429)
T cd07100 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG 314 (429)
T ss_pred CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997644468
Q ss_pred ceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCC
Q 010506 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIP 455 (508)
Q Consensus 377 ~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~ 455 (508)
+|++|||+ ++++++++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.+++++ .++++|+|+||++
T Consensus 315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~--~~l~~g~v~iN~~ 392 (429)
T cd07100 315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVA--RRLEAGMVFINGM 392 (429)
T ss_pred eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH--HhCCcCeEEECCC
Confidence 99999988 68889999999999999999999999999999999999999999999999999999 7899999999987
Q ss_pred CCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 456 TNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 456 ~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
.. ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 393 ~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 393 VK-SDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428 (429)
T ss_pred CC-CCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence 64 4567899999999999999999999999999885
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-90 Score=726.36 Aligned_cols=446 Identities=31% Similarity=0.536 Sum_probs=414.2
Q ss_pred EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh
Q 010506 36 VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (508)
Q Consensus 36 ~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (508)
++++||+||+++++++.++.+++++++++|++|++.|++++.++|.++|+++++.|+++.++|+++++.|+|||..+++.
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK 80 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhhhcCCcccCC----CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCC
Q 010506 116 EVQEVIDMCDFAVGLSRQLNGSVIPSE----RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (508)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 191 (508)
|+...++.+++++...+...++..+.. ..+...+..++|+|||++|+|||||+..+++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~ 160 (453)
T cd07149 81 EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999998877665544322211 1123446788999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCcc
Q 010506 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGN 270 (508)
Q Consensus 192 ~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~ 270 (508)
.+|.++..+ .+++.++|+|+|++|+|+| +.+.+..|+.||++|.|+||||+.+|+.|++.++ .+++++|+|||
T Consensus 161 ~~p~~~~~l----~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk 234 (453)
T cd07149 161 QTPLSALKL----AELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSN 234 (453)
T ss_pred cchHHHHHH----HHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCC
Confidence 999999876 5556789999999999998 5666899999999999999999999999999875 78999999999
Q ss_pred CeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHH
Q 010506 271 NAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKN 350 (508)
Q Consensus 271 ~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 350 (508)
||+||++|+|++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..++++
T Consensus 235 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 314 (453)
T cd07149 235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAER 314 (453)
T ss_pred ceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEe
Q 010506 351 FEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429 (508)
Q Consensus 351 ~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~ 429 (508)
+.+++++++.+|+++++||.. +|+|++|||+ ++++++.++++|+||||++|++|+|++|||+++|+++|||+++||
T Consensus 315 ~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~ 391 (453)
T cd07149 315 IEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVF 391 (453)
T ss_pred HHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEE
Confidence 999999999999999999875 4899999988 678899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 430 TRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 430 s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
|+|.+.+++++ .++++|+|+||+++......+||||+|.||+|+++|.+|+++|++.|+++
T Consensus 392 t~d~~~~~~~~--~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 392 TNDLQKALKAA--RELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred cCCHHHHHHHH--HHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 99999999999 78999999999976555567899999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-90 Score=716.85 Aligned_cols=427 Identities=29% Similarity=0.467 Sum_probs=396.2
Q ss_pred HHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcC
Q 010506 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136 (508)
Q Consensus 57 ~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~ 136 (508)
|+++++++|++|++.|+.+|.++|.++|+++++.|+++.++|+++++.|+|||..++..|+..+++.+++++...+...+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~ 80 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAYHERTG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999998877665544
Q ss_pred CcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCC
Q 010506 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGA 216 (508)
Q Consensus 137 ~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g 216 (508)
...... ++...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+ .++|.++|+|+|
T Consensus 81 ~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l----~~~~~~ag~P~g 155 (431)
T cd07095 81 ERATPM-AQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELM----VELWEEAGLPPG 155 (431)
T ss_pred CcccCC-CCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHH----HHHHHHhCcChh
Confidence 332222 344567889999999999999999999999999999999999999999999998865 566789999999
Q ss_pred eEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhc-cCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhh
Q 010506 217 IFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR-FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295 (508)
Q Consensus 217 ~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~-~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~ 295 (508)
++|+|+|+.+.++.|++|+++|.|+||||+.+|+.|++.++.+ .+++++|+|||||+||++|||++.|++.+++++|.|
T Consensus 156 ~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~ 235 (431)
T cd07095 156 VLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLT 235 (431)
T ss_pred HheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHh
Confidence 9999999777899999999999999999999999999987654 689999999999999999999999999999999999
Q ss_pred cCCCcCCCceEEEecc-cHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC
Q 010506 296 AGQRCTTCRRLLIHES-IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374 (508)
Q Consensus 296 ~Gq~C~a~~~v~V~~~-i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~ 374 (508)
+||.|+++++||||++ ++|+|+++|+++++++++|+|.++++.+||+++..+++++.+++++++++|+++++||...+.
T Consensus 236 ~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~ 315 (431)
T cd07095 236 AGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVA 315 (431)
T ss_pred CCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCC
Confidence 9999999999999999 999999999999999999999999999999999999999999999999999999999976556
Q ss_pred CCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcC
Q 010506 375 EGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNI 454 (508)
Q Consensus 375 ~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~ 454 (508)
+|+|++|||+++++++.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++ .++++|+|+||.
T Consensus 316 ~g~~~~Ptv~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~--~~l~~G~v~iN~ 393 (431)
T cd07095 316 GTAFLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFL--ARIRAGIVNWNR 393 (431)
T ss_pred CCeEEcCEEEecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH--HhCCcceEEECC
Confidence 799999999898889999999999999999999999999999999999999999999999999999 789999999998
Q ss_pred CCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 455 PTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 455 ~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
++......+||||+|.||+|+++|.++++ |++.|++
T Consensus 394 ~~~~~~~~~PfGG~k~SG~G~~~g~~~~~-~~~~~~~ 429 (431)
T cd07095 394 PTTGASSTAPFGGVGLSGNHRPSAYYAAD-YCAYPVA 429 (431)
T ss_pred CCCCCCCCCCCCCcccccCCCCChHHHHH-HHhhhhc
Confidence 76666667899999999999999999999 5555554
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-89 Score=766.11 Aligned_cols=477 Identities=28% Similarity=0.450 Sum_probs=434.2
Q ss_pred hhhhhcCCCCCCCCceecCEEecCCCeEEeecCCCCc-eEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHH
Q 010506 9 EFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQ-KIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQI 87 (508)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~g~-~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~ 87 (508)
+++..........+.+||| ++.+++++||+|++ ++++++.++.+++++|+++|++|++.|+.+|.++|.++|+++
T Consensus 541 ~al~~~~~~~~~~~~~i~g----~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~ka 616 (1038)
T PRK11904 541 AAIAAFLEKQWQAGPIING----EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERA 616 (1038)
T ss_pred HHHHHHHhcCceecceEcC----CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 4455444455566778888 57789999999998 899999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCc-ccCCCCCceeEEEEeecceEEEEeCCCC
Q 010506 88 GDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSV-IPSERPNHMMLETWNPLGVVGVITAFNF 166 (508)
Q Consensus 88 a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~ 166 (508)
++.|++++++|+.+++.|+|||+.++..|+.+++++|+|++..++...+.. ......+......++|+|||++|+||||
T Consensus 617 Adll~~~~~eL~~l~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNf 696 (1038)
T PRK11904 617 ADLLEANRAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNF 696 (1038)
T ss_pred HHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCcc
Confidence 999999999999999999999999999999999999999998887664321 1122234556778999999999999999
Q ss_pred chhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCC
Q 010506 167 PCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGS 245 (508)
Q Consensus 167 P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs 245 (508)
|+..+++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||+|+.|+||||
T Consensus 697 Plai~~~~i~aALaaGNtVIlKPse~tpl~a~~l----~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS 772 (1038)
T PRK11904 697 PLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEA----VKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGS 772 (1038)
T ss_pred HHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHH----HHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECC
Confidence 9999999999999999999999999999999876 4567899999999999999 6679999999999999999999
Q ss_pred HHHHHHHHHHhhhc---cCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHH
Q 010506 246 TKVGLMVQQTVHQR---FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322 (508)
Q Consensus 246 ~~~g~~i~~~a~~~---~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~ 322 (508)
+.+++.|.+.++++ .+|+++|+|||||+||++|||++.|++.+++|+|.++||.|+++++||||+++||+|+++|++
T Consensus 773 ~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~ 852 (1038)
T PRK11904 773 TETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKG 852 (1038)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHH
Confidence 99999999988865 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceeccEEEecCCCCcccccccccc
Q 010506 323 VYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIVEISPTADIVKEELFAP 400 (508)
Q Consensus 323 ~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~--~~g~~~~Ptv~~~~~~~~~~~~E~fgP 400 (508)
+++++++|+|.+.++++||+++..+++++.++++++.+ |+++++||...+ .+|+|+.|||+.+ +++.++++|+|||
T Consensus 853 ~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~-~~~~~~~eEiFGP 930 (1038)
T PRK11904 853 AMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI-DSISQLEREVFGP 930 (1038)
T ss_pred HHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc-CCcHHhCCCCcCc
Confidence 99999999999999999999999999999999999876 899999997643 2599999999864 4677899999999
Q ss_pred eeEeEEeC--CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCC-CCccCCCCCCCC-Cc
Q 010506 401 VLYVMKFQ--TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGEKATGGG-RE 476 (508)
Q Consensus 401 vl~v~~~~--~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~-~pfGG~~~SG~g-~~ 476 (508)
|++|++|+ +++|+|+++|+++|||+++|||+|.+.+++++ .++++|+||||+.+.++..+ .||||+|.||+| +.
T Consensus 931 VL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~--~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~ka 1008 (1038)
T PRK11904 931 ILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIA--DRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKA 1008 (1038)
T ss_pred EEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHH--HhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCcc
Confidence 99999997 69999999999999999999999999999999 78999999999977666544 599999999999 57
Q ss_pred chHHHHHHhhheeEEEEeCCC
Q 010506 477 AGSDSWKQYMRRSTCTINYGN 497 (508)
Q Consensus 477 ~g~~~~~~~~~~k~v~~~~~~ 497 (508)
+|++++++|++.|+|++++.+
T Consensus 1009 GG~~~L~~f~~~ktv~~~~~~ 1029 (1038)
T PRK11904 1009 GGPHYLLRFATEKTVTVNTTA 1029 (1038)
T ss_pred chHHHHHHHhceEEEEEcccc
Confidence 789999999999999988643
|
|
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-89 Score=721.45 Aligned_cols=447 Identities=30% Similarity=0.507 Sum_probs=416.3
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hh
Q 010506 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GE 116 (508)
Q Consensus 38 v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~e 116 (508)
++||+||+++++++.++.+++++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+||+..+++ .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e 80 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD 80 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999998886 49
Q ss_pred HHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhH
Q 010506 117 VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196 (508)
Q Consensus 117 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~ 196 (508)
+..+++.+++++.......+..... ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~ 159 (455)
T cd07093 81 IPRAAANFRFFADYILQLDGESYPQ-DGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLT 159 (455)
T ss_pred HHHHHHHHHHHHHhHHHhCCccccC-CCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHH
Confidence 9999999999888766544332222 124456678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEE
Q 010506 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (508)
Q Consensus 197 ~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV 275 (508)
+..+ .++|.++|+|+|++|+++| +.+.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||
T Consensus 160 ~~~l----~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV 235 (455)
T cd07093 160 AWLL----AELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIV 235 (455)
T ss_pred HHHH----HHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEE
Confidence 8876 5567899999999999998 6788899999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHH
Q 010506 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (508)
Q Consensus 276 ~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (508)
++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.+++
T Consensus 236 ~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 315 (455)
T cd07093 236 FADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYV 315 (455)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEec
Q 010506 356 ENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (508)
Q Consensus 356 ~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s 430 (508)
++++.+|+++++||...+ ..|+|++|||+ ++++++++++||+||||++|++|+|.+|||+++|+++|||+++|||
T Consensus 316 ~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t 395 (455)
T cd07093 316 ELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWT 395 (455)
T ss_pred HHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEC
Confidence 999999999999997632 35899999987 6888999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 431 RSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 431 ~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
+|.+.+++++ .++++|+|+||+.... .+..||||+|.||+|+++|.+++++|++.|+++
T Consensus 396 ~d~~~~~~~~--~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 396 RDLGRAHRVA--RRLEAGTVWVNCWLVR-DLRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454 (455)
T ss_pred CCHHHHHHHH--HhCCcceEEECCCCCC-CCCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence 9999999999 7899999999997653 456899999999999999999999999999885
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-89 Score=711.24 Aligned_cols=442 Identities=22% Similarity=0.323 Sum_probs=396.8
Q ss_pred ceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHh--ccCChhHH----HHHHHHHHHHHHHh--
Q 010506 23 CFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIW--MELPAPKR----GEVVRQIGDALREK-- 94 (508)
Q Consensus 23 ~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w--~~~~~~~R----~~~L~~~a~~l~~~-- 94 (508)
+||||+|+.++++++++||+||+++++++.++.+|+++++++|++||+.| +.++..+| .++|+++++.|+++
T Consensus 1 ~~i~g~~~~~~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~ 80 (489)
T cd07126 1 NLVAGKWKGASNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEV 80 (489)
T ss_pred CcCCCEEecCCCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCC
Confidence 47999999767889999999999999999999999999999999999998 55778899 89999999999998
Q ss_pred HHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcc--cCCCCCceeEEEEeecceEEEEeCCCCchhhhH
Q 010506 95 LHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI--PSERPNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 172 (508)
.++|++++++|+|||+.+++.|+..+++.+++++...+...+... +....+...+++++|+|||++|+|||||+.+.+
T Consensus 81 ~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~ 160 (489)
T cd07126 81 EDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPA 160 (489)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHHHH
Confidence 499999999999999999999999999999999987765544331 222234456788999999999999999999999
Q ss_pred HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHH
Q 010506 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (508)
Q Consensus 173 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (508)
+++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.+.+..|+.|+++++|+||||+++|+.|
T Consensus 161 ~~ia~ALaaGN~VVlKPSe~tp~~~~~l----~~~~~~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~vGr~i 236 (489)
T cd07126 161 LQLMGALFMGNKPLLKVDSKVSVVMEQF----LRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERL 236 (489)
T ss_pred HHHHHHHHcCCEEEEECCCCCCHHHHHH----HHHHHHhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 9999999999999999999999999876 556789999999999999933335668889999999999999999999
Q ss_pred HHHhhhccCceeeccCccCeEEEcCCC-CHHHHHHHHHHHHHhhcCCCcCCCceEEEeccc-HHHHHHHHHHhhhhcccC
Q 010506 253 QQTVHQRFGKCLLELSGNNAIIIMDDA-DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESI-YQTVLDQLVDVYKQVKIG 330 (508)
Q Consensus 253 ~~~a~~~~~~~~~elgG~~~~iV~~da-Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~L~~~~~~~~~g 330 (508)
...++ +++++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++ +|+|+++|++.++++++|
T Consensus 237 ~~~~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g 313 (489)
T cd07126 237 ALELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLE 313 (489)
T ss_pred HHHhC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccC
Confidence 88876 6799999999999999999 999999999999999999999999999999995 689999999999999887
Q ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCC----CC-ceeccEEEe-------cCCCCccccccc
Q 010506 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKS-QGGKILTGGSVIES----EG-NFVQPTIVE-------ISPTADIVKEEL 397 (508)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~-~ga~v~~gg~~~~~----~g-~~~~Ptv~~-------~~~~~~~~~~E~ 397 (508)
+ +++||+++.. .+++.++++++++ +|+++++||...+. ++ .|++|||+. ++++|.+++||+
T Consensus 314 ~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEi 387 (489)
T cd07126 314 D-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEV 387 (489)
T ss_pred C-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCC
Confidence 4 5799999998 8999999999998 89999999976432 23 389999874 456899999999
Q ss_pred ccceeEeEEeCC--HHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeE--EEEcCCCCCCCCC---CCccCCCC
Q 010506 398 FAPVLYVMKFQT--FEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGI--VNVNIPTNGAEIG---GAFGGEKA 470 (508)
Q Consensus 398 fgPvl~v~~~~~--~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~--V~iN~~~~~~~~~---~pfGG~~~ 470 (508)
||||++|++|+| ++|||+++|+++|||++||||+|.+++++++ .++++|+ |+||..+.++... .||||+|.
T Consensus 388 FGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~--~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~ 465 (489)
T cd07126 388 FGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVL--ANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRG 465 (489)
T ss_pred cCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHH--HhCCcceEEEEecCCCCCCCcccCcCCCCCCcc
Confidence 999999999999 9999999999999999999999999999999 7899999 6699877666544 89999999
Q ss_pred CCCCCcchH
Q 010506 471 TGGGREAGS 479 (508)
Q Consensus 471 SG~g~~~g~ 479 (508)
||+|+++..
T Consensus 466 sg~g~~~~~ 474 (489)
T cd07126 466 AGIGTPEAI 474 (489)
T ss_pred cCCCCHhHH
Confidence 999998754
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-88 Score=711.44 Aligned_cols=433 Identities=22% Similarity=0.303 Sum_probs=396.7
Q ss_pred CCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhh
Q 010506 52 EASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGL 130 (508)
Q Consensus 52 ~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~ 130 (508)
.++.+|+++++++|++|++.|+.++..+|.++|+++++.|++++++|+++++.|+|||+.+++ .|+..+++.+++++..
T Consensus 2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~ 81 (484)
T PLN02203 2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN 81 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999996 6999999999999887
Q ss_pred hhhhcCCc---ccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHH
Q 010506 131 SRQLNGSV---IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (508)
Q Consensus 131 ~~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~ 207 (508)
.+...+.. .+....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~---- 157 (484)
T PLN02203 82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAAN---- 157 (484)
T ss_pred HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHH----
Confidence 66553321 11111233567889999999999999999999999999999999999999999999999877555
Q ss_pred HHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcC---CCCHHHH
Q 010506 208 FERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD---DADIKLA 284 (508)
Q Consensus 208 l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~---daDl~~a 284 (508)
+.+ ++|+|++|+|+|+.+.++.|+.|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|
T Consensus 158 ~~~-~lP~gvv~vv~g~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~a 235 (484)
T PLN02203 158 IPK-YLDSKAVKVIEGGPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVA 235 (484)
T ss_pred HHH-hCCcCEEEEEeCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHH
Confidence 455 499999999999888999999995 99999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHh-hcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCC
Q 010506 285 VRSVLFAAVG-TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG 363 (508)
Q Consensus 285 a~~i~~~~~~-~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga 363 (508)
++.+++++|. |+||.|++++|+|||++++|+|+++|.++++++++|||.++ +++||+++..+++++.+++++++.. +
T Consensus 236 a~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~ 313 (484)
T PLN02203 236 VNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-A 313 (484)
T ss_pred HHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 9999999996 89999999999999999999999999999999999999885 6899999999999999999999887 7
Q ss_pred eEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcc
Q 010506 364 KILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGP 442 (508)
Q Consensus 364 ~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~ 442 (508)
++++||.. +.+|+|++|||+ ++++++.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++
T Consensus 314 ~~~~gg~~-~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~-- 390 (484)
T PLN02203 314 SIVHGGSI-DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRIL-- 390 (484)
T ss_pred eEEeCCCc-CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--
Confidence 89999875 447999999988 68889999999999999999999999999999999999999999999999999999
Q ss_pred cCcceeEEEEcCCCCC-CCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010506 443 HGSDTGIVNVNIPTNG-AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 443 ~~~~~g~V~iN~~~~~-~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
.++++|.|+||+.... ..+.+||||+|.||+|+++|.+++++||+.|+++++.
T Consensus 391 ~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 391 SETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred HhCCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcC
Confidence 7899999999986533 3456899999999999999999999999999998874
|
|
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-88 Score=706.83 Aligned_cols=426 Identities=28% Similarity=0.444 Sum_probs=394.8
Q ss_pred HHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcC
Q 010506 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136 (508)
Q Consensus 57 ~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~ 136 (508)
|+++++++|++|++.|++++.++|.++|+++++.|+++.++|++++++|+|||..+++.|+..+++.+++++...+...+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLITQIIG 80 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999988888999999999999987766533
Q ss_pred CcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCC
Q 010506 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGA 216 (508)
Q Consensus 137 ~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g 216 (508)
...+....+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l----~~~~~~aGlP~g 156 (432)
T cd07105 81 GSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLI----GRVFHEAGLPKG 156 (432)
T ss_pred eecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHH----HHHHHHcCcCCC
Confidence 3333322344567789999999999999999999999999999999999999999999999866 566789999999
Q ss_pred eEEEecCC----hhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHH
Q 010506 217 IFTSFCGG----AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAA 292 (508)
Q Consensus 217 ~~~~v~g~----~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~ 292 (508)
++|+|+|+ .++++.|++||+++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++
T Consensus 157 v~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~ 236 (432)
T cd07105 157 VLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236 (432)
T ss_pred cEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence 99999973 35789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc
Q 010506 293 VGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI 372 (508)
Q Consensus 293 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~ 372 (508)
|.|+||.|+++++||||+++||+|+++|+++++++++| .+++||+++..+++++.+++++++++|+++++||...
T Consensus 237 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 311 (432)
T cd07105 237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD 311 (432)
T ss_pred HhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 99999999999999999999999999999999999988 6789999999999999999999999999999999764
Q ss_pred C-CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEE
Q 010506 373 E-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIV 450 (508)
Q Consensus 373 ~-~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V 450 (508)
+ ..|+|++|||+ ++++++.+++||+||||++|++|+|.||||+++|+++|||++||||+|.+.+++++ .++++|+|
T Consensus 312 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~g~v 389 (432)
T cd07105 312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVA--KRIESGAV 389 (432)
T ss_pred CCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcCeE
Confidence 2 46899999987 68899999999999999999999999999999999999999999999999999999 78999999
Q ss_pred EEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010506 451 NVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 451 ~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
+||+++....+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus 390 ~vN~~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 390 HINGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWITI 432 (432)
T ss_pred EECCCCCCCCCCCCCCCcccccccccChHHHHHHhhceEEEeC
Confidence 9999765555678999999999999999999999999999863
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-88 Score=707.24 Aligned_cols=428 Identities=36% Similarity=0.608 Sum_probs=399.3
Q ss_pred HHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcC
Q 010506 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136 (508)
Q Consensus 57 ~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~ 136 (508)
|++++++.|++|++.|+.++..+|.++|+++++.|++++++|+++++.|+||+..+++.|+..+++.+++++...+...+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLPRRPEG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999887765544
Q ss_pred CcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCC
Q 010506 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGA 216 (508)
Q Consensus 137 ~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g 216 (508)
...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.. ++.+++.++|+|+|
T Consensus 81 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~---~l~~~l~~aGlP~g 157 (431)
T cd07104 81 EILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGL---LIAEIFEEAGLPKG 157 (431)
T ss_pred ccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHH---HHHHHHHHcCCCcc
Confidence 333322234456788999999999999999999999999999999999999999999987432 24678899999999
Q ss_pred eEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhh
Q 010506 217 IFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295 (508)
Q Consensus 217 ~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~ 295 (508)
++|+|+| +.+.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|.|
T Consensus 158 vv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 237 (431)
T cd07104 158 VLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLH 237 (431)
T ss_pred cEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhc
Confidence 9999998 667889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCC
Q 010506 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375 (508)
Q Consensus 296 ~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~ 375 (508)
+||.|+++++||||++++|+|+++|+++++.+++|+|.++++.+||+++..+++++.+++++++.+|+++++||.. +
T Consensus 238 ~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~---~ 314 (431)
T cd07104 238 QGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---E 314 (431)
T ss_pred CCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999864 5
Q ss_pred CceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcC
Q 010506 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNI 454 (508)
Q Consensus 376 g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~ 454 (508)
|+|++|||+ ++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+
T Consensus 315 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~--~~l~~g~v~iN~ 392 (431)
T cd07104 315 GLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFA--ERLETGMVHIND 392 (431)
T ss_pred CceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhcCcCeEEECC
Confidence 899999987 68889999999999999999999999999999999999999999999999999999 789999999999
Q ss_pred CCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 455 PTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 455 ~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
++....+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 393 ~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 393 QTVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred CCCCCCCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence 87655567899999999999999999999999999985
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-88 Score=702.99 Aligned_cols=426 Identities=23% Similarity=0.325 Sum_probs=390.1
Q ss_pred CCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhh
Q 010506 53 ASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLS 131 (508)
Q Consensus 53 ~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~ 131 (508)
.+.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+|||+.+++ .|+...++.+++++...
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~ 81 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL 81 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999997 59999999999999877
Q ss_pred hhhcCC-cccCC---CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHH
Q 010506 132 RQLNGS-VIPSE---RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (508)
Q Consensus 132 ~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~ 207 (508)
+..... ..... ......+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l---- 157 (436)
T cd07135 82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAEL---- 157 (436)
T ss_pred HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHH----
Confidence 654322 11111 1233557789999999999999999999999999999999999999999999999876554
Q ss_pred HHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHH
Q 010506 208 FERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRS 287 (508)
Q Consensus 208 l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~ 287 (508)
+.+ |+|+|++|+|+|+.+....|+.|| +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.
T Consensus 158 ~~~-~lP~g~v~vv~g~~~~~~~l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~ 235 (436)
T cd07135 158 VPK-YLDPDAFQVVQGGVPETTALLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKR 235 (436)
T ss_pred HHH-hCCcCEEEEEcCCchhHHHHHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHH
Confidence 455 799999999998434445688999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEee
Q 010506 288 VLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILT 367 (508)
Q Consensus 288 i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~ 367 (508)
+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||+++..+++++.++++++ |+++++
T Consensus 236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~ 311 (436)
T cd07135 236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVI 311 (436)
T ss_pred HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEE
Confidence 999999999999999999999999999999999999999999999 8899999999999999999999887 889999
Q ss_pred CCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcc
Q 010506 368 GGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSD 446 (508)
Q Consensus 368 gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~ 446 (508)
||.. +.+|+|++|||+ +++++++++++|+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++ .+++
T Consensus 312 gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~--~~l~ 388 (436)
T cd07135 312 GGEM-DEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHIL--TRTR 388 (436)
T ss_pred CCCc-CCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--hcCC
Confidence 9976 347899999988 68899999999999999999999999999999999999999999999999999999 7899
Q ss_pred eeEEEEcCCCCC-CCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 447 TGIVNVNIPTNG-AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 447 ~g~V~iN~~~~~-~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
+|+|+||..+.. .++.+||||+|.||+|+++|.+++++|++.|++
T Consensus 389 ~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i 434 (436)
T cd07135 389 SGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTV 434 (436)
T ss_pred cCeEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhcccccc
Confidence 999999986533 356789999999999999999999999999987
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-88 Score=695.51 Aligned_cols=405 Identities=30% Similarity=0.517 Sum_probs=377.6
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeC
Q 010506 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITA 163 (508)
Q Consensus 84 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 163 (508)
|+++++.|++++++|+++++.|+|||+.+++.|+..+++.+++++.+.+...+.......++...+..++|+|||++|+|
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILP 80 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECC
Confidence 57899999999999999999999999999999999999999999988776655433222233456788999999999999
Q ss_pred CCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEE
Q 010506 164 FNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSF 242 (508)
Q Consensus 164 ~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~f 242 (508)
||||+.+.++++++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+| +.+.++.|++|++++.|+|
T Consensus 81 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l----~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~f 156 (409)
T PRK10090 81 WNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAF----AKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSM 156 (409)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHH----HHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEE
Confidence 9999999999999999999999999999999999876 5567899999999999999 7788999999999999999
Q ss_pred eCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHH
Q 010506 243 TGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322 (508)
Q Consensus 243 tGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~ 322 (508)
|||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++
T Consensus 157 tGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~ 236 (409)
T PRK10090 157 TGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGE 236 (409)
T ss_pred ECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCC-CCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccc
Q 010506 323 VYKQVKIGDPLEK-GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAP 400 (508)
Q Consensus 323 ~~~~~~~g~p~~~-~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgP 400 (508)
+++++++|||.++ ++++||+++..+++++++++++++++|+++++||...+..|+|++|||+ ++++++++++||+|||
T Consensus 237 ~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgP 316 (409)
T PRK10090 237 AMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGP 316 (409)
T ss_pred HHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCc
Confidence 9999999999998 8999999999999999999999999999999999875556899999988 7899999999999999
Q ss_pred eeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHH
Q 010506 401 VLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480 (508)
Q Consensus 401 vl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~ 480 (508)
|++|++|+|++|||+++|+++|||+++|||+|.+.+++++ .++++|.|+||+..... ...||||+|.||+|+++|.+
T Consensus 317 vl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~--~~l~~G~v~iN~~~~~~-~~~pfGG~k~SG~G~~~g~~ 393 (409)
T PRK10090 317 VLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAI--KGLKFGETYINRENFEA-MQGFHAGWRKSGIGGADGKH 393 (409)
T ss_pred eEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcceEEECCCCCCC-CCCCcCCcccccCCccchHH
Confidence 9999999999999999999999999999999999999999 88999999999876433 45799999999999999999
Q ss_pred HHHHhhheeEEEEeC
Q 010506 481 SWKQYMRRSTCTINY 495 (508)
Q Consensus 481 ~~~~~~~~k~v~~~~ 495 (508)
++++|++.|++++++
T Consensus 394 gl~~f~~~k~v~~~~ 408 (409)
T PRK10090 394 GLHEYLQTQVVYLQS 408 (409)
T ss_pred HHHHhcceEEEEEec
Confidence 999999999998875
|
|
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-87 Score=705.30 Aligned_cols=431 Identities=23% Similarity=0.333 Sum_probs=392.2
Q ss_pred CCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhh
Q 010506 52 EASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGL 130 (508)
Q Consensus 52 ~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~ 130 (508)
.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+...++.+++++..
T Consensus 3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~ 82 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH 82 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999986 5999999999998876
Q ss_pred hhhhcC-CcccC--CCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHH
Q 010506 131 SRQLNG-SVIPS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (508)
Q Consensus 131 ~~~~~~-~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~ 207 (508)
.+.... ..... .......+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~l---- 158 (493)
T PTZ00381 83 LDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKL---- 158 (493)
T ss_pred HHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHH----
Confidence 655422 21111 11123467889999999999999999999999999999999999999999999999877555
Q ss_pred HHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHH
Q 010506 208 FERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRS 287 (508)
Q Consensus 208 l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~ 287 (508)
+.+ ++|+|++++|+|+.+.+..|+.++ +|.|+||||+.+|+.|+++++++++|+++|+|||||+||++|||++.|++.
T Consensus 159 l~~-~lp~~~v~vv~g~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~ 236 (493)
T PTZ00381 159 LTK-YLDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARR 236 (493)
T ss_pred HHH-hCCcCEEEEecCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHH
Confidence 445 499999999999888888899887 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEee
Q 010506 288 VLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILT 367 (508)
Q Consensus 288 i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~ 367 (508)
|++++|.|+||.|+++++||||++++|+|+++|++.++++. |++.++++++||+++.++++++.++++ ++|+++++
T Consensus 237 i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~ 312 (493)
T PTZ00381 237 IAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVY 312 (493)
T ss_pred HHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEE
Confidence 99999999999999999999999999999999999999986 666678899999999999999999986 36899999
Q ss_pred CCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcc
Q 010506 368 GGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSD 446 (508)
Q Consensus 368 gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~ 446 (508)
||.. +.+++|++|||+ ++++++.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++ .+++
T Consensus 313 gG~~-~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~--~~~~ 389 (493)
T PTZ00381 313 GGEV-DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVL--ENTS 389 (493)
T ss_pred CCCc-CCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH--HhCC
Confidence 9976 456889999987 78899999999999999999999999999999999999999999999999999999 7899
Q ss_pred eeEEEEcCCC-CCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010506 447 TGIVNVNIPT-NGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 447 ~g~V~iN~~~-~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
+|.|+||+.. ....+.+||||+|.||+|++||.+|+++||+.|+|+.+.
T Consensus 390 sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 390 SGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred cceEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence 9999999865 334567899999999999999999999999999998874
|
|
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-87 Score=696.36 Aligned_cols=421 Identities=24% Similarity=0.335 Sum_probs=385.2
Q ss_pred HHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCC-
Q 010506 60 EGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGS- 137 (508)
Q Consensus 60 ~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~- 137 (508)
+.+++|++||+.|+.+|..+|.++|+++++.|+++.++|+++++.|+|||+.+++ .|+..+++.+++++...+...+.
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5688999999999999999999999999999999999999999999999999997 59999999999999877655332
Q ss_pred cccCC--CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCC
Q 010506 138 VIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (508)
Q Consensus 138 ~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~ 215 (508)
..... ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++ +.++ +|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~----~~~a-lP~ 156 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKI----IEET-FDE 156 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHH----HHHh-CCC
Confidence 22111 1233567789999999999999999999999999999999999999999999999877554 5566 999
Q ss_pred CeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhh
Q 010506 216 AIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295 (508)
Q Consensus 216 g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~ 295 (508)
|++|+|+|+.+.+..|++|+ ++.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 157 gv~~~v~g~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~ 235 (449)
T cd07136 157 EYVAVVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLN 235 (449)
T ss_pred CEEEEEeCChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcc
Confidence 99999999777788898775 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCC
Q 010506 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375 (508)
Q Consensus 296 ~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~ 375 (508)
+||.|++++|||||+++||+|+++|+++++++++|+|.+ .+++||+++..+++++.++++++ ++++||.. +.+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~-~~~ 308 (449)
T cd07136 236 AGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNT-DRE 308 (449)
T ss_pred cCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCc-CCC
Confidence 999999999999999999999999999999999999987 89999999999999999988763 89999976 346
Q ss_pred CceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcC
Q 010506 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNI 454 (508)
Q Consensus 376 g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~ 454 (508)
|+|++|||+ ++++++.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+++++ .++++|+|+||.
T Consensus 309 g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~vN~ 386 (449)
T cd07136 309 TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVL--ENLSFGGGCIND 386 (449)
T ss_pred CCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEECC
Confidence 999999988 68899999999999999999999999999999999999999999999999999999 889999999998
Q ss_pred CCCC-CCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010506 455 PTNG-AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 455 ~~~~-~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
.+.. ..+.+||||+|.||+|+++|.+++++||+.|+++++.
T Consensus 387 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 428 (449)
T cd07136 387 TIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKKS 428 (449)
T ss_pred ccccccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEcC
Confidence 6533 3357899999999999999999999999999999873
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-87 Score=692.47 Aligned_cols=422 Identities=23% Similarity=0.324 Sum_probs=385.4
Q ss_pred HHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCC-
Q 010506 60 EGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGS- 137 (508)
Q Consensus 60 ~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~- 137 (508)
+++++|++|++.|+.++..+|.++|+++++.|++++++|+++++.|+|||+.++. .|+..+++.+++++...+.....
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4889999999999999999999999999999999999999999999999999986 59999999999998876553322
Q ss_pred c--ccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCC
Q 010506 138 V--IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (508)
Q Consensus 138 ~--~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~ 215 (508)
. .+........+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++ +.+ ++|+
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~----~~~-~~P~ 157 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKL----IPE-YLDT 157 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHH----HHH-hCCc
Confidence 1 11111123456789999999999999999999999999999999999999999999999887655 445 4999
Q ss_pred CeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHH-h
Q 010506 216 AIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAV-G 294 (508)
Q Consensus 216 g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~-~ 294 (508)
|++|+|+|+.+.+..|++| .++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .
T Consensus 158 gvv~~v~g~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~ 236 (432)
T cd07137 158 KAIKVIEGGVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC 236 (432)
T ss_pred CeEEEEeCCHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhc
Confidence 9999999977788889987 6999999999999999999999999999999999999999999999999999999999 5
Q ss_pred hcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC
Q 010506 295 TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374 (508)
Q Consensus 295 ~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~ 374 (508)
|+||.|++++|+|||++++|+|+++|.++++++++|||. .++++||+++..+++++.++++++.. |+++++||.. +.
T Consensus 237 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~-~~ 313 (432)
T cd07137 237 NNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPK-ESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGER-DE 313 (432)
T ss_pred cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCC-ccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCc-CC
Confidence 999999999999999999999999999999999999994 58999999999999999999999998 8999999976 44
Q ss_pred CCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEc
Q 010506 375 EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVN 453 (508)
Q Consensus 375 ~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN 453 (508)
+|+|++|||+ ++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++ .++++|.|+||
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~iN 391 (432)
T cd07137 314 KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIV--AETSSGGVTFN 391 (432)
T ss_pred CCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHH--HhCCcCcEEEC
Confidence 7999999987 68889999999999999999999999999999999999999999999999999999 78999999999
Q ss_pred CCCCC-CCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 454 IPTNG-AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 454 ~~~~~-~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
.++.. ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 392 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 392 DTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred CccccccCCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence 86543 3467899999999999999999999999999875
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-86 Score=747.22 Aligned_cols=449 Identities=29% Similarity=0.478 Sum_probs=414.2
Q ss_pred CceecCEEecCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHH
Q 010506 22 GCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGR 100 (508)
Q Consensus 22 ~~~i~g~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 100 (508)
.-+|+|+ ...+..++++||+| ++++++++.++.+|++.|+++|++|++.|+.+|..+|+++|+++++.|+++.++|+.
T Consensus 648 ~p~~~~~-~~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~ 726 (1318)
T PRK11809 648 APMLEDP-VAAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMG 726 (1318)
T ss_pred CCcccCc-CCCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHH
Confidence 4456773 34567899999999 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhh
Q 010506 101 LLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180 (508)
Q Consensus 101 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 180 (508)
+++.|+|||+.++..|+.+++++|+||+...+.... ...++|+|||++|+|||||+.++++++++||+
T Consensus 727 l~~~EaGKt~~~A~~EV~eaidflryyA~~a~~~~~------------~~~~~PlGVV~~IsPWNFPlai~~g~iaaALa 794 (1318)
T PRK11809 727 LLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDFD------------NDTHRPLGPVVCISPWNFPLAIFTGQVAAALA 794 (1318)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceeecccEEEEECCCccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999977653210 13588999999999999999999999999999
Q ss_pred cCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhc
Q 010506 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (508)
Q Consensus 181 aGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (508)
+||+||+|||+++|+++..+ .+++.++|+|+|++|+|+| +.+++..|+.||+|++|+||||+++|+.|.+.++++
T Consensus 795 AGN~VV~KPseqTpl~a~~l----v~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~ 870 (1318)
T PRK11809 795 AGNSVLAKPAEQTPLIAAQA----VRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGR 870 (1318)
T ss_pred cCCeEEEeCCCCcHHHHHHH----HHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhh
Confidence 99999999999999998876 4557889999999999999 777899999999999999999999999999998877
Q ss_pred c------CceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCC
Q 010506 260 F------GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (508)
Q Consensus 260 ~------~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~ 333 (508)
+ +|+++|+||||++||++|||++.|++.|++|+|.++||.|++.++||||++++|+|++.|+.+++++++|||.
T Consensus 871 l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~ 950 (1318)
T PRK11809 871 LDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPD 950 (1318)
T ss_pred cccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 5 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceeccEEEecCCCCcccccccccceeEeEEeC--
Q 010506 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---SEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQ-- 408 (508)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~---~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~-- 408 (508)
+.++++||+++..+.+++.++|++++++|++++.|+...+ ..|+|++|||+.+ +++.++++|+||||++|++|+
T Consensus 951 ~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~-~~~~~l~eEiFGPVL~V~~~~~~ 1029 (1318)
T PRK11809 951 RLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL-DSFDELKREVFGPVLHVVRYNRN 1029 (1318)
T ss_pred cccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec-cchhhhcCcccCceEEEEEeCCC
Confidence 9999999999999999999999999999999998875422 4699999999875 467889999999999999996
Q ss_pred CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCC-CCccCCCCCCCCC-cchHHHHHHhh
Q 010506 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGEKATGGGR-EAGSDSWKQYM 486 (508)
Q Consensus 409 ~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~-~pfGG~~~SG~g~-~~g~~~~~~~~ 486 (508)
+++|+|+++|+++|||+++|||+|.+.+++++ .++++|+||||....++..+ .||||+|.||+|. .+|++++.+|+
T Consensus 1030 ~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~--~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~ 1107 (1318)
T PRK11809 1030 QLDELIEQINASGYGLTLGVHTRIDETIAQVT--GSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLL 1107 (1318)
T ss_pred CHHHHHHHHhcCCCCceEEEEeCCHHHHHHHH--HhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHh
Confidence 79999999999999999999999999999999 88999999999976665444 6999999999995 68999999999
Q ss_pred heeE
Q 010506 487 RRST 490 (508)
Q Consensus 487 ~~k~ 490 (508)
+.+.
T Consensus 1108 ~~~~ 1111 (1318)
T PRK11809 1108 ATRP 1111 (1318)
T ss_pred ccCC
Confidence 9874
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-86 Score=748.72 Aligned_cols=466 Identities=31% Similarity=0.457 Sum_probs=424.1
Q ss_pred hhhhcCCCCCCCCceecCEEecCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHH
Q 010506 10 FLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIG 88 (508)
Q Consensus 10 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a 88 (508)
+|.......-..+.+|+|+.. .+..++++||+| ++++++++.++.+++++|+++|++|++.|+.+|.++|+++|++++
T Consensus 544 al~~~~~~~~~~~~~i~g~~~-~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raA 622 (1208)
T PRK11905 544 ALNAFAAKTWHAAPLLAGGDV-DGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAA 622 (1208)
T ss_pred HHHHHHccCeeecceeccccc-cCCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Confidence 344333333344556777544 466799999999 889999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCch
Q 010506 89 DALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPC 168 (508)
Q Consensus 89 ~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 168 (508)
+.|++++++|+.+++.|+||++.++..|+.+++++++|++...+.... ...++|+|||++|+|||||+
T Consensus 623 dll~~~~~eL~~l~~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~------------~~~~~P~GVv~~IsPwNfPl 690 (1208)
T PRK11905 623 DLMEAHMPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLN------------GPGHKPLGPVVCISPWNFPL 690 (1208)
T ss_pred HHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceecCccEEEEEcCCcCHH
Confidence 999999999999999999999999999999999999999987665421 12467999999999999999
Q ss_pred hhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHH
Q 010506 169 AVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTK 247 (508)
Q Consensus 169 ~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~ 247 (508)
.++++++++||++||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+.
T Consensus 691 ai~~g~i~aALaaGN~VV~KPse~tpl~a~~l----~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~ 766 (1208)
T PRK11905 691 AIFTGQIAAALVAGNTVLAKPAEQTPLIAARA----VRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTE 766 (1208)
T ss_pred HHHHHHHHHHHHcCCEEEEeCCcccHHHHHHH----HHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHH
Confidence 99999999999999999999999999999876 4567899999999999999 667999999999999999999999
Q ss_pred HHHHHHHHhhhcc---CceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhh
Q 010506 248 VGLMVQQTVHQRF---GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVY 324 (508)
Q Consensus 248 ~g~~i~~~a~~~~---~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~ 324 (508)
+|+.|.+.++++. +|+++|+|||||+||++|||++.|++.+++|+|.++||.|+++++||||++++|+|+++|++++
T Consensus 767 vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~ 846 (1208)
T PRK11905 767 VARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAM 846 (1208)
T ss_pred HHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHH
Confidence 9999999988763 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceeccEEEecCCCCcccccccccceeE
Q 010506 325 KQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIVEISPTADIVKEELFAPVLY 403 (508)
Q Consensus 325 ~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~-~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~ 403 (508)
+++++|||.+..+++||+++..+++++.++|+++.+.|+.++.|+...+ .+|+|+.|||+.+ +++.++++|+||||++
T Consensus 847 ~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~-~~~~~~~eEiFGPVL~ 925 (1208)
T PRK11905 847 DELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEI-DSISDLEREVFGPVLH 925 (1208)
T ss_pred HHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEec-CChHHhcCCccCceEE
Confidence 9999999999999999999999999999999999999998887764322 4699999999875 5678899999999999
Q ss_pred eEEeC--CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCC-CCccCCCCCCCCC-cchH
Q 010506 404 VMKFQ--TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGEKATGGGR-EAGS 479 (508)
Q Consensus 404 v~~~~--~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~-~pfGG~~~SG~g~-~~g~ 479 (508)
|++|+ +++|+|+++|+++|||+++|||+|.+.++++. .++++|+||||..+.++..+ .||||+|.||+|. .+|+
T Consensus 926 V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~--~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp 1003 (1208)
T PRK11905 926 VVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVT--SRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGP 1003 (1208)
T ss_pred EEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHH--HhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCH
Confidence 99997 69999999999999999999999999999999 88999999999977666544 6999999999995 7899
Q ss_pred HHHHHhhheeEEEEeC
Q 010506 480 DSWKQYMRRSTCTINY 495 (508)
Q Consensus 480 ~~~~~~~~~k~v~~~~ 495 (508)
+++.+|++.|+++++.
T Consensus 1004 ~~L~~f~~~k~v~~~~ 1019 (1208)
T PRK11905 1004 LYLGRLVREAPTPIPP 1019 (1208)
T ss_pred HHHHHHhhcceeeccc
Confidence 9999999999998764
|
|
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-86 Score=688.31 Aligned_cols=422 Identities=21% Similarity=0.280 Sum_probs=382.7
Q ss_pred HHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC-hhhhh-hhHHHHHHHHHHHhhhhhhhcCCc
Q 010506 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKI-LPEGI-GEVQEVIDMCDFAVGLSRQLNGSV 138 (508)
Q Consensus 61 al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~-~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~ 138 (508)
.+++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+||+ ..++. .|+...++.+++++..........
T Consensus 3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~ 82 (434)
T cd07133 3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPS 82 (434)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999985 56764 699999999999988765433222
Q ss_pred c-cC--CCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCC
Q 010506 139 I-PS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (508)
Q Consensus 139 ~-~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~ 215 (508)
. .. .......+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++ +.++ +|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l----~~~a-lP~ 157 (434)
T cd07133 83 RRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAEL----LAEY-FDE 157 (434)
T ss_pred ccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHH----HHHh-CCc
Confidence 1 11 11233457889999999999999999999999999999999999999999999999876554 5554 999
Q ss_pred CeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhh
Q 010506 216 AIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295 (508)
Q Consensus 216 g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~ 295 (508)
|++|+|+|+.+.++.|++++ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 158 g~~~~v~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~ 236 (434)
T cd07133 158 DEVAVVTGGADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLN 236 (434)
T ss_pred CeEEEEeCChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhcc
Confidence 99999999777888898766 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--
Q 010506 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-- 373 (508)
Q Consensus 296 ~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~-- 373 (508)
+||.|+++++||||++++|+|+++|+++++++++|+ +.++++||+++..+++++.+++++++++|+++++||...+
T Consensus 237 ~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~ 314 (434)
T cd07133 237 AGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDF 314 (434)
T ss_pred CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCC
Confidence 999999999999999999999999999999999886 4678999999999999999999999999999999987633
Q ss_pred CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEE
Q 010506 374 SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNV 452 (508)
Q Consensus 374 ~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~i 452 (508)
.+|+|++|||+ ++++++++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++ .++++|+|+|
T Consensus 315 ~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~--~~l~~G~v~i 392 (434)
T cd07133 315 AATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVL--RRTHSGGVTI 392 (434)
T ss_pred CCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEE
Confidence 46899999987 68899999999999999999999999999999999999999999999999999999 7899999999
Q ss_pred cCCCC-CCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 453 NIPTN-GAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 453 N~~~~-~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
|.++. ..++.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 393 N~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 393 NDTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred CCcccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 98653 33467899999999999999999999999999884
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-85 Score=685.12 Aligned_cols=424 Identities=21% Similarity=0.327 Sum_probs=388.8
Q ss_pred HHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcC-C
Q 010506 60 EGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNG-S 137 (508)
Q Consensus 60 ~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~-~ 137 (508)
+++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||+.+++ .|+..+++.+++++...+.... .
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999999999997 6999999999988876543322 1
Q ss_pred cccC--CCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCC
Q 010506 138 VIPS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (508)
Q Consensus 138 ~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~ 215 (508)
.... ...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+. +++.++ +|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~----~~~~~a-~p~ 156 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIA----KIIREA-FDE 156 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHH----HHHHHh-CCc
Confidence 1111 112335678899999999999999999999999999999999999999999999997764 455666 899
Q ss_pred CeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhh
Q 010506 216 AIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295 (508)
Q Consensus 216 g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~ 295 (508)
|++++++|+.+.+..|++|+ ++.|+||||+.+|+.|++.++++.+|+++|+|||||+||++|||++.|++.+++++|.+
T Consensus 157 g~v~~v~g~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~ 235 (433)
T cd07134 157 DEVAVFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN 235 (433)
T ss_pred CEEEEEeCChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcC
Confidence 99999999778889999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCC-CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC
Q 010506 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP-LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374 (508)
Q Consensus 296 ~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~ 374 (508)
+||.|+++++||||++++|+|+++|+++++.++.|+| .+.++++||+++..+++++.+++++++++|+++++||.. +.
T Consensus 236 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~-~~ 314 (433)
T cd07134 236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQF-DA 314 (433)
T ss_pred cCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCc-CC
Confidence 9999999999999999999999999999999988887 788999999999999999999999999999999999976 44
Q ss_pred CCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEc
Q 010506 375 EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVN 453 (508)
Q Consensus 375 ~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN 453 (508)
+|+|++|||+ ++++++.+++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.+++++ .++++|.|+||
T Consensus 315 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~--~~l~~g~v~iN 392 (433)
T cd07134 315 AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVL--ARTSSGGVVVN 392 (433)
T ss_pred CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHH--HhCCcceEEEC
Confidence 6899999988 68999999999999999999999999999999999999999999999999999999 78999999999
Q ss_pred CCCCC-CCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 454 IPTNG-AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 454 ~~~~~-~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
..+.. .++..||||+|.||+|+++|.+++++||+.|+++
T Consensus 393 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 393 DVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred CcccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 86543 3467899999999999999999999999999884
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-85 Score=681.89 Aligned_cols=422 Identities=23% Similarity=0.343 Sum_probs=382.2
Q ss_pred HHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCc
Q 010506 60 EGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSV 138 (508)
Q Consensus 60 ~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~ 138 (508)
+++++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+|||+.++. .|+...++.+++++...+......
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5789999999999999999999999999999999999999999999999999996 699999999999888766543322
Q ss_pred ccCC---CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCC
Q 010506 139 IPSE---RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (508)
Q Consensus 139 ~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~ 215 (508)
.... ......+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++ +.+ ++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~----~~~-~lp~ 156 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAEL----IPK-YLDK 156 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHH----HHH-hCCc
Confidence 1111 1123467789999999999999999999999999999999999999999999999887555 445 4999
Q ss_pred CeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhh
Q 010506 216 AIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295 (508)
Q Consensus 216 g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~ 295 (508)
|++|+++|+.+.+..|++ +++|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|.|
T Consensus 157 gv~~vv~g~~~~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~ 235 (443)
T cd07132 157 ECYPVVLGGVEETTELLK-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFIN 235 (443)
T ss_pred CeEEEEeCCHHHHHHHHh-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhc
Confidence 999999996555667775 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCC
Q 010506 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375 (508)
Q Consensus 296 ~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~ 375 (508)
+||.|+++++||||++++|+|+++|.+++++++.|+| ++.+++||+++.++++++.++++. +++++||.. +.+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~-~~~ 308 (443)
T cd07132 236 AGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQT-DEK 308 (443)
T ss_pred CCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCcc-CCC
Confidence 9999999999999999999999999999999998888 678999999999999999998863 589999976 446
Q ss_pred CceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcC
Q 010506 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNI 454 (508)
Q Consensus 376 g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~ 454 (508)
|+|++|||+ +++++++++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.+++++ .++++|.|+||.
T Consensus 309 ~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~--~~l~~G~v~IN~ 386 (443)
T cd07132 309 ERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKIL--SNTSSGGVCVND 386 (443)
T ss_pred CCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHH--HhCCcceEEECC
Confidence 899999987 68899999999999999999999999999999999999999999999999999999 789999999998
Q ss_pred CCCCC-CCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeCC
Q 010506 455 PTNGA-EIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 455 ~~~~~-~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
.+... .+.+||||+|.||+|+++|.+++++|++.|++++++.
T Consensus 387 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~~ 429 (443)
T cd07132 387 TIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSL 429 (443)
T ss_pred cccccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEccc
Confidence 65433 3568999999999999999999999999999998864
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-86 Score=617.94 Aligned_cols=504 Identities=65% Similarity=1.111 Sum_probs=490.3
Q ss_pred cchhhhhhhhcCCCCCCCCceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHH
Q 010506 4 AKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83 (508)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~ 83 (508)
..+.|++|+++++.+.+...|. |+|-.++..+..++|++.++|+.+..++.+|.+.+++.|++|.+.|...|...|.++
T Consensus 4 n~~~y~flkelglte~n~gvy~-gkw~a~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgei 82 (507)
T KOG2453|consen 4 NDSKYGFLKELGLTENNAGVYH-GKWAASGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEI 82 (507)
T ss_pred ccchhHHHHHhCCcccccceee-eeeccCCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchH
Confidence 3467899999999999999865 599999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeC
Q 010506 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITA 163 (508)
Q Consensus 84 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 163 (508)
.+.+.+.|++..+-|-+++++|+||-..|..+|+++.++.|+|+..+.+.+.+..+|+++++......|.|+|+|++|+.
T Consensus 83 vrqigdalr~klq~lg~lvslemgkilaegvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvita 162 (507)
T KOG2453|consen 83 VRQIGDALRTKLQNLGKLVSLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITA 162 (507)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred CCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEe
Q 010506 164 FNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFT 243 (508)
Q Consensus 164 ~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ft 243 (508)
+|||....-|+-+.++.+||+|+|||.+.+|+++..+.+++.+.|.+.-+|++.....+|+.+.++++..+.+++.+.||
T Consensus 163 fnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsft 242 (507)
T KOG2453|consen 163 FNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFT 242 (507)
T ss_pred ccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHh
Q 010506 244 GSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323 (508)
Q Consensus 244 Gs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~ 323 (508)
||+.+++.+.+....+..+..+|+||||++||.+|||+..++...++++...+||+|+..+|++||+++||+.+++|+..
T Consensus 243 GssQvgKsvgq~vqarfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkka 322 (507)
T KOG2453|consen 243 GSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKA 322 (507)
T ss_pred cchhhhhHHHHHHHHHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeE
Q 010506 324 YKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLY 403 (508)
Q Consensus 324 ~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~ 403 (508)
.+++++|+|+|+.+.+||+.+......+...++.+++.|+++++||+..+.+|+|++|||+....|.++..+|.|.|||.
T Consensus 323 yaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivtl~hda~vv~~etfapily 402 (507)
T KOG2453|consen 323 YAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVTLKHDAPVVLRETFAPILY 402 (507)
T ss_pred HHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEEecCCcchhhhhhccceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHH
Q 010506 404 VMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWK 483 (508)
Q Consensus 404 v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~ 483 (508)
|.+|.+++||+++-|.-+.||+.||||+|..++.++......++|.|+||.|+++++.+-.|||-|.+|.||+.|.++++
T Consensus 403 vlkf~~~eea~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswk 482 (507)
T KOG2453|consen 403 VLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWK 482 (507)
T ss_pred EEeccchhhhheeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHH
Confidence 99999999999999999999999999999999999987778999999999999999999999999999999999999999
Q ss_pred HhhheeEEEEeCCCCCCCccCCCCC
Q 010506 484 QYMRRSTCTINYGNELPLAQGINFG 508 (508)
Q Consensus 484 ~~~~~k~v~~~~~~~~~~~~~~~~~ 508 (508)
+|+++.+++++|++++|++|+++|+
T Consensus 483 qymrrstctinyskelplaqgikf~ 507 (507)
T KOG2453|consen 483 QYMRRSTCTINYSKELPLAQGIKFE 507 (507)
T ss_pred HHHhhceeeeeccccCchhhccCCC
Confidence 9999999999999999999999996
|
|
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-83 Score=667.06 Aligned_cols=418 Identities=24% Similarity=0.356 Sum_probs=378.6
Q ss_pred HHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCc
Q 010506 60 EGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSV 138 (508)
Q Consensus 60 ~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~ 138 (508)
+++++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+|||..++. .|+...++.+++++...+......
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4889999999999999999999999999999999999999999999999987775 599999999999887766443221
Q ss_pred -c--cCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCC
Q 010506 139 -I--PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (508)
Q Consensus 139 -~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~ 215 (508)
. .........+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++ +.+ |+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~----~~~-~~P~ 156 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKL----IPK-YFDP 156 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHH----HHH-hCCC
Confidence 1 1111233457789999999999999999999999999999999999999999999999876554 555 6999
Q ss_pred CeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhh
Q 010506 216 AIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295 (508)
Q Consensus 216 g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~ 295 (508)
|++|+++|+.+.+..|++|+ ++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|.|
T Consensus 157 gv~~vv~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 235 (426)
T cd07087 157 EAVAVVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN 235 (426)
T ss_pred CEEEEEeCCchHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhc
Confidence 99999999667788999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCC
Q 010506 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375 (508)
Q Consensus 296 ~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~ 375 (508)
+||.|+++++||||++++|+|+++|++.+++++.|+|. +.+++||+++..+.+++.++++++ ++++||.. +.+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~-~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~-~~~ 308 (426)
T cd07087 236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPK-ESPDYGRIINERHFDRLASLLDDG-----KVVIGGQV-DKE 308 (426)
T ss_pred cCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCc-cCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCcc-CCC
Confidence 99999999999999999999999999999999866664 688999999999999999988754 78999876 446
Q ss_pred CceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcC
Q 010506 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNI 454 (508)
Q Consensus 376 g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~ 454 (508)
|+|++|||+ ++++++.++++|+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++ .++++|+|+||.
T Consensus 309 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~g~v~iN~ 386 (426)
T cd07087 309 ERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVL--AETSSGGVCVND 386 (426)
T ss_pred CCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH--hcCCcccEEECC
Confidence 899999988 68889999999999999999999999999999999999999999999999999999 789999999998
Q ss_pred CCCC-CCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 455 PTNG-AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 455 ~~~~-~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
++.. ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 387 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 387 VLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred cccccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 6532 3467899999999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-84 Score=614.29 Aligned_cols=488 Identities=21% Similarity=0.342 Sum_probs=442.0
Q ss_pred chhhhhhhhcCCCCCCCCceecCEEe--cCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHH
Q 010506 5 KQEYEFLSEIGLSPETPGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82 (508)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~ 82 (508)
.+++++++--+..+.+--.+|--+-. ...+++..+-|+||+.+++++.-++.|+++.+..|++||++|.+.+...|.+
T Consensus 33 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~ 112 (583)
T KOG2454|consen 33 VDASDVLAHGKDTEENSFIYIPPRGRSQQSDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQ 112 (583)
T ss_pred cCHHHhccCCCchhhcCeeecCCCCCCcCCCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHH
Confidence 46777777544444444444443322 3567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHhCCChhhh-hhhHHHHHHHHHHHhhhh-hhhcCCcccCCCC--CceeEEEEeecceE
Q 010506 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLS-RQLNGSVIPSERP--NHMMLETWNPLGVV 158 (508)
Q Consensus 83 ~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~P~GVv 158 (508)
+|+.+.+.+.+|+|.+++..++|+||+..+| .+|+.-..+.+.+..... +.+.++..+.... -+..++.++|+||+
T Consensus 113 fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI 192 (583)
T KOG2454|consen 113 FLRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVI 192 (583)
T ss_pred HHHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceE
Confidence 9999999999999999999999999998876 489888888887766543 3343333332110 12345789999999
Q ss_pred EEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcC
Q 010506 159 GVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRIS 238 (508)
Q Consensus 159 ~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~ 238 (508)
..|.|||||+.+++.++..||.+||++|+|-|+.+.++.....++++.+|+..|-|+++++++++=++.+++|.+|+.++
T Consensus 193 ~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~k 272 (583)
T KOG2454|consen 193 GAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVK 272 (583)
T ss_pred EEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999778999999999999
Q ss_pred EEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHH
Q 010506 239 LVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318 (508)
Q Consensus 239 ~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~ 318 (508)
.|.|.||+.+++.|++.+++.++|+++|+|||+++||.+|+|++..+..+++|.|..+||.|.+.+|++||+++||.|+.
T Consensus 273 hitFiGSqpvak~i~~~AAk~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~ 352 (583)
T KOG2454|consen 273 HITFIGSQPVAKMIMRNAAKTLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIG 352 (583)
T ss_pred eEEEecCcHHHHHHHHhhhhhcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc----CCCCceeccEEE-ecCCCCccc
Q 010506 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI----ESEGNFVQPTIV-EISPTADIV 393 (508)
Q Consensus 319 ~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~----~~~g~~~~Ptv~-~~~~~~~~~ 393 (508)
.|.++++.++.|.|...+.+||.|++..+.+.++..+++|+++||+++.||.+. ...|.|++||++ +++++|.++
T Consensus 353 ~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIa 432 (583)
T KOG2454|consen 353 QLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIA 432 (583)
T ss_pred HHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhH
Confidence 999999999999999999999999999999999999999999999999999863 247999999976 999999999
Q ss_pred ccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCC
Q 010506 394 KEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGG 473 (508)
Q Consensus 394 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~ 473 (508)
+||.||||++++++++.|++|+++|+++|||.++||+.|.+++.+++ .++++|+|.||+..++..-++||||++.||+
T Consensus 433 qeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a--~~lqtG~vAiNDFasfY~cQlPFGG~k~SGy 510 (583)
T KOG2454|consen 433 QEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIA--SQLQTGVVAINDFASFYMCQLPFGGVKDSGY 510 (583)
T ss_pred hhhccccchhhhhcCChHHHHhhccCCcccccceeccccHHHHHHHH--hhhhccceeehhhhhhheeccccCCccCCCc
Confidence 99999999999999999999999999999999999999999999999 8899999999997665555799999999999
Q ss_pred CCcchHHHHHHhhheeEEEEe
Q 010506 474 GREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 474 g~~~g~~~~~~~~~~k~v~~~ 494 (508)
||..|.+|++...+.|+|..+
T Consensus 511 GrFaG~EGLrg~Cn~Ksv~yd 531 (583)
T KOG2454|consen 511 GRFAGIEGLRGCCNVKSVAYD 531 (583)
T ss_pred cccccHHHHHHHhcccceecc
Confidence 999999999999999999665
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-82 Score=659.56 Aligned_cols=419 Identities=23% Similarity=0.316 Sum_probs=378.1
Q ss_pred HHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhc--
Q 010506 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN-- 135 (508)
Q Consensus 58 v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~-- 135 (508)
+++|+++|++|++.|+.+|..+|.++|+++++.|++++++|+++++.|+|||..+++.|+...++.+++++...+...
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~~~~~~ 80 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVREGSWL 80 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999987765322
Q ss_pred CCcccCC------CCCceeEEEEeecceEEEEeCCCCchhh--hHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHH
Q 010506 136 GSVIPSE------RPNHMMLETWNPLGVVGVITAFNFPCAV--LGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (508)
Q Consensus 136 ~~~~~~~------~~~~~~~~~~~P~GVv~~i~p~n~P~~~--~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~ 207 (508)
+...... .+....+..++|+|||++|+|||||+.+ .++++++||++||+||+|||+.+|.++.++++++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~ 160 (454)
T cd07129 81 DARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAA 160 (454)
T ss_pred cccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 1111111 1122346789999999999999999987 4589999999999999999999999999999999999
Q ss_pred HHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhh--ccCceeeccCccCeEEEcCCC---CH
Q 010506 208 FERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ--RFGKCLLELSGNNAIIIMDDA---DI 281 (508)
Q Consensus 208 l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~--~~~~~~~elgG~~~~iV~~da---Dl 281 (508)
+.++|+|+|++|+|+| +.+.++.|++|++|+.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|+ |+
T Consensus 161 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl 240 (454)
T cd07129 161 LRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERG 240 (454)
T ss_pred HHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHH
Confidence 9999999999999999 66789999999999999999999999999999988 689999999999999999999 89
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCceEEEecc-cHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH
Q 010506 282 KLAVRSVLFAAVGTAGQRCTTCRRLLIHES-IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360 (508)
Q Consensus 282 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~ 360 (508)
+.|++.+++|+|.|+||.|++++|||||++ ++|+|+++|.++++++++| |++++...+++.+.++++.+
T Consensus 241 ~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g----------~~~~~~~~~~~~~~i~~a~~ 310 (454)
T cd07129 241 EAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQ----------TMLTPGIAEAYRQGVEALAA 310 (454)
T ss_pred HHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCC----------CCcChHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 9999999999999988754 66777777888888999999
Q ss_pred C-CCeEeeCCcccCCCCceeccEEEecC----CCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCC--H
Q 010506 361 Q-GGKILTGGSVIESEGNFVQPTIVEIS----PTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS--P 433 (508)
Q Consensus 361 ~-ga~v~~gg~~~~~~g~~~~Ptv~~~~----~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d--~ 433 (508)
+ |+++++||... .+|+|++|||+.++ +++.++++|+||||++|++|+|.+|+|+++|++.|||++||||+| .
T Consensus 311 ~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~ 389 (454)
T cd07129 311 APGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDL 389 (454)
T ss_pred cCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchH
Confidence 8 99999999753 47999999998543 589999999999999999999999999999999999999999999 7
Q ss_pred HHHHHhhcccCc--ceeEEEEcCCCCCCC--CCCCccC-CCCCCCCCc--chHHHHHHhhhee
Q 010506 434 ENIFKWLGPHGS--DTGIVNVNIPTNGAE--IGGAFGG-EKATGGGRE--AGSDSWKQYMRRS 489 (508)
Q Consensus 434 ~~~~~~~~~~~~--~~g~V~iN~~~~~~~--~~~pfGG-~~~SG~g~~--~g~~~~~~~~~~k 489 (508)
+.+++++ .++ ++|+|+||.++.... +.+|||| +|.||+|++ +|.+++++||+.-
T Consensus 390 ~~a~~~~--~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~~ 450 (454)
T cd07129 390 ALARELL--PVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRPV 450 (454)
T ss_pred HHHHHHH--HHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhcccc
Confidence 9999998 667 699999998765554 3789999 999999999 7999999999963
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-81 Score=657.99 Aligned_cols=422 Identities=22% Similarity=0.315 Sum_probs=372.6
Q ss_pred EeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh-
Q 010506 37 SSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG- 115 (508)
Q Consensus 37 ~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~- 115 (508)
.=+||+|++++++++.++. ++++++|++|++.|+.+++.+|.++|++++++|+++.++|+++++.|+|||+.+++.
T Consensus 68 ~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~ 144 (551)
T TIGR02288 68 GERSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQA 144 (551)
T ss_pred cccCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhc
Confidence 3469999999999999985 899999999999999999999999999999999999999999999999999998853
Q ss_pred ----hHHHHHHHHHHHhhhhhhhcCCcc---cCCCCCce---eEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEE
Q 010506 116 ----EVQEVIDMCDFAVGLSRQLNGSVI---PSERPNHM---MLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCV 185 (508)
Q Consensus 116 ----ev~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~V 185 (508)
+..+.++.++|++...+.+.+... +....... ....++|+|||++|+|||||+++.++++++||++||+|
T Consensus 145 gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~V 224 (551)
T TIGR02288 145 GGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPV 224 (551)
T ss_pred cChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeE
Confidence 677788899998877665544322 21111111 12368999999999999999999999999999999999
Q ss_pred EeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC--ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCce
Q 010506 186 VWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG--GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263 (508)
Q Consensus 186 Vlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g--~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~ 263 (508)
|+|||+.+|+++..+.+++.++|.++|+|+|++|+|+| +.+.++.|+.||+|+.|.||||+.+|+.|++.++ .+++
T Consensus 225 VlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v 302 (551)
T TIGR02288 225 LVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQV 302 (551)
T ss_pred EEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcE
Confidence 99999999999988888889999999999999999997 4678999999999999999999999999999876 4799
Q ss_pred eeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecc---------cHHHHHHHHHHhhhhcccCCCCC
Q 010506 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHES---------IYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 264 ~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~---------i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
++|+|||||+||++|+|++.+++.+++|+|.|+||.|++++|||||++ +||+|+++|+++++++ +|||.+
T Consensus 303 ~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~ 381 (551)
T TIGR02288 303 YTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPAR 381 (551)
T ss_pred EeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCccc
Confidence 999999999999999999999999999999999999999999999999 7999999999999999 999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCC-ceeccEEEecCC-CCcccccccccceeEeEEeCC
Q 010506 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---SEG-NFVQPTIVEISP-TADIVKEELFAPVLYVMKFQT 409 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~---~~g-~~~~Ptv~~~~~-~~~~~~~E~fgPvl~v~~~~~ 409 (508)
..+++||+++..+++++ +++++.| ++++||.... ..| +|++|||+.+++ +|.+++||+||||++|++|+|
T Consensus 382 ~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d 456 (551)
T TIGR02288 382 ATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDD 456 (551)
T ss_pred ccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECC
Confidence 99999999999999995 5666777 6666665421 135 688999997775 899999999999999999999
Q ss_pred HHHHHHHhccC--CCC-cEEEEecCCHHHHHHhhcccCc----------ceeEEEEcCCCCCCCCCCCccCCCCCCCCCc
Q 010506 410 FEEAVKINNSV--PQG-LSSSIFTRSPENIFKWLGPHGS----------DTGIVNVNIPTNGAEIGGAFGGEKATGGGRE 476 (508)
Q Consensus 410 ~~eai~~~n~~--~~g-l~~si~s~d~~~~~~~~~~~~~----------~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~ 476 (508)
.||||+++|++ +|| |+++|||+|.++++++. .++ ++|.|+||.+ .||++.+.||....
T Consensus 457 ~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~--~~~~~~~~~l~iN~~G~v~vN~~-------~~~~~~~~sg~n~~ 527 (551)
T TIGR02288 457 GAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQ--EAAWDAAVALSLNLTGGVFVNQS-------AAFSDFHGTGGNPA 527 (551)
T ss_pred HHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHH--HHHHHhccCeeecCCceEEEccC-------CCCCCCCCCCCCCc
Confidence 99999999998 566 99999999999999998 666 7788888874 35888888887755
Q ss_pred ch
Q 010506 477 AG 478 (508)
Q Consensus 477 ~g 478 (508)
.|
T Consensus 528 a~ 529 (551)
T TIGR02288 528 AN 529 (551)
T ss_pred cC
Confidence 53
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-80 Score=643.65 Aligned_cols=407 Identities=21% Similarity=0.287 Sum_probs=355.2
Q ss_pred HHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhh
Q 010506 55 LEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQL 134 (508)
Q Consensus 55 ~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~ 134 (508)
-+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++|++++++|+|||..++. ++.+++++......
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~------~~~~~~~~~~~~~~ 76 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK------IAKNHLAAEKTPGT 76 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHHhcCcc
Confidence 368999999999999999999999999999999999999999999999999999997763 33444444321111
Q ss_pred cCCcccC--CCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCC
Q 010506 135 NGSVIPS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212 (508)
Q Consensus 135 ~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aG 212 (508)
. ..... ..++...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.++|.++|
T Consensus 77 ~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aG 155 (429)
T cd07121 77 E-DLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAG 155 (429)
T ss_pred c-ccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcC
Confidence 0 00010 11223456778999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHH
Q 010506 213 LPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFA 291 (508)
Q Consensus 213 lP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~ 291 (508)
+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|++. .+|+++|+|||||+||++|||++.|++.|+++
T Consensus 156 lP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~ 231 (429)
T cd07121 156 GPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIVQG 231 (429)
T ss_pred CCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHHhc
Confidence 99999999998 67889999999999999999999999999875 49999999999999999999999999999999
Q ss_pred HHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHC--CCeEeeCC
Q 010506 292 AVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQ--GGKILTGG 369 (508)
Q Consensus 292 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~--ga~v~~gg 369 (508)
+|+|+||.|++++|||||+++||+|+++|++. .. ++++.++.+++.++++++.+. |+++++||
T Consensus 232 ~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~~--------------~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg 296 (429)
T cd07121 232 ASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-GA--------------YVLNDEQAEQLLEVVLLTNKGATPNKKWVGK 296 (429)
T ss_pred ccccCCCCCCccceEEEeHHHHHHHHHHHHHC-CC--------------EEcCHHHHHHHHHhhcccCCCccccccccCc
Confidence 99999999999999999999999999999886 11 367899999999999998864 68999988
Q ss_pred cc---cCCCCceecc---EEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCc--EEEEecCCHHHHHHhh
Q 010506 370 SV---IESEGNFVQP---TIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGL--SSSIFTRSPENIFKWL 440 (508)
Q Consensus 370 ~~---~~~~g~~~~P---tv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~si~s~d~~~~~~~~ 440 (508)
.. .+..|+|++| ||+ +++++|++++||+||||++|++|+|+||||+++|++.||| +++|||+|.+++++++
T Consensus 297 ~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a 376 (429)
T cd07121 297 DASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMA 376 (429)
T ss_pred CHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHH
Confidence 64 1225788874 977 7899999999999999999999999999999999999998 9999999999999999
Q ss_pred cccCcceeEEEEcCCCCCCCCCCCccCCCCCCC--CCcch--HHHHHHhhheeEEE
Q 010506 441 GPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGG--GREAG--SDSWKQYMRRSTCT 492 (508)
Q Consensus 441 ~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~--g~~~g--~~~~~~~~~~k~v~ 492 (508)
.++++|+||||.++. .++||||+|.|++ |..-| .-..++||+.+.++
T Consensus 377 --~~l~aG~v~iN~~~~---~~~p~gG~k~s~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (429)
T cd07121 377 --RAMQTTIFVKNGPSY---AGLGVGGEGYTTFTIAGPTGEGLTSARTFTRRRRCV 427 (429)
T ss_pred --hhCCceEEEEcCCCc---CccccCCCccceEEecCCcCcCccChhhhheeeeec
Confidence 889999999998754 4689999999998 55444 33447777777664
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-79 Score=639.68 Aligned_cols=428 Identities=38% Similarity=0.672 Sum_probs=397.1
Q ss_pred HHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCc
Q 010506 59 EEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSV 138 (508)
Q Consensus 59 ~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~ 138 (508)
++++++|++|++.|+.++.++|.++|+++++.|.++.++++++++.|+||++.+++.|+...++.+++++...+...+..
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~~~~~~ 80 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARRLHGEV 80 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999888777654433
Q ss_pred ccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeE
Q 010506 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIF 218 (508)
Q Consensus 139 ~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~ 218 (508)
......+...+.+++|+|||++|+|||||+...++.+++||++||+||+|||+.+|.++..++ ++|.++|+|+|++
T Consensus 81 ~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~----~~l~~ag~p~~~~ 156 (432)
T cd07078 81 IPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLA----ELLAEAGLPPGVL 156 (432)
T ss_pred ccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHH----HHHHHcCCCcCcE
Confidence 222223446677899999999999999999999999999999999999999999999998764 5577899999999
Q ss_pred EEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcC
Q 010506 219 TSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAG 297 (508)
Q Consensus 219 ~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~G 297 (508)
++++| +.+.+..|++|+++|.|.||||..+++.|.+.++++++|+++|+||+|++||++|+|++.|++.|++++|.++|
T Consensus 157 ~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~G 236 (432)
T cd07078 157 NVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236 (432)
T ss_pred EEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccC
Confidence 99998 44588999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC-CC
Q 010506 298 QRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES-EG 376 (508)
Q Consensus 298 q~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~-~g 376 (508)
|.|+++++||||++++++|+++|+++++++++|+|.++++++||+++..+.+++.++++++.++|+++++||...+. .|
T Consensus 237 q~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g 316 (432)
T cd07078 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKG 316 (432)
T ss_pred CCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976432 58
Q ss_pred ceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCC
Q 010506 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIP 455 (508)
Q Consensus 377 ~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~ 455 (508)
+|++|||+ .++++++++++|+||||++|++|++++|||+++|+.++||+++|||+|.+.+++++ .++++|+|+||++
T Consensus 317 ~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~--~~~~~g~v~iN~~ 394 (432)
T cd07078 317 YFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVA--ERLEAGTVWINDY 394 (432)
T ss_pred cEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH--HhcCcceEEECCC
Confidence 99999988 57888999999999999999999999999999999999999999999999999999 7899999999997
Q ss_pred CCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 456 TNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 456 ~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
+....+..||||+|.||+|+++|++++++|++.|+++
T Consensus 395 ~~~~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 395 SVGAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 6655677999999999999999999999999999885
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-79 Score=641.80 Aligned_cols=446 Identities=17% Similarity=0.258 Sum_probs=384.8
Q ss_pred CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChh
Q 010506 32 HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP 111 (508)
Q Consensus 32 ~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 111 (508)
++....++||+|++.+++++.+ |++.+|++|++|++.|+.+++.+|.++|++++++|.+++++|+++++.|+||+..
T Consensus 63 ~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~ 139 (549)
T cd07127 63 SGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFM 139 (549)
T ss_pred CCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHH
Confidence 5678999999999999899988 8999999999999999999999999999999999999999999999999999998
Q ss_pred hhhh-----hHHHHHHHHHHHhhhhhhhcCCcc---cCCCCCc---eeEEEEeecceEEEEeCCCCchhhhHHHHHHHhh
Q 010506 112 EGIG-----EVQEVIDMCDFAVGLSRQLNGSVI---PSERPNH---MMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180 (508)
Q Consensus 112 ~a~~-----ev~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 180 (508)
++.. |++..++.++|++...+.+.+... +...... .....++|+||+++|+|||||+++.+.++++||+
T Consensus 140 ~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALa 219 (549)
T cd07127 140 MAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLA 219 (549)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHh
Confidence 8762 799999999998887665543221 1111000 1123679999999999999999999999999999
Q ss_pred cCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC--ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhh
Q 010506 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG--GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258 (508)
Q Consensus 181 aGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g--~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~ 258 (508)
+||+||+|||+.+|+++..+.+++.++|.++|+|+|+||+|++ +.+.++.|+.||+|+.|.||||+.+|+.|++.++
T Consensus 220 aGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~- 298 (549)
T cd07127 220 TGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANAR- 298 (549)
T ss_pred cCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhc-
Confidence 9999999999999999988888899999999999999999997 3678999999999999999999999999999987
Q ss_pred ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecc---------cHHHHHHHHHHhhhhccc
Q 010506 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHES---------IYQTVLDQLVDVYKQVKI 329 (508)
Q Consensus 259 ~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~---------i~~~f~~~L~~~~~~~~~ 329 (508)
.+++++|+||||++||++|+|++.+++.+++|+|.|+||.|++++|||||++ +||+|+++|+++++++ +
T Consensus 299 -~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~ 376 (549)
T cd07127 299 -QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-L 376 (549)
T ss_pred -cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-c
Confidence 5799999999999999999999999999999999999999999999999999 8999999999999999 8
Q ss_pred CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCC-ceeccEEEe-cCCCCcccccccccceeEe
Q 010506 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---SEG-NFVQPTIVE-ISPTADIVKEELFAPVLYV 404 (508)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~---~~g-~~~~Ptv~~-~~~~~~~~~~E~fgPvl~v 404 (508)
|||.+..+++||+++..+++++.+ +++.|+ +++||.... ..| +|++|||+. +++++.+++||+||||++|
T Consensus 377 Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V 451 (549)
T cd07127 377 ADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFV 451 (549)
T ss_pred CCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEE
Confidence 999999999999999999999854 555565 778876532 134 466999884 5679999999999999999
Q ss_pred EEeCCHHHHHHHhccCC--C-CcEEEEecCCHHHHHHhhcccCcceeEEEEcCCC-CCCCCCCCccCCCCCCCCCcch-H
Q 010506 405 MKFQTFEEAVKINNSVP--Q-GLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPT-NGAEIGGAFGGEKATGGGREAG-S 479 (508)
Q Consensus 405 ~~~~~~~eai~~~n~~~--~-gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~-~~~~~~~pfGG~~~SG~g~~~g-~ 479 (508)
++|+|.+|||+++|++. + ||+++|||+|.+.++++..+..-..|+++||... .+..-.+||||++.||.+...| .
T Consensus 452 ~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~ 531 (549)
T cd07127 452 VATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAA 531 (549)
T ss_pred EEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccc
Confidence 99999999999999983 4 6999999999999999985434445699999421 1122225699999999987664 3
Q ss_pred HHHHHhhhe
Q 010506 480 DSWKQYMRR 488 (508)
Q Consensus 480 ~~~~~~~~~ 488 (508)
.....|...
T Consensus 532 ~~~~~fv~~ 540 (549)
T cd07127 532 LTDGAFVAN 540 (549)
T ss_pred cchhhhhhc
Confidence 333445544
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-79 Score=637.98 Aligned_cols=415 Identities=21% Similarity=0.254 Sum_probs=369.2
Q ss_pred HHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhc--C
Q 010506 59 EEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN--G 136 (508)
Q Consensus 59 ~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~--~ 136 (508)
++++++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||+ ++..|+...++.+++++...+... .
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~~~~~~ 80 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYSYRIPH 80 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHhccccc
Confidence 6789999999999999999999999999999999999999999999999999 667899999999999987765431 1
Q ss_pred CcccC--CCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCC-
Q 010506 137 SVIPS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL- 213 (508)
Q Consensus 137 ~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGl- 213 (508)
..... .......+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+ .+++.++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l----~~~l~~ag~~ 156 (442)
T cd07084 81 EPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIM----VRLLHYAGLL 156 (442)
T ss_pred cccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHH----HHHHHHhCCC
Confidence 11101 11123457789999999999999999999999999999999999999999999999876 455678898
Q ss_pred CCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCC-CHHHHHHHHHHHH
Q 010506 214 PGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDA-DIKLAVRSVLFAA 292 (508)
Q Consensus 214 P~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~da-Dl~~aa~~i~~~~ 292 (508)
|+|++|+|+|+.+.+..|+.||+++.|+||||+++|+.|++.+++ +|+++|+|||||+||++|| |++.+++.+++++
T Consensus 157 P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~ 234 (442)
T cd07084 157 PPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDM 234 (442)
T ss_pred CccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHH
Confidence 999999999954588999999999999999999999999998874 8999999999999999999 6999999999999
Q ss_pred HhhcCCCcCCCceEEEecc-cHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHC-CCeEeeCCc
Q 010506 293 VGTAGQRCTTCRRLLIHES-IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQ-GGKILTGGS 370 (508)
Q Consensus 293 ~~~~Gq~C~a~~~v~V~~~-i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~-ga~v~~gg~ 370 (508)
|.|+||.|+++++||||++ ++++|+++|+++++++++| ++++||+++. ++.++++++.++ |+++++||.
T Consensus 235 ~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~ 305 (442)
T cd07084 235 TACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGK 305 (442)
T ss_pred hcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCc
Confidence 9999999999999999999 9999999999999999988 6789998764 566667777788 489999997
Q ss_pred ccC------CCCceeccEEE-ecCCCC---cccccccccceeEeEEeCC--HHHHHHHhccCCCCcEEEEecCCHHHHHH
Q 010506 371 VIE------SEGNFVQPTIV-EISPTA---DIVKEELFAPVLYVMKFQT--FEEAVKINNSVPQGLSSSIFTRSPENIFK 438 (508)
Q Consensus 371 ~~~------~~g~~~~Ptv~-~~~~~~---~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~si~s~d~~~~~~ 438 (508)
..+ ..|+|++|||+ ++++++ .+++||+||||++|++|+| ++|+|+++|+++|||++||||+|.+.+++
T Consensus 306 ~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~ 385 (442)
T cd07084 306 ELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQE 385 (442)
T ss_pred ccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHH
Confidence 522 25899999987 688886 9999999999999999999 99999999999999999999999999999
Q ss_pred hhcccCc-ceeEEEEcCC-CCCCCCCCCccC-CCCCCCCCcc-hHHHHHHhhheeEE
Q 010506 439 WLGPHGS-DTGIVNVNIP-TNGAEIGGAFGG-EKATGGGREA-GSDSWKQYMRRSTC 491 (508)
Q Consensus 439 ~~~~~~~-~~g~V~iN~~-~~~~~~~~pfGG-~~~SG~g~~~-g~~~~~~~~~~k~v 491 (508)
++ .++ ++|+||||.. +.+..+..|||| .|.||+|++. |.+++++||+..++
T Consensus 386 ~~--~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 386 LI--GNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HH--HHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 99 789 9999999976 555666678876 8899999996 99999999987654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-79 Score=634.76 Aligned_cols=411 Identities=19% Similarity=0.217 Sum_probs=353.1
Q ss_pred HHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHH--HHHHHhhhhhhhc
Q 010506 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVID--MCDFAVGLSRQLN 135 (508)
Q Consensus 58 v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~--~~~~~~~~~~~~~ 135 (508)
+++++++|++||+.|+.+|+.+|.++|+++++.|++++++|+++++.|+|||+.+++.++...+. ..++++. ...
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~~---~~~ 77 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYKD---EKT 77 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhc---ccc
Confidence 47899999999999999999999999999999999999999999999999999998866554443 2222221 111
Q ss_pred CCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCC
Q 010506 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (508)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~ 215 (508)
+...+.. .+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+++.++|+|+
T Consensus 78 ~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~ 156 (439)
T cd07081 78 CGVLTGD-ENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPE 156 (439)
T ss_pred CceecCC-CCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCCh
Confidence 1111211 233457889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHh
Q 010506 216 AIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVG 294 (508)
Q Consensus 216 g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~ 294 (508)
|++|+|+| +.+.++.|+.||+|++|+||||+. +++.++++++|+++|+|||+|+||++|||++.|++.+++++|+
T Consensus 157 gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~ 232 (439)
T cd07081 157 NLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTF 232 (439)
T ss_pred hhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhc
Confidence 99999998 778899999999999999999998 5667778899999999999999999999999999999999999
Q ss_pred hcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCc-c-c
Q 010506 295 TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGS-V-I 372 (508)
Q Consensus 295 ~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~-~-~ 372 (508)
|+||.|++.+|||||+++||+|+++|+++. ||+++.++++++.++++++.+.|++++.|+. . .
T Consensus 233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~ 297 (439)
T cd07081 233 DNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIA 297 (439)
T ss_pred CCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHH
Confidence 999999999999999999999999998874 7999999999999999999999998754432 1 1
Q ss_pred CCCCceeccE---EE-ecC--CCCcccccccccceeEeEEeCCHHHHHHHhccC----CCCcEEEEecCC---HHHHHHh
Q 010506 373 ESEGNFVQPT---IV-EIS--PTADIVKEELFAPVLYVMKFQTFEEAVKINNSV----PQGLSSSIFTRS---PENIFKW 439 (508)
Q Consensus 373 ~~~g~~~~Pt---v~-~~~--~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~si~s~d---~~~~~~~ 439 (508)
...|+|++|| ++ +++ ++|.+++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++++
T Consensus 298 ~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~ 377 (439)
T cd07081 298 AAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQF 377 (439)
T ss_pred HHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHH
Confidence 1358899998 77 677 899999999999999999999999999999965 899999999999 9999999
Q ss_pred hcccCcceeEEEEcCCCCCCCCC--CCccCCCCC--CCCCcch-----HHHHHHhhheeEEEE
Q 010506 440 LGPHGSDTGIVNVNIPTNGAEIG--GAFGGEKAT--GGGREAG-----SDSWKQYMRRSTCTI 493 (508)
Q Consensus 440 ~~~~~~~~g~V~iN~~~~~~~~~--~pfGG~~~S--G~g~~~g-----~~~~~~~~~~k~v~~ 493 (508)
+ .++++|+|+||.++.....+ .-|||++.+ |.|..+| ..+.++|+++|.|.+
T Consensus 378 a--~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 378 A--NAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred H--hhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 9 88999999999876333222 256666544 4444332 235789999998865
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-79 Score=586.81 Aligned_cols=423 Identities=22% Similarity=0.337 Sum_probs=378.8
Q ss_pred HHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhh-hc
Q 010506 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQ-LN 135 (508)
Q Consensus 58 v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~-~~ 135 (508)
+++.++.+|.+|..-+..|.+.|.++|+++...+++|.+++.+++..|.+|+..++. .|+..+++.++++....+. ..
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 456689999999999999999999999999999999999999999999999999986 6898888888888776544 33
Q ss_pred CCcccCCCC--CceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCC
Q 010506 136 GSVIPSERP--NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL 213 (508)
Q Consensus 136 ~~~~~~~~~--~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGl 213 (508)
.+....... -...+.+.+|+|||++|+|||||+.+.+.++++||++||+||+|||+.+|.++..+++++-+. +
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-----l 158 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-----L 158 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-----c
Confidence 322221111 224567889999999999999999999999999999999999999999999999887776655 5
Q ss_pred CCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHH
Q 010506 214 PGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAV 293 (508)
Q Consensus 214 P~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~ 293 (508)
+.+.+.+|.|+.+....|+.+ +.|.|+||||+.+|+.|+.+|+++++|+++|||||+|++|++|+|++-++++|+|+++
T Consensus 159 d~~~~~VV~Ggv~ETt~LL~~-rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~ 237 (477)
T KOG2456|consen 159 DQDLIRVVNGGVPETTELLKQ-RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW 237 (477)
T ss_pred CcceEEEecCCCchHHHHHHh-hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh
Confidence 689999999976666666665 8999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC
Q 010506 294 GTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373 (508)
Q Consensus 294 ~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~ 373 (508)
.|+||.|.++++|+++.+++..++++++..++++. |+...++.+++-+++..+++|+...++.- .+|+.||.. |
T Consensus 238 ~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFY-G~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~-d 311 (477)
T KOG2456|consen 238 MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFY-GENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGES-D 311 (477)
T ss_pred ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHh-CCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCcc-c
Confidence 99999999999999999999999999999999987 55556688999999999999998877532 789999986 6
Q ss_pred CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEE
Q 010506 374 SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNV 452 (508)
Q Consensus 374 ~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~i 452 (508)
....|++|||+ ||++++++|+||+|||||+|+.|++++|+|+.||+.+-.|++|+||+|.+...++. .+...|.|.+
T Consensus 312 ~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l--~~tsSGgvt~ 389 (477)
T KOG2456|consen 312 ESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFL--TETSSGGVTV 389 (477)
T ss_pred hhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHH--HhccCCCeee
Confidence 66779999987 99999999999999999999999999999999999999999999999999999999 8899999999
Q ss_pred cCCC-CCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEe
Q 010506 453 NIPT-NGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 453 N~~~-~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 494 (508)
|+.. +.....+||||+|.||+|++||.++++.|++.|+|..+
T Consensus 390 ND~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~r 432 (477)
T KOG2456|consen 390 NDVIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLR 432 (477)
T ss_pred cceEEEEEeeccCcCCcCccccccccccccccccccchhhhhc
Confidence 9943 23334689999999999999999999999999999665
|
|
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-78 Score=629.29 Aligned_cols=410 Identities=22% Similarity=0.290 Sum_probs=351.4
Q ss_pred CCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhh
Q 010506 52 EASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLS 131 (508)
Q Consensus 52 ~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~ 131 (508)
....+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++|+++++.|+||++.+++. ..+++++...
T Consensus 32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~------~~~~~~~~~~ 105 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI------AKNVAAAEKT 105 (465)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH------HHHHHHHHHh
Confidence 3467899999999999999999999999999999999999999999999999999999988753 2233333322
Q ss_pred h---hhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHH
Q 010506 132 R---QLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208 (508)
Q Consensus 132 ~---~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l 208 (508)
. ....... .......+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++|
T Consensus 106 ~~~~~~~~~~~--~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l 183 (465)
T PRK15398 106 PGVEDLTTEAL--TGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAI 183 (465)
T ss_pred ccccccccCcc--cCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHH
Confidence 1 1111111 1122345677899999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHH
Q 010506 209 ERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRS 287 (508)
Q Consensus 209 ~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~ 287 (508)
.++|+|+|++|+|++ +.+.++.|++||+||.|+||||+.+|+.|++ ..+|+++|+|||||+||++|||++.|++.
T Consensus 184 ~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~Aa~~ 259 (465)
T PRK15398 184 VAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKAARD 259 (465)
T ss_pred HHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHHHHH
Confidence 999999999999998 6788999999999999999999999999988 36899999999999999999999999999
Q ss_pred HHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEee
Q 010506 288 VLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILT 367 (508)
Q Consensus 288 i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~ 367 (508)
|++|+|.|+||.|++++|||||+++||+|+++|+++. +|+++..+++++.++++++.+++++++.
T Consensus 260 i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~~~ 324 (465)
T PRK15398 260 IVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKKWV 324 (465)
T ss_pred HHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccchhhh
Confidence 9999999999999999999999999999999998761 2689999999999999865444567777
Q ss_pred CCcc---cCCCCcee---ccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCc--EEEEecCCHHHHHH
Q 010506 368 GGSV---IESEGNFV---QPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGL--SSSIFTRSPENIFK 438 (508)
Q Consensus 368 gg~~---~~~~g~~~---~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~si~s~d~~~~~~ 438 (508)
||.. .+..|+++ +|||+ ++++++++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++
T Consensus 325 g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~ 404 (465)
T PRK15398 325 GKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNK 404 (465)
T ss_pred CCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHH
Confidence 7643 12246666 37876 7999999999999999999999999999999999999988 99999999999999
Q ss_pred hhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCC--CCcc--hHHHHHHhhheeEEEE
Q 010506 439 WLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGG--GREA--GSDSWKQYMRRSTCTI 493 (508)
Q Consensus 439 ~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~--g~~~--g~~~~~~~~~~k~v~~ 493 (508)
++ .++++|+|+||.++. +.+||||+|.|.+ |... |...-+.|++.+.+++
T Consensus 405 ~a--~~l~~G~V~iN~~~~---~~~p~gg~~~s~~~~~~~~g~~~~~~~~~~~~~~~~~ 458 (465)
T PRK15398 405 MA--RAIQTSIFVKNGPSY---AGLGLGGEGFTTFTIATPTGEGVTSARTFTRRRRCVL 458 (465)
T ss_pred HH--HhCCceEEEECCCCc---cccCcCCCCCceeeecccCCCCccchhhhhhheeecc
Confidence 99 889999999998743 4689999999985 2222 3333456666655543
|
|
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-76 Score=618.34 Aligned_cols=418 Identities=16% Similarity=0.155 Sum_probs=364.5
Q ss_pred CCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh-hHHHHHHHHHHHhhh
Q 010506 52 EASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGL 130 (508)
Q Consensus 52 ~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~ 130 (508)
..+.+++++++++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+||+..+.+. +.......+..++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 4578899999999999999999999999999999999999999999999999999999888653 222333444444332
Q ss_pred hhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHh
Q 010506 131 SRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFER 210 (508)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~ 210 (508)
.+.. +. .. ...+...+..++|+|||++|+|||||+.++.+++++||++||+||+|||+.+|.++..++++|.+++.+
T Consensus 84 ~~~~-G~-~~-~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~e 160 (488)
T TIGR02518 84 MKTI-GI-LS-EDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEE 160 (488)
T ss_pred Cccc-ce-ec-CCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHH
Confidence 2222 21 11 122345677899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHH
Q 010506 211 NKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVL 289 (508)
Q Consensus 211 aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~ 289 (508)
+|+|+|++|+|++ +.+.++.|++||+||+|+||||+.+++. ++.+.+|+++|+|||+|+||++|||++.|++.++
T Consensus 161 aGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~----a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv 236 (488)
T TIGR02518 161 AGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKA----AYSSGTPAIGVGPGNGPAYIERTANVKKAVRDII 236 (488)
T ss_pred cCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHH----HHHcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHH
Confidence 9999999999998 7889999999999999999999996544 4556899999999999999999999999999999
Q ss_pred HHHHhhcCCCcCCCceEEEecccHHHHHHHHHHh-------hhhcccCCC-CCCCCccCCCCCHHHHHHHHHHHHHHHHC
Q 010506 290 FAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV-------YKQVKIGDP-LEKGTLLGPLHTPESRKNFEKGIENIKSQ 361 (508)
Q Consensus 290 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~-------~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ 361 (508)
+|+|+|+||.|++.++||||+++||+|+++|+++ .+.+++|+| .++++++||+++.++++++.++++.++++
T Consensus 237 ~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~ 316 (488)
T TIGR02518 237 DSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPE 316 (488)
T ss_pred HHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCC
Confidence 9999999999999999999999999999999998 888999996 67889999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhcc----CCCCcEEEEecCCHHHHH
Q 010506 362 GGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS----VPQGLSSSIFTRSPENIF 437 (508)
Q Consensus 362 ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~si~s~d~~~~~ 437 (508)
|+++++||.. .+++++++ ++|+||||++|++|+|++|||+++|+ ++|||+++|||+|.++++
T Consensus 317 gakll~gg~~-------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~ 382 (488)
T TIGR02518 317 DAKVLIGEQN-------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVR 382 (488)
T ss_pred CCEEEEeCCC-------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHH
Confidence 9999999853 24556665 79999999999999999999999887 699999999999999999
Q ss_pred HhhcccCcceeEEEEcCCCCC----CCCC------CCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010506 438 KWLGPHGSDTGIVNVNIPTNG----AEIG------GAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 438 ~~~~~~~~~~g~V~iN~~~~~----~~~~------~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
+|+ .++++|+|+||.+.+. +..+ +.||+++.++++ .+.+++++++.|+|...+
T Consensus 383 ~f~--~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 383 EFA--LKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGV 445 (488)
T ss_pred HHH--HhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEecc
Confidence 999 8899999999975422 2122 236666655555 388899999999998876
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-77 Score=613.35 Aligned_cols=412 Identities=18% Similarity=0.253 Sum_probs=357.7
Q ss_pred HHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh-hHHHHHH-HHHHHhhhhhhhc
Q 010506 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVID-MCDFAVGLSRQLN 135 (508)
Q Consensus 58 v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~-~~~~~~~~~~~~~ 135 (508)
++.++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||+.+++. ++...++ .+++++.. ...
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 4789999999999999999999999999999999999999999999999999999885 7777777 77777752 222
Q ss_pred CCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCC
Q 010506 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (508)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~ 215 (508)
+.. .. ..+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++|.++|+|+
T Consensus 79 g~~-~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~ 156 (436)
T cd07122 79 GVI-EE-DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPE 156 (436)
T ss_pred eee-cc-CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCc
Confidence 211 11 1233567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHh
Q 010506 216 AIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVG 294 (508)
Q Consensus 216 g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~ 294 (508)
|++|+|+| +.+.++.|++||+|+.|+||||+++++ .++++++|+++|+|||||+||++|||++.|++.+++|+|.
T Consensus 157 g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~ 232 (436)
T cd07122 157 GLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTF 232 (436)
T ss_pred hhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhc
Confidence 99999998 778899999999999999999999654 4567789999999999999999999999999999999999
Q ss_pred hcCCCcCCCceEEEecccHHHHHHHHHHhhhhc-------ccCCC-CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEe
Q 010506 295 TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQV-------KIGDP-LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366 (508)
Q Consensus 295 ~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~-------~~g~p-~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~ 366 (508)
|+||.|++++|||||+++||+|+++|+++...+ ++|++ .+.++.+||+++..+++++.++++.+...|++++
T Consensus 233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl 312 (436)
T cd07122 233 DNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVL 312 (436)
T ss_pred cCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEE
Confidence 999999999999999999999999999998877 88888 4667889999999999888887777777777777
Q ss_pred eCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccC----CCCcEEEEecCCHHHHHHhhcc
Q 010506 367 TGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV----PQGLSSSIFTRSPENIFKWLGP 442 (508)
Q Consensus 367 ~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~si~s~d~~~~~~~~~~ 442 (508)
.++.. +++++|+++ +|.||||++|++|+|++|||+++|++ +|||++||||+|.+++++++
T Consensus 313 ~~~~~-------------~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~-- 376 (436)
T cd07122 313 VAEET-------------GVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFA-- 376 (436)
T ss_pred EEecC-------------CCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHH--
Confidence 65522 567788887 56799999999999999999999997 89999999999999999999
Q ss_pred cCcceeEEEEcCCCCCCCCCCCccCC--------CCCCCCCcchHHHHHHhhheeEEEE
Q 010506 443 HGSDTGIVNVNIPTNGAEIGGAFGGE--------KATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 443 ~~~~~g~V~iN~~~~~~~~~~pfGG~--------~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
.++++|+||||.++.++..+..+.|. |..|.+...+..+.++|++.++|..
T Consensus 377 ~~l~aG~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 377 LRMPVSRILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNSTSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred hhCCceEEEEeCCccccccCccCCCCCceeeeeccccCCCcCCCCCChHHhheeEeecc
Confidence 88999999999987655444444422 2234444455667899999888743
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-76 Score=610.58 Aligned_cols=390 Identities=20% Similarity=0.266 Sum_probs=342.3
Q ss_pred HHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh----hhhh--------hhHHHHHH
Q 010506 55 LEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL----PEGI--------GEVQEVID 122 (508)
Q Consensus 55 ~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~ev~~~~~ 122 (508)
.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+. .+++ .|+..+++
T Consensus 3 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~ 82 (417)
T PRK00197 3 MEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAE 82 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999998887764 2443 57888899
Q ss_pred HHHHHhhhhhhhcCCcccCC--CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHH
Q 010506 123 MCDFAVGLSRQLNGSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200 (508)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l 200 (508)
.+++++.+.+.. +...+.. ..+...+.+++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++..+
T Consensus 83 ~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l 159 (417)
T PRK00197 83 GLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRAL 159 (417)
T ss_pred HHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHH
Confidence 999988766543 2222211 12235678899999999999886 4 67889999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCeEEEecC-C-hhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCC
Q 010506 201 TKLVSEVFERNKLPGAIFTSFCG-G-AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (508)
Q Consensus 201 ~~~l~~~l~~aGlP~g~~~~v~g-~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~d 278 (508)
++++.++|.++|+|+|++|+|+| + .+.++.|.+||++|.|+||||+.+|+.|++.+ .+|+++|+|||||+||++|
T Consensus 160 ~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~d 236 (417)
T PRK00197 160 VAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDES 236 (417)
T ss_pred HHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCC
Confidence 99999999999999999999996 5 44788888899999999999999999999875 5999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHH
Q 010506 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENI 358 (508)
Q Consensus 279 aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a 358 (508)
||++.|++.+++|+|.|+| .|++++|+|||+++||+|+++|++++++++++
T Consensus 237 Adl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 287 (417)
T PRK00197 237 ADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE---------------------------- 287 (417)
T ss_pred CCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe----------------------------
Confidence 9999999999999999999 99999999999999999999999999887542
Q ss_pred HHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHH
Q 010506 359 KSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438 (508)
Q Consensus 359 ~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~ 438 (508)
++ |+.. ..+ |+ |||+ ++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 288 ------~~-~~~~--~~~-~~-PTi~--~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~ 354 (417)
T PRK00197 288 ------LR-GDEA--ALA-LL-PDVV--PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAER 354 (417)
T ss_pred ------Ee-cCHH--HHH-hh-cccc--cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHH
Confidence 11 1110 012 22 9987 5679999999999999999999999999999999999999999999999999
Q ss_pred hhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC----CcchHHHHHHhhheeEEEEeC
Q 010506 439 WLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG----REAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 439 ~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g----~~~g~~~~~~~~~~k~v~~~~ 495 (508)
++ .++++|+|+||.++... +..||||.+.||+| +++|.+++++|++.|++++.+
T Consensus 355 ~~--~~l~~G~v~VN~~~~~~-~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 412 (417)
T PRK00197 355 FL--NEVDSAAVYVNASTRFT-DGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGD 412 (417)
T ss_pred HH--HhCCeeEEEEeCCCccC-CCCccccchhheeecCCCcCCCccchHhhcEEEEEEECC
Confidence 99 88999999999976543 46899999999999 999999999999999998754
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-76 Score=606.29 Aligned_cols=383 Identities=20% Similarity=0.245 Sum_probs=335.9
Q ss_pred HHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChh----hh--------hhhHHHHHHHHHHH
Q 010506 60 EGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP----EG--------IGEVQEVIDMCDFA 127 (508)
Q Consensus 60 ~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a--------~~ev~~~~~~~~~~ 127 (508)
..+++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+||+.. ++ ..|+..+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999999999999777766643 33 25888999999998
Q ss_pred hhhhhhhcCCcccCC--CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHH
Q 010506 128 VGLSRQLNGSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVS 205 (508)
Q Consensus 128 ~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~ 205 (508)
+...+.. +...+.. ..+...+.+++|+|||++|+|| +| .+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 82 a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~ 158 (406)
T cd07079 82 AALPDPV-GEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQ 158 (406)
T ss_pred HhcCCCC-cccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHH
Confidence 8665432 2222211 1123456789999999999996 55 7788999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCeEEEecC-Ch-hhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHH
Q 010506 206 EVFERNKLPGAIFTSFCG-GA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKL 283 (508)
Q Consensus 206 ~~l~~aGlP~g~~~~v~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~ 283 (508)
++|.++|+|+|++|+|+| +. +.++.|.+||++|+|+||||+.+|+.|++.+ .+|+++|+|||||+||++|||++.
T Consensus 159 ~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~~ 235 (406)
T cd07079 159 EALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLEM 235 (406)
T ss_pred HHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHHH
Confidence 999999999999999998 54 6788899999999999999999999999877 699999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCC
Q 010506 284 AVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG 363 (508)
Q Consensus 284 aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga 363 (508)
|++.+++|+|.|+| .|++++|||||+++||+|+++|++++++. |+
T Consensus 236 Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~----------------------------------ga 280 (406)
T cd07079 236 AVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALREA----------------------------------GV 280 (406)
T ss_pred HHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC----------------------------------CC
Confidence 99999999999999 99999999999999999999999877652 45
Q ss_pred eEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhccc
Q 010506 364 KILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPH 443 (508)
Q Consensus 364 ~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~ 443 (508)
+++.|+.. ..|++|| ++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++ .
T Consensus 281 ~~~~g~~~----~~~~~pt---v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~--~ 351 (406)
T cd07079 281 ELRGDEET----LAILPGA---KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFL--R 351 (406)
T ss_pred EEecCHHH----HHhcccc---cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHH--H
Confidence 54433221 1377888 7889999999999999999999999999999999999999999999999999999 8
Q ss_pred CcceeEEEEcCCCCCCCCCCCccCCCCCCC----CCcchHHHHHHhhheeEEEE
Q 010506 444 GSDTGIVNVNIPTNGAEIGGAFGGEKATGG----GREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 444 ~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~----g~~~g~~~~~~~~~~k~v~~ 493 (508)
++++|+|+||+++... ...||||.+.||+ |+++|.+++++|++.|++++
T Consensus 352 ~~~~G~v~iN~~~~~~-~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~ 404 (406)
T cd07079 352 EVDSAAVYVNASTRFT-DGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVR 404 (406)
T ss_pred hCCeeEEEEeCCCccc-CCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence 8999999999876543 4679999999988 99999999999999999865
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-75 Score=577.16 Aligned_cols=463 Identities=30% Similarity=0.475 Sum_probs=413.6
Q ss_pred hhhhcCCCCCCCCceecCEEecCCCeEEeecCCCCc-eEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHH
Q 010506 10 FLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQ-KIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIG 88 (508)
Q Consensus 10 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~g~-~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a 88 (508)
+|.....++=.-.-.++|+.+.+++..+++||++.+ ++++|..++.+|+++|++.|.+|++.|..+|+.+|+.+|++++
T Consensus 103 al~~~a~~~w~A~p~~~~~~~~~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raA 182 (769)
T COG4230 103 ALLASAGQKWQAAPIVNGAPVAGGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAA 182 (769)
T ss_pred HHHhhhhhhhccccccCCCcCCCCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHH
Confidence 333333333333446788877788899999999976 7899999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCch
Q 010506 89 DALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPC 168 (508)
Q Consensus 89 ~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 168 (508)
++++.+..+|..++++|-||+...+..|+.+++++|+||+...+...+. ...+|+|+|++|+|||||+
T Consensus 183 dlme~~m~~L~~L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~------------~~~~~~G~vVcISPWNFPL 250 (769)
T COG4230 183 DLMEAQMPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------------LTHRPLGPVVCISPWNFPL 250 (769)
T ss_pred HHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc------------cccCCCCcEEEECCCCchH
Confidence 9999999999999999999999999999999999999999887652211 2367999999999999999
Q ss_pred hhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHH
Q 010506 169 AVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTK 247 (508)
Q Consensus 169 ~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~ 247 (508)
..+..+++.||++||+|+-||.+++|+.+..-++ ++.++|+|++++|+++| +..+|..|+.++++++|+||||++
T Consensus 251 AIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~----ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTe 326 (769)
T COG4230 251 AIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVR----LLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTE 326 (769)
T ss_pred HHHHhHHHHHHHcCCccccCccccccHHHHHHHH----HHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHH
Confidence 9999999999999999999999999999877644 46799999999999999 778999999999999999999999
Q ss_pred HHHHHHHHhhhc---cCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhh
Q 010506 248 VGLMVQQTVHQR---FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVY 324 (508)
Q Consensus 248 ~g~~i~~~a~~~---~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~ 324 (508)
+++.|.++.+++ ..|++.|+||-|++||+.+|--++++..++.|+|..+||+|.+.+.+++++++.|..++.|+-++
T Consensus 327 vA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm 406 (769)
T COG4230 327 VARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAM 406 (769)
T ss_pred HHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHH
Confidence 999999988773 35789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceeccEEEecCCCCcccccccccceeE
Q 010506 325 KQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIVEISPTADIVKEELFAPVLY 403 (508)
Q Consensus 325 ~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~-~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~ 403 (508)
.++++|+|..-.+++||+|+....+.+.++|+..+..|-.+..-....+ ..|.|+.||+++++.- ..++.|+|||||.
T Consensus 407 ~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~-~eL~rEVFGPVLH 485 (769)
T COG4230 407 AELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENL-DELQREVFGPVLH 485 (769)
T ss_pred HHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcCCH-HHHHHHhccceeE
Confidence 9999999999999999999999999999999999888755543222212 4799999999987743 4468899999999
Q ss_pred eEEeC--CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCC-CCccCCCCCCCCCc-chH
Q 010506 404 VMKFQ--TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGEKATGGGRE-AGS 479 (508)
Q Consensus 404 v~~~~--~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~-~pfGG~~~SG~g~~-~g~ 479 (508)
|++|+ ++++.|+-+|.++|||+.+|||+-++.+.++. .+..+|++|||....++..+ .||||.|-||+|-. +|+
T Consensus 486 VvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~--~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp 563 (769)
T COG4230 486 VVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVT--ERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGP 563 (769)
T ss_pred EEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHH--hhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCCh
Confidence 99994 69999999999999999999999999999998 88999999999988777666 49999999999955 589
Q ss_pred HHHHHhhheeEE
Q 010506 480 DSWKQYMRRSTC 491 (508)
Q Consensus 480 ~~~~~~~~~k~v 491 (508)
.-+..|+..+..
T Consensus 564 ~YL~Rl~~~~p~ 575 (769)
T COG4230 564 LYLLRLVSERPW 575 (769)
T ss_pred HHHHHHHhcCCc
Confidence 888888876543
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-75 Score=563.18 Aligned_cols=478 Identities=26% Similarity=0.404 Sum_probs=420.4
Q ss_pred hhhhhcCCCCCCCCceecCEEecCCCeEEeecCCCCc-eEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHH
Q 010506 9 EFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQ-KIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQI 87 (508)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~g~-~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~ 87 (508)
-+++++.....++++.|||+.+.+.......+|++++ +++.+..++.+++++||++|.+|++.|..+|..+|.+|++|.
T Consensus 48 ~A~~~~~~~~~evP~vIg~~~v~t~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkA 127 (561)
T KOG2455|consen 48 KALKELQKRPLEVPLVIGDKEVYTNDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKA 127 (561)
T ss_pred HHHHHHhcCceeccEEECCeeeecCCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHH
Confidence 4667777777899999999999888889999999987 689999999999999999999999999999999999999999
Q ss_pred HHHHH-HhHHHHHHHHHHHhCCChhhhhh-hHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeec-ceEEEEeCC
Q 010506 88 GDALR-EKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPL-GVVGVITAF 164 (508)
Q Consensus 88 a~~l~-~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~ 164 (508)
|+++. +.+-+|....+.-.||...+|.- -+.++++++|+.+..+..+.........++.....+++|+ |.|++|+||
T Consensus 128 Adlistkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPF 207 (561)
T KOG2455|consen 128 ADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPF 207 (561)
T ss_pred HHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEeccc
Confidence 99998 66777777778888999999864 4889999999998888776654333333444445578898 999999999
Q ss_pred CCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEe
Q 010506 165 NFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFT 243 (508)
Q Consensus 165 n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ft 243 (508)
||-........+| ..|||+|+||||..+.++++.+ .++|++||+|+|++|+|++ +...++.+..+|.+.++.||
T Consensus 208 nftAI~gnLa~aP-aLMGN~VLwkPS~ta~lssYii----~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnft 282 (561)
T KOG2455|consen 208 NFTAIGGNLAGAP-ALMGNVVLWKPSDTAALSSYII----YRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFT 282 (561)
T ss_pred ceeeeccccccCh-hhhcceeeecccchhHHHHHHH----HHHHHHcCCCccceeeccCCCCeecceeccCcccceeeee
Confidence 9987433333334 5579999999999999999876 4567899999999999999 88999999999999999999
Q ss_pred CCHHHHHHHHHHhhhc------cCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHH
Q 010506 244 GSTKVGLMVQQTVHQR------FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317 (508)
Q Consensus 244 Gs~~~g~~i~~~a~~~------~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~ 317 (508)
||+.+-+.+++..+++ ..+++.|.||||.-+|+++||++.++...++++|.++||.|.+++|+||+++.++.+.
T Consensus 283 gS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~ 362 (561)
T KOG2455|consen 283 GSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIR 362 (561)
T ss_pred cccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHH
Confidence 9999999999988763 4689999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcccCCC-CCCCCccCCCCCHHHHHHHHHHHHHHHHC-CCeEeeCCcccCCCCceeccEEEe-cCCCCcccc
Q 010506 318 DQLVDVYKQVKIGDP-LEKGTLLGPLHTPESRKNFEKGIENIKSQ-GGKILTGGSVIESEGNFVQPTIVE-ISPTADIVK 394 (508)
Q Consensus 318 ~~L~~~~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~v~~a~~~-ga~v~~gg~~~~~~g~~~~Ptv~~-~~~~~~~~~ 394 (508)
+.|.+..+++++||| .|.++++||+|+...++|+.++++.++.. ..++++||+.+|..|+|++|||+. -+|.+++|.
T Consensus 363 e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ 442 (561)
T KOG2455|consen 363 EELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMT 442 (561)
T ss_pred HHHHHHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhh
Confidence 999999999999998 88899999999999999999999999875 478999999988899999999875 568999999
Q ss_pred cccccceeEeEEeCC--HHHHHHHh-ccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCC-CCccCCCC
Q 010506 395 EELFAPVLYVMKFQT--FEEAVKIN-NSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGEKA 470 (508)
Q Consensus 395 ~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~-~pfGG~~~ 470 (508)
||+|||||+|+.|+| ++|+++++ |.+.|||+++||++|.+.+.+.....+..+|+.|||+-++++..+ .||||.+.
T Consensus 443 ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~ 522 (561)
T KOG2455|consen 443 EEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARL 522 (561)
T ss_pred hhccCceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccc
Confidence 999999999999965 99999998 678999999999999999999887778889999999988777665 59999999
Q ss_pred CCCCCcc-hHHHHHHhhheeEE
Q 010506 471 TGGGREA-GSDSWKQYMRRSTC 491 (508)
Q Consensus 471 SG~g~~~-g~~~~~~~~~~k~v 491 (508)
||+.... |++-+..|+.++++
T Consensus 523 SGTNDKaGgp~~l~RwtSp~~i 544 (561)
T KOG2455|consen 523 SGTNDKAGGPHYLLRWTSPLSI 544 (561)
T ss_pred cCCCCCCCCceEEEeecCcchh
Confidence 9998665 55555556655544
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-74 Score=561.14 Aligned_cols=447 Identities=26% Similarity=0.499 Sum_probs=409.8
Q ss_pred CCceecCEEe--cCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH--hccCChhHHHHHHHHHHHHHHHhHH
Q 010506 21 PGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 21 ~~~~i~g~~~--~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
..+||+|+++ .+++++..+||.++.+|++++.++..|+++|+.+|+.||+. |++++..+|.+.+.++++++++|++
T Consensus 422 h~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~e 501 (881)
T KOG2452|consen 422 HQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQE 501 (881)
T ss_pred HhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccc
Confidence 3469999999 46688999999999999999999999999999999999974 9999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCC--CCC-ceeEEEEeecceEEEEeCCCCchhhhH
Q 010506 97 HLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSE--RPN-HMMLETWNPLGVVGVITAFNFPCAVLG 172 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~~ 172 (508)
+|+.+.+.+.|.-...+. .-+...++.+||++.+.+.+++...|.. +++ ..+++.++|+|||++|.|||||+..+.
T Consensus 502 elat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmls 581 (881)
T KOG2452|consen 502 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLS 581 (881)
T ss_pred hhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHH
Confidence 999999999997766664 4566778999999999999988766543 343 356789999999999999999999999
Q ss_pred HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHH
Q 010506 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (508)
Q Consensus 173 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (508)
|+.+.+|++- -..+ .+ - .|++|+++| ++-++..|..||+++.|-||||+++|+.
T Consensus 582 wk~aaclaa~--------------~~k~----~e----~---sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~ 636 (881)
T KOG2452|consen 582 WKTAACLAAQ--------------VLKF----AE----L---TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 636 (881)
T ss_pred HHHHHHHHHH--------------Hhhh----hh----h---cceEEEecCCcchhccccccCCccceeccccchHHHHH
Confidence 9999988751 0111 11 1 689999999 8889999999999999999999999999
Q ss_pred HHHHhhh-ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccC
Q 010506 252 VQQTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (508)
Q Consensus 252 i~~~a~~-~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g 330 (508)
|++.|+. +.+++.+|+||++|+||..|||+++|+..-+.+.|++-|..|++..|+||.++|.|+|+.++++..+++++|
T Consensus 637 im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig 716 (881)
T KOG2452|consen 637 IMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVG 716 (881)
T ss_pred HHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccC
Confidence 9999886 458999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeC-
Q 010506 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ- 408 (508)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~- 408 (508)
+|+|.+++-||.-...+..++..|++.+++.|+++++||++.++.|+|++|||+ +++..+.+.+||-||||+.|.+|+
T Consensus 717 ~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d 796 (881)
T KOG2452|consen 717 NPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFAD 796 (881)
T ss_pred CcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCC
Confidence 999999999999999999999999999999999999999999999999999988 899999999999999999999996
Q ss_pred -CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhh
Q 010506 409 -TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487 (508)
Q Consensus 409 -~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~ 487 (508)
|+++.++.+|.+++||+++|||+|...+.+++ ..+.+|+|+||... ..+...||||+++||+|...|..++.+|.+
T Consensus 797 ~d~~~vl~ran~tefgla~gvftrd~~k~l~v~--~~l~agtvfvnty~-ktdvaapfggfkqsgfgkd~ge~alneyl~ 873 (881)
T KOG2452|consen 797 GDLDAVLSRANATEFGLASGVFTRDINKALYVS--DKLQAGTVFVNTYN-KTDVAAPFGGFKQSGFGKDLGEAALNEYLR 873 (881)
T ss_pred CCHHHHHhhccccccccccceeecccchhhhhh--hhhccceEEEeecc-ccccccCCCCccccccccchhHHHHhhhee
Confidence 49999999999999999999999999999998 78999999999853 355678999999999999999999999999
Q ss_pred eeEEEEeC
Q 010506 488 RSTCTINY 495 (508)
Q Consensus 488 ~k~v~~~~ 495 (508)
.|+|++.|
T Consensus 874 ~ktit~ey 881 (881)
T KOG2452|consen 874 VKTVTFEY 881 (881)
T ss_pred eEEEEeeC
Confidence 99999875
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-73 Score=617.78 Aligned_cols=380 Identities=22% Similarity=0.241 Sum_probs=334.5
Q ss_pred HHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHH------HHHhC--CChhhh----hhhHHHHHHHH
Q 010506 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLL------SIEMG--KILPEG----IGEVQEVIDMC 124 (508)
Q Consensus 57 ~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~------~~e~G--k~~~~a----~~ev~~~~~~~ 124 (508)
.+++++++|++|++.|+.+|.++|.++|+++++.|+++.++|++++ ++|+| ||+.++ ..|+..+++.+
T Consensus 295 ~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~ 374 (718)
T PLN02418 295 GAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASI 374 (718)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999996 77999 888776 45999999999
Q ss_pred HHHhhhhhhhcCCccc-C-CCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHH
Q 010506 125 DFAVGLSRQLNGSVIP-S-ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202 (508)
Q Consensus 125 ~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~ 202 (508)
++++...+. .+...+ . ...+...+..++|+|||++|+||| |+.+. +++++||++||+||+|||+.+|+++..+++
T Consensus 375 ~~~a~~~~~-~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~~ 451 (718)
T PLN02418 375 RQLADMEDP-IGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILHK 451 (718)
T ss_pred HHHhcCccc-cCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHHH
Confidence 999987433 333322 1 112334577899999999999999 99998 899999999999999999999999988755
Q ss_pred HHHHHHHhCCCCCCe----EEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCC
Q 010506 203 LVSEVFERNKLPGAI----FTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (508)
Q Consensus 203 ~l~~~l~~aGlP~g~----~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~d 278 (508)
+ +.++ +|+|+ +|+|+|+.+.++.|..||+|++|+||||+. .+++.++++++|+++|+|||||+||++|
T Consensus 452 l----~~eA-lP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~---~i~~~aa~~~k~v~lELGGk~p~iV~~D 523 (718)
T PLN02418 452 V----ITDA-IPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNK---LVSQIKASTKIPVLGHADGICHVYVDKS 523 (718)
T ss_pred H----HHHH-ccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHH---HHHHHHHhcCCCEEEeCCCcceEEEeCC
Confidence 4 5667 88885 999998678899999999999999999996 4555566678999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHH
Q 010506 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENI 358 (508)
Q Consensus 279 aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a 358 (508)
||++.|++.+++++|.| ||.|++.+|+|||+++||+ | .+.++|+++
T Consensus 524 ADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~a 569 (718)
T PLN02418 524 ADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVAL 569 (718)
T ss_pred CCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHHH
Confidence 99999999999999999 9999999999999999986 1 257889999
Q ss_pred HHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHH
Q 010506 359 KSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438 (508)
Q Consensus 359 ~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~ 438 (508)
+++|+++ +||...+ | ++.+ ++|.+++||+|||+++|++|+|+||||+++|+++|||+++|||+|.+++.+
T Consensus 570 ~~~Ga~l-~Gg~~~~--g------~l~~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~ 639 (718)
T PLN02418 570 RSAGVTL-YGGPRAS--K------LLNI-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEI 639 (718)
T ss_pred HHCCCEE-ECCcccc--C------eeCC-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHH
Confidence 9999999 6886532 4 2333 789999999999999999999999999999999999999999999999999
Q ss_pred hhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCC--CCcc--hHHHHHHhhheeEEEEe
Q 010506 439 WLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGG--GREA--GSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 439 ~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~--g~~~--g~~~~~~~~~~k~v~~~ 494 (508)
++ +++++|.||||.++.+. ...||||+|.||+ ||++ |++++++|++.|+|++-
T Consensus 640 ~a--~~l~aG~V~IN~~~~~~-~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g 696 (718)
T PLN02418 640 FL--RQVDSAAVFHNASTRFS-DGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRG 696 (718)
T ss_pred HH--HhCCeeEEEEeCCCCCC-CCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEEC
Confidence 99 88999999999876443 4679999999999 9886 99999999999999774
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-73 Score=636.30 Aligned_cols=421 Identities=20% Similarity=0.221 Sum_probs=365.9
Q ss_pred EEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh-hHHHHHHHHHHH
Q 010506 49 TVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFA 127 (508)
Q Consensus 49 ~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~ 127 (508)
.+..++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+|||..+++. +....+..++++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~ 84 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS 84 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence 3456889999999999999999999999999999999999999999999999999999999998874 333333444333
Q ss_pred hhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHH
Q 010506 128 VGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (508)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~ 207 (508)
.. .+...+. . ...+....+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 85 ~~-~~~~~g~-~-~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~ 161 (862)
T PRK13805 85 YK-DEKTVGV-I-EEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA 161 (862)
T ss_pred hc-CCCcccc-c-CcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence 22 1111111 1 1112344677899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHH
Q 010506 208 FERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVR 286 (508)
Q Consensus 208 l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~ 286 (508)
+.++|+|+|++|+|+| +.+.++.|++|++||.|+||||+.++ +.++++++|+++|+|||||+||++|||++.|++
T Consensus 162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa~ 237 (862)
T PRK13805 162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTADIKRAVN 237 (862)
T ss_pred HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCCHHHHHH
Confidence 9999999999999998 78899999999999999999999964 455678999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeE-
Q 010506 287 SVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI- 365 (508)
Q Consensus 287 ~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v- 365 (508)
.|++|+|+|+||.|+++++||||+++||+|+++|+++. +|+++..+++++.++++++.+.+++.
T Consensus 238 ~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~~~ 302 (862)
T PRK13805 238 DILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG---------------AYFLNKKELKKLEKFIFGKENGALNAD 302 (862)
T ss_pred HHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC---------------CeeCCHHHHHHHHHHHhhccCCCcCcc
Confidence 99999999999999999999999999999999998762 57999999999999999886655432
Q ss_pred eeCCccc---CCCCceeccEE------E-ecCCCCcccccccccceeEeEEeCCHHHHHHHhcc----CCCCcEEEEecC
Q 010506 366 LTGGSVI---ESEGNFVQPTI------V-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS----VPQGLSSSIFTR 431 (508)
Q Consensus 366 ~~gg~~~---~~~g~~~~Ptv------~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~si~s~ 431 (508)
++||... ...|+|++||+ + ++++++++++ |+||||++|++|+|++|||+++|+ ++|||+++|||+
T Consensus 303 ~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~ 381 (862)
T PRK13805 303 IVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTN 381 (862)
T ss_pred ccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECC
Confidence 4566431 12488899985 4 5778888876 799999999999999999999988 489999999999
Q ss_pred CHHHHHHhhcccCcceeEEEEcCCCC---------CCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010506 432 SPENIFKWLGPHGSDTGIVNVNIPTN---------GAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 432 d~~~~~~~~~~~~~~~g~V~iN~~~~---------~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
|.+.+++|+ .++++|+|+||.++. ...+++|||| |.||.|+++|+.|+++|++.|+|..+.
T Consensus 382 d~~~~~~~~--~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~ 451 (862)
T PRK13805 382 DDELIKEFG--LRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRR 451 (862)
T ss_pred CHHHHHHHH--hhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeecc
Confidence 999999999 889999999999752 3456789997 999999999999999999999997653
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-70 Score=563.38 Aligned_cols=376 Identities=15% Similarity=0.133 Sum_probs=333.2
Q ss_pred HHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-----------hhHHHHHHHHHHHhhhh
Q 010506 63 KACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-----------GEVQEVIDMCDFAVGLS 131 (508)
Q Consensus 63 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-----------~ev~~~~~~~~~~~~~~ 131 (508)
++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+||++.++. .|+...++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3689999999999999999999999999999999999999999999965432 47888888888887654
Q ss_pred hhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhC
Q 010506 132 RQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERN 211 (508)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~a 211 (508)
....+...+. ....+.+++|+|||++|+|||||+. .++++++||++||+||+|||+.+|+++..+++++.+++ ++
T Consensus 81 ~~~~~~~~~~---~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~-~~ 155 (397)
T cd07077 81 GHIQDVLLPD---NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAAD-AA 155 (397)
T ss_pred CcccceEecC---CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHh-hc
Confidence 4433322221 2356789999999999999999999 99999999999999999999999999999988877764 47
Q ss_pred CCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHH
Q 010506 212 KLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLF 290 (508)
Q Consensus 212 GlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~ 290 (508)
|+|+++++++++ +.+.++.|+.||++|.|+||||+.+++.+.+.+. .+|+++|+|||+++||++|||++.|++.+++
T Consensus 156 g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~ 233 (397)
T cd07077 156 HGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSVHD 233 (397)
T ss_pred CCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHHHH
Confidence 899999999997 7788999999999999999999999999988874 7899999999999999999999999999999
Q ss_pred HHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCc
Q 010506 291 AAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGS 370 (508)
Q Consensus 291 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~ 370 (508)
++|+| ||.|+++++||||+++||+|+++|+++++. .|++++.||.
T Consensus 234 ~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~ 278 (397)
T cd07077 234 SKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQETK 278 (397)
T ss_pred hhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCce
Confidence 99999 999999999999999999999999988764 4667766653
Q ss_pred ccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHH----HHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcc
Q 010506 371 VIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFE----EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSD 446 (508)
Q Consensus 371 ~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~ 446 (508)
++|+.|| +++.+.++|+||||++|++|+|++ +|++++|+++|||+++|||+|.+.+++++ .+++
T Consensus 279 -----~~~~~pt-----~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~--~~l~ 346 (397)
T cd07077 279 -----PLSKETT-----PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFV--QYID 346 (397)
T ss_pred -----eeEEecc-----CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHH--HhCC
Confidence 4677776 678899999999999999999986 66678899999999999999999999999 8899
Q ss_pred eeEEEEcCCCCCCC-CCCCccCCC--CCCCCCcch-HHHHHHhhheeEEE
Q 010506 447 TGIVNVNIPTNGAE-IGGAFGGEK--ATGGGREAG-SDSWKQYMRRSTCT 492 (508)
Q Consensus 447 ~g~V~iN~~~~~~~-~~~pfGG~~--~SG~g~~~g-~~~~~~~~~~k~v~ 492 (508)
+|+|+||.++.... ..+||||.+ .||+|+++| .+++++|++.|+|+
T Consensus 347 ~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 347 TASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred EEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 99999998765432 557999999 899999999 99999999999885
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-70 Score=555.21 Aligned_cols=378 Identities=20% Similarity=0.216 Sum_probs=322.0
Q ss_pred HHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHH------HHHHhCCCh------hhhhhhHHHHHHHHHHHhhhhh
Q 010506 65 CSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRL------LSIEMGKIL------PEGIGEVQEVIDMCDFAVGLSR 132 (508)
Q Consensus 65 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~------~~~e~Gk~~------~~a~~ev~~~~~~~~~~~~~~~ 132 (508)
|++||+.|+++|.++|.++|+++++.|+++.++|+++ ++.|+|||. .+++.|+..+++.+++++..++
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 5788999999999999999999999999999999999 999999993 3466899999999999998776
Q ss_pred hhcCCcccC--CCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHh
Q 010506 133 QLNGSVIPS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFER 210 (508)
Q Consensus 133 ~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~ 210 (508)
.. ++..+. ..++...+.+++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+++++.++|.+
T Consensus 81 ~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~e 157 (398)
T TIGR00407 81 PV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQ 157 (398)
T ss_pred CC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHH
Confidence 54 333322 123446678899999999999997 6 678889999999999999999999999999999999999999
Q ss_pred CCCCCCeEEEecC-Ch-hhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHH
Q 010506 211 NKLPGAIFTSFCG-GA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSV 288 (508)
Q Consensus 211 aGlP~g~~~~v~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i 288 (508)
+|+|+|++|+|+| +. +.++.|..||+||+|+||||+.+++.+++. ..+|+++|+|||||+||++|||++.|++.+
T Consensus 158 aGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~~~~e~gGk~p~iV~~dADl~~Aa~~i 234 (398)
T TIGR00407 158 TGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIPVLGHGDGICHIYLDESADLIKAIKVI 234 (398)
T ss_pred cCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCCEEEecCCcceEEEeCCCCHHHHHHHH
Confidence 9999999999997 54 578889999999999999999999998775 357999999999999999999999999999
Q ss_pred HHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeC
Q 010506 289 LFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTG 368 (508)
Q Consensus 289 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~g 368 (508)
++|+|.+ ||.|++++|||||+++||+|+++|+++++++++ .++. .+.+++++. .|
T Consensus 235 v~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~----~g------ 289 (398)
T TIGR00407 235 VNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLE----LG------ 289 (398)
T ss_pred HhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHh----cc------
Confidence 9999965 999999999999999999999999999987643 1221 123333332 11
Q ss_pred CcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCccee
Q 010506 369 GSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTG 448 (508)
Q Consensus 369 g~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g 448 (508)
| ||+++++ +.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++++++ .++++|
T Consensus 290 ~-----------~tv~~~~--~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a--~~i~~G 354 (398)
T TIGR00407 290 P-----------ATEAIVC--KTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQ--NGVDSA 354 (398)
T ss_pred C-----------ccccccc--cccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHH--HhCCee
Confidence 1 3554443 689999999999999999999999999999999999999999999999999 889999
Q ss_pred EEEEcCCCCCCCCCCCccCCCCC----CCCCcchHHHHHHhhhee
Q 010506 449 IVNVNIPTNGAEIGGAFGGEKAT----GGGREAGSDSWKQYMRRS 489 (508)
Q Consensus 449 ~V~iN~~~~~~~~~~pfGG~~~S----G~g~~~g~~~~~~~~~~k 489 (508)
.|+||.++.+. .+.|||=-..- +.....|+.+++.||.+|
T Consensus 355 ~v~iN~~~~~~-~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 355 AVYHNASTRFT-DGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred EEEEeCCCCcC-CCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 99999976543 45789832322 334445999999999875
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-68 Score=582.06 Aligned_cols=384 Identities=18% Similarity=0.200 Sum_probs=322.2
Q ss_pred HHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh----------------hHHHH
Q 010506 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG----------------EVQEV 120 (508)
Q Consensus 57 ~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~----------------ev~~~ 120 (508)
+++..+++|++||+.|+.+|.++|.++|+++++.|+++.++|+ .++||++.+++. |+..+
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 3888899999999999999999999999999999999999986 578888877654 36677
Q ss_pred HHHHHHHhhhhhhhcCCcccC-C-CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHH
Q 010506 121 IDMCDFAVGLSRQLNGSVIPS-E-RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198 (508)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~ 198 (508)
++.++++++..+ ..+...+. . ..+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|.++.
T Consensus 363 ~~~l~~~a~~~~-~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~ 439 (715)
T TIGR01092 363 AISLRQLAAMED-PIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNA 439 (715)
T ss_pred HHHHHHHhcCCC-cccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHH
Confidence 788888876422 22222211 1 11233567899999999999999 9998 589999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCC
Q 010506 199 AITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (508)
Q Consensus 199 ~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~d 278 (508)
.+++++.++| ..|.|++++++|++..+.++.|..|+++|+|+||||+.+|+.|++.++ +|+++|+|||||+||++|
T Consensus 440 ~l~~l~~~al-p~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~d 515 (715)
T TIGR01092 440 ILHKVITEAI-PIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKS 515 (715)
T ss_pred HHHHHHHHHc-CCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECCC
Confidence 8877665542 233344579999876677888999999999999999999999999875 999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHH
Q 010506 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENI 358 (508)
Q Consensus 279 aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a 358 (508)
||++.|++.++.++|. +||.|++++|||||+++||+ | .+.++++++
T Consensus 516 ADl~~A~~~i~~~~~~-~GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~v~~~ 561 (715)
T TIGR01092 516 ASVDMAKRIVRDAKCD-YPAACNAMETLLVHKDLLRN-------------------------G--------LLDDLIDML 561 (715)
T ss_pred CCHHHHHHHHHHHhCC-CCCccccCcEEEEehhhccc-------------------------h--------hHHHHHHHH
Confidence 9999998777666655 59999999999999999984 0 256778888
Q ss_pred HHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHH
Q 010506 359 KSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438 (508)
Q Consensus 359 ~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~ 438 (508)
.++|++++ ||...+ .|+. ..++++.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++
T Consensus 562 ~~~Ga~l~-Gg~~~~---~~~~----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~ 633 (715)
T TIGR01092 562 RTEGVTIH-GGPRFA---AYLT----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEF 633 (715)
T ss_pred HHCCCEEE-CCcchh---heec----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHH
Confidence 88999985 775422 2332 135689999999999999999999999999999999999999999999999999
Q ss_pred hhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCC----cchHHHHHHhhheeEEEEeCC
Q 010506 439 WLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGR----EAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 439 ~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~----~~g~~~~~~~~~~k~v~~~~~ 496 (508)
|+ .++++|.|+||.++. ...+.||||+|.||+|+ .+|++++++|++.|+|++..+
T Consensus 634 ~~--~~i~sG~V~vN~~~~-~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g 692 (715)
T TIGR01092 634 FL--QHVDSAAVFHNASTR-FSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKG 692 (715)
T ss_pred HH--HhCCeeEEEEeCCCC-CCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECCC
Confidence 99 889999999998754 34578999999999995 379999999999999987653
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-68 Score=542.86 Aligned_cols=363 Identities=37% Similarity=0.646 Sum_probs=335.2
Q ss_pred HHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCC
Q 010506 64 ACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER 143 (508)
Q Consensus 64 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (508)
+|++|++.|+.++.++|.++|+++++.|.++.++|+++++.|+|||+.+++.|+...++.+++++...+...+.......
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPELPSPD 81 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 68899999999999999999999999999999999999999999999999999999999999999887766543333333
Q ss_pred CCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC
Q 010506 144 PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG 223 (508)
Q Consensus 144 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g 223 (508)
.+...+.+++|+|||++|.|||+|+...++.+++||++||+||+|||+.+|.++..+ .++|.++|+|+|++++++|
T Consensus 82 ~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l----~~~l~~ag~p~~~v~~~~~ 157 (367)
T cd06534 82 PGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALAL----AELLQEAGLPPGVVNVVPG 157 (367)
T ss_pred CCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHH----HHHHHhcCCCcCeEEEEEc
Confidence 445667889999999999999999999999999999999999999999999999876 5567889999999999999
Q ss_pred -ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCC
Q 010506 224 -GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTT 302 (508)
Q Consensus 224 -~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a 302 (508)
+.+.++.|+.|+++|.|.||||+++++.|.+.++++++|+++|+||+|++||++|+|++.|++.+++++|.++||.|++
T Consensus 158 ~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s 237 (367)
T cd06534 158 GGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA 237 (367)
T ss_pred CchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence 5568899999999999999999999999999999889999999999999999999999999999999999999999999
Q ss_pred CceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccE
Q 010506 303 CRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPT 382 (508)
Q Consensus 303 ~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Pt 382 (508)
+++||||++++|+|+++|+ |
T Consensus 238 ~~~v~v~~~~~~~f~~~l~------------------------------------------------------------t 257 (367)
T cd06534 238 ASRLLVHESIYDEFVEKLV------------------------------------------------------------T 257 (367)
T ss_pred CcEEEEcHHHHHHHHHhhc------------------------------------------------------------e
Confidence 9999999999999999887 4
Q ss_pred EE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCC
Q 010506 383 IV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEI 461 (508)
Q Consensus 383 v~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~ 461 (508)
|+ .++++++++++|+|||+++|++|++++||++++|++++||++||||+|.+.+++++ .++++|+|+||+++....+
T Consensus 258 l~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~--~~~~~g~v~iN~~~~~~~~ 335 (367)
T cd06534 258 VLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA--ERLRAGTVYINDSSIGVGP 335 (367)
T ss_pred eeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHH--HhCCcceEEECCCCCCCCC
Confidence 33 45667899999999999999999999999999999999999999999999999999 7899999999997765467
Q ss_pred CCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 462 GGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 462 ~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
..||||.+.||+|+++|++++++|++.|++.
T Consensus 336 ~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 336 EAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 7899999999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=323.17 Aligned_cols=389 Identities=20% Similarity=0.219 Sum_probs=318.0
Q ss_pred HHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHh------CCChhhh------hhhHHHHHHH
Q 010506 56 EDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEM------GKILPEG------IGEVQEVIDM 123 (508)
Q Consensus 56 ~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~------Gk~~~~a------~~ev~~~~~~ 123 (508)
.++.+..++|++|...+..++.++|.+.|.++++.|+++.+++.++...|. |.+...- ...++.+++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 357788899999999999999999999999999999999999988887764 3322211 1246677778
Q ss_pred HHHHhhhhhhhcCCcccCCCC-CceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHH
Q 010506 124 CDFAVGLSRQLNGSVIPSERP-NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202 (508)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~ 202 (508)
++..+.+.+++.........+ +...+..+.|+||+++| |...+.......+.||++||+||||.+..+..++..+++
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~ 160 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVE 160 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHH
Confidence 888887777665433333333 34566788999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCeEEEecC--ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCC
Q 010506 203 LVSEVFERNKLPGAIFTSFCG--GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDAD 280 (508)
Q Consensus 203 ~l~~~l~~aGlP~g~~~~v~g--~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daD 280 (508)
++++.|.++|+|++.+|+|+. ...+.+.|..+..||.|+..||....+.|.+.+. .|++-.+-|++++||+.+||
T Consensus 161 ~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyvd~~AD 237 (417)
T COG0014 161 VIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYVDESAD 237 (417)
T ss_pred HHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEecccCC
Confidence 999999999999999999987 4566777777899999999999998888888765 78888888999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH
Q 010506 281 IKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360 (508)
Q Consensus 281 l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~ 360 (508)
+|+|.+.++.+++...+ .|++.+.++||+.+.++|+..|.+.+....+--.- +. .....+.+
T Consensus 238 ld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gvelr~----------d~----~~~~~~~~--- 299 (417)
T COG0014 238 LDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEAGVELRG----------DA----EALALLPD--- 299 (417)
T ss_pred HHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhcCeEEEc----------CH----HHHHhccc---
Confidence 99999999999999999 99999999999999999999999888743220000 00 11111100
Q ss_pred CCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhh
Q 010506 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (508)
Q Consensus 361 ~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~ 440 (508)
.+ .+.....|..|++.+++.|..++++++||++||..+.+||-+|.|+|...+++|.
T Consensus 300 --------------~~---------~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~ 356 (417)
T COG0014 300 --------------AV---------KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFV 356 (417)
T ss_pred --------------cC---------CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHH
Confidence 00 2234566889999999999999999999999999999999999999999999999
Q ss_pred cccCcceeEEEEcCCCCCCCCCCCccCCCCCCC----CCcchHHHHHHhhheeEEEE
Q 010506 441 GPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGG----GREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 441 ~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~----g~~~g~~~~~~~~~~k~v~~ 493 (508)
.+++...||||.++.+.+ +.-||=-..-|+ ....|+.|++++|..|++..
T Consensus 357 --~~VDSAaVyvNASTRFtD-G~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~ 410 (417)
T COG0014 357 --NEVDSAAVYVNASTRFTD-GGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVR 410 (417)
T ss_pred --hhcchheEEEeccccccc-CccccCceEEEeecCcccCCCCCChhhhcceeEEEe
Confidence 889999999999988765 333432223333 33459999999999999865
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-34 Score=294.44 Aligned_cols=356 Identities=13% Similarity=0.127 Sum_probs=251.8
Q ss_pred CHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHH----HhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHH--HH
Q 010506 54 SLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALR----EKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCD--FA 127 (508)
Q Consensus 54 ~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~----~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~--~~ 127 (508)
+..++++.++..+...+....++.++..+++.++.+.+. ..+.+..+.+..-+|.+...-+..+..+...++ ..
T Consensus 3 ~~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l 82 (422)
T cd07080 3 SAPDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENL 82 (422)
T ss_pred CHHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHH
Confidence 345566666666666666778888888888888888874 344566666777778776665555555544443 11
Q ss_pred hhh-hhhhc-CCcccCCCC-CceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHH
Q 010506 128 VGL-SRQLN-GSVIPSERP-NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLV 204 (508)
Q Consensus 128 ~~~-~~~~~-~~~~~~~~~-~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l 204 (508)
... .+.+. ...+....+ ....+..++|+||+++|+|||+|+ ..++.+++||++||++|+|||+.+|.++..+.+
T Consensus 83 ~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~-- 159 (422)
T cd07080 83 ERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLR-- 159 (422)
T ss_pred HHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHH--
Confidence 111 11121 111112222 345567889999999999999999 789999999999999999999999999987754
Q ss_pred HHHHHhCCCCC----CeEEEe--cC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCcc-CeEEEc
Q 010506 205 SEVFERNKLPG----AIFTSF--CG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGN-NAIIIM 276 (508)
Q Consensus 205 ~~~l~~aGlP~----g~~~~v--~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~-~~~iV~ 276 (508)
+|.++ +|+ +.++++ +| +.+.++.|+.++ |.|+||||+++++.|++.++.+ +.++|+||| +++|++
T Consensus 160 --~l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~ 232 (422)
T cd07080 160 --SLADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVID 232 (422)
T ss_pred --HHHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEec
Confidence 45666 576 788888 46 555889899887 9999999999999999998844 568999999 556666
Q ss_pred CCC----CHHHHHHHHHHHHHhhcCCCcCCCceEEEeccc---HHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHH
Q 010506 277 DDA----DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESI---YQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRK 349 (508)
Q Consensus 277 ~da----Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i---~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~ 349 (508)
+++ |++.+++.++++++.|+||.|.|+++||||+++ +++|.++|.++++++....|.. ++ +.....
T Consensus 233 ~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~ 305 (422)
T cd07080 233 REALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESA 305 (422)
T ss_pred HHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHH
Confidence 668 999999999999999999999999999999999 9999999999998876433322 11 333333
Q ss_pred HHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEE
Q 010506 350 NFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428 (508)
Q Consensus 350 ~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si 428 (508)
++...-..+...+.+.... .+.+ -||+ .-++ .+. ...++-.+.|+++++++|++..++. +=-|+++
T Consensus 306 ~~~~~r~~~~~~~~~~~~~----~~~~----~~v~~~~~~--~~~-~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~ 372 (422)
T cd07080 306 KIARARLEAEFYELKGGVS----RDLG----WTVIISDEI--GLE-ASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGL 372 (422)
T ss_pred HHHHHHHHHHHHHHhcCCC----CCCC----eEEEEeCCC--Ccc-CCCCcCEEEEEEcchHHHHHHhhhh--hcceeEe
Confidence 4333322222222211110 1111 2333 2221 111 2466778999999999999999986 5569999
Q ss_pred ecCCHHHHHHhh
Q 010506 429 FTRSPENIFKWL 440 (508)
Q Consensus 429 ~s~d~~~~~~~~ 440 (508)
+..+.+. .+++
T Consensus 373 ~~~~~~~-~~~~ 383 (422)
T cd07080 373 APSPAEL-AELA 383 (422)
T ss_pred ecChhhH-HHHH
Confidence 9888776 4444
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=254.23 Aligned_cols=385 Identities=21% Similarity=0.224 Sum_probs=299.0
Q ss_pred HHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHH------HhCCChhhh------hhhHHHHHHHHH
Q 010506 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSI------EMGKILPEG------IGEVQEVIDMCD 125 (508)
Q Consensus 58 v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~------e~Gk~~~~a------~~ev~~~~~~~~ 125 (508)
+++..+.||.+...++.++.++|.++|.++++.|..+..++..+... +.|.....- -+.+..+...++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 45667889999999999999999999999999998887666554443 445322111 123444555555
Q ss_pred HHhhhhhhhcCCcccCC-CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHH
Q 010506 126 FAVGLSRQLNGSVIPSE-RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLV 204 (508)
Q Consensus 126 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l 204 (508)
..+...+.......... .++...+....|+||.++| |....-.+..-.+.|+++||.+++|....+..+...+.+++
T Consensus 82 ~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v 159 (433)
T KOG4165|consen 82 QIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLV 159 (433)
T ss_pred HHHhcccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHH
Confidence 55553333322111111 2344456677899999999 99888888877788999999999999999999999999999
Q ss_pred HHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHH
Q 010506 205 SEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLA 284 (508)
Q Consensus 205 ~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~a 284 (508)
.+++.+.|.|.+.+++|....++.+.|..+..||.|+..||+...+.|..... +|+..+.-|.+.+||++|||+++|
T Consensus 160 ~~al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~dad~~kA 236 (433)
T KOG4165|consen 160 QEALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDKDADLDKA 236 (433)
T ss_pred HHHhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEeccccCHHHH
Confidence 99999999999999999988889999999999999999999999999877754 899999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCcCCCceEEEeccc-HHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCC
Q 010506 285 VRSVLFAAVGTAGQRCTTCRRLLIHESI-YQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG 363 (508)
Q Consensus 285 a~~i~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga 363 (508)
.+.+..+++.+.. .|++++.+++|++. ...|.+.|...++. +|.
T Consensus 237 ~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~~----------------------------------~gV 281 (433)
T KOG4165|consen 237 KRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLKE----------------------------------EGV 281 (433)
T ss_pred HHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHHh----------------------------------cCe
Confidence 9999999998887 99999999999983 23444444433322 233
Q ss_pred eEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhccc
Q 010506 364 KILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPH 443 (508)
Q Consensus 364 ~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~ 443 (508)
++.+|.+. ..-..|- ++...-++.|+-.-.++|-.+++.++||++||..+.+|+-+|.|+|.+.++.|. .
T Consensus 282 tl~agpkl-~~~l~~~-------p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl--~ 351 (433)
T KOG4165|consen 282 TLHAGPKL-AALLKFS-------PPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFL--K 351 (433)
T ss_pred EEecChhH-HhhcCcC-------CchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHH--h
Confidence 33332221 1111111 335566888999999999999999999999999999999999999999999999 7
Q ss_pred CcceeEEEEcCCCCCCCCCCCccCCCCCC--CCCcc--hHHHHHHhhheeEEEE
Q 010506 444 GSDTGIVNVNIPTNGAEIGGAFGGEKATG--GGREA--GSDSWKQYMRRSTCTI 493 (508)
Q Consensus 444 ~~~~g~V~iN~~~~~~~~~~pfGG~~~SG--~g~~~--g~~~~~~~~~~k~v~~ 493 (508)
+++...|+.|.++.+++ ++-||=--.-| ++|.| |+.|++-++..||+..
T Consensus 352 ~VDSa~vf~NASTRFaD-GfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lR 404 (433)
T KOG4165|consen 352 HVDSACVFHNASTRFAD-GFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLR 404 (433)
T ss_pred ccchhheeecccccccc-cccccccceeeeeccceeccCCccccceeeeeeEEe
Confidence 89999999999988765 56665333344 34554 9999999999998843
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-16 Score=161.87 Aligned_cols=337 Identities=14% Similarity=0.105 Sum_probs=209.8
Q ss_pred cCChhHHHHHHHHHHHHHHHh--HHHHHHHHHHHhCCChhhhhhhHHHHHHHHHH--Hhhhh-hhhcC-CcccCCCCCce
Q 010506 74 ELPAPKRGEVVRQIGDALREK--LHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF--AVGLS-RQLNG-SVIPSERPNHM 147 (508)
Q Consensus 74 ~~~~~~R~~~L~~~a~~l~~~--~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~--~~~~~-~~~~~-~~~~~~~~~~~ 147 (508)
.+|.++...+|.++++.+... .....+.+..-+|.+....+. ++.....++. ..... ..+.. ..+....+...
T Consensus 2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~~-l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~~ 80 (399)
T PF05893_consen 2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVEY-LEALMRWFRRENLERKLERELGNPESLDGWVPRGD 80 (399)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHHH-HHHHHHhcCHHHHHHHHHHhcCCHhHhhccccccc
Confidence 355666666666666666442 111444555556666555433 3333332211 00011 11111 11111122223
Q ss_pred eEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEe--cC-C
Q 010506 148 MLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSF--CG-G 224 (508)
Q Consensus 148 ~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v--~g-~ 224 (508)
.+..+.|.|++++|.|.|-|+. .++.++.+|.+||..|+|+|...+.++..+.+.|.++..+..+ ...+.++ ++ +
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~-~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l-~~~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLV-GFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPL-ADSIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccch-HHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchh-hhcEEEEEecCCc
Confidence 5567889999999999999975 4458889999999999999999999998887777665433222 2345666 44 5
Q ss_pred hhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCc
Q 010506 225 AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCR 304 (508)
Q Consensus 225 ~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~ 304 (508)
.++.+.+.+ ..|.++.+||.++.+.|.+.+. ...+.+.-..-.+..+|..+++++.+++.++.-.+...+|.|.|++
T Consensus 159 ~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~-~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~ 235 (399)
T PF05893_consen 159 EELEEALSQ--QADAVVAWGGDETIRAIRQPLP-PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQ 235 (399)
T ss_pred hHHHHHHHH--HCCEEEEeCCHHHHHHHHHHcC-CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCe
Confidence 667777764 5899999999999999988443 3344444444566778888889999999999999999999999999
Q ss_pred eEEEec---ccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHH-----HHHHCCCeEeeCCcccCCCC
Q 010506 305 RLLIHE---SIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE-----NIKSQGGKILTGGSVIESEG 376 (508)
Q Consensus 305 ~v~V~~---~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~-----~a~~~ga~v~~gg~~~~~~g 376 (508)
.|||.. .-.++|.++|.+++.+..---|.. ..+......+....+ .+...+.++. ++.. +
T Consensus 236 ~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~-------~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~----~ 303 (399)
T PF05893_consen 236 VIFVETGDGDSVEEFAERLAEALERAAERYPRG-------ELSIDEAAAISSLRAEAELRYALDGEYRVW-SSDD----N 303 (399)
T ss_pred EEEEECCCcccHHHHHHHHHHHHHHHHHhCCCc-------CCCHHHHHHHHHHHHHHHHHHHhcCCccee-ecCC----C
Confidence 999993 335788888877776543211211 112222222222222 2333333444 2211 1
Q ss_pred ceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCH
Q 010506 377 NFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433 (508)
Q Consensus 377 ~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~ 433 (508)
..||+.-+.. ......++-.+.|+++++++|++..++....=-|++++....
T Consensus 304 ---~~~V~~~~~~--~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~~ 355 (399)
T PF05893_consen 304 ---SWTVIVSPEP--PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWSE 355 (399)
T ss_pred ---CEEEEECCCc--ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecChh
Confidence 2344322211 233445577999999999999999999874313777765543
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.5e-13 Score=112.09 Aligned_cols=134 Identities=31% Similarity=0.451 Sum_probs=109.3
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCCCCceeccEEEecCCCCcc
Q 010506 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS-QGGKILTGGSVIESEGNFVQPTIVEISPTADI 392 (508)
Q Consensus 314 ~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~-~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~ 392 (508)
....+.|++..+.+++-+...++++. .+...++.++++.-.- +|..+..-|. .+|.|+.||++.|+|+|.+
T Consensus 9 ksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLsvtP~ms~ 80 (157)
T KOG2449|consen 9 KSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILSVTPNMSC 80 (157)
T ss_pred hhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEEecCCcce
Confidence 45667788888888887766677775 5667777777765211 1222222222 4789999999889999999
Q ss_pred cccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCC
Q 010506 393 VKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTN 457 (508)
Q Consensus 393 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~ 457 (508)
+.||+||||+..+.-++++|+|.++|+++||....|||.+.+.++.+. +..++|-|.+|.+..
T Consensus 81 ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~--~e~~a~qig~~~~ip 143 (157)
T KOG2449|consen 81 YKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFC--HEPDAGQIGANVPIP 143 (157)
T ss_pred eHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhh--cCCCccceecccccc
Confidence 999999999999999999999999999999999999999999999998 889999999998653
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.9e-09 Score=97.63 Aligned_cols=163 Identities=16% Similarity=0.210 Sum_probs=122.2
Q ss_pred CeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHH
Q 010506 271 NAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKN 350 (508)
Q Consensus 271 ~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 350 (508)
.-+||.+|.|++.|+..++.+.-.-- ...+...|+|||++.|+|+++++.+++.+. +... +. ..
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf--~~~~VatVlVqEsireefi~rvr~~m~pl~------~~va-----~H---pn 69 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPF--APGAVATVLVQESIREEFIERVRSRMKPLS------PQVA-----NH---PN 69 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCcc--cCCcEEEEEEeHHHHHHHHHHHHHhCccCC------hhhc-----cC---cH
Confidence 45899999999999999999875543 356788999999999999999999987653 2111 11 23
Q ss_pred HHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccC--CCCcEEE
Q 010506 351 FEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV--PQGLSSS 427 (508)
Q Consensus 351 ~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~--~~gl~~s 427 (508)
+.+.++....-+++++.++.. ..-..-.|.|+ +++. ..+.. -..+|+++..|++..||++++++. .| -+.|
T Consensus 70 y~rsl~~i~~l~~~~I~~~~~--~~~~~aSPilV~d~~h--~~fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f-~SVs 143 (215)
T PF07368_consen 70 YLRSLKKIKCLNAKTIVADFE--NVPPPASPILVCDFTH--SYFGD-GPTGVITLHTFRTPKEAIELCAKETLPF-DSVS 143 (215)
T ss_pred HHHHHHHHHhcCCeEEEeccc--CCCCCCCCEEEcCCCH--HHcCC-CCCeEEEEEccCCHHHHHHHHhcCCCCc-ceEE
Confidence 445556666678999887432 11123357655 5553 23333 456899999999999999999875 44 4999
Q ss_pred EecCCHHHHHHhhcccCcceeEEEEcCCCC
Q 010506 428 IFTRSPENIFKWLGPHGSDTGIVNVNIPTN 457 (508)
Q Consensus 428 i~s~d~~~~~~~~~~~~~~~g~V~iN~~~~ 457 (508)
||++-.+.+-+++ .++++..++||+...
T Consensus 144 iW~ekla~~Yel~--~~l~~~~f~iNC~~V 171 (215)
T PF07368_consen 144 IWNEKLASAYELA--ARLPCDTFYINCFNV 171 (215)
T ss_pred EeCcHHHHHHHHH--HhCCCCEEEEEeccC
Confidence 9999999999998 789999999999543
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.41 E-value=2e-06 Score=99.54 Aligned_cols=103 Identities=19% Similarity=0.195 Sum_probs=80.6
Q ss_pred CCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEe
Q 010506 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSF 221 (508)
Q Consensus 142 ~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v 221 (508)
+..+.....+..|+|++++|+||| ..++.+++.||++||+||+||++.++.. .+.+|..+.+.+
T Consensus 1066 GPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~~-------------~~~Lp~~~~~~~ 1129 (1208)
T PRK11905 1066 GPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAAA-------------LADLPGLVAARI 1129 (1208)
T ss_pred CCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHHH-------------HHhCcccccccc
Confidence 445566677889999999999999 4477799999999999999999986521 123455554444
Q ss_pred cCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCcee
Q 010506 222 CGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCL 264 (508)
Q Consensus 222 ~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~ 264 (508)
..+..+..+++++.|.|+||+++.+.|.++.+++.++++
T Consensus 1130 ----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Iv 1168 (1208)
T PRK11905 1130 ----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIV 1168 (1208)
T ss_pred ----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcc
Confidence 234467778899999999999999999999988876654
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.088 Score=53.93 Aligned_cols=264 Identities=17% Similarity=0.218 Sum_probs=123.0
Q ss_pred CCceeEEEEeecceEEEEeC---CCCchhhhHHHHHHHhhcCC--EEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeE
Q 010506 144 PNHMMLETWNPLGVVGVITA---FNFPCAVLGWNACIALVCGN--CVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIF 218 (508)
Q Consensus 144 ~~~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~l~~ALaaGN--~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~ 218 (508)
++.....++.|+--|++..| .-||-. ++....||-.+|. .|+.-|....-.....+ .-++..+|+-+ ++
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pSt-vlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~v----L~Aa~~~Gv~e-vy 169 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPST-VLMTAIPAKVAGVKEIVVCTPPPKDGKINPAV----LAAAHLAGVDE-VY 169 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--THH-HHHHHHHHHHHT-SEEEEEE-SS------HHH----HHHHHHTT-SE-EE
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccHH-HHHcccchhhcCCCeEEEEcCCCccCCCCHHH----HHHHHHcCCCE-EE
Confidence 45556678899999999999 446644 4447789988886 44556654411111111 12345666633 22
Q ss_pred EEecCChhhHHHHHc----CCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHh
Q 010506 219 TSFCGGAEIGQAIAK----DPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVG 294 (508)
Q Consensus 219 ~~v~g~~~~~~~L~~----~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~ 294 (508)
. -||.+.-.+|.- -|.||+|+=.|..=+...=....+.-.+- .+.++.---+|.+++||.+.++..++.-+=.
T Consensus 170 ~--vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID-~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEH 246 (412)
T PF00815_consen 170 K--VGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGID-MIAGPSEVLVIADETANPEFVAADLLAQAEH 246 (412)
T ss_dssp E----HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES-------EEEEEE-TTS-HHHHHHHHHHHHTT
T ss_pred e--cccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccC-CCCCCCceEEEECCCCCHHHHHHHHHHHhcc
Confidence 2 356665555553 48999999888765433211111111111 1111122235556689999998888765544
Q ss_pred hcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC
Q 010506 295 TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374 (508)
Q Consensus 295 ~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~ 374 (508)
... .+.++|..+ +++.+++.+.+.+..-. +-. .+. ++.+...
T Consensus 247 d~~-----a~~vLvt~s--~~la~~V~~~v~~~l~~-----------l~r---~~i----~~~sl~~------------- 288 (412)
T PF00815_consen 247 DPD-----AQAVLVTTS--EELAEAVEAEVERQLEE-----------LPR---REI----AEKSLEN------------- 288 (412)
T ss_dssp -TT------EEEEEES---HHHHHHHHHHHHHHHTT------------TT---HHH----HHHHHTT-------------
T ss_pred CCC-----CceEEEECC--HHHHHHHHHHHHHHHHh-----------CCc---hHH----HHHHHHC-------------
Confidence 332 234566555 44555555544432100 001 111 1222111
Q ss_pred CCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcC
Q 010506 375 EGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNI 454 (508)
Q Consensus 375 ~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~ 454 (508)
| .++.++|++||++++|..-. =-..|.++|.+....-. -.+|.|++..
T Consensus 289 ------------------------g---~ii~~~~l~ea~~~~N~~AP-EHLel~~~~~~~~~~~i----~~AGaiFlG~ 336 (412)
T PF00815_consen 289 ------------------------G---AIIVVDSLEEAIELANEYAP-EHLELQVEDPEELLEKI----RNAGAIFLGE 336 (412)
T ss_dssp ----------------------------EEEE-SSHHHHHHHHHHH---SEEEEESTTHHHHGGG------S-SEEEEST
T ss_pred ------------------------C---eEEEECCHHHHHHHHHHhhH-HHHHHHHcCHHHHHHHh----hccChhhcCC
Confidence 1 35567999999999998633 24678888886654333 4789999997
Q ss_pred CCC--------CCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 455 PTN--------GAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 455 ~~~--------~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
.+. +.+.-+| .+|..|+.|.-+...|+++.++
T Consensus 337 ~tp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~ 376 (412)
T PF00815_consen 337 YTPEALGDYAAGPNHVLP-----TGGTARFSSGLSVDDFLKRISV 376 (412)
T ss_dssp T--HHHHHHTSSS-----------TTGGGT---S-GGGGEEEEEE
T ss_pred CCCHHHhhhccCCCccCC-----CCccccccCCCcHHHccceeeE
Confidence 543 1122233 4466777777888899987655
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.095 Score=53.30 Aligned_cols=268 Identities=18% Similarity=0.261 Sum_probs=149.6
Q ss_pred CCCceeEEEEeecceEEEEeC---CCCchhhhHHHHHHHhhcCCE--EEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCe
Q 010506 143 RPNHMMLETWNPLGVVGVITA---FNFPCAVLGWNACIALVCGNC--VVWKGAPTTPLITIAITKLVSEVFERNKLPGAI 217 (508)
Q Consensus 143 ~~~~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~l~~ALaaGN~--VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~ 217 (508)
.++......++|+--|++..| .-||-..++ ...||-.+|+. |+..|.+..-.....| -+.+.+|+-+ +
T Consensus 105 ~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM-~avPAkvAGv~~Iv~~tPp~~~gv~p~iL-----~AA~~~Gv~e-I 177 (425)
T COG0141 105 EPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLM-NAVPAKVAGVEEIVVVTPPPKDGVNPEIL-----AAARLAGVDE-V 177 (425)
T ss_pred cCCcEEEEEEEEhhheEEEccCCCcCChHHHHH-hhccHhhcCCceEEEECCCCCCCCCHHHH-----HHHHHhCcHH-H
Confidence 455566778999999999999 777754444 77899999984 4455655421111111 1234455533 2
Q ss_pred EEEecCChhhHHHHHcC----CCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccC-eEEEcCCCCHHHHHHHHHHHH
Q 010506 218 FTSFCGGAEIGQAIAKD----PRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN-AIIIMDDADIKLAVRSVLFAA 292 (508)
Q Consensus 218 ~~~v~g~~~~~~~L~~~----~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~-~~iV~~daDl~~aa~~i~~~~ 292 (508)
++ -||.+.-.+|.-. +.||+|+=.|..=+.-+=.. .. ...-+=+..|-.. -+|-++++|.+..+..++.-+
T Consensus 178 y~--vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~-v~-g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQA 253 (425)
T COG0141 178 YK--VGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRL-VS-GVVGIDMIAGPSEVLVIADETANPDFVAADLLSQA 253 (425)
T ss_pred HH--ccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHH-hh-CCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 22 2577777777765 88999987777654322111 11 1111112222222 344455699999888887655
Q ss_pred HhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc
Q 010506 293 VGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI 372 (508)
Q Consensus 293 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~ 372 (508)
=.+. . .+.|+|..+ ++|.++..+++.+...- + .. .+. +.++..+
T Consensus 254 EHd~----~-a~aiLvT~s--~~la~~v~~~v~~~l~~-----------l-~~--~ei----~~~~l~~----------- 297 (425)
T COG0141 254 EHDP----D-AQAILVTDS--EELAEAVEAAVERQLET-----------L-PR--AEI----ARKALEN----------- 297 (425)
T ss_pred hcCC----C-ceEEEEeCc--HHHHHHHHHHHHHHHHh-----------c-cH--HHH----HHHHHHh-----------
Confidence 4332 2 344555554 45555555554432100 0 00 111 1111110
Q ss_pred CCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEE
Q 010506 373 ESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNV 452 (508)
Q Consensus 373 ~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~i 452 (508)
|| .|+-++|++|+++++|..-. --..|.++|......-. -++|.|++
T Consensus 298 -------------------------~g---~iilv~~l~ea~~~~N~~AP-EHLei~~~~p~~~l~~I----~nAGsIFl 344 (425)
T COG0141 298 -------------------------YG---AIILVDDLDEAVEISNEYAP-EHLELQTENPRELLGKI----RNAGSIFL 344 (425)
T ss_pred -------------------------CC---eEEEECCHHHHHHHHHhhCh-HhhhhhhcCHHHHHHHh----cccceeee
Confidence 01 45567999999999998733 24567888876654433 37899999
Q ss_pred cCCCCCCCCCCCccCC----CCCCCCCcchHHHHHHhhheeEE
Q 010506 453 NIPTNGAEIGGAFGGE----KATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 453 N~~~~~~~~~~pfGG~----~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
...+.-. .+--..|. ..+|+-|..+.-++..|+++.++
T Consensus 345 G~~sPe~-~GDY~aG~NHVLPT~g~AR~~s~L~v~dF~K~~tv 386 (425)
T COG0141 345 GHYSPES-LGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSTV 386 (425)
T ss_pred cCCCCcc-ccccccCCCccCCCCccchhcCCccHHHhhhHHHH
Confidence 9854311 01011121 34566777777788888886544
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.27 Score=50.08 Aligned_cols=265 Identities=17% Similarity=0.203 Sum_probs=143.5
Q ss_pred CCceeEEEEeecceEEEEeCCC---CchhhhHHHHHHHhhcCCE--EEeeCCCCC--hhHHHHHHHHHHHHHHhCCCCCC
Q 010506 144 PNHMMLETWNPLGVVGVITAFN---FPCAVLGWNACIALVCGNC--VVWKGAPTT--PLITIAITKLVSEVFERNKLPGA 216 (508)
Q Consensus 144 ~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~l~~ALaaGN~--VVlkps~~~--~~~~~~l~~~l~~~l~~aGlP~g 216 (508)
++.....++.|+--|++..|.- ||- +++...+||-.+|.. |+.-|.... .....+ -+...+|.-+
T Consensus 82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL------~aa~~~Gv~e- 153 (390)
T cd06572 82 PGVVLGQRYRPIERVGLYVPGGTAPYPS-TVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAIL------AAAKLAGVDE- 153 (390)
T ss_pred CCcEEEEEEEehhEEEEEecCCCCcchH-HHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHH------HHHHHcCCcE-
Confidence 4556677899999999999965 554 444467889888874 445565421 111111 1234555533
Q ss_pred eEEEecCChhhHHHHH----cCCCcCEEEEeCCHHHHHHHHHHhhhccCceeecc-CccC--eEEEcCCCCHHHHHHHHH
Q 010506 217 IFTSFCGGAEIGQAIA----KDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLEL-SGNN--AIIIMDDADIKLAVRSVL 289 (508)
Q Consensus 217 ~~~~v~g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~el-gG~~--~~iV~~daDl~~aa~~i~ 289 (508)
++. -||.+...+|. +-|.||.|+=.|..=+...=..-. ..+-..+ -|.+ -+|.+++||.+.++..++
T Consensus 154 iy~--vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~----g~V~ID~~AGPSEvlIiAD~~A~p~~vAaDLL 227 (390)
T cd06572 154 IYK--VGGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVS----GDVGIDMPAGPSEVLVIADETANPEFVAADLL 227 (390)
T ss_pred Eec--cCCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhc----CCcCccCCCCCceEEEEeCCCCCHHHHHHHHH
Confidence 221 25766666665 368899998777655433211111 1111111 1322 345555699999888887
Q ss_pred HHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCC
Q 010506 290 FAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369 (508)
Q Consensus 290 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg 369 (508)
.-+=.. -. .+.++|..+ .++.+++.+.+.+..-.-| . .+ .+..+..+
T Consensus 228 aQAEH~----~~-a~aiLvT~s--~~la~~V~~~v~~ql~~l~-----------r---~~----~~~~~~~~-------- 274 (390)
T cd06572 228 SQAEHD----PD-SQAILVTTS--EELAEAVEEEVERQLAELP-----------R---RE----IAAKSLLD-------- 274 (390)
T ss_pred hhhccC----CC-CeEEEEECC--HHHHHHHHHHHHHHHHhCC-----------c---HH----HHHHHHHh--------
Confidence 544332 12 334555544 3444444444432210000 0 01 11111111
Q ss_pred cccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeE
Q 010506 370 SVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGI 449 (508)
Q Consensus 370 ~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~ 449 (508)
--.++.++|++|+++++|..-. --.-|.++|.+....-. -.+|.
T Consensus 275 -------------------------------~g~ii~~~~~~eai~~~N~~AP-EHLel~~~~~~~~l~~i----~nAGs 318 (390)
T cd06572 275 -------------------------------YGAIILVDDLEEAIELANEYAP-EHLELQTEDPEELLEKI----RNAGS 318 (390)
T ss_pred -------------------------------CCEEEEECCHHHHHHHHHhhch-hhheeHhcCHHHHHhhC----ccceE
Confidence 0134567999999999998733 23567788877654433 47899
Q ss_pred EEEcCCCC--CCCCC-CCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 450 VNVNIPTN--GAEIG-GAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 450 V~iN~~~~--~~~~~-~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|++..++. ..+.. -|-.=-..+|..|..+.-+...|+++.++
T Consensus 319 iFlG~~tp~a~GDY~aGpNHvLPT~G~Ar~~sgL~v~~F~K~~s~ 363 (390)
T cd06572 319 IFLGPYTPEALGDYAAGPNHVLPTGGTARFYSGLSVDDFLKRITV 363 (390)
T ss_pred EeecCCCchhhhccccCCCCccCCCcceeecCCCCHHHheeccee
Confidence 99977543 11110 01111134566777777788899987655
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.31 Score=49.59 Aligned_cols=261 Identities=18% Similarity=0.242 Sum_probs=146.1
Q ss_pred CCceeEEEEeecceEEEEeCC---CCchhhhHHHHHHHhhcCCE--EEeeCCCCC-hhHHHHHHHHHHHHHHhCCCCCCe
Q 010506 144 PNHMMLETWNPLGVVGVITAF---NFPCAVLGWNACIALVCGNC--VVWKGAPTT-PLITIAITKLVSEVFERNKLPGAI 217 (508)
Q Consensus 144 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~--VVlkps~~~-~~~~~~l~~~l~~~l~~aGlP~g~ 217 (508)
++.....++.|+.-|++..|. -||- +++....||-.+|.. |+.-|.... ......+ -+...+|+-+ +
T Consensus 78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pS-tvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL-----~AA~~~Gv~e-I 150 (393)
T TIGR00069 78 PGVILGQRVRPLERVGLYVPGGRAPYPS-TVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVL-----AAAKLAGVDE-V 150 (393)
T ss_pred CCeEEEEEEEEeheEEEEeCCCCCcchH-HHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHH-----HHHHHcCCCe-e
Confidence 455566788999999999997 3554 444467799888874 445565321 1111111 1245566543 2
Q ss_pred EEEecCChhhHHHHH----cCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccC-ccC--eEEEcCCCCHHHHHHHHHH
Q 010506 218 FTSFCGGAEIGQAIA----KDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS-GNN--AIIIMDDADIKLAVRSVLF 290 (508)
Q Consensus 218 ~~~v~g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elg-G~~--~~iV~~daDl~~aa~~i~~ 290 (508)
+ --||.+.-.+|. +-|.||.|+=.|..=+...=.... ..+-..+- |.+ .+|-+++||.+.++..++.
T Consensus 151 y--~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~----g~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLa 224 (393)
T TIGR00069 151 Y--KVGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVF----GDVGIDMPAGPSEVLVIADETANPEFVAADLLS 224 (393)
T ss_pred h--hcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhc----CccCcCCCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence 1 135766666665 357899998777665433211111 12222211 333 3455556899998888876
Q ss_pred HHHhhcCCCcCCCceEEEecc--cHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeC
Q 010506 291 AAVGTAGQRCTTCRRLLIHES--IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTG 368 (508)
Q Consensus 291 ~~~~~~Gq~C~a~~~v~V~~~--i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~g 368 (508)
-+=... . .+.++|..+ +.++..+.+.+.+..+. . . +.++++..+
T Consensus 225 QAEHd~----~-a~~iLvT~s~~la~~V~~~v~~ql~~l~---------------r---~----~i~~~al~~------- 270 (393)
T TIGR00069 225 QAEHDP----D-AQAILVTTSEELAEAVQEEIERQLATLP---------------R---R----EIARKSLED------- 270 (393)
T ss_pred HhccCC----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHHHh-------
Confidence 543332 2 344555444 22344444433333321 0 1 112222221
Q ss_pred CcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCccee
Q 010506 369 GSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTG 448 (508)
Q Consensus 369 g~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g 448 (508)
+| .++.++|++||++++|..-.= -..|.++|......-. -++|
T Consensus 271 -----------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~~~l~~I----~nAG 313 (393)
T TIGR00069 271 -----------------------------NG---AIILVDDLEEAIEISNDYAPE-HLELQTKNPEELLPKI----RNAG 313 (393)
T ss_pred -----------------------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCHHHHHhhc----Cccc
Confidence 11 345679999999999987332 3457788876654433 4789
Q ss_pred EEEEcCCCC--CCCCCCCccC----CCCCCCCCcchHHHHHHhhheeEE
Q 010506 449 IVNVNIPTN--GAEIGGAFGG----EKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 449 ~V~iN~~~~--~~~~~~pfGG----~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
.|++...+. ..+. +.| ...+|..|..+.-+...|+++.++
T Consensus 314 aiFlG~~tp~a~GDY---~aG~NHvLPT~G~Ar~~sgL~v~~F~K~~s~ 359 (393)
T TIGR00069 314 SIFLGPYTPEAAGDY---AAGPNHVLPTGGTARFYSGLSVLDFLKRITV 359 (393)
T ss_pred eeccCCCCchhhhhc---cCCCCcccCCCcceeecCCccHHHhccceeE
Confidence 999976443 1111 112 134567788888889999988665
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.48 Score=48.79 Aligned_cols=267 Identities=18% Similarity=0.267 Sum_probs=147.8
Q ss_pred CCceeEEEEeecceEEEEeCC---CCchhhhHHHHHHHhhcCCE--EEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeE
Q 010506 144 PNHMMLETWNPLGVVGVITAF---NFPCAVLGWNACIALVCGNC--VVWKGAPTTPLITIAITKLVSEVFERNKLPGAIF 218 (508)
Q Consensus 144 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~--VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~ 218 (508)
++......+.|+--|++..|. -||- +++....||-.+|.. |+.-|..........+ -+.+.+|+-+ ++
T Consensus 110 ~Gv~~g~~~~Pi~~vG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~g~i~p~vL-----~AA~~~Gv~e-Iy 182 (425)
T PRK00877 110 PGVRLGQRWRPIERVGLYVPGGKAAYPS-SVLMNAIPAKVAGVKEIVMVTPPPDGEINPAIL-----AAAALAGVDE-VY 182 (425)
T ss_pred CCeEEEEEEEehHHeEEEccCCCCCchH-HHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHH-----HHHHHcCCCe-ee
Confidence 444556788999999999997 4664 444477899888874 4455653211111111 1245566543 22
Q ss_pred EEecCChhhHHHHH----cCCCcCEEEEeCCHHHHHHHHHHhhhccCceeecc-CccC--eEEEcCCCCHHHHHHHHHHH
Q 010506 219 TSFCGGAEIGQAIA----KDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLEL-SGNN--AIIIMDDADIKLAVRSVLFA 291 (508)
Q Consensus 219 ~~v~g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~el-gG~~--~~iV~~daDl~~aa~~i~~~ 291 (508)
. -||.+.-.+|. +-|.||.|+=.|..=+..+=.. . ...+-..+ -|.+ -+|-+++||.+.++..++.-
T Consensus 183 ~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~-v---~g~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQ 256 (425)
T PRK00877 183 K--VGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRL-V---FGVVGIDMIAGPSEILVIADETADPDFVAADLLSQ 256 (425)
T ss_pred c--cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHH-H---cCCcCcCCCCCCceeEEEeCCCCCHHHHHHHHHHH
Confidence 1 25777666665 3568999987776653322111 1 11222111 1333 34445569999998888765
Q ss_pred HHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcc
Q 010506 292 AVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV 371 (508)
Q Consensus 292 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~ 371 (508)
+=... . .+.++|..+ +++.+++.+.+.+...--| . . +.++++..+
T Consensus 257 AEHd~----~-a~aiLvT~s--~~la~~V~~~v~~ql~~l~-----------r---~----~ia~~sl~~---------- 301 (425)
T PRK00877 257 AEHDP----D-AQSILVTTS--EELAEAVAAEVERQLATLP-----------R---A----EIARASLEG---------- 301 (425)
T ss_pred hccCC----C-CcEEEEECC--HHHHHHHHHHHHHHHHhCC-----------h---H----HHHHHHHHh----------
Confidence 43332 2 344555444 3444444444332110000 0 0 112222211
Q ss_pred cCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEE
Q 010506 372 IESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVN 451 (508)
Q Consensus 372 ~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~ 451 (508)
+| .|+.++|++||++++|..-.= -..|.++|......-. -.+|.|+
T Consensus 302 --------------------------~g---~iivv~~leeai~~~N~~APE-HLel~~~~p~~~l~~I----~nAGaiF 347 (425)
T PRK00877 302 --------------------------QG---AIILVDDLEEAIELSNAYAPE-HLEIQTEDPRALLDRI----RNAGAIF 347 (425)
T ss_pred --------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCHHHHHhhc----Cccceec
Confidence 11 345679999999999987332 3557888876654333 4789999
Q ss_pred EcCCCC--CCCCCCCccC----CCCCCCCCcchHHHHHHhhheeEEEEeCC
Q 010506 452 VNIPTN--GAEIGGAFGG----EKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 452 iN~~~~--~~~~~~pfGG----~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
+...+. ..+. +.| -..+|..|..+.-+...|+++.++ +.++
T Consensus 348 lG~~tp~a~GDY---~aGpNHvLPT~G~AR~~sgLsV~~F~K~~s~-~~~s 394 (425)
T PRK00877 348 LGPYTPESLGDY---AAGPNHVLPTSGTARFSSGLSVYDFLKRSSV-IELS 394 (425)
T ss_pred cCCCCchhhhhc---ccCCCcccCCCcceeecCCccHHHhccceeE-EEEC
Confidence 966442 1111 112 235677888888889999988655 3443
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.61 Score=48.00 Aligned_cols=270 Identities=16% Similarity=0.173 Sum_probs=147.0
Q ss_pred CCceeEEEEeecceEEEEeCC---CCchhhhHHHHHHHhhcCCE--EEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeE
Q 010506 144 PNHMMLETWNPLGVVGVITAF---NFPCAVLGWNACIALVCGNC--VVWKGAPTTPLITIAITKLVSEVFERNKLPGAIF 218 (508)
Q Consensus 144 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~--VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~ 218 (508)
++.....++.|+.-|++..|. -||-. ++....||-.+|.. |+.-|..........+ . +...+|+-+ ++
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL----~-Aa~~~Gv~e-Iy 177 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVAS-AHMSVLTAKVAGVKRVIACTPPFPGEPPPAIV----A-AMHLAGADE-IY 177 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHH-HHHhhcchhhcCCCeEEEEeCCCCCCCCHHHH----H-HHHHcCCCe-eh
Confidence 444556788999999999996 46543 44477899888874 4455653311112111 1 235566533 22
Q ss_pred EEecCChhhHHHHH----cCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccC-ccC--eEEEcCCCCHHHHHHHHHHH
Q 010506 219 TSFCGGAEIGQAIA----KDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS-GNN--AIIIMDDADIKLAVRSVLFA 291 (508)
Q Consensus 219 ~~v~g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elg-G~~--~~iV~~daDl~~aa~~i~~~ 291 (508)
. -||.+.-.+|. +-|.||.|+=.|..=+...=... ...+-..+- |.+ -+|-+++||.+..+..++.-
T Consensus 178 ~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v----~g~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQ 251 (426)
T PRK12447 178 V--LGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQL----FGRVGIDLFAGPTETLVIADDTADPELVATDLLGQ 251 (426)
T ss_pred h--cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHh----cCccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHH
Confidence 1 25766666665 35789999877766543221111 122222111 333 34445568999988888765
Q ss_pred HHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcc
Q 010506 292 AVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV 371 (508)
Q Consensus 292 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~ 371 (508)
+=... . .+.++|..+ .++.+++.+.+.+..-. + . +. +.++++..+
T Consensus 252 AEHd~----~-a~~iLvT~s--~~la~~V~~~v~~ql~~-----------l-~---r~---~i~~~sl~~---------- 296 (426)
T PRK12447 252 AEHGP----N-SPAVLITTS--RKLAEEVLAEIERLLAI-----------L-P---TA---DVASAAWRD---------- 296 (426)
T ss_pred hccCC----C-CceEEEECC--HHHHHHHHHHHHHHHHh-----------C-C---HH---HHHHHHHHh----------
Confidence 43332 2 334555444 34444444443321100 0 0 00 112222211
Q ss_pred cCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEE
Q 010506 372 IESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVN 451 (508)
Q Consensus 372 ~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~ 451 (508)
+| .|+-++|++||++++|..-.= -..|.++|......-. -.+|.|+
T Consensus 297 --------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~~~~l~~i----~nAGaiF 342 (426)
T PRK12447 297 --------------------------YG---EVILCDDLEEMVAEADRYASE-HVQVMTEDPDWFLENM----TNYGALF 342 (426)
T ss_pred --------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCHHHHHhhc----Cccceec
Confidence 11 245679999999999987332 3457888876654433 4789999
Q ss_pred EcCCCC--CCCCC-CCccCCCCCCCCCcchHHHHHHhhheeEEEEeCC
Q 010506 452 VNIPTN--GAEIG-GAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 452 iN~~~~--~~~~~-~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
+...+. ..+.. -|--=...+|..|..+.-+...|+++.++ +.|+
T Consensus 343 lG~~sp~a~GDY~aGpNHvLPT~G~Ar~~sgLsv~~FlK~~s~-~~~s 389 (426)
T PRK12447 343 LGERTNVAYGDKVIGTNHVLPTSGAARYTGGLWVGKFLKTVTY-QRVT 389 (426)
T ss_pred cCCCCchhhhhcccCCCcccCCCcceeecCCCcHHHhccceeE-EEEC
Confidence 965432 11110 01111235567788888889999987655 3443
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.51 E-value=1.3 Score=45.84 Aligned_cols=269 Identities=16% Similarity=0.154 Sum_probs=147.2
Q ss_pred CCceeEEEEeecceEEEEeCC---CCchhhhHHHHHHHhhcCCE--EEeeCCCCC-hhHHHHHHHHHHHHHHhCCCCCCe
Q 010506 144 PNHMMLETWNPLGVVGVITAF---NFPCAVLGWNACIALVCGNC--VVWKGAPTT-PLITIAITKLVSEVFERNKLPGAI 217 (508)
Q Consensus 144 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~--VVlkps~~~-~~~~~~l~~~l~~~l~~aGlP~g~ 217 (508)
++......+.|+.-|++..|. -||-. ++....||-.+|.. |+.-|.... ......+ . +.+.+|+-+ +
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL----~-AA~~~Gv~e-I 182 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPST-ALMLAVPAQIAGCKTVVLATPPRKDGSICPEVL----Y-CAKKAGVTH-I 182 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccHH-HHHhhcchhhcCCCeEEEEECCCcCCCCCHHHH----H-HHHHcCCCe-e
Confidence 444556788999999999997 46644 44477899888874 455665321 1111111 1 245566543 2
Q ss_pred EEEecCChhhHHHHH----cCCCcCEEEEeCCHHHHHHHHHHhhhccCceeecc-CccC--eEEEcCCCCHHHHHHHHHH
Q 010506 218 FTSFCGGAEIGQAIA----KDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLEL-SGNN--AIIIMDDADIKLAVRSVLF 290 (508)
Q Consensus 218 ~~~v~g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~el-gG~~--~~iV~~daDl~~aa~~i~~ 290 (508)
+. -||.+.-.+|. .-|+||.|+=.|..=+...=....+. ..-+-..+ -|.+ -+|-+++||.+.++..++.
T Consensus 183 y~--vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G~-~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLa 259 (431)
T PLN02926 183 LK--AGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQNS-EAMVSIDMPAGPSEVLVIADKTANPVHVAADLLS 259 (431)
T ss_pred ec--cCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhCC-CCccccCCCCCCceeEEEeCCCCCHHHHHHHHHH
Confidence 22 25776666665 35689999877766543321111110 00022111 1333 3444456899998888876
Q ss_pred HHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCc
Q 010506 291 AAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGS 370 (508)
Q Consensus 291 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~ 370 (508)
-+=.... .+.++|..+ .++.+++.+.+.+..-. + . +. +.++.+...
T Consensus 260 QAEHdp~-----a~aiLvT~s--~~la~~V~~~v~~ql~~-----------l-~---r~---~i~~~sl~~--------- 305 (431)
T PLN02926 260 QAEHGPD-----SQVVLVAVG--DVDLDAIEEEVEKQCQS-----------L-P---RG---EIASKALGH--------- 305 (431)
T ss_pred HhccCCC-----CcEEEEECC--HHHHHHHHHHHHHHHHh-----------C-C---hH---HHHHHHHHC---------
Confidence 5443322 344555554 34444444443321100 0 0 00 111222111
Q ss_pred ccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEE
Q 010506 371 VIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIV 450 (508)
Q Consensus 371 ~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V 450 (508)
-.|+.++|++||++++|..-.= -..|.++|.+....-. -.+|.|
T Consensus 306 -------------------------------g~iivv~~l~ea~~~~N~~APE-HLei~~~~~~~~l~~i----~nAGai 349 (431)
T PLN02926 306 -------------------------------SFIVVARDMAEAISFSNLYAPE-HLIVNVEDAESWLDKI----DNAGSV 349 (431)
T ss_pred -------------------------------CEEEEECCHHHHHHHHHhhChH-hheehhcCHHHHHhhc----Ccccee
Confidence 1346779999999999986322 3457888876654433 478999
Q ss_pred EEcCCCC--CCCCCCCccC----CCCCCCCCcchHHHHHHhhheeEEEEeCC
Q 010506 451 NVNIPTN--GAEIGGAFGG----EKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 451 ~iN~~~~--~~~~~~pfGG----~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
++...+. ..+. +.| ...+|..|..|.-+...|+++.++ +.++
T Consensus 350 FlG~~sp~a~GDY---~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~-~~~s 397 (431)
T PLN02926 350 FLGRWTPESVGDY---ASGTNHVLPTYGYARMYGGVSLDSFLKYMTV-QSLT 397 (431)
T ss_pred ccCCCCchhhhcc---ccCcCcccCCCcceeecCCCcHHHhcceeeE-EEEC
Confidence 9965432 2111 112 134567788888889999997654 3443
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=1.7 Score=44.71 Aligned_cols=264 Identities=18% Similarity=0.238 Sum_probs=144.7
Q ss_pred CCceeEEEEeecceEEEEeCC---CCchhhhHHHHHHHhhcCCEE--EeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeE
Q 010506 144 PNHMMLETWNPLGVVGVITAF---NFPCAVLGWNACIALVCGNCV--VWKGAPTTPLITIAITKLVSEVFERNKLPGAIF 218 (508)
Q Consensus 144 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~V--Vlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~ 218 (508)
++.....++.|+--|++..|. -||-. ++....||-.+|..= +.-|..........+ -+...+|+-+ ++
T Consensus 100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL-----~Aa~~~Gv~e-Iy 172 (416)
T PRK13770 100 ESVECYEIYHPLESVGIYVPGGKASYPST-VLMTATLAQVAGVENIVVVTPPQPNGVSQEVL-----AACYITQVNQ-VF 172 (416)
T ss_pred CCcEEEEEEeeeeeeEEEccCCCCCccHH-HHHhhccHhhcCCCeEEEEeCcCCCCCCHHHH-----HHHHHcCCCe-ee
Confidence 344556688999999999996 36644 444778999999854 445554311111111 1235566533 22
Q ss_pred EEecCChhhHHHHH----cCCCcCEEEEeCCHHHHHHHHHHhhhccCceeecc-CccC--eEEEcCCCCHHHHHHHHHHH
Q 010506 219 TSFCGGAEIGQAIA----KDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLEL-SGNN--AIIIMDDADIKLAVRSVLFA 291 (508)
Q Consensus 219 ~~v~g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~el-gG~~--~~iV~~daDl~~aa~~i~~~ 291 (508)
. -||.+.-.+|. .-|.||.|+=.|..=+...=.... ..+-..+ -|.+ .+|-+++||.+..+..++.-
T Consensus 173 ~--iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~----g~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQ 246 (416)
T PRK13770 173 Q--VGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLF----GQVGIDQIAGPTEIALIIDETADLDAIVYDVFAQ 246 (416)
T ss_pred c--cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhc----CCcCcCCCCCCceeEEEecCCCCHHHHHHHHHHH
Confidence 2 25766666665 357899998777654332211111 1222111 1333 34555579999988888765
Q ss_pred HHhhcCCCcCCCceEEEecc--cHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCC
Q 010506 292 AVGTAGQRCTTCRRLLIHES--IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369 (508)
Q Consensus 292 ~~~~~Gq~C~a~~~v~V~~~--i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg 369 (508)
+=... . .+.++|..+ +.++..+++.+.+..+. . . +.++.+..+
T Consensus 247 AEHd~----~-a~~iLvT~s~~la~~V~~ev~~ql~~lp---------------r---~----~i~~~al~~-------- 291 (416)
T PRK13770 247 AEHDE----L-ARTYVISEDAQVLKDLESRIAKALPNVD---------------R---Y----DIVSKSIAN-------- 291 (416)
T ss_pred hccCC----C-CcEEEEeCCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHHHh--------
Confidence 43332 2 344555444 23444444444333321 0 0 112222211
Q ss_pred cccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeE
Q 010506 370 SVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGI 449 (508)
Q Consensus 370 ~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~ 449 (508)
+| .++-++|++||++++|..-.= -..|.++|.+....-. -.+|.
T Consensus 292 ----------------------------~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~~~~l~~i----~nAGa 335 (416)
T PRK13770 292 ----------------------------QH---YLIHASNFDEACHVMNTIAPE-HASIQTVNPQPYIEKV----KYVGA 335 (416)
T ss_pred ----------------------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCHHHHHhhC----CEece
Confidence 11 345679999999999987332 3457888886655443 47899
Q ss_pred EEEcCCCC--CCCCC-CCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 450 VNVNIPTN--GAEIG-GAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 450 V~iN~~~~--~~~~~-~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|++...+. ..+.. -|--=...+|..|..+.-+...|+++.++
T Consensus 336 iFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~ 380 (416)
T PRK13770 336 LFIGHYSPEVIGDYVAGPSHVLPTNRTARFTNGLSVNDFLTRNTV 380 (416)
T ss_pred eccCCCCchhhhccccCCCCcCCCCcceeccCCCcHHHeecceee
Confidence 99976443 11110 00001134567777777788999988665
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=1.8 Score=43.80 Aligned_cols=254 Identities=16% Similarity=0.124 Sum_probs=141.0
Q ss_pred CCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEE--EeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEe
Q 010506 144 PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCV--VWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSF 221 (508)
Q Consensus 144 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~V--Vlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v 221 (508)
++.....++.|+--|++..|.-||- +++....||-.+|..= +.-|... .....+ . ++..+|+-+ ++ -
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~TPp~~--i~p~vL----~-aa~~~Gv~e-Iy--~ 151 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVVTPPRG--VTGELL----A-VAKELGVKG-VL--A 151 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEeCCCCC--CCHHHH----H-HHHHcCCCe-ee--c
Confidence 4555567889999999999976664 4445778998888753 3445422 111111 1 245566543 21 1
Q ss_pred cCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcC
Q 010506 222 CGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCT 301 (508)
Q Consensus 222 ~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~ 301 (508)
-||.+.-.++....++|.|+=.|..=+...=....+. .-+=+-.|-.--+||-+++|.+.++..++.-+=... .
T Consensus 152 vGGAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~--V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~----~ 225 (368)
T PRK13769 152 IGGPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQY--VGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGP----T 225 (368)
T ss_pred ccCHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhCC--cCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCC----C
Confidence 3577766677766689999877776543321111111 111122233334555566898888877765443322 2
Q ss_pred CCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecc
Q 010506 302 TCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQP 381 (508)
Q Consensus 302 a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~P 381 (508)
.+.++|..+ .++.+++.+++.+. +... .
T Consensus 226 -a~~iLvT~s--~~la~~V~~~v~~~---------------------------~~~~--~-------------------- 253 (368)
T PRK13769 226 -SFAYLLSTD--AELLKAAEEIYRRE---------------------------RTSS--M-------------------- 253 (368)
T ss_pred -CcEEEEECC--HHHHHHHHHHHHHH---------------------------HHhc--C--------------------
Confidence 344555555 35555554443321 1000 0
Q ss_pred EEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCC
Q 010506 382 TIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEI 461 (508)
Q Consensus 382 tv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~ 461 (508)
|- -.|+.++|++||++++|..-.= -..|.+ ......++ -.+|.|+++.+....+.
T Consensus 254 -----------------~~-~~iivv~~leeai~~~N~~APE-HLel~~-~~~~~~~i-----~nAGsiFl~~p~a~GDY 308 (368)
T PRK13769 254 -----------------GP-LEVRKVAGVEEAVRFIDEIAPE-HLEVWG-RREVAYRV-----RNVGAVSVNMPSPYLDY 308 (368)
T ss_pred -----------------CC-CeEEEECCHHHHHHHHHhhChH-heEeeC-cHHHHhhC-----CccCChhcCCchhhhcc
Confidence 00 2467789999999999987322 123334 33334333 36899999665433221
Q ss_pred CC-CccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 462 GG-AFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 462 ~~-pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
.. |--=...+|..|+.|.-+...|+++.++
T Consensus 309 ~aGpNHvLPT~G~AR~~sgLsv~~FlK~~t~ 339 (368)
T PRK13769 309 VAGISHVLPTGGTARWRGIITPLTFMKPIGV 339 (368)
T ss_pred ccCCCCcCCCCcceeccCCCcHHHcccceeE
Confidence 10 1101134567777777788899887655
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.035 Score=65.30 Aligned_cols=103 Identities=17% Similarity=0.102 Sum_probs=74.2
Q ss_pred CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEec
Q 010506 143 RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFC 222 (508)
Q Consensus 143 ~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~ 222 (508)
..+..+.....|+|+|+++.+-.- ..+.+++.+|++||.||+..++.. .. ++ +++|+.+.+.+.
T Consensus 1176 PTGE~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~~---~~--------~~--~~Lp~~v~~~v~ 1239 (1318)
T PRK11809 1176 PTGERNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDALH---RA--------LV--AALPAAVQARIQ 1239 (1318)
T ss_pred CCCCcceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCchh---HH--------HH--HhccHHHHhHhh
Confidence 345555667789999999987332 467789999999999988654431 11 12 568888777652
Q ss_pred CChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCcee
Q 010506 223 GGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCL 264 (508)
Q Consensus 223 g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~ 264 (508)
-. .........++.|.|.|.....+.+.++.+++.++++
T Consensus 1240 ~~---~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809 1240 LA---KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred hc---cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence 21 1222234679999999999999999999998888776
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 508 | ||||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 1e-162 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 1e-154 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 5e-48 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-47 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 1e-47 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-47 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 3e-47 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 3e-47 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 8e-47 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 3e-46 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 3e-45 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 4e-45 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 8e-45 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 9e-44 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-43 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 2e-43 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 5e-43 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-42 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-42 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-42 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 2e-41 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 6e-41 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 2e-40 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 4e-40 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 5e-40 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 5e-40 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 6e-40 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 6e-40 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 6e-40 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 1e-39 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 1e-39 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 2e-39 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 2e-39 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 3e-39 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 3e-39 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 4e-39 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 5e-39 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 5e-39 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 5e-39 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 7e-39 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 8e-39 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 1e-38 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 1e-38 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 2e-38 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-38 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 3e-38 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 5e-38 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 6e-38 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 7e-38 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 1e-37 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 2e-37 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 3e-37 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 4e-37 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 5e-37 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 5e-37 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 6e-37 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 2e-35 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 6e-35 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 1e-34 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 3e-34 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 3e-34 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 7e-34 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 7e-34 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 8e-34 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 3e-33 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 4e-33 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 4e-33 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 8e-33 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 2e-32 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-32 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 4e-32 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 6e-32 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 3e-31 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 9e-31 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 4e-30 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 1e-28 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 3e-25 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-24 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-24 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-24 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 7e-24 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 4e-16 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 6e-15 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-13 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 3e-12 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 1e-09 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 1e-09 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 1e-09 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 3e-09 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 2e-08 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 2e-07 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 2e-06 |
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 508 | |||
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 0.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 1e-143 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 1e-140 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 1e-139 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 1e-132 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 1e-132 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 1e-123 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 1e-122 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 1e-120 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 1e-115 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 1e-115 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 1e-113 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 1e-106 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 1e-106 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 1e-105 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 1e-104 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 1e-104 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 1e-103 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 1e-102 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 1e-101 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 1e-100 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 1e-99 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 2e-99 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 3e-98 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 2e-97 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 2e-97 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 2e-97 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 2e-97 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 3e-97 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 7e-95 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 2e-94 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 1e-92 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 1e-92 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 3e-91 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 4e-91 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 4e-91 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 6e-91 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 8e-91 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 7e-86 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 4e-84 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 7e-84 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 2e-79 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 1e-74 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 4e-73 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 3e-34 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 8e-33 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-08 |
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 774 bits (2000), Expect = 0.0
Identities = 293/496 (59%), Positives = 370/496 (74%), Gaps = 2/496 (0%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
+ + +Y +L E+GL E G NG W G +++ P NN+ IA V +AS+ DYEE
Sbjct: 5 LLINQPQYAWLKELGLREENEG-VYNGSWGGRGEVITTYCPANNEPIARVRQASVADYEE 63
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
+K EA KIW ++PAPKRGE+VRQIGDALREK+ LG L+S+EMGKIL EG+GEVQE
Sbjct: 64 TVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEY 123
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
+D+CD+AVGLSR + G ++PSER H ++E WNP+G+VG+ITAFNFP AV GWN IA++
Sbjct: 124 VDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMI 183
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGN +WKGAPTT LI++A+TK++++V E NKLPGAI + CGGA+IG A+AKD R++L+
Sbjct: 184 CGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLL 243
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGST+VG V V +RFG+ LLEL GNNAII +DAD+ L V S LFAAVGTAGQRC
Sbjct: 244 SFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRC 303
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TT RRL IHESI+ V+++L Y Q+++G+P + L GPLHT ++ F +E K
Sbjct: 304 TTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKK 363
Query: 361 QGGKILTGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS 419
+GG ++ GG V++ GN+V+PTIV + A I E FAP+LYV KFQ EE NN
Sbjct: 364 EGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNE 423
Query: 420 VPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGS 479
V QGLSSSIFT+ IF+WLGP GSD GIVNVNIPT+GAEIGGAFGGEK TGGGRE+GS
Sbjct: 424 VKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGS 483
Query: 480 DSWKQYMRRSTCTINY 495
D+WKQYMRRSTCTINY
Sbjct: 484 DAWKQYMRRSTCTINY 499
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 422 bits (1087), Expect = e-143
Identities = 137/500 (27%), Positives = 242/500 (48%), Gaps = 28/500 (5%)
Query: 23 CFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+NG+ + S NP +Q + +V +A+ + E+ +++ EA + W + +R
Sbjct: 40 LIINGERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERA 99
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
++ + +R + H L E GK E + E ID ++ +LN
Sbjct: 100 NILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEIL 159
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
RP + P+GV I+ +NF A++ A +V GN VV K A TTP++
Sbjct: 160 SRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFV 219
Query: 202 KLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255
+++ + V N +PG+ GAE+G + P+ SL++FTGS VG+ + +
Sbjct: 220 EVLEDAGLPKGVI--NYVPGS-------GAEVGDYLVDHPKTSLITFTGSKDVGVRLYER 270
Query: 256 VHQRFG------KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
+ ++E+ G + +++ DAD+ LA S+L +A G +GQ+C+ R +IH
Sbjct: 271 AAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIH 330
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369
+ +Y VL++ V + K + +GDP + +GP+ ++ + IE K + G+++TGG
Sbjct: 331 KDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKE-GRLMTGG 389
Query: 370 SVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
S G F+QPTI+ + P A I++EE+F PV+ K F+ A++I N+ GL+ ++
Sbjct: 390 EGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAV 449
Query: 429 FTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGA-FGGEKATG-GGREAGSDSWKQYM 486
TR+ +I + G + N GA +G FGG K +G + G D +M
Sbjct: 450 ITRNRAHIEQAK--REFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHM 507
Query: 487 RRSTCTINYGNELPLAQGIN 506
+ T + Y L +
Sbjct: 508 QAKTVSEMYAENLYFQSHHH 527
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 413 bits (1065), Expect = e-140
Identities = 131/489 (26%), Positives = 232/489 (47%), Gaps = 30/489 (6%)
Query: 24 FVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
++ G+W + S+NP ++ + T +A + E ++A +A K W + P R
Sbjct: 41 YIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSR 100
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS- 141
++ + +R + L L E+GK E +V E ID ++ + + +
Sbjct: 101 LLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVV 160
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
P + PLG VI +NFP A+ + GN V+ K A ++ +
Sbjct: 161 PYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVF 220
Query: 202 KLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255
++ E V N LPG G E+G + + PRI ++FTGS +VGL + +
Sbjct: 221 EIFHEAGFPPGVV--NFLPGV-------GEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271
Query: 256 VHQRFG------KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
+ + +E G NAII+ + AD LA V+ +A G GQ+C+ RL++
Sbjct: 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILT 331
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369
+ Y+ VL++++ +++ +G P E+ LGP+ + E + IE K++ G+++ GG
Sbjct: 332 QGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNE-GQLVLGG 389
Query: 370 SVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
+E EG F+ PT+ E+ P A I +EE+F PVL V++ + F EA+++ N P GL+ +
Sbjct: 390 KRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGV 449
Query: 429 FTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGA-FGGEKATGGGREAGS-DSWKQYM 486
++R E++ G + N GA +G FGG K +G + G+ D + ++
Sbjct: 450 YSRKREHLEWAR--REFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFL 507
Query: 487 RRSTCTINY 495
+
Sbjct: 508 EMKAVAERF 516
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 425 bits (1095), Expect = e-139
Identities = 145/493 (29%), Positives = 237/493 (48%), Gaps = 28/493 (5%)
Query: 18 PETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELP 76
+T F+NGK + ++NP ++ + + +A + + + A A W +
Sbjct: 529 GKTYPLFINGKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTD 588
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136
R E + + A R++L L +E+GK + +V E ID ++ +L
Sbjct: 589 PRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQ 648
Query: 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
P + + P GV VI +NFP A+ A A+V GNCVV+K + T +I
Sbjct: 649 PQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSII 708
Query: 197 TIAITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGL 250
+ +L E VF N PG G+ +G + P ISL++FTGS + GL
Sbjct: 709 GWHLVELFREAGLPEGVF--NFTPGR-------GSVMGDYLVDHPDISLIAFTGSMETGL 759
Query: 251 MVQQTVHQRFG------KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCR 304
+ + + K + E+ G NAIII DDAD+ AV VL++A G GQ+C+ C
Sbjct: 760 RIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACS 819
Query: 305 RLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGK 364
R+++ +++Y +++LV + K K+G + +G + ++ K+ ++ E K + G
Sbjct: 820 RVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKRE-GH 878
Query: 365 ILTGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQG 423
+L V EG FV TI+ I P I +EE+F PVL VM+ + F++A++ NS
Sbjct: 879 VLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFA 938
Query: 424 LSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGA-FGGEKATGGGREAGS-DS 481
L+ IF+RSPE++ K G + +N GA + FGG + +G G +AG D
Sbjct: 939 LTGGIFSRSPEHLAKAR--REFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDY 996
Query: 482 WKQYMRRSTCTIN 494
+M T N
Sbjct: 997 LLHFMDPRVVTEN 1009
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 392 bits (1009), Expect = e-132
Identities = 126/460 (27%), Positives = 219/460 (47%), Gaps = 11/460 (2%)
Query: 23 CFVNGKW-KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++ G+W G T+ S++PV + + A + + A EA W P +R
Sbjct: 8 HYIAGQWLAGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRI 67
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
E++ + L+ + L R++ E GK L E EV +++ +V R+ G
Sbjct: 68 ELLERFAATLKSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGP 127
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
+L P GVV V +NFP + + AL+ GNCVV+K + TP +
Sbjct: 128 LADATAVL-RHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTL 186
Query: 202 KLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261
K + + LP + GG E G A+A + + FTGS++ G ++ +
Sbjct: 187 KA----WIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQ 242
Query: 262 KCL-LELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ-TVLDQ 319
K L LE+ GNN +++ + AD+ AV +++ +A +AGQRCT RRLL+ + + +L +
Sbjct: 243 KILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLAR 302
Query: 320 LVDVYKQVKIGDPLEK-GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNF 378
LV V +++G E+ +G + + + ++ K E++ +G + L +
Sbjct: 303 LVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAAL 362
Query: 379 VQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
+ P I+++S A+ EE F P+L V+++ F A++ N+ GL++ + + S E +
Sbjct: 363 LTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQ 422
Query: 439 WLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAG 478
+L S GIVN N GA FGG A+G R +
Sbjct: 423 FL--VESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSA 460
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 392 bits (1009), Expect = e-132
Identities = 124/481 (25%), Positives = 219/481 (45%), Gaps = 14/481 (2%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
+ G+W ++INP ++ IA +AS+ D + +A +A W PA +
Sbjct: 14 KHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAE 73
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R ++ + + L E + L E G + E+ ++ + +++G +
Sbjct: 74 RSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGRIS 133
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
PS P GVVGVI+ +NFP + + AL GN VV K A TP+
Sbjct: 134 PSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGV 193
Query: 200 ITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG--LMVQQTV 256
+ + +FE +P + ++ G G+EIG L+SFTGST VG +
Sbjct: 194 ---IPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAIN 250
Query: 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
LEL GN +++ DADI A ++ A GQ C + R+++ +++
Sbjct: 251 GGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEF 310
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
L++ V+ K + GDP +GTL+GP+ ++ IE K +G + G EG
Sbjct: 311 LEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEG---PIEG 367
Query: 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435
V P + +++ +I +EE+F P++ V+K A ++ N+ GLS++++++ +
Sbjct: 368 RLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDR 427
Query: 436 IFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495
++ D+G+V++N T E FGG K +G GR G + +++ I
Sbjct: 428 AAQF--ALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKR 485
Query: 496 G 496
Sbjct: 486 S 486
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 367 bits (945), Expect = e-123
Identities = 117/482 (24%), Positives = 222/482 (46%), Gaps = 23/482 (4%)
Query: 23 CFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
+VNG+WK + P + ++ +V S E+ + + +A W L +R
Sbjct: 7 NYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAA 66
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP-- 140
+ ++ D L +G +LS E+ K + EV ++ ++A ++ G V+
Sbjct: 67 YLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGG 126
Query: 141 ---SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197
+ + + P+G+V I+ FN+P + G AL+ GN + +K +
Sbjct: 127 SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISG 186
Query: 198 IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG--LMVQQ 254
+ + + F LP +F + G G+EIG I + ++ ++FTGST +G +
Sbjct: 187 LLLAEA----FAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA 242
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ +LEL G ++ I+++DAD++L ++++ A G +GQRCT +R+L+ ES+
Sbjct: 243 GMR----PIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD 298
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
+++++ + + IG+P + + PL +S E I + +G LT +
Sbjct: 299 ELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEI---KR 354
Query: 375 EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
EGN + P + +++ + EE F PVL +++ + EEA++I+N GL +SIFT
Sbjct: 355 EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDF 414
Query: 434 ENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493
F + G V++N T F G K +G G + S + +
Sbjct: 415 PRAFG--IAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
Query: 494 NY 495
+
Sbjct: 473 DI 474
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 366 bits (942), Expect = e-122
Identities = 124/489 (25%), Positives = 220/489 (44%), Gaps = 25/489 (5%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
NG+W G +S P + + ++ S E+ + ++ +A KIW P +
Sbjct: 13 NILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHE 72
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R +++ D L E+ +G L+ E+ K IGEV D+ + +LNG +
Sbjct: 73 RVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETL 132
Query: 140 PSER-----PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTP 194
++ + L PLGVV I+ FN+P + ALV GN VV+K A
Sbjct: 133 KGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGS 192
Query: 195 LITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG--LM 251
L I + + P I G G+ IG + + P I +++FTG T G +
Sbjct: 193 LSGIKMVEA----LADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERIS 248
Query: 252 VQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHES 311
+ + +LEL G + I++DDAD+KL ++ A +GQRCT +R+ + +S
Sbjct: 249 EKAKMI----PVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDS 304
Query: 312 IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV 371
+ ++ + ++ +Q+ +G P + + P+ +S + I++ G +L+G
Sbjct: 305 VADQLVANIKELVEQLTVGSPED-DADITPVIDEKSAAFIQGLIDDALENGATLLSGN-- 361
Query: 372 IESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+ +GN + PT++ +++P + EE F PVL +++ + EA+ ++N GL +SIFT
Sbjct: 362 -KRQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFT 420
Query: 431 RSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490
+ + + G V++N T F G K +G G + S R
Sbjct: 421 KDTDRAIN--IGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERV 478
Query: 491 CTINYGNEL 499
+N L
Sbjct: 479 TVLNLAENL 487
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 375 bits (964), Expect = e-120
Identities = 125/471 (26%), Positives = 203/471 (43%), Gaps = 23/471 (4%)
Query: 44 NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLS 103
+ + +A+ + + A W PA R + Q L + H LL
Sbjct: 538 TGDLKPIADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQ 597
Query: 104 IEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPN-HMMLETWNPLGVVGVIT 162
E GK L + + E++E D C + R+L GS P T GV I+
Sbjct: 598 REGGKTLDDALSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAIS 657
Query: 163 AFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFC 222
+NFP A+ AL+ GN VV K A TP I L +P +
Sbjct: 658 PWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVAL----LHEAGIPKSALYLVT 713
Query: 223 GGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG---KCLLELSGNNAIIIMDDA 279
G IG A+ P I+ V FTGST+V + + + + G + E G NA+I A
Sbjct: 714 GDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATA 773
Query: 280 DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLL 339
+ V+ +A +AGQRC+ R L + E + +++ + +++KIGDP + T +
Sbjct: 774 LPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHV 833
Query: 340 GPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFA 399
GP+ E+++ + I +K++ ++ G EG FV P I E+ A + EE+F
Sbjct: 834 GPVIDVEAKQRLDAHIARMKTE-ARLHFAGPA--PEGCFVAPHIFEL-TEAGQLTEEVFG 889
Query: 400 PVLYVMKFQ--TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTN 457
P+L+V++++ E ++ GL+ + +R ++I + G + VN
Sbjct: 890 PILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAII--DRVQVGNIYVNRNMI 947
Query: 458 GAEIGGA-FGGEKATG-GGREAGSDSWKQYMRRSTCTINYGNELPLAQGIN 506
GA +G FGG +G G + G ++ T TIN A G N
Sbjct: 948 GAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINTA-----AAGGN 993
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 348 bits (895), Expect = e-115
Identities = 137/479 (28%), Positives = 235/479 (49%), Gaps = 16/479 (3%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
F++GKW + INP + + I + S E+ +E + + ++ LP KR +
Sbjct: 3 FIDGKWIN-REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNI 61
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER 143
+ I ++EK L ++L+I+ GK + + EV+ I A ++ VIPS
Sbjct: 62 LMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS-- 119
Query: 144 PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKL 203
+ ++ P+G+VG IT FNFP + A+ GN +V + PL+ I + K+
Sbjct: 120 DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKI 179
Query: 204 VSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG--LMVQQTVHQRF 260
+ ++ +P ++ G G +G I + +++++SFTGS+KVG + +
Sbjct: 180 IENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAGFK--- 236
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
K LEL G N I++ DAD+ AV +++ + AGQ C + +L+ ESI ++
Sbjct: 237 -KIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMF 295
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQ 380
V+ K + +G+PL++ T +GPL + E + EK +E +GGK+L GG + +
Sbjct: 296 VNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGG---KRDKALFY 352
Query: 381 PTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440
PTI+E+ + K E FAPV+ +++ EE + I NS GL S+IFT K+
Sbjct: 353 PTILEVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKF- 410
Query: 441 GPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGNEL 499
+ G V +N + + FGG K +G GRE + ++ T I+ L
Sbjct: 411 -AENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAENL 468
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 348 bits (894), Expect = e-115
Identities = 122/487 (25%), Positives = 212/487 (43%), Gaps = 23/487 (4%)
Query: 23 CFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWM-ELPAPKRG 81
++ G+W G + +P++ IA V+ S E+ E + + + ++P +R
Sbjct: 21 SYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERL 80
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
V+R+ D + L +L + GK +GEV+ +D A +++ G IP
Sbjct: 81 AVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPG 140
Query: 142 ERP----NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197
+ L PLGVV IT FN+P + + GN VV K + + PL
Sbjct: 141 DWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPA 200
Query: 198 IAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG--LMVQQT 255
K P + + I D R++ VSFTGST+VG ++
Sbjct: 201 AMAVKA----LLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG 256
Query: 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
V + ++EL G + I+++DAD+ LA + AGQRC + +L +Y
Sbjct: 257 VK----QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGK 312
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375
+++++ +++GDP + +GPL +P + IE+ +GG++L GG +
Sbjct: 313 LVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRL--G 370
Query: 376 GNFVQPTIVE----ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+VQPT VE + K E+FAPV ++ + ++A+++ N P GL +++F R
Sbjct: 371 PTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGR 430
Query: 432 SPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491
I + + G + +N FGG K +G RE + + T
Sbjct: 431 DVVKIRR--AVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTI 488
Query: 492 TINYGNE 498
NY +
Sbjct: 489 VFNYKGK 495
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 342 bits (880), Expect = e-113
Identities = 129/469 (27%), Positives = 218/469 (46%), Gaps = 13/469 (2%)
Query: 23 CFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
F+NGKW G T +NP + I T A+ + E+ +A K W + R
Sbjct: 9 SFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDR 68
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGS-VI 139
V+++ L E + +++ E G + + E+++ I + D A+ + +L G +
Sbjct: 69 KAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEV 128
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
PS+ PLGV+ I+ FNFP + + A+ GN VV K T +
Sbjct: 129 PSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGT 188
Query: 200 ITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
++++ FE LP + EIG + +P L+SFTGST VG + + +
Sbjct: 189 ---IIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGR 245
Query: 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318
F + LEL GNN ++ DAD+ AV + +F GQ C R+++H+ +Y ++
Sbjct: 246 AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVE 305
Query: 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNF 378
+ KQ+ GD + T++GPL + + IE K+ G ++ G + GN
Sbjct: 306 KFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEG---KRVGNV 362
Query: 379 VQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIF 437
+ P + + I + ELFAP+ ++K + +EA+ + N GLSS++FT E
Sbjct: 363 LTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGE 422
Query: 438 KWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
K+ D+G+ +VN + AFGG KA+G GR +++
Sbjct: 423 KF--ALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFT 469
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 325 bits (835), Expect = e-106
Identities = 129/482 (26%), Positives = 206/482 (42%), Gaps = 19/482 (3%)
Query: 22 GCFVNGKW-KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
+NG+ G NP + + EAS E + ++A A W + R
Sbjct: 25 KLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVR 84
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVI 139
E + ++ D + E L S GK L E+ ++D+ F G +R LNG
Sbjct: 85 AECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAA 144
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
H + +PLGVV I +N+P + W AL GNCVV K + TPL +
Sbjct: 145 GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 204
Query: 200 ITKLVSEVFER---NKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
+ +L ++F N L G G +G + P++ +VS TGS G +
Sbjct: 205 LAELAKDIFPAGVVNILFGR-------GKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT 257
Query: 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ +EL G +I+ DDADI+ V V AGQ CT R+ + IY T+
Sbjct: 258 ASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTL 317
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESE 375
+++L +K G P ++ T LGPL + + K +E K+ G K++TGG +
Sbjct: 318 VEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGN 377
Query: 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
G + PT++ IV++E+F PV+ V F E+ V N GL+SS++T+
Sbjct: 378 GYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTK--- 434
Query: 435 NIFKWLG-PHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493
++ + G VN GG+K +G G++ + Y +
Sbjct: 435 DVGRAHRVSARLQYGCTWVNTH-FMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMV 493
Query: 494 NY 495
+
Sbjct: 494 KH 495
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 325 bits (836), Expect = e-106
Identities = 148/501 (29%), Positives = 238/501 (47%), Gaps = 27/501 (5%)
Query: 15 GLSPETPGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SK 70
L + +++G+W A+ T INP N + I TV E + ED E + A A S
Sbjct: 27 LLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG 86
Query: 71 IWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGL 130
W + A RG+ VR I D ++E L RL +++ GK L E ++ ++ ++ + GL
Sbjct: 87 EWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGL 146
Query: 131 SRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 190
+ + G +I S P+ P+GVV IT +N+P W AL G +V K +
Sbjct: 147 ADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPS 206
Query: 191 PTTPLITIAITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTG 244
TPL TI + +L+ E N + GA G+E+G ++ + LVSFTG
Sbjct: 207 EITPLTTIRVFELMEEVGFPKGTI--NLILGA-------GSEVGDVMSGHKEVDLVSFTG 257
Query: 245 STKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCR 304
+ G + + LEL G N II DDAD +LAV L AGQ C+
Sbjct: 258 GIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGS 317
Query: 305 RLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGK 364
R+L+ SI L+D K++K+G+ + T +GP+ + E R E ++ K++G
Sbjct: 318 RILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGAT 377
Query: 365 ILTGGSVIESE----GNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS 419
I GG + + G F +PT+ + IV+EE+F PV+ V F+T +EA+++ N
Sbjct: 378 IAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLAND 437
Query: 420 VPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGS 479
GL+ ++F++ + + G V +N + +GG K +G GRE G
Sbjct: 438 SIYGLAGAVFSKDIGKAQRV--ANKLKLGTVWINDF-HPYFAQAPWGGYKQSGIGRELGK 494
Query: 480 DSWKQYMRRSTCTINYGNELP 500
+ ++Y+ N +L
Sbjct: 495 EGLEEYLVSKHILTNTNPQLV 515
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 321 bits (826), Expect = e-105
Identities = 119/483 (24%), Positives = 203/483 (42%), Gaps = 19/483 (3%)
Query: 22 GCFVNGKW-KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
+ ++ +NP I + EAS + + A A W + +R
Sbjct: 27 QLLIGSRFEAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAER 86
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVI 139
+ +I DA+ ++ L ++ GK + E+ +ID F G R L+
Sbjct: 87 SNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAA 146
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
P H + +P+G+VG I +N+P ++ W A+ GN VV+K + TPL +
Sbjct: 147 GEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALK 206
Query: 200 ITKLVSEVFER---NKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
+ +L++++ N + G G +G A+ P++ +VS TG G V
Sbjct: 207 LARLIADILPEGVVNVITGR-------GETVGNALINHPKVGMVSITGDIATGKKVLAAA 259
Query: 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ + LEL G +I+ DAD++ V + AGQ CT R+ IY+ +
Sbjct: 260 AKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKL 319
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESE 375
+ L ++ + +GPL + R +E Q +I TGG E
Sbjct: 320 VADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDE 379
Query: 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
G F QPT+V + +IV+ E+F PV+ V +F ++AV N GL+SS++T+
Sbjct: 380 GFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTK--- 436
Query: 435 NIFKWLG-PHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493
+I K + G +N GG K +G G++ + + Y I
Sbjct: 437 DISKAMRAASRLQYGCTWINTH-FMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMI 495
Query: 494 NYG 496
N+G
Sbjct: 496 NHG 498
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 321 bits (826), Expect = e-104
Identities = 136/493 (27%), Positives = 233/493 (47%), Gaps = 27/493 (5%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNN-QKIATVVEASLEDYEEGMKACSEA--SKIWMELP 76
V+GK A G T+ ++P + + + T EAS +D + + A +A + W +
Sbjct: 24 QMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMS 83
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136
+R ++ ++ D + + L + S+E+GK + + GE+ D+ +A G +R L G
Sbjct: 84 GAERSRLMFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEG 143
Query: 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
+ + + L P+GVVG+IT +NFP + A+ G VV K + T
Sbjct: 144 QTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGT 203
Query: 197 TIAITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGL 250
+I + +L E VF N + G G GQ +A+DP + +V+FTGS +VG
Sbjct: 204 SIRLAELAREAGIPDGVF--NVVTGY-------GDPAGQVLAEDPNVDMVAFTGSVRVGT 254
Query: 251 MVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHE 310
+ + + + LEL G I+ DAD+ A + + AGQ C + RLL+ E
Sbjct: 255 KLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQE 314
Query: 311 SIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGS 370
I ++++L+D+ ++V GDPL + T +G + + + + + G ++L GG
Sbjct: 315 GIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGE 374
Query: 371 VIESE-GNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
I E G + PT+ ++P I +EE+F PVL + F+T +EAV + N+ GLS+S+
Sbjct: 375 RIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASV 434
Query: 429 FTRSPENIFKWLG-PHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487
++ N+ L G +N GG K +G GRE G + +Y +
Sbjct: 435 WST---NLETALQTIRRIRAGRCWINS-VIDGTPELPIGGYKKSGLGRELGRYGFDEYSQ 490
Query: 488 RSTCTINYGNELP 500
+ G P
Sbjct: 491 FKGVHVTLGRPAP 503
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 319 bits (820), Expect = e-104
Identities = 133/468 (28%), Positives = 225/468 (48%), Gaps = 24/468 (5%)
Query: 22 GCFVNGKWKAH--GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
+++G++ + +NP I+ + + ED + + A A W LPA +
Sbjct: 8 PMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIE 67
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R +R+I +RE+ + L+ E GKI EV D D+ +R+ G +I
Sbjct: 68 RASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEII 127
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
S+RP +L LGV I +NFP ++ AL+ GN +V K + TP IA
Sbjct: 128 QSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIA 187
Query: 200 ITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG--LMVQ--Q 254
K+V + LP +F G G +GQ +A +P++++VS TGS G +M +
Sbjct: 188 FAKIV----DEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ K LEL G I+MDDAD++LAV++++ + V +GQ C R+ + + IY
Sbjct: 244 NIT----KVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYD 299
Query: 315 TVLDQLVDVYKQVKIGDPLEKG-TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
+++L + + V+ G+P E+ +GPL + + E+ + +G ++ GG +E
Sbjct: 300 QFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVE 359
Query: 374 SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
+G + PT++ ++ I+ EE F PVL V+ F T E+A+ + N GL+SSI+T++
Sbjct: 360 GKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419
Query: 433 PENIFKWLGPHGSDTGIVNVN--IPTNGAEIGGAFGGEKATGGGREAG 478
K + G G +N G G + +G G G
Sbjct: 420 LNVAMKAI--KGLKFGETYINRENFEAMQ---GFHAGWRKSGIGGADG 462
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 317 bits (815), Expect = e-103
Identities = 145/499 (29%), Positives = 218/499 (43%), Gaps = 31/499 (6%)
Query: 19 ETPGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-----SKI 71
T F+NG WK + INP I + A+ ED + + A A
Sbjct: 6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGAD 65
Query: 72 WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLS 131
W R +R I + EK L +L SI+ GK L E ++ +V ++ L+
Sbjct: 66 WATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLA 125
Query: 132 RQLNGSV---IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 188
+L+ + P+GVVG+IT +N+P + W AL G + K
Sbjct: 126 EKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILK 185
Query: 189 GAPTTPLITIAITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSF 242
+ L + + ++ E V N L G G E G +A P + V+F
Sbjct: 186 PSELASLTCLELGEICKEVGLPPGVL--NILTGL-------GPEAGAPLATHPDVDKVAF 236
Query: 243 TGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTT 302
TGS+ G + Q LEL G + +++ +D D+ A +F T GQ C+
Sbjct: 237 TGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSA 296
Query: 303 CRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG 362
RL++HESI L+++V K +KI DPLE+G LGP+ + + K + N KS+G
Sbjct: 297 TSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEG 356
Query: 363 GKILTGGSVIE--SEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS 419
ILTGGS E +G F++PTI +++ I +EE+F PVL V F T EEA+ + N
Sbjct: 357 ATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLAND 416
Query: 420 VPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGS 479
GL +++ + E + GIV VN +GG K +G GRE G
Sbjct: 417 TVYGLGAAVISNDLERCERV--TKAFKAGIVWVNCS-QPCFTQAPWGGVKRSGFGRELGE 473
Query: 480 DSWKQYMRRSTCTINYGNE 498
Y+ T E
Sbjct: 474 WGLDNYLSVKQVTQYISEE 492
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 316 bits (811), Expect = e-102
Identities = 128/490 (26%), Positives = 215/490 (43%), Gaps = 20/490 (4%)
Query: 19 ETPGCFVNGKWK--AHGPTVSS-INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMEL 75
+ G+ G T P + + +V E+ ++ +++ A W ++
Sbjct: 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKM 77
Query: 76 PAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN 135
+R V+ + +RE+ ++ +L I GK + E ++ ++ GL+ L+
Sbjct: 78 AGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLS 137
Query: 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195
G I PLGV I A+N+P + W AL CGN VV+K +P TP+
Sbjct: 138 GQHIQL-PGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPV 196
Query: 196 ITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255
+ + ++ E +P + GGAE G + P ++ VSFTGS G V +
Sbjct: 197 TGVILAEIFHEA----GVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEM 252
Query: 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
+ LEL G + ++I D +++ AVR L A T GQ CT R+ + I
Sbjct: 253 SAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQ 312
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375
L+++V K + +GDPL T +G L + + K +G ++L GG +
Sbjct: 313 FLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPS 372
Query: 376 ------GNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
G F+ P + VKEE+F PV+ V+ F T EE ++ N+ GL+S +
Sbjct: 373 DPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGV 432
Query: 429 FTRSPENIFKWLG-PHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487
FTR +I + + G +N + + + FGG K +G GRE G + Y +
Sbjct: 433 FTR---DISRAHRVAANLEAGTCYINTY-SISPVEVPFGGYKMSGFGRENGQATVDYYSQ 488
Query: 488 RSTCTINYGN 497
T + G+
Sbjct: 489 LKTVIVEMGD 498
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 314 bits (807), Expect = e-101
Identities = 105/519 (20%), Positives = 180/519 (34%), Gaps = 47/519 (9%)
Query: 18 PETPGCFVNGKW-KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELP 76
E V G+W G ++ +PV + V L+ A + L
Sbjct: 5 TELLKNHVAGQWIAGTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALT 64
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136
+R + I L+ K + + G + ++ I + L L
Sbjct: 65 YAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGE 124
Query: 137 SVIPSERPNHMMLETWN---------PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVW 187
+ + + + GV I AFNFP L A AL+ G V+
Sbjct: 125 VHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIV 184
Query: 188 KGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTK 247
K A T +T +V++V + LP + CG + + + +VSFTGS
Sbjct: 185 KPATATAWLTQR---MVADVVDAGILPPGALSIICGSS--AGLLDQIRSFDVVSFTGSAD 239
Query: 248 VG--LMVQQTVHQRFGKCLLELSGNNAIIIMDDADIK-----LAVRSVLFAAVGTAGQRC 300
L QR + ++ N+ I+ DA L ++ V+ +GQ+C
Sbjct: 240 TAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKC 299
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
T RR + E+ + VL+ L ++ +G+P +G L + E +N GI ++
Sbjct: 300 TAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALRE 359
Query: 361 QGGKILTGGSVIESE-----GNFVQPTIVEIS-PTAD--IVKEELFAPVLYVMKFQTF-- 410
+ +V + V P + ++ P + E+F PV V ++
Sbjct: 360 EAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTD 419
Query: 411 ------EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGA 464
AV + L +SI++ ++ + G V+ P+ G
Sbjct: 420 TNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGH 479
Query: 465 --------FGGEKATGGGRE-AGSDSWKQYMRRSTCTIN 494
GG GGG E G + Y RRS
Sbjct: 480 GNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 310 bits (797), Expect = e-100
Identities = 126/493 (25%), Positives = 220/493 (44%), Gaps = 30/493 (6%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
F+ G++ G T S++P N+ + + + KA EA + W A +
Sbjct: 28 LHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKE 87
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLS-RQLNGSV 138
R + +I + + + L + ++ G++L +V + F + +
Sbjct: 88 RKRYLLRIAELIEKHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRT 147
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
P + + + P G VG+IT +N P + W AL GN VV K A +P
Sbjct: 148 FPVD-RDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT 206
Query: 199 AITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMV 252
+ +++ E VF N + G G E G A+ P + L++ TG T+ G +V
Sbjct: 207 KLAEILKEADLPPGVF--NLVQGF-------GEEAGAALVAHPLVPLLTLTGETETGKIV 257
Query: 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESI 312
+ + EL G + ++ DAD++ A+ +V+F G+RCT RLL+ E I
Sbjct: 258 MRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKI 317
Query: 313 YQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI 372
++ + ++V+ + +++G PL+ T +GPL PE + +E K +G ++L GG
Sbjct: 318 FEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERA 377
Query: 373 E--------SEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGL 424
+ S GN++ PT+ I +EE+F PVL + F+ EEA++ N GL
Sbjct: 378 KTSFRGEDLSRGNYLLPTVFVGENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGL 437
Query: 425 SSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQ 484
++ +FTR E + + G+V +N N + FGG K +G RE G+ +
Sbjct: 438 AAYVFTRDLERAHRL--ALELEAGMVYLNSH-NVRHLPTPFGGVKGSGDRREGGTYALDF 494
Query: 485 YMRRSTCTINYGN 497
Y T +
Sbjct: 495 YTDLKTIALPLRP 507
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 308 bits (792), Expect = 1e-99
Identities = 137/497 (27%), Positives = 231/497 (46%), Gaps = 22/497 (4%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
F++G + G SI P + IA + A+ E + + A K W +
Sbjct: 16 SHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMA 75
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSR-QLNGS 137
RG ++++ D +RE+ L L +++ GK + E + + D +F G++ LNG
Sbjct: 76 RGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGD 135
Query: 138 VIPSERPNHMML-ETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
IP PLGV I A+N+P + W A ALV GN +V+K + TPL
Sbjct: 136 YIPLGGDFAYTKRV---PLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLG 192
Query: 197 TIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
+ I +++ E LP +F G + G + P ++ VS TGS G V
Sbjct: 193 ALKIAEILIEA----GLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAA 248
Query: 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+EL G + +I+ DDADI+ AV + ++GQ C+ R+ + +
Sbjct: 249 AGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARF 308
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--- 373
L+ L + + +GDPL+ T LGPL + ++ IE K++G ++TGG +
Sbjct: 309 LENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVA 368
Query: 374 SEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
EG +VQPT+ +++ I +EE+F PV+ V+ F +E + N+ GL+ +FT
Sbjct: 369 GEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTA- 427
Query: 433 PENIFKWLG-PHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491
++ + G + G + +N N + FGG K +G GRE + + + Y T
Sbjct: 428 --DLARAHRVVDGLEAGTLWINTY-NLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV 484
Query: 492 TINYGN-ELPLAQGINF 507
++ G + P A+ + F
Sbjct: 485 YVSTGKVDAPYAENLYF 501
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 304 bits (781), Expect = 3e-98
Identities = 145/492 (29%), Positives = 228/492 (46%), Gaps = 29/492 (5%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELP 76
F+N +W G NP +K+ V E ED ++ +KA +A +I W +
Sbjct: 22 KIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMD 81
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLN 135
A +RG ++ ++ D + L + ++ GK+ + ++ I + G + ++
Sbjct: 82 ASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQ 141
Query: 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195
G IP + N P+GV G I +NFP + W AL CGN VV K A TPL
Sbjct: 142 GRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 200
Query: 196 ITIAITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG 249
+ + L+ E V N +PG G G AI+ + V+FTGST+VG
Sbjct: 201 TALHMGSLIKEAGFPPGVV--NIVPGY-------GPTAGAAISSHMDVDKVAFTGSTEVG 251
Query: 250 LMVQQTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLI 308
++++ + + LEL G + I+ DAD+ AV GQ C RL +
Sbjct: 252 KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFV 311
Query: 309 HESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTG 368
ESIY + + V+ K+ +G+PL G GP E + IE+ K +G K+ G
Sbjct: 312 EESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECG 371
Query: 369 GSVIESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSS 427
G ++G F+QPT+ +++ I KEE+F PV +MKF++ ++ +K N+ GLS+
Sbjct: 372 GGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAG 431
Query: 428 IFTRSPENIFKWLG-PHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
IFT +I K + +G V VN + FGG K +G GRE G + +Y
Sbjct: 432 IFTN---DIDKAITVSSALQSGTVWVNC-YSVVSAQCPFGGFKMSGNGRELGEYGFHEYT 487
Query: 487 RRSTCTINYGNE 498
T TI +
Sbjct: 488 EVKTVTIKISQK 499
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 301 bits (773), Expect = 2e-97
Identities = 119/445 (26%), Positives = 203/445 (45%), Gaps = 9/445 (2%)
Query: 33 GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALR 92
S+NP Q +A + A+ ++ E + + K W +R + +R IG ALR
Sbjct: 6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALR 65
Query: 93 EKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETW 152
+ + ++ EMGK + + EV + +CD+ + P+ N + +
Sbjct: 66 AHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAEHGPAMLNP-EPTLVENQQAVIEY 124
Query: 153 NPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
PLGV+ I +NFP + A L+ GN + K AP I ++
Sbjct: 125 RPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARI----LAEAG 180
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
P ++ E + DPRI+ V+ TGS + G + KC+LEL G++
Sbjct: 181 TPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDP 240
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332
I+++DAD++LAV++ + GQ C +R ++ E I Q D+ V +K+GDP
Sbjct: 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDP 300
Query: 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTAD 391
L + LGP+ + R + ++ ++G ++L GG I EGN+ T++ +++P
Sbjct: 301 LVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMT 360
Query: 392 IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVN 451
++ELF PV + + A+ + N GLS++IFT + + G V
Sbjct: 361 AFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEM--AARLECGGVF 418
Query: 452 VNIPTNGAEIGGAFGGEKATGGGRE 476
+N + AFGG K +G GRE
Sbjct: 419 INGYSASDA-RVAFGGVKKSGFGRE 442
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 303 bits (778), Expect = 2e-97
Identities = 131/514 (25%), Positives = 234/514 (45%), Gaps = 31/514 (6%)
Query: 1 MEFAKQEYEFLSEIGLSPETP-GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLED 57
Y + L+ + P F+ G++ T ++INP + I V A + D
Sbjct: 16 ESECVINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSD 75
Query: 58 YEEGMKACSEA--SKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-I 114
++ + A EA + +W ++ A RG ++ ++ D + + L + +++ G +
Sbjct: 76 VDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALK 135
Query: 115 GEVQEVIDMCDFAVGLSRQLNGSVIP---SERPNHMMLETWNPLGVVGVITAFNFPCAVL 171
V I + G ++ G+ IP + ++ L P+GV G++ +N+P +L
Sbjct: 136 THVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMML 195
Query: 172 GWNACIALVCGNCVVWKGAPTTPLITIAITKLVSE------VFERNKLPGAIFTSFCGGA 225
W L GN VV K A TPL + +L + V N LPG+ G+
Sbjct: 196 SWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVV--NILPGS-------GS 246
Query: 226 EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ-RFGKCLLELSGNNAIIIMDDADIKLA 284
+GQ ++ P + + FTGST+VG + ++ K LEL G + +II D D+ A
Sbjct: 247 LVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKA 306
Query: 285 VRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHT 344
V+ + + G+ C RL + ESI+ + ++V+ +++KIG+PLE+ T GP +
Sbjct: 307 VQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNH 366
Query: 345 PESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTI-VEISPTADIVKEELFAPVLY 403
+ + + +G ++ GG+ + G F QPT+ ++ I KEE F P++
Sbjct: 367 EAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMI 426
Query: 404 VMKFQ--TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEI 461
+ +F + + N+ GL+S +FTR G V +N N ++
Sbjct: 427 ISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYV--SDKLQAGTVFINTY-NKTDV 483
Query: 462 GGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495
FGG K +G G++ G + +Y+R T T Y
Sbjct: 484 AAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFEY 517
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 302 bits (776), Expect = 2e-97
Identities = 142/491 (28%), Positives = 219/491 (44%), Gaps = 29/491 (5%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELP 76
F+N +W T ++NP + I V E ED ++ +KA A ++ W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLN 135
A RG ++ ++ D + +L L +++ GK + ++ V+ + G + + +
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 140
Query: 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195
G IP + + P+GV G I +NFP + W AL GN VV K A TPL
Sbjct: 141 GKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 196 ITIAITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG 249
+ + L+ E V N +PG G G AIA + V+FTGST++G
Sbjct: 200 TALYVANLIKEAGFPPGVV--NIVPGF-------GPTAGAAIASHEDVDKVAFTGSTEIG 250
Query: 250 LMVQQTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLI 308
++Q + LEL G + IIM DAD+ AV FA GQ R +
Sbjct: 251 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFV 310
Query: 309 HESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTG 368
E IY +++ V K +G+P + T GP K I K +G K+L G
Sbjct: 311 QEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCG 370
Query: 369 GSVIESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSS 427
G + G F+QPT+ ++ I KEE+F PV+ ++KF+T EE V N+ GL+++
Sbjct: 371 GGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAA 430
Query: 428 IFTRSPENIFKWLG-PHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
+FT+ ++ K G V VN + FGG K +G GRE G + Y
Sbjct: 431 VFTK---DLDKANYLSQALQAGTVWVNC-YDVFGAQSPFGGYKMSGSGRELGEYGLQAYT 486
Query: 487 RRSTCTINYGN 497
T T+
Sbjct: 487 EVKTVTVKVPQ 497
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 302 bits (776), Expect = 2e-97
Identities = 129/493 (26%), Positives = 220/493 (44%), Gaps = 33/493 (6%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
F+ GKW + + P + + V A+ D + + A A + W P +
Sbjct: 12 FIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHE 71
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSV 138
R V+ L E+ +LL+ E G+ + ++ G + ++ +
Sbjct: 72 RAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTE 131
Query: 139 IPSERPNHMML--ETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
+ ++ E P+GVVG I A+N P + AL+ G +V K A TPL
Sbjct: 132 TRTGSYGQSIVSRE---PVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLT 188
Query: 197 TIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
A+ ++ +EV LP + + GG E GQA+ +P I + +FTGS+ VG V +
Sbjct: 189 ANALAEVFAEV----GLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244
Query: 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ C LEL G +A II++D D+ A+ ++F+ V AGQ C R+L S Y +
Sbjct: 245 AEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEI 304
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--S 374
+ + + + +G P + +GPL + + R E I +G +++ GG E
Sbjct: 305 VAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLD 364
Query: 375 EGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
G F+QPT+ ++ I +EE+F PVL ++ + T E+A+ I N GL+ S++T
Sbjct: 365 NGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDV 424
Query: 434 ENIFKWLGPHGSD------TGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487
G TG +N + G FGG K +G GRE G + + + +
Sbjct: 425 P--------KGIKISQQIRTGTYGIN--WYAFDPGSPFGGYKNSGIGRENGPEGVEHFTQ 474
Query: 488 RSTCTINYGNELP 500
+ + + G +
Sbjct: 475 QKSVLLPMGYTVA 487
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 301 bits (774), Expect = 3e-97
Identities = 114/445 (25%), Positives = 204/445 (45%), Gaps = 11/445 (2%)
Query: 34 PTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALRE 93
S+NP N+ A+ + + +E + K W R E++ I +AL+E
Sbjct: 4 SKYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKE 63
Query: 94 KLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN 153
L +++++EMGK+L E EV+ + +C++ ++ + +
Sbjct: 64 HEDELAKMMTLEMGKLLSESKEEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYY-LKQ 122
Query: 154 PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL 213
GV+ +NFP + + GN ++ K A P K+ +R
Sbjct: 123 STGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKI----IKRAGA 178
Query: 214 PGAIFTS-FCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
P + + ++ IA DPRI V+ TGS + G V + + K +EL GN+A
Sbjct: 179 PEGSLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDA 237
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332
I++DDAD ++ + A GQ CT+ +R+++ +S Y VL +L +V+ +K GDP
Sbjct: 238 FIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDP 297
Query: 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTAD 391
LE T L P+++ ++++ E ++ G K+ I+S+G F +PTI+ +I+
Sbjct: 298 LEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNP 357
Query: 392 IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVN 451
+ +E+F P+ V + A+++ N GL SS+ + K +TG+
Sbjct: 358 VFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKV--SAQIETGMTV 415
Query: 452 VNIPTNGAEIGGAFGGEKATGGGRE 476
+N + FGG K +G GRE
Sbjct: 416 INGRWITSG-ELPFGGIKKSGYGRE 439
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 296 bits (759), Expect = 7e-95
Identities = 127/471 (26%), Positives = 214/471 (45%), Gaps = 27/471 (5%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
F+ G++ T+ ++P + I + D E ++ A K W +L A
Sbjct: 14 VNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTART 73
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R ++R + +RE H L +L E GK+L EV D+ + + G ++
Sbjct: 74 RQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDIL 133
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
PS+ + + P GVV ITA+NFP A+ G AL+ GN +V K TPL T
Sbjct: 134 PSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTE 193
Query: 200 ITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG--LMVQ--Q 254
+ ++ + LP + G G+ +GQ + + P +++ TGST G + +
Sbjct: 194 LGRI----AKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAE 249
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ +LEL G +++MDDAD+ A L+ GQ CT RL +H S+Y
Sbjct: 250 YMT----PVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYD 305
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
+ + + + K +K+GDP++ + +GP N + + QG + TGG
Sbjct: 306 EFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATV 365
Query: 375 E----GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429
E G + +PT++ ++ +V EE F P+L ++K + E+A++ N GLS+ +
Sbjct: 366 EGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVH 425
Query: 430 TRSPENIFKWLGPHGSDTGIVNVN--IPTNGAEIGGAFGGEKATGGGREAG 478
T+S NI + + G V +N + G G K +G G E G
Sbjct: 426 TQSFANINQA--ISDLEVGEVYINRGMGEQHQ---GFHNGWKQSGFGGEDG 471
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 294 bits (755), Expect = 2e-94
Identities = 131/473 (27%), Positives = 225/473 (47%), Gaps = 32/473 (6%)
Query: 22 GCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
FV G+W T +P + + V + + + ++A EA W E+ A +R
Sbjct: 14 DSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERS 73
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
++R+ + + + L R+++ E GK L E GE+ ++ +R++ G +I +
Sbjct: 74 SLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHT 133
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
+ L P+GV VIT +NFP A++ AL G VV K A TP +A+
Sbjct: 134 PAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALA 193
Query: 202 KLVSEVFERNKLPGAIF----TSFCGGAEIGQAIAKDPRISLVSFTGSTKVG--LMVQ-- 253
+L + +P ++ S E+G+AI DP +S +SFTGST G L+
Sbjct: 194 EL----ASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAA 249
Query: 254 QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+V + +EL G I+ D A++ AV + + GQ C + L+ I+
Sbjct: 250 NSVK----RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIH 305
Query: 314 QTVLDQLVD-VYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI 372
+ + + K +++G+ E+GT GPL ++ + EK + + S+G ++TGG
Sbjct: 306 DAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH 365
Query: 373 ESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+ NF +PT++ ++ EE F P+ V+KF T EEA+ I N+ GL+ +++
Sbjct: 366 QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQ 425
Query: 432 SPENIFK---WLGPHGSDTGIVNVN--IPTNGAEIGGAFGGEKATGGGREAGS 479
P I++ L + G+V VN + ++ FGG K +G GRE GS
Sbjct: 426 DPAQIWRVAEQL-----EVGMVGVNEGLISSVE---CPFGGVKQSGLGRE-GS 469
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 289 bits (743), Expect = 1e-92
Identities = 140/471 (29%), Positives = 227/471 (48%), Gaps = 30/471 (6%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
+NG+W +G + NP N K+ +V + ++ + A + A W L A +
Sbjct: 11 QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKE 70
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R ++R + + E L RL+++E GK L E GE+ ++ +++ G I
Sbjct: 71 RATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTI 130
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
P + + ++ P+GV IT +NFP A++ A AL G +V K A TP +A
Sbjct: 131 PGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALA 190
Query: 200 ITKLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVG--LMVQ--Q 254
+ +L R +P +F G A +G + +P + +SFTGST++G LM Q +
Sbjct: 191 LAEL----AIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK 246
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ K LEL GN I+ DDAD+ AV L + AGQ C RL + + +Y
Sbjct: 247 DIK----KVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYD 302
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
++L ++ IGD L+ G +GPL ++ E+ I + +G +++ GG E
Sbjct: 303 RFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHER 362
Query: 375 EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
GNF QPTI+ ++ A + KEE F P+ + +F+ + + N GL++ + R
Sbjct: 363 GGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDL 422
Query: 434 ENIFK---WLGPHGSDTGIVNVN--IPTNGAEIGGAFGGEKATGGGREAGS 479
+F+ L + GIV +N I +N FGG KA+G GRE GS
Sbjct: 423 SRVFRVGEAL-----EYGIVGINTGIISNEV---APFGGIKASGLGRE-GS 464
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 289 bits (742), Expect = 1e-92
Identities = 136/478 (28%), Positives = 218/478 (45%), Gaps = 44/478 (9%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
++ G+W+ T +P + + TV + + ++A A W A +
Sbjct: 14 QAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKE 73
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGL-------SR 132
R ++R+ D + L +L+ E GK L E GE+ +A +
Sbjct: 74 RAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEI-------AYAASFIEWFAEEGK 126
Query: 133 QLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPT 192
++ G +P+ N ++ P+GV IT +NFP A++ AL G +V K A +
Sbjct: 127 RVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAES 186
Query: 193 TPLITIAITKLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVG-- 249
TP +A+ L ER +P + + G IG I +P + +SFTGST VG
Sbjct: 187 TPFSALAMAFL----AERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRL 242
Query: 250 LMVQ--QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLL 307
LM Q TV K LEL GN I+ DDAD+ AV + + GQ C R
Sbjct: 243 LMAQSAPTVK----KLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFF 298
Query: 308 IHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILT 367
+HE +Y D+L ++K+G E G LGPL + K E I + ++G ++T
Sbjct: 299 VHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMT 358
Query: 368 GGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSS 426
GG F +PT++ + P D+ KEE F P+ + +F + EE V++ N GL++
Sbjct: 359 GGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAA 418
Query: 427 SIFTRSPENIFK---WLGPHGSDTGIVNVN--IPTNGAEIGGAFGGEKATGGGREAGS 479
+++R +++ L + G+V +N + +N FGG K +G GRE GS
Sbjct: 419 YLYSRDIGRVWRVAEAL-----EYGMVGINTGLISNEV---APFGGVKQSGLGRE-GS 467
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 286 bits (735), Expect = 3e-91
Identities = 138/471 (29%), Positives = 224/471 (47%), Gaps = 32/471 (6%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
C VNG+W A G T+ NP + I TV S+ +E + A ++A W A +
Sbjct: 34 QCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKE 93
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R ++R+ D + + +++ E GK L E GEV ++ ++++ G I
Sbjct: 94 RAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTI 153
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
P+ + + P+GV IT +NFP A++ A AL G ++ + A TPL +A
Sbjct: 154 PAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALA 213
Query: 200 ITKLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVG--LMVQ--Q 254
+ L E+ +P + G A EIG + + + +SFTGST+VG LM Q
Sbjct: 214 LGVL----AEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAP 269
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
T+ + LEL GN I+ DDAD+ AV + + AGQ C R+ + +Y
Sbjct: 270 TIK----RISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYD 325
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
++L K++K+G+ E G ++GP+ ++ + IE+ S+G K++TGG E
Sbjct: 326 KFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGK--EL 383
Query: 375 EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
G F +P I+ ++ + KEE F P+ + F T EE + N GL++ +T +
Sbjct: 384 GGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENF 443
Query: 434 ENIFK---WLGPHGSDTGIVNVN--IPTNGAEIGGAFGGEKATGGGREAGS 479
+ L + G+V N + +N FGG K +G GRE GS
Sbjct: 444 SRAIRVSEAL-----EYGMVGHNTGLISNEV---APFGGVKQSGLGRE-GS 485
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 288 bits (738), Expect = 4e-91
Identities = 120/500 (24%), Positives = 207/500 (41%), Gaps = 35/500 (7%)
Query: 11 LSEIGLSPETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEAS 69
L ++ E C V + ++P N K+A A + A A
Sbjct: 54 LKDLKGQTEAIPCVVGDEEVWTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAAR 113
Query: 70 KIWMELPAPKRGEVVRQIGDALREK-LHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFA 127
K W P R +V + D L + + GK + + I E+ID F
Sbjct: 114 KEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFN 173
Query: 128 VGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVW 187
+ +L G S P+ G V I+ FNF A+ G A + GN V+W
Sbjct: 174 AKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFT-AIGGNLAGAPALMGNVVLW 232
Query: 188 KGAPTTPLITIAITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVS 241
K + T L + A+ +++ E + +P G G + + ++
Sbjct: 233 KPSDTAMLASYAVYRILREAGLPPNII--QFVPAD-------GPTFGDTVTSSEHLCGIN 283
Query: 242 FTGSTKVGLMVQQTVHQRFGKC------LLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295
FTGS + + V Q + E G N + AD+ V L +A
Sbjct: 284 FTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEY 343
Query: 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEK-GTLLGPLHTPESRKNFEKG 354
GQ+C+ C RL + +S++ + +L++ + ++K+GDP E GT + ++ +K
Sbjct: 344 GGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKW 403
Query: 355 IENIKSQGG-KILTGGSVIESEGNFVQPTIVEI-SPTADIVKEELFAPVLYVMKF--QTF 410
+E+ +S IL GG ES G +V+P I+E P I+KEE+F PVL V + +
Sbjct: 404 LEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKY 463
Query: 411 EEAVK-INNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGG-AFGGE 468
E +K ++++ GL+ ++F + + + + G +N + G+ +G FGG
Sbjct: 464 RETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGA 523
Query: 469 KATGGGREAGSDSWKQYMRR 488
+A+G + G Y+ R
Sbjct: 524 RASGTNDKPGG---PHYILR 540
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 285 bits (733), Expect = 4e-91
Identities = 118/479 (24%), Positives = 219/479 (45%), Gaps = 34/479 (7%)
Query: 24 FVNGKW-KAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++NG W P + I+P + A + S D ++ + A +A + W +R
Sbjct: 29 YINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERL 88
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
V +I + ++ + + +S+EMG + + + ++ +
Sbjct: 89 GFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL 148
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
E +L ++ +GVVG+IT +N+P + AL+ G +V K + PL +
Sbjct: 149 IEGNEQAIL-HYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLF 207
Query: 201 TKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
+++ E VF N + G GA +G ++ P + ++SFTGST+ G + +
Sbjct: 208 AEILDEAALPSGVF--NLINGD-------GANVGSYLSAHPDLEMISFTGSTRAGKDISK 258
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ LEL G A II DADI A++ + +GQ C R+L+ ++IY
Sbjct: 259 NASNTLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYD 317
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI-- 372
+ D+ ++ ++G + G +GP+ + E + I++ +G ++TGG+ +
Sbjct: 318 KAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPM 377
Query: 373 -ESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
G +V+PT+ ++ P I +EE+F PVL ++ F T +EAV + N GL++ I +
Sbjct: 378 GMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQS 437
Query: 431 RSPE---NIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
+ I + +G+V VN + G FGG K +G RE G K+++
Sbjct: 438 QDRSKCRRIAAQV-----RSGMVEVN--GHELPGGSYFGGVKFSGRAREGGLWGIKEFL 489
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 285 bits (733), Expect = 6e-91
Identities = 135/478 (28%), Positives = 209/478 (43%), Gaps = 45/478 (9%)
Query: 23 CFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
++ G+WK A G T NP IA V ED ++A A ++ P R
Sbjct: 14 GYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETR 73
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGL-------SRQ 133
+ + I D L+E +GR+L +E GK E GEV D+A G
Sbjct: 74 RKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQGEV-------DYAAGFFDYCAKHISA 126
Query: 134 LNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTT 193
L+ IP + + + P+GV G+I +NFP ++ AL G V K A T
Sbjct: 127 LDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASET 186
Query: 194 PLITIAITKLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVG--L 250
PL IA + ++ LP + G A IG+ + + + ++SFTGST+VG L
Sbjct: 187 PLTMIAFFSV----MDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKL 242
Query: 251 MVQ--QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLI 308
+V + V K LEL GN I+ DDAD++ A +++ GQ C R+ +
Sbjct: 243 IVDTAEQVK----KLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFV 298
Query: 309 HESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTG 368
HE + +L + ++ +GD + G +GPL + ++ +++ +G ++ G
Sbjct: 299 HEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAG 358
Query: 369 GSVIES-EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSS 426
E +G F PT+V + +EE F P++ + F+T EE + N GL+S
Sbjct: 359 KQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLAS 418
Query: 427 SIFTRSPENIFK---WLGPHGSDTGIVNVN--IPTNGAEIGGAFGGEKATGGGREAGS 479
+FT E + L G V N FGG KA+G GRE G
Sbjct: 419 YVFTADAERAQRVAAGL-----RFGHVGWNTGTGPTPE---APFGGMKASGIGRE-GG 467
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 284 bits (730), Expect = 8e-91
Identities = 117/476 (24%), Positives = 216/476 (45%), Gaps = 31/476 (6%)
Query: 24 FVNGKW-KAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++NG+W +++ T+ INP + I V + + D ++ ++A + + +R
Sbjct: 11 YINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQ 70
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
++ +I + + + ++ E+G L Q ++ A
Sbjct: 71 ALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEERR 130
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
+ + ++ E +GV G+IT +NFP A G+ VV K + TP + +
Sbjct: 131 GD--DLVVKE---AIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVIL 185
Query: 201 TKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
++ + VF N + G GA +G +++ P++ ++SFTGS G + +
Sbjct: 186 AEIFDKVGVPKGVF--NLVNGD-------GAGVGNPLSEHPKVRMMSFTGSGPTGSKIME 236
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ F K LEL G + I++DD DIK A ++ V GQ CT R+L+ I
Sbjct: 237 KAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKD 296
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI-- 372
L +L + + QV++G+P E GT +GP+ + + + I +G ++ GG
Sbjct: 297 AFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPE 356
Query: 373 -ESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+G F +PTI + + I +EE+F PV+ V+ + +EA++I N GL+ +
Sbjct: 357 GLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIG 416
Query: 431 RSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
+ E + K + G V +N G + FGG K +G GRE G ++++
Sbjct: 417 KDKETLHKV--ARSIEAGTVEIN--EAGRKPDLPFGGYKQSGLGREWGDYGIEEFL 468
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 273 bits (699), Expect = 7e-86
Identities = 86/482 (17%), Positives = 157/482 (32%), Gaps = 39/482 (8%)
Query: 33 GPTVSSINPVNNQKIATVV-EASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDAL 91
+ N + + + + + A ++ ++ + L KR ++R I L
Sbjct: 6 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASEL 65
Query: 92 REKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGS--------VIPSER 143
+ + +E GE+ + + + +
Sbjct: 66 EARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPL 125
Query: 144 PNHMMLETWNPLGVVGVITAFNFPCA--VLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
P + LG V V A NFP A G + AL G V+ KG P + +
Sbjct: 126 PKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVA 185
Query: 202 KLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
+ + + ++ +LP AIFT G +GQA+ P I V FTGS G + H+R
Sbjct: 186 ECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERP 245
Query: 261 GK--CLLELSGNNAIIIMDDADIKLA--VRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
EL N I A A + + GQ CT + +
Sbjct: 246 EPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQA 305
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+ + TLL P + + G + + E
Sbjct: 306 FIETA-----QSLIRQQSPSTLLTPGI---RDSYQSQVVSRGSDDGIDVTFSQA----ES 353
Query: 377 NFVQPTIVEISPTA----DIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
V + S +EE+F P ++ + + + ++ + L+++I
Sbjct: 354 PCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATE 413
Query: 433 PE-NIFKWLGPHGSD-TGIVNVNIPTNGAEIGGA--FGGEK-AT--GGGREAGSDSWKQY 485
+ L P + G + N G E+G A GG A+ G+++ ++
Sbjct: 414 EDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRW 473
Query: 486 MR 487
+R
Sbjct: 474 LR 475
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 268 bits (688), Expect = 4e-84
Identities = 95/494 (19%), Positives = 158/494 (31%), Gaps = 44/494 (8%)
Query: 23 CFVNGKWKAHGPTVSSINPVNNQKIAT-VVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
V G+W T +S A ++E +A EA + +R
Sbjct: 32 HLVAGEWLDGAGTFASAPAHG---PAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERA 88
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN------ 135
+R I D + + + + S E G GE + +
Sbjct: 89 AFLRAIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRV 148
Query: 136 GSVIPSERP--NHMMLETWNPLGVVGVITAFNFPCA--VLGWNACIALVCGNCVVWKGAP 191
+ +P +P + P+G V V A NFP A G + AL G VV KG
Sbjct: 149 DAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHS 208
Query: 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGL 250
P + + V + + +F+ G ++G A+ + P I V FTGS G
Sbjct: 209 AHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGR 268
Query: 251 MVQQTVHQRFGK--CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT---AGQRCTTCRR 305
+ R EL N + ++ +A A A AGQ CT
Sbjct: 269 ALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGI 328
Query: 306 LLIHESI-YQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGK 364
++ E V+ +V L G K
Sbjct: 329 AVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARF---------ATRNAVK 379
Query: 365 ILTGGSVIESEGNFVQPTIVEISPTA----DIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
L ES G P + E + + EE+F P+ V++ + E ++
Sbjct: 380 PLLAT---ESSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGF 436
Query: 421 PQGLSSSIFTRSPE--NIFKWLGPHGSDTGIVNVNIPTNGAEIGGA---FGGEKATGGGR 475
L+++I + + + G V VN G E+ + G A+
Sbjct: 437 QGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFG 496
Query: 476 --EAGSDSWKQYMR 487
G+ S ++++R
Sbjct: 497 ATSVGTMSIRRFLR 510
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 266 bits (683), Expect = 7e-84
Identities = 126/440 (28%), Positives = 217/440 (49%), Gaps = 18/440 (4%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++NG+W +NP + + V ++ ED + + +EA K W ++ P+R
Sbjct: 9 YINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRA 68
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
++ L + L L++IE GK E +GEV I+ +FA G + G + S
Sbjct: 69 RILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLAS 128
Query: 142 ERPNHMMLETWN---PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ +E N P+GVVG I FNFP V W +A+ GN + K + TPL+T
Sbjct: 129 IATD---VEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTE 185
Query: 199 AITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
+ +L + LP +F G ++ I + P I +SF GS VG V + +
Sbjct: 186 KLVELFEKA----GLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE 241
Query: 259 RFGKCLLELSG-NNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
K + L+G N I+++DA+++ V +++ AA G+AG+RC C + + E I +
Sbjct: 242 N-LKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFM 300
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE-G 376
+L + +KIG+ L+ G LGP+ +++K IE +G +++ G S+ G
Sbjct: 301 AKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDG 360
Query: 377 NFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435
FV PTI + ++ I K+E+FAPVL V++ + +EA++I N + +FT +
Sbjct: 361 YFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNA 420
Query: 436 IFKWLGPHGSDTGIVNVNIP 455
I + D G++ +N+
Sbjct: 421 IRYFR--ENIDAGMLGINLG 438
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 256 bits (657), Expect = 2e-79
Identities = 118/444 (26%), Positives = 203/444 (45%), Gaps = 22/444 (4%)
Query: 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
F++GK A G + NP + TV AS D +++ A W +R
Sbjct: 30 FIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRA 89
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
V + L + ++ L +LS E GK + + G++ +++C+F +G+
Sbjct: 90 RVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEG 149
Query: 142 ERPNHMMLETWN---PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
P ++ ++ P+G+ IT FNFP + W A+ CGN + K + P + I
Sbjct: 150 AGPG---IDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPI 206
Query: 199 AITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
+ +L+ E LP I G AI P I+ VSF GST + V T
Sbjct: 207 RLAELMIEA----GLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAM 262
Query: 259 RFGKCLLELSG-NNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL-LIHESIYQTV 316
GK G N +IIM DAD+ A +++ A G+AG+RC + E +
Sbjct: 263 N-GKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRL 321
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--- 373
+D+LV + + ++IG ++ +GP+ T E+ + I++ QG K++ G +
Sbjct: 322 IDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQG 381
Query: 374 -SEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
G+F+ + + ++P DI K E+F PVL V++ + +EEA+ + G +I+TR
Sbjct: 382 YENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTR 441
Query: 432 SPENIFKWLGPHGSDTGIVNVNIP 455
+ + + G+V VN+P
Sbjct: 442 DGDAARDFA--SRINIGMVGVNVP 463
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 242 bits (619), Expect = 1e-74
Identities = 72/455 (15%), Positives = 153/455 (33%), Gaps = 34/455 (7%)
Query: 53 ASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE 112
S+++ +++ ++A K + + +V+ I DA L ++ E G + +
Sbjct: 9 RSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQ 68
Query: 113 GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLG 172
+V + + + + + E ++E PLGVV + P + +
Sbjct: 69 D--KVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVI 126
Query: 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAI 231
+ I++ GN +V+ P + +++SE E+ P + + +
Sbjct: 127 YKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQL 186
Query: 232 AKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFA 291
K +++ TG + + + + GN I A+I AV+ +L +
Sbjct: 187 MKHKDTAVILATGGSAMVKAAYSSGT----PAIGVGPGNGPAFIERSANIPRAVKHILDS 242
Query: 292 AVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351
G C + + +++ + V+ + E L + P N
Sbjct: 243 KTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDA--EAVQLGKFILRPNGSMNP 300
Query: 352 E---KGIENIKSQ-GGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKF 407
K +++I + G + V+ +E V E AP+L
Sbjct: 301 AIVGKSVQHIANLAGLTVPADARVLIAEETKVGA--------KIPYSREKLAPILAFYTA 352
Query: 408 QTFEEAVKINNSVPQ----GLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTN----GA 459
+T++EA +++ + G + I + E I + + VN P GA
Sbjct: 353 ETWQEACELSMDILYHEGAGHTLIIHSEDKEIIRE-FA-LKKPVSRLLVNTPGALGGIGA 410
Query: 460 EIGGAFGGEKATG-GGREAGSD--SWKQYMRRSTC 491
G G + SD +
Sbjct: 411 TTNLVPALTLGCGAVGGSSSSDNIGPENLFNIRRI 445
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 237 bits (608), Expect = 4e-73
Identities = 72/422 (17%), Positives = 140/422 (33%), Gaps = 18/422 (4%)
Query: 50 VVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKI 109
+ ++ + + + +A + + + ++ R A + L + E G
Sbjct: 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMG 60
Query: 110 LPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCA 169
+ E + Q G I E N + P+G++ I P +
Sbjct: 61 IVEDKVIKNHFASEFIYNKYKDEQTCG--ILEEDDNLGTMTIAEPVGIICGIVPTTNPTS 118
Query: 170 VLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIG 228
+ + I+L N +++ P T KLV + P I E+
Sbjct: 119 TAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELS 178
Query: 229 QAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSV 288
A+ K I+L+ TG + + + +GN ++I + ADIK AV SV
Sbjct: 179 NALMKHDDIALILATGGPGMVKAAYSSGK----PAIGVGAGNVPVVIDETADIKRAVASV 234
Query: 289 LFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESR 348
L + G C + + +++ + +Y V ++ V +K L
Sbjct: 235 LMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADK-VRKVLLIDGALN 293
Query: 349 KNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQ 408
+ G + ++ + + D E +P L + +
Sbjct: 294 AKIVG-----QPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGMFRAD 348
Query: 409 TFEEAV----KINNSVPQGLSSSIFTRSPENIFK-WLGPHGSDTGIVNVNIPTNGAEIGG 463
FE+AV + G +S ++T N + T + +NIPT IG
Sbjct: 349 NFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGD 408
Query: 464 AF 465
+
Sbjct: 409 LY 410
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 3e-34
Identities = 67/301 (22%), Positives = 136/301 (45%), Gaps = 40/301 (13%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACI-----ALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208
PLGVV VI +N+P +N I A+ GN VV K + + + + ++ +
Sbjct: 120 PLGVVLVIGTWNYP-----FNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL 174
Query: 209 ERNKLPGAIFTSFCGGAEIGQAIAKDP--RISLVSFTGSTKVGLMVQQTVHQRFGKCLLE 266
+++ ++ GG + K+ I +TGST VG ++ + LE
Sbjct: 175 DKD-----LYPVINGGVPETTELLKERFDHIL---YTGSTGVGKIIMTAAAKHLTPVTLE 226
Query: 267 LSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ 326
L G + + + D+ +A R + + +GQ C +L SI ++++L K+
Sbjct: 227 LGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKE 286
Query: 327 VKIGDPLEKGTLLGPLHTPESR----KNFEKGIENIKS--QGGKILTGGSVIESEGNFVQ 380
D + R ++F++ + +G K+ GG+ + ++
Sbjct: 287 FYGEDAKKSRDY--------GRIISARHFQR----VMGLIEGQKVAYGGTGDAAT-RYIA 333
Query: 381 PTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKW 439
PTI+ ++ P + +++EE+F PVL ++ ++ EEA++ N + L+ +F+ + + I K
Sbjct: 334 PTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKM 393
Query: 440 L 440
+
Sbjct: 394 I 394
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 8e-33
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 39/300 (13%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACI-----ALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208
P GV +I FN+P N + A++ GN + K + TTP + I K+++E F
Sbjct: 130 PYGVTYIIGPFNYP-----VNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAF 184
Query: 209 ERNKLPGAIFTSFCGGAEIGQAIAKDP--RISLVSFTGSTKVGLMVQQTVHQRFGKCL-- 264
GG + + P I FTGS VG + V Q K L
Sbjct: 185 APE-----YVAVIQGGRDENSHLLSLPFDFIF---FTGSPNVG----KVVMQAAAKHLTP 232
Query: 265 --LELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322
LEL G +I++ DAD+ V ++F +GQ L +H S+ +L++LV+
Sbjct: 233 VVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVE 292
Query: 323 VYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPT 382
K + + G L+ + + ++ + +++ G++L G + + T
Sbjct: 293 RVKTE-LPEINSTGKLV-------TERQVQRLVSLLEATQGQVLVGSQA-DVSKRALSAT 343
Query: 383 IV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK-INNSVPQGLSSSIFTRSPENIFKWL 440
+V + ++ EELF P+L V++F + A+ +N P+ L+ +F + + +
Sbjct: 344 VVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGII 403
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 8e-10
Identities = 78/537 (14%), Positives = 136/537 (25%), Gaps = 163/537 (30%)
Query: 5 KQEYEFL-SEIGLSPETPGC----FVNGKWKAHGPTVSSINPVN---NQKIATVVEASLE 56
+ Y+FL S I P ++ + + + N Q + +A LE
Sbjct: 88 RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN-DNQVFAKYNVSRLQPYLKLRQALLE 146
Query: 57 DYEE------GMKACSEASKIWMELPAPKRGEVVRQ---------IG-----DALREKLH 96
G+ K W+ L +V + + + + E L
Sbjct: 147 LRPAKNVLIDGVLGSG---KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203
Query: 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMML----ETW 152
L + + ++ I L R L +P L
Sbjct: 204 KLLYQID-PNWTSRSDHSSNIKLRIH--SIQAELRRLL------KSKPYENCLLVLLNVQ 254
Query: 153 NPLGVVGVITAFNFPCAVL--GWNACIALVCGN------CVVWKGAPTTP---------L 195
N AFN C +L + + TP
Sbjct: 255 NA----KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310
Query: 196 ITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDP-------RISLVSFTGSTKV 248
+ L EV N P + + I ++I ++ T +
Sbjct: 311 LDCRPQDLPREVLTTN--PRRL-------SIIAESIRDGLATWDNWKHVNCDKLTTIIES 361
Query: 249 GLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQR---CTTCRR 305
L V + R K LS + A I + S+++ V + +
Sbjct: 362 SLNVLEPAEYR--KMFDRLS-----VFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY 414
Query: 306 LLIHE-------SIYQTVLD-------------QLVDVYKQVKIGDPLEKGTL------- 338
L+ + SI L+ +VD Y K D +
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFY 474
Query: 339 ------LGPLHTPESRKNFEKG------IEN-IKSQGGKILTGGSV-------------- 371
L + PE F +E I+ GS+
Sbjct: 475 SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI 534
Query: 372 ----------IESEGNFVQP--TIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKI 416
+ + +F+ + S D+++ L A + FEEA K
Sbjct: 535 CDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAI-----FEEAHKQ 586
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 7e-08
Identities = 65/469 (13%), Positives = 131/469 (27%), Gaps = 170/469 (36%)
Query: 5 KQE---YEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEG 61
KQE +F+ E+ L N K+ +S I Q Y E
Sbjct: 74 KQEEMVQKFVEEV-LRI-------NYKF-----LMSPIKTEQRQP-----SMMTRMYIE- 114
Query: 62 MKACSEASKIWMELPAPKRGEVVR-QIGDALREKLHHL--GRLLSIE-MGKILPEGIGEV 117
+ +++ + + V R Q LR+ L L + + I+ + G G
Sbjct: 115 -----QRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVL-----GSG-- 162
Query: 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177
+ + V S + V +F
Sbjct: 163 KTW-------------VALDVCLSYK----------------VQCKMDFK---------- 183
Query: 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFER-NKLPGAIFTSFCGGAEIGQAIAKDPR 236
+ W + + V E KL I ++ ++ I +
Sbjct: 184 -------IFW--------LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI----K 224
Query: 237 ISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSV-LFAAVGT 295
+ + S + L + + CL +++ + V++ + A
Sbjct: 225 LRIHSIQAELRRLLK-----SKPYENCL---------LVLLN------VQNAKAWNAFN- 263
Query: 296 AGQRCTTCRRLLIHESIYQTVLDQL-VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG 354
+C+ LL + ++ V D L + + L E + K
Sbjct: 264 -----LSCKILLT--TRFKQVTDFLSAATTTHISLDHHSM------TLTPDEVKSLLLKY 310
Query: 355 IENIKSQGGKILTGGSVIESEGNFVQPT-IVEISPTADIVKEELFAPVLYVMKFQTFEEA 413
+ + + Q L P ++ +P + + A + T++
Sbjct: 311 L-DCRPQD---L--------------PREVLTTNPRR--LS--IIAESIRDGL-ATWDNW 347
Query: 414 VKIN-NSVPQGLSSSIFTRSPENI---FKWLG--PHGSDTGIVNVNIPT 456
+N + + + SS+ P F L P + +IPT
Sbjct: 348 KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP-------PSAHIPT 389
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 508 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.62 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 97.11 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-107 Score=857.68 Aligned_cols=470 Identities=29% Similarity=0.529 Sum_probs=441.4
Q ss_pred CCCceecCEEe--cCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010506 20 TPGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 20 ~~~~~i~g~~~--~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
+.++||||+|+ .++++++++||+||+++++++.++.+|+++|+++|++|++.|+.+|.++|.++|+++++.|++++++
T Consensus 6 ~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 85 (490)
T 2wme_A 6 EQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDE 85 (490)
T ss_dssp CBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46799999999 3678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhh-hHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHH
Q 010506 98 LGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 176 (508)
|+++++.|+|||+.+++. ++...++.++|++...+.+.++..+.. ++...+.+++|+|||++|+|||||+.+.+++++
T Consensus 86 la~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a 164 (490)
T 2wme_A 86 LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSA 164 (490)
T ss_dssp HHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEE-TTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccccc-CCcceeEEecceeEEEEeccccCcchhhhhhHH
Confidence 999999999999999986 699999999999998888776554433 455678899999999999999999999999999
Q ss_pred HHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH-
Q 010506 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ- 254 (508)
Q Consensus 177 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~- 254 (508)
+||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.++++.|++||+||+|+||||+.+|+.|++
T Consensus 165 ~ALaaGNtVVlKPse~tp~ta~~l~----~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 240 (490)
T 2wme_A 165 PALAAGNAMIFKPSEVTPLTALKLA----EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 240 (490)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHH----HHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCeEEEECCcCCHHHHHHHH----HHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHh
Confidence 9999999999999999999998775 556788999999999999 7889999999999999999999999998876
Q ss_pred HhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCC
Q 010506 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 255 ~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.+
T Consensus 241 ~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~ 320 (490)
T 2wme_A 241 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQD 320 (490)
T ss_dssp HHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCcc
Confidence 55667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEeCC
Q 010506 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~ 409 (508)
+++++||+++..+++++.++|++++++|+++++||...+ .+|+|++|||+ +++++|.+++||+||||++|++|+|
T Consensus 321 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 400 (490)
T 2wme_A 321 ENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD 400 (490)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESC
T ss_pred ccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCC
Confidence 999999999999999999999999999999999998743 36999999987 7999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhee
Q 010506 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489 (508)
Q Consensus 410 ~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k 489 (508)
+||||+++|+++|||++||||+|.+++++++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|
T Consensus 401 ~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~~-~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K 477 (490)
T 2wme_A 401 EDEAIRRANDTEYGLAAGVVTQDLARAHRAI--HRLEAGICWINTWGE-SPAEMPVGGYKQSGVGRENGLTTLAHYTRIK 477 (490)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCCSEEEESCCSC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEEcCCHHHHHHHH--HHCCeeEEEEeCCCC-CCCCCCcccccccccCchhHHHHHHHhhcee
Confidence 9999999999999999999999999999999 789999999998543 4567999999999999999999999999999
Q ss_pred EEEEeCCC
Q 010506 490 TCTINYGN 497 (508)
Q Consensus 490 ~v~~~~~~ 497 (508)
+|+++++.
T Consensus 478 ~v~i~~g~ 485 (490)
T 2wme_A 478 SVQVELGD 485 (490)
T ss_dssp EEEEECSC
T ss_pred EEEEECCC
Confidence 99999853
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-105 Score=842.10 Aligned_cols=491 Identities=59% Similarity=1.029 Sum_probs=461.1
Q ss_pred cchhhhhhhhcCCCCCCCCceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHH
Q 010506 4 AKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83 (508)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~ 83 (508)
..-++++|+.+. ...+++.||||+|+.++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++
T Consensus 8 ~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~ 86 (500)
T 2j6l_A 8 NQPQYAWLKELG-LREENEGVYNGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEI 86 (500)
T ss_dssp GSGGGGGGGGGT-CCSEEECEESSSEECCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred ccchhHHHHhcC-CCCCCCceECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHH
Confidence 345778999999 4578899999999976788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeC
Q 010506 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITA 163 (508)
Q Consensus 84 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 163 (508)
|+++++.|+++.++|+++++.|+|||..+++.|+...++.+++++...+.+.+...+...++...+..++|+|||++|+|
T Consensus 87 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P 166 (500)
T 2j6l_A 87 VRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITA 166 (500)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECC
Confidence 99999999999999999999999999999999999999999999988776655443333344455778999999999999
Q ss_pred CCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEe
Q 010506 164 FNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFT 243 (508)
Q Consensus 164 ~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ft 243 (508)
||||+.+.++++++||++||+||+|||+.+|+++..+++++.++|+++|+|+|++|+|+|+.+.++.|++||+||+|+||
T Consensus 167 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FT 246 (500)
T 2j6l_A 167 FNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFT 246 (500)
T ss_dssp SSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEE
T ss_pred CcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred CCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHh
Q 010506 244 GSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323 (508)
Q Consensus 244 Gs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~ 323 (508)
||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 247 GS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 326 (500)
T 2j6l_A 247 GSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKA 326 (500)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCccccccccccee
Q 010506 324 YKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVL 402 (508)
Q Consensus 324 ~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl 402 (508)
++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ ++++++.+++||+||||+
T Consensus 327 ~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 406 (500)
T 2j6l_A 327 YAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPIL 406 (500)
T ss_dssp HHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEE
T ss_pred hhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceE
Confidence 9999999999999999999999999999999999999999999999864457999999988 699999999999999999
Q ss_pred EeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHH
Q 010506 403 YVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW 482 (508)
Q Consensus 403 ~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~ 482 (508)
+|++|+|+||||+++|+++|||+++|||+|.++++++++..++++|+|+||+++....+.+||||+|.||+|+++|.+++
T Consensus 407 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~ 486 (500)
T 2j6l_A 407 YVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAW 486 (500)
T ss_dssp EEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGG
T ss_pred EEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHH
Confidence 99999999999999999999999999999999999998545699999999987655556889999999999999999999
Q ss_pred HHhhheeEEEEeC
Q 010506 483 KQYMRRSTCTINY 495 (508)
Q Consensus 483 ~~~~~~k~v~~~~ 495 (508)
++|++.|+|++++
T Consensus 487 ~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 487 KQYMRRSTCTINY 499 (500)
T ss_dssp GGGEEEEEEEEEC
T ss_pred HHhhceEEEEEeC
Confidence 9999999999874
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-104 Score=831.56 Aligned_cols=468 Identities=27% Similarity=0.479 Sum_probs=441.9
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
..++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++|++.|+.++.++|.++|+++++.|+++.++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999983 567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHH
Q 010506 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 177 (508)
|++++++|+|||+.+++.|+..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+.+.++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 171 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP 171 (484)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHH
Confidence 99999999999999999999999999999998877765554443334566788999999999999999999999999999
Q ss_pred HhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHh
Q 010506 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (508)
Q Consensus 178 ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (508)
||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||+|+||||+.+|+.|++.+
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~----~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~a 247 (484)
T 3ifg_A 172 ALAAGCPIVVKPAESTPFSALAMA----FLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQS 247 (484)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHH----HHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHH----HHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 999999999999999999998764 557889999999999999 678999999999999999999999999999999
Q ss_pred hhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCC
Q 010506 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (508)
Q Consensus 257 ~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 336 (508)
+++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.+++
T Consensus 248 a~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 248 APTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp GGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred hccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHH
Q 010506 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK 415 (508)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 415 (508)
+++||+++..+++++.+++++++++|+++++||...+.+|+|++|||+ +++++|++++||+||||++|++|+|+||||+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR 407 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999875557999999988 7999999999999999999999999999999
Q ss_pred HhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEe
Q 010506 416 INNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 416 ~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 494 (508)
++|+++|||+++|||+|.+++++++ .++++|+|+||+.. ...+.+||||+|.||+|+++|.+++++|++.|+|++.
T Consensus 408 ~aN~~~~GL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~-~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 408 LANDTEFGLAAYLYSRDIGRVWRVA--EALEYGMVGINTGL-ISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHCSSEESEEEEECCBHHHHHHHH--HHCCCSEEEESCSC-CCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEEcCCC-CCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999 78999999999864 3456899999999999999999999999999999875
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-103 Score=832.79 Aligned_cols=470 Identities=30% Similarity=0.494 Sum_probs=444.3
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHh--HHhccCChhHHHHHHHHHHHHHHHhH
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEAS--KIWMELPAPKRGEVVRQIGDALREKL 95 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
.+++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++|+ +.|+.++.++|.++|+++++.|+++.
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR 111 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhH
Confidence 567999999994 56899999999999999999999999999999999999 88999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHH
Q 010506 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 175 (508)
++|++++++|+|||+.+++.|+..+++.+++++...+.+.+...+...++...+..++|+|||++|+|||||+.+.++++
T Consensus 112 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 191 (520)
T 3ed6_A 112 EALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKI 191 (520)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999998877665544433245567889999999999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH
Q 010506 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (508)
++||++||+||+|||+.+|+++.+++ +++.++|+|+|++|+|+| +.+.++.|++||+||+|+||||+.+|+.|++
T Consensus 192 apALaaGNtVVlKPs~~tp~t~~~l~----~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~ 267 (520)
T 3ed6_A 192 APALATGCSLVMKPSEITPLTTIRVF----ELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMK 267 (520)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHH----HHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEEcCCcchHHHHHHH----HHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999998764 556789999999999999 7889999999999999999999999999999
Q ss_pred HhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCC
Q 010506 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 255 ~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|
T Consensus 268 ~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 268 NAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred HhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEeCC
Q 010506 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~ 409 (508)
+++++||+++..+++++.+++++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999998642 47999999988 6999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhee
Q 010506 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489 (508)
Q Consensus 410 ~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k 489 (508)
+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+.... .+.+||||+|.||+|+++|.+++++|++.|
T Consensus 428 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a--~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k 504 (520)
T 3ed6_A 428 EQEAIQLANDSIYGLAGAVFSKDIGKAQRVA--NKLKLGTVWINDFHPY-FAQAPWGGYKQSGIGRELGKEGLEEYLVSK 504 (520)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHH--HHSCCSEEEESCSCCC-CTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHH--HHCCcceEEECCCCCC-CCCCCcCCcCcCcCCccchHHHHHHhhceE
Confidence 9999999999999999999999999999999 7899999999997654 568999999999999999999999999999
Q ss_pred EEEEeCC
Q 010506 490 TCTINYG 496 (508)
Q Consensus 490 ~v~~~~~ 496 (508)
+|+++++
T Consensus 505 ~v~~~~~ 511 (520)
T 3ed6_A 505 HILTNTN 511 (520)
T ss_dssp EEEEESS
T ss_pred EEEEcCC
Confidence 9999985
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-103 Score=830.81 Aligned_cols=467 Identities=27% Similarity=0.479 Sum_probs=441.8
Q ss_pred CCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHH
Q 010506 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (508)
Q Consensus 21 ~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (508)
.++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++|
T Consensus 33 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 112 (504)
T 3ek1_A 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDI 112 (504)
T ss_dssp SSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999984 5679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHH
Q 010506 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (508)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 178 (508)
+++++.|+|||+.+++.|+...++.++|++...+...+...+...++...+..++|+|||++|+|||||+.+.++++++|
T Consensus 113 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~A 192 (504)
T 3ek1_A 113 ALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPA 192 (504)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999998877665544443445667889999999999999999999999999999
Q ss_pred hhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhh
Q 010506 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (508)
Q Consensus 179 LaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (508)
|++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|++.++
T Consensus 193 LaaGN~VVlKPs~~tp~t~~~l----~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 193 LAAGCTMIVRPADLTPLTALAL----GVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHTCEEEEECCTTSCHHHHHH----HHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHcCCEEEEECCCcChHHHHHH----HHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 9999999999999999999876 4567889999999999998 6789999999999999999999999999999999
Q ss_pred hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCC
Q 010506 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337 (508)
Q Consensus 258 ~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~ 337 (508)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++
T Consensus 269 ~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 348 (504)
T 3ek1_A 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGV 348 (504)
T ss_dssp GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHH
Q 010506 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKI 416 (508)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 416 (508)
++||+++.++++++.+++++++++|+++++||.. .+|+|++|||+ ++++++.+++||+||||++|++|+|+||||++
T Consensus 349 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 426 (504)
T 3ek1_A 349 VIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQ 426 (504)
T ss_dssp CBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999999999976 36999999987 79999999999999999999999999999999
Q ss_pred hccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeCC
Q 010506 417 NNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 417 ~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
+|+++|||+++|||+|.+++++++ .++++|+|+||++. ...+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 427 aN~~~~GL~a~v~t~d~~~a~~~a--~~l~aG~V~vN~~~-~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~g 503 (504)
T 3ek1_A 427 ANDTIFGLAAYFYTENFSRAIRVS--EALEYGMVGHNTGL-ISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503 (504)
T ss_dssp HHCSSCCSEEEEECCBHHHHHHHH--HHSCCSEEEESCSC-CCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEECC
T ss_pred HhCCCCCeEEEEEcCCHHHHHHHH--HhCCcCeEEECCCC-CCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEecC
Confidence 999999999999999999999999 78999999999865 345679999999999999999999999999999998764
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-103 Score=834.83 Aligned_cols=483 Identities=26% Similarity=0.418 Sum_probs=446.0
Q ss_pred hhhhcCCCCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHH
Q 010506 10 FLSEIGLSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQI 87 (508)
Q Consensus 10 ~~~~~~~~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~ 87 (508)
.=+|++++-..+++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++
T Consensus 16 ~~~~~~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 95 (521)
T 4e4g_A 16 ENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKF 95 (521)
T ss_dssp --------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred hhhhHhhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 3458888877889999999994 46799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCc
Q 010506 88 GDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFP 167 (508)
Q Consensus 88 a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 167 (508)
++.|++++++|+++++.|+|||+.+++.|+...++.+++++...+.+.+...+...++...+..++|+|||++|+|||||
T Consensus 96 a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P 175 (521)
T 4e4g_A 96 VQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFP 175 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCT
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcch
Confidence 99999999999999999999999999999999999999999887776654332222344677889999999999999999
Q ss_pred hhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHH
Q 010506 168 CAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTK 247 (508)
Q Consensus 168 ~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~ 247 (508)
+.+.++++++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+|+.+.++.|++||+||+|+||||+.
T Consensus 176 ~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~----~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~ 251 (521)
T 4e4g_A 176 GMIPMWMFAPAIACGNAFILKPSERDPSVPIRLA----ELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTP 251 (521)
T ss_dssp THHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHH----HHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHH----HHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHH
Confidence 9999999999999999999999999999998764 557889999999999999777889999999999999999999
Q ss_pred HHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecc-cHHHHHHHHHHhhhh
Q 010506 248 VGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHES-IYQTVLDQLVDVYKQ 326 (508)
Q Consensus 248 ~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~L~~~~~~ 326 (508)
+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +||+|+++|++++++
T Consensus 252 vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~ 331 (521)
T 4e4g_A 252 IARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVES 331 (521)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc----CCCCceeccEEE-ecCCCCcccccccccce
Q 010506 327 VKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI----ESEGNFVQPTIV-EISPTADIVKEELFAPV 401 (508)
Q Consensus 327 ~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~----~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPv 401 (508)
+++|+|.++++++||+++..+++++.+++++++++|+++++||... +.+|+|++|||+ +++++|++++||+||||
T Consensus 332 ~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 411 (521)
T 4e4g_A 332 LRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPV 411 (521)
T ss_dssp CCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred ccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcE
Confidence 9999999999999999999999999999999999999999999752 247999999988 79999999999999999
Q ss_pred eEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC--CcchH
Q 010506 402 LYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG--REAGS 479 (508)
Q Consensus 402 l~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g--~~~g~ 479 (508)
++|++|+|+||||+++|+++|||++||||+|.+++++++ .++++|+|+||+++....+.+||||+|.||+| +++|.
T Consensus 412 l~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~ 489 (521)
T 4e4g_A 412 LSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFA--SRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGT 489 (521)
T ss_dssp EEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHH--HHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHH
T ss_pred EEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHH--HhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchH
Confidence 999999999999999999999999999999999999999 78999999999986655567899999999999 78999
Q ss_pred HHHHHhhheeEEEEeCCCC
Q 010506 480 DSWKQYMRRSTCTINYGNE 498 (508)
Q Consensus 480 ~~~~~~~~~k~v~~~~~~~ 498 (508)
+++++|++.|+|+++++..
T Consensus 490 ~gl~~ft~~K~v~~~~~~~ 508 (521)
T 4e4g_A 490 DSIKFWTRTKTITSRWPSG 508 (521)
T ss_dssp HHHHHTEEEEEEEECCCCC
T ss_pred HHHHHhheEEEEEEecCcc
Confidence 9999999999999987654
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-103 Score=829.05 Aligned_cols=470 Identities=28% Similarity=0.474 Sum_probs=442.6
Q ss_pred CCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHH
Q 010506 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 19 ~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENRE 89 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4567899999994 56899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEE-eecceEEEEeCCCCchhhhHHHH
Q 010506 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETW-NPLGVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~~~l 175 (508)
+|+++++.|+|||+.+++.|+...++.+++++...+...+...+.. .+...+..+ +|+|||++|+|||||+.+.++++
T Consensus 90 ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 168 (506)
T 3rh9_A 90 EIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKL 168 (506)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeeEeecccceEEEEECCCchHHHHHHHHH
Confidence 9999999999999999999999999999999998887766544332 345667788 99999999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH
Q 010506 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (508)
++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|++
T Consensus 169 a~ALaaGN~VVlKps~~tp~t~~~l~----~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~ 244 (506)
T 3rh9_A 169 SAALAAGCPSVIKPASETPLTMIAFF----SVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIV 244 (506)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHH----HHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEEcCCccHHHHHHHH----HHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence 99999999999999999999998764 557789999999999999 6789999999999999999999999999999
Q ss_pred HhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCC
Q 010506 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 255 ~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 245 ~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 245 DTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp HTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred HhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC-CCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHH
Q 010506 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES-EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEE 412 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~-~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~e 412 (508)
+++++||+++.++++++.+++++++++|+++++||...+. .|+|++|||+ ++++++++++||+||||++|++|+|+||
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 404 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEE 404 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHH
Confidence 9999999999999999999999999999999999986554 7999999988 7999999999999999999999999999
Q ss_pred HHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010506 413 AVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 413 ai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 405 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~ 481 (506)
T 3rh9_A 405 VIDAGNDTEFGLASYVFTADAERAQRVA--AGLRFGHVGWNTGTGP-TPEAPFGGMKASGIGREGGLEGLFEFVEAQTVP 481 (506)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHH--HHCCCSEEEESCCCCC-CTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEE
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcceEEEcCCCCC-CCCCCccCcCcCcCCcCccHHHHHHhcceEEEE
Confidence 9999999999999999999999999999 7899999999997653 467999999999999999999999999999998
Q ss_pred EeCC
Q 010506 493 INYG 496 (508)
Q Consensus 493 ~~~~ 496 (508)
++..
T Consensus 482 ~~~~ 485 (506)
T 3rh9_A 482 RGFA 485 (506)
T ss_dssp EC--
T ss_pred EcCc
Confidence 8753
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-103 Score=829.66 Aligned_cols=469 Identities=25% Similarity=0.416 Sum_probs=441.4
Q ss_pred CCCCceecCEEecCCC-eEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010506 19 ETPGCFVNGKWKAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 19 ~~~~~~i~g~~~~~~~-~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
...++||||+|+.+.. +++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++.++
T Consensus 24 ~~~~~~I~G~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 103 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADE 103 (498)
T ss_dssp CCCCEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cccCeeECCEEeeCCCCeEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4567999999995333 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhh-hhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHH
Q 010506 98 LGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 176 (508)
|+++++.|+|||..++ +.|+...++.+++++...+.+.+...+...++...+..++|+|||++|+|||||+.+.+++++
T Consensus 104 la~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 183 (498)
T 4f3x_A 104 FAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLA 183 (498)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHHH
Confidence 9999999999999999 889999999999999988776554433223455678899999999999999999999999999
Q ss_pred HHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHH
Q 010506 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (508)
Q Consensus 177 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (508)
+||++||+||+|||+.+|+++..+++ ++.++ +|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|++.
T Consensus 184 ~ALaaGNtVVlKPs~~tp~t~~~l~~----l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~ 258 (498)
T 4f3x_A 184 PAIGGGNTVVFKPSEQTPLTALKLAR----LIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAA 258 (498)
T ss_dssp HHHHTTCEEEEECCTTCCHHHHHHHH----HHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCeEEEECCcccHHHHHHHHH----HHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999988754 56777 99999999999 77899999999999999999999999999999
Q ss_pred hhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCC
Q 010506 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEK 335 (508)
Q Consensus 256 a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~ 335 (508)
++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 259 aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~ 338 (498)
T 4f3x_A 259 AAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDT 338 (498)
T ss_dssp HHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGG
T ss_pred HHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHHHHHHHHHHHHHCCC-eEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHH
Q 010506 336 GTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (508)
Q Consensus 336 ~~~~gpl~~~~~~~~~~~~v~~a~~~ga-~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 413 (508)
++++||+++..+++++.+++++++++|+ ++++||...+.+|+|++|||+ ++++++.+++||+||||++|++|+|+|||
T Consensus 339 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 418 (498)
T 4f3x_A 339 ENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDA 418 (498)
T ss_dssp GCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCH
T ss_pred cCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHH
Confidence 9999999999999999999999999999 999999875568999999988 78999999999999999999999999999
Q ss_pred HHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010506 414 VKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 414 i~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
|+++|+++|||+++|||+|.+++++++ .++++|+|+||+++... +.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 419 i~~aN~~~~GL~a~v~t~d~~~a~~~a--~~l~aG~V~vN~~~~~~-~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~ 495 (498)
T 4f3x_A 419 VAWANDSDYGLASSVWTKDISKAMRAA--SRLQYGCTWINTHFMLT-NEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMI 495 (498)
T ss_dssp HHHHHSSSCCSEEEEECSBHHHHHHHH--HHCCSSEEEESCCSCCC-TTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHhcCCCCceEEEECCCHHHHHHHH--HhCCcceEEEcCCCCCC-CCCCcCCcCcCCcCccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999 78999999999976543 789999999999999999999999999999998
Q ss_pred eC
Q 010506 494 NY 495 (508)
Q Consensus 494 ~~ 495 (508)
++
T Consensus 496 ~~ 497 (498)
T 4f3x_A 496 NH 497 (498)
T ss_dssp EC
T ss_pred eC
Confidence 75
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-103 Score=823.56 Aligned_cols=467 Identities=30% Similarity=0.501 Sum_probs=434.0
Q ss_pred ceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHH
Q 010506 23 CFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLL 102 (508)
Q Consensus 23 ~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~ 102 (508)
+||||+|+.+++ ++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++|++++
T Consensus 2 ~~I~G~~~~~~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~ 80 (486)
T 3pqa_A 2 MFIDGKWINRED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKIL 80 (486)
T ss_dssp -------CCCCC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred eeECCEEecCCC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999997667 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcC
Q 010506 103 SIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCG 182 (508)
Q Consensus 103 ~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaG 182 (508)
+.|+|||..+++.|+...++.+++++...+.+.+...+. ++...+..++|+|||++|+|||||+.+.++++++||++|
T Consensus 81 ~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaG 158 (486)
T 3pqa_A 81 AIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATG 158 (486)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC--TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC--CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999887765544332 245678899999999999999999999999999999999
Q ss_pred CEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccC
Q 010506 183 NCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261 (508)
Q Consensus 183 N~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~ 261 (508)
|+||+|||+.+|+++..+++++.++++++|+|+|++|+|+| +.++++.|++||+||+|+||||+.+|+.|++.++ ++
T Consensus 159 N~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~ 236 (486)
T 3pqa_A 159 NVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FK 236 (486)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SS
T ss_pred CEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CC
Confidence 99999999999999999999999999999999999999999 6778999999999999999999999999999987 89
Q ss_pred ceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCC
Q 010506 262 KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGP 341 (508)
Q Consensus 262 ~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gp 341 (508)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||
T Consensus 237 ~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 316 (486)
T 3pqa_A 237 KIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGP 316 (486)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCC
T ss_pred ceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCC
Q 010506 342 LHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVP 421 (508)
Q Consensus 342 l~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 421 (508)
+++..+++++.+++++++++|+++++||.. .|+|++|||++++++|++++||+||||++|++|+| ||||+++|+++
T Consensus 317 li~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~ 392 (486)
T 3pqa_A 317 LISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTILEVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTE 392 (486)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSS
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEEeCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCC
Confidence 999999999999999999999999999975 58999999889999999999999999999999999 99999999999
Q ss_pred CCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeCCCCCC
Q 010506 422 QGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGNELP 500 (508)
Q Consensus 422 ~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~~~~ 500 (508)
|||+++|||+|.+++++++ .++++|+|+||+++......+||||+|.||+|+++|.+++++|++.|+|++++....+
T Consensus 393 ~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~~~~~ 469 (486)
T 3pqa_A 393 YGLHSAIFTNDINKSLKFA--ENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAENLY 469 (486)
T ss_dssp CCSEEEEECSBHHHHHHHH--HHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC-----
T ss_pred CCcEEEEECCCHHHHHHHH--HhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCCccCC
Confidence 9999999999999999999 7899999999997654445789999999999999999999999999999998765544
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-103 Score=828.38 Aligned_cols=475 Identities=28% Similarity=0.490 Sum_probs=444.4
Q ss_pred CCCCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHH
Q 010506 15 GLSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALR 92 (508)
Q Consensus 15 ~~~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~ 92 (508)
..+..++++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+
T Consensus 7 ~~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~ 86 (497)
T 3k2w_A 7 DLHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIR 86 (497)
T ss_dssp CCCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred cccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 34456778999999994 4679999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhH
Q 010506 93 EKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (508)
Q Consensus 93 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 172 (508)
++.++|+++++.|+|||..+++.|+...++.+++++...+...+...+....+...+..++|+|||++|+|||||+.+.+
T Consensus 87 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 166 (497)
T 3k2w_A 87 ENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAG 166 (497)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHH
Confidence 99999999999999999999999999999999999988877665544333345567888999999999999999999999
Q ss_pred HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHH
Q 010506 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (508)
Q Consensus 173 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (508)
+++++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||+|+||||+.+|+.
T Consensus 167 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~----~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~ 242 (497)
T 3k2w_A 167 RKIGPALITGNTMVLKPTQETPLATTELG----RIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQ 242 (497)
T ss_dssp HHHHHHHHTTCEEEEECCSSSCHHHHHHH----HHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCChHHHHHHH----HHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHH
Confidence 99999999999999999999999998764 557889999999999999 7789999999999999999999999999
Q ss_pred HHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCC
Q 010506 252 VQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (508)
Q Consensus 252 i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 331 (508)
|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 243 i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~ 322 (497)
T 3k2w_A 243 IYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGD 322 (497)
T ss_dssp HHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcc--cCC--CCceeccEEE-ecCCCCcccccccccceeEeEE
Q 010506 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV--IES--EGNFVQPTIV-EISPTADIVKEELFAPVLYVMK 406 (508)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~--~~~--~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~ 406 (508)
|.++++++||+++.++++++.+++++++++|+++++||.. .+. +|+|++|||+ ++++++++++||+||||++|++
T Consensus 323 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (497)
T 3k2w_A 323 PMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVK 402 (497)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEE
Confidence 9999999999999999999999999999999999999973 233 7999999988 7999999999999999999999
Q ss_pred eCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhh
Q 010506 407 FQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486 (508)
Q Consensus 407 ~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~ 486 (508)
|+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++|+
T Consensus 403 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~-~~~~PfGG~k~SG~G~~~G~~gl~~ft 479 (497)
T 3k2w_A 403 VSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAI--SDLEVGEVYINRGMGE-QHQGFHNGWKQSGFGGEDGKFGLEQYL 479 (497)
T ss_dssp ESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHH--HHCCSSEEEESCCSCC-CTTSCBCCEETSEESCBSHHHHHHTTE
T ss_pred eCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHH--HhCCeeEEEEcCCCCC-CCCCCcCCcCCCcCCccchHHHHHHhc
Confidence 9999999999999999999999999999999999 7899999999997654 468999999999999999999999999
Q ss_pred heeEEEEeCC
Q 010506 487 RRSTCTINYG 496 (508)
Q Consensus 487 ~~k~v~~~~~ 496 (508)
+.|+|+++++
T Consensus 480 ~~k~v~~~~~ 489 (497)
T 3k2w_A 480 EKKTVYINEA 489 (497)
T ss_dssp EEEEEEEECC
T ss_pred ceEEEEEEcc
Confidence 9999999875
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-102 Score=828.17 Aligned_cols=475 Identities=28% Similarity=0.480 Sum_probs=445.9
Q ss_pred CCCCceecCEEec--CCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHh--HHhccCChhHHHHHHHHHHHHHHH
Q 010506 19 ETPGCFVNGKWKA--HGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEAS--KIWMELPAPKRGEVVRQIGDALRE 93 (508)
Q Consensus 19 ~~~~~~i~g~~~~--~~~~~~v~~P~~-g~~i~~v~~~~~~~v~~al~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~ 93 (508)
..+++||||+|+. ++++++++||+| |+++++++.++.+|+++++++|++|+ ..|+.++.++|.++|+++++.|++
T Consensus 21 ~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3u4j_A 21 SRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILA 100 (528)
T ss_dssp CBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHH
Confidence 3567999999994 467999999999 99999999999999999999999999 789999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHH
Q 010506 94 KLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (508)
Q Consensus 94 ~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 173 (508)
+.++|+++++.|+|||..+++.|+...++.+++++...+...+...+....+...+..++|+|||++|+|||||+.+.++
T Consensus 101 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 101 RQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence 99999999999999999999999999999999999988776654444332455678899999999999999999999999
Q ss_pred HHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHH
Q 010506 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (508)
Q Consensus 174 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (508)
++++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~----~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 256 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLA----ELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKL 256 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHH----HHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCccHHHHHHHH----HHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHH
Confidence 9999999999999999999999998775 456788999999999999 78899999999999999999999999999
Q ss_pred HHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCC
Q 010506 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (508)
Q Consensus 253 ~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p 332 (508)
++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 257 ~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 336 (528)
T 3u4j_A 257 GEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDP 336 (528)
T ss_dssp HHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECT
T ss_pred HHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC-CCceeccEEE-ecCCCCcccccccccceeEeEEeCCH
Q 010506 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES-EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~-~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
.++++++||+++.++++++.+++++++++|+++++||...+. +|+|++|||+ ++++++++++||+||||++|++|+|+
T Consensus 337 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 416 (528)
T 3u4j_A 337 LNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTA 416 (528)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCH
Confidence 999999999999999999999999999999999999987544 7999999988 78999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeE
Q 010506 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~ 490 (508)
||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 417 deAi~~aN~~~~GL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~ 493 (528)
T 3u4j_A 417 DEAVALANATEFGLSASVWSTNLETALQTI--RRIRAGRCWINSVID-GTPELPIGGYKKSGLGRELGRYGFDEYSQFKG 493 (528)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCCSEEEESCCSC-CCTTSCBCCSGGGEESCBSTTHHHHHTEEEEE
T ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHH--HhCCeeEEEECCCCC-CCCCCCcCCcCcCCCCcCchHHHHHHhhceEE
Confidence 999999999999999999999999999999 789999999999754 35689999999999999999999999999999
Q ss_pred EEEeCCCCCC
Q 010506 491 CTINYGNELP 500 (508)
Q Consensus 491 v~~~~~~~~~ 500 (508)
|+++++...+
T Consensus 494 v~~~~~~~~~ 503 (528)
T 3u4j_A 494 VHVTLGRPAP 503 (528)
T ss_dssp EEEESSCCCC
T ss_pred EEEeCCCCCC
Confidence 9999864333
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-102 Score=823.56 Aligned_cols=474 Identities=30% Similarity=0.497 Sum_probs=443.1
Q ss_pred CCCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH-----HhccCChhHHHHHHHHHH
Q 010506 16 LSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-----IWMELPAPKRGEVVRQIG 88 (508)
Q Consensus 16 ~~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~-----~w~~~~~~~R~~~L~~~a 88 (508)
++....++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++
T Consensus 3 ~~~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a 82 (503)
T 3iwj_A 3 IPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIA 82 (503)
T ss_dssp -CCCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHH
T ss_pred CCCCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHH
Confidence 4456778999999983 567899999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcc---cCCCCCceeEEEEeecceEEEEeCCC
Q 010506 89 DALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI---PSERPNHMMLETWNPLGVVGVITAFN 165 (508)
Q Consensus 89 ~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~GVv~~i~p~n 165 (508)
+.|++++++|++++++|+|||+.+++.|+..+++.+++++...+.+.+... .....+...+..++|+|||++|+|||
T Consensus 83 ~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 162 (503)
T 3iwj_A 83 AKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWN 162 (503)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCc
Confidence 999999999999999999999999999999999999999988776544321 11123446788999999999999999
Q ss_pred CchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeC
Q 010506 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244 (508)
Q Consensus 166 ~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftG 244 (508)
||+.+.++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||+||.|+|||
T Consensus 163 ~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTG 238 (503)
T 3iwj_A 163 YPMLMATWKVAPALAAGCAAILKPSELASLTCLEL----GEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTG 238 (503)
T ss_dssp SHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEES
T ss_pred hHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHH----HHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEEC
Confidence 99999999999999999999999999999999876 4557889999999999999 668999999999999999999
Q ss_pred CHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhh
Q 010506 245 STKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVY 324 (508)
Q Consensus 245 s~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~ 324 (508)
|+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 239 S~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 318 (503)
T 3iwj_A 239 SSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWI 318 (503)
T ss_dssp CHHHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceeccEEE-ecCCCCcccccccccce
Q 010506 325 KQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPV 401 (508)
Q Consensus 325 ~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPv 401 (508)
+++++|||.++++++||+++.++++++.+++++++++|+++++||...+ ..|+|++|||+ +++++|.+++||+||||
T Consensus 319 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 398 (503)
T 3iwj_A 319 KNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPV 398 (503)
T ss_dssp HTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred HhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCce
Confidence 9999999999999999999999999999999999999999999998644 57999999988 79999999999999999
Q ss_pred eEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHH
Q 010506 402 LYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDS 481 (508)
Q Consensus 402 l~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~ 481 (508)
++|++|+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.++
T Consensus 399 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~~-~~~~~PfGG~k~SG~G~~~G~~g 475 (503)
T 3iwj_A 399 LCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVT--KAFKAGIVWVNCSQP-CFTQAPWGGVKRSGFGRELGEWG 475 (503)
T ss_dssp EEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHH--HHCCSSEEEESSSCC-CCTTSCBCCSGGGEECCBSHHHH
T ss_pred EEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHH--HhCCcceEEEcCCCC-CCCCCCcCCcCcccCCCcchHHH
Confidence 999999999999999999999999999999999999999 789999999998643 45679999999999999999999
Q ss_pred HHHhhheeEEEEeCC
Q 010506 482 WKQYMRRSTCTINYG 496 (508)
Q Consensus 482 ~~~~~~~k~v~~~~~ 496 (508)
+++|++.|+|+++++
T Consensus 476 ~~~f~~~k~v~~~~~ 490 (503)
T 3iwj_A 476 LDNYLSVKQVTQYIS 490 (503)
T ss_dssp HHTTEEEEEEEEECC
T ss_pred HHHhhCeEEEEEeCC
Confidence 999999999999875
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-102 Score=824.73 Aligned_cols=468 Identities=26% Similarity=0.509 Sum_probs=438.5
Q ss_pred CCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhccCChhHHHHHHHHHHHHHHHhHH
Q 010506 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 21 ~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
.++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+++.+
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999994 467899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCC---CCCceeEEEEeecceEEEEeCCCCchhhhH
Q 010506 97 HLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSE---RPNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 172 (508)
+|+++++.|+|||+.+++ .|+..+++.++|++...+.+.+...+.. ..+...+..++|+|||++|+|||||+..++
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 999999999999999998 8999999999999988877655433321 122256788999999999999999999999
Q ss_pred HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHH
Q 010506 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (508)
Q Consensus 173 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (508)
+++++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.+++|++||+||+|+||||+.+|+.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~----~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~ 272 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFA----ELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHH----HHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHH----HHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHH
Confidence 99999999999999999999999998774 556789999999999999 6788999999999999999999999999
Q ss_pred HHHHhh-hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccC
Q 010506 252 VQQTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (508)
Q Consensus 252 i~~~a~-~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g 330 (508)
|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 273 I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG 352 (517)
T 2o2p_A 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352 (517)
T ss_dssp HHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred HHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCC
Confidence 999999 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCC
Q 010506 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (508)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~ 409 (508)
||.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 353 dp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 432 (517)
T 2o2p_A 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFAD 432 (517)
T ss_dssp CTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECT
T ss_pred CCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCC
Confidence 999999999999999999999999999999999999999864446999999987 7999999999999999999999999
Q ss_pred --HHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhh
Q 010506 410 --FEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487 (508)
Q Consensus 410 --~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~ 487 (508)
+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++
T Consensus 433 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~ 509 (517)
T 2o2p_A 433 GDVDAVLSRANATEFGLASGVFTRDINKALYVS--DKLQAGTVFINTYNK-TDVAAPFGGFKQSGFGKDLGEAALNEYLR 509 (517)
T ss_dssp TCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHH--HHCCSSEEEESCSSC-CCTTSCBCCCGGGEECCBSHHHHHHTTEE
T ss_pred CCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHH--HhcCEeEEEECCCCC-CCCCCCcCCcCcCCcCccChHHHHHHhCC
Confidence 9999999999999999999999999999999 789999999998643 34679999999999999999999999999
Q ss_pred eeEEEEeC
Q 010506 488 RSTCTINY 495 (508)
Q Consensus 488 ~k~v~~~~ 495 (508)
.|+|++++
T Consensus 510 ~k~v~~~~ 517 (517)
T 2o2p_A 510 IKTVTFEY 517 (517)
T ss_dssp EEEEEEEC
T ss_pred ceEEEeeC
Confidence 99998864
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-102 Score=822.61 Aligned_cols=471 Identities=27% Similarity=0.468 Sum_probs=438.2
Q ss_pred CCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHH
Q 010506 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 19 ~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
...++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.+
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKE 89 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4457899999994 45789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCC-C----CceeEEEEeecceEEEEeCCCCchhhh
Q 010506 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER-P----NHMMLETWNPLGVVGVITAFNFPCAVL 171 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~P~GVv~~i~p~n~P~~~~ 171 (508)
+|+++++.|+|||..+++.|+..+++.+++++...+...+...+... + +...+..++|+|||++|+|||||+.+.
T Consensus 90 ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 90 IIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 99999999999999999999999999999999888776554332211 2 345678899999999999999999999
Q ss_pred HHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHH
Q 010506 172 GWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGL 250 (508)
Q Consensus 172 ~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~ 250 (508)
++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l----~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~ 245 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKM----VEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGE 245 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHH----HHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHH
Confidence 99999999999999999999999999876 5667899999999999999 678999999999999999999999999
Q ss_pred HHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccC
Q 010506 251 MVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (508)
Q Consensus 251 ~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g 330 (508)
.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 246 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 246 RISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 9999988 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCC
Q 010506 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (508)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~ 409 (508)
||. +++++||+++.++++++.+++++++++|+++++||.. .|+|++|||+ ++++++++++||+||||++|++|+|
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~ 399 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKD 399 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCC
Confidence 999 9999999999999999999999999999999999974 6899999988 6999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhee
Q 010506 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489 (508)
Q Consensus 410 ~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k 489 (508)
+||||+++|+++|||++||||+|.+++++++ .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|
T Consensus 400 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k 477 (505)
T 3prl_A 400 ANEAISLSNQSDYGLQASIFTKDTDRAINIG--KHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRER 477 (505)
T ss_dssp HHHHHHHHHTSSEESEEEEECSCHHHHHHHH--HTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEE
T ss_pred HHHHHHHHhCCCCCeEEEEEcCCHHHHHHHH--HHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceE
Confidence 9999999999999999999999999999999 78999999999976655678999999999999999999999999999
Q ss_pred EEEEeCCCCCCC
Q 010506 490 TCTINYGNELPL 501 (508)
Q Consensus 490 ~v~~~~~~~~~~ 501 (508)
+|+++++...++
T Consensus 478 ~v~~~~~~~~~~ 489 (505)
T 3prl_A 478 VTVLNLAENLYF 489 (505)
T ss_dssp EEEEEC------
T ss_pred EEEEeCCCcccC
Confidence 999998776654
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-102 Score=821.19 Aligned_cols=473 Identities=26% Similarity=0.463 Sum_probs=443.2
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++
T Consensus 26 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (515)
T 2d4e_A 26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADE 105 (515)
T ss_dssp CBCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456899999994 457899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHH
Q 010506 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 177 (508)
|+++++.|+|||+.+++.|+..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+.+.++++++
T Consensus 106 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 185 (515)
T 2d4e_A 106 LAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAP 185 (515)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhH
Confidence 99999999999999999999999999999999887766544333233445678999999999999999999999999999
Q ss_pred HhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHh
Q 010506 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (508)
Q Consensus 178 ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (508)
||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||+|+||||+.+|+.|++.+
T Consensus 186 ALaaGN~VVlKps~~tp~t~~~l~----~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~a 261 (515)
T 2d4e_A 186 ALAFGNTVVLKPAEWSPFTATKLA----EILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNA 261 (515)
T ss_dssp HHHTTCCEEEECCTTSCHHHHHHH----HHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCeeeecCCCCcHHHHHHHH----HHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHH
Confidence 999999999999999999998774 556789999999999999 678899999999999999999999999999999
Q ss_pred hhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCC
Q 010506 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (508)
Q Consensus 257 ~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 336 (508)
+++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 262 a~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 341 (515)
T 2d4e_A 262 ADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPE 341 (515)
T ss_dssp GGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred hhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--------CCCceeccEEE-ecCCCCcccccccccceeEeEEe
Q 010506 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--------SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (508)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~--------~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~ 407 (508)
+++||+++.++++++.+++++++++|+++++||...+ ..|+|++|||+ + +++|.+++||+||||++|++|
T Consensus 342 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~ 420 (515)
T 2d4e_A 342 TEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPF 420 (515)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEE
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEee
Confidence 9999999999999999999999999999999997633 26999999987 6 889999999999999999999
Q ss_pred CCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhh
Q 010506 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487 (508)
Q Consensus 408 ~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~ 487 (508)
+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++|++
T Consensus 421 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~ 497 (515)
T 2d4e_A 421 KDEEEALRKANDTKYGLAAYVFTRDLERAHRLA--LELEAGMVYLNSHNV-RHLPTPFGGVKGSGDRREGGTYALDFYTD 497 (515)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCSSEEEESSSCC-CCTTSCBCCSGGGBCSCBSHHHHHHHHEE
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH--HhCCeeEEEECCCCC-CCCCCCCCCcCCCCCCccchHHHHHHhCc
Confidence 999999999999999999999999999999999 789999999998654 45679999999999999999999999999
Q ss_pred eeEEEEeCCCCCC
Q 010506 488 RSTCTINYGNELP 500 (508)
Q Consensus 488 ~k~v~~~~~~~~~ 500 (508)
.|+|+++++.+.|
T Consensus 498 ~K~v~~~~~~~~~ 510 (515)
T 2d4e_A 498 LKTIALPLRPPHV 510 (515)
T ss_dssp EEEEEEESSCCCC
T ss_pred eeEEEEcCCCCCC
Confidence 9999999876666
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-102 Score=816.22 Aligned_cols=469 Identities=28% Similarity=0.528 Sum_probs=441.8
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999994 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHH
Q 010506 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 177 (508)
|+++++.|+|||..+++.|+..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+.+.++++++
T Consensus 89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 168 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 168 (481)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999998876655544443334556788999999999999999999999999999
Q ss_pred HhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHh
Q 010506 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (508)
Q Consensus 178 ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (508)
||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|++.+
T Consensus 169 ALaaGN~VVlKps~~tp~~~~~l~----~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~a 244 (481)
T 3jz4_A 169 ALAAGCTMVLKPASQTPFSALALA----ELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQC 244 (481)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHH----HHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCCCcHHHHHHH----HHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999998764 557888999999999999 788999999999999999999999999999999
Q ss_pred hhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCC
Q 010506 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (508)
Q Consensus 257 ~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 336 (508)
+++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 245 a~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 245 AKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp TTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred hhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHH
Q 010506 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK 415 (508)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 415 (508)
+++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ ++++++.+++||+||||++|++|+|+||||+
T Consensus 325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 404 (481)
T 3jz4_A 325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIA 404 (481)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHH
Confidence 999999999999999999999999999999999875557899999988 7999999999999999999999999999999
Q ss_pred HhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010506 416 INNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 416 ~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
++|+++|||+++|||+|.+++++++ .++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++|++.|+|++.+
T Consensus 405 ~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~~ 481 (481)
T 3jz4_A 405 QANDTEFGLAAYFYARDLSRVFRVG--EALEYGIVGINTGII-SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481 (481)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHH--HHCCCSEEEESCSCC-CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHhcCCCCceEEEECCCHHHHHHHH--HhCCeeeEEECCCCC-CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEeC
Confidence 9999999999999999999999999 789999999999654 4567999999999999999999999999999998753
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-102 Score=825.32 Aligned_cols=475 Identities=29% Similarity=0.478 Sum_probs=443.4
Q ss_pred CCCCCceecCEEecCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHH
Q 010506 18 PETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 18 ~~~~~~~i~g~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
+.++++||||+|+.++.+++++||+| |+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++++
T Consensus 35 ~~~~~~~I~G~~~~~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (538)
T 3qan_A 35 GKEYPLIINGERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKH 114 (538)
T ss_dssp TEEECEEETTEEECCSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CcccceeECCEEecCCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34678999999998788999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhh-hhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHH
Q 010506 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGL-SRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 175 (508)
+|+++++.|+|||..+++.|+..+++.+++++.. .+...+...+.. .+...+..++|+|||++|+|||||+.+.++++
T Consensus 115 ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 193 (538)
T 3qan_A 115 EFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSR-PGEQNRYFYTPMGVTVTISPWNFALAIMVGTA 193 (538)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-TTEEEEEEEEECCEEEEECCSTTTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccc-CCcceeeecCCCcEEEEECCCchHHHHHHHHH
Confidence 9999999999999999999999999999999988 666665544432 35567889999999999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH
Q 010506 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (508)
++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|++
T Consensus 194 a~ALaaGN~VVlKps~~tp~ta~~l----~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 269 (538)
T 3qan_A 194 VAPIVTGNTVVLKPASTTPVVAAKF----VEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYE 269 (538)
T ss_dssp HHHHHTTCEEEEECCTTSHHHHHHH----HHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCccHHHHHHH----HHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999876 4567889999999999999 7789999999999999999999999999999
Q ss_pred Hhhhc------cCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcc
Q 010506 255 TVHQR------FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328 (508)
Q Consensus 255 ~a~~~------~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~ 328 (508)
.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 270 ~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 349 (538)
T 3qan_A 270 RAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLT 349 (538)
T ss_dssp HHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCC
T ss_pred HhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhcc
Confidence 99988 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEe
Q 010506 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (508)
Q Consensus 329 ~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~ 407 (508)
+|||.++++++||+++..+++++.+++++++++| ++++||...+..|+|++|||+ ++++++++++||+||||++|++|
T Consensus 350 vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 428 (538)
T 3qan_A 350 VGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKA 428 (538)
T ss_dssp BSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEe
Confidence 9999999999999999999999999999999999 999999875447999999988 78999999999999999999999
Q ss_pred CCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEc-CCCCCCCCCCCccCCCCCCCC-CcchHHHHHHh
Q 010506 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVN-IPTNGAEIGGAFGGEKATGGG-REAGSDSWKQY 485 (508)
Q Consensus 408 ~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN-~~~~~~~~~~pfGG~~~SG~g-~~~g~~~~~~~ 485 (508)
+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+|| ..+....+.+||||+|.||+| +++|.+++++|
T Consensus 429 ~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~f 506 (538)
T 3qan_A 429 NDFDHALEIANNTEYGLTGAVITRNRAHIEQAK--REFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALH 506 (538)
T ss_dssp SSHHHHHHHHHCSSEESEEEEECSCHHHHHHHH--HHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGG
T ss_pred CCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHH--HhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHh
Confidence 999999999999999999999999999999999 78999999999 554444678999999999999 99999999999
Q ss_pred hheeEEEEeCCCCCC
Q 010506 486 MRRSTCTINYGNELP 500 (508)
Q Consensus 486 ~~~k~v~~~~~~~~~ 500 (508)
++.|+|++++....+
T Consensus 507 t~~k~v~~~~~~~~~ 521 (538)
T 3qan_A 507 MQAKTVSEMYAENLY 521 (538)
T ss_dssp EEEEEEEEEC-----
T ss_pred hCeEEEEEecCCccc
Confidence 999999998865443
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-102 Score=816.88 Aligned_cols=471 Identities=28% Similarity=0.503 Sum_probs=440.7
Q ss_pred CCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHh
Q 010506 17 SPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREK 94 (508)
Q Consensus 17 ~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
....+++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++
T Consensus 3 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 82 (479)
T 2imp_A 3 VPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRER 82 (479)
T ss_dssp CCEECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CCcccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 345667899999994 457899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHH
Q 010506 95 LHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 174 (508)
+++|+++++.|+|||+.+++.|+..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+.+.+++
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 83 ASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 99999999999999999999999999999999998877665544333223446678899999999999999999999999
Q ss_pred HHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHH
Q 010506 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (508)
Q Consensus 175 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (508)
+++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|+
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~----~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 238 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFA----KIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 238 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHH----HHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHH----HHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 999999999999999999999998775 456789999999999999 567899999999999999999999999999
Q ss_pred HHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCC
Q 010506 254 QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (508)
Q Consensus 254 ~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~ 333 (508)
+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 239 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 318 (479)
T 2imp_A 239 ATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA 318 (479)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHH
Q 010506 334 E-KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (508)
Q Consensus 334 ~-~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ 411 (508)
+ +++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ ++++++++++||+||||++|++|+|+|
T Consensus 319 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~ 398 (479)
T 2imp_A 319 ERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLE 398 (479)
T ss_dssp TCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHH
T ss_pred ccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHH
Confidence 9 99999999999999999999999999999999999764446999999987 799999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 412 EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 412 eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 399 eAi~~aN~~~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v 475 (479)
T 2imp_A 399 DAISMANDSDYGLTSSIYTQNLNVAMKAI--KGLKFGETYINRENFE-AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475 (479)
T ss_dssp HHHHHHHCSSEESEEEEECCCHHHHHHHH--HHCCSSEEEESSCCCC-CTTSCBCCEETTEESCBSHHHHHHTTEEEEEE
T ss_pred HHHHHHhcCCCCeeEEEECCCHHHHHHHH--HhCCEeEEEECCCCCC-CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEE
Confidence 99999999999999999999999999999 7899999999987654 56899999999999999999999999999999
Q ss_pred EEe
Q 010506 492 TIN 494 (508)
Q Consensus 492 ~~~ 494 (508)
+++
T Consensus 476 ~~~ 478 (479)
T 2imp_A 476 YLQ 478 (479)
T ss_dssp EEE
T ss_pred Eec
Confidence 874
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-101 Score=815.78 Aligned_cols=470 Identities=29% Similarity=0.510 Sum_probs=439.9
Q ss_pred CCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH---HhccCChhHHHHHHHHHHHHHHH
Q 010506 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK---IWMELPAPKRGEVVRQIGDALRE 93 (508)
Q Consensus 19 ~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~ 93 (508)
...++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++
T Consensus 19 ~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (501)
T 1bxs_A 19 KYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIER 98 (501)
T ss_dssp CCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred cccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHH
Confidence 3456899999994 367899999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhH
Q 010506 94 KLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (508)
Q Consensus 94 ~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 172 (508)
+.++|++++++|+|||+.++. .|+...++.+++++...+.+.+...+. ..+...+..++|+|||++|+|||||+.+.+
T Consensus 99 ~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 177 (501)
T 1bxs_A 99 DRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFL 177 (501)
T ss_dssp THHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHH
Confidence 999999999999999999875 799999999999998887765543332 234456788999999999999999999999
Q ss_pred HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHH
Q 010506 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (508)
Q Consensus 173 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (508)
+++++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.
T Consensus 178 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~----~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~ 253 (501)
T 1bxs_A 178 WKIGPALSCGNTVVVKPAEQTPLTALHMG----SLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKL 253 (501)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHH----HHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCeeeccCCCccHHHHHHHH----HHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 99999999999999999999999998764 557889999999999999 7889999999999999999999999999
Q ss_pred HHHHhh-hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccC
Q 010506 252 VQQTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (508)
Q Consensus 252 i~~~a~-~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g 330 (508)
|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 254 i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 333 (501)
T 1bxs_A 254 IKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLG 333 (501)
T ss_dssp HHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBS
T ss_pred HHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCC
Confidence 999999 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCC
Q 010506 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (508)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~ 409 (508)
||.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ ++++++.+++||+||||++|++|+|
T Consensus 334 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (501)
T 1bxs_A 334 NPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKS 413 (501)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred CCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCC
Confidence 999999999999999999999999999999999999999864456999999987 7899999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhee
Q 010506 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489 (508)
Q Consensus 410 ~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k 489 (508)
+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++|++.|
T Consensus 414 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K 490 (501)
T 1bxs_A 414 LDDVIKRANNTFYGLSAGIFTNDIDKAITVS--SALQSGTVWVNCYSV-VSAQCPFGGFKMSGNGRELGEYGFHEYTEVK 490 (501)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCCSEEEESCCCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred HHHHHHHHhcCCCCeeEEEEcCCHHHHHHHH--HhcCeeEEEECCCCC-CCCCCCCCCcCcCCcCccchHHHHHHhhCee
Confidence 9999999999999999999999999999999 789999999998654 3467999999999999999999999999999
Q ss_pred EEEEeCC
Q 010506 490 TCTINYG 496 (508)
Q Consensus 490 ~v~~~~~ 496 (508)
+|++++.
T Consensus 491 ~v~~~~~ 497 (501)
T 1bxs_A 491 TVTIKIS 497 (501)
T ss_dssp EEEEECS
T ss_pred EEEEccC
Confidence 9999864
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-102 Score=819.27 Aligned_cols=469 Identities=27% Similarity=0.479 Sum_probs=439.4
Q ss_pred CCCCceecCEEec--CCCe-EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhH
Q 010506 19 ETPGCFVNGKWKA--HGPT-VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (508)
Q Consensus 19 ~~~~~~i~g~~~~--~~~~-~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
..+++||||+|+. ++.+ ++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 97 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERR 97 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 4567899999984 3567 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHH
Q 010506 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 175 (508)
++|+++++.|+|||+.+++.|+..+++.+++++...+...+...+.. ++...+..++|+|||++|+|||||+.+.++++
T Consensus 98 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 176 (503)
T 1a4s_A 98 DNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKC 176 (503)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHHH
Confidence 99999999999999999999999999999999988877655433322 33456788999999999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH
Q 010506 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (508)
++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| + +.++.|++||+||+|+||||+.+|+.|++
T Consensus 177 a~ALaaGN~VVlKps~~tp~ta~~l~----~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~ 251 (503)
T 1a4s_A 177 APALACGNAVVFKPSPMTPVTGVILA----EIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVME 251 (503)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHH----HHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHH----HHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999998774 557789999999999999 6 88999999999999999999999999999
Q ss_pred HhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCC
Q 010506 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 255 ~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.+
T Consensus 252 ~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 331 (503)
T 1a4s_A 252 MSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331 (503)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc--C----CCCceeccEEE-ecCCCCcccccccccceeEeEEe
Q 010506 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI--E----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~--~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~ 407 (508)
+++++||+++..+++++.+++++++++|+++++||... + ..|+|++|||+ +++++|++++||+||||++|++|
T Consensus 332 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 411 (503)
T 1a4s_A 332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPF 411 (503)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred cCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEec
Confidence 99999999999999999999999999999999999764 2 36999999987 78999999999999999999999
Q ss_pred CCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhh
Q 010506 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487 (508)
Q Consensus 408 ~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~ 487 (508)
+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++
T Consensus 412 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~f~~ 488 (503)
T 1a4s_A 412 DTEEEVLQRANNTTFGLASGVFTRDISRAHRVA--ANLEAGTCYINTYSI-SPVEVPFGGYKMSGFGRENGQATVDYYSQ 488 (503)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCSSEEEESCCCC-CCTTSCBCCSGGGEECCBSTTGGGGGSEE
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH--HHCceeEEEECCCCC-CCCCCCCCCcCCCCCCccchHHHHHHhcC
Confidence 999999999999999999999999999999999 789999999998654 44678999999999999999999999999
Q ss_pred eeEEEEeCC
Q 010506 488 RSTCTINYG 496 (508)
Q Consensus 488 ~k~v~~~~~ 496 (508)
.|+|+++++
T Consensus 489 ~k~v~~~~~ 497 (503)
T 1a4s_A 489 LKTVIVEMG 497 (503)
T ss_dssp EEEEEECCS
T ss_pred ceEEEEccC
Confidence 999998753
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-102 Score=817.26 Aligned_cols=470 Identities=27% Similarity=0.459 Sum_probs=440.0
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhccCChhHHHHHHHHHHHHHHHhH
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKL 95 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
+.++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++ .|+.++.++|.++|+++++.|++++
T Consensus 8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~ 87 (495)
T 3b4w_A 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERK 87 (495)
T ss_dssp CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 346899999994 457899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHH
Q 010506 96 HHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (508)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 174 (508)
++|++++++|+|||+.+++ .|+...++.+++++...+.+.+...+.. .+...+..++|+|||++|+|||||+.+.+++
T Consensus 88 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 88 DLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTG-SYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEE-TTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 9999999999999999998 8999999999999988877665443321 2335678899999999999999999999999
Q ss_pred HHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH
Q 010506 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (508)
Q Consensus 175 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (508)
+++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+|+.+.++.|++||+||.|+||||+.+|+.|++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~----~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~ 242 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALA----EVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGR 242 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHH----HHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHH----HHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 999999999999999999999998774 5567899999999999998789999999999999999999999999999
Q ss_pred HhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCC
Q 010506 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 255 ~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.+
T Consensus 243 ~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 322 (495)
T 3b4w_A 243 RAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSD 322 (495)
T ss_dssp HHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTC
T ss_pred HhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHH
Q 010506 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ 411 (508)
+++++||+++.++++++.+++++++++|+++++||...+ ..|+|++|||+ ++++++++++||+||||++|++|+|+|
T Consensus 323 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 402 (495)
T 3b4w_A 323 PAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEE 402 (495)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHH
Confidence 999999999999999999999999999999999997643 36999999987 689999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 412 EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 412 eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++ ..+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 403 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v 478 (495)
T 3b4w_A 403 DAIAIANDSVYGLAGSVWTTDVPKGIKIS--QQIRTGTYGINWYA--FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSV 478 (495)
T ss_dssp HHHHHHHCSSCCSCCEEECSCHHHHHHHH--HHSCCSCCEESSCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEE
T ss_pred HHHHHHhcCCCCeEEEEECCCHHHHHHHH--HhCCEeEEEECCCC--CCCCCCCCCCCCCCcCccchHHHHHHhcceeEE
Confidence 99999999999999999999999999999 78999999999875 456899999999999999999999999999999
Q ss_pred EEeCCCC
Q 010506 492 TINYGNE 498 (508)
Q Consensus 492 ~~~~~~~ 498 (508)
+++++.+
T Consensus 479 ~~~~~~~ 485 (495)
T 3b4w_A 479 LLPMGYT 485 (495)
T ss_dssp ECCTTCC
T ss_pred EEccCcc
Confidence 9876543
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-101 Score=814.41 Aligned_cols=465 Identities=24% Similarity=0.434 Sum_probs=431.6
Q ss_pred CCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHh
Q 010506 17 SPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREK 94 (508)
Q Consensus 17 ~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
+....++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++
T Consensus 22 m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (497)
T 3i44_A 22 MLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKR 101 (497)
T ss_dssp CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Confidence 334678999999984 456899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEE-EeecceEEEEeCCCCchhhhH
Q 010506 95 LHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLET-WNPLGVVGVITAFNFPCAVLG 172 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~ 172 (508)
.++|+++++.|+|||+.+++ .|+...++.+++++...+......... .+...+.. ++|+|||++|+|||||+.+.+
T Consensus 102 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (497)
T 3i44_A 102 SSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI--EGNEQAILHYDAIGVVGLITPWNWPMNQVT 179 (497)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS--TTCSSCEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc--CCceeEEEeecCceEEEEECCCcchHHHHH
Confidence 99999999999999999999 899999999999887765543221111 13335566 999999999999999999999
Q ss_pred HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHH
Q 010506 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (508)
Q Consensus 173 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (508)
+++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.
T Consensus 180 ~~~a~ALaaGN~VVlKps~~tp~t~~~l----~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~ 255 (497)
T 3i44_A 180 LKVIPALLAGCTMVLKPSEIAPLSAMLF----AEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKD 255 (497)
T ss_dssp HHHHHHHHHTCEEEEECCTTSCHHHHHH----HHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCcccHHHHHHH----HHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHH
Confidence 9999999999999999999999999876 5557899999999999999 7789999999999999999999999999
Q ss_pred HHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCC
Q 010506 252 VQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (508)
Q Consensus 252 i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 331 (508)
|++.++++++|+++|+|||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 256 i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (497)
T 3i44_A 256 ISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGP 334 (497)
T ss_dssp HHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred HHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCc-ccC--CCCceeccEEE-ecCCCCcccccccccceeEeEEe
Q 010506 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGS-VIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (508)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~-~~~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~ 407 (508)
|.++++++||+++..+++++.+++++++++|+++++||. ..+ ..|+|++|||+ ++++++++++||+||||++|++|
T Consensus 335 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 414 (497)
T 3i44_A 335 GHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPF 414 (497)
T ss_dssp TTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEec
Confidence 999999999999999999999999999999999999994 322 26999999988 79999999999999999999999
Q ss_pred CCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhh
Q 010506 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487 (508)
Q Consensus 408 ~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~ 487 (508)
+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||. ....+.+||||+|.||+|+++|.+++++|++
T Consensus 415 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a--~~l~aG~V~iN~--~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~ 490 (497)
T 3i44_A 415 NTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIA--AQVRSGMVEVNG--HELPGGSYFGGVKFSGRAREGGLWGIKEFLD 490 (497)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHH--HHSCCSEEEETT--CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEE
T ss_pred CCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHH--HhCCcCeEEECC--CCCCCCCCcCCcCcCcCCccchHHHHHHhcc
Confidence 999999999999999999999999999999999 789999999995 3345678999999999999999999999999
Q ss_pred eeEEE
Q 010506 488 RSTCT 492 (508)
Q Consensus 488 ~k~v~ 492 (508)
.|+|+
T Consensus 491 ~K~v~ 495 (497)
T 3i44_A 491 TKAIS 495 (497)
T ss_dssp EEEES
T ss_pred eeEEE
Confidence 99884
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-101 Score=815.67 Aligned_cols=469 Identities=29% Similarity=0.484 Sum_probs=438.8
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH---HhccCChhHHHHHHHHHHHHHHHh
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK---IWMELPAPKRGEVVRQIGDALREK 94 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 19 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 98 (500)
T 1o04_A 19 CNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERD 98 (500)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHH
Confidence 346899999994 467899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHH
Q 010506 95 LHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 173 (508)
.++|++++++|+|||+.++. .|+...++.++|++...+...+...+. .++...+..++|+|||++|+|||||+.+.++
T Consensus 99 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 177 (500)
T 1o04_A 99 RTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAW 177 (500)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHH
Confidence 99999999999999999875 699999999999998877665543332 2344567889999999999999999999999
Q ss_pred HHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHH
Q 010506 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (508)
Q Consensus 174 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (508)
++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|++||+||+|+||||+.+|+.|
T Consensus 178 ~~a~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i 253 (500)
T 1o04_A 178 KLGPALATGNVVVMKVAEQTPLTALYV----ANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVI 253 (500)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCccChHHHHHH----HHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999876 4557889999999999999 78899999999999999999999999999
Q ss_pred HHHhh-hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCC
Q 010506 253 QQTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (508)
Q Consensus 253 ~~~a~-~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 331 (508)
++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 254 ~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 333 (500)
T 1o04_A 254 QVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333 (500)
T ss_dssp HHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCC
T ss_pred HHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCC
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCH
Q 010506 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
|.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+
T Consensus 334 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 413 (500)
T 1o04_A 334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413 (500)
T ss_dssp TTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCH
Confidence 99999999999999999999999999999999999999864346999999987 78999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeE
Q 010506 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~ 490 (508)
||||+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 414 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~ 490 (500)
T 1o04_A 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLS--QALQAGTVWVNCYDV-FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKT 490 (500)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHCCSSEEEESCSSC-CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEE
T ss_pred HHHHHHHhcCCCCceEEEECCCHHHHHHHH--HhCCeeEEEECCCCC-CCCCCCCCCcCCCCCCccchHHHHHHhcceEE
Confidence 999999999999999999999999999999 789999999998654 34679999999999999999999999999999
Q ss_pred EEEeCC
Q 010506 491 CTINYG 496 (508)
Q Consensus 491 v~~~~~ 496 (508)
|++++.
T Consensus 491 v~~~~~ 496 (500)
T 1o04_A 491 VTVKVP 496 (500)
T ss_dssp EEEECS
T ss_pred EEEecC
Confidence 999864
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-101 Score=813.97 Aligned_cols=475 Identities=27% Similarity=0.446 Sum_probs=429.9
Q ss_pred CCCCceecCEEe--cCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHH
Q 010506 19 ETPGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 19 ~~~~~~i~g~~~--~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
+..++||||+|+ .++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.+
T Consensus 11 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 90 (508)
T 3r64_A 11 DATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHRE 90 (508)
T ss_dssp CTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHH
Confidence 456799999999 356899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCC-CCCceeEEEEeecceEEEEeCCCCchhhhHHHH
Q 010506 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE-RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 175 (508)
+|+++++.|+|||..+++.|+..+++.+++++...+...+ ..+.. .++...+..++|+|||++|+|||||+.+.++++
T Consensus 91 ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 169 (508)
T 3r64_A 91 EIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSV 169 (508)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 9999999999999999999999999999999988776655 33322 234567889999999999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHH-HHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHH
Q 010506 176 CIALVCGNCVVWKGAPTTPLIT-IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~-~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (508)
++||++||+||+|||+.+|+++ ..+ .+++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|+
T Consensus 170 ~~ALaaGN~VVlKps~~tp~t~~~~l----~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~ 245 (508)
T 3r64_A 170 APALAVGNAVVIKPASDTPVTGGVIP----ARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVG 245 (508)
T ss_dssp HHHHHTTCEEEEECCTTCHHHHTHHH----HHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHH
T ss_pred HHHHhcCCEEEEECCCCChHHHHHHH----HHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHH
Confidence 9999999999999999999999 765 5668899999999999999 688999999999999999999999999999
Q ss_pred HHhhh--ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCC
Q 010506 254 QTVHQ--RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (508)
Q Consensus 254 ~~a~~--~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 331 (508)
+.+++ +++|+++|+|||||+||++|||++.|++.|++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 246 ~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 325 (508)
T 3r64_A 246 ELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGD 325 (508)
T ss_dssp HHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSC
T ss_pred HHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 99998 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCH
Q 010506 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
|.++++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+ ++++++++++||+||||++|++|+|+
T Consensus 326 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 402 (508)
T 3r64_A 326 PSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDE 402 (508)
T ss_dssp TTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSH
T ss_pred CccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCH
Confidence 9999999999999999999999999999999999999975 6899999987 79999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeE
Q 010506 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~ 490 (508)
||||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 403 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~ 480 (508)
T 3r64_A 403 AHAAELANASDFGLSAAVWSKDIDRAAQFA--LQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRW 480 (508)
T ss_dssp HHHHHHHTSSSCCSCEEEECSCHHHHHHHH--TTSCSSEEEECC--------------------CCCHHHHHHHTEEEEE
T ss_pred HHHHHHHhCCCCCcEEEEEcCCHHHHHHHH--HhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEE
Confidence 999999999999999999999999999999 789999999999765456778999999999999999999999999999
Q ss_pred EEEeCCCCCCCcc
Q 010506 491 CTINYGNELPLAQ 503 (508)
Q Consensus 491 v~~~~~~~~~~~~ 503 (508)
|++++....+..+
T Consensus 481 v~~~~~~~~~~~~ 493 (508)
T 3r64_A 481 IGIKRSAENLYFQ 493 (508)
T ss_dssp EEEECCSTTCCCC
T ss_pred EEEecccchhcch
Confidence 9999887766433
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-102 Score=820.00 Aligned_cols=469 Identities=28% Similarity=0.488 Sum_probs=440.5
Q ss_pred CCCCCCceecCEEe--cCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHh
Q 010506 17 SPETPGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREK 94 (508)
Q Consensus 17 ~~~~~~~~i~g~~~--~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
....+++||||+|+ .++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++
T Consensus 11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 90 (517)
T 3r31_A 11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRER 90 (517)
T ss_dssp TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHH
Confidence 34567899999998 3567999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhh----hcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhh
Q 010506 95 LHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQ----LNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAV 170 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 170 (508)
.++|+++++.|+|||..++ |+...++.+++++...+. +.+...+. .++. .+..++|+|||++|+|||||+.+
T Consensus 91 ~~ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P~~~ 166 (517)
T 3r31_A 91 NDALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYPQQI 166 (517)
T ss_dssp HHHHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCccccc-CCCc-ceEEEcCccEEEEECCCcchHHH
Confidence 9999999999999999998 999999999999988877 66554433 2344 78899999999999999999999
Q ss_pred hHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHH
Q 010506 171 LGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGL 250 (508)
Q Consensus 171 ~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~ 250 (508)
.++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.+.++.|++||+||.|+||||+.+|+
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l----~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~ 242 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKI----AEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGR 242 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHH----HHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCcccHHHHHHH----HHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHH
Confidence 999999999999999999999999999876 4557789999999999999888999999999999999999999999
Q ss_pred HHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccC
Q 010506 251 MVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (508)
Q Consensus 251 ~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g 330 (508)
.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 243 ~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 322 (517)
T 3r31_A 243 KVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG 322 (517)
T ss_dssp HHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceeccEEE-ecCCCCcccccccccceeEeEE
Q 010506 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMK 406 (508)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~---~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~ 406 (508)
||.++++++||+++.++++++.++|++++++|+++++||...+ .+|+|++|||+ ++++++++++||+||||++|++
T Consensus 323 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (517)
T 3r31_A 323 DPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLD 402 (517)
T ss_dssp CTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEE
T ss_pred CCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEE
Confidence 9999999999999999999999999999999999999993122 37999999987 7999999999999999999999
Q ss_pred eCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhh
Q 010506 407 FQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486 (508)
Q Consensus 407 ~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~ 486 (508)
|+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+.+. ..+.+||||+|.||+|+++|.+++++|+
T Consensus 403 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~ft 479 (517)
T 3r31_A 403 FDDEDEVLARANATEFGLAGGVFTADLARAHRVV--DGLEAGTLWINTYNL-CPVEIPFGGSKQSGFGRENSAAALEHYS 479 (517)
T ss_dssp ECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHH--HHSCCSEEEESSCCC-CCTTSCBCCEETTEECCBSTGGGGGGSE
T ss_pred eCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHH--HHCCcceEEECCCCC-CCCCCCcCCcCcCCCCcCchHHHHHHhh
Confidence 9999999999999999999999999999999999 789999999999653 4578999999999999999999999999
Q ss_pred heeEEEEeCC
Q 010506 487 RRSTCTINYG 496 (508)
Q Consensus 487 ~~k~v~~~~~ 496 (508)
+.|+|++++.
T Consensus 480 ~~K~v~~~~~ 489 (517)
T 3r31_A 480 ELKTVYVSTG 489 (517)
T ss_dssp EEEEEEECCC
T ss_pred ceEEEEEcCC
Confidence 9999999864
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-101 Score=812.36 Aligned_cols=466 Identities=27% Similarity=0.445 Sum_probs=435.9
Q ss_pred CCceecCEEecC-CCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010506 21 PGCFVNGKWKAH-GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 21 ~~~~i~g~~~~~-~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
.++||||+|+.+ +.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+
T Consensus 24 ~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 103 (495)
T 1wnd_A 24 HKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFA 103 (495)
T ss_dssp CCEEETTEEECCCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred cCeEECCEEecCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568999999943 3789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhh-hHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHH
Q 010506 100 RLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (508)
Q Consensus 100 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 178 (508)
++++.|+|||+.+++. |+...++.+++++...+...++..+...++...+..++|+|||++|+|||||+.+.++++++|
T Consensus 104 ~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~A 183 (495)
T 1wnd_A 104 ELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPA 183 (495)
T ss_dssp HHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHH
Confidence 9999999999999987 999999999999988776654433322234456788999999999999999999999999999
Q ss_pred hhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhh
Q 010506 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (508)
Q Consensus 179 LaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (508)
|++||+||+|||+.+|+++..+++ ++.++ +|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|++.++
T Consensus 184 LaaGN~VVlKps~~tp~t~~~l~~----l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 258 (495)
T 1wnd_A 184 LAAGNCVVLKPSEITPLTALKLAE----LAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 258 (495)
T ss_dssp HHTTCEEEEECCTTCCHHHHHHHH----HHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHcCCeeEeeCCCCChHHHHHHHH----HHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 999999999999999999988754 56677 99999999999 7889999999999999999999999999999999
Q ss_pred hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCC
Q 010506 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337 (508)
Q Consensus 258 ~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~ 337 (508)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++
T Consensus 259 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 338 (495)
T 1wnd_A 259 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDEST 338 (495)
T ss_dssp GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTC
T ss_pred hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHCC-CeEeeCCc-ccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHH
Q 010506 338 LLGPLHTPESRKNFEKGIENIKSQG-GKILTGGS-VIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAV 414 (508)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~g-a~v~~gg~-~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 414 (508)
++||+++..+++++.+++++++++| +++++||. .. +.|+|++|||+ +++++|++++||+||||++|++|+|+||||
T Consensus 339 ~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 417 (495)
T 1wnd_A 339 ELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVV 417 (495)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred CccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHH
Confidence 9999999999999999999999999 99999997 53 36999999987 799999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEe
Q 010506 415 KINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 415 ~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 494 (508)
+++|+++|||+++|||+|.+++++++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 418 ~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 418 NWANDSQYGLASSVWTKDVGRAHRVS--ARLQYGCTWVNTHFM-LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHHSSSCCSEEEEECSBHHHHHHHH--HHCCSSEEEESCCCC-CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhcCCCCeeEEEECCCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 99999999999999999999999999 789999999998654 346799999999999999999999999999999886
Q ss_pred C
Q 010506 495 Y 495 (508)
Q Consensus 495 ~ 495 (508)
+
T Consensus 495 ~ 495 (495)
T 1wnd_A 495 H 495 (495)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-101 Score=812.58 Aligned_cols=476 Identities=26% Similarity=0.470 Sum_probs=441.2
Q ss_pred hhcCCCCCCCCceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHH
Q 010506 12 SEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDAL 91 (508)
Q Consensus 12 ~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l 91 (508)
+.|--.....++||||+|+.+..+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|
T Consensus 4 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l 83 (487)
T 2w8n_A 4 AGLSAALLRTDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLM 83 (487)
T ss_dssp ----CCCCCCSEEETTEEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred cccCccccccCeeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 33333334467899999995448899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhh
Q 010506 92 REKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVL 171 (508)
Q Consensus 92 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 171 (508)
+++.++|+++++.|+|||..+++.|+...++.+++++...+.+.+...+...++...+..++|+|||++|+|||||+.+.
T Consensus 84 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 163 (487)
T 2w8n_A 84 IQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMI 163 (487)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence 99999999999999999999999999999999999998887766554333233456678899999999999999999999
Q ss_pred HHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEec---C-ChhhHHHHHcCCCcCEEEEeCCHH
Q 010506 172 GWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFC---G-GAEIGQAIAKDPRISLVSFTGSTK 247 (508)
Q Consensus 172 ~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~---g-~~~~~~~L~~~~~v~~v~ftGs~~ 247 (508)
++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+ | +.+.++.|++||+||+|+||||+.
T Consensus 164 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~ 239 (487)
T 2w8n_A 164 TRKVGAALAAGCTVVVKPAEDTPFSALAL----AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTT 239 (487)
T ss_dssp HHHHHHHHHHTCEEEEECCTTCCHHHHHH----HHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHH
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHH----HHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHH
Confidence 99999999999999999999999999876 455688999999999999 8 778899999999999999999999
Q ss_pred HHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhh-
Q 010506 248 VGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ- 326 (508)
Q Consensus 248 ~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~- 326 (508)
+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++++
T Consensus 240 ~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 319 (487)
T 2w8n_A 240 TGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKN 319 (487)
T ss_dssp HHHHHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCc-eeccEEE-ecCCCCcccccccccceeEe
Q 010506 327 VKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN-FVQPTIV-EISPTADIVKEELFAPVLYV 404 (508)
Q Consensus 327 ~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~-~~~Ptv~-~~~~~~~~~~~E~fgPvl~v 404 (508)
+++|||.++++++||+++..+++++.+++++++++|+++++||... ..|+ |++|||+ ++++++++++||+||||++|
T Consensus 320 ~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v 398 (487)
T 2w8n_A 320 LRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPV 398 (487)
T ss_dssp CCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEE
T ss_pred cccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEE
Confidence 9999999999999999999999999999999999999999999763 3689 9999988 79999999999999999999
Q ss_pred EEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHH
Q 010506 405 MKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQ 484 (508)
Q Consensus 405 ~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~ 484 (508)
++|+|+||||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++
T Consensus 399 ~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~-~~~~PfGG~~~SG~G~~~G~~~l~~ 475 (487)
T 2w8n_A 399 IKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVA--EQLEVGMVGVNEGLIS-SVECPFGGVKQSGLGREGSKYGIDE 475 (487)
T ss_dssp EEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHH--HHSCSSEEEESCSCCC-CTTSCBCCSGGGEESCBSTTTGGGG
T ss_pred EEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHH--HhCCeeeEEEcCCCCC-CCCCCCCCCCCCCcCCCchHHHHHH
Confidence 999999999999999999999999999999999999 7899999999986654 4569999999999999999999999
Q ss_pred hhheeEEEEeC
Q 010506 485 YMRRSTCTINY 495 (508)
Q Consensus 485 ~~~~k~v~~~~ 495 (508)
|++.|+|++++
T Consensus 476 f~~~k~v~~~~ 486 (487)
T 2w8n_A 476 YLELKYVCYGG 486 (487)
T ss_dssp GEEEEEEEECC
T ss_pred hcCccEEEEec
Confidence 99999998753
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-101 Score=810.20 Aligned_cols=471 Identities=27% Similarity=0.413 Sum_probs=420.1
Q ss_pred CCCCCceecCEEe--cCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhH
Q 010506 18 PETPGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (508)
Q Consensus 18 ~~~~~~~i~g~~~--~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
.+.+++||||+|+ .++++++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (485)
T 4dng_A 4 ETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENR 83 (485)
T ss_dssp GGCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 3456899999999 35689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCC-CCCceeEEEEeecceEEEEeCCCCchhhhHHH
Q 010506 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE-RPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (508)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 174 (508)
++|++++++|+|||+.+++.|+..+++.+++++...+.+.+...+.. .++...+..++|+|||++|+|||||+.+.+++
T Consensus 84 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 163 (485)
T 4dng_A 84 DDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRS 163 (485)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999998887766544432 23456788999999999999999999999999
Q ss_pred HHHHhhcCCEEEeeCCCCChhHH-HHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHH
Q 010506 175 ACIALVCGNCVVWKGAPTTPLIT-IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (508)
Q Consensus 175 l~~ALaaGN~VVlkps~~~~~~~-~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (508)
+++||++||+||+|||+.+|+++ ..+ .+++.++|+|+|++|+|+| +.+.++.|++||++|.|+||||+.+|+.|
T Consensus 164 ~~~ALaaGN~VVlKps~~tp~~~~~~l----~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i 239 (485)
T 4dng_A 164 IAPAIALGNSVVHKPDIQTAISGGTII----AKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI 239 (485)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHTHHH----HHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHH----HHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHH
Confidence 99999999999999999999999 765 6678899999999999999 55689999999999999999999999999
Q ss_pred HHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCC
Q 010506 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (508)
Q Consensus 253 ~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p 332 (508)
++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 240 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~ 319 (485)
T 4dng_A 240 GEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQ 319 (485)
T ss_dssp HHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHH
Q 010506 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (508)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ 411 (508)
.++++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+ ++++++++++||+||||++|++|+|+|
T Consensus 320 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ 396 (485)
T 4dng_A 320 TDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQ 396 (485)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHH
T ss_pred CcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHH
Confidence 999999999999999999999999999999999999975 6999999988 799999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 412 EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 412 eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 397 eAi~~an~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v 474 (485)
T 4dng_A 397 EAIDMANDTEYGLSSAVFTSDLEKGEKFA--LQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWI 474 (485)
T ss_dssp HHHHHHHCSSCCSEEEEECSCHHHHHHHH--TTSCSSEEEESCC----------------------CHHHHHHHEEEEEE
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHH--HhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEE
Confidence 99999999999999999999999999999 7899999999997655567899999999999999999999999999999
Q ss_pred EEeCCC
Q 010506 492 TINYGN 497 (508)
Q Consensus 492 ~~~~~~ 497 (508)
++++..
T Consensus 475 ~~~~~~ 480 (485)
T 4dng_A 475 SIQKQY 480 (485)
T ss_dssp EEEC--
T ss_pred EEecCC
Confidence 998753
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-101 Score=812.62 Aligned_cols=478 Identities=26% Similarity=0.420 Sum_probs=441.9
Q ss_pred hhhcCCCCCCCCceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH-HhccCChhHHHHHHHHHHH
Q 010506 11 LSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-IWMELPAPKRGEVVRQIGD 89 (508)
Q Consensus 11 ~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~-~w~~~~~~~R~~~L~~~a~ 89 (508)
|+++.... .+++||||+|+.+..+++++||+||+++++++.++.+|+++++++|++|++ .|+.++.++|.++|+++++
T Consensus 10 ~~~~~~~~-~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~ 88 (501)
T 1uxt_A 10 IKEKGGVP-VYPSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAAD 88 (501)
T ss_dssp SEEETTEE-EECEECSSSEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHhcCCc-ccceeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHH
Confidence 33444333 567899999995448899999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCC--CC--CceeEEEEeecceEEEEeCCC
Q 010506 90 ALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE--RP--NHMMLETWNPLGVVGVITAFN 165 (508)
Q Consensus 90 ~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~P~GVv~~i~p~n 165 (508)
.|+++.++|+++++.|+|||..+++.|+..+++.+++++...+...+...+.. .. +...+..++|+|||++|+|||
T Consensus 89 ~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 168 (501)
T 1uxt_A 89 IIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFN 168 (501)
T ss_dssp HHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTT
T ss_pred HHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCc
Confidence 99999999999999999999999999999999999999998877755443322 12 235678899999999999999
Q ss_pred CchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCC
Q 010506 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGS 245 (508)
Q Consensus 166 ~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs 245 (508)
||+.+.++++++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+|+.+.++.|++||+||.|+||||
T Consensus 169 ~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~----~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS 244 (501)
T 1uxt_A 169 YPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAV----KALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGS 244 (501)
T ss_dssp STTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHH----HHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESC
T ss_pred cHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHH----HHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCc
Confidence 999999999999999999999999999999998774 5567899999999999994488999999999999999999
Q ss_pred HHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhh
Q 010506 246 TKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYK 325 (508)
Q Consensus 246 ~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~ 325 (508)
+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 245 ~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 322 (501)
T 1uxt_A 245 TEVGERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLS 322 (501)
T ss_dssp HHHHHHHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHH
Confidence 999999999987 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCC-ceeccEEE-ecC---CCCcccccccccc
Q 010506 326 QVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG-NFVQPTIV-EIS---PTADIVKEELFAP 400 (508)
Q Consensus 326 ~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g-~~~~Ptv~-~~~---~~~~~~~~E~fgP 400 (508)
++++|||.++++++||+++..+++++.+++++++++|+++++||.. .| +|++|||+ +++ ++|.+++||+|||
T Consensus 323 ~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGP 399 (501)
T 1uxt_A 323 SLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAP 399 (501)
T ss_dssp TCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSS
T ss_pred hccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCc
Confidence 9999999999999999999999999999999999999999999975 57 99999988 788 9999999999999
Q ss_pred eeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHH
Q 010506 401 VLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480 (508)
Q Consensus 401 vl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~ 480 (508)
|++|++|+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++....+.+||||+|.||+|+++|.+
T Consensus 400 Vl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~ 477 (501)
T 1uxt_A 400 VALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAV--RLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGY 477 (501)
T ss_dssp EEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHH--HHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTT
T ss_pred eEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHH--HhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHH
Confidence 9999999999999999999999999999999999999999 78999999999863334568999999999999999999
Q ss_pred HHHHhhheeEEEEeCCCCCC
Q 010506 481 SWKQYMRRSTCTINYGNELP 500 (508)
Q Consensus 481 ~~~~~~~~k~v~~~~~~~~~ 500 (508)
++++|++.|+|++++..+.+
T Consensus 478 ~l~~f~~~k~v~~~~~~~~~ 497 (501)
T 1uxt_A 478 AVEAVTAYKTIVFNYKGKGV 497 (501)
T ss_dssp THHHHEEEEEEEEECTTSSS
T ss_pred HHHHhCceeEEEEecCCCcc
Confidence 99999999999998755444
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-100 Score=804.95 Aligned_cols=465 Identities=25% Similarity=0.458 Sum_probs=434.2
Q ss_pred CCCCCceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010506 18 PETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 18 ~~~~~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
++++++||||+|+.+..+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++
T Consensus 2 ~~~~~~~i~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 81 (475)
T 1euh_A 2 TKQYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 81 (475)
T ss_dssp CCBCCEEETTEEECCSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CcccceeECCEEecCCCceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45678999999995444999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCC----cee-EEEEeecceEEEEeCCCCchhhhH
Q 010506 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPN----HMM-LETWNPLGVVGVITAFNFPCAVLG 172 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~~~~ 172 (508)
|+++++.|+|||+.+++.|+..+++.+++++...+...++..+...++ ... +..++|+|||++|+|||||+.+.+
T Consensus 82 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (475)
T 1euh_A 82 IGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAG 161 (475)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHH
Confidence 999999999999999999999999999999988776554432222233 355 788999999999999999999999
Q ss_pred HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHH
Q 010506 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (508)
Q Consensus 173 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (508)
+++++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||++|.|+||||+.+|+.
T Consensus 162 ~~~~~ALaaGN~vVlKps~~tp~t~~~l~----~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~ 237 (475)
T 1euh_A 162 SKIAPALIAGNVIAFKPPTQGSISGLLLA----EAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237 (475)
T ss_dssp HHHHHHHHTTCEEEEECCSTTHHHHHHHH----HHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEeCCCcChHHHHHHH----HHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHH
Confidence 99999999999999999999999998875 456789999999999999 4678999999999999999999999999
Q ss_pred HHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCC
Q 010506 252 VQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (508)
Q Consensus 252 i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 331 (508)
|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 238 i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 315 (475)
T 1euh_A 238 IGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN 315 (475)
T ss_dssp HHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSC
T ss_pred HHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 999987 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCH
Q 010506 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
|.+ ++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+ ++++++++++||+||||++|++|+|+
T Consensus 316 p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 391 (475)
T 1euh_A 316 PED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391 (475)
T ss_dssp GGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCH
T ss_pred ccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCH
Confidence 999 999999999999999999999999999999999975 5899999987 68999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcC-CCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhee
Q 010506 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNI-PTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~-~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k 489 (508)
||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+ ++. ..+.+||||+|.||+|+++|.+++++|++.|
T Consensus 392 ~eai~~an~~~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~vN~~~~~-~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 468 (475)
T 1euh_A 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIA--EQLEVGTVHINNKTQR-GTDNFPFLGAKKSGAGIQGVKYSIEAMTTVK 468 (475)
T ss_dssp HHHHHHHHHSSEESEEEEECSCHHHHHHHH--HHSCSSEEEESSCCCC-CSTTSCBCCEETTEESCBSHHHHHHHTEEEE
T ss_pred HHHHHHHhCCCCCeeEEEEeCCHHHHHHHH--HhCCEeeEEECCCCCC-CCCCCCcCCCCCCCcCCCccHHHHHHhCCee
Confidence 999999999999999999999999999999 789999999998 554 3568999999999999999999999999999
Q ss_pred EEEEeC
Q 010506 490 TCTINY 495 (508)
Q Consensus 490 ~v~~~~ 495 (508)
+|++++
T Consensus 469 ~v~~~~ 474 (475)
T 1euh_A 469 SVVFDI 474 (475)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 998864
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-100 Score=805.07 Aligned_cols=470 Identities=28% Similarity=0.473 Sum_probs=438.3
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
++++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 84 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEE 84 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 367899999984 457899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHH
Q 010506 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 177 (508)
|++++++|+|||+.+++.|+..+++.+++++...+.+.+...+...++...+..++|+|||++|+|||||+.+.++++++
T Consensus 85 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 164 (486)
T 1t90_A 85 LAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPM 164 (486)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHH
Confidence 99999999999999999999999999999988777665543321123345678899999999999999999999999999
Q ss_pred HhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhh
Q 010506 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (508)
Q Consensus 178 ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (508)
||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+|+.+.++.|++||+||.|+||||+.+|+.|++.++
T Consensus 165 ALaaGN~VVlKps~~tp~t~~~l~----~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa 240 (486)
T 1t90_A 165 AIALGNTFILKPSERTPLLTEKLV----ELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240 (486)
T ss_dssp HHHTTCEEEEECCSSSCHHHHHHH----HHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCCChHHHHHHH----HHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh
Confidence 999999999999999999998774 5567899999999999997788999999999999999999999999999999
Q ss_pred hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCce-EEEecccHHHHHHHHHHhhhhcccCCCCCCC
Q 010506 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRR-LLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (508)
Q Consensus 258 ~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~-v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 336 (508)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ ||+|+++|+++++++++|+|.+++
T Consensus 241 ~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~ 319 (486)
T 1t90_A 241 ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDG 319 (486)
T ss_dssp HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccC
Confidence 999999999999999999999999999999999999999999999999 999999 999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHH
Q 010506 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAV 414 (508)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~-~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 414 (508)
+++||+++..+++++.+++++++++|+++++||...+ ..|+|++|||+ ++++++++++||+||||++|++|+|+||||
T Consensus 320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai 399 (486)
T 1t90_A 320 VFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAI 399 (486)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHH
Confidence 9999999999999999999999999999999997532 36999999987 689999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC--CcchHHHHHHhhheeEEE
Q 010506 415 KINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG--REAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 415 ~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g--~~~g~~~~~~~~~~k~v~ 492 (508)
+++|+++|||+++|||+|.+++++++ .++++|+|+||++....++.+||||+|.||+| +++|.+|+++|++.|+|+
T Consensus 400 ~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~ 477 (486)
T 1t90_A 400 EIANKSEFANGACLFTSNSNAIRYFR--ENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVT 477 (486)
T ss_dssp HHHHHSSEESEEEEECCBHHHHHHHH--HHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEE
T ss_pred HHHhCCCCCeEEEEEcCCHHHHHHHH--HhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999 78999999999865544567899999999999 899999999999999999
Q ss_pred EeCC
Q 010506 493 INYG 496 (508)
Q Consensus 493 ~~~~ 496 (508)
++++
T Consensus 478 ~~~~ 481 (486)
T 1t90_A 478 ARYP 481 (486)
T ss_dssp EECC
T ss_pred EecC
Confidence 9864
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-100 Score=805.06 Aligned_cols=454 Identities=25% Similarity=0.392 Sum_probs=428.9
Q ss_pred CeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhh
Q 010506 34 PTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG 113 (508)
Q Consensus 34 ~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 113 (508)
.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++
T Consensus 4 ~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 83 (484)
T 3ros_A 4 SKYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSES 83 (484)
T ss_dssp CCCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred CccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCC
Q 010506 114 IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTT 193 (508)
Q Consensus 114 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~ 193 (508)
+.|+...++.+++++...+...+...+.. .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus 84 ~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~t 162 (484)
T 3ros_A 84 KEEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNV 162 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCEEECC-TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeeccC-CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCC
Confidence 99999999999999988877665543332 34577889999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCe
Q 010506 194 PLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272 (508)
Q Consensus 194 ~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~ 272 (508)
|+++..+ .+++.++|+|+|++|+|+| +.+.++ |++||+||.|+||||+.+|+.|++.++++++|+++|+|||||
T Consensus 163 p~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p 237 (484)
T 3ros_A 163 PGSAALT----AKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDA 237 (484)
T ss_dssp HHHHHHH----HHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCE
T ss_pred hHHHHHH----HHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCc
Confidence 9999876 4556788999999999999 556677 999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHH
Q 010506 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFE 352 (508)
Q Consensus 273 ~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~ 352 (508)
+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++++||+++.++++++.
T Consensus 238 ~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~ 317 (484)
T 3ros_A 238 FIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLE 317 (484)
T ss_dssp EEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHH
T ss_pred ceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecC
Q 010506 353 KGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431 (508)
Q Consensus 353 ~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~ 431 (508)
+++++++++|+++++||...+..|+|++|||+ ++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 318 ~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~ 397 (484)
T 3ros_A 318 AQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGS 397 (484)
T ss_dssp HHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECS
T ss_pred HHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECC
Confidence 99999999999999999875678999999988 69999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeCC
Q 010506 432 SPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 432 d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|++++.
T Consensus 398 d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 398 DIDRAKKVS--AQIETGMTVINGRWI-TSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp CHHHHHHHH--HHSCSSCCEETSCCC-CCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred CHHHHHHHH--HhCccceEEECCCCC-CCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 999999999 789999999999643 45789999999999999999999999999999998764
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-100 Score=807.27 Aligned_cols=469 Identities=27% Similarity=0.478 Sum_probs=436.4
Q ss_pred CCCCceecCEEecCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010506 19 ETPGCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 19 ~~~~~~i~g~~~~~~~~~~v~~P~-~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
..+++||||+|+.++.+++++||+ ||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++
T Consensus 36 ~~~~~~i~G~~~~~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (516)
T 1uzb_A 36 RHYPLYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRE 115 (516)
T ss_dssp EEECEEETTEEECCSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cccceeECCEEecCCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456899999999767889999999 6999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCccc-CCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHH
Q 010506 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP-SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 176 (508)
|+++++.|+|||+.+++.|+...++.+++++...+.+.+...+ ...++...+..++|+|||++|+|||||+.+.+++++
T Consensus 116 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 195 (516)
T 1uzb_A 116 LEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIV 195 (516)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHH
Confidence 9999999999999999999999999999999887776654322 222344567889999999999999999999999999
Q ss_pred HHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHH
Q 010506 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (508)
Q Consensus 177 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (508)
+||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|++.
T Consensus 196 ~ALaaGN~VVlKps~~tp~ta~~l~----~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~ 271 (516)
T 1uzb_A 196 GPVAVGNTVIAKPAEDAVVVGAKVF----EIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHTTCEEEEECCGGGHHHHHHHH----HHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCeEEEeCCCCCHHHHHHHH----HHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHH
Confidence 9999999999999999999998764 556789999999999999 78899999999999999999999999999999
Q ss_pred hh------hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhccc
Q 010506 256 VH------QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329 (508)
Q Consensus 256 a~------~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~ 329 (508)
++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 272 aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 351 (516)
T 1uzb_A 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred hhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence 98 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeC
Q 010506 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ 408 (508)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~ 408 (508)
|+| ++++++||+++..+++++.+++++++++| ++++||...+..|+|++|||+ +++++|++++||+||||++|++|+
T Consensus 352 G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 429 (516)
T 1uzb_A 352 GPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp SCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeC
Confidence 999 99999999999999999999999999888 899999763346999999987 799999999999999999999999
Q ss_pred CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCC-CCCCCCccCCCCCCCCC-cchHHHHHHhh
Q 010506 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNG-AEIGGAFGGEKATGGGR-EAGSDSWKQYM 486 (508)
Q Consensus 409 ~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~-~~~~~pfGG~~~SG~g~-~~g~~~~~~~~ 486 (508)
|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++.. ..+.+||||+|.||+|+ .+|.+++++|+
T Consensus 430 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~ 507 (516)
T 1uzb_A 430 DFAEALEVANDTPYGLTGGVYSRKREHLEWAR--REFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFL 507 (516)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHH--HHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHH--HhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcC
Confidence 99999999999999999999999999999999 7899999999986543 34578999999999995 68999999999
Q ss_pred heeEEEEeC
Q 010506 487 RRSTCTINY 495 (508)
Q Consensus 487 ~~k~v~~~~ 495 (508)
+.|+|++++
T Consensus 508 ~~k~v~~~~ 516 (516)
T 1uzb_A 508 EMKAVAERF 516 (516)
T ss_dssp EEEEEEEEC
T ss_pred CeeEEEecC
Confidence 999998864
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-99 Score=796.90 Aligned_cols=461 Identities=26% Similarity=0.456 Sum_probs=411.5
Q ss_pred CCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHH
Q 010506 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 19 ~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
...++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.+
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 85 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKD 85 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4567999999984 66799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhh-hhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHH
Q 010506 97 HLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 175 (508)
+|+++++.|+|||..++ +.|+...++.+++++...+...+... ....+..++|+|||++|+|||||+.+.++++
T Consensus 86 ~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 160 (478)
T 3ty7_A 86 DIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKL 160 (478)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHH
Confidence 99999999999999999 68999999999999988776654321 2346778999999999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH
Q 010506 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (508)
++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|+.||+||.|+||||+.+|+.|++
T Consensus 161 ~~ALaaGN~VVlKps~~tp~t~~~l~----~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~ 236 (478)
T 3ty7_A 161 AAAFAAGSPVVLKPSEETPFAAVILA----EIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIME 236 (478)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHH----HHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--C
T ss_pred HHHHHcCCeEEEECCCcchHHHHHHH----HHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999998764 556788999999999999 7789999999999999999999999999999
Q ss_pred HhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCC
Q 010506 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 255 ~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.+
T Consensus 237 ~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 316 (478)
T 3ty7_A 237 KAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPRE 316 (478)
T ss_dssp STTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcc-cC--CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCH
Q 010506 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV-IE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~-~~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
+++++||+++.++++++.+++++++++|+++++||.. .+ ..|+|++|||+ ++++++++++||+||||++|++|+|+
T Consensus 317 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 396 (478)
T 3ty7_A 317 DGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDL 396 (478)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCH
Confidence 9999999999999999999999999999999999943 22 47999999987 79999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeE
Q 010506 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~ 490 (508)
||||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+ ....+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 397 ~eAi~~an~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~vN~--~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~ 472 (478)
T 3ty7_A 397 DEAIQIANDTKYGLAGYVIGKDKETLHKVA--RSIEAGTVEINE--AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKS 472 (478)
T ss_dssp HHHHHHHTCSSCCSEEEEECSCHHHHHHHH--HHSCSSEEEETT--CC----------------------CCGGGEEEEE
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHH--HhCCcCeEEECC--CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEE
Confidence 999999999999999999999999999999 789999999999 3345678999999999999999999999999999
Q ss_pred EE
Q 010506 491 CT 492 (508)
Q Consensus 491 v~ 492 (508)
|+
T Consensus 473 v~ 474 (478)
T 3ty7_A 473 IA 474 (478)
T ss_dssp EE
T ss_pred EE
Confidence 86
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-99 Score=801.38 Aligned_cols=482 Identities=24% Similarity=0.360 Sum_probs=440.7
Q ss_pred hhhhhcCCCCCCCCceecCEEecCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHH
Q 010506 9 EFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQI 87 (508)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~ 87 (508)
++|.++.....++++||||+|+.++..+.++||+| ++++++++.++.+|+++|+++|++|++.|+.++.++|.++|+++
T Consensus 52 ~a~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~ 131 (563)
T 4e3x_A 52 KALKDLKGQTEAIPCVVGDEEVWTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKA 131 (563)
T ss_dssp HHHHTTTTCCEECCEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHhCCccCCeEECCEEeecCCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 45666766677899999999997777888999998 78999999999999999999999999999999999999999999
Q ss_pred HHHHHHh-HHHHHHHHHHHhCCChhhhhhh-HHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCC
Q 010506 88 GDALREK-LHHLGRLLSIEMGKILPEGIGE-VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFN 165 (508)
Q Consensus 88 a~~l~~~-~~~la~~~~~e~Gk~~~~a~~e-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n 165 (508)
+++|+++ +++|+.+++.|+|||+.+++.+ +..+++.+++++...+.+.+.......++...+.++.|+|||++|+|||
T Consensus 132 a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwN 211 (563)
T 4e3x_A 132 ADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFN 211 (563)
T ss_dssp HHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSS
T ss_pred HHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCch
Confidence 9999999 9999999999999999999876 9999999999999887776543222222233455666789999999999
Q ss_pred CchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeC
Q 010506 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244 (508)
Q Consensus 166 ~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftG 244 (508)
||+....+++++|| +||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+| +.+.++.|++||+|++|+|||
T Consensus 212 fP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l----~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTG 286 (563)
T 4e3x_A 212 FTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAV----YRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTG 286 (563)
T ss_dssp CHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEES
T ss_pred HHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHH----HHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEEC
Confidence 99999999999999 59999999999999999876 5567889999999999999 677899999999999999999
Q ss_pred CHHHHHHHHHHhhhccCc------eeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHH
Q 010506 245 STKVGLMVQQTVHQRFGK------CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318 (508)
Q Consensus 245 s~~~g~~i~~~a~~~~~~------~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~ 318 (508)
|+.+|+.|++.++++++| +++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|++
T Consensus 287 St~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~ 366 (563)
T 4e3x_A 287 SVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKG 366 (563)
T ss_dssp CHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHH
Confidence 999999999999998884 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcccCCC-CCCCCccCCCCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCCCCceeccEEE-ecCCCCccccc
Q 010506 319 QLVDVYKQVKIGDP-LEKGTLLGPLHTPESRKNFEKGIENIKS-QGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKE 395 (508)
Q Consensus 319 ~L~~~~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~v~~a~~-~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~ 395 (508)
+|+++++++++||| .|+++++||+++..+++++.++|+++++ .|+++++||...+..|+|++|||+ ++++++.+++|
T Consensus 367 ~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~e 446 (563)
T 4e3x_A 367 RLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKE 446 (563)
T ss_dssp HHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTS
T ss_pred HHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcC
Confidence 99999999999999 9999999999999999999999999996 799999999876668999999987 79999999999
Q ss_pred ccccceeEeEEeCC--HHHHHHHh-ccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCC-CCCCCccCCCCC
Q 010506 396 ELFAPVLYVMKFQT--FEEAVKIN-NSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGA-EIGGAFGGEKAT 471 (508)
Q Consensus 396 E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfGG~~~S 471 (508)
|+||||++|++|+| +||||+++ |+++|||+++|||+|.+.+++++++.++++|+|+||+.++.. ...+||||+|.|
T Consensus 447 EiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~S 526 (563)
T 4e3x_A 447 EIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARAS 526 (563)
T ss_dssp CCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETT
T ss_pred CCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCcccc
Confidence 99999999999986 79999999 799999999999999999999984333459999999975443 456899999999
Q ss_pred CCC-CcchHHHHHHhhheeEEEEeC
Q 010506 472 GGG-REAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 472 G~g-~~~g~~~~~~~~~~k~v~~~~ 495 (508)
|+| +.+|++++++|++.|+|..++
T Consensus 527 G~g~~~~G~~~l~~~~~~k~v~~~~ 551 (563)
T 4e3x_A 527 GTNDKPGGPHYILRWTSPQVIKETH 551 (563)
T ss_dssp BCCCCTTSTTGGGGGBCCEEEEEEC
T ss_pred CCCCccCCHHHHHHhCceEEEEEeC
Confidence 998 889999999999999999986
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-98 Score=786.54 Aligned_cols=455 Identities=27% Similarity=0.446 Sum_probs=429.9
Q ss_pred CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChh
Q 010506 32 HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP 111 (508)
Q Consensus 32 ~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 111 (508)
+..+++++||+||+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCC
Q 010506 112 EGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (508)
Q Consensus 112 ~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 191 (508)
+++.|+..+++.+++++...+...+.. +...++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 85 ~a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~ 163 (462)
T 3etf_A 85 QARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAP 163 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCC
Confidence 999999999999999998877665543 2223345678899999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccC
Q 010506 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271 (508)
Q Consensus 192 ~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~ 271 (508)
.+|+++..+ .+++.++|+|+|++|+|+|+.+.+..|++||+++.|+||||+.+|+.|++.++++++|+++|+||||
T Consensus 164 ~tp~~~~~l----~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~ 239 (462)
T 3etf_A 164 NVTGCAQMI----ARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSD 239 (462)
T ss_dssp TCHHHHHHH----HHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCE
T ss_pred CCcHHHHHH----HHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCC
Confidence 999999876 5567899999999999999888889999999999999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHH
Q 010506 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351 (508)
Q Consensus 272 ~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 351 (508)
|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEec
Q 010506 352 EKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (508)
Q Consensus 352 ~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s 430 (508)
.+++++++++|+++++||...+..|+|++|||+ ++++++++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t 399 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEEC
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEEC
Confidence 999999999999999999865678999999988 7999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEe
Q 010506 431 RSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 431 ~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 494 (508)
+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 400 ~d~~~a~~~~--~~l~aG~v~vN~~~~-~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 400 ADDTLAAEMA--ARLECGGVFINGYSA-SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKN 460 (462)
T ss_dssp SCHHHHHHHH--HHCCSSEEEESSCCC-CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEC
T ss_pred CCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEe
Confidence 9999999999 789999999999653 456789999999999999999999999999999875
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-97 Score=781.08 Aligned_cols=462 Identities=27% Similarity=0.443 Sum_probs=431.9
Q ss_pred CCceecCEEec-CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010506 21 PGCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 21 ~~~~i~g~~~~-~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
.++||||+|+. .+.++.++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+
T Consensus 6 ~~~~I~G~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 85 (490)
T 3ju8_A 6 STHYIAGQWLAGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA 85 (490)
T ss_dssp CCEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred cCceECCEEecCCCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999994 45689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHh
Q 010506 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (508)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 179 (508)
++++.|+|||..+++.|+...++.+++++...+...+...+.. .+...+..++|+|||++|+|||||+.+.++++++||
T Consensus 86 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 164 (490)
T 3ju8_A 86 RVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPL-ADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPAL 164 (490)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEE-TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHH
Confidence 9999999999999999999999999999888776655433211 233456679999999999999999999999999999
Q ss_pred hcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhc
Q 010506 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (508)
Q Consensus 180 aaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (508)
++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.+.++.|++||+||+|+||||+.+|+.|++.++++
T Consensus 165 aaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~ 240 (490)
T 3ju8_A 165 LAGNCVVFKPSELTPKVAELT----LKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQ 240 (490)
T ss_dssp HHTCEEEEECCTTCHHHHHHH----HHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTC
T ss_pred HcCCeEEEECCCCCcHHHHHH----HHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhcc
Confidence 999999999999999999876 4567889999999999999889999999999999999999999999999999999
Q ss_pred cCce-eeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEeccc-HHHHHHHHHHhhhhcccCC-CCCCC
Q 010506 260 FGKC-LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESI-YQTVLDQLVDVYKQVKIGD-PLEKG 336 (508)
Q Consensus 260 ~~~~-~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~L~~~~~~~~~g~-p~~~~ 336 (508)
++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |.+++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 9998 7999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHH
Q 010506 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKI 416 (508)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 416 (508)
+++||+++.++++++.+++++++++|+++++||...+.+|+|++|||+.+++++++++||+||||++|++|+|+||||++
T Consensus 321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~ 400 (490)
T 3ju8_A 321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIRE 400 (490)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEECTTCSSCCCCCCCSSEEEEEEESSHHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEEeCCCCccccccccccEEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999987667899999998888899999999999999999999999999999
Q ss_pred hccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010506 417 NNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 417 ~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
+|+++|||+++|||+|.+++++++ .++++|+|+||+++.+..+.+||||+|.||++ ++++|++.|+|++..
T Consensus 401 aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 401 ANATQYGLAAGLLSDSRERFEQFL--VESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp HHCSSCCSEEEEECSCHHHHHHHH--HHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred HhcCCCCceEEEEcCCHHHHHHHH--HhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 999999999999999999999999 78999999999977656678999999999975 478999999998876
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-96 Score=771.61 Aligned_cols=460 Identities=24% Similarity=0.378 Sum_probs=424.8
Q ss_pred CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChh
Q 010506 32 HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP 111 (508)
Q Consensus 32 ~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 111 (508)
+.++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+||+.
T Consensus 4 ~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 82 (474)
T 4h7n_A 4 MTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS- 82 (474)
T ss_dssp CCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-
T ss_pred CCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhhcC-CcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCC
Q 010506 112 EGIGEVQEVIDMCDFAVGLSRQLNG-SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 190 (508)
Q Consensus 112 ~a~~ev~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps 190 (508)
++..|+...++.+++++........ .......+.......++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 83 ~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps 162 (474)
T 4h7n_A 83 ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS 162 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence 4567999999999988877655433 222333344556677899999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCcc
Q 010506 191 PTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGN 270 (508)
Q Consensus 191 ~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~ 270 (508)
+.+|.++..+ .+++.++|+|+|++|+++|+.+.+..|+.| ++.|+||||+.+|+.|++.++++++|+++|+|||
T Consensus 163 ~~tp~~~~~l----~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk 236 (474)
T 4h7n_A 163 EIAPRFVAPL----LMALNTVPELRDVLIFVEGGGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELGGK 236 (474)
T ss_dssp TTSCTTHHHH----HHHHTTCTTTTTTEEECCCCHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCC
T ss_pred ccCchHHHHH----Hhhhhhhcccccceeeccccchhhhhhhhc--cceEEeccccchhhhhhhhhhcccccccccCCCc
Confidence 9999998766 456789999999999999988999999976 8999999999999999999999999999999999
Q ss_pred CeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHH
Q 010506 271 NAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKN 350 (508)
Q Consensus 271 ~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 350 (508)
||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+.++
T Consensus 237 ~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 316 (474)
T 4h7n_A 237 DPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGI 316 (474)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHH
T ss_pred CccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCeEeeCCcccC-CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEE
Q 010506 351 FEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428 (508)
Q Consensus 351 ~~~~v~~a~~~ga~v~~gg~~~~-~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si 428 (508)
+.+++++++++|+++++||...+ .+|+|++|||+ ++++++++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 317 v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v 396 (474)
T 4h7n_A 317 INDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAV 396 (474)
T ss_dssp HHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEE
T ss_pred HHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEE
Confidence 99999999999999999998643 57899999988 79999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHhhcccCcceeEEEEcCCCCCC-CCCCCccCCCCCCCC-CcchHHHHHHhhheeEEEEeCC-CCCC
Q 010506 429 FTRSPENIFKWLGPHGSDTGIVNVNIPTNGA-EIGGAFGGEKATGGG-REAGSDSWKQYMRRSTCTINYG-NELP 500 (508)
Q Consensus 429 ~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfGG~~~SG~g-~~~g~~~~~~~~~~k~v~~~~~-~~~~ 500 (508)
||+|.+++++++ .++++|+|+||+.+... .+..||||+|.||+| +++|.+|+++|++.|+|+++.. .+.|
T Consensus 397 ~t~d~~~a~~~a--~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p 469 (474)
T 4h7n_A 397 FAGSEDEALKVA--RQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDP 469 (474)
T ss_dssp ECSSHHHHHHHH--TTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCT
T ss_pred EeCCHHHHHHHH--HhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCC
Confidence 999999999999 88999999999865433 456899999999998 7899999999999999999864 4455
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-95 Score=817.79 Aligned_cols=472 Identities=30% Similarity=0.497 Sum_probs=441.8
Q ss_pred CCCCCceecCEEecCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHH
Q 010506 18 PETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 18 ~~~~~~~i~g~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
...+++||||+|+.++.+++++||+| ++++++++.++.+++++|+++|++|++.|+.+|.++|.++|+++++.|+++++
T Consensus 529 ~~~~~~~I~G~~~~~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~ 608 (1026)
T 4f9i_A 529 GKTYPLFINGKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLF 608 (1026)
T ss_dssp CEEECEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccccCceECCEEecCCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45788999999998888999999998 88999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHH
Q 010506 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 176 (508)
+|+++++.|+|||..+++.|+..+++.++|++...+.+.+.......++...+..++|+|||++|+|||||+.+.+++++
T Consensus 609 eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a 688 (1026)
T 4f9i_A 609 ELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMAS 688 (1026)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999988877654433323455667789999999999999999999999999
Q ss_pred HHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHH
Q 010506 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (508)
Q Consensus 177 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (508)
+||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.
T Consensus 689 ~ALaaGNtVVlKPse~tplsa~~l----~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~ 764 (1026)
T 4f9i_A 689 AAIVTGNCVVFKPSGITSIIGWHL----VELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIER 764 (1026)
T ss_dssp HHHHTTCEEEEECCGGGHHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCEEEEEcCccchHHHHHH----HHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHH
Confidence 999999999999999999999876 5567889999999999999 67899999999999999999999999999999
Q ss_pred hh------hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhccc
Q 010506 256 VH------QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329 (508)
Q Consensus 256 a~------~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~ 329 (508)
++ ++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|+++++||||+++||+|+++|+++++++++
T Consensus 765 aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 765 AAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred hhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 88 467999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeC
Q 010506 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ 408 (508)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~ 408 (508)
|+|.++++++||+++..+++++.++|++++++| ++++||...+..|+|++|||+ ++++++.+++||+||||++|++|+
T Consensus 845 G~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 923 (1026)
T 4f9i_A 845 GPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923 (1026)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeC
Confidence 999999999999999999999999999999998 999999764445999999988 599999999999999999999999
Q ss_pred CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCC-CCCCCccCCCCCCCCC-cchHHHHHHhh
Q 010506 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGA-EIGGAFGGEKATGGGR-EAGSDSWKQYM 486 (508)
Q Consensus 409 ~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfGG~~~SG~g~-~~g~~~~~~~~ 486 (508)
|+||||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+.+.+. ...+||||+|.||+|+ .+|++++++|+
T Consensus 924 d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~--~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~ 1001 (1026)
T 4f9i_A 924 DFDQAIEWANSTQFALTGGIFSRSPEHLAKAR--REFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFM 1001 (1026)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECCCHHHHHHHH--HHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGE
T ss_pred CHHHHHHHHHcCCCCCeEEEECCCHHHHHHHH--HhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhc
Confidence 99999999999999999999999999999999 78999999999976544 3568999999999995 57899999999
Q ss_pred heeEEEEeCC
Q 010506 487 RRSTCTINYG 496 (508)
Q Consensus 487 ~~k~v~~~~~ 496 (508)
+.|+|++++.
T Consensus 1002 ~~k~v~~~~~ 1011 (1026)
T 4f9i_A 1002 DPRVVTENTM 1011 (1026)
T ss_dssp EEEEEEEECC
T ss_pred eEEEEEEecc
Confidence 9999999875
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-94 Score=767.67 Aligned_cols=464 Identities=22% Similarity=0.304 Sum_probs=415.7
Q ss_pred CCCceecCEEec-CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHH-hHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010506 20 TPGCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-SKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 20 ~~~~~i~g~~~~-~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
++++||||+|+. ++.+++++||+||+++++++.++ +|+++++++|++| |+.|+.++.++|.++|+++++.|++++++
T Consensus 7 ~~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 7 LLKNHVAGQWIAGTGAGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp ECCEEETTEEECCSSSCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhhEECCEEecCCCCeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 367899999983 34679999999999999999998 9999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCC-------cccCCCCCc-eeEEEEeec-ceEEEEeCCCCch
Q 010506 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGS-------VIPSERPNH-MMLETWNPL-GVVGVITAFNFPC 168 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~P~-GVv~~i~p~n~P~ 168 (508)
|++++++|+|||+.+++.|+...++.+++++...+.+.+. ..+...++. ..+..++|+ |||++|+|||||+
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~ 165 (534)
T 2y53_A 86 YYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPS 165 (534)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHH
Confidence 9999999999999999989999999999998877665321 112111222 346788997 9999999999999
Q ss_pred hhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCC-CCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCH
Q 010506 169 AVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK-LPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGST 246 (508)
Q Consensus 169 ~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aG-lP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~ 246 (508)
.++++++++||++||+||+|||+.+|+++..++ +++.++| +|+|++|+|+| +.+.++. .+++|+|+||||+
T Consensus 166 ~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~----~l~~~aG~lP~gvv~vv~g~~~~l~~~---l~~vd~V~FTGS~ 238 (534)
T 2y53_A 166 WGLWEKAAPALLSGVPVIVKPATATAWLTQRMV----ADVVDAGILPPGALSIICGSSAGLLDQ---IRSFDVVSFTGSA 238 (534)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHH----HHHHHHTCSCTTSEEECCSCCTTSGGG---CCTTCEEEEESCH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHH----HHHHHhCCCCCCeEEEEeCChHHHHhc---ccccCEEEEECCH
Confidence 999999999999999999999999999998764 5567899 79999999998 4333332 2679999999999
Q ss_pred HHHHHHHHHhh--hccCceeeccCccCeEEEcCCC-----CHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHH
Q 010506 247 KVGLMVQQTVH--QRFGKCLLELSGNNAIIIMDDA-----DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319 (508)
Q Consensus 247 ~~g~~i~~~a~--~~~~~~~~elgG~~~~iV~~da-----Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~ 319 (508)
.+|+.|++.++ ++++|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++||+|+++
T Consensus 239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 99999998875 7899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-----C-CCCceeccEEE-ecCCC--C
Q 010506 320 LVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI-----E-SEGNFVQPTIV-EISPT--A 390 (508)
Q Consensus 320 L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~-----~-~~g~~~~Ptv~-~~~~~--~ 390 (508)
|+++++++++|||.++++++||+++..+++++.++|+++ .+|+++++||... + ..|+|++|||+ +++++ +
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 999999999999999999999999999999999999999 6899999999742 1 36999999987 67766 6
Q ss_pred cccccccccceeEeEEeC---CH-----HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCc--ceeEEEEcCCCC---
Q 010506 391 DIVKEELFAPVLYVMKFQ---TF-----EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGS--DTGIVNVNIPTN--- 457 (508)
Q Consensus 391 ~~~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~--~~g~V~iN~~~~--- 457 (508)
.+++||+||||++|++|+ |+ ||||+++|+++|||+++|||+|.+++++++ .++ ++|+|+||+++.
T Consensus 398 ~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~~aG~V~vN~~~~~~~ 475 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLA--LELADSHGRVHAISPSVQHS 475 (534)
T ss_dssp STTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHH--HHHTTTEEEEEEECGGGTTT
T ss_pred HHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH--HHHHhhCCEEEEcCCccccc
Confidence 899999999999999999 99 999999999999999999999999999999 778 899999998532
Q ss_pred -----CCCCCCCccCCCCCCCCCc-chHHHHHHhhheeEEEEe
Q 010506 458 -----GAEIGGAFGGEKATGGGRE-AGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 458 -----~~~~~~pfGG~~~SG~g~~-~g~~~~~~~~~~k~v~~~ 494 (508)
...+.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus 476 ~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 476 QTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp CCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred ccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 1245789999999999999 699999999999998763
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-93 Score=747.00 Aligned_cols=444 Identities=21% Similarity=0.275 Sum_probs=393.5
Q ss_pred CCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhh
Q 010506 33 GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE 112 (508)
Q Consensus 33 ~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 112 (508)
-..+++.||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 5 ~~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 84 (457)
T 3lns_A 5 HHHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDV 84 (457)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHH
T ss_pred cccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-hhHHHHHHHHHHHhhhhhhhcCC-cccC--CCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEee
Q 010506 113 GI-GEVQEVIDMCDFAVGLSRQLNGS-VIPS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 188 (508)
Q Consensus 113 a~-~ev~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlk 188 (508)
++ .|+...++.+++++...+..... .... ...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 85 a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlK 164 (457)
T 3lns_A 85 VDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIK 164 (457)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEE
Confidence 98 59999999999998877654332 1111 11234677899999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccC
Q 010506 189 GAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS 268 (508)
Q Consensus 189 ps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elg 268 (508)
||+.+|+++..+++++ .++ +|+|++|+|+|+.+.+..|++ ++||.|+||||+.+|+.|++.++++++|+++|+|
T Consensus 165 ps~~tp~t~~~l~~l~----~~a-lP~gvv~vv~g~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElG 238 (457)
T 3lns_A 165 PSETTPETSAVIEKII----AEA-FAPEYVAVIQGGRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELG 238 (457)
T ss_dssp CCTTCHHHHHHHHHHH----HHH-CCTTTEEECCCCHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECC
T ss_pred CCCCChHHHHHHHHHH----HHh-CCHhhEEEecCCHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECC
Confidence 9999999999886665 445 999999999998889999998 7999999999999999999999999999999999
Q ss_pred ccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHH
Q 010506 269 GNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESR 348 (508)
Q Consensus 269 G~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~ 348 (508)
||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++||+++.+++
T Consensus 239 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~ 313 (457)
T 3lns_A 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQV 313 (457)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHH
T ss_pred CCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987 6665 99999999999
Q ss_pred HHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhcc-CCCCcEE
Q 010506 349 KNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS-VPQGLSS 426 (508)
Q Consensus 349 ~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~ 426 (508)
+++.++++++ ++++++||.. +.+|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+ ++|||++
T Consensus 314 ~rv~~~i~~a---~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a 389 (457)
T 3lns_A 314 QRLVSLLEAT---QGQVLVGSQA-DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAV 389 (457)
T ss_dssp HHHHHHHHHC---CSEEEECCCE-EGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEE
T ss_pred HHHHHHHHhc---CCeEEeCCcc-CCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEE
Confidence 9999999985 3699999976 347999999987 78999999999999999999999999999999999 9999999
Q ss_pred EEecCCHHHHHHhhcccCcceeEEEEcCCCC-CCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010506 427 SIFTRSPENIFKWLGPHGSDTGIVNVNIPTN-GAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 427 si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~-~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
+|||+|.+++++++ .++++|+|+||+++. ...+.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 390 ~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 390 YVFGKDMDVAKGII--NQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp EEECSCHHHHHHHH--HTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred EEECCCHHHHHHHH--HhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEe
Confidence 99999999999999 889999999999753 345679999999999999999999999999999976
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-92 Score=754.11 Aligned_cols=469 Identities=19% Similarity=0.200 Sum_probs=420.2
Q ss_pred hhcCCCCCCCCceecCEEecCCCeEEeecCCCCceEE-EEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHH
Q 010506 12 SEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIA-TVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDA 90 (508)
Q Consensus 12 ~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~g~~i~-~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~ 90 (508)
..+.+.....++||||+|+.+.. ++||+||++++ +++.++.+|+++++++|++|++.|+.++.++|.++|+++++.
T Consensus 21 ~~~~~~~~~~~~~I~G~~~~~~~---v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~ 97 (528)
T 3v4c_A 21 QSMMIFTPKGKHLVAGEWLDGAG---TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADE 97 (528)
T ss_dssp --CCSCCCCCCEEETTEEECCSS---EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHhhhcccccCceECCEEecCCC---ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 34445667788999999996544 99999999998 999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhh--cCCcc----cCC--CCCceeEEEEeecceEEEEe
Q 010506 91 LREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQL--NGSVI----PSE--RPNHMMLETWNPLGVVGVIT 162 (508)
Q Consensus 91 l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~--~~~~~----~~~--~~~~~~~~~~~P~GVv~~i~ 162 (508)
|++++++|+++++.|+|||+.+++.|+...++.+++++...+.. .+... +.. .++...+..++|+|||++|+
T Consensus 98 l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 177 (528)
T 3v4c_A 98 IEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFG 177 (528)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEEC
T ss_pred HHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEEC
Confidence 99999999999999999999999999999999999999887652 22111 111 12234677899999999999
Q ss_pred CCCCchhhhH--HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCE
Q 010506 163 AFNFPCAVLG--WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISL 239 (508)
Q Consensus 163 p~n~P~~~~~--~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~ 239 (508)
|||||+.+.+ +++++||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+| +.+.++.|++||+||+
T Consensus 178 PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~ 257 (528)
T 3v4c_A 178 ASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKA 257 (528)
T ss_dssp CSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCE
T ss_pred CCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCE
Confidence 9999999855 899999999999999999999999999999999999999999999999999 7789999999999999
Q ss_pred EEEeCCHHHHHHHHHHhhhcc--CceeeccCccCeEEEcCCC---CHHHHHHHHHHHHHhhcCCCcCCCceEEEecc-cH
Q 010506 240 VSFTGSTKVGLMVQQTVHQRF--GKCLLELSGNNAIIIMDDA---DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHES-IY 313 (508)
Q Consensus 240 v~ftGs~~~g~~i~~~a~~~~--~~~~~elgG~~~~iV~~da---Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-i~ 313 (508)
|+||||+.+|+.|++.+++++ +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +|
T Consensus 258 V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~ 337 (528)
T 3v4c_A 258 VGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA 337 (528)
T ss_dssp EEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH
T ss_pred EEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH
Confidence 999999999999999999999 9999999999999999999 88999999999999999999999999999997 99
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCC---
Q 010506 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPT--- 389 (508)
Q Consensus 314 ~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~--- 389 (508)
|+|+++|+++++++++ ++.+||+++..+.+++.++++ ++|+++++||.. .|+|++|||+ +++++
T Consensus 338 d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 338 DRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCccccc
Confidence 9999999999998864 367889988777777666653 379999999975 7999999988 46666
Q ss_pred CcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecC--CHHHHHHhhcccCcc--eeEEEEcCCCCC--CCCCC
Q 010506 390 ADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR--SPENIFKWLGPHGSD--TGIVNVNIPTNG--AEIGG 463 (508)
Q Consensus 390 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~--d~~~~~~~~~~~~~~--~g~V~iN~~~~~--~~~~~ 463 (508)
+.+++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++ .+++ +|+|+||+++.. ..+.+
T Consensus 406 ~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a--~~l~~~aG~V~vN~~~~~~~~~~~~ 483 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLR--PVLERKAGRVLVNGFPTGVEVVDSM 483 (528)
T ss_dssp CGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHH--HHHHHHEEEEEESSCTTCCCCSTTC
T ss_pred ChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHH--HHHhhcCcEEEEcCCCCCCccCCCC
Confidence 899999999999999999999999999999999999999999 889999999 7787 999999996543 34678
Q ss_pred CccC-CCCCCCCCcc--hHHHHHHhhheeEEEEeCCCC
Q 010506 464 AFGG-EKATGGGREA--GSDSWKQYMRRSTCTINYGNE 498 (508)
Q Consensus 464 pfGG-~~~SG~g~~~--g~~~~~~~~~~k~v~~~~~~~ 498 (508)
|||| +|.||+|+++ |++|+++|++.|+ +.++|..
T Consensus 484 pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~-~q~~p~~ 520 (528)
T 3v4c_A 484 VHGGPYPASTNFGATSVGTMSIRRFLRPVA-YQNMPED 520 (528)
T ss_dssp CCCCTTTTBSCTTCCSSSGGGGGGGEEEEE-EESCCGG
T ss_pred CCCCCCCCCCCCCCCCCcHHHHHHhchhHH-hhcCCcc
Confidence 9999 9999999986 9999999999986 4667654
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-91 Score=734.56 Aligned_cols=430 Identities=21% Similarity=0.336 Sum_probs=389.1
Q ss_pred cCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhh
Q 010506 51 VEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVG 129 (508)
Q Consensus 51 ~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~ 129 (508)
...+.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++ .|+...++.+++++.
T Consensus 13 ~~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 13 RGSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp -----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4556779999999999999999999999999999999999999999999999999999999997 599888888888766
Q ss_pred hhhhhcCC-ccc--CCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHH
Q 010506 130 LSRQLNGS-VIP--SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSE 206 (508)
Q Consensus 130 ~~~~~~~~-~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~ 206 (508)
..+..... ... ........++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..++++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l--- 169 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATI--- 169 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHH---
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHH---
Confidence 54432211 110 011234577889999999999999999999999999999999999999999999999887655
Q ss_pred HHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHH
Q 010506 207 VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVR 286 (508)
Q Consensus 207 ~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~ 286 (508)
+.++ +|+|++|+|+|+.+.+..|+.| ++|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++
T Consensus 170 -~~~a-lP~gvv~vv~g~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~ 246 (469)
T 3sza_A 170 -IPQY-LDKDLYPVINGGVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACR 246 (469)
T ss_dssp -HHHH-SCTTTSCBCCCSHHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHH
T ss_pred -HHHh-CCcceEEEEECCHHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHH
Confidence 4556 9999999999976667778887 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEe
Q 010506 287 SVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366 (508)
Q Consensus 287 ~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~ 366 (508)
.+++++|.|+||.|++++|||||+++||+|+++|+++++++ .|+|.++++++||+++.++++++.+++ +|++++
T Consensus 247 ~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~ 320 (469)
T 3sza_A 247 RIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVA 320 (469)
T ss_dssp HHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEE
T ss_pred HHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEE
Confidence 99999999999999999999999999999999999999988 599999999999999999999999988 689999
Q ss_pred eCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCc
Q 010506 367 TGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGS 445 (508)
Q Consensus 367 ~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~ 445 (508)
+||.. +..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++ .++
T Consensus 321 ~GG~~-~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l 397 (469)
T 3sza_A 321 YGGTG-DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMI--AET 397 (469)
T ss_dssp ECCCE-ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHH--HHC
T ss_pred eCCcc-CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHH--HhC
Confidence 99986 457999999987 79999999999999999999999999999999999999999999999999999999 789
Q ss_pred ceeEEEEcCCCC-CCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010506 446 DTGIVNVNIPTN-GAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 446 ~~g~V~iN~~~~-~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
++|+|+||+... ...+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 398 ~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 398 SSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp CCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred CcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 999999999753 34567899999999999999999999999999999874
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-89 Score=726.06 Aligned_cols=444 Identities=19% Similarity=0.259 Sum_probs=403.9
Q ss_pred CCCeEEeecCCCCceE-EEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh
Q 010506 32 HGPTVSSINPVNNQKI-ATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL 110 (508)
Q Consensus 32 ~~~~~~v~~P~~g~~i-~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 110 (508)
++.+++++||+||+++ ++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+|||+
T Consensus 5 ~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 84 (510)
T 1ez0_A 5 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPE 84 (510)
T ss_dssp CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 4568999999999999 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhh--hcCCcc----cCCCC-C-ceeEEEEeecceEEEEeCCCCchhhh--HHHHHHHhh
Q 010506 111 PEGIGEVQEVIDMCDFAVGLSRQ--LNGSVI----PSERP-N-HMMLETWNPLGVVGVITAFNFPCAVL--GWNACIALV 180 (508)
Q Consensus 111 ~~a~~ev~~~~~~~~~~~~~~~~--~~~~~~----~~~~~-~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l~~ALa 180 (508)
.+++.|+...++.+++++...+. ..+... +...+ + ...+..++|+|||++|+|||||+.+. .+++++||+
T Consensus 85 ~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALa 164 (510)
T 1ez0_A 85 VRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALA 164 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHH
Confidence 99999999999999999887764 222211 11111 1 13567899999999999999999984 499999999
Q ss_pred cCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhc
Q 010506 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (508)
Q Consensus 181 aGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (508)
+||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+| +.+.++.|++||+||+|+||||+.+|+.|++.++++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 244 (510)
T 1ez0_A 165 AGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER 244 (510)
T ss_dssp HTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHS
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999 788999999999999999999999999999999988
Q ss_pred c--CceeeccCccCeEEEcCCCCHH--HHHHHHHHHHHhhcCCCcCCCceEEEecc-cHHHHHHHHHHhhhhcccCCCCC
Q 010506 260 F--GKCLLELSGNNAIIIMDDADIK--LAVRSVLFAAVGTAGQRCTTCRRLLIHES-IYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 260 ~--~~~~~elgG~~~~iV~~daDl~--~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
+ +|+++|+|||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++++
T Consensus 245 l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~----- 319 (510)
T 1ez0_A 245 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP----- 319 (510)
T ss_dssp SSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC-----
T ss_pred CCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC-----
Confidence 6 9999999999999999999999 99999999999999999999999999999 999999999999998874
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCCCCceeccEEE-ecCCC---CcccccccccceeEeEEeCC
Q 010506 335 KGTLLGPLHTPESRKNFEKGIENIKS-QGGKILTGGSVIESEGNFVQPTIV-EISPT---ADIVKEELFAPVLYVMKFQT 409 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~-~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~---~~~~~~E~fgPvl~v~~~~~ 409 (508)
||++++.+.+++.++++++++ +|+++++||. +|+|++|||+ +++++ +.+++||+||||++|++|+|
T Consensus 320 -----gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~ 390 (510)
T 1ez0_A 320 -----STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCEN 390 (510)
T ss_dssp -----BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESS
T ss_pred -----CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCC
Confidence 588899999999999999984 7999999996 2899999988 56566 89999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEecCCH--HHHHHhhcccCc--ceeEEEEcCCCCC--CCCCCCccC-CCCCCCCCc--chHH
Q 010506 410 FEEAVKINNSVPQGLSSSIFTRSP--ENIFKWLGPHGS--DTGIVNVNIPTNG--AEIGGAFGG-EKATGGGRE--AGSD 480 (508)
Q Consensus 410 ~~eai~~~n~~~~gl~~si~s~d~--~~~~~~~~~~~~--~~g~V~iN~~~~~--~~~~~pfGG-~~~SG~g~~--~g~~ 480 (508)
+||||+++|+++|||++||||+|. +++++++ .++ ++|+|+||+++.. ..+.+|||| +|.||+|+. +|.+
T Consensus 391 ~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~--~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~ 468 (510)
T 1ez0_A 391 VADMLSLSEMLAGSLTATIHATEEDYPQVSQLI--PRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAE 468 (510)
T ss_dssp HHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHH--HHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGG
T ss_pred HHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHH--HHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHH
Confidence 999999999999999999999987 7899998 667 7999999986542 235789999 799998854 7999
Q ss_pred HHHHhhheeEE
Q 010506 481 SWKQYMRRSTC 491 (508)
Q Consensus 481 ~~~~~~~~k~v 491 (508)
++++|++.|++
T Consensus 469 gl~~~~~~k~~ 479 (510)
T 1ez0_A 469 AIHRWLRPVAY 479 (510)
T ss_dssp GGGGGEEEEEE
T ss_pred HHHHhheEEEE
Confidence 99999998865
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-87 Score=744.49 Aligned_cols=437 Identities=27% Similarity=0.420 Sum_probs=403.8
Q ss_pred EcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhh
Q 010506 50 VVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVG 129 (508)
Q Consensus 50 v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~ 129 (508)
++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|+++.++|+++++.|+|||+.+++.|+..+++.++|++.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCcc-cCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHH
Q 010506 130 LSRQLNGSVI-PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208 (508)
Q Consensus 130 ~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l 208 (508)
..+...+... .....+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..++ +++
T Consensus 624 ~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~----ell 699 (1001)
T 3haz_A 624 QGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAV----ALL 699 (1001)
T ss_dssp HHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHH----HHH
T ss_pred HHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHH----HHH
Confidence 8877654321 12223456778899999999999999999999999999999999999999999999998774 556
Q ss_pred HhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhc---cCceeeccCccCeEEEcCCCCHHHHH
Q 010506 209 ERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR---FGKCLLELSGNNAIIIMDDADIKLAV 285 (508)
Q Consensus 209 ~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~---~~~~~~elgG~~~~iV~~daDl~~aa 285 (508)
.++|+|+|++|+|+|+...+..|++||+|++|+||||+.+|+.|++.++++ ++|+++|+|||||+||++|||++.|+
T Consensus 700 ~eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 700 HEAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HHhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 788999999999999443399999999999999999999999999998864 79999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeE
Q 010506 286 RSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI 365 (508)
Q Consensus 286 ~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v 365 (508)
+.+++|+|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++..+.+++.+++++++++| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888 88
Q ss_pred eeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCC--HHHHHHHhccCCCCcEEEEecCCHHHHHHhhccc
Q 010506 366 LTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQT--FEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPH 443 (508)
Q Consensus 366 ~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~ 443 (508)
+||.. +..|+|++|||+.. +++.+++||+||||++|++|++ ++|||+++|+++|||+++|||+|.+.+++++ .
T Consensus 859 -~gg~~-~~~G~fv~PTvl~~-~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a--~ 933 (1001)
T 3haz_A 859 -HFAGP-APEGCFVAPHIFEL-TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAII--D 933 (1001)
T ss_dssp -EEECC-CCSSSCCCCEEEEC-SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHH--H
T ss_pred -ecccc-CCCCcEEeeEEecC-CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHH--H
Confidence 88876 44699999999975 6788999999999999999986 8999999999999999999999999999999 7
Q ss_pred CcceeEEEEcCCCCCCC-CCCCccCCCCCCCC-CcchHHHHHHhhheeEEEEeCC
Q 010506 444 GSDTGIVNVNIPTNGAE-IGGAFGGEKATGGG-REAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 444 ~~~~g~V~iN~~~~~~~-~~~pfGG~~~SG~g-~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
++++|+|+||+++.+.. ..+||||+|.||+| +.+|++++++|++.|+|++++.
T Consensus 934 ~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~~ 988 (1001)
T 3haz_A 934 RVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINTA 988 (1001)
T ss_dssp HCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEECG
T ss_pred hCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECCc
Confidence 89999999999765443 45799999999999 5678999999999999999874
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-83 Score=666.83 Aligned_cols=410 Identities=17% Similarity=0.153 Sum_probs=338.3
Q ss_pred EeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHh-------CCC
Q 010506 37 SSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEM-------GKI 109 (508)
Q Consensus 37 ~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------Gk~ 109 (508)
-++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 699
Q ss_pred hh----hhhhhHHHHHHHHHHHhhhhhhhcCCcccCC--CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCC
Q 010506 110 LP----EGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGN 183 (508)
Q Consensus 110 ~~----~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN 183 (508)
.. +++.|+..+++.+++++...+...+...+.. .++...+..++|+|||++|+||| |.+.. +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 87 5678999999999999977665555432211 12335678899999999999887 87766 89999999999
Q ss_pred EEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCce
Q 010506 184 CVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263 (508)
Q Consensus 184 ~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~ 263 (508)
+||+|||+.+|+++..+++++.++|.++| |+|++|+|+|+.++++.|++||+||+|+||||+.+|+.|++.++ ++|+
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv 244 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPV 244 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCB
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCE
Confidence 99999999999999999999999988889 99999999997778999999999999999999999999999887 8999
Q ss_pred eeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCC
Q 010506 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLH 343 (508)
Q Consensus 264 ~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~ 343 (508)
++|+|||||+||++|||++.|++.+++++|.| ||.|++++|||||+++|| ||+
T Consensus 245 ~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p~- 297 (463)
T 2h5g_A 245 MGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TPL- 297 (463)
T ss_dssp CSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SHH-
T ss_pred EEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hHH-
Confidence 99999999999999999999999999999999 999999999999999998 232
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCC
Q 010506 344 TPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQG 423 (508)
Q Consensus 344 ~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 423 (508)
+++++++++++|++++.|+.. ...|+|+ ++++.+++||+||||++|++|+|+||||+++|+++||
T Consensus 298 -------~~~~i~~~~~~Ga~v~~G~~~-~~~g~~~-------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~g 362 (463)
T 2h5g_A 298 -------FDQIIDMLRVEQVKIHAGPKF-ASYLTFS-------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSS 362 (463)
T ss_dssp -------HHHHHHHHHHTTCEEEECHHH-HC----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCS
T ss_pred -------HHHHHHHHHhCCCEEEeCCcc-cccCccC-------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCC
Confidence 233577888899999855432 2345554 4689999999999999999999999999999999999
Q ss_pred cEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC--Cc--chHHHHHHhhheeEEEEeCC
Q 010506 424 LSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG--RE--AGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 424 l~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g--~~--~g~~~~~~~~~~k~v~~~~~ 496 (508)
|+++|||+|.+++++++ .++++|+|+||+++. ..+.+||||+|.||+| ++ +|.+++++|++.|+|+++..
T Consensus 363 Laa~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~ 436 (463)
T 2h5g_A 363 HTDVIVTEDENTAEFFL--QHVDSACVFWNASTR-FSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD 436 (463)
T ss_dssp SEEEEECSCHHHHHHHH--HHCCSSEEEESSCGG-GCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS
T ss_pred ceEEEEeCCHHHHHHHH--HhCCeeEEEEeCCcc-CCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC
Confidence 99999999999999999 789999999998654 3467999999999999 65 89999999999999998764
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-82 Score=663.65 Aligned_cols=428 Identities=15% Similarity=0.172 Sum_probs=376.9
Q ss_pred EEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh-hHHHHHHHHHHH
Q 010506 49 TVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFA 127 (508)
Q Consensus 49 ~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~ 127 (508)
.++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+||+..+++. +....++.+..+
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~ 84 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNY 84 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHh
Confidence 4556788999999999999999999999999999999999999999999999999999999988753 333344433332
Q ss_pred hhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHH
Q 010506 128 VGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (508)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~ 207 (508)
. +...........++...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++|.++
T Consensus 85 ~---~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~ 161 (464)
T 3k9d_A 85 I---KDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEA 161 (464)
T ss_dssp H---TTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred h---hcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHH
Confidence 2 2211111111123446678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccC-ccCeEEEcCCCCHHHHH
Q 010506 208 FERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS-GNNAIIIMDDADIKLAV 285 (508)
Q Consensus 208 l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elg-G~~~~iV~~daDl~~aa 285 (508)
+.++|+|+|++|+|+| +.+.++.|++||+||+|+||||+. +++.++++++|+ +|+| ||+|+||++|||++.|+
T Consensus 162 ~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa 236 (464)
T 3k9d_A 162 AEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAV 236 (464)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHH
T ss_pred HHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHH
Confidence 9999999999999999 789999999999999999999998 456677788998 7888 99999999999999999
Q ss_pred HHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhh-------hhcccCCCC-CCCCccCCCCCHHHHHHHHHHHHH
Q 010506 286 RSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVY-------KQVKIGDPL-EKGTLLGPLHTPESRKNFEKGIEN 357 (508)
Q Consensus 286 ~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~-------~~~~~g~p~-~~~~~~gpl~~~~~~~~~~~~v~~ 357 (508)
+.|++|+|+|+||.|+++++||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.++++.
T Consensus 237 ~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~ 316 (464)
T 3k9d_A 237 KHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGL 316 (464)
T ss_dssp HHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999986 456788887 678999999999999999999998
Q ss_pred HHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHH----HHhccCCCCcEEEEecCCH
Q 010506 358 IKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAV----KINNSVPQGLSSSIFTRSP 433 (508)
Q Consensus 358 a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~si~s~d~ 433 (508)
++.+|+++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+++|||+|.
T Consensus 317 a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~ 382 (464)
T 3k9d_A 317 TVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDK 382 (464)
T ss_dssp CCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred hhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCH
Confidence 88889999999864 355677755 89999999999999999997 7999999999999999999
Q ss_pred HHHHHhhcccCcceeEEEEcCCCCC--------CCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeCCCCCCC
Q 010506 434 ENIFKWLGPHGSDTGIVNVNIPTNG--------AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGNELPL 501 (508)
Q Consensus 434 ~~~~~~~~~~~~~~g~V~iN~~~~~--------~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~~~~~ 501 (508)
+++++++ .++++|+|+||+++.+ ..+.+|||| |.+|.|+++|..++++|++.|+|....+...++
T Consensus 383 ~~a~~~~--~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~~~~~~ 455 (464)
T 3k9d_A 383 EIIREFA--LKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVLELEDI 455 (464)
T ss_dssp HHHHHHH--HHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCCCHHHH
T ss_pred HHHHHHH--HhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCCchhhh
Confidence 9999999 7899999999997642 457899999 889999999999999999999998877654433
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-80 Score=648.30 Aligned_cols=400 Identities=18% Similarity=0.194 Sum_probs=325.2
Q ss_pred HHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh----hhhh-hhHHH-HHHHHHHHhhh
Q 010506 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL----PEGI-GEVQE-VIDMCDFAVGL 130 (508)
Q Consensus 57 ~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~-~ev~~-~~~~~~~~~~~ 130 (508)
.+++++++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+|||. .+++ .|+.. .++.+++++..
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999998 8875 78888 77888888876
Q ss_pred hhhhc------CCcccCC-C-CCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHH
Q 010506 131 SRQLN------GSVIPSE-R-PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202 (508)
Q Consensus 131 ~~~~~------~~~~~~~-~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~ 202 (508)
.+... +...+.. . .+...+..++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 66544 2221211 1 1334578899999999999999 9 9999999999999999999999999999999999
Q ss_pred HHHHHHHh----CCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCC
Q 010506 203 LVSEVFER----NKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (508)
Q Consensus 203 ~l~~~l~~----aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~d 278 (508)
++.++|.+ +|+|+|++|+|+++.++++.|.+||+||.|+||||+.+|+.|++.+ .+|+++|+|||||+||++|
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~d 249 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDED 249 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECTT
T ss_pred HHHHHHHhhchhcCCCCCcEEEECCHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECCC
Confidence 99988899 9999999999993337899999999999999999999999999887 6999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhccc---CCCCCCCCccCCCCCHHHHHHHHHH-
Q 010506 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI---GDPLEKGTLLGPLHTPESRKNFEKG- 354 (508)
Q Consensus 279 aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~~~~- 354 (508)
||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |||.+ .++
T Consensus 250 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~ 310 (468)
T 1vlu_A 250 ADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAY 310 (468)
T ss_dssp CCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHH
T ss_pred CCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hccc
Confidence 9999999999999999999 99999999999999 9999999999999987 76633 334
Q ss_pred HHHHHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHH
Q 010506 355 IENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434 (508)
Q Consensus 355 v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~ 434 (508)
++++. ++++||. | ++||++ +++++.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 311 i~~a~----~~~~gG~-----g--~~Ptvl-v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 378 (468)
T 1vlu_A 311 FDKLN----ELGKLTE-----A--IQCKTV-DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKA 378 (468)
T ss_dssp HHHHH----HHTCCCH-----H--HHTTBC--------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHH
T ss_pred ccccc----eeeccCC-----C--CCCcee-eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHH
Confidence 55554 4677775 4 689877 8889999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCcceeEEEEcCCCCCCCCCCCcc-----CCCCCCCCCcchHHHHHHhhheeEEEEeCC
Q 010506 435 NIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFG-----GEKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 435 ~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfG-----G~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
++++++ .++++|+|+||+++. ..++.||| |+|.||+|++ |.+++++|++.|+|+++..
T Consensus 379 ~a~~~~--~~l~aG~V~vN~~~~-~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~~ 441 (468)
T 1vlu_A 379 NAEKFM--KGVDSSGVYWNASTR-FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGDG 441 (468)
T ss_dssp HHHHHH--HHCCCSEEEESSCGG-GCC-----------------------CCSGGGEEEEEEEECSS
T ss_pred HHHHHH--HhCCeeEEEEcCCCC-CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECCC
Confidence 999999 789999999998654 34578999 9999999999 9999999999999998753
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-77 Score=623.32 Aligned_cols=390 Identities=22% Similarity=0.299 Sum_probs=343.8
Q ss_pred HHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh----hhhh--------hhHHHHHH
Q 010506 55 LEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL----PEGI--------GEVQEVID 122 (508)
Q Consensus 55 ~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~ev~~~~~ 122 (508)
.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+||+. .+++ .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999986 5553 58999999
Q ss_pred HHHHHhhhhhhhcCCcccCC--CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHH
Q 010506 123 MCDFAVGLSRQLNGSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200 (508)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l 200 (508)
.+++++.+.+. .+...+.. ..+...+..++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++..+
T Consensus 93 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l 169 (427)
T 1o20_A 93 ACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAI 169 (427)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHH
Confidence 99999876654 23222211 12334678899999999999875 478999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCeEEEecC-C-hhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCC
Q 010506 201 TKLVSEVFERNKLPGAIFTSFCG-G-AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (508)
Q Consensus 201 ~~~l~~~l~~aGlP~g~~~~v~g-~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~d 278 (508)
++++.++|.++|+|+|++|+|+| + .+.++.|.+||+||.|+||||+.+|+.|++.+ .+|+++|+|||||+||++|
T Consensus 170 ~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~d 246 (427)
T 1o20_A 170 VSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDES 246 (427)
T ss_dssp HHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCC
Confidence 99999999999999999999998 5 45788899999999999999999999999887 5999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHH
Q 010506 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENI 358 (508)
Q Consensus 279 aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a 358 (508)
||++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 247 ADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 297 (427)
T 1o20_A 247 ADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE---------------------------- 297 (427)
T ss_dssp SCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE----------------------------
T ss_pred CCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe----------------------------
Confidence 9999999999999999999 99999999999999999999999999987652
Q ss_pred HHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHH
Q 010506 359 KSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438 (508)
Q Consensus 359 ~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~ 438 (508)
+.||... .+ |+ ||| +++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 298 -------~~gg~~~--~~-~~-Ptl--~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 364 (427)
T 1o20_A 298 -------VRGCEKT--RE-IV-PDV--VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKK 364 (427)
T ss_dssp -------EEECHHH--HH-HS-TTS--EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHH
T ss_pred -------eecChhh--hh-hC-Ccc--cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHH
Confidence 1222211 12 33 886 34568899999999999999999999999999999999999999999999999
Q ss_pred hhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC----CcchHHHHHHhhheeEEEEeC
Q 010506 439 WLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG----REAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 439 ~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g----~~~g~~~~~~~~~~k~v~~~~ 495 (508)
++ .++++|+|+||++.. ..+..||||.|.||+| +++|.+++++|++.|+|+++.
T Consensus 365 ~~--~~l~~G~V~iN~~~~-~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 365 FV--SEIDAAAVYVNASTR-FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HH--HHCCSSEEEESSCGG-GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HH--HhCCccEEEECCCCc-cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 99 789999999998654 3467899999999997 467999999999999998875
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-77 Score=623.18 Aligned_cols=392 Identities=17% Similarity=0.203 Sum_probs=334.5
Q ss_pred HHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh----hhhh--------hhHHHHHH
Q 010506 55 LEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL----PEGI--------GEVQEVID 122 (508)
Q Consensus 55 ~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~ev~~~~~ 122 (508)
.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++|+++++.|+||+. .+++ .++..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999985 3554 37888899
Q ss_pred HHHHHhhhhhhhcCCcccC--CCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHH
Q 010506 123 MCDFAVGLSRQLNGSVIPS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200 (508)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l 200 (508)
.+++++.+.+.. +...+. ...+...+..++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus 105 ~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 999988776533 222221 113446678899999999999998 8 68899999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCeEEEecC-Ch-hhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCC
Q 010506 201 TKLVSEVFERNKLPGAIFTSFCG-GA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (508)
Q Consensus 201 ~~~l~~~l~~aGlP~g~~~~v~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~d 278 (508)
++++.++|.++|+|+|++|+|+| +. +.++.|.+||+||.|+||||+.+|+.|++.+ ++|+++|+|||||+||++|
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~d 258 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDR 258 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCC
Confidence 99999999999999999999998 55 5788888999999999999999999998876 6999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhccc---CCCCCCCCccCCCCCHHHHHHHHHHH
Q 010506 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI---GDPLEKGTLLGPLHTPESRKNFEKGI 355 (508)
Q Consensus 279 aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (508)
||++.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |+|.+ .+++
T Consensus 259 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~-----------------~~~i 320 (444)
T 4ghk_A 259 ASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADA-----------------RAVL 320 (444)
T ss_dssp CCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHHH-----------------HHHH
T ss_pred CCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHHH-----------------HHHH
Confidence 9999999999999999999 9999999999999999999999999999887 65421 3445
Q ss_pred HHHHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHH
Q 010506 356 ENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435 (508)
Q Consensus 356 ~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~ 435 (508)
+++. . | + .+++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 321 ~~a~-~--------------G------~-~~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 378 (444)
T 4ghk_A 321 EAAG-V--------------G------P-LVDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDR 378 (444)
T ss_dssp HHTT-C--------------C------C-CEECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHH
T ss_pred Hhcc-c--------------C------c-ccCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHH
Confidence 5431 1 1 1 134578999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC----CcchHHHHHHhhheeEEEEeC
Q 010506 436 IFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG----REAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 436 ~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g----~~~g~~~~~~~~~~k~v~~~~ 495 (508)
+++++ .++++|+|+||+++.. .+..||||.+.||+| +++|.+++++||+.|+|+++.
T Consensus 379 a~~~a--~~l~aG~V~vN~~~~~-~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 379 AMRFL--REVDSASVMVNASTRF-ADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp HHHHH--HHCCSSEEEEEECGGG-CSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred HHHHH--HhCCcceEEEcCCCcc-CCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 99999 7899999999997643 467899999999988 678999999999999999875
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-77 Score=624.39 Aligned_cols=418 Identities=19% Similarity=0.213 Sum_probs=345.8
Q ss_pred EcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh-hHHHHHHHH-HHH
Q 010506 50 VVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMC-DFA 127 (508)
Q Consensus 50 v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~-~~~ 127 (508)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++. ++...++.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 467889999999999999999999999999999999999999999999999999999999999875 666666655 333
Q ss_pred hhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHH
Q 010506 128 VGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (508)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~ 207 (508)
... ...+. . ...++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 81 ~~~--~~~g~-~-~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KDE--QTCGI-L-EEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TTC--CCSEE-C--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhc--ccccc-c-cCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 321 11111 1 1122335678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHH
Q 010506 208 FERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVR 286 (508)
Q Consensus 208 l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~ 286 (508)
+.++|+|+|++|+|+| +.+.++.|++||+|++|+||||+.++ +.++++++|+++|+|||+|+||++|||++.|++
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~ 232 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKRAVA 232 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHHHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHH
Confidence 9999999999999999 78999999999999999999999854 456678999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEe
Q 010506 287 SVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366 (508)
Q Consensus 287 ~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~ 366 (508)
.|++|+|+|+||.|+++++||||+++||+|+++|+++ +||+++.++.+++.++++.+...|+++
T Consensus 233 ~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v- 296 (452)
T 3my7_A 233 SVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI- 296 (452)
T ss_dssp HHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-
T ss_pred HHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-
Confidence 9999999999999999999999999999999999875 389999999999999998765567776
Q ss_pred eCCccc---CCCCceeccEE-------E-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCC----CCcEEEEecC
Q 010506 367 TGGSVI---ESEGNFVQPTI-------V-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVP----QGLSSSIFTR 431 (508)
Q Consensus 367 ~gg~~~---~~~g~~~~Ptv-------~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~si~s~ 431 (508)
+||... +..|+|++||+ + ++++++++.+ |+||||++|++|+|+||||+++|++. |||+++|||+
T Consensus 297 ~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~ 375 (452)
T 3my7_A 297 VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTN 375 (452)
T ss_dssp TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESC
T ss_pred ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcC
Confidence 476542 13699999995 3 4677888775 89999999999999999999999974 9999999999
Q ss_pred CHHHHHH---hhcccCcceeEEEEcCCCCCCCCCC------C---ccCCCCCCCCCcchHHHHHHhhheeEEEEe
Q 010506 432 SPENIFK---WLGPHGSDTGIVNVNIPTNGAEIGG------A---FGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 432 d~~~~~~---~~~~~~~~~g~V~iN~~~~~~~~~~------p---fGG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 494 (508)
|.+.+++ ++ .++++|+|+||+++.+...+. + .-|++..|.+...+..+.++|++.|+|..+
T Consensus 376 d~~~a~~i~~~a--~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~~ 448 (452)
T 3my7_A 376 QDVNADRIRYFG--DKMKTARILINIPTTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKR 448 (452)
T ss_dssp TTTCHHHHHHHH--HHCCCSEEEESCCCC----------------------------CCCCCGGGGEEEEEEECC
T ss_pred CHHHHHHHHHHH--HhCCEEEEEECCCCCCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEee
Confidence 9887777 88 789999999999765321111 0 014455566666677788999999998654
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.058 Score=53.85 Aligned_cols=342 Identities=16% Similarity=0.153 Sum_probs=174.1
Q ss_pred HhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHh-CCC------hhhhhhhHHHH--------HHHHHHHhhhh----
Q 010506 71 IWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEM-GKI------LPEGIGEVQEV--------IDMCDFAVGLS---- 131 (508)
Q Consensus 71 ~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-Gk~------~~~a~~ev~~~--------~~~~~~~~~~~---- 131 (508)
.|+..+..+-.+..+.+.+.++++-|+-....++.. |.. +.-...|++.+ .+.++......
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l~~~~~~ai~~A~~~I~~fh 105 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQALPAEQAKALREAAERIRAYA 105 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 355555666666677777777777666555555543 211 11111222211 12222222211
Q ss_pred hhhcC-CcccCCCCCceeEEEEeecceEEEEeCCC---CchhhhHHHHHHHhhcCCE--EEeeCCCCChhHHHHHHHHHH
Q 010506 132 RQLNG-SVIPSERPNHMMLETWNPLGVVGVITAFN---FPCAVLGWNACIALVCGNC--VVWKGAPTTPLITIAITKLVS 205 (508)
Q Consensus 132 ~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~l~~ALaaGN~--VVlkps~~~~~~~~~l~~~l~ 205 (508)
+.... .......++.....++.|+--|++..|.- ||-. ++....||-.+|.. |+.-|.+........+
T Consensus 106 ~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL----- 179 (423)
T 4gic_A 106 ERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSS-VLMNAVPAKVAGVPELIMAVPAPRGELNALVL----- 179 (423)
T ss_dssp HHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHH-HHHHHHHHHHHTCSEEEEECCCGGGCCCHHHH-----
T ss_pred HhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhH-HHHhhccHHHhCCCeEEEecCCCCCCccHHHH-----
Confidence 11211 11122334556667889999999999944 7754 44578899999985 3445543211111111
Q ss_pred HHHHhCCCCCCeEEEec-CChhhHHHHHc----CCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccC-ccCe--EEEcC
Q 010506 206 EVFERNKLPGAIFTSFC-GGAEIGQAIAK----DPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS-GNNA--IIIMD 277 (508)
Q Consensus 206 ~~l~~aGlP~g~~~~v~-g~~~~~~~L~~----~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elg-G~~~--~iV~~ 277 (508)
-+...+|+-+ +.. ||.+.-.+|.- -|.||.|+=.|..=+..+=.... ..+-..+- |.+= +|-++
T Consensus 180 ~AA~l~Gv~e----Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~----g~VgIDm~AGPSEilViAD~ 251 (423)
T 4gic_A 180 AAAYISGVDR----VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF----GQVGIDMVAGPSEILVISDG 251 (423)
T ss_dssp HHHHHHTCCE----EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB----TTBEECCCCCCCEEEEEECS
T ss_pred HHHHhcCCcE----EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc----CCcCcccccccceEEEEeCC
Confidence 1234556533 332 56666666653 67899999888876543322221 22222221 3333 34444
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHH
Q 010506 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN 357 (508)
Q Consensus 278 daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~ 357 (508)
++|.+..+..++.-+=... . .+.++|..+ ++|.+++.+.+.+..-.-| . .+.. ..
T Consensus 252 ~a~p~~vAaDLlsQAEHd~----~-a~~iLvT~s--~~la~~V~~~i~~~l~~l~-----------r---~~i~----~~ 306 (423)
T 4gic_A 252 RTDPDWIAMDLFSQAEHDE----D-AQAILISPD--AAHLEAVQASIERLLPGME-----------R---AEVI----RT 306 (423)
T ss_dssp CSCHHHHHHHHHHHHTTCT----T-CEEEEEESC--HHHHHHHHHHHHHHGGGCT-----------T---HHHH----HH
T ss_pred CCCHHHHHHHHHHhhccCC----C-CeEEEEeCc--HHHHHHHHHHHHHHHhhCc-----------c---HHHH----HH
Confidence 6899998888876543332 2 345666555 3455555554443211100 1 1111 11
Q ss_pred HHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHH
Q 010506 358 IKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIF 437 (508)
Q Consensus 358 a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~ 437 (508)
+..+ +| .++.++|++|+++++|..-.= -.-|.++|.+...
T Consensus 307 sl~~------------------------------------~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~~~l 346 (423)
T 4gic_A 307 SLER------------------------------------RG---GMILVDDLEQAAAVANRIAPE-HLELSVESPEVLV 346 (423)
T ss_dssp HHHH------------------------------------HC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHHHHG
T ss_pred HHhc------------------------------------Cc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHHHHH
Confidence 2111 01 345679999999999986332 4677888876643
Q ss_pred HhhcccCcceeEEEEcCCCC--CCCCC-CCccCCCCCCCCCcchHHHHHHhhheeEEEEeCC
Q 010506 438 KWLGPHGSDTGIVNVNIPTN--GAEIG-GAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 438 ~~~~~~~~~~g~V~iN~~~~--~~~~~-~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
.-. -.+|.|++...++ ..+.. -|--=-..+|+.|+.+.-+...|+++.++ +.++
T Consensus 347 ~~i----~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~~F~K~~s~-~~~s 403 (423)
T 4gic_A 347 ESI----RNAGAIFMGRYTAEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSL-IYCS 403 (423)
T ss_dssp GGC----CCCSEEEEC----------------CCCCTTGGGTCCCCCGGGGEEEEEE-EC--
T ss_pred hhC----cEeceeecCCCCchhhhhcCcCCCccCCCCCcccccCCCCHHHeeeeeeE-EEEC
Confidence 322 4689999976442 11110 01001134566666666778889887654 4443
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.27 Score=49.14 Aligned_cols=259 Identities=16% Similarity=0.165 Sum_probs=148.4
Q ss_pred CceeEEEEeecceEEEEeCC---CCchhhhHHHHHHHhhcCCE--EEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEE
Q 010506 145 NHMMLETWNPLGVVGVITAF---NFPCAVLGWNACIALVCGNC--VVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFT 219 (508)
Q Consensus 145 ~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~--VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~ 219 (508)
+.....++.|+.-|++..|. -||- +++....||-.+|.. |+.-|..-.|.+- -+...+|+-+ ++.
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~i~p~iL--------~AA~l~Gv~e-Iy~ 183 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADEIL--------YAAQLCGVQD-VFN 183 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSSCCHHHH--------HHHHHTTCCE-EEE
T ss_pred CcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCCCCHHHH--------HHHHHcCCCE-Eee
Confidence 44556678999999999996 4774 444578899999884 3445542333321 1245566643 222
Q ss_pred EecCChhhHHHHH----cCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccC-ccCe--EEEcCCCCHHHHHHHHHHHH
Q 010506 220 SFCGGAEIGQAIA----KDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS-GNNA--IIIMDDADIKLAVRSVLFAA 292 (508)
Q Consensus 220 ~v~g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elg-G~~~--~iV~~daDl~~aa~~i~~~~ 292 (508)
-||.+.-.+|. .-|.||.|+=.|..=+...=.. .....+.+-..+- |.+= +|-+++||.+..+..++.-+
T Consensus 184 --vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~-Vs~~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQA 260 (434)
T 1kae_A 184 --VGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQ-VSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQA 260 (434)
T ss_dssp --CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHH-HHHCTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHH
T ss_pred --cccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHH-hHhhcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 25666656565 3588999988887654332111 1111223332222 3333 34455689999888887654
Q ss_pred HhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc
Q 010506 293 VGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI 372 (508)
Q Consensus 293 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~ 372 (508)
=... . .+.++|..+ ++|.+++.+.+.+..-.-| . .+. ++.+.
T Consensus 261 EHd~----~-a~aiLvT~s--~~la~~V~~ev~~ql~~lp-----------r---~~i----a~~sl------------- 302 (434)
T 1kae_A 261 EHGP----D-SQVILLTPA--ADMARRVAEAVERQLAELP-----------R---AET----ARQAL------------- 302 (434)
T ss_dssp TTCT----T-CEEEEEESC--HHHHHHHHHHHHHHHTTCT-----------T---HHH----HHHHH-------------
T ss_pred ccCC----C-CcEEEEECC--HHHHHHHHHHHHHHHHhCC-----------h---HHH----HHHHH-------------
Confidence 3332 2 345566555 3455555444443210000 1 111 11121
Q ss_pred CCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEE
Q 010506 373 ESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNV 452 (508)
Q Consensus 373 ~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~i 452 (508)
..- .|+.++|++||++++|..-.= -.-|.++|......-. -.+|.|++
T Consensus 303 --------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~~~l~~I----~nAGaIFl 350 (434)
T 1kae_A 303 --------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNARELVDSI----TSAGSVFL 350 (434)
T ss_dssp --------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHHHHGGGC----CSCSEEEE
T ss_pred --------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHHHHHhhc----Ccccchhc
Confidence 112 566789999999999986432 4678889986654332 47899999
Q ss_pred cCCCC--------CCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 453 NIPTN--------GAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 453 N~~~~--------~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
...++ +.+.-+|- +|+.|+.+.-+...|+++.++
T Consensus 351 G~~tpe~~GDY~aG~NHvLPT-----~G~AR~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 351 GDWSPESAGDYASGTNHVLPT-----YGYTATCSSLGLADFQKRMTV 392 (434)
T ss_dssp STTCCHHHHHHTSSSCCCCCC-----TTGGGTCCCSCGGGGEEEEEE
T ss_pred CCCCchhhcccccCCCcccCC-----CCceeccCCCcHHhccceeeE
Confidence 87553 22223444 455566666678888887654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 508 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-118 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-116 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-112 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 4e-97 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-87 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 5e-82 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 4e-79 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-68 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-44 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-41 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 7e-25 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 353 bits (908), Expect = e-118
Identities = 142/484 (29%), Positives = 223/484 (46%), Gaps = 17/484 (3%)
Query: 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W + G NP +K+ V E ED ++ +KA +A +I W + A
Sbjct: 17 FINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDAS 76
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGKIL-PEGIGEVQEVIDMCDFAVGLSRQLNGS 137
+RG ++ ++ D + L + ++ GK+ + ++ I + G + ++ G
Sbjct: 77 ERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGR 136
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197
IP + N P+GV G I +NFP + W AL CGN VV K A TPL
Sbjct: 137 TIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTA 195
Query: 198 IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
+ + L+ E P + G G G AI+ + V+FTGST+VG ++++
Sbjct: 196 LHMGSLIKEA----GFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAA 251
Query: 257 HQRFGK-CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
+ K LEL G + I+ DAD+ AV GQ C RL + ESIY
Sbjct: 252 GKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDE 311
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375
+ + V+ K+ +G+PL G GP E + IE+ K +G K+ GG ++
Sbjct: 312 FVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNK 371
Query: 376 GNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
G F+QPT+ ++ I KEE+F PV +MKF++ ++ +K N+ GLS+ IFT +
Sbjct: 372 GYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDID 431
Query: 435 NIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494
+G V VN + FGG K +G GRE G + +Y T TI
Sbjct: 432 KAITVS--SALQSGTVWVNC-YSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 488
Query: 495 YGNE 498
+
Sbjct: 489 ISQK 492
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 349 bits (896), Expect = e-116
Identities = 139/485 (28%), Positives = 214/485 (44%), Gaps = 17/485 (3%)
Query: 23 CFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPA 77
F+N +W T ++NP + I V E ED ++ +KA A ++ W + A
Sbjct: 16 IFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDA 75
Query: 78 PKRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNG 136
RG ++ ++ D + +L L +++ GK + + ++ V+ + G + + +G
Sbjct: 76 SHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHG 135
Query: 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
IP + + P+GV G I +NFP + W AL GN VV K A TPL
Sbjct: 136 KTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 194
Query: 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255
+ + L + P + G G G AIA + V+FTGST++G ++Q
Sbjct: 195 ALYVANL----IKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVA 250
Query: 256 VHQRFGK-CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
K LEL G + IIM DAD+ AV FA GQ R + E IY
Sbjct: 251 AGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYD 310
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
+++ V K +G+P + T GP K I K +G K+L GG +
Sbjct: 311 EFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAAD 370
Query: 375 EGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
G F+QPT+ + I KEE+F PV+ ++KF+T EE V N+ GL++++FT+
Sbjct: 371 RGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 430
Query: 434 ENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493
+ G V VN FGG K +G GRE G + Y T T+
Sbjct: 431 DKANYLS--QALQAGTVWVNCYDVFGA-QSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 487
Query: 494 NYGNE 498
+
Sbjct: 488 KVPQK 492
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 340 bits (873), Expect = e-112
Identities = 124/484 (25%), Positives = 210/484 (43%), Gaps = 18/484 (3%)
Query: 24 FVNGKW---KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
+ G+ K T P + + +V E+ ++ +++ A W ++ +R
Sbjct: 23 YWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIER 82
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
V+ + +RE+ ++ +L I GK + E ++ ++ GL+
Sbjct: 83 SRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPT-LSGQHI 141
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
PLGV I A+N+P + W AL CGN VV+K +P TP+ + +
Sbjct: 142 QLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVIL 201
Query: 201 TKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
++ E +P + GGAE G + P ++ VSFTGS G V + +
Sbjct: 202 AEIFHEAG----VPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV 257
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
LEL G + ++I D +++ AVR L A T GQ CT R+ + I L+++
Sbjct: 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEV 317
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE------S 374
V K + +GDPL T +G L + + K +G ++L GG +
Sbjct: 318 VKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLK 377
Query: 375 EGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
G F+ P +++ VKEE+F PV+ V+ F T EE ++ N+ GL+S +FTR
Sbjct: 378 NGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDI 437
Query: 434 ENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493
+ + G +N + + FGG K +G GRE G + Y + T +
Sbjct: 438 SRAHRVA--ANLEAGTCYINTYSISP-VEVPFGGYKMSGFGRENGQATVDYYSQLKTVIV 494
Query: 494 NYGN 497
G+
Sbjct: 495 EMGD 498
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 299 bits (767), Expect = 4e-97
Identities = 121/477 (25%), Positives = 198/477 (41%), Gaps = 11/477 (2%)
Query: 23 CFVNGKW-KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+NG+ G NP + + EAS E + ++A A W + R
Sbjct: 5 LLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRA 64
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP- 140
E + ++ D + E L S GK L + I + + +
Sbjct: 65 ECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAG 124
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
H + +PLGVV I +N+P + W AL GNCVV K + TPL + +
Sbjct: 125 EYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKL 184
Query: 201 TKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
+L ++F G + F G +G + P++ +VS TGS G +
Sbjct: 185 AELAKDIFP----AGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSI 240
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
+ +EL G +I+ DDADI+ V V AGQ CT R+ + IY T++++L
Sbjct: 241 KRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKL 300
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESEGNFV 379
+K G P ++ T LGPL + + K +E K+ G K++TGG + G +
Sbjct: 301 GAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYY 360
Query: 380 QPTIVEISPTAD-IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
PT++ + D IV++E+F PV+ V F E+ V N GL+SS++T+ +
Sbjct: 361 APTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHR 420
Query: 439 WLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495
VN + GG+K +G G++ + Y + +
Sbjct: 421 VSARLQYGCTWVNTHFMLVSE---MPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH 474
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 275 bits (703), Expect = 1e-87
Identities = 115/478 (24%), Positives = 218/478 (45%), Gaps = 19/478 (3%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
+VNG+WK + P + ++ +V S E+ + + +A W L +R
Sbjct: 7 YVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAY 66
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSV----- 138
+ ++ D L +G +LS E+ K + EV ++ ++A ++ G V
Sbjct: 67 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 126
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ + + P+G+V I+ FN+P + G AL+ GN + +K + +
Sbjct: 127 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL 186
Query: 199 AITKLVSEVFERNKLP-GAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
+ + +E LP G T G+EIG I + ++ ++FTGST +G + +
Sbjct: 187 LLAEAFAEAG----LPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG 242
Query: 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
R +LEL G ++ I+++DAD++L ++++ A G +GQRCT +R+L+ ES+ ++
Sbjct: 243 MRP--IMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 300
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN 377
+++ + + IG+P + + K+ + I K T + I+ EGN
Sbjct: 301 EKIREKVLALTIGNPEDDAD----ITPLIDTKSADYVEGLINDANDKGATALTEIKREGN 356
Query: 378 FVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENI 436
+ P + + ++ + EE F PVL +++ + EEA++I+N GL +SIFT
Sbjct: 357 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 416
Query: 437 FKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494
F + G V++N T F G K +G G + S + + +
Sbjct: 417 FGIA--EQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 472
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 262 bits (669), Expect = 5e-82
Identities = 131/484 (27%), Positives = 231/484 (47%), Gaps = 20/484 (4%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQK-IATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
++ G+W + S+NP + + T +A + E ++A +A K W + P R
Sbjct: 41 YIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSR 100
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQ-LNGSVIPS 141
++ + +R + L L E+GK E +V E ID ++ + + +V
Sbjct: 101 LLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVV 160
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
P + PLG VI +NFP A+ + GN V+ K A ++ +
Sbjct: 161 PYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVF 220
Query: 202 KLVSEVFERNKLP-GAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ-- 258
E+F P G + G E+G + + PRI ++FTGS +VGL + + +
Sbjct: 221 ----EIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLA 276
Query: 259 ----RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
F + +E G NAII+ + AD LA V+ +A G GQ+C+ RL++ + Y+
Sbjct: 277 PGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYE 336
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
VL++++ +++ +G P E+ LGP+ + E + IE K++G +++ GG +E
Sbjct: 337 PVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEG 394
Query: 375 EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
EG F+ PT+ E+ P A I +EE+F PVL V++ + F EA+++ N P GL+ +++R
Sbjct: 395 EGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKR 454
Query: 434 ENIFKWLGPHGSDTGIVNVNIPTNGAEIGGA-FGGEKATGGGREAGS-DSWKQYMRRSTC 491
E++ G + N GA +G FGG K +G + G+ D + ++
Sbjct: 455 EHLEWAR--REFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512
Query: 492 TINY 495
+
Sbjct: 513 AERF 516
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 254 bits (648), Expect = 4e-79
Identities = 111/482 (23%), Positives = 202/482 (41%), Gaps = 15/482 (3%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-IWMELPAPKRGE 82
++ G+W G + +P++ IA V+ S E+ E + + + ++P +R
Sbjct: 20 YLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLA 79
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF----AVGLSRQLNGSV 138
V+R+ D + L +L + GK +GEV+ +D +
Sbjct: 80 VLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGD 139
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ L PLGVV IT FN+P + + GN VV K + + PL
Sbjct: 140 WTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAA 199
Query: 199 AITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
K + + + + I D R++ VSFTGST+VG V +
Sbjct: 200 MAVKALLDAGFPPD----AIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGGV 255
Query: 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318
+ ++EL G + I+++DAD+ LA + AGQRC + +L +Y +++
Sbjct: 256 KQ--YVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVE 313
Query: 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE--G 376
++ +++GDP + +GPL +P + IE+ +GG++L GG +
Sbjct: 314 EVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQ 373
Query: 377 NFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENI 436
+ + + K E+FAPV ++ + ++A+++ N P GL +++F R I
Sbjct: 374 PTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKI 433
Query: 437 FKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496
+ + + G + +N FGG K +G RE + + T NY
Sbjct: 434 RRAV--RLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYK 491
Query: 497 NE 498
+
Sbjct: 492 GK 493
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 224 bits (570), Expect = 3e-68
Identities = 87/442 (19%), Positives = 173/442 (39%), Gaps = 21/442 (4%)
Query: 59 EEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEV 117
+ +K EA R + + + + E L + L+ ++GK EV
Sbjct: 3 SDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEV 62
Query: 118 QEVIDMCDFAVGLSRQLNGSVI---PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174
V++ D + + + PLGVV VI A+N+P +
Sbjct: 63 AHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQP 122
Query: 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKD 234
A+ GN V+ K + + + + L+ + ++N
Sbjct: 123 MVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTE------LLK 176
Query: 235 PRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVG 294
R + +TGST VG +V + LEL G + + D D+ +A R + +
Sbjct: 177 ERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM 236
Query: 295 TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG 354
+GQ C +L SI ++++ + + G+ ++ G + + +
Sbjct: 237 NSGQTCVAPDYILCDPSIQNQIVEK-LKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGL 295
Query: 355 IENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413
I+N K G ++ PTI+ ++ P + +++EE+F PV+ ++ ++ EEA
Sbjct: 296 IDNQKVAHGGTWDQS------SRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEA 349
Query: 414 VKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGA-FGGEKATG 472
++ N + L+ +F+ + + I K + + +G V N + FGG +G
Sbjct: 350 IQFINQREKPLALYVFSNNEKVIKKMI--AETSSGGVTANDVIVHITVPTLPFGGVGNSG 407
Query: 473 GGREAGSDSWKQYMRRSTCTIN 494
G G S++ + R +C +
Sbjct: 408 MGAYHGKKSFETFSHRRSCLVK 429
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 161 bits (407), Expect = 2e-44
Identities = 79/480 (16%), Positives = 156/480 (32%), Gaps = 33/480 (6%)
Query: 35 TVSSINPVNNQKIATVV-EASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALRE 93
+ N + + + + + A ++ ++ + L KR ++R I L
Sbjct: 4 VFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEA 63
Query: 94 KLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP--------SERPN 145
+ + +E GE+ + + + + P
Sbjct: 64 RSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPK 123
Query: 146 HMMLETWNPLGVVGVITAFNFPCAVLGWNACIA--LVCGNCVVWKGAPTTPLITIAITKL 203
+ LG V V A NFP A A L G V+ KG P + + +
Sbjct: 124 PDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAEC 183
Query: 204 VSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK 262
+ + ++ +LP AIFT G +GQA+ P I V FTGS G + H+R
Sbjct: 184 IEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEP 243
Query: 263 CLL--ELSGNNAIIIMDDADIKLAVRSV--LFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318
EL N I A A + + + GQ CT + +
Sbjct: 244 IPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFI 303
Query: 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNF 378
+ + + L + + + + GI+ SQ + +
Sbjct: 304 ETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQ--------AESPCVASA 355
Query: 379 VQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE--NI 436
+ T E +EE+F P ++ + + + ++ + L+++I + +
Sbjct: 356 LFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQV 415
Query: 437 FKWLGPHGSDTGIVNVNIPTNGAEI------GGAFGGEKATGGGREAGSDSWKQYMRRST 490
+ + G + N G E+ GG + G+++ +++R
Sbjct: 416 SQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTH-SASTSVGAEAIHRWLRPVA 474
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 151 bits (381), Expect = 2e-41
Identities = 71/444 (15%), Positives = 141/444 (31%), Gaps = 65/444 (14%)
Query: 56 EDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115
++ E K EA + ++ + +++I + L E+ + I++ K G+
Sbjct: 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK 60
Query: 116 E------------VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITA 163
E + E+I C+ +GL + + R + + + + +
Sbjct: 61 ESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRV-PIGPIGII 119
Query: 164 FNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG 223
+ V +AL GN ++ +G AI + E + ++P +
Sbjct: 120 YESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIP--ESSVEFI 177
Query: 224 GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKL 283
+ + R+ + G + V +LE N I +D++
Sbjct: 178 ENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLK 237
Query: 284 AVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLH 343
V+ A C +LL+HE I + L +V+ ++ + + T
Sbjct: 238 KAVPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPD 297
Query: 344 TPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLY 403
+ T D E ++
Sbjct: 298 V-----------------------------------------VPATEDDWPTEYLDLIIA 316
Query: 404 VMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGG 463
+ + +EA++ G S SI T + N K++ D V VN T + GG
Sbjct: 317 IKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFV--SEIDAAAVYVNASTRFTD-GG 373
Query: 464 AFGGEKATGGGREAGSDSWKQYMR 487
F G G E G + + + R
Sbjct: 374 QF------GFGAEIGISTQRFHAR 391
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 104 bits (260), Expect = 7e-25
Identities = 70/430 (16%), Positives = 140/430 (32%), Gaps = 55/430 (12%)
Query: 59 EEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGE-- 116
++ K +A I + R +++ +I DAL+ H + I++ G+ +
Sbjct: 6 QQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSL 65
Query: 117 -----------VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFN 165
+ ++ L + + E + + L V ++ F
Sbjct: 66 LKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGV-LLVIFE 124
Query: 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL----PGAIFTSF 221
V+ +++ GN + KG + + K+V++ + + P
Sbjct: 125 SRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLI 184
Query: 222 CGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADI 281
++ + +D I LV GS +V++ L G +I + +DAD+
Sbjct: 185 ETRQDVSDLLDQDEYIDLVVPRGS---NALVRKIKDTTKIPVLGHADGICSIYLDEDADL 241
Query: 282 KLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGP 341
A R L A L I+ + +V LE G +
Sbjct: 242 IKAKRISLDAKTNYPAGCNAMETLL-INPKFSKWW---------EVLENLTLEGGVTIHA 291
Query: 342 LHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPV 401
T + + + + + I + E +F +E +
Sbjct: 292 --TKDLKTAYFDKLNELGKLTEAIQCKTVDADEEQDF---------------DKEFLSLD 334
Query: 402 LYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPT---NG 458
L + E A++ N+ + +I T + N K++ G D+ V N T +G
Sbjct: 335 LAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFM--KGVDSSGVYWNASTRFADG 392
Query: 459 AEIGGAFGGE 468
G FG E
Sbjct: 393 FRYG--FGAE 400
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 508 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 97.68 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=3.9e-102 Score=821.16 Aligned_cols=471 Identities=29% Similarity=0.514 Sum_probs=442.6
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH---HhccCChhHHHHHHHHHHHHHHHh
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK---IWMELPAPKRGEVVRQIGDALREK 94 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
+.++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+ .|++++.++|.++|+++++.|+++
T Consensus 13 ~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~L~~~ 92 (494)
T d1bxsa_ 13 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 92 (494)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHhC
Confidence 447999999983 678999999999999999999999999999999999985 699999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHH
Q 010506 95 LHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 173 (508)
+++|+++++.|+|||..++. .++...++.+++++...+...+...+.. .+...+..++|+|||++|+|||||+.++++
T Consensus 93 ~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 171 (494)
T d1bxsa_ 93 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLW 171 (494)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCS-SSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCC-CCceeEEEEccEEEEEEEeCccchhHHHHH
Confidence 99999999999999999865 6899999999999998887766554432 345677889999999999999999999999
Q ss_pred HHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHH
Q 010506 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (508)
Q Consensus 174 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (508)
++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|++||+|++|+||||+.+|+.|
T Consensus 172 ~i~~ALaaGN~VVlKpse~tp~~a~~l----~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i 247 (494)
T d1bxsa_ 172 KIGPALSCGNTVVVKPAEQTPLTALHM----GSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLI 247 (494)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHH----HHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCCCChHHHHHH----HHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHH
Confidence 999999999999999999999999876 4556788999999999999 67889999999999999999999999999
Q ss_pred HHHhhh-ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCC
Q 010506 253 QQTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (508)
Q Consensus 253 ~~~a~~-~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 331 (508)
++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 248 ~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~ 327 (494)
T d1bxsa_ 248 KEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGN 327 (494)
T ss_dssp HHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSC
T ss_pred HHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeec
Confidence 998885 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCH
Q 010506 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
|.++++++||+++.++++++.+++++++++|+++++||...+..|+|++|||+ ++++++.+++||+||||++|++|+|+
T Consensus 328 ~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~ 407 (494)
T d1bxsa_ 328 PLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 407 (494)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCH
Confidence 99999999999999999999999999999999999999887778999999987 68999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeE
Q 010506 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~ 490 (508)
+|||+++|+++|||++||||+|.+.+++++ .++++|+|+||+++. ..+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 408 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~ 484 (494)
T d1bxsa_ 408 DDVIKRANNTFYGLSAGIFTNDIDKAITVS--SALQSGTVWVNCYSV-VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKT 484 (494)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCCSEEEESCCCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEE
T ss_pred HHHHHHHhCCCCCCeEEEEeCCHHHHHHHH--HhCCEeEEEEcCCCC-cCCCCCcCccccccCChhhHHHHHHHhcceEE
Confidence 999999999999999999999999999999 789999999998654 45679999999999999999999999999999
Q ss_pred EEEeCCCC
Q 010506 491 CTINYGNE 498 (508)
Q Consensus 491 v~~~~~~~ 498 (508)
|+++++.+
T Consensus 485 i~~~~~~~ 492 (494)
T d1bxsa_ 485 VTIKISQK 492 (494)
T ss_dssp EEEECSCC
T ss_pred EEEecCCC
Confidence 99999764
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=6.3e-101 Score=811.41 Aligned_cols=471 Identities=29% Similarity=0.485 Sum_probs=441.4
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH---HhccCChhHHHHHHHHHHHHHHHh
Q 010506 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK---IWMELPAPKRGEVVRQIGDALREK 94 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
..++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+ .|++++.++|.++|+++++.|+++
T Consensus 13 ~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~~~ 92 (494)
T d1o04a_ 13 CNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERD 92 (494)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHHh
Confidence 337899999993 678999999999999999999999999999999999985 699999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHH
Q 010506 95 LHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 173 (508)
+++|++++++|+|||..++. .|+...++.+++++...+...++..+.. .+...+..++|+|||++|+|||||+..+++
T Consensus 93 ~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~ 171 (494)
T d1o04a_ 93 RTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAW 171 (494)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCS-SSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccC-CCceeEEEEecccEEEEECCcccHHHHHHH
Confidence 99999999999999999985 6999999999999998877766554432 345677889999999999999999999999
Q ss_pred HHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHH
Q 010506 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (508)
Q Consensus 174 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (508)
++++||++||+||+|||+.+|.++.++ .+++.++|+|+|++|+|+| +.+.++.|+.||+|+.|.||||+.+|+.|
T Consensus 172 ~~~~ALaaGN~VVlKps~~~p~~~~~l----~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i 247 (494)
T d1o04a_ 172 KLGPALATGNVVVMKVAEQTPLTALYV----ANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVI 247 (494)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCcHHHHHH----HHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHH
Confidence 999999999999999999999999876 4557788999999999999 67899999999999999999999999999
Q ss_pred HHHhh-hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCC
Q 010506 253 QQTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (508)
Q Consensus 253 ~~~a~-~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 331 (508)
++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|++.|.++++.+++|+
T Consensus 248 ~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~ 327 (494)
T d1o04a_ 248 QVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 327 (494)
T ss_dssp HHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCC
T ss_pred HHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecC
Confidence 98875 67899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCH
Q 010506 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
|.++++++||+++..+++++.+++++++++|+++++||....+.|+|++|||+ ++++++++++||+||||++|++|+|+
T Consensus 328 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~ 407 (494)
T d1o04a_ 328 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 407 (494)
T ss_dssp TTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCH
Confidence 99999999999999999999999999999999999999886778999999987 68899999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeE
Q 010506 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~ 490 (508)
+|||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 408 ~eai~~an~~~~gL~a~i~s~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~ 484 (494)
T d1o04a_ 408 EEVVGRANNSTYGLAAAVFTKDLDKANYLS--QALQAGTVWVNCYDV-FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKT 484 (494)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHCCSSEEEESCSSC-CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEE
T ss_pred HHHHHHHhCCCCCCeEEEEeCCHHHHHHHH--HhCCeeEEEEcCCCC-CCCCCCcCCcccccCCchhHHHHHHHhcCeEE
Confidence 999999999999999999999999999999 789999999998654 34678999999999999999999999999999
Q ss_pred EEEeCCCC
Q 010506 491 CTINYGNE 498 (508)
Q Consensus 491 v~~~~~~~ 498 (508)
|++++|.+
T Consensus 485 v~~~~p~k 492 (494)
T d1o04a_ 485 VTVKVPQK 492 (494)
T ss_dssp EEEECSCC
T ss_pred EEEeCCCC
Confidence 99998854
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=5.8e-100 Score=804.63 Aligned_cols=469 Identities=27% Similarity=0.484 Sum_probs=439.6
Q ss_pred CCCceecCEEec--CCCe-EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHH
Q 010506 20 TPGCFVNGKWKA--HGPT-VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~-~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
...+||||+|+. ++.+ .+++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|+++++.|+++++
T Consensus 19 ~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~e 98 (503)
T d1a4sa_ 19 DDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRD 98 (503)
T ss_dssp SCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 445799999994 3444 4799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHH
Q 010506 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 176 (508)
+|+++++.|+|||+.+++.|+...++.+++++...+...+..... ..+...+..++|+|||++|+|||||+...+++++
T Consensus 99 ela~~~~~etGkp~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~ 177 (503)
T d1a4sa_ 99 NIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQL-PGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCA 177 (503)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEEC-GGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhhhhcchhhhhhhhhhhhccccccccccccccccccc-CCCcccccccccceeeecccCCCChHHHHHHHHH
Confidence 999999999999999999999999999999998877665543332 2344678899999999999999999999999999
Q ss_pred HHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHh
Q 010506 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (508)
Q Consensus 177 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (508)
+||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+|+.+.++.|++||+|++|+||||+++|+.|++.+
T Consensus 178 ~ALaaGN~VV~Kps~~~p~~~~~l~----~~~~~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~a 253 (503)
T d1a4sa_ 178 PALACGNAVVFKPSPMTPVTGVILA----EIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253 (503)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHH----HHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCCChHHHHHHH----HHHHHhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHh
Confidence 9999999999999999999998764 556789999999999999889999999999999999999999999999999
Q ss_pred hhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCC
Q 010506 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (508)
Q Consensus 257 ~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 336 (508)
+++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|+++|.+.++++++|+|.++.
T Consensus 254 a~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~ 333 (503)
T d1a4sa_ 254 AKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTE 333 (503)
T ss_dssp HTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred hhcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC------CCCceeccEEE-ecCCCCcccccccccceeEeEEeCC
Q 010506 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE------SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (508)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~------~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~ 409 (508)
+++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+ +++++++++++|+||||++|++|+|
T Consensus 334 ~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~ 413 (503)
T d1a4sa_ 334 TRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDT 413 (503)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred cccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCC
Confidence 9999999999999999999999999999999997532 47899999988 6899999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhee
Q 010506 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489 (508)
Q Consensus 410 ~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k 489 (508)
+||||+++|+++|||++||||+|.+.+++++ .++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++||+.|
T Consensus 414 ~~eai~~an~~~~gL~~~i~t~d~~~~~~~~--~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k 490 (503)
T d1a4sa_ 414 EEEVLQRANNTTFGLASGVFTRDISRAHRVA--ANLEAGTCYINTYSIS-PVEVPFGGYKMSGFGRENGQATVDYYSQLK 490 (503)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCSSEEEESCCCCC-CTTSCBCCSGGGEECCBSTTGGGGGSEEEE
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH--HhCCeeEEEEeCCCCC-CCCCCccCcccCcCCcchHHHHHHHhhCeE
Confidence 9999999999999999999999999999999 7899999999997654 467999999999999999999999999999
Q ss_pred EEEEeCC
Q 010506 490 TCTINYG 496 (508)
Q Consensus 490 ~v~~~~~ 496 (508)
+|+++++
T Consensus 491 ~v~~~~~ 497 (503)
T d1a4sa_ 491 TVIVEMG 497 (503)
T ss_dssp EEEECCS
T ss_pred EEEEcCC
Confidence 9999984
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.1e-99 Score=798.88 Aligned_cols=468 Identities=27% Similarity=0.445 Sum_probs=430.7
Q ss_pred CCCceecCEEe-cCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHH
Q 010506 20 TPGCFVNGKWK-AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (508)
Q Consensus 20 ~~~~~i~g~~~-~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (508)
+.++||||+|+ .++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++++|
T Consensus 2 ~~~l~I~G~~v~~~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el 81 (474)
T d1wnda_ 2 QHKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVF 81 (474)
T ss_dssp CCCEEETTEEECCCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCccEECCeEeCCCCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHH
Confidence 46789999998 45689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhh-hHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHH
Q 010506 99 GRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (508)
Q Consensus 99 a~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 177 (508)
+++++.|+|||+.++.. ++......+++++...+.......+...++...+.+++|+|||++|+|||||+.+.++++++
T Consensus 82 a~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a~ 161 (474)
T d1wnda_ 82 AELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 161 (474)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhccHHH
Confidence 99999999999999975 55566666666665554433322222334567788999999999999999999999999999
Q ss_pred HhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHh
Q 010506 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (508)
Q Consensus 178 ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (508)
||++||+||+|||+.+|+++..++++ +++ ++|+|++|+|+| +.+.++.|++||+|++|.||||+++|+.|++.+
T Consensus 162 ALaaGN~Vv~Kps~~~p~~~~~~~~l----~~~-~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a 236 (474)
T d1wnda_ 162 ALAAGNCVVLKPSEITPLTALKLAEL----AKD-IFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT 236 (474)
T ss_dssp HHHTTCEEEEECCTTCCHHHHHHHHH----HTT-TSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHhCCCEEEeCCCcCcHHHHHHHHH----HHH-hCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhh
Confidence 99999999999999999999877554 444 599999999999 678999999999999999999999999999999
Q ss_pred hhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCC
Q 010506 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (508)
Q Consensus 257 ~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 336 (508)
+++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++.++++++|+|.+++
T Consensus 237 ~~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~ 316 (474)
T d1wnda_ 237 ASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 316 (474)
T ss_dssp GGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred hcCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCe-EeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHH
Q 010506 337 TLLGPLHTPESRKNFEKGIENIKSQGGK-ILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAV 414 (508)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~ga~-v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 414 (508)
+.+||+++..+.+++.+++++++++|+. ++.|+...+..|+|++|||+ ++++++.+++||+||||++|++|+|+||||
T Consensus 317 ~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai 396 (474)
T d1wnda_ 317 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVV 396 (474)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred ceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHH
Confidence 9999999999999999999999999985 55666665678999999987 688999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEe
Q 010506 415 KINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 415 ~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 494 (508)
+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 397 ~~an~~~~GL~a~i~t~d~~~~~~~~--~~l~~g~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~ 473 (474)
T d1wnda_ 397 NWANDSQYGLASSVWTKDVGRAHRVS--ARLQYGCTWVNTHFM-LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 473 (474)
T ss_dssp HHHHSSSCCSEEEEECSBHHHHHHHH--HHCCSSEEEESCCCC-CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhCCCCCCeEEEEeCCHHHHHHHH--HhCCccEEEEeCCCC-ccCCCCcccccccccCccCHHHHHHHcCCEEEEEEe
Confidence 99999999999999999999999999 889999999999754 456799999999999999999999999999999998
Q ss_pred C
Q 010506 495 Y 495 (508)
Q Consensus 495 ~ 495 (508)
|
T Consensus 474 ~ 474 (474)
T d1wnda_ 474 H 474 (474)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.1e-97 Score=790.60 Aligned_cols=479 Identities=27% Similarity=0.478 Sum_probs=437.9
Q ss_pred hhhhhcCCC-CCCCCceecCEEecCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHH
Q 010506 9 EFLSEIGLS-PETPGCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQ 86 (508)
Q Consensus 9 ~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~v~~P~-~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~ 86 (508)
+.|+.+... ++++++||||+|+.+++++.++||. ||+++++++.++.+|+++|+++|++|++.|+++|.++|.++|++
T Consensus 25 ~~~~~~~~~~~~~~~l~I~G~~v~s~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~ 104 (516)
T d1uzba_ 25 EALRRVREEFGRHYPLYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLK 104 (516)
T ss_dssp HHHHHHHHTTTEEECEEETTEEECCSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCeEEcCEEECCCCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 344443332 4688999999999888899999996 79999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCccc-CCCCCceeEEEEeecceEEEEeCCC
Q 010506 87 IGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP-SERPNHMMLETWNPLGVVGVITAFN 165 (508)
Q Consensus 87 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n 165 (508)
+++.|++++++|+++++.|+|||..+++.|+...++.+++++...+........ ...++...+..++|+|||++|+|||
T Consensus 105 ~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN 184 (516)
T d1uzba_ 105 AAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWN 184 (516)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccchhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCccccccccc
Confidence 999999999999999999999999999999999999999999887766543222 2233456677899999999999999
Q ss_pred CchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeC
Q 010506 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244 (508)
Q Consensus 166 ~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftG 244 (508)
||+.++++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|++||+|++|.|||
T Consensus 185 ~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l----~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTG 260 (516)
T d1uzba_ 185 FPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKV----FEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTG 260 (516)
T ss_dssp STTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH----HHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEES
T ss_pred cccccccccccchhhhcccccccccchhHHHHHHH----HHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEeccc
Confidence 99999999999999999999999999999999876 5667889999999999999 788999999999999999999
Q ss_pred CHHHHHHHHHHhh------hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHH
Q 010506 245 STKVGLMVQQTVH------QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318 (508)
Q Consensus 245 s~~~g~~i~~~a~------~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~ 318 (508)
|+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|++
T Consensus 261 s~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~ 340 (516)
T d1uzba_ 261 SLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLE 340 (516)
T ss_dssp CHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHH
T ss_pred chhHHHHHHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhh
Confidence 9999999999887 5789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCccccccc
Q 010506 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEEL 397 (508)
Q Consensus 319 ~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~ 397 (508)
++.++++++++| |.++.+++||+++..+++++.+++++++++|+.+ +||...+..|+|++|||+ ++++++++++||+
T Consensus 341 ~~~~~~~~l~~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~ 418 (516)
T d1uzba_ 341 RVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEI 418 (516)
T ss_dssp HHHHHHTTCCBS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCC
T ss_pred HHHHHHHhcccC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCC
Confidence 999999999999 5678899999999999999999999998888655 566666778999999988 6999999999999
Q ss_pred ccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCC-CCCCCccCCCCCCCCCc
Q 010506 398 FAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGA-EIGGAFGGEKATGGGRE 476 (508)
Q Consensus 398 fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfGG~~~SG~g~~ 476 (508)
||||++|++|+|++|||+++|+++|||++||||+|.+.+++++ .++++|+|+||+++... .+.+||||+|.||+|++
T Consensus 419 FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~ 496 (516)
T d1uzba_ 419 FGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWAR--REFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAK 496 (516)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHH--HHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCC
T ss_pred cCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHH--HhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcc
Confidence 9999999999999999999999999999999999999999999 78999999999975443 45689999999999998
Q ss_pred ch-HHHHHHhhheeEEEEeC
Q 010506 477 AG-SDSWKQYMRRSTCTINY 495 (508)
Q Consensus 477 ~g-~~~~~~~~~~k~v~~~~ 495 (508)
+| .+++++||+.|+|+.+|
T Consensus 497 ~G~~~~l~~~~~~k~v~~r~ 516 (516)
T d1uzba_ 497 TGALDYLRLFLEMKAVAERF 516 (516)
T ss_dssp BTSHHHHHTTEEEEEEEEEC
T ss_pred cchHHHHHHhCCeeeEEEcC
Confidence 75 79999999999998765
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=1.5e-92 Score=749.16 Aligned_cols=470 Identities=26% Similarity=0.415 Sum_probs=433.2
Q ss_pred CCCceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH-HhccCChhHHHHHHHHHHHHHHHhHHHH
Q 010506 20 TPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-IWMELPAPKRGEVVRQIGDALREKLHHL 98 (508)
Q Consensus 20 ~~~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (508)
.+++||||+|+.++++++++||.||+++++++.++.+|+++|+++|+++++ .|+++|.++|.++|+++++.|++++++|
T Consensus 16 ~~~~~I~G~~~~sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 95 (499)
T d1ky8a_ 16 VYPSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVF 95 (499)
T ss_dssp EECEECSSSEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCCCEECCeECCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 588999999998889999999999999999999999999999999988877 7999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCccc----CCCCCceeEEEEeecceEEEEeCCCCchhhhHHH
Q 010506 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP----SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (508)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 174 (508)
+++++.|+|||..+++.|+...++.+++++...+...+.... ........+.+++|+|||++|+|||||+.+++++
T Consensus 96 a~~~~~etGk~~~~a~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~~~~~ 175 (499)
T d1ky8a_ 96 AEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNK 175 (499)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHhhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccchhhhhc
Confidence 999999999999999999999999999999888766543321 1223446678899999999999999999999999
Q ss_pred HHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH
Q 010506 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (508)
Q Consensus 175 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (508)
+++||++||+||+|||+.+|+++..+ .+++.++|+|.++++++.+..+.+..|+.|++++.+.||||+.+++.+++
T Consensus 176 ~~~ALaaGn~Vi~Kps~~~~~~~~~l----~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~i~~ 251 (499)
T d1ky8a_ 176 ITYSFIYGNAVVVKPSISDPLPAAMA----VKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVK 251 (499)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred chhhhcccccccccccccchhhhhhh----ccccccccccceeeecccCChHHHHHHhhccceeEEEeecccccceEEee
Confidence 99999999999999999999999866 55678899999999999987778899999999999999999999999998
Q ss_pred HhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCC
Q 010506 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 255 ~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
.++ .+|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 252 ~~~--~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~ 329 (499)
T d1ky8a_ 252 VGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRD 329 (499)
T ss_dssp HHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTS
T ss_pred ccc--ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCCC
Confidence 765 689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE----ecCCCCcccccccccceeEeEEeCCH
Q 010506 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV----EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~----~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
+++++||+++..+++++++++++++.+|++++.||.... ..+..++++ .+++++.+++||+||||++|++|+|.
T Consensus 330 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~ 407 (499)
T d1ky8a_ 330 PTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDL 407 (499)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEE--TTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSH
T ss_pred ccccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccc--ccccccccccccccCCCCChhhhccccCceEEEEEcCCH
Confidence 999999999999999999999999999999999998633 233444432 34578999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeE
Q 010506 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~ 490 (508)
+|||+++|+++|||++||||+|.+.+++++ .++++|+|+||+++....+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 408 ~eai~~~n~~~~gLt~sv~s~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 485 (499)
T d1ky8a_ 408 DQAIELANGRPYGLDAAVFGRDVVKIRRAV--RLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKT 485 (499)
T ss_dssp HHHHHHHHTSSEESEEEEECCCHHHHHHHH--HHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEE
T ss_pred HHHHHHHhCCCCCCeEEEEcCCHHHHHHHH--HhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHHHHHHhhCEEE
Confidence 999999999999999999999999999999 779999999999877666789999999999999999999999999999
Q ss_pred EEEeCCCCC
Q 010506 491 CTINYGNEL 499 (508)
Q Consensus 491 v~~~~~~~~ 499 (508)
|+++|+++.
T Consensus 486 i~~~~~~~~ 494 (499)
T d1ky8a_ 486 IVFNYKGKG 494 (499)
T ss_dssp EEEECTTSS
T ss_pred EEEcCCCCC
Confidence 999997643
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=1e-89 Score=724.61 Aligned_cols=465 Identities=25% Similarity=0.460 Sum_probs=429.8
Q ss_pred CCCCceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHH
Q 010506 19 ETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (508)
Q Consensus 19 ~~~~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (508)
+.+++||||+|+.++++++++||+||+++++++.++.+|+++|+++|++|++.|+++|.++|.++|+++++.|++++++|
T Consensus 2 k~~~n~I~G~~~~~~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~l 81 (474)
T d1euha_ 2 KQYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKI 81 (474)
T ss_dssp CBCCEEETTEEECCSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccccceecCeecCCCCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46799999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCC-----cccCCCCCceeEEEEeecceEEEEeCCCCchhhhHH
Q 010506 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGS-----VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (508)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 173 (508)
++++++|+||+..+++.|+...++.++++.......... .......+...+.+++|+|||++|+|||||+...++
T Consensus 82 a~~~~~e~Gk~~~~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~~ 161 (474)
T d1euha_ 82 GAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGS 161 (474)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHH
T ss_pred HHHHHHHhCCCcchhccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhhhh
Confidence 999999999999999999999999999887765443221 111122344567789999999999999999999999
Q ss_pred HHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHH
Q 010506 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (508)
Q Consensus 174 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (508)
.+++||++||+||+|||+.+|.++.++ .+++.++|+|+|++|+|+| +.++++.|+.||+|+.|.||||+.+++.+
T Consensus 162 ~~~~aL~aGN~vV~Kps~~~~~~~~~l----~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i 237 (474)
T d1euha_ 162 KIAPALIAGNVIAFKPPTQGSISGLLL----AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 237 (474)
T ss_dssp HHHHHHHTTCEEEEECCSTTHHHHHHH----HHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred hchhhhhccccceecccccchHHHHHH----HHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccch
Confidence 999999999999999999999999876 5567889999999999999 57899999999999999999999999999
Q ss_pred HHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCC
Q 010506 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (508)
Q Consensus 253 ~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p 332 (508)
++.++ .+|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++++|++.++++...++.|++
T Consensus 238 ~~~a~--~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~ 315 (474)
T d1euha_ 238 GKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 315 (474)
T ss_dssp HHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCG
T ss_pred hhhcc--cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCc
Confidence 99876 7899999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHH
Q 010506 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (508)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ 411 (508)
.+. ..++|++.....+++.+.+......++..+.++. ..|+|++|||+ .+++++++++||+||||++|++|+|+|
T Consensus 316 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~d 391 (474)
T d1euha_ 316 EDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIK---REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVE 391 (474)
T ss_dssp GGT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC---EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHH
T ss_pred ccc-cccccccchHHHHHHHHHHHhhhcccccccccCC---CCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHH
Confidence 874 5689999999999999999999999888776554 36999999988 688999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 412 EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 412 eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+++...+..+||||+|.||+|+++|++|+++||+.|+|
T Consensus 392 eai~~~n~~~~glta~v~s~d~~~~~~~~--~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 469 (474)
T d1euha_ 392 EAIEISNKSEYGLQASIFTNDFPRAFGIA--EQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSV 469 (474)
T ss_dssp HHHHHHHHSSEESEEEEECSCHHHHHHHH--HHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHHCCCCCCeEEEEeCCHHHHHHHH--HhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHHHHHHhCcEEEE
Confidence 99999999999999999999999999999 7899999999998877777899999999999999999999999999999
Q ss_pred EEeC
Q 010506 492 TINY 495 (508)
Q Consensus 492 ~~~~ 495 (508)
++++
T Consensus 470 ~~~~ 473 (474)
T d1euha_ 470 VFDI 473 (474)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9985
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.6e-83 Score=669.82 Aligned_cols=423 Identities=22% Similarity=0.335 Sum_probs=379.2
Q ss_pred HHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcC
Q 010506 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNG 136 (508)
Q Consensus 58 v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~ 136 (508)
|++|+++||+||+.|+.+|.++|.++|+++++.|++++++|+++++.|+||+..+++ .|+...++.+++++........
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 789999999999999999999999999999999999999999999999999999986 6999999999888765544322
Q ss_pred C-c--ccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCC
Q 010506 137 S-V--IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL 213 (508)
Q Consensus 137 ~-~--~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGl 213 (508)
. . ..........+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..++++ ++ .++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~----~~-~~~ 156 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATL----IP-QYM 156 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHH----HH-HHS
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccc----cc-ccc
Confidence 2 1 11222344667889999999999999999999999999999999999999999999999877554 33 368
Q ss_pred CCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHH
Q 010506 214 PGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAV 293 (508)
Q Consensus 214 P~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~ 293 (508)
|+++++++.++......+. ++.+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~-~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~ 235 (446)
T d1ad3a_ 157 DQNLYLVVKGGVPETTELL-KERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235 (446)
T ss_dssp CTTTEEECCCSHHHHHHHT-TSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH
T ss_pred cccccccccccchhhhhhc-ccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh
Confidence 9999999998655555554 678999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC
Q 010506 294 GTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373 (508)
Q Consensus 294 ~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~ 373 (508)
.|+||.|++++|||||++++|+|+++|.+.++.+ +|+|.+.++++||+++..+.+++..+++. ++...|+.. +
T Consensus 236 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~-----a~~~~g~~~-~ 308 (446)
T d1ad3a_ 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGTW-D 308 (446)
T ss_dssp TTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTT-----SCEEECCCE-E
T ss_pred cCCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccc-----hhcccceee-c
Confidence 9999999999999999999999999999998887 79999999999999999999998877653 444444433 5
Q ss_pred CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEE
Q 010506 374 SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNV 452 (508)
Q Consensus 374 ~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~i 452 (508)
..++|+.|||+ ++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++ .++++|+|+|
T Consensus 309 ~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~--~~l~~G~v~i 386 (446)
T d1ad3a_ 309 QSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMI--AETSSGGVTA 386 (446)
T ss_dssp TTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHH--TTCCCSEEEE
T ss_pred CCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHH--HhCCEeEEEE
Confidence 67899999987 79999999999999999999999999999999999999999999999999999999 8899999999
Q ss_pred cCCCC-CCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010506 453 NIPTN-GAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 453 N~~~~-~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
|.++. ...+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 387 N~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 430 (446)
T d1ad3a_ 387 NDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKS 430 (446)
T ss_dssp SSSSGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEECC
T ss_pred eCCccCCCCCCCCccccccceeccchHHHHHHHHhceeEEEEcc
Confidence 98654 34567899999999999999999999999999999864
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=1.3e-81 Score=664.25 Aligned_cols=450 Identities=18% Similarity=0.234 Sum_probs=380.8
Q ss_pred CCCeEEeecCCCCceEE-EEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh
Q 010506 32 HGPTVSSINPVNNQKIA-TVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL 110 (508)
Q Consensus 32 ~~~~~~v~~P~~g~~i~-~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 110 (508)
++++|+++||+||+.|+ .++.++.+|+++|+++|++|++.|++++.++|.++|+++++.|++++++|+++++.|+|||.
T Consensus 1 t~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~ 80 (504)
T d1ez0a_ 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPE 80 (504)
T ss_dssp CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 46789999999999997 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhcCCcc------c--CCCCCceeEEEEeecceEEEEeCCCCchhhh--HHHHHHHhh
Q 010506 111 PEGIGEVQEVIDMCDFAVGLSRQLNGSVI------P--SERPNHMMLETWNPLGVVGVITAFNFPCAVL--GWNACIALV 180 (508)
Q Consensus 111 ~~a~~ev~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l~~ALa 180 (508)
.+++.|+...++.++|+++..+....... + ...+.......+.|+|||++|+|||||+... .+++++||+
T Consensus 81 ~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALa 160 (504)
T d1ez0a_ 81 VRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALA 160 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHH
Confidence 99999999999999999987665332211 1 1122335567888999999999999998644 458999999
Q ss_pred cCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhc
Q 010506 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (508)
Q Consensus 181 aGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (508)
+||+||+|||+.+|.++.++.+++.++++++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.++++
T Consensus 161 aGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~ 240 (504)
T d1ez0a_ 161 AGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER 240 (504)
T ss_dssp HTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHS
T ss_pred HhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhcc
Confidence 9999999999999999999999999999999999999999999 788999999999999999999999999999999999
Q ss_pred cCcee--eccCccCeEEEcCCCCHHHHH--HHHHHHHHhhcCCCcCCCceEEEecccHH-HHHHHHHHhhhhcccCCCCC
Q 010506 260 FGKCL--LELSGNNAIIIMDDADIKLAV--RSVLFAAVGTAGQRCTTCRRLLIHESIYQ-TVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 260 ~~~~~--~elgG~~~~iV~~daDl~~aa--~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~-~f~~~L~~~~~~~~~g~p~~ 334 (508)
++|+. +|+|||||+||++|||++.|+ +.+++++|.|+||.|++++++||+++.++ .|++.+.+.++. + +
T Consensus 241 ~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~---~ 314 (504)
T d1ez0a_ 241 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q---S 314 (504)
T ss_dssp SSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C---C
T ss_pred cccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh---c---c
Confidence 88765 499999999999999999875 47999999999999999999998888654 566666655443 3 3
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE----ecCCCCcccccccccceeEeEEeCCH
Q 010506 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV----EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~----~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
+++.+||+++..+.+++ ++.+...+++++.|+.. +.+..|+++ ++..++++++||+||||++|++|+|+
T Consensus 315 ~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~ 387 (504)
T d1ez0a_ 315 PSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENV 387 (504)
T ss_dssp CBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC----TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSH
T ss_pred cccccccchhhhhhhhh---hhhhhhhhhhccccccc----ccccCCccccccccccccchhhcccccCCeeeeeecCCH
Confidence 46789999988776665 56666778888887753 445556543 23346889999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCH--HHHHHhhcccCcceeEEEEcCCCCCCC------CCCCccCCCCCCCCCcchHHHH
Q 010506 411 EEAVKINNSVPQGLSSSIFTRSP--ENIFKWLGPHGSDTGIVNVNIPTNGAE------IGGAFGGEKATGGGREAGSDSW 482 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~--~~~~~~~~~~~~~~g~V~iN~~~~~~~------~~~pfGG~~~SG~g~~~g~~~~ 482 (508)
+|||+++|+++|||+++|||+|. .++.+++++.+..+|+|+||.++++.. .+.||||.+.||.| ..|.+++
T Consensus 388 ~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G~~~i 466 (504)
T d1ez0a_ 388 ADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVGAEAI 466 (504)
T ss_dssp HHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSSGGGG
T ss_pred HHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cchHHHH
Confidence 99999999999999999999754 578888833233489999998654322 23488899999955 4689999
Q ss_pred HHhhheeEEEEeCC
Q 010506 483 KQYMRRSTCTINYG 496 (508)
Q Consensus 483 ~~~~~~k~v~~~~~ 496 (508)
++|+++.+ +.+++
T Consensus 467 ~~f~r~v~-~q~~p 479 (504)
T d1ez0a_ 467 HRWLRPVA-YQALP 479 (504)
T ss_dssp GGGEEEEE-EESCC
T ss_pred HHHhchhh-hccCC
Confidence 99987643 34554
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=8.1e-65 Score=524.72 Aligned_cols=390 Identities=19% Similarity=0.234 Sum_probs=316.5
Q ss_pred HHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhh------------HHHHHHH
Q 010506 56 EDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGE------------VQEVIDM 123 (508)
Q Consensus 56 ~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e------------v~~~~~~ 123 (508)
+|+++++++|++||+.|+.+|.++|.++|++++++|++|+++|++++++|+||+..+++.| ++.+++.
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccccHHHHHHHhccHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999887655 5566777
Q ss_pred HHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHH
Q 010506 124 CDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKL 203 (508)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~ 203 (508)
+++++...+...+.......+ ......++|+|+++++.|||||+.++++++++||++||+||+|||+.+|.++..++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l 159 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDSWVRE-DGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSA 159 (414)
T ss_dssp HHHHHHSCCCTTCEEEEEECT-TSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHhhhhccccccccccc-cccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhH
Confidence 777776655544433322222 2345678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccC-eEEEcCCCCH
Q 010506 204 VSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN-AIIIMDDADI 281 (508)
Q Consensus 204 l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~-~~iV~~daDl 281 (508)
+.+++...|+|.++++.+.+ +.+....+..++.+. |+||+..++.+.+.++++.+++++|+||+| ++||++|||+
T Consensus 160 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~ 236 (414)
T d1o20a_ 160 IREALKETEIPESSVEFIENTDRSLVLEMIRLREYL---SLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADL 236 (414)
T ss_dssp HHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTC---SEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCH
T ss_pred HHhhhhhccccccccccccccchhhhhhcccccccC---eEEEcccHHHHHHHhhhccccceecccCCCCCeecccccch
Confidence 99999999999999998876 555555555544443 333333344566677777888888888755 5888999999
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHC
Q 010506 282 KLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQ 361 (508)
Q Consensus 282 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ 361 (508)
+.|++.+++++|.| ||.|++++|+|||+++||+|+++|.+...+..++++.+. ... .
T Consensus 237 ~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~--------------~~~----~---- 293 (414)
T d1o20a_ 237 KKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCE--------------KTR----E---- 293 (414)
T ss_dssp HHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECH--------------HHH----H----
T ss_pred hhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccch--------------hhh----h----
Confidence 99999999998876 999999999999999999999999998887665543321 100 0
Q ss_pred CCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhc
Q 010506 362 GGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLG 441 (508)
Q Consensus 362 ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~ 441 (508)
+.+.+. ......+++|+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 294 -----------------~~~~~~--~~~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~- 353 (414)
T d1o20a_ 294 -----------------IVPDVV--PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFV- 353 (414)
T ss_dssp -----------------HSTTSE--ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHH-
T ss_pred -----------------hcccce--ecccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHH-
Confidence 001111 112356789999999999999999999999999999999999999999999999
Q ss_pred ccCcceeEEEEcCCCCCCCCCCCccCCCCCCC--CCcc--hHHHHHHhhheeEEEEe
Q 010506 442 PHGSDTGIVNVNIPTNGAEIGGAFGGEKATGG--GREA--GSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 442 ~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~--g~~~--g~~~~~~~~~~k~v~~~ 494 (508)
.++++|+|+||.++.+.+ +.|||+.|.+|+ |+.| |++|+++||+.|+|++.
T Consensus 354 -~~i~~G~V~IN~~~~~~~-~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~ 408 (414)
T d1o20a_ 354 -SEIDAAAVYVNASTRFTD-GGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLG 408 (414)
T ss_dssp -HHCCSSEEEESSCGGGCS-TTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEEC
T ss_pred -HhCCeeEEEEeCCCcCCC-CCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEEC
Confidence 889999999999875543 456665555554 4443 89999999999999764
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.6e-55 Score=450.56 Aligned_cols=402 Identities=18% Similarity=0.167 Sum_probs=285.1
Q ss_pred HHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHH------HhCCChhhh----h---hhHHHHHHH
Q 010506 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSI------EMGKILPEG----I---GEVQEVIDM 123 (508)
Q Consensus 57 ~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~------e~Gk~~~~a----~---~ev~~~~~~ 123 (508)
+++++++.|++|++.|+.++.++|.++|+++++.|+++.++++++..+ +.|++...- . ..+..+++.
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~ 83 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 83 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHH
Confidence 567889999999999999999999999999999999999999886444 445543211 1 135566666
Q ss_pred HHHHhhhhhhhcCCcccCC-CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHH
Q 010506 124 CDFAVGLSRQLNGSVIPSE-RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202 (508)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~ 202 (508)
++..+.+.++......... ..+...+..+.|+||+++| |+++| ..+++..++||++||+||+||++.++.|+..+++
T Consensus 84 l~~i~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~~ 161 (436)
T d1vlua_ 84 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 161 (436)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHHhccccceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHHH
Confidence 7766655444322111111 1234556778899999988 66777 5677788999999999999999999999998888
Q ss_pred HHH----HHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCC
Q 010506 203 LVS----EVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (508)
Q Consensus 203 ~l~----~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~d 278 (508)
+++ +++.++|+|++++++++++.+.++.|..|++||.|+||||...++.+.+.+. .|++.++|||+|+||++|
T Consensus 162 ~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---~pvi~~~~G~~~~~Vd~~ 238 (436)
T d1vlua_ 162 IVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGICSIYLDED 238 (436)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---SCBTTBCSCCEEEEECTT
T ss_pred HHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecCCceeeeeecccc---ceEEEecCCccceeeccc
Confidence 876 5567789999999999988888999999999999999999999888876653 699999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHH
Q 010506 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENI 358 (508)
Q Consensus 279 aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a 358 (508)
||+++|++.++.++|+++|| |++.++++||+++++.|...+...... |. .+. .+.. +.......
T Consensus 239 ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~---gv------~l~--~~~~----~~~~~~~~ 302 (436)
T d1vlua_ 239 ADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEG---GV------TIH--ATKD----LKTAYFDK 302 (436)
T ss_dssp CCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHH---CC------CBE--ECHH----HHHHHHHH
T ss_pred ccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhC---Cc------EEE--eCHH----HHHHhhhh
Confidence 99999999999999999995 999999999999998875544333332 10 000 0111 11112111
Q ss_pred HHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHH
Q 010506 359 KSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438 (508)
Q Consensus 359 ~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~ 438 (508)
....+. ..+....|++... ....|.+|+|+|+++|++|+|+||||+++|++++|||++|||+|.+.+++
T Consensus 303 ~~~~~~---------~~~~~~~~~~~~~--~~~d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~ 371 (436)
T d1vlua_ 303 LNELGK---------LTEAIQCKTVDAD--EEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEK 371 (436)
T ss_dssp HHHHTC---------CCHHHHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHH
T ss_pred hhhccc---------ccccccccccCCC--cccchhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHH
Confidence 111111 0112223332211 22347899999999999999999999999999999999999999999999
Q ss_pred hhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCC--CCc--chHHHHHHhhheeEEEE
Q 010506 439 WLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGG--GRE--AGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 439 ~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~--g~~--~g~~~~~~~~~~k~v~~ 493 (508)
|+ +++++|.|+||+++.+.+ +.+||--..-|+ ++. .|+.|++++|..|++..
T Consensus 372 F~--~~vda~~V~vNasTrf~D-g~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~ 427 (436)
T d1vlua_ 372 FM--KGVDSSGVYWNASTRFAD-GFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIR 427 (436)
T ss_dssp HH--HHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEE
T ss_pred HH--HhCCceEEEEcCCCccCC-CCcccCcceeeEecCCCCCCCCcChHHhceEEEEEE
Confidence 99 889999999999987654 555652222233 333 59999999999999876
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=97.68 E-value=0.028 Score=54.27 Aligned_cols=325 Identities=16% Similarity=0.122 Sum_probs=180.2
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHHHHHHHhC-C---ChhhhhhhHHHH--------HHHHHHHhhhhhhhcC----C-cc
Q 010506 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMG-K---ILPEGIGEVQEV--------IDMCDFAVGLSRQLNG----S-VI 139 (508)
Q Consensus 77 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~G-k---~~~~a~~ev~~~--------~~~~~~~~~~~~~~~~----~-~~ 139 (508)
.++..+..+.+.+.++.+-|.-....++..- . .+.-...|+..+ .+.++......+.... . ..
T Consensus 26 ~~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~~~~ 105 (431)
T d1k75a_ 26 SESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVD 105 (431)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred cHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCCCce
Confidence 3445566667777777777766666666552 1 111122333322 2223333322222111 1 11
Q ss_pred cCCCCCceeEEEEeecceEEEEeCCC---CchhhhHHHHHHHhhcCC--EEEeeCCCCChhHHHHHHHHHHHHHHhCCCC
Q 010506 140 PSERPNHMMLETWNPLGVVGVITAFN---FPCAVLGWNACIALVCGN--CVVWKGAPTTPLITIAITKLVSEVFERNKLP 214 (508)
Q Consensus 140 ~~~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~l~~ALaaGN--~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP 214 (508)
....++......+.|+--|++..|.- ||-.. +...+||-.+|. .|+.-|....|.+- -+...+|+-
T Consensus 106 ~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsv-LM~aiPAkvAGV~~Ivv~tPp~~~~~~l--------~aa~~~Gv~ 176 (431)
T d1k75a_ 106 VETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTV-LMLATPASIAGCKKVVLCSPPPIADEIL--------YAAQLCGVQ 176 (431)
T ss_dssp EEEETTEEEEEEEEECSEEEEECCCSSSCCHHHH-HHHHHHHHHHTCSEEEEEECSSCCHHHH--------HHHHHTTCC
T ss_pred eeccCCceeeeeeeehhhheeeccCCCccchHHH-HHHHHHHHhcCCCceeEEeCCCCcchHH--------HHHHHcCcc
Confidence 11224455667889999999999966 77544 447789999987 45667776565431 123556654
Q ss_pred CCeEEEecCChhhHHHHHc----CCCcCEEEEeCCHHHHHHHHHHhhhccCceee-ccCccC--eEEEcCCCCHHHHHHH
Q 010506 215 GAIFTSFCGGAEIGQAIAK----DPRISLVSFTGSTKVGLMVQQTVHQRFGKCLL-ELSGNN--AIIIMDDADIKLAVRS 287 (508)
Q Consensus 215 ~g~~~~v~g~~~~~~~L~~----~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~-elgG~~--~~iV~~daDl~~aa~~ 287 (508)
+ ++. -||.+.-.+|.- -|+||.|+=.|+.=+..+=.+..++.. .+-. -+-|.+ -+|-++++|.+.++..
T Consensus 177 ~-iy~--~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~-~vgID~~aGPSEv~viAD~~a~p~~iAaD 252 (431)
T d1k75a_ 177 D-VFN--VGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASD 252 (431)
T ss_dssp E-EEE--CCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTT-SCEESCCCCCCEEEEEECTTSCHHHHHHH
T ss_pred c-eEe--cCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCC-ccccccccCCceEEEEecCCCCHHHHHHH
Confidence 3 222 256666666653 678999998888765544222222111 1111 112333 3455567899999888
Q ss_pred HHHHHHhhcCCCcCCCceEEEecc--cHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeE
Q 010506 288 VLFAAVGTAGQRCTTCRRLLIHES--IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI 365 (508)
Q Consensus 288 i~~~~~~~~Gq~C~a~~~v~V~~~--i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v 365 (508)
++.-+=.... .+.++|..+ ..+++.+.+.+.+..+. . . .+ ++...
T Consensus 253 llaQAEH~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l~----r-----------~----~i---~~~s~------ 299 (431)
T d1k75a_ 253 LLSQAEHGPD-----SQVILLTPAADMARRVAEAVERQLAELP----R-----------A----ET---ARQAL------ 299 (431)
T ss_dssp HHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHHHTCS----S-----------C----HH---HHHHH------
T ss_pred HHhccCCccc-----ceeEEEeccHHHHHHHHHHHHHHhhhch----H-----------H----HH---HHhhh------
Confidence 8766544333 344666655 23444444444443321 0 0 00 11111
Q ss_pred eeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCc
Q 010506 366 LTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGS 445 (508)
Q Consensus 366 ~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~ 445 (508)
+-. .++.++|++|+++++|..-.= -..|.++|.+....-. .
T Consensus 300 ------------------------------~~~----~ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~~~~~~i----~ 340 (431)
T d1k75a_ 300 ------------------------------NAS----RLIVTKDLAQCVEISNQYGPE-HLIIQTRNARELVDSI----T 340 (431)
T ss_dssp ------------------------------TTC----EEEECSSHHHHHHHHHHHCCS-EEEEESTTHHHHGGGC----C
T ss_pred ------------------------------ccc----eEEEecCHHHHHHHHHhhhHH-HHHHHhcCHHHHHhhh----h
Confidence 011 244679999999999986433 3778888887654433 4
Q ss_pred ceeEEEEcCCCC--------CCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010506 446 DTGIVNVNIPTN--------GAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 446 ~~g~V~iN~~~~--------~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
.+|.|++...++ +.+.-+|-|| ..|+.+.-+...|+++.++
T Consensus 341 nAGsIflG~~sp~a~GDY~aGpnHvLPT~G-----~Ar~~sgLsv~dF~k~~s~ 389 (431)
T d1k75a_ 341 SAGSVFLGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTV 389 (431)
T ss_dssp CCSEEEESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCCCGGGGEEEEEE
T ss_pred hcchhhcCCCCcchhhccccCCCccCCCCC-----ceeecCCCCHHHeeeeeeE
Confidence 789999987553 2223345544 5555555667888887665
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