Query 010507
Match_columns 508
No_of_seqs 273 out of 1836
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 01:20:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010507.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010507hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1169 Diacylglycerol kinase 100.0 1.1E-72 2.3E-77 607.3 21.8 398 28-508 214-621 (634)
2 KOG0782 Predicted diacylglycer 100.0 3.3E-60 7.2E-65 495.8 18.3 375 29-499 301-689 (1004)
3 PRK12361 hypothetical protein; 100.0 1.5E-43 3.2E-48 387.6 30.0 349 15-505 166-539 (547)
4 PRK13057 putative lipid kinase 100.0 3.8E-42 8.3E-47 347.7 29.9 273 84-505 1-282 (287)
5 PRK11914 diacylglycerol kinase 100.0 6.4E-42 1.4E-46 348.8 31.2 285 79-505 7-301 (306)
6 TIGR03702 lip_kinase_YegS lipi 100.0 1E-41 2.2E-46 345.7 29.0 280 82-505 1-285 (293)
7 PRK13059 putative lipid kinase 100.0 2.2E-41 4.7E-46 344.0 30.7 281 80-506 1-291 (295)
8 PRK13337 putative lipid kinase 100.0 1.7E-41 3.8E-46 345.7 27.8 282 80-505 1-291 (304)
9 PRK00861 putative lipid kinase 100.0 3.8E-41 8.3E-46 342.2 29.2 280 80-505 2-294 (300)
10 PRK13055 putative lipid kinase 100.0 4.3E-41 9.3E-46 347.5 29.8 286 80-506 2-299 (334)
11 PRK13054 lipid kinase; Reviewe 100.0 2.5E-40 5.4E-45 336.6 30.5 282 79-505 2-291 (300)
12 TIGR00147 lipid kinase, YegS/R 100.0 4.2E-40 9E-45 332.9 29.5 280 80-504 1-291 (293)
13 COG1597 LCB5 Sphingosine kinas 100.0 2.1E-39 4.6E-44 330.9 28.7 284 79-506 1-294 (301)
14 KOG1170 Diacylglycerol kinase 100.0 3.3E-42 7.1E-47 371.7 6.5 174 303-503 614-789 (1099)
15 PLN02958 diacylglycerol kinase 100.0 1.4E-38 3E-43 343.2 29.8 300 78-505 109-463 (481)
16 PF00609 DAGK_acc: Diacylglyce 100.0 3.8E-35 8.1E-40 274.1 11.2 160 303-480 1-161 (161)
17 PLN02204 diacylglycerol kinase 100.0 9.9E-32 2.1E-36 291.8 30.3 318 76-504 155-594 (601)
18 KOG1116 Sphingosine kinase, in 99.9 6.5E-25 1.4E-29 235.2 22.7 315 77-507 176-566 (579)
19 smart00045 DAGKa Diacylglycero 99.9 8.3E-23 1.8E-27 190.4 9.8 160 303-480 1-160 (160)
20 PF00781 DAGK_cat: Diacylglyce 99.9 3.6E-22 7.7E-27 179.4 10.1 100 82-198 1-102 (130)
21 smart00046 DAGKc Diacylglycero 99.8 6.1E-20 1.3E-24 164.5 11.1 98 84-198 1-98 (124)
22 KOG1115 Ceramide kinase [Lipid 99.6 1E-14 2.3E-19 150.6 16.1 314 77-500 155-501 (516)
23 KOG4435 Predicted lipid kinase 99.0 2.1E-09 4.5E-14 111.6 11.2 109 74-198 54-163 (535)
24 PRK03708 ppnK inorganic polyph 98.1 1.1E-05 2.4E-10 82.2 10.3 95 82-197 2-98 (277)
25 PRK02645 ppnK inorganic polyph 98.0 4E-05 8.7E-10 79.2 10.8 89 79-188 2-92 (305)
26 COG3199 Predicted inorganic po 97.6 0.00031 6.8E-09 72.9 9.8 39 146-192 99-137 (355)
27 PRK03378 ppnK inorganic polyph 97.5 0.00067 1.5E-08 69.8 11.5 98 79-197 4-105 (292)
28 PRK01231 ppnK inorganic polyph 97.2 0.0035 7.7E-08 64.6 12.1 92 80-188 4-96 (295)
29 PRK14075 pnk inorganic polypho 96.9 0.63 1.4E-05 47.1 24.8 41 455-505 194-234 (256)
30 PRK02155 ppnK NAD(+)/NADH kina 96.7 0.02 4.4E-07 58.9 12.4 93 80-188 5-97 (291)
31 PF01513 NAD_kinase: ATP-NAD k 96.7 0.0071 1.5E-07 61.8 8.9 38 145-189 74-111 (285)
32 PRK14077 pnk inorganic polypho 96.7 0.024 5.1E-07 58.3 12.5 91 78-188 8-98 (287)
33 PRK03372 ppnK inorganic polyph 96.5 0.031 6.7E-07 58.0 12.4 92 78-188 3-106 (306)
34 PRK04539 ppnK inorganic polyph 96.4 0.026 5.6E-07 58.3 11.3 95 78-188 3-102 (296)
35 PRK02649 ppnK inorganic polyph 96.4 0.048 1E-06 56.6 12.8 96 80-188 1-102 (305)
36 PRK01911 ppnK inorganic polyph 96.1 0.083 1.8E-06 54.5 12.7 88 82-188 2-98 (292)
37 PRK03501 ppnK inorganic polyph 96.0 0.061 1.3E-06 54.7 11.3 72 80-187 2-74 (264)
38 PLN02935 Bifunctional NADH kin 94.7 0.15 3.3E-06 56.1 9.3 35 147-188 262-296 (508)
39 PRK00561 ppnK inorganic polyph 94.4 0.13 2.8E-06 52.2 7.6 36 146-188 32-67 (259)
40 PRK14076 pnk inorganic polypho 93.0 1.1 2.3E-05 50.6 12.5 90 80-188 290-382 (569)
41 PRK04885 ppnK inorganic polyph 92.9 1 2.2E-05 46.0 11.0 70 82-188 2-71 (265)
42 PLN02727 NAD kinase 91.7 0.59 1.3E-05 54.8 8.5 92 78-188 676-777 (986)
43 PRK04761 ppnK inorganic polyph 91.0 0.43 9.2E-06 48.2 5.8 36 146-188 24-59 (246)
44 COG0061 nadF NAD kinase [Coenz 90.7 3.7 8.1E-05 42.0 12.5 36 146-188 54-89 (281)
45 PRK02231 ppnK inorganic polyph 90.6 1.1 2.3E-05 46.0 8.3 35 147-188 42-76 (272)
46 PLN02929 NADH kinase 90.3 1.1 2.4E-05 46.5 8.2 35 146-188 63-97 (301)
47 PRK01185 ppnK inorganic polyph 89.9 2.7 5.9E-05 43.0 10.6 43 456-504 207-250 (271)
48 PF10254 Pacs-1: PACS-1 cytoso 80.9 4.4 9.6E-05 43.9 7.1 51 147-198 75-128 (414)
49 KOG4180 Predicted kinase [Gene 74.2 3.5 7.6E-05 43.2 3.9 32 146-183 104-135 (395)
50 cd08186 Fe-ADH8 Iron-containin 73.1 17 0.00036 38.8 8.9 105 81-197 27-148 (383)
51 cd08197 DOIS 2-deoxy-scyllo-in 71.0 13 0.00029 39.3 7.5 96 81-191 24-125 (355)
52 cd08170 GlyDH Glycerol dehydro 69.1 26 0.00057 36.7 9.2 94 81-194 23-119 (351)
53 cd08169 DHQ-like Dehydroquinat 68.8 20 0.00044 37.7 8.3 98 81-193 24-126 (344)
54 cd08171 GlyDH-like2 Glycerol d 67.4 28 0.00061 36.5 9.0 89 81-189 23-115 (345)
55 PF00731 AIRC: AIR carboxylase 67.4 29 0.00062 32.6 8.0 70 92-169 8-78 (150)
56 cd08194 Fe-ADH6 Iron-containin 67.3 32 0.0007 36.4 9.5 100 81-193 24-139 (375)
57 cd08181 PPD-like 1,3-propanedi 64.9 32 0.0007 36.3 8.9 103 81-195 26-143 (357)
58 KOG2178 Predicted sugar kinase 62.9 3.8 8.3E-05 43.9 1.5 36 146-188 167-202 (409)
59 cd08187 BDH Butanol dehydrogen 62.9 34 0.00073 36.4 8.6 104 81-196 29-148 (382)
60 cd08172 GlyDH-like1 Glycerol d 62.9 43 0.00093 35.1 9.3 92 81-193 24-117 (347)
61 cd07766 DHQ_Fe-ADH Dehydroquin 61.9 28 0.00061 35.9 7.7 93 81-191 24-117 (332)
62 TIGR01162 purE phosphoribosyla 60.1 39 0.00084 32.0 7.4 76 97-189 11-87 (156)
63 PRK00002 aroB 3-dehydroquinate 59.4 32 0.00069 36.3 7.6 97 81-192 32-134 (358)
64 TIGR03405 Phn_Fe-ADH phosphona 59.4 65 0.0014 34.0 9.9 104 81-195 24-145 (355)
65 cd08173 Gro1PDH Sn-glycerol-1- 58.8 56 0.0012 34.1 9.3 90 81-191 26-115 (339)
66 cd08551 Fe-ADH iron-containing 58.6 44 0.00096 35.2 8.6 101 81-194 24-140 (370)
67 cd08185 Fe-ADH1 Iron-containin 58.5 54 0.0012 34.8 9.2 106 81-198 26-152 (380)
68 cd08195 DHQS Dehydroquinate sy 57.2 35 0.00076 35.7 7.5 94 81-186 25-119 (345)
69 cd08179 NADPH_BDH NADPH-depend 56.2 49 0.0011 35.1 8.5 102 81-194 24-144 (375)
70 cd08177 MAR Maleylacetate redu 56.0 51 0.0011 34.4 8.4 86 81-186 24-109 (337)
71 PRK09423 gldA glycerol dehydro 55.1 79 0.0017 33.4 9.8 93 81-193 30-125 (366)
72 cd08180 PDD 1,3-propanediol de 53.6 56 0.0012 34.0 8.2 100 81-193 23-126 (332)
73 COG1979 Uncharacterized oxidor 53.4 34 0.00073 36.3 6.4 80 79-169 28-111 (384)
74 cd08192 Fe-ADH7 Iron-containin 52.7 79 0.0017 33.4 9.3 74 81-167 25-100 (370)
75 TIGR01357 aroB 3-dehydroquinat 52.1 52 0.0011 34.4 7.7 91 81-186 21-115 (344)
76 PF13685 Fe-ADH_2: Iron-contai 51.2 46 0.001 33.7 6.9 93 81-191 20-112 (250)
77 PRK15138 aldehyde reductase; P 51.0 73 0.0016 34.1 8.8 104 81-196 30-150 (387)
78 PLN00180 NDF6 (NDH-dependent f 50.1 3.6 7.9E-05 38.6 -1.1 15 152-166 129-143 (180)
79 PRK09860 putative alcohol dehy 48.8 89 0.0019 33.4 9.0 105 81-198 32-152 (383)
80 cd08550 GlyDH-like Glycerol_de 48.5 82 0.0018 33.0 8.6 93 81-193 23-118 (349)
81 smart00195 DSPc Dual specifici 47.8 6.1 0.00013 35.2 0.0 34 15-48 69-103 (138)
82 cd08176 LPO Lactadehyde:propan 46.9 60 0.0013 34.4 7.3 105 81-198 29-149 (377)
83 cd08178 AAD_C C-terminal alcoh 45.6 93 0.002 33.3 8.6 74 81-167 22-97 (398)
84 TIGR02638 lactal_redase lactal 44.8 1.1E+02 0.0024 32.5 8.9 103 81-196 30-150 (379)
85 cd08174 G1PDH-like Glycerol-1- 41.9 1.3E+02 0.0028 31.3 8.8 37 147-190 75-111 (331)
86 PRK10624 L-1,2-propanediol oxi 41.8 1.2E+02 0.0027 32.2 8.8 105 81-198 31-153 (382)
87 PF00465 Fe-ADH: Iron-containi 41.1 76 0.0016 33.4 7.0 101 82-195 23-140 (366)
88 PF00782 DSPc: Dual specificit 40.2 14 0.0003 32.5 1.1 35 15-49 64-99 (133)
89 COG1454 EutG Alcohol dehydroge 39.8 2E+02 0.0043 31.1 9.9 106 80-198 29-150 (377)
90 PRK06203 aroB 3-dehydroquinate 38.3 1.6E+02 0.0035 31.6 9.0 98 80-186 42-145 (389)
91 cd08199 EEVS 2-epi-5-epi-valio 38.2 1E+02 0.0023 32.6 7.5 95 80-186 26-122 (354)
92 PTZ00286 6-phospho-1-fructokin 37.9 83 0.0018 34.8 6.8 51 146-198 175-228 (459)
93 PLN02834 3-dehydroquinate synt 37.6 1.1E+02 0.0024 33.4 7.8 94 81-187 101-198 (433)
94 PLN02948 phosphoribosylaminoim 37.4 1.8E+02 0.0039 33.1 9.5 88 81-189 411-499 (577)
95 PRK00843 egsA NAD(P)-dependent 37.1 1.2E+02 0.0026 31.8 7.7 90 81-191 35-124 (350)
96 cd08198 DHQS-like2 Dehydroquin 36.4 2.3E+02 0.0051 30.3 9.8 100 80-187 30-134 (369)
97 PRK15454 ethanol dehydrogenase 36.3 1.2E+02 0.0026 32.5 7.7 89 99-197 65-169 (395)
98 TIGR02483 PFK_mixed phosphofru 35.9 1.4E+02 0.003 31.5 7.8 40 146-193 93-132 (324)
99 TIGR02482 PFKA_ATP 6-phosphofr 35.0 1.4E+02 0.0031 31.0 7.7 41 146-193 90-130 (301)
100 cd08182 HEPD Hydroxyethylphosp 34.8 2.3E+02 0.005 29.9 9.4 46 146-192 76-139 (367)
101 cd08549 G1PDH_related Glycerol 34.0 1.3E+02 0.0029 31.3 7.4 87 81-188 25-114 (332)
102 cd08189 Fe-ADH5 Iron-containin 33.9 2.2E+02 0.0049 30.1 9.2 102 81-195 27-145 (374)
103 cd00127 DSPc Dual specificity 33.6 14 0.0003 32.5 0.0 33 16-48 73-106 (139)
104 cd08175 G1PDH Glycerol-1-phosp 33.1 1.3E+02 0.0027 31.6 7.1 89 81-188 24-114 (348)
105 cd00763 Bacterial_PFK Phosphof 33.1 1.6E+02 0.0034 30.9 7.7 40 146-193 91-130 (317)
106 cd08184 Fe-ADH3 Iron-containin 32.1 2.1E+02 0.0045 30.3 8.5 48 147-195 81-142 (347)
107 PF12138 Spherulin4: Spherulat 31.5 54 0.0012 33.3 3.8 19 78-96 28-46 (253)
108 PRK09267 flavodoxin FldA; Vali 31.1 1.8E+02 0.004 26.8 7.1 28 80-109 1-28 (169)
109 cd08190 HOT Hydroxyacid-oxoaci 30.2 2.7E+02 0.0059 30.0 9.2 71 81-164 24-96 (414)
110 COG2453 CDC14 Predicted protei 29.6 22 0.00048 33.8 0.7 35 14-48 95-130 (180)
111 cd08193 HVD 5-hydroxyvalerate 28.1 3.1E+02 0.0066 29.0 9.0 100 81-193 27-142 (376)
112 PRK06830 diphosphate--fructose 28.0 2E+02 0.0043 31.7 7.7 51 146-198 171-224 (443)
113 PF12219 End_tail_spike: Catal 28.0 32 0.00069 31.9 1.3 15 147-161 84-98 (160)
114 PRK00536 speE spermidine synth 27.7 43 0.00093 34.2 2.4 19 146-164 72-91 (262)
115 PRK14021 bifunctional shikimat 27.1 2.3E+02 0.0051 31.8 8.3 36 146-186 268-303 (542)
116 cd01836 FeeA_FeeB_like SGNH_hy 26.9 1.1E+02 0.0024 28.2 5.0 39 150-194 44-82 (191)
117 cd08191 HHD 6-hydroxyhexanoate 26.9 3.5E+02 0.0077 28.8 9.3 102 81-195 23-140 (386)
118 cd00363 PFK Phosphofructokinas 26.2 2.3E+02 0.0049 30.0 7.5 46 146-193 91-136 (338)
119 PRK03202 6-phosphofructokinase 26.0 2.4E+02 0.0052 29.6 7.6 40 146-193 92-131 (320)
120 PLN02564 6-phosphofructokinase 25.5 2.2E+02 0.0048 31.8 7.5 46 146-193 175-220 (484)
121 PTZ00393 protein tyrosine phos 25.1 22 0.00048 35.9 -0.2 32 16-47 162-194 (241)
122 cd04502 SGNH_hydrolase_like_7 24.5 1.1E+02 0.0024 27.8 4.3 39 151-194 27-65 (171)
123 PRK13805 bifunctional acetalde 24.3 3.8E+02 0.0083 31.9 9.7 75 80-167 480-558 (862)
124 KOG4465 Uncharacterized conser 24.1 58 0.0013 34.9 2.6 52 390-442 522-590 (598)
125 PRK06555 pyrophosphate--fructo 23.8 2.4E+02 0.0052 30.8 7.2 45 146-193 111-156 (403)
126 cd00764 Eukaryotic_PFK Phospho 23.5 2.5E+02 0.0054 33.2 7.8 47 146-193 477-523 (762)
127 cd08196 DHQS-like1 Dehydroquin 22.9 5.2E+02 0.011 27.4 9.5 91 81-186 20-110 (346)
128 PRK10586 putative oxidoreducta 20.6 4.7E+02 0.01 27.8 8.7 39 146-191 85-123 (362)
129 COG0371 GldA Glycerol dehydrog 20.5 4.2E+02 0.0091 28.5 8.1 44 146-196 83-126 (360)
No 1
>KOG1169 consensus Diacylglycerol kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-72 Score=607.29 Aligned_cols=398 Identities=37% Similarity=0.624 Sum_probs=320.2
Q ss_pred EEeeccccccccchhhhhhHhhhhh-hhccCCCCCCCCC-Ccccc---ccCCCCCCCCCeEEEEEcCCCCCCChhhHHHH
Q 010507 28 MRIDKEDLRRKLSIPEYLRVAMSNA-IRRKEGEPPADTC-QSDVI---VDGNGVQPPEAPMVVFINSRSGGRHGPELKER 102 (508)
Q Consensus 28 ~~~~~~~lr~~~~~p~yl~~~~~~~-~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~lviiNp~sg~~~~~~~~~~ 102 (508)
-+||.+.+++++..|.++.+..+.. +.+.......... ..... .......++..|++|||||+||+++|+.+.++
T Consensus 214 ~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PLlVfvNpKSGg~~G~~ll~~ 293 (634)
T KOG1169|consen 214 QECDLGELKDHILPPSTLRPARTARVASDHSGLPGEKSEEVTDAKKMQQLLVTDPPDWRPLLVFVNPKSGGQQGERLLRR 293 (634)
T ss_pred hhccChhhhhccCCceeeecccccccccccccccccccccccccccccccccCCCCCCcceEEEEecCCcccccHHHHHH
Confidence 4899999999999999999886662 1111100000000 00000 01134556788999999999999999999999
Q ss_pred HHHHhcccCeEEEeecc-ccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcE
Q 010507 103 LQELMGKEQVFDLSEVK-PHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPV 181 (508)
Q Consensus 103 l~~~l~~~~v~~l~~~~-~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl 181 (508)
++.+|++.|+|||.... |.. +..+.++ ....+|+||||||||+|||+.+.++...+..+.|||
T Consensus 294 f~~lLnp~QVfdl~~~~~p~~--------gL~l~~~--------~~~~riLVcGGDGTvGWVL~~i~~~n~~~~~~~PpV 357 (634)
T KOG1169|consen 294 FRYLLNPVQVFDLLKRGGPRP--------GLTLFRD--------VPDFRILVCGGDGTVGWVLGCIDKLNKQNAIPPPPV 357 (634)
T ss_pred HHHhcChhhEEecccCCCCch--------hHHHHHh--------CCcceEEEecCCCcchhhhhhHHHhhccccCCCCCe
Confidence 99999999999998764 432 2334332 234599999999999999999999765545579999
Q ss_pred EEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCccchHHHHHHHHHHhhcCCeeeeecceeEe
Q 010507 182 AIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 261 (508)
Q Consensus 182 ~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~~~av~~il~~i~~g~~~~iD~w~v~v 261 (508)
||+||||||||||+|+| |++||+++.. +.++|+.+..+.+.++|+|+|.+
T Consensus 358 AilPLGTGNDLsR~l~W-----------------------------Ggg~~g~~~~-~~~iL~~i~~a~v~~lDrW~v~v 407 (634)
T KOG1169|consen 358 AILPLGTGNDLSRVLRW-----------------------------GGGYPGEDRN-LIKILKDIEEAPVTKLDRWKVLV 407 (634)
T ss_pred EEEecCCCCchHhhcCC-----------------------------CCCCCcchhh-HHHHHHhhhhccceecceeeEEe
Confidence 99999999999999999 9999999877 99999999999999999999999
Q ss_pred ecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccceEEeEEeeeehHHHhhhhhhccccCCCccccCCCcchhh
Q 010507 262 QMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIY 341 (508)
Q Consensus 262 ~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~F~Ny~sIG~DA~Va~~f~~~R~~~p~l~~~rl~nkl~Y 341 (508)
++++.+.+ +++.++.+ .+ ...+..+|+||||||+||+|+++||++|+++|++|++|++||++|
T Consensus 408 ~~~~~~~~--~~~~~~~~-----~~----------~~~~~~imnNYFSIGvDA~Ia~~FH~~Re~~PekF~Sr~~NKl~Y 470 (634)
T KOG1169|consen 408 EPQSGELV--QYSLKPPE-----KG----------DPVPYGIMNNYFSIGVDAQIAYGFHNMREKNPEKFNSRMKNKLWY 470 (634)
T ss_pred eccccccc--cccccCCC-----cC----------CCCCeeeEeeeeeecccHHHHHHHHHHhhhChHhhcchhhceeee
Confidence 88776544 45544331 11 112357999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEecCCCCCccccccCCCCchhhcccCCc
Q 010507 342 SGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFV 421 (508)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N~~~ygGG~~~wg~~~~~~~~~~g~~ 421 (508)
+.+|+++ +|++.|+. ++..+++.+ +.+|+.+++|.++++|+++|++||+||.++||+.++++.+.+++.
T Consensus 471 f~~G~q~-~f~~~ck~------~~~~i~i~~----~~d~~dl~~p~sleGIv~LNIpS~ggG~nlWg~~~~~~~~~~~~~ 539 (634)
T KOG1169|consen 471 FEFGTQE-TFAARCKN------LHLHIKIEL----DGDGEDLELPKSLEGIVVLNIPSWGGGSNLWGNSNKSKGNFRGFS 539 (634)
T ss_pred eeecchh-hHHHhhcC------CccceEEEE----cccceEccCCCCceeEEEEcccccccCcccccccCcccccccccc
Confidence 9999854 57777753 222333333 346889999989999999999999999999999999998889999
Q ss_pred ccCCCCCcEEEEEeCChhHHHHHHHhhhCCeEEEee---e-eEEEEecCCCcccceEEecCcccCCCCCCCCCeEEEEEE
Q 010507 422 EAHADDGLLEIFGLKQGWHASFVMVELISAKHIAQA---A-AIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKR 497 (508)
Q Consensus 422 ~a~~dDGlLEVv~l~~~~~~~~l~~~l~~g~~l~qa---~-~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~veI~~ 497 (508)
+++.|||++|+|++++.||.++++.+|.+++|++|. . .++|. +++..|||||||||+|||+ .|+|++
T Consensus 540 ~~d~~dgliEvvgv~~~~h~~~~qvgL~~a~rigQ~~a~~~~~~i~----~~k~~PMQiDGEPW~Q~p~-----tI~Ith 610 (634)
T KOG1169|consen 540 EADDDDGLIEVVGVQDSWHLLQEQVGLESALRIGQRLAQCSERVIG----TKKTFPMQIDGEPWMQPPC-----TIEITH 610 (634)
T ss_pred ccCCCcCeEEEEEeccchhhhhhhhccchhhHHHHHhhccEEEEec----cccCcceecCCccccCCCc-----eEEEEe
Confidence 999999999999999999999999999999999862 2 33355 4599999999999999985 499999
Q ss_pred EecccccccCC
Q 010507 498 VPFQSLMISGE 508 (508)
Q Consensus 498 ~p~~~~~~~~~ 508 (508)
.+++.+|++++
T Consensus 611 k~q~~mL~~~~ 621 (634)
T KOG1169|consen 611 KNQAPMLMKAA 621 (634)
T ss_pred cchHhhhhccc
Confidence 99999998763
No 2
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-60 Score=495.76 Aligned_cols=375 Identities=30% Similarity=0.535 Sum_probs=290.5
Q ss_pred EeeccccccccchhhhhhHhhhhh-------------hhccCCCCCCCCCCccccccCCCCCCCCCeEEEEEcCCCCCCC
Q 010507 29 RIDKEDLRRKLSIPEYLRVAMSNA-------------IRRKEGEPPADTCQSDVIVDGNGVQPPEAPMVVFINSRSGGRH 95 (508)
Q Consensus 29 ~~~~~~lr~~~~~p~yl~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lviiNp~sg~~~ 95 (508)
.|.+|.+..+|++|+||+...+-. .++|..+.+......+.++.+..+.++|+|++|||||+|||++
T Consensus 301 pCslGahaavivPPTWIlr~~~pqnslkaskkkkRtsfkRKasKkg~ee~k~rpFvikPtsSplmkPLLVFVNPKSGGNq 380 (1004)
T KOG0782|consen 301 PCSLGAHAAVIVPPTWILRLANPQNSLKASKKKKRTSFKRKASKKGHEENKGRPFVIKPTSSPLMKPLLVFVNPKSGGNQ 380 (1004)
T ss_pred cccccccceeecCchHheeecCccchhhhhhhcccCchhhhhhhccchhccCCceEEccCCCCCCCceEEEecCCCCCcc
Confidence 799999999999999998754331 1222222222223345566678888999999999999999999
Q ss_pred hhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhHHHHHHHHhhcccCCC
Q 010507 96 GPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGR 175 (508)
Q Consensus 96 ~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~ 175 (508)
|.+.+..+..+|+++|+|||+... +..+-++-+. ....+|++|||||||+|||+.|.++..
T Consensus 381 GsK~lq~f~WyLNPRQVFDlsq~G--------PK~aLEmyRK--------V~nLRILaCGGDGTVGWiLStLD~L~l--- 441 (1004)
T KOG0782|consen 381 GSKALQTFCWYLNPRQVFDLSQLG--------PKFALEMYRK--------VVNLRILACGGDGTVGWILSTLDNLNL--- 441 (1004)
T ss_pred hHHHHHHHHHhcChhhheehhccC--------cHHHHHHHHh--------ccceEEEEecCCCceeehhhhhhhcCC---
Confidence 999999999999999999998654 4445555543 245899999999999999999998753
Q ss_pred CCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCccchHHHHHHHHHHhhcCCeeeee
Q 010507 176 EPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFAWKSAVKRTLQRASAGPICRLD 255 (508)
Q Consensus 176 ~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~~~av~~il~~i~~g~~~~iD 255 (508)
.+.||+||+||||||||||+|+| ||+|..+ ++.+|++.++.|.++.+|
T Consensus 442 ~p~PPvailPLGTGNDLARtlnW-----------------------------GGgytDE---PvSkil~~ve~gtvVqLD 489 (1004)
T KOG0782|consen 442 PPYPPVAILPLGTGNDLARTLNW-----------------------------GGGYTDE---PVSKILQAVEHGTVVQLD 489 (1004)
T ss_pred CCCCCeeEeecCCcchHHHhccc-----------------------------CCCcCcc---hHHHHHHHHhcCcEEeee
Confidence 57899999999999999999999 9999876 688999999999999999
Q ss_pred cceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccceEEeEEeeeehHHHhhhhhhccccCCCccccCC
Q 010507 256 SWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPI 335 (508)
Q Consensus 256 ~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~F~Ny~sIG~DA~Va~~f~~~R~~~p~l~~~rl 335 (508)
+|++.++ |+++. .+-| .|.|. .+.+|- .+|.||||+||||.|..+||++|+.+|++|++|+
T Consensus 490 RW~lhvE-pNp~~-------~pEe---~ddG~--~~~LPL------~VfnNYFSlGfDAHVtLeFHeSReANPekfNSRf 550 (1004)
T KOG0782|consen 490 RWRLHVE-PNPSC-------NPEE---EDDGM--QSALPL------TVFNNYFSLGFDAHVTLEFHESREANPEKFNSRF 550 (1004)
T ss_pred eeeeccc-CCCCC-------Chhh---hcccc--hhccch------hHhhccccccccceEEEEeccccccCHHHHHHHH
Confidence 9999994 43311 1111 23443 234553 5899999999999999999999999999999999
Q ss_pred CcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEecCCCCCccccccCCCCchhh
Q 010507 336 SNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYL 415 (508)
Q Consensus 336 ~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N~~~ygGG~~~wg~~~~~~~ 415 (508)
+||+.|+..++..++.. +.+.+-+.+++.+++++.- -.++ .-++..||++|+++|.+|++|||++.+.
T Consensus 551 rNkmfYaG~afsDfl~r-------SskDL~khi~vvCDG~DlT--PkIq-eLK~qCivFlNIprYcaGTmPWG~pgdh-- 618 (1004)
T KOG0782|consen 551 RNKMFYAGLAFSDFLKR-------SSKDLCKHITVVCDGVDLT--PKIQ-ELKLQCIVFLNIPRYCAGTMPWGEPGDH-- 618 (1004)
T ss_pred hhhhhhcchhHHHHHhh-------hhHHhhhheEEEecCccCC--hhhh-hcccceEEEecchhhhcCccCCCCCCcc--
Confidence 99999999999886432 2344556677666543221 1111 1246899999999999999999998654
Q ss_pred cccCCcccCCCCCcEEEEEeCChhHHHHHHHhh-hCCeEEEeeeeEEEEecCCCcccceEEecCcccCCCCCCCCCeEEE
Q 010507 416 EKKGFVEAHADDGLLEIFGLKQGWHASFVMVEL-ISAKHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVE 494 (508)
Q Consensus 416 ~~~g~~~a~~dDGlLEVv~l~~~~~~~~l~~~l-~~g~~l~qa~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~ve 494 (508)
..|.++..|||.+||++|.-..- . .+.+ .+|.+++||+++++.+. +.+|||+||||+...| ..|.
T Consensus 619 --hDfePqrhdDGyvEViGFTmasL-A--ALQvGGhGERl~QCreV~l~T~----KaIPmQVDGEPC~LAp-----s~Ir 684 (1004)
T KOG0782|consen 619 --HDFEPQRHDDGYVEVIGFTMASL-A--ALQVGGHGERLAQCREVRLITN----KAIPMQVDGEPCLLAP-----SIIR 684 (1004)
T ss_pred --ccCCccccCCceEEEEeeeHHHH-H--HHhhcCcchhhhhceeEEEEec----cccceeecCcchhcch-----hheE
Confidence 34678889999999999984211 1 1122 37899999999999987 9999999999997665 3466
Q ss_pred EEEEe
Q 010507 495 IKRVP 499 (508)
Q Consensus 495 I~~~p 499 (508)
|....
T Consensus 685 i~lrn 689 (1004)
T KOG0782|consen 685 IGLRN 689 (1004)
T ss_pred Eeecc
Confidence 65443
No 3
>PRK12361 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-43 Score=387.57 Aligned_cols=349 Identities=21% Similarity=0.215 Sum_probs=259.1
Q ss_pred hheehhhhcCcce-EEeeccccccccchhhhhhHhh-----hhh---hhccCCCCCCCCCCccccc--cCCCCCCCCCeE
Q 010507 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVAM-----SNA---IRRKEGEPPADTCQSDVIV--DGNGVQPPEAPM 83 (508)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~~-----~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 83 (508)
..|+..+..|.+| |||..|..||..++.+||.... .++ |+++|+.+.+|..|.+.++ .+......++++
T Consensus 166 ~~i~~~~~~~~~VlVHC~~G~sRSa~vv~ayLm~~~~~~~~~eA~~~vr~~Rp~v~~n~~q~~~l~~~~~~~~~~~~~~~ 245 (547)
T PRK12361 166 NWIHRQVRANKSVVVHCALGRGRSVLVLAAYLLCKDPDLTVEEVLQQIKQIRKTARLNKRQLRALEKMLEQGKLNIHKRA 245 (547)
T ss_pred HHHHHHHHCCCeEEEECCCCCCcHHHHHHHHHHHhccCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHcCCcccCCce
Confidence 4567778888889 8999999999999999998542 122 6888999999988877766 355666678899
Q ss_pred EEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhHHHH
Q 010507 84 VVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWV 163 (508)
Q Consensus 84 lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv~~v 163 (508)
++|+||.||++++.+.++++++.|.+. +++. .+.|+..++++++++++. .++.+.|||+|||||||+|
T Consensus 246 ~iI~NP~SG~g~~~~~~~~i~~~L~~~--~~~~-----v~~t~~~~~a~~la~~~~-----~~~~d~Viv~GGDGTl~ev 313 (547)
T PRK12361 246 WLIANPVSGGGKWQEYGEQIQRELKAY--FDLT-----VKLTTPEISAEALAKQAR-----KAGADIVIACGGDGTVTEV 313 (547)
T ss_pred EEEECCCCCCCcHHHHHHHHHHHHhcC--CceE-----EEECCCCccHHHHHHHHH-----hcCCCEEEEECCCcHHHHH
Confidence 999999999999999999999999874 3332 246777889999998753 2467899999999999999
Q ss_pred HHHHhhcccCCCCCCCcEEEeeCCCCcchhhhh-CCccceeeeeeehhhhhhhccccccccccccCCCCccchHHHHHHH
Q 010507 164 LGSVGELNKQGREPVPPVAIIPLGTGNDLSRSF-GWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFAWKSAVKRT 242 (508)
Q Consensus 164 l~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~~~av~~i 242 (508)
++++.+ .++||||||+||||||||+| |+ +.+. .++.++++
T Consensus 314 ~~~l~~-------~~~~lgiiP~GTgNdfAr~L~gi-----------------------------~~~~-~~~~~a~~-- 354 (547)
T PRK12361 314 ASELVN-------TDITLGIIPLGTANALSHALFGL-----------------------------GSKL-IPVEQACD-- 354 (547)
T ss_pred HHHHhc-------CCCCEEEecCCchhHHHHHhcCC-----------------------------CCCC-ccHHHHHH--
Confidence 999976 46899999999999999999 99 2110 24455555
Q ss_pred HHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccceEEeEEeeeehHHHhhhhhh
Q 010507 243 LQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHH 322 (508)
Q Consensus 243 l~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~F~Ny~sIG~DA~Va~~f~~ 322 (508)
.+.+|+++++|+.. + ++++|+|++|+||||+|++..++
T Consensus 355 --~i~~g~~~~iD~g~----------------------------------v------n~~~fln~agiG~da~v~~~~~~ 392 (547)
T PRK12361 355 --NIIQGHTQRIDTAR----------------------------------C------NDRLMLLLVGIGFEQKMIESADR 392 (547)
T ss_pred --HHHhCCCeEEEEEE----------------------------------E------cCeEEEEEEeechhHHHHHhccH
Confidence 45568888888421 2 24799999999999999999887
Q ss_pred ccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEecCCCCCc
Q 010507 323 LRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYAS 402 (508)
Q Consensus 323 ~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N~~~ygG 402 (508)
.++ .++ |+++|...+++.++.++++ .++++++ +.+.... +..+++++|+++|++
T Consensus 393 ~~k-------~~~-G~laY~~~~~~~l~~~~~~-----------~l~i~~d-----g~~~~~~--~~~~l~v~N~~~~~~ 446 (547)
T PRK12361 393 ERK-------NAL-GQLAYLDGLWRAVNENETL-----------TLTVTLD-----DAEPQTI--STHSLVVANAAPFTS 446 (547)
T ss_pred HHH-------hcc-CHHHHHHHHHHHhhcCCCe-----------eEEEEEC-----CCCceEE--EEEEEEEEcCCCccc
Confidence 664 234 9999999999887654431 2444432 2222222 356788999977643
Q ss_pred cccccCCCCchhhcccCCcccCCCCCcEEEEEeCCh----hHHHHHHH----hhh-----CCeEEEeeeeEEEEecCCCc
Q 010507 403 GRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQG----WHASFVMV----ELI-----SAKHIAQAAAIRLEFRGGEW 469 (508)
Q Consensus 403 G~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~~----~~~~~l~~----~l~-----~g~~l~qa~~i~I~~~~~~~ 469 (508)
... .|.+.+++|||+|||++++.. +++..++. +.. ...++.++++++|+++
T Consensus 447 ~~~------------~Ggg~~~~~DG~Ldv~~v~~~~~~~~~l~~l~~~~~~g~~~~~~~~~v~~~~~k~v~I~~~---- 510 (547)
T PRK12361 447 LLA------------QGGGEPNMTDGLLDITWLDSGGEPGEQLLSLAELALSGLGKEPEANKVHHAHAKKVTISSQ---- 510 (547)
T ss_pred ccc------------cCCCCCCCCCceeEEEEEcCCCcchHHHHHHHHHHHHHhcccCCCCceEEEEeeEEEEEeC----
Confidence 211 011345799999999999762 34443322 211 2346679999999986
Q ss_pred ccceEEecCcccCCCCCCCCCeEEEEEEEecccccc
Q 010507 470 KDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMI 505 (508)
Q Consensus 470 ~~~~~qiDGE~~~~~~~~~~~~~veI~~~p~~~~~~ 505 (508)
+++++|+|||+.. .++++|+..|.+.-++
T Consensus 511 ~~~~~~iDGE~~~-------~~p~~i~v~p~al~vl 539 (547)
T PRK12361 511 KPIKYVIDGELFE-------DEDLTIEVQPASLKVF 539 (547)
T ss_pred CceEEEECCccCC-------ceEEEEEEecCceEEE
Confidence 7899999999985 3469999999876554
No 4
>PRK13057 putative lipid kinase; Reviewed
Probab=100.00 E-value=3.8e-42 Score=347.69 Aligned_cols=273 Identities=21% Similarity=0.269 Sum_probs=211.0
Q ss_pred EEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhHHHH
Q 010507 84 VVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWV 163 (508)
Q Consensus 84 lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv~~v 163 (508)
++|+||.||+++ ..++++++.|.... +++. .+.|+..++++++++++ ..+.++|||+|||||||+|
T Consensus 1 ~~I~Np~sg~~~--~~~~~i~~~l~~~g-~~~~-----~~~t~~~~~a~~~~~~~------~~~~d~iiv~GGDGTv~~v 66 (287)
T PRK13057 1 LLLVNRHARSGR--AALAAARAALEAAG-LELV-----EPPAEDPDDLSEVIEAY------ADGVDLVIVGGGDGTLNAA 66 (287)
T ss_pred CEEECCCCCCcc--hhHHHHHHHHHHcC-CeEE-----EEecCCHHHHHHHHHHH------HcCCCEEEEECchHHHHHH
Confidence 479999999866 46788888887654 3332 24567889999998763 2467899999999999999
Q ss_pred HHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCccchHHHHHHHH
Q 010507 164 LGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFAWKSAVKRTL 243 (508)
Q Consensus 164 l~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~~~av~~il 243 (508)
+|++.+ ..+|||+||+||||||||+||+ |.++.++++.
T Consensus 67 ~~~l~~-------~~~~lgiiP~GT~Ndfar~Lg~---------------------------------~~~~~~a~~~-- 104 (287)
T PRK13057 67 APALVE-------TGLPLGILPLGTANDLARTLGI---------------------------------PLDLEAAARV-- 104 (287)
T ss_pred HHHHhc-------CCCcEEEECCCCccHHHHHcCC---------------------------------CCCHHHHHHH--
Confidence 999975 4689999999999999999999 7776666554
Q ss_pred HHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccceEEeEEeeeehHHHhhhhhhc
Q 010507 244 QRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHL 323 (508)
Q Consensus 244 ~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~F~Ny~sIG~DA~Va~~f~~~ 323 (508)
+..++++++|+.+ ++ ++||+|++|+||||+|+++++..
T Consensus 105 --i~~~~~~~vD~g~----------------------------------~~------~~~f~n~~g~G~da~v~~~~~~~ 142 (287)
T PRK13057 105 --IATGQVRRIDLGW----------------------------------VN------GHYFFNVASLGLSAELARRLTKE 142 (287)
T ss_pred --HHcCCeEEeeEEE----------------------------------EC------CEEEEEEEecCccHHHHHHhhHH
Confidence 4568888888432 11 47999999999999999998765
Q ss_pred cccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEecCCCCCcc
Q 010507 324 RNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASG 403 (508)
Q Consensus 324 R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N~~~ygGG 403 (508)
++ .++ |+++|+..+++.++.+.+ +++++. .+ ++.... +...++++|.++|+||
T Consensus 143 ~k-------~~~-G~~aY~~~~~~~l~~~~~-------------~~~~l~---~d-~~~~~~--~~~~~~v~N~~~~gg~ 195 (287)
T PRK13057 143 LK-------RRW-GTLGYAIAALRVLRRSRP-------------FTAEIE---HD-GRTERV--KTLQVAVGNGRYYGGG 195 (287)
T ss_pred hh-------ccC-ChhHHHHHHHHHHhhCCC-------------eEEEEE---EC-CEEEEE--EEEEEEEecCcccCCC
Confidence 53 234 999999999998765443 333332 12 344433 3556789999999999
Q ss_pred ccccCCCCchhhcccCCcccCCCCCcEEEEEeCC--hhHHHHHHHhhhCC-------eEEEeeeeEEEEecCCCcccceE
Q 010507 404 RNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQ--GWHASFVMVELISA-------KHIAQAAAIRLEFRGGEWKDAFM 474 (508)
Q Consensus 404 ~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~--~~~~~~l~~~l~~g-------~~l~qa~~i~I~~~~~~~~~~~~ 474 (508)
+.++ |.++++||+|||++++. .+.++.++..++.| .+..++++++|+++ +++++
T Consensus 196 ~~~~-------------p~a~~~DG~ldv~~v~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~~~i~~~----~~~~~ 258 (287)
T PRK13057 196 MTVA-------------HDATIDDGRLDLYSLEVAHWWRLLALLPALRRGRHGEWPDVRAFRTTELELRTR----KPRPI 258 (287)
T ss_pred cccC-------------CCCCCCCceEEEEEecCCCHHHHHHHHHHHhcCCccCCCcEEEEEeeEEEEEeC----CCcEE
Confidence 8775 89999999999999986 56777666666555 34568999999986 78999
Q ss_pred EecCcccCCCCCCCCCeEEEEEEEecccccc
Q 010507 475 QMDGEPWKQPLNRDYSTFVEIKRVPFQSLMI 505 (508)
Q Consensus 475 qiDGE~~~~~~~~~~~~~veI~~~p~~~~~~ 505 (508)
|+|||.+... +++|+.+|.+.-++
T Consensus 259 ~~DGE~~~~~-------p~~i~v~p~al~v~ 282 (287)
T PRK13057 259 NTDGELTTYT-------PAHFRVLPKALRVL 282 (287)
T ss_pred eeCCccCCCC-------CEEEEEECCeEEEE
Confidence 9999998532 48999999877655
No 5
>PRK11914 diacylglycerol kinase; Reviewed
Probab=100.00 E-value=6.4e-42 Score=348.79 Aligned_cols=285 Identities=22% Similarity=0.223 Sum_probs=218.1
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 79 ~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
.|+++++|+||.||++++.+.++++.+.|.+.. +++. .+.|+..++++++++++. ..+.+.||++||||
T Consensus 7 ~~~~~~iI~NP~sG~g~~~~~~~~~~~~l~~~g-~~~~-----~~~t~~~~~~~~~a~~~~-----~~~~d~vvv~GGDG 75 (306)
T PRK11914 7 EIGKVTVLTNPLSGHGAAPHAAERAIARLHHRG-VDVV-----EIVGTDAHDARHLVAAAL-----AKGTDALVVVGGDG 75 (306)
T ss_pred CCceEEEEECCCCCCCcHHHHHHHHHHHHHHcC-CeEE-----EEEeCCHHHHHHHHHHHH-----hcCCCEEEEECCch
Confidence 468999999999999998888988888887654 3332 246777899999998753 25678999999999
Q ss_pred hHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCcc-chHH
Q 010507 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPF-AWKS 237 (508)
Q Consensus 159 Tv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~-~~~~ 237 (508)
|||+|++++.. .++|||+||+||||||||+||+ |. ++.+
T Consensus 76 Ti~evv~~l~~-------~~~~lgiiP~GT~NdfAr~lg~---------------------------------~~~~~~~ 115 (306)
T PRK11914 76 VISNALQVLAG-------TDIPLGIIPAGTGNDHAREFGI---------------------------------PTGDPEA 115 (306)
T ss_pred HHHHHhHHhcc-------CCCcEEEEeCCCcchhHHHcCC---------------------------------CCCCHHH
Confidence 99999999975 5689999999999999999999 64 4555
Q ss_pred HHHHHHHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccceEEeEEeeeehHHHh
Q 010507 238 AVKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVA 317 (508)
Q Consensus 238 av~~il~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~F~Ny~sIG~DA~Va 317 (508)
+++ .+.+|+++++|+.+++-. + ...++|+|++|+||||.|+
T Consensus 116 a~~----~i~~g~~~~iDlg~v~~~-------------------------------~----~~~~~f~n~~~~G~~a~v~ 156 (306)
T PRK11914 116 AAD----VIVDGWTETVDLGRIQDD-------------------------------D----GIVKWFGTVAATGFDSLVT 156 (306)
T ss_pred HHH----HHHcCCceEEEEEEEecC-------------------------------C----CCcEEEEEEEeeehHHHHH
Confidence 554 445689999997554320 0 0137999999999999999
Q ss_pred hhhhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEecC
Q 010507 318 YGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNL 397 (508)
Q Consensus 318 ~~f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N~ 397 (508)
+..++.|+ ++ |+++|...+++.++.+++. .++++++ +++.++ .++..++++|.
T Consensus 157 ~~~~~~k~--------~~-G~~aY~~~~l~~l~~~~~~-----------~~~i~~d-----g~~~~~--~~~~~~~v~N~ 209 (306)
T PRK11914 157 DRANRMRW--------PH-GRMRYNLAMLAELSKLRPL-----------PFRLVLD-----GTEEIV--TDLTLAAFGNT 209 (306)
T ss_pred HHHHhccc--------cC-CchhhHHHHHHHHHhcCCC-----------cEEEEEe-----CCeEEE--eeEEEEEEeCc
Confidence 88876542 33 9999999999988654432 2444443 223333 34567789999
Q ss_pred CCCCccccccCCCCchhhcccCCcccCCCCCcEEEEEeCC--hhHHHHHHHhhhCCe-------EEEeeeeEEEEecCCC
Q 010507 398 HNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQ--GWHASFVMVELISAK-------HIAQAAAIRLEFRGGE 468 (508)
Q Consensus 398 ~~ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~--~~~~~~l~~~l~~g~-------~l~qa~~i~I~~~~~~ 468 (508)
++|+||+.++ |+|+++||+|||++++. .+.++.++..++.|+ +..++++++|++.
T Consensus 210 ~~~GG~~~~~-------------p~a~~~DG~ldv~~v~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~i~i~~~--- 273 (306)
T PRK11914 210 RSYGGGMLIC-------------PNADHTDGLLDITMVQSASRTRLLRLFPTVFKGTHVELDEVSTARAKTVHVECP--- 273 (306)
T ss_pred ccccCCceeC-------------CCCcCCCCcEEEEEEecCCHHHHHHHHHHhcCCcccCCCcEEEEEeEEEEEEcC---
Confidence 9999998775 89999999999999976 556666666666664 3458899999864
Q ss_pred cccceEEecCcccCCCCCCCCCeEEEEEEEecccccc
Q 010507 469 WKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMI 505 (508)
Q Consensus 469 ~~~~~~qiDGE~~~~~~~~~~~~~veI~~~p~~~~~~ 505 (508)
++++|+|||+... ++++|+++|.+.-++
T Consensus 274 --~~~~~~DGE~~~~-------~p~~i~v~p~al~v~ 301 (306)
T PRK11914 274 --GINAYADGDFACP-------LPAEISAVPGALQIL 301 (306)
T ss_pred --CcceecCCCcCCC-------CceEEEEEcCeEEEE
Confidence 3789999999752 359999999876554
No 6
>TIGR03702 lip_kinase_YegS lipid kinase YegS. Members of this protein family are designated YegS, an apparent lipid kinase family in the Proteobacteria. Bakali, et al. report phosphatidylglycerol kinase activity for the member from Escherichia coli, but refrain from calling that activity synonymous with its biological role. Note that a broader, subfamily-type model (TIGR00147), includes this family but also multiple paralogs in some species and varied functions.
Probab=100.00 E-value=1e-41 Score=345.74 Aligned_cols=280 Identities=18% Similarity=0.174 Sum_probs=207.3
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhHH
Q 010507 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVG 161 (508)
Q Consensus 82 ~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv~ 161 (508)
++++|+||+||..+ .+.++.+.|.+... +++ .+.|+..+|++++++++. ..+.++|||+|||||||
T Consensus 1 ~~~~I~N~~~~~~~---~~~~~~~~l~~~g~-~~~-----v~~t~~~~~a~~~a~~~~-----~~~~d~vv~~GGDGTi~ 66 (293)
T TIGR03702 1 KALLILNGKQADNE---DVREAVGDLRDEGI-QLH-----VRVTWEKGDAQRYVAEAL-----ALGVSTVIAGGGDGTLR 66 (293)
T ss_pred CEEEEEeCCccchh---HHHHHHHHHHHCCC-eEE-----EEEecCCCCHHHHHHHHH-----HcCCCEEEEEcCChHHH
Confidence 47899999987432 44455666766543 332 246778899999998764 24678999999999999
Q ss_pred HHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCccchHHHHHH
Q 010507 162 WVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFAWKSAVKR 241 (508)
Q Consensus 162 ~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~~~av~~ 241 (508)
+|+|+|.+... ...+|||+||+||||||||+||+ |.++.++++.
T Consensus 67 ev~ngl~~~~~---~~~~~lgiiP~GTgNdfAr~l~i---------------------------------p~~~~~a~~~ 110 (293)
T TIGR03702 67 EVATALAQIRD---DAAPALGLLPLGTANDFATAAGI---------------------------------PLEPAKALKL 110 (293)
T ss_pred HHHHHHHhhCC---CCCCcEEEEcCCchhHHHHhcCC---------------------------------CCCHHHHHHH
Confidence 99999986421 23579999999999999999999 7776666555
Q ss_pred HHHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccceEEeEEeeeehHHHhhhhh
Q 010507 242 TLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFH 321 (508)
Q Consensus 242 il~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~F~Ny~sIG~DA~Va~~f~ 321 (508)
+ .+|+.+++|+.. ++. .+||+|.+|+||||+|+++.+
T Consensus 111 i----~~g~~~~iDlg~----------------------------------v~~-----~~~f~n~~~~G~da~v~~~~~ 147 (293)
T TIGR03702 111 A----LNGAAQPIDLAR----------------------------------VNG-----KHYFLNMATGGFGTRVTTETS 147 (293)
T ss_pred H----HhCCceeeeEEE----------------------------------ECC-----ccEEEEEeecccchHhhhhhh
Confidence 4 458888888422 110 269999999999999999987
Q ss_pred hccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEecCCCCC
Q 010507 322 HLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYA 401 (508)
Q Consensus 322 ~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N~~~yg 401 (508)
+..+ .+ .|+++|...+++.++.+++ ++++++ .+ .+.+ ..+...++++|.++||
T Consensus 148 ~~~k-------~~-~G~~aY~~~~l~~l~~~~~-------------~~~~i~---~~-~~~~--~~~~~~~~v~N~~~~G 200 (293)
T TIGR03702 148 EKLK-------KA-LGGAAYLITGLTRFSELTA-------------ASCEFR---GP-DFHW--EGDFLALGIGNGRQAG 200 (293)
T ss_pred HHHH-------hc-cchHHHHHHHHHHHhhCCC-------------eEEEEE---EC-CEEE--EeeEEEEEEECCCcCC
Confidence 7542 23 4999999999988754432 444443 12 2222 2235677899999999
Q ss_pred ccccccCCCCchhhcccCCcccCCCCCcEEEEEeCChhHHHHHHHhhhCCe---E--EEeeeeEEEEecCCCcccceEEe
Q 010507 402 SGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQGWHASFVMVELISAK---H--IAQAAAIRLEFRGGEWKDAFMQM 476 (508)
Q Consensus 402 GG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~~~~~~~l~~~l~~g~---~--l~qa~~i~I~~~~~~~~~~~~qi 476 (508)
||+.+. |+|+++||+|||++++..+.+..++..+++|. + ..++++++|+++ +++++|+
T Consensus 201 Gg~~i~-------------P~A~~~DG~Ldv~~v~~~~~~~~~l~~~~~g~~~~~~~~~~~~~i~i~~~----~~~~~~v 263 (293)
T TIGR03702 201 GGQVLC-------------PDALINDGLLDVRILPAPELLPATLSTLFGGDKNPEFVRARLPWLEIEAP----QPLTFNL 263 (293)
T ss_pred CCceeC-------------CCCccCCceEEEEEeCCHHHHHHHHHHHhcCCCCCcEEEEEcCEEEEEeC----CCcEEEE
Confidence 998775 89999999999999988555555555565553 2 235678999876 7899999
Q ss_pred cCcccCCCCCCCCCeEEEEEEEecccccc
Q 010507 477 DGEPWKQPLNRDYSTFVEIKRVPFQSLMI 505 (508)
Q Consensus 477 DGE~~~~~~~~~~~~~veI~~~p~~~~~~ 505 (508)
|||+... ++++|+++|.+.-++
T Consensus 264 DGE~~~~-------~p~~i~v~p~al~v~ 285 (293)
T TIGR03702 264 DGEPLSG-------RHFRIEVLPGALRCH 285 (293)
T ss_pred CCCcCCC-------ceEEEEEEcCeEEEE
Confidence 9999852 459999999887655
No 7
>PRK13059 putative lipid kinase; Reviewed
Probab=100.00 E-value=2.2e-41 Score=343.96 Aligned_cols=281 Identities=19% Similarity=0.174 Sum_probs=207.6
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
|+++++|+||.||++++.+.++++++.|.+.. +++... .|+...+. ++++++. .++.+.||++|||||
T Consensus 1 ~~~~~~I~NP~aG~g~~~~~~~~i~~~l~~~g-~~~~~~-----~~~~~~~~-~~~~~~~-----~~~~d~vi~~GGDGT 68 (295)
T PRK13059 1 MKKVKFIYNPYSGENAIISELDKVIRIHQEKG-YLVVPY-----RISLEYDL-KNAFKDI-----DESYKYILIAGGDGT 68 (295)
T ss_pred CcEEEEEECCcccchhHHHHHHHHHHHHHHCC-cEEEEE-----EccCcchH-HHHHHHh-----hcCCCEEEEECCccH
Confidence 46899999999999988788888888887654 343321 12222232 3344332 246789999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCccchHHHH
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFAWKSAV 239 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~~~av 239 (508)
||+|+|+|.+. ...+|||+||+||||||||+||+ |.++.+++
T Consensus 69 v~evv~gl~~~-----~~~~~lgviP~GTgNdfAr~lgi---------------------------------~~~~~~a~ 110 (295)
T PRK13059 69 VDNVVNAMKKL-----NIDLPIGILPVGTANDFAKFLGM---------------------------------PTDIGEAC 110 (295)
T ss_pred HHHHHHHHHhc-----CCCCcEEEECCCCHhHHHHHhCC---------------------------------CCCHHHHH
Confidence 99999999864 25789999999999999999999 77777776
Q ss_pred HHHHHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccceEEeEEeeeehHHHhhh
Q 010507 240 KRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYG 319 (508)
Q Consensus 240 ~~il~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~F~Ny~sIG~DA~Va~~ 319 (508)
+.+ ..|+.+++|+.+ ++ ++||+|++|+||||+|++.
T Consensus 111 ~~i----~~g~~~~vDlg~----------------------------------v~------~~~f~n~~~~G~~a~v~~~ 146 (295)
T PRK13059 111 EQI----LKSKPKKVDLGK----------------------------------IN------DKYFINVASTGLFTDVSQK 146 (295)
T ss_pred HHH----HhCCcEEeeEEE----------------------------------EC------CEEEEEEEeeeechhhhhh
Confidence 654 458888888532 11 4799999999999999999
Q ss_pred hhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEecCCC
Q 010507 320 FHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHN 399 (508)
Q Consensus 320 f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N~~~ 399 (508)
++...+ .++ |+++|...++++++.+++ ++++++ .+ ++.+. .+...++++|.++
T Consensus 147 ~~~~~k-------~~~-G~~aY~~~~~~~l~~~~~-------------~~~~i~---~d-~~~~~--~~~~~~~v~N~~~ 199 (295)
T PRK13059 147 TDVNLK-------NTI-GKLAYYLKGLEELPNFRK-------------LKVKVT---SE-EVNFD--GDMYLMLVFNGQT 199 (295)
T ss_pred ccHHHh-------hCc-chHHHHHHHHHHHhcCCC-------------eeEEEE---EC-CEEEE--eeEEEEEEEcCcc
Confidence 875432 234 999999999998765443 333332 12 34443 2356778999987
Q ss_pred CCccccccCCCCchhhcccCCcccCCCCCcEEEEEeCC--hhHHHHHHHhhhCC--------eEEEeeeeEEEEecCCCc
Q 010507 400 YASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQ--GWHASFVMVELISA--------KHIAQAAAIRLEFRGGEW 469 (508)
Q Consensus 400 ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~--~~~~~~l~~~l~~g--------~~l~qa~~i~I~~~~~~~ 469 (508)
|+ |+.++ |+|+++||+|||+++++ .|.++.++..++.| .+..++++++|+++
T Consensus 200 ~G-g~~~~-------------p~a~~~DG~Ldv~i~~~~~~~~~l~~~~~~~~G~~~~~~~~v~~~~~~~i~i~~~---- 261 (295)
T PRK13059 200 AG-NFNLA-------------YKAEVDDGLLDVIIIKACPIIDLIPLFIKVLKGEHLEDVNGLIYFKTDKLEIESN---- 261 (295)
T ss_pred cc-CcccC-------------CcccCCCCeEEEEEEcCCCHHHHHHHHHHHHcCCccCCCccEEEEEeeEEEEEeC----
Confidence 65 55554 89999999999999987 56666666666544 34557889999976
Q ss_pred ccceEEecCcccCCCCCCCCCeEEEEEEEeccccccc
Q 010507 470 KDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMIS 506 (508)
Q Consensus 470 ~~~~~qiDGE~~~~~~~~~~~~~veI~~~p~~~~~~~ 506 (508)
+++++|+|||+... ++++|+++|.+.-++.
T Consensus 262 ~~~~~~~DGE~~~~-------~p~~i~v~p~al~v~~ 291 (295)
T PRK13059 262 EEIVTDIDGERGPD-------FPLNIECIKGGLKVLG 291 (295)
T ss_pred CCceEEeCCCcCCC-------CcEEEEEecCeeEEEe
Confidence 78999999999753 3499999998876553
No 8
>PRK13337 putative lipid kinase; Reviewed
Probab=100.00 E-value=1.7e-41 Score=345.70 Aligned_cols=282 Identities=17% Similarity=0.140 Sum_probs=215.9
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
|+++++|+||.||++++.+.+.++...|.+... ++. .+.|+..+|++++++++. .++.+.||++|||||
T Consensus 1 ~~r~~~I~Np~aG~~~~~~~~~~~~~~l~~~~~-~~~-----~~~t~~~~~a~~~a~~~~-----~~~~d~vvv~GGDGT 69 (304)
T PRK13337 1 MKRARIIYNPTSGRELFKKNLPDVLQKLEQAGY-ETS-----AHATTGPGDATLAAERAV-----ERKFDLVIAAGGDGT 69 (304)
T ss_pred CceEEEEECCcccchhHHHHHHHHHHHHHHcCC-EEE-----EEEecCCCCHHHHHHHHH-----hcCCCEEEEEcCCCH
Confidence 568999999999998877778888887876543 322 246778899999988753 246789999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCccchHHHH
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFAWKSAV 239 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~~~av 239 (508)
||+|+|+|.+. ...+|||+||.||||||||+||+ |.++.+++
T Consensus 70 l~~vv~gl~~~-----~~~~~lgiiP~GT~NdfAr~lgi---------------------------------~~~~~~a~ 111 (304)
T PRK13337 70 LNEVVNGIAEK-----ENRPKLGIIPVGTTNDFARALHV---------------------------------PRDIEKAA 111 (304)
T ss_pred HHHHHHHHhhC-----CCCCcEEEECCcCHhHHHHHcCC---------------------------------CCCHHHHH
Confidence 99999999864 24689999999999999999999 77766666
Q ss_pred HHHHHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccceEEeEEeeeehHHHhhh
Q 010507 240 KRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYG 319 (508)
Q Consensus 240 ~~il~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~F~Ny~sIG~DA~Va~~ 319 (508)
+. +..|..+++|+.. ++ +++|+|.+|+|+||+|++.
T Consensus 112 ~~----i~~g~~~~vDlg~----------------------------------vn------~~~fln~~g~G~~a~v~~~ 147 (304)
T PRK13337 112 DV----IIEGHTVPVDIGK----------------------------------AN------NRYFINIAGGGRLTELTYE 147 (304)
T ss_pred HH----HHcCCeEEEEEEE----------------------------------EC------CEEEEeeehhhHHHHHHHh
Confidence 54 4568888888421 22 4799999999999999988
Q ss_pred hhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEecCCC
Q 010507 320 FHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHN 399 (508)
Q Consensus 320 f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N~~~ 399 (508)
.+...+ .++ |+++|...+++.++.+++ +++++. . |++.... +...++++|.++
T Consensus 148 ~~~~~k-------~~~-G~~aY~~~~~~~l~~~~~-------------~~~~i~---~-d~~~~~~--~~~~~~v~n~~~ 200 (304)
T PRK13337 148 VPSKLK-------TML-GQLAYYLKGIEMLPSLKA-------------TDVRIE---Y-DGKLFQG--EIMLFLLGLTNS 200 (304)
T ss_pred cCHHHh-------cCc-ccHHHHHHHHHHHhhCCC-------------ceEEEE---E-CCeEEEe--EEEEEEEEcCcc
Confidence 765432 234 999999999887654432 333332 1 2344332 355778999999
Q ss_pred CCccccccCCCCchhhcccCCcccCCCCCcEEEEEeCC--hhHHHHHHHhhhCCe-------EEEeeeeEEEEecCCCcc
Q 010507 400 YASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQ--GWHASFVMVELISAK-------HIAQAAAIRLEFRGGEWK 470 (508)
Q Consensus 400 ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~--~~~~~~l~~~l~~g~-------~l~qa~~i~I~~~~~~~~ 470 (508)
|+||+.++ |+++++||+|||++++. .+++..++..++.|+ +..++++++|+.+ +
T Consensus 201 ~gg~~~~~-------------p~a~~~DG~ldv~iv~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~~~i~~~----~ 263 (304)
T PRK13337 201 VGGFEKLA-------------PDASLDDGYFDLIIVKKANLAELIHIATLALRGEHIKHPKVIYTKANRIKVSSF----D 263 (304)
T ss_pred cCCccccC-------------CcccCCCCeEEEEEEcCCCHHHHHHHHHHHHcCCcCCCCcEEEEEccEEEEEcC----C
Confidence 99888775 89999999999999976 567776666666554 4468999999976 7
Q ss_pred cceEEecCcccCCCCCCCCCeEEEEEEEecccccc
Q 010507 471 DAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMI 505 (508)
Q Consensus 471 ~~~~qiDGE~~~~~~~~~~~~~veI~~~p~~~~~~ 505 (508)
++++|+|||+... ++++|+.+|...-++
T Consensus 264 ~~~~~iDGE~~~~-------~p~~i~v~p~al~v~ 291 (304)
T PRK13337 264 KMQLNLDGEYGGK-------LPAEFENLYRHIEVF 291 (304)
T ss_pred CCeEEeCCCcCCC-------CCEEEEEecceEEEE
Confidence 8999999999853 349999999876544
No 9
>PRK00861 putative lipid kinase; Reviewed
Probab=100.00 E-value=3.8e-41 Score=342.20 Aligned_cols=280 Identities=19% Similarity=0.199 Sum_probs=210.7
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
|+++++|+||.||++++.+.+++++..|.+.-.|++ +.|+..+|+.++++++. .++.+.||++|||||
T Consensus 2 ~~~~~iI~NP~sG~~~~~~~~~~i~~~l~~~~~~~~-------~~t~~~~~a~~~a~~~~-----~~~~d~vv~~GGDGT 69 (300)
T PRK00861 2 TRSACLIFNPVAGQGNPEVDLALIRAILEPEMDLDI-------YLTTPEIGADQLAQEAI-----ERGAELIIASGGDGT 69 (300)
T ss_pred CceEEEEECCCCCCCchhhhHHHHHHHHHhcCceEE-------EEccCCCCHHHHHHHHH-----hcCCCEEEEECChHH
Confidence 578999999999998888888888888876311333 46778899999998764 256789999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCccchHHHH
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFAWKSAV 239 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~~~av 239 (508)
||+|+|+|.+ ..+|||+||+||||||||+||+ |.++.+++
T Consensus 70 l~evv~~l~~-------~~~~lgviP~GTgNdfAr~lgi---------------------------------~~~~~~a~ 109 (300)
T PRK00861 70 LSAVAGALIG-------TDIPLGIIPRGTANAFAAALGI---------------------------------PDTIEEAC 109 (300)
T ss_pred HHHHHHHHhc-------CCCcEEEEcCCchhHHHHHcCC---------------------------------CCCHHHHH
Confidence 9999999975 4689999999999999999999 77766666
Q ss_pred HHHHHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccceEEeEEeeeehHHHhhh
Q 010507 240 KRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYG 319 (508)
Q Consensus 240 ~~il~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~F~Ny~sIG~DA~Va~~ 319 (508)
+. +.+|+++++|+.. ++ +++|+|.+|+||||+|++.
T Consensus 110 ~~----i~~g~~~~iDlg~----------------------------------vn------~~~fin~a~~G~~a~v~~~ 145 (300)
T PRK00861 110 RT----ILQGKTRRVDVAY----------------------------------CN------GQPMILLAGIGFEAETVEE 145 (300)
T ss_pred HH----HHcCCcEEeeEEE----------------------------------EC------CEEEEEEEeccHHHHHHHH
Confidence 65 4568888888422 12 4799999999999999998
Q ss_pred hhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEecCCC
Q 010507 320 FHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHN 399 (508)
Q Consensus 320 f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N~~~ 399 (508)
.++.++ .++ |+++|...+++.++.+++ ++++++ .+ ++.++. +...++++|.++
T Consensus 146 ~~~~~k-------~~~-G~~aY~~~~l~~l~~~~~-------------~~~~i~---~d-g~~~~~--~~~~i~v~N~~~ 198 (300)
T PRK00861 146 ADREAK-------NRF-GILAYILSGLQQLRELES-------------FEVEIE---TE-DQIITT--NAVAVTVANAAP 198 (300)
T ss_pred hhHHHH-------hcc-cHHHHHHHHHHHhccCCC-------------eeEEEE---EC-CeEEEE--EEEEEEEECCCC
Confidence 876543 234 999999999998765543 334433 12 344332 356788999986
Q ss_pred CCccccccCCCCchhhcccCCcccCCCCCcEEEEEeCC--hhHHHH----HHHhhhCCe-------EEEeeeeEEEEecC
Q 010507 400 YASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQ--GWHASF----VMVELISAK-------HIAQAAAIRLEFRG 466 (508)
Q Consensus 400 ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~--~~~~~~----l~~~l~~g~-------~l~qa~~i~I~~~~ 466 (508)
|+++.. .|+|.|+++||+|||++++. .++++. ++..++.|+ +..++++++|+++
T Consensus 199 ~~~~~~------------~g~p~a~~~DG~ldv~iv~~~~~~~~l~~~~~l~~~~~~g~~~~~~~v~~~~~~~i~I~~~- 265 (300)
T PRK00861 199 PTSVLA------------QGPGAVIPDDGLLDVTIVAPKNLAEAVAASYHLLQTALQGNPAERDDIGYLRAKQVKITTD- 265 (300)
T ss_pred cccccc------------cCCCCCCCCCceEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCCCCceEEEEccEEEEEeC-
Confidence 533211 12368999999999999976 455543 333344453 4568999999987
Q ss_pred CCcccceEEecCcccCCCCCCCCCeEEEEEEEecccccc
Q 010507 467 GEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMI 505 (508)
Q Consensus 467 ~~~~~~~~qiDGE~~~~~~~~~~~~~veI~~~p~~~~~~ 505 (508)
+++++|+|||+... ++++|+++|.+.-++
T Consensus 266 ---~~~~~~~DGE~~~~-------~p~~i~v~p~al~v~ 294 (300)
T PRK00861 266 ---PPQKVVIDGEVVGT-------TPIEIECLPRSLKVF 294 (300)
T ss_pred ---CCeEEEECCccCCC-------ceEEEEEECCEEEEE
Confidence 78999999999752 459999999876655
No 10
>PRK13055 putative lipid kinase; Reviewed
Probab=100.00 E-value=4.3e-41 Score=347.54 Aligned_cols=286 Identities=16% Similarity=0.157 Sum_probs=216.0
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
|+++++|+||.||++++.+.+++++.+|..... |++. ..|+..++++++++++. ..+.++|||+||||
T Consensus 2 ~~r~~iI~NP~sG~~~~~~~~~~i~~~l~~~g~~~~i~------~t~~~~~~a~~~~~~~~-----~~~~d~vvv~GGDG 70 (334)
T PRK13055 2 QKRARLIYNPTSGQEIMKKNVADILDILEQAGYETSAF------QTTPEPNSAKNEAKRAA-----EAGFDLIIAAGGDG 70 (334)
T ss_pred CceEEEEECCCCCchhHHHHHHHHHHHHHHcCCeEEEE------EeecCCccHHHHHHHHh-----hcCCCEEEEECCCC
Confidence 578999999999999988899999999987653 3321 12335678888887753 24678999999999
Q ss_pred hHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCcc-chHH
Q 010507 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPF-AWKS 237 (508)
Q Consensus 159 Tv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~-~~~~ 237 (508)
|||+|+|+|.+. ...+||||||+||||||||+||+ |. ++.+
T Consensus 71 Tl~evvngl~~~-----~~~~~LgiiP~GTgNdfAr~Lgi---------------------------------~~~~~~~ 112 (334)
T PRK13055 71 TINEVVNGIAPL-----EKRPKMAIIPAGTTNDYARALKI---------------------------------PRDNPVE 112 (334)
T ss_pred HHHHHHHHHhhc-----CCCCcEEEECCCchhHHHHHcCC---------------------------------CCcCHHH
Confidence 999999999864 25689999999999999999999 76 6666
Q ss_pred HHHHHHHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccceEEeEEeeeehHHHh
Q 010507 238 AVKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVA 317 (508)
Q Consensus 238 av~~il~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~F~Ny~sIG~DA~Va 317 (508)
+++.+ ..|+++++|+.. ++ .++||+|.+|+||||+|+
T Consensus 113 a~~~l----~~g~~~~vD~g~----------------------------------v~-----~~~~F~n~ag~G~da~v~ 149 (334)
T PRK13055 113 AAKVI----LKNQTIKMDIGR----------------------------------AN-----EDKYFINIAAGGSLTELT 149 (334)
T ss_pred HHHHH----HcCCcEEeeEEE----------------------------------EC-----CCcEEEEEehhccchHHH
Confidence 66544 458888888422 11 147999999999999999
Q ss_pred hhhhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEecC
Q 010507 318 YGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNL 397 (508)
Q Consensus 318 ~~f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N~ 397 (508)
+..+..++ .++ |+++|...+++.++.+++ +++++. .++ .... .+...++++|.
T Consensus 150 ~~~~~~~k-------~~~-G~laY~~~~~~~l~~~~~-------------~~~~i~---~d~-~~~~--~~~~~~~v~n~ 202 (334)
T PRK13055 150 YSVPSQLK-------SMF-GYLAYLAKGAELLPRVSP-------------VPVRIT---YDE-GVFE--GKISMFFLALT 202 (334)
T ss_pred HhcCHHHH-------hhc-cHHHHHHHHHHHHHhcCC-------------eeEEEE---ECC-EEEE--EEEEEEEEEcC
Confidence 88876543 344 999999999998865543 333332 122 3322 23567778999
Q ss_pred CCCCccccccCCCCchhhcccCCcccCCCCCcEEEEEeCC--hhHHHHHHHhhhC-Ce-------EEEeeeeEEEEecCC
Q 010507 398 HNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQ--GWHASFVMVELIS-AK-------HIAQAAAIRLEFRGG 467 (508)
Q Consensus 398 ~~ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~--~~~~~~l~~~l~~-g~-------~l~qa~~i~I~~~~~ 467 (508)
++|+||..++ |.++++||+|||++++. .++++.++..++. |+ +..++++++|++.
T Consensus 203 ~~~Gg~~~~~-------------p~a~~~DG~ldv~i~~~~~~~~~l~~~~~~~~~G~~~~~~~v~~~~~~~i~I~~~-- 267 (334)
T PRK13055 203 NSVGGFEQIV-------------PDAKLDDGKFTLIIVKTANLFELLHLMALILNGGKHIDDPRVIYIKTSKLTIEPL-- 267 (334)
T ss_pred cccCCccccC-------------CCCcCCCceEEEEEEcCCCHHHHHHHHHHHHhCCCCCCCCcEEEEEccEEEEEeC--
Confidence 9998887765 89999999999999977 5666666655555 53 4468899999874
Q ss_pred CcccceEEecCcccCCCCCCCCCeEEEEEEEeccccccc
Q 010507 468 EWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMIS 506 (508)
Q Consensus 468 ~~~~~~~qiDGE~~~~~~~~~~~~~veI~~~p~~~~~~~ 506 (508)
..+++++|+|||+... ++++|+.+|.+.-++.
T Consensus 268 ~~~~~~~~iDGE~~~~-------~pv~i~v~p~al~v~~ 299 (334)
T PRK13055 268 GDDRLMVNLDGEYGGD-------APMTFENLKQHIEFFA 299 (334)
T ss_pred CCCcceEeeCCCcCCC-------CcEEEEEEcCeEEEEe
Confidence 1246899999999753 3599999998766553
No 11
>PRK13054 lipid kinase; Reviewed
Probab=100.00 E-value=2.5e-40 Score=336.60 Aligned_cols=282 Identities=20% Similarity=0.214 Sum_probs=209.0
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 79 ~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
+|+++++|+||++++ .+.+..+...|.+.+. ++. .+.|+..+|+.++++++. ..+.+.||++||||
T Consensus 2 ~~~~~~~i~N~~~~~---~~~~~~~~~~l~~~g~-~~~-----v~~t~~~~~a~~~a~~~~-----~~~~d~vvv~GGDG 67 (300)
T PRK13054 2 TFPKSLLILNGKSAG---NEELREAVGLLREEGH-TLH-----VRVTWEKGDAARYVEEAL-----ALGVATVIAGGGDG 67 (300)
T ss_pred CCceEEEEECCCccc---hHHHHHHHHHHHHcCC-EEE-----EEEecCCCcHHHHHHHHH-----HcCCCEEEEECCcc
Confidence 578999999999763 2445555566665543 322 246778899999988763 24679999999999
Q ss_pred hHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCccchHHH
Q 010507 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFAWKSA 238 (508)
Q Consensus 159 Tv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~~~a 238 (508)
|||+|+|+|.+... ..++|||+||+||||||||+||+ |.++.++
T Consensus 68 Tl~evv~~l~~~~~---~~~~~lgiiP~GTgNdfar~lgi---------------------------------~~~~~~a 111 (300)
T PRK13054 68 TINEVATALAQLEG---DARPALGILPLGTANDFATAAGI---------------------------------PLEPDKA 111 (300)
T ss_pred HHHHHHHHHHhhcc---CCCCcEEEEeCCcHhHHHHhcCC---------------------------------CCCHHHH
Confidence 99999999986421 24689999999999999999999 7777666
Q ss_pred HHHHHHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccc-eEEeEEeeeehHHHh
Q 010507 239 VKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEG-VFYNYFSIGMDAQVA 317 (508)
Q Consensus 239 v~~il~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~-~F~Ny~sIG~DA~Va 317 (508)
++. +.+|.++++|+.++ + ++ ||+|.+|+||||+|+
T Consensus 112 ~~~----i~~g~~~~iDlg~v----------------------------------~------~~~~f~n~~~~G~~a~v~ 147 (300)
T PRK13054 112 LKL----AIEGRAQPIDLARV----------------------------------N------DRTYFINMATGGFGTRVT 147 (300)
T ss_pred HHH----HHhCCceEEEEEEE----------------------------------c------CceEEEEEeecchhHHHH
Confidence 554 44588888885331 1 24 999999999999999
Q ss_pred hhhhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEecC
Q 010507 318 YGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNL 397 (508)
Q Consensus 318 ~~f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N~ 397 (508)
++.++..+ .++ |+++|...+++.++.+++ ++++++ .+ ++..+ .+...++++|.
T Consensus 148 ~~~~~~~k-------~~~-G~~~Y~~~~l~~l~~~~~-------------~~~~i~---~d-~~~~~--~~~~~~~v~N~ 200 (300)
T PRK13054 148 TETPEKLK-------AAL-GGVAYLIHGLMRMDTLKP-------------DRCEIR---GP-DFHWQ--GDALVIGIGNG 200 (300)
T ss_pred HhhHHHHH-------hcc-chHHHHHHHHHHHhhCCC-------------eEEEEE---eC-CcEEE--eeEEEEEEECC
Confidence 98866432 234 999999999998765443 344443 12 23332 34567889999
Q ss_pred CCCCccccccCCCCchhhcccCCcccCCCCCcEEEEEeCChhHHHHHHHhhhCC-------eEEEeeeeEEEEecCCCcc
Q 010507 398 HNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQGWHASFVMVELISA-------KHIAQAAAIRLEFRGGEWK 470 (508)
Q Consensus 398 ~~ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~~~~~~~l~~~l~~g-------~~l~qa~~i~I~~~~~~~~ 470 (508)
++|+||+.++ |+|+++||+|||++++..+.++..+..+..| .+..++++++|+++ +
T Consensus 201 ~~~ggg~~~~-------------p~a~~~DG~ldv~~~~~~~~~l~~l~~~~~g~~~~~~~v~~~~~~~v~i~~~----~ 263 (300)
T PRK13054 201 RQAGGGQQLC-------------PEALINDGLLDLRILPAPQELLPTLLSTLTGGSEDNPNIIRARLPWLEIQAP----H 263 (300)
T ss_pred CcCCCCcccC-------------CCCcCCCCeEEEEEECCHHHHHHHHHHHHhCCCCCCCcEEEEECCEEEEEcC----C
Confidence 9999998775 8999999999999998844444444333333 34568999999976 7
Q ss_pred cceEEecCcccCCCCCCCCCeEEEEEEEecccccc
Q 010507 471 DAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMI 505 (508)
Q Consensus 471 ~~~~qiDGE~~~~~~~~~~~~~veI~~~p~~~~~~ 505 (508)
++++|+|||+... ++++|+++|.+.-++
T Consensus 264 ~~~~~iDGE~~~~-------~p~~i~v~p~al~vl 291 (300)
T PRK13054 264 ELTFNLDGEPLSG-------RHFRIEVLPAALRCR 291 (300)
T ss_pred CCEEEeCCCcCCC-------ccEEEEEEcCeeEEE
Confidence 8999999999852 359999999876554
No 12
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=100.00 E-value=4.2e-40 Score=332.86 Aligned_cols=280 Identities=20% Similarity=0.234 Sum_probs=211.4
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
|+++++|+||.||++.+.+.++++++.|.+.+. +.+ +.|+..++++.+++++. ..+.+.||++||||
T Consensus 1 ~~~~~ii~Np~sg~~~~~~~~~~i~~~l~~~~~~~~~-------~~t~~~~~~~~~~~~~~-----~~~~d~ivv~GGDG 68 (293)
T TIGR00147 1 MAEAPAILNPTAGKSNDNKPLREVIMLLREEGMEIHV-------RVTWEKGDAARYVEEAR-----KFGVDTVIAGGGDG 68 (293)
T ss_pred CceEEEEECCCccchhhHHHHHHHHHHHHHCCCEEEE-------EEecCcccHHHHHHHHH-----hcCCCEEEEECCCC
Confidence 578999999999998888888999988877654 333 34555666666655432 24578999999999
Q ss_pred hHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCccchHHH
Q 010507 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFAWKSA 238 (508)
Q Consensus 159 Tv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~~~a 238 (508)
|+++|++++.+. ...||||+||+||+|||||+||+ |.++.++
T Consensus 69 Tl~~v~~~l~~~-----~~~~~lgiiP~Gt~N~~a~~l~i---------------------------------~~~~~~~ 110 (293)
T TIGR00147 69 TINEVVNALIQL-----DDIPALGILPLGTANDFARSLGI---------------------------------PEDLDKA 110 (293)
T ss_pred hHHHHHHHHhcC-----CCCCcEEEEcCcCHHHHHHHcCC---------------------------------CCCHHHH
Confidence 999999999763 24579999999999999999999 7666655
Q ss_pred HHHHHHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccce-EEeEEeeeehHHHh
Q 010507 239 VKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGV-FYNYFSIGMDAQVA 317 (508)
Q Consensus 239 v~~il~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~-F~Ny~sIG~DA~Va 317 (508)
++. +.++..+++|+.+ ++ +++ |+|++|+|+||+++
T Consensus 111 ~~~----l~~~~~~~~Dlg~----------------------------------v~------~~~~fln~~g~G~~a~v~ 146 (293)
T TIGR00147 111 AKL----VIAGDARAIDMGQ----------------------------------VN------KQYCFINMAGGGFGTEIT 146 (293)
T ss_pred HHH----HHcCCceEEEEEE----------------------------------EC------CeEEEEEEEeechhhHhH
Confidence 544 4567888888421 12 378 99999999999999
Q ss_pred hhhhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEecC
Q 010507 318 YGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNL 397 (508)
Q Consensus 318 ~~f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N~ 397 (508)
+.++...+ .++ |+++|...+++.++.+++. .++++++ ++.++. +...++++|.
T Consensus 147 ~~~~~~~k-------~~~-g~~~Y~~~~l~~l~~~~~~-----------~~~i~~d------~~~~~~--~~~~~~v~n~ 199 (293)
T TIGR00147 147 TETPEKLK-------AAL-GSLSYILSGLMRMDTLQPF-----------RCEIRGE------GEHWQG--EAVVFLVGNG 199 (293)
T ss_pred hhCCHHHH-------hcc-chHHHHHHHHHHHhhCCCe-----------eEEEEEC------CeEEEe--eEEEEEEeCC
Confidence 88865432 345 9999999999887654431 2333332 344433 3456778899
Q ss_pred CCCCccccccCCCCchhhcccCCcccCCCCCcEEEEEeCC--hhHHHHHHHhhhCCe-------EEEeeeeEEEEecCCC
Q 010507 398 HNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQ--GWHASFVMVELISAK-------HIAQAAAIRLEFRGGE 468 (508)
Q Consensus 398 ~~ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~--~~~~~~l~~~l~~g~-------~l~qa~~i~I~~~~~~ 468 (508)
++|+||+.++ |.++++||+|||++++. .+.+..++..+..|+ +..++++++|+++
T Consensus 200 ~~~gg~~~~~-------------p~a~~~DG~l~v~~v~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~i~~~--- 263 (293)
T TIGR00147 200 RQAGGGQKLA-------------PDASINDGLLDLRIFTNDNLLPALVLTLMSDEGKHTDNPNIIYGKASRIDIQTP--- 263 (293)
T ss_pred cccCCCcccC-------------CccccCCCeeEEEEEcCCCHHHHHHHHHHHhcCCCCCCCcEEEEEccEEEEEcC---
Confidence 9999998876 88999999999999976 566666655555553 5568999999986
Q ss_pred cccceEEecCcccCCCCCCCCCeEEEEEEEeccccc
Q 010507 469 WKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLM 504 (508)
Q Consensus 469 ~~~~~~qiDGE~~~~~~~~~~~~~veI~~~p~~~~~ 504 (508)
+++++|+|||++... +++|+.+|.+.-+
T Consensus 264 -~~~~~~iDGE~~~~~-------p~~i~v~p~al~~ 291 (293)
T TIGR00147 264 -HKITFNLDGEPLGGT-------PFHIEILPAHLRC 291 (293)
T ss_pred -CCcEEEeCCCcCCCC-------cEEEEEEhhccEE
Confidence 789999999998643 4899999987544
No 13
>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=2.1e-39 Score=330.87 Aligned_cols=284 Identities=23% Similarity=0.308 Sum_probs=225.5
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 79 ~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
.|+++.+|+||.||.+.+.+.++++++.|.++. +++.. +.|+..+||.+++++++ ..+.|.||++||||
T Consensus 1 ~~~~~~~i~Np~sG~~~~~~~~~~~~~~l~~~g-~~~~~-----~~t~~~g~a~~~a~~a~-----~~~~D~via~GGDG 69 (301)
T COG1597 1 RMKKALLIYNPTSGKGKAKKLLREVEELLEEAG-HELSV-----RVTEEAGDAIEIAREAA-----VEGYDTVIAAGGDG 69 (301)
T ss_pred CCceEEEEEcccccccchhhHHHHHHHHHHhcC-CeEEE-----EEeecCccHHHHHHHHH-----hcCCCEEEEecCcc
Confidence 367899999999999999999999999998864 44443 45556689999999875 35899999999999
Q ss_pred hHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCccchHHH
Q 010507 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFAWKSA 238 (508)
Q Consensus 159 Tv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~~~a 238 (508)
|||+|+|+|.+.+ .+||||||+||+|||||+||| |.+ .
T Consensus 70 Tv~evingl~~~~------~~~LgilP~GT~NdfAr~Lgi---------------------------------p~~---~ 107 (301)
T COG1597 70 TVNEVANGLAGTD------DPPLGILPGGTANDFARALGI---------------------------------PLD---D 107 (301)
T ss_pred hHHHHHHHHhcCC------CCceEEecCCchHHHHHHcCC---------------------------------Cch---h
Confidence 9999999999852 233999999999999999999 774 2
Q ss_pred HHHHHHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccc-eEEeEEeeeehHHHh
Q 010507 239 VKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEG-VFYNYFSIGMDAQVA 317 (508)
Q Consensus 239 v~~il~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~-~F~Ny~sIG~DA~Va 317 (508)
+..+++.+.+|+.+.+|+. . .+ ++ ||+|.+|+||||+|+
T Consensus 108 ~~~Al~~i~~g~~~~vDlg-----------------------------~-----~~------~~~~fin~a~~G~~a~~~ 147 (301)
T COG1597 108 IEAALELIKSGETRKVDLG-----------------------------Q-----VN------GRRYFINNAGIGFDAEVV 147 (301)
T ss_pred HHHHHHHHHcCCeEEEeeh-----------------------------h-----cC------CcceEEEEeecchhHHHH
Confidence 4445556667999999842 1 11 24 999999999999999
Q ss_pred hhhhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEecC
Q 010507 318 YGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNL 397 (508)
Q Consensus 318 ~~f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N~ 397 (508)
++.+..|++ ++ |+++|+..++..+...+||. ++++++ .+..+. ....+++.|.
T Consensus 148 ~~~~~~~k~-------~~-g~~~y~~~~~~~l~~~~~~~-----------~~i~~d------~~~~~~--~~~~~~~~~~ 200 (301)
T COG1597 148 AAVEEERKK-------GF-GRLAYALAGLAVLARLKPFR-----------IEIEYD------GKTFEG--EALALLVFNG 200 (301)
T ss_pred HhhcHHHHh-------cc-chHHHHHHHHHhccccCCCc-----------EEEEEc------CcEEEE--EEEEEEEecC
Confidence 999998863 34 99999999999887666652 556554 232222 2467778888
Q ss_pred CCCCccccccCCCCchhhcccCCcccCCCCCcEEEEEeCC--hhHHHHHHHhhhCCe-------EEEeeeeEEEEecCCC
Q 010507 398 HNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQ--GWHASFVMVELISAK-------HIAQAAAIRLEFRGGE 468 (508)
Q Consensus 398 ~~ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~--~~~~~~l~~~l~~g~-------~l~qa~~i~I~~~~~~ 468 (508)
++++||..+. |+++++||+|++++++. .+.+..++..++.|. ...+++.++|+++
T Consensus 201 ~~~gg~~~~~-------------p~a~~~dG~l~~~i~~~~~~~~~~~l~~~~~~G~~~~~~~v~~~~~~~~~i~~~--- 264 (301)
T COG1597 201 NSYGGGMKLA-------------PDASLDDGLLDVYILKPQSLLELLALLPDLLRGKHLENPDVEYLRAKKLEITSD--- 264 (301)
T ss_pred cccccccccC-------------CcCCCCCceEEEEEEccccHHHHHHHHHHHhCCCccCCCCeEEEeccEEEEEcC---
Confidence 8888887764 89999999999999987 566777777777663 3468889999987
Q ss_pred cccceEEecCcccCCCCCCCCCeEEEEEEEeccccccc
Q 010507 469 WKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMIS 506 (508)
Q Consensus 469 ~~~~~~qiDGE~~~~~~~~~~~~~veI~~~p~~~~~~~ 506 (508)
.++++++|||+.... +++|+.+|.+.-++.
T Consensus 265 -~~~~~~~DGE~~~~~-------p~~i~~~p~al~vl~ 294 (301)
T COG1597 265 -PPIPVNLDGEYLGKT-------PVTIEVLPGALRVLV 294 (301)
T ss_pred -CCceEeeCCccCCCC-------cEEEEEecccEEEEc
Confidence 899999999998633 399999999876654
No 14
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=100.00 E-value=3.3e-42 Score=371.73 Aligned_cols=174 Identities=28% Similarity=0.492 Sum_probs=143.2
Q ss_pred eEEeEEeeeehHHHhhhhhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceE
Q 010507 303 VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQ 382 (508)
Q Consensus 303 ~F~Ny~sIG~DA~Va~~f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~ 382 (508)
+|+||||||+||.|+..||..|++||+++++|.+|+|||+..|.++++ .+.| +++.+.+.++ || |+.
T Consensus 614 VMNNYFGIGlDAKISLDFhnKReEhPeKcrSR~kn~MWYGvLGtKeLL-hrTy------rnLEQRV~LE-----CD-G~~ 680 (1099)
T KOG1170|consen 614 VMNNYFGIGLDAKISLDFHNKREEHPEKCRSRSKNFMWYGVLGTKELL-HRTY------RNLEQRVKLE-----CD-GVP 680 (1099)
T ss_pred hhccccccccceeEeeecccccccChHHHhHHhhhcchhhhcchHHHH-HHHH------HhHHHHeeee-----cC-Ccc
Confidence 799999999999999999999999999999999999999999999985 3333 4565556654 54 688
Q ss_pred EEecCcceEEEEecCCCCCccccccCCCCchhhcccCCcccCCCCCcEEEEEeCChhHHHHHHHhhh--CCeEEEeeeeE
Q 010507 383 VAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQGWHASFVMVELI--SAKHIAQAAAI 460 (508)
Q Consensus 383 i~~~~~~~~lvv~N~~~ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~~~~~~~l~~~l~--~g~~l~qa~~i 460 (508)
+++| ++.+|||+|+|+|.||+|.||..++. -.|..++.||+.||||.+=+..+++. .+++ ...||+||+.|
T Consensus 681 i~lP-~LQGIviLNIpSyaGGtNFWGsnk~d----d~f~apSfDDriLEVVAvFGsvqMA~--SRvI~LqhHRIAQCr~V 753 (1099)
T KOG1170|consen 681 IDLP-SLQGIVILNIPSYAGGTNFWGSNKDD----DEFTAPSFDDRILEVVAVFGSVQMAT--SRVIRLQHHRIAQCRHV 753 (1099)
T ss_pred cCCc-ccceeEEEecccccCcccccCCCCCC----CcccCCCcccceeEEeeeehhHHHHH--HHHHHhhhhhhhhceEE
Confidence 9898 59999999999999999999987754 34788999999999998877655542 2222 45678999999
Q ss_pred EEEecCCCcccceEEecCcccCCCCCCCCCeEEEEEEEecccc
Q 010507 461 RLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSL 503 (508)
Q Consensus 461 ~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~veI~~~p~~~~ 503 (508)
+|.+.+ .+.+|+|+|||+|.|||+ .+.|-+...+.+
T Consensus 754 ~I~IlG--DE~IPVQvDGEaWlQPPG-----~irIvHKNRaQm 789 (1099)
T KOG1170|consen 754 RIVILG--DEGIPVQVDGEAWLQPPG-----IIRIVHKNRAQM 789 (1099)
T ss_pred EEEEec--CCCCceeecCccccCCCc-----eeeeehhhhHHH
Confidence 999874 488999999999999975 577766555443
No 15
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=100.00 E-value=1.4e-38 Score=343.19 Aligned_cols=300 Identities=18% Similarity=0.188 Sum_probs=214.1
Q ss_pred CCCCeEEEEEcCCCCCCChhhHH-HHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcC
Q 010507 78 PPEAPMVVFINSRSGGRHGPELK-ERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (508)
Q Consensus 78 ~~~~~~lviiNp~sg~~~~~~~~-~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GG 156 (508)
.++++++||+||.||++++.+.+ +.++.+|...++ ++. .+.|++.+||++++++++ ..+++.||++||
T Consensus 109 ~~~kr~lvIvNP~SGkg~a~k~~~~~v~~~L~~~gi-~~~-----v~~T~~~ghA~~la~~~~-----~~~~D~VV~vGG 177 (481)
T PLN02958 109 GRPKRLLVFVNPFGGKKSASKIFFDVVKPLLEDADI-QLT-----IQETKYQLHAKEVVRTMD-----LSKYDGIVCVSG 177 (481)
T ss_pred cCCcEEEEEEcCCCCCcchhHHHHHHHHHHHHHcCC-eEE-----EEeccCccHHHHHHHHhh-----hcCCCEEEEEcC
Confidence 56789999999999999988876 468888877653 322 246788999999998764 356899999999
Q ss_pred chhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhh----CCccceeeeeeehhhhhhhccccccccccccCCCCc
Q 010507 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSF----GWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFP 232 (508)
Q Consensus 157 DGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p 232 (508)
|||||+|+|+|...+.+.....+||||||.||||||||+| |+ |
T Consensus 178 DGTlnEVvNGL~~~~~~~~~~~~pLGiIPaGTgNdfArsL~~~~gi---------------------------------p 224 (481)
T PLN02958 178 DGILVEVVNGLLEREDWKTAIKLPIGMVPAGTGNGMAKSLLDSVGE---------------------------------P 224 (481)
T ss_pred CCHHHHHHHHHhhCccccccccCceEEecCcCcchhhhhhccccCC---------------------------------C
Confidence 9999999999987533222357899999999999999999 87 7
Q ss_pred cchHHHHHHHHHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccc-eEEeEEeee
Q 010507 233 FAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEG-VFYNYFSIG 311 (508)
Q Consensus 233 ~~~~~av~~il~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~-~F~Ny~sIG 311 (508)
.++.+|+.. +..|..+++|+..++- + . .+ +++|++|+|
T Consensus 225 ~~~~~A~~~----I~~g~~~~vDlg~v~~------------------------~--------~-----~~~f~vn~~g~G 263 (481)
T PLN02958 225 CSATNAVLA----IIRGHKCSLDVATILQ------------------------G--------E-----TKFFSVLMLAWG 263 (481)
T ss_pred cCHHHHHHH----HHcCCceEEeEEEEEc------------------------C--------C-----ceEEEEEeeeee
Confidence 776666654 4568889999654321 0 0 13 457999999
Q ss_pred ehHHHhhhhhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEE---------------Ee--
Q 010507 312 MDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHV---------------KK-- 374 (508)
Q Consensus 312 ~DA~Va~~f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i---------------~~-- 374 (508)
|||+|....++. |+.|++.|...+++.++..++.. .++.+ +.
T Consensus 264 fdAdV~~~se~k----------r~lG~lrY~~~~l~~l~~~r~y~-----------~~I~~~~a~~~~~~~~~~~~~~~~ 322 (481)
T PLN02958 264 LVADIDIESEKY----------RWMGSARLDFYGLQRILCLRQYN-----------GRISFVPAPGFEAYGEPTSYNGES 322 (481)
T ss_pred hhhhhhcccccc----------cccchHHHHHHHHHHHHhcCCcc-----------eEEEEEeccccccccccccccccc
Confidence 999996553322 23499999999999987654432 11211 00
Q ss_pred --------------------eecCCceEEEecCcceEEEEecCCCCCccccccCCCCchhhcccCCcccCCCCCcEEEEE
Q 010507 375 --------------------VNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFG 434 (508)
Q Consensus 375 --------------------v~~~~~e~i~~~~~~~~lvv~N~~~ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~ 434 (508)
....+|+.++ ....+++++|.++|+||+.+. |.|+++||+|||++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~--~~fl~v~v~N~~~~Ggg~~ia-------------P~A~l~DG~LDlvi 387 (481)
T PLN02958 323 TSKEESGKDKQHGYQGPDVKLENLDWRTIK--GPFVSVWLHNVPWGGEDTLAA-------------PDAKFSDGYLDLIL 387 (481)
T ss_pred cccccccccccccccCCccccCCccceEee--cceeEEeeccCcccCCCcccC-------------CcccCCCCeEEEEE
Confidence 0001122221 112335589999999888764 89999999999999
Q ss_pred eCC--hhHHHHHHHhhhCCeE-------EEeeeeEEEEecCC---CcccceEEecCcccCCCCCCCCCeEEEEEEEeccc
Q 010507 435 LKQ--GWHASFVMVELISAKH-------IAQAAAIRLEFRGG---EWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQS 502 (508)
Q Consensus 435 l~~--~~~~~~l~~~l~~g~~-------l~qa~~i~I~~~~~---~~~~~~~qiDGE~~~~~~~~~~~~~veI~~~p~~~ 502 (508)
+++ .+.++.++..+..|+| +.++++++|+.... ..++.++|+|||+... ++++|+++|.+.
T Consensus 388 v~~~s~~~lL~~l~~~~~G~h~~~~~V~~~k~k~~~I~~~~~~~~~~~~~~i~iDGE~~~~-------~p~~i~v~~~al 460 (481)
T PLN02958 388 IKDCPKLALLALMTKLSDGTHVKSPYVMYLKVKAFVLEPGPRTDDPTKGGIIDSDGEVLAR-------GNGSYKCDQKAL 460 (481)
T ss_pred EcCCCHHHHHHHHHHHhCCCccCCCceEEEEEEEEEEEECCcccCcCcCCeEEECCcccCC-------CCceeeeccccc
Confidence 987 4566666666666654 56899999987421 1245789999999853 248888888765
Q ss_pred ccc
Q 010507 503 LMI 505 (508)
Q Consensus 503 ~~~ 505 (508)
.++
T Consensus 461 ~~~ 463 (481)
T PLN02958 461 MSY 463 (481)
T ss_pred ccc
Confidence 443
No 16
>PF00609 DAGK_acc: Diacylglycerol kinase accessory domain; InterPro: IPR000756 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. The DAG kinase domain is assumed to be an accessory domain. Upon cell stimulation, DAG kinase converts DAG into phosphatidate, initiating the resynthesis of phosphatidylinositols and attenuating protein kinase C activity. It catalyses the reaction: ATP + 1,2-diacylglycerol = ADP + 1,2-diacylglycerol 3-phosphate. The enzyme is stimulated by calcium and phosphatidylserine and phosphorylated by protein kinase C. This domain is always associated with IPR001206 from INTERPRO.; GO: 0004143 diacylglycerol kinase activity, 0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway
Probab=100.00 E-value=3.8e-35 Score=274.15 Aligned_cols=160 Identities=37% Similarity=0.638 Sum_probs=141.2
Q ss_pred eEEeEEeeeehHHHhhhhhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceE
Q 010507 303 VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQ 382 (508)
Q Consensus 303 ~F~Ny~sIG~DA~Va~~f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~ 382 (508)
+|+||||||+||+|+++||+.|+++|++|++|+.||++|+..+++++| ..+|. ++.+.+++.+ ||+.
T Consensus 1 v~~NYfsiG~DA~ia~~Fh~~R~~~P~~f~sr~~NK~~Y~~~g~k~~~-~~~~~------~~~~~i~l~~------dg~~ 67 (161)
T PF00609_consen 1 VMNNYFSIGVDAQIALGFHHSREKNPEKFNSRLLNKLWYAFFGFKALF-QRSCK------NLPKKIELEV------DGKE 67 (161)
T ss_pred CeEecccccHhhHHHHHHhhccccChhhhccHHHHHHHHHHHHHHHHH-hchhc------Cchhhccccc------CCee
Confidence 489999999999999999999999999999999999999999999997 55553 3334455543 3688
Q ss_pred EEecCcceEEEEecCCCCCccccccCCCCchhhcccCCcccCCCCCcEEEEEeCChhHHHHHHHhhhCCeEEEeeeeEEE
Q 010507 383 VAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQGWHASFVMVELISAKHIAQAAAIRL 462 (508)
Q Consensus 383 i~~~~~~~~lvv~N~~~ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~~~~~~~l~~~l~~g~~l~qa~~i~I 462 (508)
+++|.++++|+++|+++|+||.++|+..++.... .++..++++||+|||+++.++||++.++.++.+++|++|++.|+|
T Consensus 68 ~~lp~~~~~iv~lNIpSy~gG~~~W~~~~~~~~~-~~~~~~~~~Dg~lEVvg~~~~~hl~~~~~g~~~~~rl~Q~~~i~i 146 (161)
T PF00609_consen 68 VDLPSSLESIVFLNIPSYGGGVDLWGNSKPDRSK-LKFKKQSMDDGKLEVVGFRGSFHLGQIQAGLSSAKRLAQGRPIRI 146 (161)
T ss_pred EeeecceeEEEEEccccccCCcccccCCcccccc-cccccccccCceEEEEEEcCchhhhhhhhccCCceEeecCCEEEE
Confidence 8898779999999999999999999987765332 457889999999999999999999999999999999999999999
Q ss_pred EecCCCcc-cceEEecCcc
Q 010507 463 EFRGGEWK-DAFMQMDGEP 480 (508)
Q Consensus 463 ~~~~~~~~-~~~~qiDGE~ 480 (508)
+++ + ++|||+||||
T Consensus 147 ~~~----~~~~~~QvDGEp 161 (161)
T PF00609_consen 147 ETK----ENKVPFQVDGEP 161 (161)
T ss_pred EEC----CCceeEEeCCCC
Confidence 998 6 9999999997
No 17
>PLN02204 diacylglycerol kinase
Probab=100.00 E-value=9.9e-32 Score=291.81 Aligned_cols=318 Identities=14% Similarity=0.069 Sum_probs=209.9
Q ss_pred CCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEE
Q 010507 76 VQPPEAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVA 154 (508)
Q Consensus 76 ~~~~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~ 154 (508)
+..++++++|||||.||++++.+.++++..+|....+ +++ +.|+..+||.++++++... ....++.||++
T Consensus 155 ~~~r~k~llVivNP~sGkg~~~~~~~~V~p~f~~a~i~~~v-------~~T~~aghA~d~~~~~~~~--~l~~~D~VVaV 225 (601)
T PLN02204 155 EVGRPKNLLVFVHPLSGKGSGSRTWETVSPIFIRAKVKTKV-------IVTERAGHAFDVMASISNK--ELKSYDGVIAV 225 (601)
T ss_pred ccCCCceEEEEECCCCCCcchHHHHHHHHHHHHHcCCeEEE-------EEecCcchHHHHHHHHhhh--hccCCCEEEEE
Confidence 4567889999999999999999999999999987654 333 5788999999998765321 13578999999
Q ss_pred cCchhHHHHHHHHhhccc-------------------------------------C------------------------
Q 010507 155 GGDGTVGWVLGSVGELNK-------------------------------------Q------------------------ 173 (508)
Q Consensus 155 GGDGTv~~vl~~l~~~~~-------------------------------------~------------------------ 173 (508)
|||||+|||+|+|..... +
T Consensus 226 GGDGt~nEVlNGL~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 305 (601)
T PLN02204 226 GGDGFFNEILNGYLLSRLKVPYPPSPSDSVHSVQSRGSSSVHEPNETVHECDNEDHSPLLSDSVQEVMNFRTENGSCEGD 305 (601)
T ss_pred cCccHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999974210 0
Q ss_pred ------CCCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCccchHHHHHHHHHHhh
Q 010507 174 ------GREPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFAWKSAVKRTLQRAS 247 (508)
Q Consensus 174 ------~~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~~~av~~il~~i~ 247 (508)
.....++|||||.|||||||++++. +.++..++.. |.
T Consensus 306 ~~~~~~~~~~~~~lGIIPaGSgN~~a~~~~g---------------------------------~~dp~taa~~----Ii 348 (601)
T PLN02204 306 QDSDFPFPNERFRFGIIPAGSTDAIVMCTTG---------------------------------ERDPVTSALH----II 348 (601)
T ss_pred ccccccccCCCceEEEECCccHHHHHHHccC---------------------------------CCCHHHHHHH----HH
Confidence 0024578999999999999999876 6676555554 44
Q ss_pred cCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccceEEeEEeeeehHHHhhhhhhccccC
Q 010507 248 AGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEK 327 (508)
Q Consensus 248 ~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~F~Ny~sIG~DA~Va~~f~~~R~~~ 327 (508)
.|..+.+|+.+|+-... + ..++ ...+.+||+|.+|+||||+|+.+.++.|
T Consensus 349 ~G~~~~lDig~V~~~~~---------------------~-----~~~~-~~~~~ryf~s~ag~Gf~gdVi~esek~R--- 398 (601)
T PLN02204 349 LGRRVCLDIAQVVRWKT---------------------T-----STSE-IEPYVRYAASFAGYGFYGDVISESEKYR--- 398 (601)
T ss_pred hCCCeEeeEEEEecccc---------------------c-----cccc-ccccceEEEEEeecchHHHHHHHhhhhc---
Confidence 68899999866542100 0 0000 0012489999999999999998854433
Q ss_pred CCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEe------------cCc---c---
Q 010507 328 PYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAV------------PKS---V--- 389 (508)
Q Consensus 328 p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~------------~~~---~--- 389 (508)
++|++.|.+.+++.++.+++. .+++.++ + +.... ++. +
T Consensus 399 -------~mG~~rY~~~g~k~~~~~r~y-----------~~~V~~d-----~-~~~~~~~~~~~~~~~~~~~~~~~~~c~ 454 (601)
T PLN02204 399 -------WMGPKRYDYAGTKVFLKHRSY-----------EAEVAYL-----E-TESEKSKASSEARKRTGPKKSEKIVCR 454 (601)
T ss_pred -------ccchHHHHHHHHHHHHhCCCc-----------eEEEEEC-----C-eEeeecccccccccccccccccchhhh
Confidence 349999999999998765542 1344332 1 11110 100 0
Q ss_pred eEEEEecCCC---------------------CC----ccccccCCCCchhhcccCCcccCCCCCcEEEEEeCC--hhHHH
Q 010507 390 RAIVALNLHN---------------------YA----SGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQ--GWHAS 442 (508)
Q Consensus 390 ~~lvv~N~~~---------------------yg----GG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~--~~~~~ 442 (508)
..+.++|.+. +| +|.....+..+ +..+.-.|.|+++||.|||+++++ .+.++
T Consensus 455 ~~c~Vcn~~~~~~~~~~~p~~~~~~~~W~~~~G~f~~vG~~iis~~~~-rap~gl~pdA~l~DG~LDLilVr~~s~~~~L 533 (601)
T PLN02204 455 TNCSVCNTKVSTNSPSTTPNSCPEETRWLRSKGRFLSVGAAIISNRNE-RAPDGLVADAHLSDGFLHLILIKDCPHPLYL 533 (601)
T ss_pred hheeeecccccccccccccccccccccceeecCceEEeeeeccccccc-ccccccCCCCcCCCCeEEEEEECCCCHHHHH
Confidence 1245677541 11 11111111000 000012478999999999999987 33444
Q ss_pred HHHHhhh-C-C-------eEEEeeeeEEEEecCCCcccceEEecCcccCCCCCCCCCeEEEEEEEeccccc
Q 010507 443 FVMVELI-S-A-------KHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLM 504 (508)
Q Consensus 443 ~l~~~l~-~-g-------~~l~qa~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~veI~~~p~~~~~ 504 (508)
.++..+. . | .++.++++++|++. .++..+++|||.... +.++|+..|...-+
T Consensus 534 ~~L~~l~~~gG~~l~~~~Ve~~ktk~f~~~s~---~~~~~~niDGE~~~~-------~~v~v~V~~~al~l 594 (601)
T PLN02204 534 WHLTQLAKRGGEPLNFEFVEHHKTPAFTFTSF---GDESVWNLDGEIFQA-------HQLSAQVFRGLVNL 594 (601)
T ss_pred HHHHHHHhhcCccCCCCcEEEEEeeEEEEEEC---CCCceEEeCCCcCCC-------ccEEEEEEcCeeEE
Confidence 4444433 2 2 34568999999874 246779999999853 35888888876543
No 18
>KOG1116 consensus Sphingosine kinase, involved in sphingolipid metabolism [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.93 E-value=6.5e-25 Score=235.15 Aligned_cols=315 Identities=21% Similarity=0.229 Sum_probs=205.9
Q ss_pred CCCCCeEEEEEcCCCCCCChhhHHHH-HHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEE
Q 010507 77 QPPEAPMVVFINSRSGGRHGPELKER-LQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVA 154 (508)
Q Consensus 77 ~~~~~~~lviiNp~sg~~~~~~~~~~-l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~ 154 (508)
....++++|||||++|.|++.+++.. ++.+|.+..+ |++ .+|++++||+++++..+ ...+|.||++
T Consensus 176 ~~r~~~lLV~iNP~gGkGka~~~F~~~v~Pll~~A~i~~ev-------v~T~~~~HArei~rt~d-----l~kyDgIv~v 243 (579)
T KOG1116|consen 176 LKRPRRLLVFINPFGGKGKAKKLFKNHVEPLLSEAGISFEV-------VLTTRPNHAREIVRTLD-----LGKYDGIVCV 243 (579)
T ss_pred cCCCccEEEEECCCCCCccHHHHHHhhhhhhhhhcCceEEE-------EEecCccHHHHHHHhhh-----ccccceEEEe
Confidence 45668999999999999999888765 6667776654 544 57899999999999874 5789999999
Q ss_pred cCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCccc
Q 010507 155 GGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFA 234 (508)
Q Consensus 155 GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~ 234 (508)
||||++|||+|+|++.+++......|||+||+||||+||.++.|++. -.++
T Consensus 244 sGDGl~hEVlNGLl~R~D~~~~~klPigiiP~GSGNala~Sv~~~~~---------------------------~~~~-- 294 (579)
T KOG1116|consen 244 SGDGLLHEVLNGLLERPDWEAAVKLPIGIIPCGSGNALAKSVLWTNG---------------------------PDLP-- 294 (579)
T ss_pred cCCcCHHHhhhccccccchhhHhcCceeEeecCCccHHHHHhhcccC---------------------------cccc--
Confidence 99999999999999988766678899999999999999999999421 0111
Q ss_pred hHHHHHHHHHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccceEEeEEeeeehH
Q 010507 235 WKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDA 314 (508)
Q Consensus 235 ~~~av~~il~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~F~Ny~sIG~DA 314 (508)
+...+. +..|....+|.-.++. . .....+..++.+-||-|
T Consensus 295 ----~~a~l~-iirg~~t~~dv~~v~~------------------------~-----------~~~~~fSfLs~~wGlIA 334 (579)
T KOG1116|consen 295 ----LLATLL-IIRGRLTPMDVSVVEY------------------------A-----------GKDRHFSFLSAAWGLIA 334 (579)
T ss_pred ----hHHHHH-HHccCCCchheeehhh------------------------c-----------cCcceEEEEeeeeeeEE
Confidence 222222 3347777777533322 0 01126788999999999
Q ss_pred HHhhhhhhccccCCCccccCCCcchhhHHHHHhhhcccc---CcCCCCccccc-ccc--------------EE-------
Q 010507 315 QVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLT---PCISDPNLRGL-KNI--------------LR------- 369 (508)
Q Consensus 315 ~Va~~f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~---~~~~~~~~~~~-~~~--------------l~------- 369 (508)
+|-...++.|+ .|.+.|.+.++..++-.. .|..+--.+.. .+. +.
T Consensus 335 DiDI~SEk~R~----------mG~~Rf~lg~~~rl~~lr~Y~gri~ylp~~~k~~~~~~~~~~~~~~~~~~~~~~a~~~~ 404 (579)
T KOG1116|consen 335 DVDIESEKYRW----------MGPARFTLGAFLRLIQLRKYKGRIEYLPAKGKSAEPLPAHELEAADSEGCLSTHADTEP 404 (579)
T ss_pred ecccchHHHHh----------hcchhhhHHHHHHHHhccCCCceEEEecccccccCcccchhhccccccccccccccccc
Confidence 99888777664 377777777766553221 11000000000 000 00
Q ss_pred -----EEEE-------------------------------eeecCCceEEEecCcceE-EEEecCCCCCccccccCCCCc
Q 010507 370 -----MHVK-------------------------------KVNCSEWEQVAVPKSVRA-IVALNLHNYASGRNPWGNLSP 412 (508)
Q Consensus 370 -----i~i~-------------------------------~v~~~~~e~i~~~~~~~~-lvv~N~~~ygGG~~~wg~~~~ 412 (508)
...+ .....+|+...-. +... +.+.+. +.++.+.
T Consensus 405 s~~~~~~~~~~~~~~~~~s~~~e~s~~~~~~~~~~~p~~~~p~psdw~~~~~~-d~~~~~a~~~s-y~~~d~~------- 475 (579)
T KOG1116|consen 405 SEYPRLSVPKMSPKSVLRSPVSETSPVIPEDPLHLSPPLEEPLPSDWEVVPGV-DFVCILAILLS-YLGADMK------- 475 (579)
T ss_pred cccccccccccCccccccCcccccCcccCCccccCCCcccCCCCcceeeecCc-ceeeeehhhhh-hccCCcc-------
Confidence 0000 0000123322110 1111 112222 2222222
Q ss_pred hhhcccCCcccCCCCCcEEEEEeCCh---hHHHHHHHhhhCCeEE---------EeeeeEEEEecCCCcccceEEecCcc
Q 010507 413 EYLEKKGFVEAHADDGLLEIFGLKQG---WHASFVMVELISAKHI---------AQAAAIRLEFRGGEWKDAFMQMDGEP 480 (508)
Q Consensus 413 ~~~~~~g~~~a~~dDGlLEVv~l~~~---~~~~~l~~~l~~g~~l---------~qa~~i~I~~~~~~~~~~~~qiDGE~ 480 (508)
.+|.|..+||.++++++... -.++.++..+-+|.|+ ..+++++++-. ....++++|||.
T Consensus 476 ------~~P~A~~~dg~I~lv~~~~~~~r~~ll~~llald~gsh~~~~~p~v~~~~vra~r~epv---~~~~~~~vDGE~ 546 (579)
T KOG1116|consen 476 ------FAPAARPDDGLIHLVIVRAGGSRTQLLRLLLALDKGSHLHVECPFVKYVKVRAFRLEPV---TPSGYFAVDGEL 546 (579)
T ss_pred ------cccccccCCCeEEEEEEccCCcHHHHHHHHHhhcccccccccCCceeEEEeEEEEEEEe---cCCceEEecccE
Confidence 26999999999999999762 3466677777788774 35677888764 234899999999
Q ss_pred cCCCCCCCCCeEEEEEEEecccccccC
Q 010507 481 WKQPLNRDYSTFVEIKRVPFQSLMISG 507 (508)
Q Consensus 481 ~~~~~~~~~~~~veI~~~p~~~~~~~~ 507 (508)
+... | +++++.|..-.++.|
T Consensus 547 ~~~e-----p--~q~~v~p~~i~~~s~ 566 (579)
T KOG1116|consen 547 VPLE-----P--LQVQVLPGLILTLSG 566 (579)
T ss_pred eecc-----c--eeEEecccceeEEec
Confidence 8532 3 888888988877765
No 19
>smart00045 DAGKa Diacylglycerol kinase accessory domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain might either be an accessory domain or else contribute to the catalytic domain. Bacterial homologues are known.
Probab=99.88 E-value=8.3e-23 Score=190.44 Aligned_cols=160 Identities=33% Similarity=0.556 Sum_probs=121.5
Q ss_pred eEEeEEeeeehHHHhhhhhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceE
Q 010507 303 VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQ 382 (508)
Q Consensus 303 ~F~Ny~sIG~DA~Va~~f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~ 382 (508)
+|+|++||||||+|++++++.|+++|.++++++.|+++|...+++.+|.... +.....++++++ ++.
T Consensus 1 ~~~N~~giGfDA~V~~~~~~~r~~~~~~~~~~~~g~l~Y~~~~l~~l~~~~~-------~~~~~~~~i~~d------g~~ 67 (160)
T smart00045 1 VMNNYFSIGVDAHIALEFHNKREANPEKFNSRLKNKMWYFELGTKDLFFRTC-------KDLHERIELECD------GVD 67 (160)
T ss_pred CccccccccHhHHHHHHHHHHhhcCchhhcccceeeeeeeecchHHhhhccc-------cchhhceEEEEC------CEe
Confidence 4899999999999999999999888887777778999999999998864221 011112444442 344
Q ss_pred EEecCcceEEEEecCCCCCccccccCCCCchhhcccCCcccCCCCCcEEEEEeCChhHHHHHHHhhhCCeEEEeeeeEEE
Q 010507 383 VAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQGWHASFVMVELISAKHIAQAAAIRL 462 (508)
Q Consensus 383 i~~~~~~~~lvv~N~~~ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~~~~~~~l~~~l~~g~~l~qa~~i~I 462 (508)
.+.+.++.+++++|.++|+||+.+|+..+++| .++|+|+++||+|||+++++..++..++..-..+.++.|+++++|
T Consensus 68 ~~~~~~~~~v~v~N~~~~ggG~~i~p~~~~~~---~~~p~a~~~DG~ldv~~~~~~~~~~~~~~~~~~~v~~~~~~~v~i 144 (160)
T smart00045 68 VDLPNSLEGIAVLNIPSYGGGTNLWGTTDKED---LNFSKQSHDDGLLEVVGLTGAMHMAQIRQVGLAGRRIAQCSEVRI 144 (160)
T ss_pred ccCCCCccEEEEECCCccccCcccccCCcccc---cccCCCCCCCceEEEEEEcCchhhhhhhhccCCCceeecCceEEE
Confidence 44443467899999999999999997766666 368999999999999999987665544322235678899999884
Q ss_pred EecCCCcccceEEecCcc
Q 010507 463 EFRGGEWKDAFMQMDGEP 480 (508)
Q Consensus 463 ~~~~~~~~~~~~qiDGE~ 480 (508)
++. +.+++++|+|||+
T Consensus 145 ~i~--~~~~~~~q~DGE~ 160 (160)
T smart00045 145 TIK--TSKTIPMQVDGEP 160 (160)
T ss_pred EEe--cCCceeeecCCCC
Confidence 433 2388999999996
No 20
>PF00781 DAGK_cat: Diacylglycerol kinase catalytic domain; InterPro: IPR001206 The DAG-kinase catalytic domain or DAGKc domain is present in mammalian lipid kinases, such as diacylglycerol (DAG), ceramide and sphingosine kinases, as well as in related bacterial proteins [, ]. Eukaryotic DAG-kinase (2.7.1.107 from EC) catalyses the phosphorylation of DAG to phosphatidic acid, thus modulating the balance between the two signaling lipids. At least ten different isoforms have been identified in mammals, which form 5 groups characterised by different functional domains, such as the calcium-binding EF hand (see PDOC00018 from PROSITEDOC), PH (see PDOC50003 from PROSITEDOC), SAM (see PDOC50105 from PROSITEDOC) , DAG/PE-binding C1 domain (see PDOC00379 from PROSITEDOC) and ankyrin repeats (see PDOC50088 from PROSITEDOC) []. In bacteria, an integral membrane DAG kinase forms a homotrimeric protein that lacks the DAGKc domain (see PDOC00820 from PROSITEDOC). In contrast, the bacterial yegS protein is a soluble cytosolic protein that contains the DAGKc domain in the N-terminal part. YegS is a lipid kinase with two structural domains, wherein the active site is located in the interdomain cleft, C-terminal to the DAGKc domain which forms an alpha/beta fold []. The tertiary structure resembles that of NAD kinases and contains a metal-binding site in the C-terminal region [, ]. This domain is usually associated with an accessory domain (see IPR000756 from INTERPRO).; GO: 0004143 diacylglycerol kinase activity, 0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; PDB: 2JGR_A 2BON_A 3T5P_D 3S40_A 2P1R_A 2QV7_A 2QVL_A.
Probab=99.87 E-value=3.6e-22 Score=179.41 Aligned_cols=100 Identities=32% Similarity=0.529 Sum_probs=74.5
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCc-cEEEEEcCchh
Q 010507 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK-MRIVVAGGDGT 159 (508)
Q Consensus 82 ~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~-~~ivv~GGDGT 159 (508)
+++||+||+||++++. ++++++.|..... +++ +.|+..++++.+++... .... +.||++|||||
T Consensus 1 k~~vi~Np~sG~~~~~--~~~v~~~l~~~~~~~~~-------~~t~~~~~~~~~~~~~~-----~~~~~~~ivv~GGDGT 66 (130)
T PF00781_consen 1 KVLVIINPKSGGGRAK--WKKVEPALRAAGIDYEV-------IETESAGHAEALARILA-----LDDYPDVIVVVGGDGT 66 (130)
T ss_dssp SEEEEEETTSTTSHHH--HHHHHHHHHHTTCEEEE-------EEESSTTHHHHHHHHHH-----HTTS-SEEEEEESHHH
T ss_pred CEEEEECCCCCCCchh--HHHHHHHHHHcCCceEE-------EEEeccchHHHHHHHHh-----hccCccEEEEEcCccH
Confidence 5799999999999887 4778887776542 333 35566778888876221 2344 89999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCC
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGW 198 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~ 198 (508)
++++++++.+... ...+|||+||+||||||||+||+
T Consensus 67 l~~vv~~l~~~~~---~~~~~l~iiP~GT~N~~ar~lg~ 102 (130)
T PF00781_consen 67 LNEVVNGLMGSDR---EDKPPLGIIPAGTGNDFARSLGI 102 (130)
T ss_dssp HHHHHHHHCTSTS---SS--EEEEEE-SSS-HHHHHTT-
T ss_pred HHHHHHHHhhcCC---CccceEEEecCCChhHHHHHcCC
Confidence 9999999988632 22679999999999999999999
No 21
>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain is presumed to be the catalytic domain. Bacterial homologues areknown.
Probab=99.82 E-value=6.1e-20 Score=164.48 Aligned_cols=98 Identities=46% Similarity=0.814 Sum_probs=74.5
Q ss_pred EEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhHHHH
Q 010507 84 VVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWV 163 (508)
Q Consensus 84 lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv~~v 163 (508)
+||+||.||++++.+++.++++.+...+++... ++..+++..+++++ ..++.||++|||||+|+|
T Consensus 1 lvi~NP~sG~~~~~~~~~~~~~~l~~~~v~~t~--------~~~~~~~~~~~~~~-------~~~d~vvv~GGDGTi~~v 65 (124)
T smart00046 1 LVFVNPKSGGGKGVKLLRKFRLLLNPAQVFDLT--------KKGPAAALVIFRDL-------PKFDRVLVCGGDGTVGWV 65 (124)
T ss_pred CEEEcCCCCCCccHHHHHHHHHHcCCceEEEEe--------cCChHHHHHHHhhc-------CcCCEEEEEccccHHHHH
Confidence 589999999999998999998888765443221 12344455544432 357899999999999999
Q ss_pred HHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCC
Q 010507 164 LGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGW 198 (508)
Q Consensus 164 l~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~ 198 (508)
+|++.+... ..+.+|||+||+||||||||+|||
T Consensus 66 vn~l~~~~~--~~~~~plgiiP~GTgNdfar~lgi 98 (124)
T smart00046 66 LNALDKREL--PLPEPPVAVLPLGTGNDLARSLGW 98 (124)
T ss_pred HHHHHhccc--ccCCCcEEEeCCCChhHHHHHcCC
Confidence 999987431 112289999999999999999999
No 22
>KOG1115 consensus Ceramide kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.61 E-value=1e-14 Score=150.56 Aligned_cols=314 Identities=15% Similarity=0.090 Sum_probs=194.9
Q ss_pred CCCCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcC
Q 010507 77 QPPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (508)
Q Consensus 77 ~~~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GG 156 (508)
..+.+.++|||||.+|.|+|.++++++..+ |-+..+....++|+..+||.+...++.. ++...+|-||++||
T Consensus 155 ~~RPknllvFinPfgGkG~g~ki~e~V~~~------F~la~v~tkvivTErAnhA~d~~~ei~~--~~~~~yDGiv~VGG 226 (516)
T KOG1115|consen 155 VERPKNLLVFINPFGGKGNGSKIWETVSKI------FILAKVNTKVIVTERANHAFDVMAEIQN--KELHTYDGIVAVGG 226 (516)
T ss_pred hcCCccEEEEEcCCCCCCcccchhhhhhhh------EEeeecceeEEEEccccchhhhhhhCCH--hhhhhcccEEEecC
Confidence 456788999999999999999999996553 4444445556799999999988655532 23467899999999
Q ss_pred chhHHHHHHHHhhccc------CC------CCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccc
Q 010507 157 DGTVGWVLGSVGELNK------QG------REPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFEC 224 (508)
Q Consensus 157 DGTv~~vl~~l~~~~~------~~------~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (508)
||-.||+|+++...-. ++ ..+.+-+||||.|++|-..-+.-
T Consensus 227 DG~FnEiL~G~llrtQ~~ag~~i~~P~~~lv~~~~RfGiIpAGStd~iv~~t~--------------------------- 279 (516)
T KOG1115|consen 227 DGFFNEILNGYLLRTQEVAGFRIEDPDHPLVSERPRFGIIPAGSTDAIVMCTT--------------------------- 279 (516)
T ss_pred chhHHHHHhhhhhhhhhhcCcccCCCCCcccCCCceeeeecCCCcCeEEEEec---------------------------
Confidence 9999999999865321 11 02345699999999998876653
Q ss_pred cccCCCCccchHHHHHHHHHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccceE
Q 010507 225 LIQGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVF 304 (508)
Q Consensus 225 ~~~G~~~p~~~~~av~~il~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~F 304 (508)
|...| +..++. |.-|....+|+-.|.- .+ ..-||-
T Consensus 280 ---gt~D~------~TSAlH-I~lG~~l~vDVctVht-----------------------~~------------kLiRys 314 (516)
T KOG1115|consen 280 ---GTRDP------VTSALH-IILGRKLFVDVCTVHT-----------------------IE------------KLIRYS 314 (516)
T ss_pred ---cCCcc------ccceee-eEeccceeeeeeeeee-----------------------cc------------hheeee
Confidence 22222 223333 3348888888644332 01 123788
Q ss_pred EeEEeeeehHHHhhhhhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccE--------EEEEEeee
Q 010507 305 YNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNIL--------RMHVKKVN 376 (508)
Q Consensus 305 ~Ny~sIG~DA~Va~~f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~i~i~~v~ 376 (508)
.|.+|.||-.+|....++.|. .|...|-+.+++.++.........++-..+..- .+... -+
T Consensus 315 aSa~gYGFyGDvl~dSEKYRW----------mGp~RYDfsglKtflkH~~YegeVsFlpa~sen~~qe~~~~g~~~~-~~ 383 (516)
T KOG1115|consen 315 ASAAGYGFYGDVLSDSEKYRW----------MGPKRYDFSGLKTFLKHRSYEGEVSFLPAESENPCQEPCPSGASLH-TR 383 (516)
T ss_pred hhhhcccccchhhhhhhhhhc----------cCchhhhhHHHHHHHhccccceEEEecccccCCchhccccccCCcc-cC
Confidence 899999999999998887763 388899999999875443211000000000000 00000 00
Q ss_pred cCCceEEEecCcceEEEEecCCCCCccccccCCCCchhhcccCCcccCCCCCcEEEEEeCCh--hHHHHHHHhhh--CC-
Q 010507 377 CSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQG--WHASFVMVELI--SA- 451 (508)
Q Consensus 377 ~~~~e~i~~~~~~~~lvv~N~~~ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~~--~~~~~l~~~l~--~g- 451 (508)
.+.|..+ ......+.++|+++...- .|-|. .|.+.++||-+++++.+.. ++.+..+.... .+
T Consensus 384 ~k~Wq~~--~g~Fl~V~c~aipciC~~-~PrGL----------aP~T~LndGs~dLil~R~~SRF~fi~fl~r~a~~~~q 450 (516)
T KOG1115|consen 384 SKTWQRN--TGRFLKVLCRAIPCICNS-KPRGL----------APSTTLNDGSEDLILCRTKSRFLFIGFLVRSARNERQ 450 (516)
T ss_pred cchhhhh--hhheeeeeEeeccccccC-CCCCc----------CCccccCCCccceeeeecccchHHHHHHHHHhhcccc
Confidence 0123211 223345667777765432 22211 3778999999999999873 44444443322 11
Q ss_pred -----eEEEeeeeEEEEecC---CCcccceEEecCcccCCCCCCCCCeEEEEEEEec
Q 010507 452 -----KHIAQAAAIRLEFRG---GEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPF 500 (508)
Q Consensus 452 -----~~l~qa~~i~I~~~~---~~~~~~~~qiDGE~~~~~~~~~~~~~veI~~~p~ 500 (508)
.....+..+...... +..+.....+|||.+.||. .++|+.=|.
T Consensus 451 fdf~fVe~y~v~~v~~~s~~~d~~~~d~~eWN~DGeile~p~------~lh~rlHpq 501 (516)
T KOG1115|consen 451 FDFLFVEAYLVDGVLHLSLIKDCSRPDYLEWNLDGEILEQPK------PLHFRLHPQ 501 (516)
T ss_pred cCceeeeeeeeeeEEEEeecCCCCCCCcceeccCcchhcCCc------ceEEEechh
Confidence 122345555555433 3345567899999999873 477776553
No 23
>KOG4435 consensus Predicted lipid kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.00 E-value=2.1e-09 Score=111.64 Aligned_cols=109 Identities=23% Similarity=0.192 Sum_probs=81.0
Q ss_pred CCCCCCCCeEEEEEcCCCCCCChhhHHHH-HHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEE
Q 010507 74 NGVQPPEAPMVVFINSRSGGRHGPELKER-LQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIV 152 (508)
Q Consensus 74 ~~~~~~~~~~lviiNp~sg~~~~~~~~~~-l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~iv 152 (508)
..+..+.++++|++||.+..+.....+.+ ...+|.-. .+++.. +.|.+.++|+.|+...+ .+.|+|+
T Consensus 54 vpp~~~~Kkv~V~~Np~ank~~~r~~f~kna~P~lHLa-G~~V~I-----vktd~~gqak~l~e~~~------t~~Dii~ 121 (535)
T KOG4435|consen 54 VPPETRPKKVFVLVNPEANKRGCRDQFNKNALPLLHLA-GVQVDI-----VKTDNQGQAKALAEAVD------TQEDIIY 121 (535)
T ss_pred CCcccccceEEEEechhhccchhhhhhhcccchheeec-cceEEE-----EecCcHHHHHHHHHHhc------cCCCeEE
Confidence 34456778999999999987554333332 22344433 244443 46788999999998764 3559999
Q ss_pred EEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCC
Q 010507 153 VAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGW 198 (508)
Q Consensus 153 v~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~ 198 (508)
|+|||||+++|+.++.... ....|++++|+|--|-...+.-.
T Consensus 122 VaGGDGT~~eVVTGi~Rrr----~~~~pv~~~P~G~~~l~~~s~l~ 163 (535)
T KOG4435|consen 122 VAGGDGTIGEVVTGIFRRR----KAQLPVGFYPGGYDNLWLKSMLP 163 (535)
T ss_pred EecCCCcHHHhhHHHHhcc----cccCceeeccCccchHhhhhhch
Confidence 9999999999999999863 46889999999999877766544
No 24
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=98.15 E-value=1.1e-05 Score=82.19 Aligned_cols=95 Identities=14% Similarity=0.086 Sum_probs=60.5
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHH-ccchhhcccCCccEEEEEcCchh
Q 010507 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAE-LGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 82 ~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~-~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
++.++.|+.. ....++++++.+.|.+++. +.+... .+...+++...+. .+ ...+.+.||++|||||
T Consensus 2 ~v~iv~~~~k--~~~~~~~~~I~~~L~~~g~~v~v~~~-----~~~~~~~~~~~~~~~~-----~~~~~d~vi~iGGDGT 69 (277)
T PRK03708 2 RFGIVARRDK--EEALKLAYRVYDFLKVSGYEVVVDSE-----TYEHLPEFSEEDVLPL-----EEMDVDFIIAIGGDGT 69 (277)
T ss_pred EEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEecc-----hhhhcCcccccccccc-----cccCCCEEEEEeCcHH
Confidence 5778888744 4667788889888876543 222110 0111111111110 11 0135789999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhC
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFG 197 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg 197 (508)
+.++++ +.. ..+|+..||+||. +|...+.
T Consensus 70 lL~a~~-~~~-------~~~pi~gIn~G~l-GFl~~~~ 98 (277)
T PRK03708 70 ILRIEH-KTK-------KDIPILGINMGTL-GFLTEVE 98 (277)
T ss_pred HHHHHH-hcC-------CCCeEEEEeCCCC-CccccCC
Confidence 999999 654 4789999999998 7776654
No 25
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.99 E-value=4e-05 Score=79.16 Aligned_cols=89 Identities=15% Similarity=0.110 Sum_probs=57.3
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHH-HHHHHccchhhcccCCccEEEEEcCc
Q 010507 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACL-EKLAELGDFCAKDTRQKMRIVVAGGD 157 (508)
Q Consensus 79 ~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a-~~la~~~~~~~~~~~~~~~ivv~GGD 157 (508)
.++++++|+|| |.....+..+++.+.|.+.. +++.... +....+. ..+.+. .....+.||++|||
T Consensus 2 ~~kkv~lI~n~--~~~~~~~~~~~i~~~L~~~g-~~v~v~~-----~~~~~~~~~~~~~~------~~~~~d~vi~~GGD 67 (305)
T PRK02645 2 QLKQVIIAYKA--GSSQAKEAAERCAKQLEARG-CKVLMGP-----SGPKDNPYPVFLAS------ASELIDLAIVLGGD 67 (305)
T ss_pred CcCEEEEEEeC--CCHHHHHHHHHHHHHHHHCC-CEEEEec-----Cchhhccccchhhc------cccCcCEEEEECCc
Confidence 46789999999 44455567788888786544 3332211 0011111 111111 12457999999999
Q ss_pred hhHHHHHHHHhhcccCCCCCCCcEEEeeC-CC
Q 010507 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL-GT 188 (508)
Q Consensus 158 GTv~~vl~~l~~~~~~~~~~~~pl~iiPl-GT 188 (508)
||+..+++.+.. ..+|+..|.+ |+
T Consensus 68 GT~l~~~~~~~~-------~~~pv~gin~~G~ 92 (305)
T PRK02645 68 GTVLAAARHLAP-------HDIPILSVNVGGH 92 (305)
T ss_pred HHHHHHHHHhcc-------CCCCEEEEecCCc
Confidence 999999999864 5788999998 65
No 26
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only]
Probab=97.59 E-value=0.00031 Score=72.89 Aligned_cols=39 Identities=46% Similarity=0.478 Sum_probs=34.0
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcch
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDL 192 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ 192 (508)
.+-+.|+.+|||||...|++++. .+.|+-=||.||-|-+
T Consensus 99 ~gVdlIvfaGGDGTarDVa~av~--------~~vPvLGipaGvk~~S 137 (355)
T COG3199 99 RGVDLIVFAGGDGTARDVAEAVG--------ADVPVLGIPAGVKNYS 137 (355)
T ss_pred cCceEEEEeCCCccHHHHHhhcc--------CCCceEeeccccceec
Confidence 47899999999999999999983 4789999999997743
No 27
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.55 E-value=0.00067 Score=69.77 Aligned_cols=98 Identities=14% Similarity=0.125 Sum_probs=56.7
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHH-H--ccchhhcccCCccEEEEEc
Q 010507 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLA-E--LGDFCAKDTRQKMRIVVAG 155 (508)
Q Consensus 79 ~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la-~--~~~~~~~~~~~~~~ivv~G 155 (508)
.++.+.++.|+.. ....++.+++.+.|.++++ ++.... .. +..+. . ..........+.+.||+.|
T Consensus 4 ~~~~i~iv~~~~~--~~~~~~~~~i~~~l~~~g~-~v~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~d~vi~lG 71 (292)
T PRK03378 4 HFKCIGIVGHPRH--PTALTTHEMLYHWLTSKGY-EVIVEQ-------QI--AHELQLKNVKTGTLAEIGQQADLAIVVG 71 (292)
T ss_pred cCCEEEEEEeCCC--HHHHHHHHHHHHHHHHCCC-EEEEec-------ch--hhhcCcccccccchhhcCCCCCEEEEEC
Confidence 3677999999855 3455677888887876543 221110 00 00000 0 0000000123579999999
Q ss_pred CchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCc-chhhhhC
Q 010507 156 GDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGN-DLSRSFG 197 (508)
Q Consensus 156 GDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgN-d~ar~lg 197 (508)
||||+..++..+.. .. +.++|.++|| +|...+.
T Consensus 72 GDGT~L~aa~~~~~-------~~--~Pilgin~G~lGFl~~~~ 105 (292)
T PRK03378 72 GDGNMLGAARVLAR-------YD--IKVIGINRGNLGFLTDLD 105 (292)
T ss_pred CcHHHHHHHHHhcC-------CC--CeEEEEECCCCCcccccC
Confidence 99999999988754 23 3467777777 5555443
No 28
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.22 E-value=0.0035 Score=64.60 Aligned_cols=92 Identities=15% Similarity=0.059 Sum_probs=54.4
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeecccc-ceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPH-EFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~-~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++.+|+|+... ...++.+++++.|.++.+ ++...... ..+ ..++...... . ....+.+.||++||||
T Consensus 4 ~~~v~iv~~~~k~--~a~e~~~~i~~~L~~~gi-ev~v~~~~~~~~---~~~~~~~~~~-~---~~~~~~d~vi~~GGDG 73 (295)
T PRK01231 4 FRNIGLIGRLGSS--SVVETLRRLKDFLLDRGL-EVILDEETAEVL---PGHGLQTVSR-K---LLGEVCDLVIVVGGDG 73 (295)
T ss_pred CCEEEEEecCCCH--HHHHHHHHHHHHHHHCCC-EEEEecchhhhc---Ccccccccch-h---hcccCCCEEEEEeCcH
Confidence 5679999998774 456778888887866542 22211100 000 0000000000 0 0123678999999999
Q ss_pred hHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 159 Tv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
|+..++..+.. ..+||--|.+|+
T Consensus 74 t~l~~~~~~~~-------~~~Pvlgin~G~ 96 (295)
T PRK01231 74 SLLGAARALAR-------HNVPVLGINRGR 96 (295)
T ss_pred HHHHHHHHhcC-------CCCCEEEEeCCc
Confidence 99999988754 467777677774
No 29
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.87 E-value=0.63 Score=47.10 Aligned_cols=41 Identities=12% Similarity=0.195 Sum_probs=30.3
Q ss_pred EeeeeEEEEecCCCcccceEEecCcccCCCCCCCCCeEEEEEEEecccccc
Q 010507 455 AQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMI 505 (508)
Q Consensus 455 ~qa~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~veI~~~p~~~~~~ 505 (508)
.+.++|+|+++ +++.+++|||.... ...|+|+..|.+-.++
T Consensus 194 p~~~~I~I~~~----~~~~l~iDGe~~~~------~~~I~I~~s~~~l~li 234 (256)
T PRK14075 194 PSNEKVTVESQ----RDINLIVDGVLVGK------TNRITVKKSRRYVRIL 234 (256)
T ss_pred CCCCEEEEEEC----CceEEEECCCCcCC------CcEEEEEECCCEEEEE
Confidence 36778999876 68899999998531 2368888888765554
No 30
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=96.70 E-value=0.02 Score=58.89 Aligned_cols=93 Identities=16% Similarity=0.069 Sum_probs=52.5
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
++.+.+|.|+.. ....+..+++.+.|.+... ++..... . ..... +..+-. .. .....+..+.||++|||||
T Consensus 5 ~~~v~iv~~~~~--~~~~e~~~~i~~~L~~~g~-~v~v~~~-~--~~~~~-~~~~~~-~~-~~~~~~~~d~vi~~GGDGt 75 (291)
T PRK02155 5 FKTVALIGRYQT--PGIAEPLESLAAFLAKRGF-EVVFEAD-T--ARNIG-LTGYPA-LT-PEEIGARADLAVVLGGDGT 75 (291)
T ss_pred CCEEEEEecCCC--HHHHHHHHHHHHHHHHCCC-EEEEecc-h--hhhcC-cccccc-cC-hhHhccCCCEEEEECCcHH
Confidence 566888888755 3455677888887766542 2211100 0 00000 000000 00 0000235799999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
+..++..+.. ..+|+--|.+|+
T Consensus 76 ~l~~~~~~~~-------~~~pilGIn~G~ 97 (291)
T PRK02155 76 MLGIGRQLAP-------YGVPLIGINHGR 97 (291)
T ss_pred HHHHHHHhcC-------CCCCEEEEcCCC
Confidence 9999998864 456766677776
No 31
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2.7.1.23 from EC. The enzymes catalyse the phosphorylation of NAD to NADP utilizing ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus.; GO: 0003951 NAD+ kinase activity, 0008152 metabolic process; PDB: 1U0T_B 1U0R_D 1Y3H_A 1Y3I_A 3AFO_B 1YT5_B 2AN1_A 2I2A_A 3V8P_A 2I1W_A ....
Probab=96.67 E-value=0.0071 Score=61.76 Aligned_cols=38 Identities=32% Similarity=0.273 Sum_probs=31.8
Q ss_pred cCCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCC
Q 010507 145 TRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTG 189 (508)
Q Consensus 145 ~~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTg 189 (508)
.++.|.||++|||||+-.++..+.. ..+||--|++||-
T Consensus 74 ~~~~D~ii~lGGDGT~L~~~~~~~~-------~~~Pilgin~G~l 111 (285)
T PF01513_consen 74 EEGVDLIIVLGGDGTFLRAARLFGD-------YDIPILGINTGTL 111 (285)
T ss_dssp CCCSSEEEEEESHHHHHHHHHHCTT-------ST-EEEEEESSSS
T ss_pred ccCCCEEEEECCCHHHHHHHHHhcc-------CCCcEEeecCCCc
Confidence 3678999999999999999988764 4789999999984
No 32
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.66 E-value=0.024 Score=58.35 Aligned_cols=91 Identities=18% Similarity=0.040 Sum_probs=54.3
Q ss_pred CCCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCc
Q 010507 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (508)
Q Consensus 78 ~~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGD 157 (508)
..++++.++.|+.. ...++.+++.+.|.++++ ++.... . .+..+............+.|.||+.|||
T Consensus 8 ~~~~~i~ii~~~~~---~~~~~~~~i~~~l~~~g~-~~~~~~-------~--~~~~~~~~~~~~~~~~~~~Dlvi~iGGD 74 (287)
T PRK14077 8 KNIKKIGLVTRPNV---SLDKEILKLQKILSIYKV-EILLEK-------E--SAEILDLPGYGLDELFKISDFLISLGGD 74 (287)
T ss_pred ccCCEEEEEeCCcH---HHHHHHHHHHHHHHHCCC-EEEEec-------c--hhhhhcccccchhhcccCCCEEEEECCC
Confidence 44778999999863 567788888888876553 221110 0 0111100000000001357899999999
Q ss_pred hhHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 158 GTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 158 GTv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
||+=.++..+.. ..+||--|.+|+
T Consensus 75 GT~L~aa~~~~~-------~~~PilGIN~G~ 98 (287)
T PRK14077 75 GTLISLCRKAAE-------YDKFVLGIHAGH 98 (287)
T ss_pred HHHHHHHHHhcC-------CCCcEEEEeCCC
Confidence 999888877654 356666667776
No 33
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.53 E-value=0.031 Score=58.02 Aligned_cols=92 Identities=16% Similarity=0.207 Sum_probs=54.8
Q ss_pred CCCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHH---cc---------chhhccc
Q 010507 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAE---LG---------DFCAKDT 145 (508)
Q Consensus 78 ~~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~---~~---------~~~~~~~ 145 (508)
.+++++.++.|+.. ....++.+++.+.|.++++ ++..... . +..+.. .. .......
T Consensus 3 ~~~~~I~iv~~~~~--~~~~~~~~~l~~~L~~~g~-~v~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (306)
T PRK03372 3 TASRRVLLVAHTGR--DEATEAARRVAKQLGDAGI-GVRVLDA-------E--AVDLGATHPAPDDFRAMEVVDADPDAA 70 (306)
T ss_pred CCccEEEEEecCCC--HHHHHHHHHHHHHHHHCCC-EEEEeec-------h--hhhhcccccccccccccccccchhhcc
Confidence 45677999988754 3455677888887766543 2211100 0 000100 00 0000001
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
++.+.||+.|||||+-.++..+.. ..+||--|.+|+
T Consensus 71 ~~~D~vi~lGGDGT~L~aar~~~~-------~~~PilGIN~G~ 106 (306)
T PRK03372 71 DGCELVLVLGGDGTILRAAELARA-------ADVPVLGVNLGH 106 (306)
T ss_pred cCCCEEEEEcCCHHHHHHHHHhcc-------CCCcEEEEecCC
Confidence 356899999999999999887754 467777788887
No 34
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.45 E-value=0.026 Score=58.31 Aligned_cols=95 Identities=17% Similarity=0.142 Sum_probs=54.4
Q ss_pred CCCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeecc--ccceee-cchhHHH-HHHHccchhhcccCCccEEE
Q 010507 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVK--PHEFVQ-YGLACLE-KLAELGDFCAKDTRQKMRIV 152 (508)
Q Consensus 78 ~~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~--~~~~~T-~~~~~a~-~la~~~~~~~~~~~~~~~iv 152 (508)
.+++++.+|.|+.. ....++.+++.+.|.+++. +-+.... ++.... ...++.. .. .. .....|.||
T Consensus 3 ~~~~~i~ii~~~~~--~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~D~vi 73 (296)
T PRK04539 3 SPFHNIGIVTRPNT--PDIQDTAHTLITFLKQHGFTVYLDEVGIKEGCIYTQDTVGCHIVNK-TE------LGQYCDLVA 73 (296)
T ss_pred CCCCEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEecccccccchhccccccccccch-hh------cCcCCCEEE
Confidence 35778999999865 3455678888887766553 2121100 000000 0000000 00 00 013568999
Q ss_pred EEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 153 VAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 153 v~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
+.|||||+=.++..+.. ..+||-=|-+|+
T Consensus 74 ~lGGDGT~L~aa~~~~~-------~~~PilGIN~G~ 102 (296)
T PRK04539 74 VLGGDGTFLSVAREIAP-------RAVPIIGINQGH 102 (296)
T ss_pred EECCcHHHHHHHHHhcc-------cCCCEEEEecCC
Confidence 99999999999887754 356766677776
No 35
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.37 E-value=0.048 Score=56.61 Aligned_cols=96 Identities=15% Similarity=0.048 Sum_probs=52.3
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeecc-ccceeecchhH-----HHHHHHccchhhcccCCccEEEE
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVK-PHEFVQYGLAC-----LEKLAELGDFCAKDTRQKMRIVV 153 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~-~~~~~T~~~~~-----a~~la~~~~~~~~~~~~~~~ivv 153 (508)
|+++.++.|+.. ....++.+++.+.|.+++. ++.... ....+. .... ...+.. .. .....++.|.||+
T Consensus 1 m~~igiv~n~~~--~~~~~~~~~l~~~L~~~g~-~v~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~-~~~~~~~~Dlvi~ 74 (305)
T PRK02649 1 MPKAGIIYNDGK--PLAVRTAEELQDKLEAAGW-EVVRASSSGGILG-YANPDQPVCHTGIDQ-LV-PPGFDSSMKFAIV 74 (305)
T ss_pred CCEEEEEEcCCC--HHHHHHHHHHHHHHHHCCC-EEEEecchhhhcC-ccccccccccccccc-cC-hhhcccCcCEEEE
Confidence 567889999744 3456778888888876553 221100 000000 0000 000000 00 0000135689999
Q ss_pred EcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 154 AGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 154 ~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
.|||||+=.++..+.. ..+||--|.+|+
T Consensus 75 iGGDGTlL~aar~~~~-------~~iPilGIN~G~ 102 (305)
T PRK02649 75 LGGDGTVLSAARQLAP-------CGIPLLTINTGH 102 (305)
T ss_pred EeCcHHHHHHHHHhcC-------CCCcEEEEeCCC
Confidence 9999999999887754 456666667775
No 36
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.08 E-value=0.083 Score=54.51 Aligned_cols=88 Identities=16% Similarity=0.148 Sum_probs=50.5
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHH---------ccchhhcccCCccEEE
Q 010507 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAE---------LGDFCAKDTRQKMRIV 152 (508)
Q Consensus 82 ~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~---------~~~~~~~~~~~~~~iv 152 (508)
++.++.|+.. ....++.+++.+.|.++++ ++.... . .+..+.. .........++.+.||
T Consensus 2 ~igii~~~~~--~~~~~~~~~i~~~l~~~g~-~v~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlvi 69 (292)
T PRK01911 2 KIAIFGQTYQ--ESASPYIQELFDELEERGA-EVLIEE-------K--FLDFLKQDLKFHPSYDTFSDNEELDGSADMVI 69 (292)
T ss_pred EEEEEeCCCC--HHHHHHHHHHHHHHHHCCC-EEEEec-------c--hhhhhccccccccccccccchhhcccCCCEEE
Confidence 4778888744 3455677888887766553 221100 0 0011100 0000000013568999
Q ss_pred EEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 153 VAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 153 v~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
+.|||||+=.++..+.. ..+||--|.+|+
T Consensus 70 ~lGGDGT~L~aa~~~~~-------~~~PilGIN~G~ 98 (292)
T PRK01911 70 SIGGDGTFLRTATYVGN-------SNIPILGINTGR 98 (292)
T ss_pred EECCcHHHHHHHHHhcC-------CCCCEEEEecCC
Confidence 99999999988887754 356766677877
No 37
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.05 E-value=0.061 Score=54.75 Aligned_cols=72 Identities=18% Similarity=0.129 Sum_probs=47.5
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
|..+.++.|+.. ...++.+++++.|.+.++ .... . ..+.|.||+.|||||
T Consensus 2 ~~~i~iv~~~~~---~a~~~~~~l~~~l~~~g~-~~~~---------~-----------------~~~~D~vi~lGGDGT 51 (264)
T PRK03501 2 RRNLFFFYKRDK---ELVEKVKPLKKIAEEYGF-TVVD---------H-----------------PKNANIIVSIGGDGT 51 (264)
T ss_pred CcEEEEEECCCH---HHHHHHHHHHHHHHHCCC-EEEc---------C-----------------CCCccEEEEECCcHH
Confidence 446778888766 455778888888876543 2110 0 124589999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC-C
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPL-G 187 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPl-G 187 (508)
+=.++..+... ..+|+--|.+ |
T Consensus 52 ~L~a~~~~~~~------~~~pilgIn~~G 74 (264)
T PRK03501 52 FLQAVRKTGFR------EDCLYAGISTKD 74 (264)
T ss_pred HHHHHHHhccc------CCCeEEeEecCC
Confidence 98888776431 2456544666 5
No 38
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=94.65 E-value=0.15 Score=56.11 Aligned_cols=35 Identities=37% Similarity=0.717 Sum_probs=27.3
Q ss_pred CccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 147 ~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
..|.||+.|||||+=.++..+.. ..+||--|.+|+
T Consensus 262 ~~DlVIsiGGDGTlL~Aar~~~~-------~~iPILGIN~G~ 296 (508)
T PLN02935 262 KVDLVITLGGDGTVLWAASMFKG-------PVPPVVPFSMGS 296 (508)
T ss_pred CCCEEEEECCcHHHHHHHHHhcc-------CCCcEEEEeCCC
Confidence 57999999999999999887754 456665566665
No 39
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=94.36 E-value=0.13 Score=52.22 Aligned_cols=36 Identities=22% Similarity=0.107 Sum_probs=28.5
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
+..|.||+.|||||+=.++..+.. ..+|+--|.+|+
T Consensus 32 ~~~D~vi~iGGDGT~L~a~~~~~~-------~~iPilGIN~G~ 67 (259)
T PRK00561 32 DGADYLFVLGGDGFFVSTAANYNC-------AGCKVVGINTGH 67 (259)
T ss_pred CCCCEEEEECCcHHHHHHHHHhcC-------CCCcEEEEecCC
Confidence 356899999999999988877654 467777788885
No 40
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=93.01 E-value=1.1 Score=50.55 Aligned_cols=90 Identities=18% Similarity=0.183 Sum_probs=52.0
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccch---hhcccCCccEEEEEcC
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDF---CAKDTRQKMRIVVAGG 156 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~---~~~~~~~~~~ivv~GG 156 (508)
.+++.+|.|+.. ....++..++.+.|.+.++ ++.... ..+..+...... ......+.+.||+.||
T Consensus 290 ~~~i~iv~~~~~--~~~~~~~~~i~~~l~~~~~-~v~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dlvi~lGG 357 (569)
T PRK14076 290 PTKFGIVSRIDN--EEAINLALKIIKYLDSKGI-PYELES---------FLYNKLKNRLNEECNLIDDIEEISHIISIGG 357 (569)
T ss_pred CcEEEEEcCCCC--HHHHHHHHHHHHHHHHCCC-EEEEec---------hhhhhhcccccccccccccccCCCEEEEECC
Confidence 345788888743 4556677888887766543 221100 001111100000 0001235689999999
Q ss_pred chhHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 157 DGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
|||+=.++..+.. ..+||--|.+|+
T Consensus 358 DGT~L~aa~~~~~-------~~~PilGin~G~ 382 (569)
T PRK14076 358 DGTVLRASKLVNG-------EEIPIICINMGT 382 (569)
T ss_pred cHHHHHHHHHhcC-------CCCCEEEEcCCC
Confidence 9999999887754 467777688887
No 41
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=92.89 E-value=1 Score=45.96 Aligned_cols=70 Identities=13% Similarity=0.160 Sum_probs=46.1
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhHH
Q 010507 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVG 161 (508)
Q Consensus 82 ~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv~ 161 (508)
++.++.|+ ..+..++.+++++.|...++ ++. .++.|.||+.|||||+=
T Consensus 2 ~i~Ii~~~---~~~~~~~~~~l~~~l~~~g~-~~~----------------------------~~~~Dlvi~iGGDGT~L 49 (265)
T PRK04885 2 KVAIISNG---DPKSKRVASKLKKYLKDFGF-ILD----------------------------EKNPDIVISVGGDGTLL 49 (265)
T ss_pred EEEEEeCC---CHHHHHHHHHHHHHHHHcCC-ccC----------------------------CcCCCEEEEECCcHHHH
Confidence 36677773 34556778888887765432 110 12468999999999999
Q ss_pred HHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 162 WVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 162 ~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
..+..+... ...+|+--|.+|+
T Consensus 50 ~a~~~~~~~-----~~~iPilGIN~G~ 71 (265)
T PRK04885 50 SAFHRYENQ-----LDKVRFVGVHTGH 71 (265)
T ss_pred HHHHHhccc-----CCCCeEEEEeCCC
Confidence 888777542 1356766677775
No 42
>PLN02727 NAD kinase
Probab=91.70 E-value=0.59 Score=54.81 Aligned_cols=92 Identities=13% Similarity=0.118 Sum_probs=53.4
Q ss_pred CCCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHH--cc----c----hhhcccCC
Q 010507 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAE--LG----D----FCAKDTRQ 147 (508)
Q Consensus 78 ~~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~--~~----~----~~~~~~~~ 147 (508)
.+++.+++|.++.. ...+...+|.+.|..+..+++... .. .+..+.. .. . ........
T Consensus 676 ~p~rtVgIV~K~~~---ea~~~~~eL~~~L~~~~gi~V~VE-------~~--~a~~l~~~~~~~~~~~~~~~~~~el~~~ 743 (986)
T PLN02727 676 STPKTVLLLKKLGQ---ELMEEAKEVASFLYHQEKMNVLVE-------PD--VHDIFARIPGFGFVQTFYSQDTSDLHER 743 (986)
T ss_pred CCCCEEEEEcCCcH---HHHHHHHHHHHHHHhCCCeEEEEe-------cc--hHHHhhccccccccceecccchhhcccC
Confidence 46788999999876 344556667777765412222210 00 1111100 00 0 00000135
Q ss_pred ccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 148 KMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 148 ~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
.|.||+.|||||+=.++..+.. ..+||--|.+|+
T Consensus 744 ~DLVIvLGGDGTlLrAar~~~~-------~~iPILGINlGr 777 (986)
T PLN02727 744 VDFVACLGGDGVILHASNLFRG-------AVPPVVSFNLGS 777 (986)
T ss_pred CCEEEEECCcHHHHHHHHHhcC-------CCCCEEEEeCCC
Confidence 6999999999999999888754 467777788884
No 43
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=90.98 E-value=0.43 Score=48.19 Aligned_cols=36 Identities=28% Similarity=0.250 Sum_probs=28.6
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
++.+.||+.|||||+=.++..... ..+||--|.+|+
T Consensus 24 ~~~Dlvi~iGGDGTlL~a~~~~~~-------~~~PvlGIN~G~ 59 (246)
T PRK04761 24 EEADVIVALGGDGFMLQTLHRYMN-------SGKPVYGMNRGS 59 (246)
T ss_pred ccCCEEEEECCCHHHHHHHHHhcC-------CCCeEEEEeCCC
Confidence 567999999999999988877654 456766677775
No 44
>COG0061 nadF NAD kinase [Coenzyme metabolism]
Probab=90.74 E-value=3.7 Score=42.03 Aligned_cols=36 Identities=36% Similarity=0.354 Sum_probs=29.1
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
+..+.|++.|||||+-.++..+.. ..+|+-=|-+|+
T Consensus 54 ~~~d~ivvlGGDGtlL~~~~~~~~-------~~~pilgin~G~ 89 (281)
T COG0061 54 EKADLIVVLGGDGTLLRAARLLAR-------LDIPVLGINLGH 89 (281)
T ss_pred cCceEEEEeCCcHHHHHHHHHhcc-------CCCCEEEEeCCC
Confidence 578999999999999999988765 356777777774
No 45
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=90.65 E-value=1.1 Score=46.01 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=27.3
Q ss_pred CccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 147 ~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
+.+.||+.|||||+=.++..+.. ..+||--|.+|+
T Consensus 42 ~~d~vi~iGGDGT~L~aa~~~~~-------~~~PilgIn~G~ 76 (272)
T PRK02231 42 RAQLAIVIGGDGNMLGRARVLAK-------YDIPLIGINRGN 76 (272)
T ss_pred CCCEEEEECCcHHHHHHHHHhcc-------CCCcEEEEeCCC
Confidence 57999999999999988877754 356655567777
No 46
>PLN02929 NADH kinase
Probab=90.26 E-value=1.1 Score=46.52 Aligned_cols=35 Identities=26% Similarity=0.256 Sum_probs=26.8
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
...|.||+.|||||+=.++..+ . ..+||-=|-.|+
T Consensus 63 ~~~Dlvi~lGGDGT~L~aa~~~-~-------~~iPvlGIN~Gp 97 (301)
T PLN02929 63 RDVDLVVAVGGDGTLLQASHFL-D-------DSIPVLGVNSDP 97 (301)
T ss_pred CCCCEEEEECCcHHHHHHHHHc-C-------CCCcEEEEECCC
Confidence 4679999999999999888776 4 345655577774
No 47
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=89.94 E-value=2.7 Score=42.99 Aligned_cols=43 Identities=16% Similarity=0.245 Sum_probs=26.0
Q ss_pred eeeeEEEEecCCCcccceEEecCccc-CCCCCCCCCeEEEEEEEeccccc
Q 010507 456 QAAAIRLEFRGGEWKDAFMQMDGEPW-KQPLNRDYSTFVEIKRVPFQSLM 504 (508)
Q Consensus 456 qa~~i~I~~~~~~~~~~~~qiDGE~~-~~~~~~~~~~~veI~~~p~~~~~ 504 (508)
....|+|+... .++..+.+||+.. ...+ .-.|+|+.-+..-.+
T Consensus 207 ~~~~I~i~~~~--~~~~~l~~DG~~~~~l~~----~d~i~i~~s~~~~~~ 250 (271)
T PRK01185 207 SESTVEIKIAG--DQSSLLILDGQYEYKISK----GDTVEISKSENYARF 250 (271)
T ss_pred CCCEEEEEEcC--CCCEEEEECCCceEecCC----CCEEEEEECCCeeEE
Confidence 34577777653 3578899999964 2221 234777776655433
No 48
>PF10254 Pacs-1: PACS-1 cytosolic sorting protein; InterPro: IPR019381 PACS-1 is a cytosolic sorting protein that directs the localisation of membrane proteins in the trans-Golgi network (TGN)/endosomal system. PACS-1 connects the clathrin adaptor AP-1 to acidic cluster sorting motifs contained in the cytoplasmic domain of cargo proteins such as furin, the cation-independent mannose-6-phosphate receptor and in viral proteins such as human immunodeficiency virus type 1 Nef [].
Probab=80.90 E-value=4.4 Score=43.88 Aligned_cols=51 Identities=25% Similarity=0.356 Sum_probs=39.1
Q ss_pred CccEEEEEcCchhHHHHHHHHhhcccCCC---CCCCcEEEeeCCCCcchhhhhCC
Q 010507 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGR---EPVPPVAIIPLGTGNDLSRSFGW 198 (508)
Q Consensus 147 ~~~~ivv~GGDGTv~~vl~~l~~~~~~~~---~~~~pl~iiPlGTgNd~ar~lg~ 198 (508)
....|+|+|||-=++.||...++.-.... ..-.-+-+||+|+ |.+||.||-
T Consensus 75 ~~vKV~v~G~~~y~~~VLr~yVE~Ls~K~~dWl~~~rFlvIPlGs-~~varyLgs 128 (414)
T PF10254_consen 75 PPVKVAVAGGQSYLSAVLRAYVEQLSHKPPDWLNYLRFLVIPLGS-HPVARYLGS 128 (414)
T ss_pred CceEEEEEccHHHHHHHHHHHHHHhccCCcccccceeEEEecCCC-CHHHHHHhc
Confidence 46789999999999999999877421100 1223489999999 999999986
No 49
>KOG4180 consensus Predicted kinase [General function prediction only]
Probab=74.22 E-value=3.5 Score=43.20 Aligned_cols=32 Identities=25% Similarity=0.405 Sum_probs=23.6
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEE
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAI 183 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~i 183 (508)
...|.||-+|||||+=....-+.. ...|.||+
T Consensus 104 ~waD~VisvGGDGTfL~Aasrv~~------~~~PViGv 135 (395)
T KOG4180|consen 104 RWADMVISVGGDGTFLLAASRVID------DSKPVIGV 135 (395)
T ss_pred chhhEEEEecCccceeehhhhhhc------cCCceeee
Confidence 467899999999999877765554 24555665
No 50
>cd08186 Fe-ADH8 Iron-containing alcohol dehydrogenase. Type III Iron-containing alcohol dehydrogenases (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. The ADH of hyperthermophilic archaeon Thermococcus hydrothermalis oxidizes a series of primary aliphatic and aromatic alcohols preferentially from C2 to C8 but is also active towards methanol and glycerol and stereospecific for monoterpenes. It was suggested that the type III ADHs in microorganisms are involved in acetaldehyde detoxication rather than in alcohol turnover.
Probab=73.06 E-value=17 Score=38.75 Aligned_cols=105 Identities=18% Similarity=0.276 Sum_probs=54.9
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EE-EeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~-l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+..+.+-...| .++++.+.|.+..+ +. .....|.. ......++++.+. ..+.|.||++|| |
T Consensus 27 kr~livtd~~~~~~~g--~~~~v~~~L~~~gi~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIaiGG-G 94 (383)
T cd08186 27 SKVLLVTGKSAYKKSG--AWDKVEPALDEHGIEYVLYNKVTPNP----TVDQVDEAAKLGR-----EFGAQAVIAIGG-G 94 (383)
T ss_pred CEEEEEcCccHHhhcC--hHHHHHHHHHHcCCeEEEeCCCCCCC----CHHHHHHHHHHHH-----HcCCCEEEEeCC-c
Confidence 5788887666543222 45666666665432 21 11222221 1223334433321 246789999998 6
Q ss_pred hHHHHHHHHhhcc---c----------CCCCCCCcEEEeeC--CCCcchhhhhC
Q 010507 159 TVGWVLGSVGELN---K----------QGREPVPPVAIIPL--GTGNDLSRSFG 197 (508)
Q Consensus 159 Tv~~vl~~l~~~~---~----------~~~~~~~pl~iiPl--GTgNd~ar~lg 197 (508)
++..+...+.-.- . ......+|+..||. |||-..++.--
T Consensus 95 S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTTagTGSE~t~~av 148 (383)
T cd08186 95 SPIDSAKSAAILLEHPGKTARDLYEFKFTPEKALPLIAINLTHGTGTEVDRFAV 148 (383)
T ss_pred cHHHHHHHHHHHHhCCCCcHHHHhCCCcccCCCCCEEEEeCCChhhhhhCCeEE
Confidence 6666655543210 0 00123578999997 88876655443
No 51
>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes neomycin, kanamycin, gentamicin, and ribostamycin. They are important antibacterial agents. DOIS is a homologue of the dehydroquinate synthase which catalyzes the cyclization of 3-deoxy-D-arabino-heputulosonate-7-phosphate to dehydroquinate (DHQ) in the shikimate pathway.
Probab=71.04 E-value=13 Score=39.29 Aligned_cols=96 Identities=22% Similarity=0.242 Sum_probs=52.5
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EE---EeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcC
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD---LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~---l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GG 156 (508)
++++++..+..- ....+.+.+.|..... +. +....+. ......+++++.+.+. ..+..+.||++||
T Consensus 24 ~rvlvVtd~~v~----~~~~~~l~~~L~~~g~~~~~~~~~~~e~~----k~~~~v~~~~~~~~~~--~~dr~~~IIAvGG 93 (355)
T cd08197 24 DKYLLVTDSNVE----DLYGHRLLEYLREAGAPVELLSVPSGEEH----KTLSTLSDLVERALAL--GATRRSVIVALGG 93 (355)
T ss_pred CeEEEEECccHH----HHHHHHHHHHHHhcCCceEEEEeCCCCCC----CCHHHHHHHHHHHHHc--CCCCCcEEEEECC
Confidence 577888875432 2255667777765432 22 2111111 1223344444433211 1233457888876
Q ss_pred chhHHHHHHHHhhcccCCCCCCCcEEEeeC--CCCcc
Q 010507 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPL--GTGND 191 (508)
Q Consensus 157 DGTv~~vl~~l~~~~~~~~~~~~pl~iiPl--GTgNd 191 (508)
|++..+...+.... ...+|+..||. |++.|
T Consensus 94 -Gsv~D~ak~~A~~~----~rgip~I~IPTTlla~~d 125 (355)
T cd08197 94 -GVVGNIAGLLAALL----FRGIRLVHIPTTLLAQSD 125 (355)
T ss_pred -cHHHHHHHHHHHHh----ccCCCEEEecCccccccc
Confidence 88888887765432 14679999998 66766
No 52
>cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway . In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=69.07 E-value=26 Score=36.67 Aligned_cols=94 Identities=17% Similarity=0.196 Sum_probs=52.8
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
++++|+.=+.+ ...+.+++.+.|....+ +......+.. ......++++.+ + ..+.|.||++|| |+
T Consensus 23 ~r~livt~~~~----~~~~~~~v~~~L~~~~i~~~~~~~~~~p----~~~~v~~~~~~~----~-~~~~D~IIavGG-GS 88 (351)
T cd08170 23 KRALIIADEFV----LDLVGAKIEESLAAAGIDARFEVFGGEC----TRAEIERLAEIA----R-DNGADVVIGIGG-GK 88 (351)
T ss_pred CeEEEEECHHH----HHHHHHHHHHHHHhCCCeEEEEEeCCcC----CHHHHHHHHHHH----h-hcCCCEEEEecC-ch
Confidence 56676653222 22466777887876543 2122222221 112333443332 1 247789999998 77
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC--CCCcchhh
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLSR 194 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPl--GTgNd~ar 194 (508)
+..+...+.-. ..+|+..||. |||--.+.
T Consensus 89 ~iD~aK~ia~~------~~~P~iaIPTTagTgse~t~ 119 (351)
T cd08170 89 TLDTAKAVADY------LGAPVVIVPTIASTDAPTSA 119 (351)
T ss_pred hhHHHHHHHHH------cCCCEEEeCCccccCccccc
Confidence 77777776543 3578999997 66654444
No 53
>cd08169 DHQ-like Dehydroquinate synthase-like which includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. Dehydroquinate synthase-like. This group contains dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. They exhibit the dehydroquinate synthase structural fold. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes ne
Probab=68.77 E-value=20 Score=37.69 Aligned_cols=98 Identities=16% Similarity=0.146 Sum_probs=54.0
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcc-cCe--EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCc
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGK-EQV--FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~-~~v--~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGD 157 (508)
++++++..+..-. ...+++.+.|.. ..+ +.+....+. ......+++.+.+.+. .....+.||++||
T Consensus 24 ~k~livtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~~e~~----k~~~~v~~~~~~~~~~--~~~r~d~IIaiGG- 92 (344)
T cd08169 24 DQYFFISDSGVAD----LIAHYIAEYLSKILPVHILVIEGGEEY----KTFETVTRILERAIAL--GANRRTAIVAVGG- 92 (344)
T ss_pred CeEEEEECccHHH----HHHHHHHHHHHhhcCceEEEeCCCCCC----CCHHHHHHHHHHHHHc--CCCCCcEEEEECC-
Confidence 5778887654432 355666666654 222 222222111 1234444544433211 1235788888887
Q ss_pred hhHHHHHHHHhhcccCCCCCCCcEEEeeC--CCCcchh
Q 010507 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLS 193 (508)
Q Consensus 158 GTv~~vl~~l~~~~~~~~~~~~pl~iiPl--GTgNd~a 193 (508)
|++..+...+.... ...+|+-.||. ++++|-+
T Consensus 93 Gsv~D~ak~vA~~~----~rgip~i~VPTTlla~~ds~ 126 (344)
T cd08169 93 GATGDVAGFVASTL----FRGIAFIRVPTTLLAQSDSG 126 (344)
T ss_pred cHHHHHHHHHHHHh----ccCCcEEEecCCcccccccC
Confidence 78888877765432 14679999997 5666643
No 54
>cd08171 GlyDH-like2 Glycerol dehydrogenase-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=67.44 E-value=28 Score=36.45 Aligned_cols=89 Identities=15% Similarity=0.168 Sum_probs=51.3
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-E-EEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~-~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++++..+.+- ....+++.+.|++..+ + ......++. .....+++++.+ + ..+.|.||++|| |
T Consensus 23 ~r~liv~d~~~~----~~~~~~v~~~l~~~~~~~~~~~~~~~~p----~~~~v~~~~~~~----~-~~~~d~iiavGG-G 88 (345)
T cd08171 23 KKVVVIGGKTAL----AAAKDKIKAALEQSGIEITDFIWYGGES----TYENVERLKKNP----A-VQEADMIFAVGG-G 88 (345)
T ss_pred CEEEEEeCHHHH----HHHHHHHHHHHHHCCCeEEEEEecCCCC----CHHHHHHHHHHH----h-hcCCCEEEEeCC-c
Confidence 577777654433 2346777777866543 2 122222221 122233333322 1 247799999998 7
Q ss_pred hHHHHHHHHhhcccCCCCCCCcEEEeeC--CCC
Q 010507 159 TVGWVLGSVGELNKQGREPVPPVAIIPL--GTG 189 (508)
Q Consensus 159 Tv~~vl~~l~~~~~~~~~~~~pl~iiPl--GTg 189 (508)
++..+...+.-. ..+|+..||. |||
T Consensus 89 s~~D~aK~ia~~------~~~p~i~VPTt~gtg 115 (345)
T cd08171 89 KAIDTVKVLADK------LGKPVFTFPTIASNC 115 (345)
T ss_pred HHHHHHHHHHHH------cCCCEEEecCccccC
Confidence 888888777553 3578899997 444
No 55
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=67.36 E-value=29 Score=32.64 Aligned_cols=70 Identities=14% Similarity=0.182 Sum_probs=43.6
Q ss_pred CCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhHHHHHHHHhh
Q 010507 92 GGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGE 169 (508)
Q Consensus 92 g~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv~~vl~~l~~ 169 (508)
|+..-....++....|.+.++ |++.....|. .+....++.+++. ...-.-.|.++|+++-+--|+.++..
T Consensus 8 gs~SD~~~~~~a~~~L~~~gi~~~~~V~saHR----~p~~l~~~~~~~~----~~~~~viIa~AG~~a~Lpgvva~~t~ 78 (150)
T PF00731_consen 8 GSTSDLPIAEEAAKTLEEFGIPYEVRVASAHR----TPERLLEFVKEYE----ARGADVIIAVAGMSAALPGVVASLTT 78 (150)
T ss_dssp SSGGGHHHHHHHHHHHHHTT-EEEEEE--TTT----SHHHHHHHHHHTT----TTTESEEEEEEESS--HHHHHHHHSS
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEEEeccC----CHHHHHHHHHHhc----cCCCEEEEEECCCcccchhhheeccC
Confidence 444445567777888887776 8888776664 4555666665542 11224678889999999999988853
No 56
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.
Probab=67.33 E-value=32 Score=36.44 Aligned_cols=100 Identities=18% Similarity=0.216 Sum_probs=51.2
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EE-EeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~-l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+..+.+-. . ...+++.+.|.+..+ +. +....+.. .....+++++.+. ..+.|.||++|| |
T Consensus 24 ~r~livt~~~~~~-~--g~~~~v~~~L~~~gi~~~~~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIaiGG-G 90 (375)
T cd08194 24 KRPLIVTDKVMVK-L--GLVDKLTDSLKKEGIESAIFDDVVSEP----TDESVEEGVKLAK-----EGGCDVIIALGG-G 90 (375)
T ss_pred CeEEEEcCcchhh-c--chHHHHHHHHHHCCCeEEEECCCCCCc----CHHHHHHHHHHHH-----hcCCCEEEEeCC-c
Confidence 5778887655432 1 245667777765543 22 22222222 1222333333321 247799999998 5
Q ss_pred hHHHHHHHHhh---ccc---------CCCCCCCcEEEeeC--CCCcchh
Q 010507 159 TVGWVLGSVGE---LNK---------QGREPVPPVAIIPL--GTGNDLS 193 (508)
Q Consensus 159 Tv~~vl~~l~~---~~~---------~~~~~~~pl~iiPl--GTgNd~a 193 (508)
++..+...+.- .+. ......+|+..||. |||--..
T Consensus 91 S~~D~AKaia~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTtagtGsE~t 139 (375)
T cd08194 91 SPIDTAKAIAVLATNGGSIRDYKGPRIVDKPGLPLIAIPTTAGTGSEVT 139 (375)
T ss_pred hHHHHHHHHHHHHhCCCCHHHHhCcccccCCCCCEEEECCCCccccccC
Confidence 66665554431 000 00124578999996 5654443
No 57
>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD). 1,3-propanediol dehydrogenase-like (PPD). This family is a member of the iron-containing alcohol dehydrogenase superfamily, and exhibits a dehydroquinate synthase-like fold. Protein sequence similarity search and other biochemical evidences suggest that they are close to the iron-containing 1,3-propanediol dehydrogenase (EC 1.1.1.202). 1,3-propanediol dehydrogenase catalyzes the oxidation of propane-1,3-diol to 3-hydroxypropanal with the simultaneous reduction of NADP+ to NADPH. The protein structure of Thermotoga maritima TM0920 gene contains one NADP+ and one iron ion.
Probab=64.88 E-value=32 Score=36.25 Aligned_cols=103 Identities=17% Similarity=0.293 Sum_probs=54.1
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EE-EeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~-l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+.-+.+-...| ..+++.+.|....+ +. .....|.. ......++++.+. ..+.|.||++|| |
T Consensus 26 ~r~lvVt~~~~~~~~g--~~~~v~~~L~~~g~~~~~~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-G 93 (357)
T cd08181 26 KRALIVTGKSSAKKNG--SLDDVTKALEELGIEYEIFDEVEENP----SLETIMEAVEIAK-----KFNADFVIGIGG-G 93 (357)
T ss_pred CEEEEEeCCchHhhcC--cHHHHHHHHHHcCCeEEEeCCCCCCc----CHHHHHHHHHHHH-----hcCCCEEEEeCC-c
Confidence 5788887666533222 34556666654432 22 11222222 1222333433321 246799999998 6
Q ss_pred hHHHHHHHHhhcc-----------cCCCCCCCcEEEeeC--CCCcchhhh
Q 010507 159 TVGWVLGSVGELN-----------KQGREPVPPVAIIPL--GTGNDLSRS 195 (508)
Q Consensus 159 Tv~~vl~~l~~~~-----------~~~~~~~~pl~iiPl--GTgNd~ar~ 195 (508)
++..+...+.-.- .......+|+..||. |||-..++.
T Consensus 94 SviD~aK~ia~~~~~~~~~~~~~~~~~~~~~~P~i~VPTtagTGsE~t~~ 143 (357)
T cd08181 94 SPLDAAKAIAVLIKNPDLKVELYFRSKYLKALPVVAIPTTAGTGSEVTQY 143 (357)
T ss_pred hHHHHHHHHHHHHhCCCcHHHHhcccccCCCCCEEEEeCCCcchhhhCCe
Confidence 6666665443100 000124578999997 787777663
No 58
>KOG2178 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=62.94 E-value=3.8 Score=43.88 Aligned_cols=36 Identities=36% Similarity=0.538 Sum_probs=27.9
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
+..|.||..||||||=....-..+ ..|||--.-+||
T Consensus 167 ~~~D~iItLGGDGTvL~aS~LFq~-------~VPPV~sFslGs 202 (409)
T KOG2178|consen 167 NRFDLIITLGGDGTVLYASSLFQR-------SVPPVLSFSLGS 202 (409)
T ss_pred cceeEEEEecCCccEEEehhhhcC-------CCCCeEEeecCC
Confidence 467899999999999777544433 689988888875
No 59
>cd08187 BDH Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction was 50-fold lower than that in the forward direction. The NADH-BDH had higher activity with longer chained aldehydes and was inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases.
Probab=62.88 E-value=34 Score=36.41 Aligned_cols=104 Identities=20% Similarity=0.259 Sum_probs=52.6
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-E-EEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~-~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+.-+.+.... .+.+++.+.|....+ + ......++. ......+.++.+ + ..+.|.||++|| |
T Consensus 29 ~r~livt~~~~~~~~--~~~~~v~~~L~~~g~~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIaiGG-G 96 (382)
T cd08187 29 KKVLLVYGGGSIKKN--GLYDRVIASLKEAGIEVVELGGVEPNP----RLETVREGIELC----K-EEKVDFILAVGG-G 96 (382)
T ss_pred CEEEEEeCCcHHHhc--CcHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHH----H-HcCCCEEEEeCC-h
Confidence 577777665554322 245667777765432 2 222222222 112223333222 1 247799999998 5
Q ss_pred hHHHHHHHHhhcc------------cCCCCCCCcEEEeeC--CCCcchhhhh
Q 010507 159 TVGWVLGSVGELN------------KQGREPVPPVAIIPL--GTGNDLSRSF 196 (508)
Q Consensus 159 Tv~~vl~~l~~~~------------~~~~~~~~pl~iiPl--GTgNd~ar~l 196 (508)
++..+...+.-.. .......+|+-.||. |||--..+.-
T Consensus 97 S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTTagTGsE~t~~a 148 (382)
T cd08187 97 SVIDSAKAIAAGAPYDGDVWDFFTGKAKIEKALPVGTVLTLAATGSEMNGGA 148 (382)
T ss_pred HHHHHHHHHHhHhhCCCCHHHHhcccCCCCCCCCEEEEeCCCchhhccCCCE
Confidence 6666555442210 000124578999996 6765544433
No 60
>cd08172 GlyDH-like1 Glycerol dehydrogenases-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=62.87 E-value=43 Score=35.09 Aligned_cols=92 Identities=21% Similarity=0.174 Sum_probs=54.7
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
++++|+..+.+ ...+.+++.+.|....+ ...... .+ ......+++++.+. ..+.|.||++|| |++
T Consensus 24 ~~~liv~d~~~----~~~~~~~l~~~L~~~~~-~~~~~~-~~---p~~~~v~~~~~~~~-----~~~~D~iIavGG-Gs~ 88 (347)
T cd08172 24 KRPLIVTGPRS----WAAAKPYLPESLAAGEA-FVLRYD-GE---CSEENIERLAAQAK-----ENGADVIIGIGG-GKV 88 (347)
T ss_pred CeEEEEECHHH----HHHHHHHHHHHHhcCeE-EEEEeC-CC---CCHHHHHHHHHHHH-----hcCCCEEEEeCC-cHH
Confidence 57888887665 23466777777743322 211110 01 12333444444332 246789999988 888
Q ss_pred HHHHHHHhhcccCCCCCCCcEEEeeC--CCCcchh
Q 010507 161 GWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLS 193 (508)
Q Consensus 161 ~~vl~~l~~~~~~~~~~~~pl~iiPl--GTgNd~a 193 (508)
..+...+... ..+|+..||. |||-..+
T Consensus 89 ~D~aK~ia~~------~~~p~i~VPTT~gtgse~t 117 (347)
T cd08172 89 LDTAKAVADR------LGVPVITVPTLAATCAAWT 117 (347)
T ss_pred HHHHHHHHHH------hCCCEEEecCccccCcccc
Confidence 8888887653 3578999996 6665555
No 61
>cd07766 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH). Dehydroquinate synthase-like. This superfamily divides into two subgroups: the dehydroquinate synthase-like, and a large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. Dehydroquinate synthase-like group includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. The alcohol dehydrogenases in this superfamily contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alc
Probab=61.89 E-value=28 Score=35.92 Aligned_cols=93 Identities=16% Similarity=0.213 Sum_probs=52.3
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccc-CeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKE-QVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~-~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
++++++..+..-. ...+++.+.|.+. .+.......|+. .....+++++.+. ..+.+.||++|| |+
T Consensus 24 ~~~liv~~~~~~~----~~~~~v~~~l~~~~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIaiGG-Gs 89 (332)
T cd07766 24 DRALVVSDEGVVK----GVGEKVADSLKKLIAVHIFDGVGPNP----TFEEVKEAVERAR-----AAEVDAVIAVGG-GS 89 (332)
T ss_pred CeEEEEeCCchhh----hHHHHHHHHHHhcCcEEEeCCcCCCc----CHHHHHHHHHHHH-----hcCcCEEEEeCC-ch
Confidence 5778887655533 3556666666543 221111222211 2333444444332 246788998887 78
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeCCCCcc
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGND 191 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd 191 (508)
+..+...+.... ...+|+..||.=.|.+
T Consensus 90 ~~D~aK~ia~~~----~~~~p~i~iPTt~~tg 117 (332)
T cd07766 90 TLDTAKAVAALL----NRGLPIIIVPTTAATG 117 (332)
T ss_pred HHHHHHHHHHHh----cCCCCEEEEeCCCchh
Confidence 888887775532 1368999999744443
No 62
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=60.09 E-value=39 Score=32.01 Aligned_cols=76 Identities=16% Similarity=0.224 Sum_probs=51.2
Q ss_pred hhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhHHHHHHHHhhcccCCC
Q 010507 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGR 175 (508)
Q Consensus 97 ~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~ 175 (508)
....++....|...++ ||+.....|. .+....++++++.+ ..-...|.++|+.+-+--|+.++.
T Consensus 11 ~~~~~~a~~~L~~~gi~~dv~V~SaHR----tp~~~~~~~~~a~~----~g~~viIa~AG~aa~Lpgvva~~t------- 75 (156)
T TIGR01162 11 LPTMKKAADILEEFGIPYELRVVSAHR----TPELMLEYAKEAEE----RGIKVIIAGAGGAAHLPGMVAALT------- 75 (156)
T ss_pred HHHHHHHHHHHHHcCCCeEEEEECccc----CHHHHHHHHHHHHH----CCCeEEEEeCCccchhHHHHHhcc-------
Confidence 4456677777777766 8998877765 46677777766431 123456777888998888887763
Q ss_pred CCCCcEEEeeCCCC
Q 010507 176 EPVPPVAIIPLGTG 189 (508)
Q Consensus 176 ~~~~pl~iiPlGTg 189 (508)
..|+--+|.-++
T Consensus 76 --~~PVIgvP~~~~ 87 (156)
T TIGR01162 76 --PLPVIGVPVPSK 87 (156)
T ss_pred --CCCEEEecCCcc
Confidence 456666676554
No 63
>PRK00002 aroB 3-dehydroquinate synthase; Reviewed
Probab=59.38 E-value=32 Score=36.29 Aligned_cols=97 Identities=15% Similarity=0.152 Sum_probs=53.5
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EE---EeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcC
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD---LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~---l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GG 156 (508)
++++++..+.... ...+++.+.|....+ +. +....+.. ......++.+.+.+. ...+.+.||++||
T Consensus 32 ~~~livtd~~~~~----~~~~~v~~~L~~~gi~~~~~~~~~~e~~~----~~~~v~~~~~~~~~~--~~~r~d~IIavGG 101 (358)
T PRK00002 32 KKVAIVTDETVAP----LYLEKLRASLEAAGFEVDVVVLPDGEQYK----SLETLEKIYDALLEA--GLDRSDTLIALGG 101 (358)
T ss_pred CeEEEEECCchHH----HHHHHHHHHHHhcCCceEEEEeCCCCCCC----CHHHHHHHHHHHHHc--CCCCCCEEEEEcC
Confidence 5788888655522 366777777765432 22 22221111 223344444332210 1234588888887
Q ss_pred chhHHHHHHHHhhcccCCCCCCCcEEEeeC--CCCcch
Q 010507 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDL 192 (508)
Q Consensus 157 DGTv~~vl~~l~~~~~~~~~~~~pl~iiPl--GTgNd~ 192 (508)
|++..+...+.... ...+|+..||. ++.+|-
T Consensus 102 -Gsv~D~aK~iA~~~----~~gip~i~IPTT~~s~~ds 134 (358)
T PRK00002 102 -GVIGDLAGFAAATY----MRGIRFIQVPTTLLAQVDS 134 (358)
T ss_pred -cHHHHHHHHHHHHh----cCCCCEEEcCchhhhcccc
Confidence 78888887765322 24678999997 444443
No 64
>TIGR03405 Phn_Fe-ADH phosphonate metabolism-associated iron-containing alcohol dehydrogenase. 2-hydroxyethylphosphonate (2-HEP), the presumed product of the reaction of Pald with an alcohol dehydrogenase, is a biologically novel but reasonable analog of 2-AEP and may be a constituent of as-yet undescribed natural products. In the case of Azoarcus, downstream of the dehydrogenase is a CDP-glycerol:glycerophosphate transferase homolog that may indicate the existence of a pathway for 2-HEP-derived phosphonolipid biosynthesis.
Probab=59.38 E-value=65 Score=33.98 Aligned_cols=104 Identities=22% Similarity=0.241 Sum_probs=53.1
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
++++|+..+.... ..+.+++.+.|....++.+....|.. .....++.++.+. +.....|.||++|| |++
T Consensus 24 ~r~lvVtd~~~~~---~g~~~~v~~~L~~~~~~~~~~v~~~p----t~~~v~~~~~~~~---~~~~~~D~IIaiGG-GSv 92 (355)
T TIGR03405 24 RRVVVVTFPEARA---LGLARRLEALLGGRLAALIDDVAPNP----DVAQLDGLYARLW---GDEGACDLVIALGG-GSV 92 (355)
T ss_pred CeEEEEECcchhh---cchHHHHHHHhccCcEEEeCCCCCCc----CHHHHHHHHHHHH---hcCCCCCEEEEeCC-ccH
Confidence 5778887654321 13556677777543332222333322 1233333333321 10123789999998 666
Q ss_pred HHHHHHHhhc---cc-------------CCCCCCCcEEEeeC--CCCcchhhh
Q 010507 161 GWVLGSVGEL---NK-------------QGREPVPPVAIIPL--GTGNDLSRS 195 (508)
Q Consensus 161 ~~vl~~l~~~---~~-------------~~~~~~~pl~iiPl--GTgNd~ar~ 195 (508)
..+...+.-. +. ......+|+..||. |||-..++.
T Consensus 93 iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~P~IaVPTTagTGSE~t~~ 145 (355)
T TIGR03405 93 IDTAKVLAVGLRRGEFDLLLQLLRNGRDFAPTARLPLVAIPTTAGTGSEVTPW 145 (355)
T ss_pred HHHHHHHHHHHhCCCcccHHHHHhcCCccCCCCCCCEEEEcCCCcchhhhcCe
Confidence 6655443221 10 00124578999997 787666554
No 65
>cd08173 Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme. Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH, EC 1.1.1.261) plays an important role in the formation of the enantiomeric configuration of the glycerophosphate backbone (sn-glycerol-1-phosphate) of archaeal ether lipids. It catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme. The activity is zinc-dependent. One characteristic feature of archaea is that their cellular membrane has an ether linkage between the glycerol backbone and the hydrocarbon residues. The polar lipids of the members of Archaea consist of di- and tetraethers of glycerol with isoprenoid alcohols bound at the sn-2 and sn-3 positions of the glycerol moiety. The archaeal polar lipids have the enantiomeric configuration of a glycerophosph
Probab=58.81 E-value=56 Score=34.10 Aligned_cols=90 Identities=16% Similarity=0.166 Sum_probs=53.5
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
++++++..+.... ...+++.+.|.+...+.+. ..|.. .....+++.+++. ..+.+.||++|| |++
T Consensus 26 ~~~liv~d~~~~~----~~~~~v~~~l~~~~~~~~~-~~~~~----~~~~v~~~~~~~~-----~~~~d~iIaiGG-Gs~ 90 (339)
T cd08173 26 GRVLVVTGPTTKS----IAGKKVEALLEDEGEVDVV-IVEDA----TYEEVEKVESSAR-----DIGADFVIGVGG-GRV 90 (339)
T ss_pred CeEEEEECCchHH----HHHHHHHHHHHhcCCeEEE-EeCCC----CHHHHHHHHHHhh-----hcCCCEEEEeCC-chH
Confidence 5778887655432 3567777777654311111 11211 2334445544432 246789999987 888
Q ss_pred HHHHHHHhhcccCCCCCCCcEEEeeCCCCcc
Q 010507 161 GWVLGSVGELNKQGREPVPPVAIIPLGTGND 191 (508)
Q Consensus 161 ~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd 191 (508)
..+...+.-. ..+|+..||.=.++|
T Consensus 91 ~D~aK~~a~~------~~~p~i~iPTT~~t~ 115 (339)
T cd08173 91 IDVAKVAAYK------LGIPFISVPTAASHD 115 (339)
T ss_pred HHHHHHHHHh------cCCCEEEecCcccCC
Confidence 8888887643 467899999755443
No 66
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like. Large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. They contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alcohol dehydrogenases which contains different protein domains. There are several distinct families of alcohol dehydrogenases: Zinc-containing long-chain alcohol dehydrogenases; insect-type, or short-chain alcohol dehydrogenases; iron-containing alcohol dehydrogenases, and others. The iron-containing family has a Rossmann fold-like topology that resembles the fold of the zinc-dependent alcohol dehydrogenases, but lacks sequence homology, and differs in strand arrangement. ADH catalyzes the reversible oxidation of alcohol to acetaldehyde with the simultaneous reduction of NAD(P)+ to NAD(P)H.
Probab=58.55 E-value=44 Score=35.17 Aligned_cols=101 Identities=15% Similarity=0.256 Sum_probs=51.3
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EE-EeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~-l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+.-+.+-. ....+++.+.|.+..+ +. +....++. ......++++++. ..+.+.||++|| |
T Consensus 24 ~~~lvv~~~~~~~---~~~~~~v~~~L~~~~~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IiaiGG-G 90 (370)
T cd08551 24 RKALIVTDPGLVK---TGVLDKVIDSLKEAGIEVVIFDGVEPNP----TLSNVDAAVAAYR-----EEGCDGVIAVGG-G 90 (370)
T ss_pred CeEEEEeCcchhh---CccHHHHHHHHHHcCCeEEEECCCCCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-c
Confidence 5778887765543 1245566666655432 21 11222221 1233344444321 246789999998 5
Q ss_pred hHHHHHHHHhhccc------------CCCCCCCcEEEeeC--CCCcchhh
Q 010507 159 TVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDLSR 194 (508)
Q Consensus 159 Tv~~vl~~l~~~~~------------~~~~~~~pl~iiPl--GTgNd~ar 194 (508)
++..+...+.-... .......|+..||. |||--.++
T Consensus 91 s~~D~AK~va~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTt~gtgse~t~ 140 (370)
T cd08551 91 SVLDTAKAIALLATNPGDIWDYEGGKPVIKPALPLIAIPTTAGTGSEVTP 140 (370)
T ss_pred hHHHHHHHHHHHHhCCCcHHHHhCcccccCCCCCEEEecCCCcchhhcCC
Confidence 66665555432110 00023578999997 66643333
No 67
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=58.52 E-value=54 Score=34.81 Aligned_cols=106 Identities=18% Similarity=0.201 Sum_probs=55.2
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EE-EeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~-l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+.-+.+-.. ..+.+++.+.|.+..+ +. .....|.. .....++.++.+ + ..+.|.||++|| |
T Consensus 26 ~r~livt~~~~~~~--~g~~~~v~~~L~~~~~~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IiavGG-G 93 (380)
T cd08185 26 KKALIVTGNGSSKK--TGYLDRVIELLKQAGVEVVVFDKVEPNP----TTTTVMEGAALA----R-EEGCDFVVGLGG-G 93 (380)
T ss_pred CeEEEEeCCCchhh--ccHHHHHHHHHHHcCCeEEEeCCccCCC----CHHHHHHHHHHH----H-HcCCCEEEEeCC-c
Confidence 67888887665211 2356677777765432 21 22233222 122233333332 1 246799999998 5
Q ss_pred hHHHHHHHHhhcc---c--------------CCCCCCCcEEEeeC--CCCcchhhhhCC
Q 010507 159 TVGWVLGSVGELN---K--------------QGREPVPPVAIIPL--GTGNDLSRSFGW 198 (508)
Q Consensus 159 Tv~~vl~~l~~~~---~--------------~~~~~~~pl~iiPl--GTgNd~ar~lg~ 198 (508)
++..+...+.-.- . ......+|+..||. |||--.++.--+
T Consensus 94 S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTtagTGSE~t~~avi 152 (380)
T cd08185 94 SSMDTAKAIAFMAANEGDYWDYIFGGTGKGKPPPEKALPIIAITTTAGTGSEADPWAVI 152 (380)
T ss_pred cHHHHHHHHHHHhhCCCCHHHHhcccccccccCCCCCCCEEEEcCCChhhhccCCeEEE
Confidence 5555554442210 0 00123578999996 777665554433
No 68
>cd08195 DHQS Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway, which involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds, is found in bacteria, microbial eukaryotes, and plants, but not in mammals. Therefore, enzymes of this pathway are attractive targets for the development of non-toxic antimicrobial compounds, herbicides and anti-parasitic agents. The activity of DHQS requires nicotinamide adenine dinucleotide (NAD) as cofactor. A single active site in DHQS catalyzes five sequential reactions involving alcohol oxidation, phosphate elimination, carbonyl reduction, ring opening, and intramolecular aldol
Probab=57.20 E-value=35 Score=35.75 Aligned_cols=94 Identities=20% Similarity=0.210 Sum_probs=50.8
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
++++++..+..-. ...+++.+.|..... +.+......+ ........+++.+.+.+. .....+.||++|| |+
T Consensus 25 ~~~livtd~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~~e-~~~~~~~v~~~~~~~~~~--~~~r~d~IIaiGG-Gs 96 (345)
T cd08195 25 SKILIVTDENVAP----LYLEKLKAALEAAGFEVEVIVIPAGE-ASKSLETLEKLYDALLEA--GLDRKSLIIALGG-GV 96 (345)
T ss_pred CeEEEEECCchHH----HHHHHHHHHHHhcCCceEEEEeCCCC-CcCCHHHHHHHHHHHHHc--CCCCCCeEEEECC-hH
Confidence 5788888766543 356677777765431 2211111111 011233444444433210 1234578888887 78
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
+..+...+.... ...+|+..||.
T Consensus 97 v~D~ak~vA~~~----~rgip~i~VPT 119 (345)
T cd08195 97 VGDLAGFVAATY----MRGIDFIQIPT 119 (345)
T ss_pred HHhHHHHHHHHH----hcCCCeEEcch
Confidence 888877765322 14678999996
No 69
>cd08179 NADPH_BDH NADPH-dependent butanol dehydrogenase involved in the butanol and ethanol formation pathway in bacteria. NADPH-dependent butanol dehydrogenase (BDH) is involved in the butanol and ethanol formation pathway of some bacteria. The fermentation process is characterized by an acid producing growth phase, followed by a solvent producing phase. The latter phase is associated with the induction of solventogenic enzymes such as butanol dehydrogenase. The activity of the enzymes require NADPH as cofactor, as well as divalent ions zinc or iron. This family is a member of the iron-containing alcohol dehydrogenase superfamily. Protein structure has a dehydroquinate synthase-like fold.
Probab=56.17 E-value=49 Score=35.07 Aligned_cols=102 Identities=15% Similarity=0.186 Sum_probs=48.6
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-E-EEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~-~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+.-+.+-... ...+++.+.|.+..+ + .+....|.. .....++.++.+ + ..+.|.||++|| |
T Consensus 24 ~r~livt~~~~~~~~--g~~~~v~~~L~~~g~~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIavGG-G 91 (375)
T cd08179 24 KKAFIVTGGGSMKKF--GFLDKVEAYLKEAGIEVEVFEGVEPDP----SVETVLKGAEAM----R-EFEPDWIIALGG-G 91 (375)
T ss_pred CeEEEEeCchHHHhC--ChHHHHHHHHHHcCCeEEEeCCCCCCc----CHHHHHHHHHHH----H-hcCCCEEEEeCC-c
Confidence 567777654432211 245666676665432 1 112222222 122233333322 1 246789999998 4
Q ss_pred hHHHHHHHHh---hccc------------CCCCCCCcEEEeeC--CCCcchhh
Q 010507 159 TVGWVLGSVG---ELNK------------QGREPVPPVAIIPL--GTGNDLSR 194 (508)
Q Consensus 159 Tv~~vl~~l~---~~~~------------~~~~~~~pl~iiPl--GTgNd~ar 194 (508)
++..+.-.+. ..+. ......+|+..||. |||--..+
T Consensus 92 SviD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~p~iaIPTtagTGSE~t~ 144 (375)
T cd08179 92 SPIDAAKAMWIFYEYPELTFEDIVKPFTLPELRNKARFCAIPSTSGTATEVTA 144 (375)
T ss_pred cHHHHHHHHHHHHhCCCcCHHHHhccccccccCCCCCEEEeCCCCchhHhhCC
Confidence 4444444432 1100 00023468999997 77754443
No 70
>cd08177 MAR Maleylacetate reductase is involved in many aromatic compounds degradation pathways of aerobic microbes. Maleylacetate reductases (MAR) play an important role in the degradation of aromatic compounds in aerobic microbes. In fungi and yeasts, the enzymes are involved in the catabolism of compounds such as phenol, tyrosine, benzoate, 4-hydroxybenzoate and resorcinol. In bacteria, the enzymes contribute to the degradation of resorcinol, 2,4-dihydroxybenzoate ([beta]-resorcylate) and 2,6-dihydroxybenzoate ([gamma]-resorcylate) via hydroxyquinol and maleylacetate. Maleylacetate reductases catalyze NADH- or NADPH-dependent reduction, at the carbon-carbon double bond, of maleylacetate or 2-chloromaleylacetate to 3-oxoadipate. In the case of 2-chloromaleylacetate, Maleylacetate reductases initially catalyses the NAD(P)H-dependent dechlorination to maleylacetate, which is then reduced to 3-oxoadipate. This enzyme is a homodimer. It is inhibited by thiol-blocking reagents such as p-
Probab=56.05 E-value=51 Score=34.44 Aligned_cols=86 Identities=17% Similarity=0.214 Sum_probs=48.2
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
++++|+..+. -.....+++.+.|.+..+.......+.. .....+++++.+ + ..+.+.||++|| |++
T Consensus 24 ~~~livt~~~----~~~~~~~~v~~~l~~~~~~~~~~~~~~p----~~~~v~~~~~~~----~-~~~~d~IIaiGG-Gs~ 89 (337)
T cd08177 24 SRALVLTTPS----LATKLAERVASALGDRVAGTFDGAVMHT----PVEVTEAAVAAA----R-EAGADGIVAIGG-GST 89 (337)
T ss_pred CeEEEEcChH----HHHHHHHHHHHHhccCCcEEeCCCCCCC----CHHHHHHHHHHH----H-hcCCCEEEEeCC-cHH
Confidence 4667765432 2222667788888765321122222221 122233333322 1 246789999988 888
Q ss_pred HHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 161 GWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 161 ~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
..+...+.-. ..+|+..||.
T Consensus 90 iD~aK~ia~~------~~~p~i~IPT 109 (337)
T cd08177 90 IDLAKAIALR------TGLPIIAIPT 109 (337)
T ss_pred HHHHHHHHHH------hcCCEEEEcC
Confidence 8888777643 3578888885
No 71
>PRK09423 gldA glycerol dehydrogenase; Provisional
Probab=55.08 E-value=79 Score=33.41 Aligned_cols=93 Identities=14% Similarity=0.143 Sum_probs=53.1
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
++++|+.-+.+- ....+++.+.|....+ +......+.. .....+++++.+ + ..+.+.||++|| |+
T Consensus 30 ~~~livtd~~~~----~~~~~~v~~~l~~~~~~~~~~~~~~ep----~~~~v~~~~~~~----~-~~~~d~IIavGG-Gs 95 (366)
T PRK09423 30 KRALVIADEFVL----GIVGDRVEASLKEAGLTVVFEVFNGEC----SDNEIDRLVAIA----E-ENGCDVVIGIGG-GK 95 (366)
T ss_pred CEEEEEEChhHH----HHHHHHHHHHHHhCCCeEEEEEeCCCC----CHHHHHHHHHHH----H-hcCCCEEEEecC-hH
Confidence 577777644332 2366778877876542 2111222222 122333444332 1 246799999998 77
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC--CCCcchh
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLS 193 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPl--GTgNd~a 193 (508)
+..+...+.-. ..+|+..||. |||-..+
T Consensus 96 v~D~aK~iA~~------~~~p~i~IPTtagtgSe~t 125 (366)
T PRK09423 96 TLDTAKAVADY------LGVPVVIVPTIASTDAPTS 125 (366)
T ss_pred HHHHHHHHHHH------cCCCEEEeCCccccCcccc
Confidence 88887777643 3578999997 4444333
No 72
>cd08180 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism. 1,3-propanediol dehydrogenase (PPD) plays a role in glycerol metabolism of some bacteria in anaerobic conditions. In this degradation pathway, glycerol is converted in a two-step process to 1,3-propanediol (1,3-PD) which is then excreted into the extracellular medium. The first reaction involves the transformation of glycerol into 3-hydroxypropionaldehyde (3-HPA) by a coenzyme B-12-dependent dehydratase. The second reaction involves the dismutation of the 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol by the NADH-linked 1,3-propanediol dehydrogenase (PPD). The enzyme require iron ion for its function. Because many genes in this pathway are present in the pdu (propanediol utilisation) operon, they are also named pdu genes. PPD is a member of the iron-containing alcohol dehydrogenase superfamily. The PPD structure has a dehydroquinat
Probab=53.57 E-value=56 Score=34.02 Aligned_cols=100 Identities=16% Similarity=0.221 Sum_probs=48.7
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccc-CeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKE-QVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~-~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
++++|+..+..-.. .+.+++.+.|.+. .+.......+.. .....++.++.+. ..+.|.||++|| |+
T Consensus 23 ~~~lvv~~~~~~~~---g~~~~v~~~l~~~~~~~~~~~v~~~p----~~~~v~~~~~~~~-----~~~~d~IiaiGG-Gs 89 (332)
T cd08180 23 KRVLIVTDPFMVKS---GMLDKVTDHLDSSIEVEIFSDVVPDP----PIEVVAKGIKKFL-----DFKPDIVIALGG-GS 89 (332)
T ss_pred CeEEEEeCchhhhC---ccHHHHHHHHHhcCcEEEeCCCCCCc----CHHHHHHHHHHHH-----hcCCCEEEEECC-ch
Confidence 57788886543321 1445555656542 111111222221 1222333333321 246799999999 55
Q ss_pred HHHHHHHHhhccc-CCCCCCCcEEEeeC--CCCcchh
Q 010507 160 VGWVLGSVGELNK-QGREPVPPVAIIPL--GTGNDLS 193 (508)
Q Consensus 160 v~~vl~~l~~~~~-~~~~~~~pl~iiPl--GTgNd~a 193 (508)
+..+...+.-... ....+.+|+..||. |||--.+
T Consensus 90 ~~D~aKa~a~~~~~~~~~~~~p~i~VPTtagtgse~t 126 (332)
T cd08180 90 AIDAAKAIIYFAKKLGKKKKPLFIAIPTTSGTGSEVT 126 (332)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCEEEeCCCCcchHhhC
Confidence 5555554321100 00124579999996 6665443
No 73
>COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion]
Probab=53.44 E-value=34 Score=36.33 Aligned_cols=80 Identities=16% Similarity=0.238 Sum_probs=53.7
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcC--
Q 010507 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG-- 156 (508)
Q Consensus 79 ~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GG-- 156 (508)
..+++++.+--.|=.+.| +.+++.+.|+..+++++..+.|-..++. ..-+.+++++ ++.+.|+++||
T Consensus 28 ~~~kVLi~YGGGSIKrnG--vydqV~~~Lkg~~~~E~~GVEPNP~~~T-v~kaV~i~ke--------e~idflLAVGGGS 96 (384)
T COG1979 28 KDAKVLIVYGGGSIKKNG--VYDQVVEALKGIEVIEFGGVEPNPRLET-LMKAVEICKE--------ENIDFLLAVGGGS 96 (384)
T ss_pred ccCeEEEEecCccccccc--hHHHHHHHhcCceEEEecCCCCCchHHH-HHHHHHHHHH--------cCceEEEEecCcc
Confidence 347899998655544444 7788888888777789988888764432 3334444442 67899999998
Q ss_pred --chhHHHHHHHHhh
Q 010507 157 --DGTVGWVLGSVGE 169 (508)
Q Consensus 157 --DGTv~~vl~~l~~ 169 (508)
|||=--.+.+..+
T Consensus 97 ViD~tK~IAa~a~y~ 111 (384)
T COG1979 97 VIDGTKFIAAAAKYD 111 (384)
T ss_pred hhhhHHHHHhhcccC
Confidence 7876555544433
No 74
>cd08192 Fe-ADH7 Iron-containing alcohol dehydrogenases-like, involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. NAD-dependent iron-containing alcohol dehydrogenase-like. Proteins in this family are NAD-dependent alcohol dehydrogenases which are involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. They catalyze the oxidation of beta-hydroxy CoA ester to beta-oxo CoA ester, which then be subject to CoA-dependent thiolysis to yield acetyl-CoA and 6-C8-SPC-CoA. The major laundry surfactant in worldwide use is commercial linear alkylbenzenesulfonate (LAS) which contains 20 congeners of linear alkanes (C10 to C13). LAS is fully biodegradable in oxic environments. Degradation involves microbial communities. Parvibaculum lavamentivorans DS-1T is a representative member of many heterotrophic, LAS-degrading communities, in which it catalyzes the first steps of LAS degradation. Strain DS-1T is a small heterotrophic bacterium able to omega-oxygenate the comm
Probab=52.67 E-value=79 Score=33.37 Aligned_cols=74 Identities=16% Similarity=0.158 Sum_probs=37.1
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EE-EeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~-l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+.-+..-. ....+++.+.|.+.++ +. +....++. .....++.++.+ + ..+.+.||++|| |
T Consensus 25 ~~~liv~~~~~~~---~~~~~~v~~~L~~~g~~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~d~IIaiGG-G 91 (370)
T cd08192 25 KRPLIVTDPGLAA---LGLVARVLALLEDAGLAAALFDEVPPNP----TEAAVEAGLAAY----R-AGGCDGVIAFGG-G 91 (370)
T ss_pred CeEEEEcCcchhh---CccHHHHHHHHHHcCCeEEEeCCCCCCC----CHHHHHHHHHHH----H-hcCCCEEEEeCC-c
Confidence 4677776544321 1245667777765432 21 22222222 112233333332 1 257799999998 6
Q ss_pred hHHHHHHHH
Q 010507 159 TVGWVLGSV 167 (508)
Q Consensus 159 Tv~~vl~~l 167 (508)
++..+...+
T Consensus 92 SviD~aK~i 100 (370)
T cd08192 92 SALDLAKAV 100 (370)
T ss_pred hHHHHHHHH
Confidence 666665554
No 75
>TIGR01357 aroB 3-dehydroquinate synthase. This model represents 3-dehydroquinate synthase, the enzyme catalyzing the second of seven steps in the shikimate pathway of chorismate biosynthesis. Chorismate is the last common intermediate in the biosynthesis of all three aromatic amino acids.
Probab=52.08 E-value=52 Score=34.39 Aligned_cols=91 Identities=15% Similarity=0.189 Sum_probs=50.0
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-E---EEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcC
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F---DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~---~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GG 156 (508)
++++++.++..- ....+++.+.|.+..+ + .+....+.. .....+++++.+.+. .....+.||++||
T Consensus 21 ~~~livtd~~~~----~~~~~~v~~~L~~~g~~~~~~~~~~~e~~~----~~~~v~~~~~~~~~~--~~~r~d~IIavGG 90 (344)
T TIGR01357 21 SKLVIITDETVA----DLYADKLLEALQALGYNVLKLTVPDGEESK----SLETVQRLYDQLLEA--GLDRSSTIIALGG 90 (344)
T ss_pred CeEEEEECCchH----HHHHHHHHHHHHhcCCceeEEEeCCCCCCC----CHHHHHHHHHHHHHc--CCCCCCEEEEEcC
Confidence 678888765443 2356777777765432 2 222111111 223344444433210 1234588888887
Q ss_pred chhHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 157 DGTv~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
|++..+...+.... ...+|+..||.
T Consensus 91 -Gsv~D~aK~iA~~~----~~~~p~i~VPT 115 (344)
T TIGR01357 91 -GVVGDLAGFVAATY----MRGIRFIQVPT 115 (344)
T ss_pred -hHHHHHHHHHHHHH----ccCCCEEEecC
Confidence 77777777665321 14678999997
No 76
>PF13685 Fe-ADH_2: Iron-containing alcohol dehydrogenase; PDB: 3CE9_C.
Probab=51.20 E-value=46 Score=33.70 Aligned_cols=93 Identities=16% Similarity=0.165 Sum_probs=49.7
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
++++++.-+. ......+++++.|...+ +++...... ..+-......++..++. ..+.+.||++|| ||+
T Consensus 20 ~~~lvv~d~~----t~~~~g~~v~~~l~~~g-~~v~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~d~ii~vGg-G~i 87 (250)
T PF13685_consen 20 KKVLVVTDEN----TYKAAGEKVEESLKSAG-IEVAVIEEF-VGDADEDEVEKLVEALR-----PKDADLIIGVGG-GTI 87 (250)
T ss_dssp SEEEEEEETT----HHHHHHHHHHHHHHTTT--EEEEEE-E-E---BHHHHHHHHTTS-------TT--EEEEEES-HHH
T ss_pred CcEEEEEcCC----HHHHHHHHHHHHHHHcC-CeEEEEecC-CCCCCHHHHHHHHHHhc-----ccCCCEEEEeCC-cHH
Confidence 5777776544 33345566777776653 333221100 00112333444444331 246778888887 999
Q ss_pred HHHHHHHhhcccCCCCCCCcEEEeeCCCCcc
Q 010507 161 GWVLGSVGELNKQGREPVPPVAIIPLGTGND 191 (508)
Q Consensus 161 ~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd 191 (508)
+.+.--+... ...|+..+|.=-.||
T Consensus 88 ~D~~K~~A~~------~~~p~isVPTa~S~D 112 (250)
T PF13685_consen 88 IDIAKYAAFE------LGIPFISVPTAASHD 112 (250)
T ss_dssp HHHHHHHHHH------HT--EEEEES--SSG
T ss_pred HHHHHHHHHh------cCCCEEEeccccccc
Confidence 9999888763 578999999887777
No 77
>PRK15138 aldehyde reductase; Provisional
Probab=51.03 E-value=73 Score=34.10 Aligned_cols=104 Identities=13% Similarity=0.193 Sum_probs=49.5
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
++++|+.-+.+=. ...+.+++.+.|....+.......|.. .....++.++.+ + ..+.|.||++|| |.+
T Consensus 30 ~~~livt~~~~~~--~~g~~~~v~~~L~~~~~~~f~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIaiGG-GS~ 97 (387)
T PRK15138 30 ARVLITYGGGSVK--KTGVLDQVLDALKGMDVLEFGGIEPNP----TYETLMKAVKLV----R-EEKITFLLAVGG-GSV 97 (387)
T ss_pred CeEEEECCCchHH--hcCcHHHHHHHhcCCeEEEECCccCCC----CHHHHHHHHHHH----H-HcCCCEEEEeCC-hHH
Confidence 5666665433321 122456677777532222222233322 122333333332 1 247799999999 333
Q ss_pred HHHHHHHh---hcc------------cCCCCCCCcEEEeeC--CCCcchhhhh
Q 010507 161 GWVLGSVG---ELN------------KQGREPVPPVAIIPL--GTGNDLSRSF 196 (508)
Q Consensus 161 ~~vl~~l~---~~~------------~~~~~~~~pl~iiPl--GTgNd~ar~l 196 (508)
-.+...+. ..+ .....+.+|+..||. |||-......
T Consensus 98 iD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~P~iaVPTTaGTGSE~t~~a 150 (387)
T PRK15138 98 LDGTKFIAAAANYPENIDPWHILETGGKEIKSAIPMGSVLTLPATGSESNAGA 150 (387)
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHhccCCCcCCCCCEEEEecCCccccccCCCE
Confidence 33333321 100 000123468999997 8876555443
No 78
>PLN00180 NDF6 (NDH-dependent flow 6); Provisional
Probab=50.14 E-value=3.6 Score=38.62 Aligned_cols=15 Identities=47% Similarity=0.740 Sum_probs=11.8
Q ss_pred EEEcCchhHHHHHHH
Q 010507 152 VVAGGDGTVGWVLGS 166 (508)
Q Consensus 152 vv~GGDGTv~~vl~~ 166 (508)
=-.|||||+||+-..
T Consensus 129 RgdGGDGT~hW~Yd~ 143 (180)
T PLN00180 129 RGDGGDGTGHWVYER 143 (180)
T ss_pred cccCCCCceeeEeeh
Confidence 346999999999643
No 79
>PRK09860 putative alcohol dehydrogenase; Provisional
Probab=48.79 E-value=89 Score=33.36 Aligned_cols=105 Identities=11% Similarity=0.130 Sum_probs=52.3
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-E-EEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~-~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+.-+.. ....+.+++.+.|++..+ + -...+.|.. .....++.++.+ + ..+.|.||++||--
T Consensus 32 ~~~livt~~~~---~~~g~~~~v~~~L~~~~i~~~~f~~v~~np----~~~~v~~~~~~~----~-~~~~D~IiaiGGGS 99 (383)
T PRK09860 32 TRTLIVTDNML---TKLGMAGDVQKALEERNIFSVIYDGTQPNP----TTENVAAGLKLL----K-ENNCDSVISLGGGS 99 (383)
T ss_pred CEEEEEcCcch---hhCccHHHHHHHHHHcCCeEEEeCCCCCCc----CHHHHHHHHHHH----H-HcCCCEEEEeCCch
Confidence 56666654311 112256677777776543 1 222333322 122233333322 2 25789999999843
Q ss_pred hHHHHHHHHh---hccc---------CCCCCCCcEEEeeC--CCCcchhhhhCC
Q 010507 159 TVGWVLGSVG---ELNK---------QGREPVPPVAIIPL--GTGNDLSRSFGW 198 (508)
Q Consensus 159 Tv~~vl~~l~---~~~~---------~~~~~~~pl~iiPl--GTgNd~ar~lg~ 198 (508)
+-.+.-.+. ..+. ......+|+..||. |||-...+.--+
T Consensus 100 -~iD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~p~iaIPTTagTGSE~t~~avi 152 (383)
T PRK09860 100 -PHDCAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCII 152 (383)
T ss_pred -HHHHHHHHHHHHHCCCCHHHHhCcCccCCCCCCEEEEeCCCcchhccCceEEE
Confidence 333333322 1100 00124578999997 888766655444
No 80
>cd08550 GlyDH-like Glycerol_dehydrogenase-like. Families of proteins related to glycerol dehydrogenases. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site. Some subfamilies have not been characterized till now.
Probab=48.53 E-value=82 Score=33.00 Aligned_cols=93 Identities=16% Similarity=0.130 Sum_probs=52.6
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
++++|+..+.+-. ...+++.+.|....+ ++.....+.. ......++++.+. ..+.|.||++|| |+
T Consensus 23 ~~~liv~~~~~~~----~~~~~v~~~l~~~~i~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG-Gs 88 (349)
T cd08550 23 SKVAVVGGKTVLK----KSRPRFEAALAKSIIVVDVIVFGGEC----STEEVVKALCGAE-----EQEADVIIGVGG-GK 88 (349)
T ss_pred CeEEEEEChHHHH----HHHHHHHHHHHhcCCeeEEEEcCCCC----CHHHHHHHHHHHH-----hcCCCEEEEecC-cH
Confidence 4667776554432 345677777766442 2222111111 1223334433322 246789999988 78
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC--CCCcchh
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLS 193 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPl--GTgNd~a 193 (508)
+..+...+... ...|+..||. |||-..+
T Consensus 89 ~~D~aK~ia~~------~~~p~i~VPTtagtgse~t 118 (349)
T cd08550 89 TLDTAKAVADR------LDKPIVIVPTIASTCAASS 118 (349)
T ss_pred HHHHHHHHHHH------cCCCEEEeCCccccCcccc
Confidence 88888777653 3578999997 5554443
No 81
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=47.84 E-value=6.1 Score=35.17 Aligned_cols=34 Identities=18% Similarity=0.079 Sum_probs=28.1
Q ss_pred hheehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
..|+..+..|..+ |||..|..|+-.++.+||...
T Consensus 69 ~~i~~~~~~~~~VlVHC~~G~~RS~~v~~~yl~~~ 103 (138)
T smart00195 69 EFIEDAEKKGGKVLVHCQAGVSRSATLIIAYLMKY 103 (138)
T ss_pred HHHHHHhcCCCeEEEECCCCCchHHHHHHHHHHHH
Confidence 3455667778888 899999999999999998764
No 82
>cd08176 LPO Lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. Lactadehyde:propanediol oxidoreductase (LPO) is a member of the group III iron-activated dehydrogenases which catalyze the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. L-Fucose and L-rhamnose is used by Escherichia coli through an inducible pathway mediated by the fucose regulon comprising four linked oeprons fucO, fucA, fucPIK, and fucR. The fucA-encoded aldolase catalyzes the formation of dihydroxyacetone phosphate and L-lactaldehyde. Under anaerobic conditions, with NADH as a cofactor, lactaldehyde is converted by a fucO-encoded Lactadehyde:propanediol oxidoreductase (LPO) to L-1,2-propanediol, which is excreted as a fermentation product. In mutant strains, E. coli adapted to grow on L-1,2-propanediol, FucO catalyzes the oxidation of the polyol to
Probab=46.88 E-value=60 Score=34.43 Aligned_cols=105 Identities=13% Similarity=0.256 Sum_probs=53.0
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EE-EeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~-l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+..+..-. ....+++.+.|....+ +. +....++. .....+++++.+. ..+.|.||++|| |
T Consensus 29 ~~~lvv~~~~~~~---~~~~~~v~~~L~~~~~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-G 95 (377)
T cd08176 29 KKALIVTDKGLVK---IGVVEKVTDVLDEAGIDYVIYDGVKPNP----TITNVKDGLAVFK-----KEGCDFIISIGG-G 95 (377)
T ss_pred CeEEEECCchHhh---cCcHHHHHHHHHHcCCeEEEeCCCCCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-c
Confidence 4677776544422 1245666777765432 21 22222221 1222334433321 247799999998 5
Q ss_pred hHHHHHHHHhhc---c---------cCCCCCCCcEEEeeC--CCCcchhhhhCC
Q 010507 159 TVGWVLGSVGEL---N---------KQGREPVPPVAIIPL--GTGNDLSRSFGW 198 (508)
Q Consensus 159 Tv~~vl~~l~~~---~---------~~~~~~~~pl~iiPl--GTgNd~ar~lg~ 198 (508)
++..+.-.+.-. + .......+|+..||. |||-...+.--+
T Consensus 96 S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTtagTgSe~t~~avi 149 (377)
T cd08176 96 SPHDCAKAIGIVATNGGDIRDYEGVAKSKKPAVPIVAINTTAGTASEVTINYVI 149 (377)
T ss_pred HHHHHHHHHHHHHhCCCCHHHHhCcCccCCCCCCEEEeCCCCcchhccCCcEEE
Confidence 665555443210 0 000124579999997 787666554433
No 83
>cd08178 AAD_C C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD). Alcohol dehydrogenase domain located on the C-terminal of a bifunctional two-domain protein. The N-terminal of the protein contains an acetaldehyde-CoA dehydrogenase domain. This protein is involved in pyruvate metabolism. Pyruvate is converted to acetyl-CoA and formate by pyruvate formate-lysase (PFL). Under anaerobic condition, acetyl-CoA is reduced to acetaldehyde and ethanol by this two-domain protein. Acetyl-CoA is first converted into an enzyme-bound thiohemiacetal by the N-terminal acetaldehyde dehydrogenase domain. The enzyme-bound thiohemiacetal is subsequently reduced by the C-terminal NAD+-dependent alcohol dehydrogenase domain. In E. coli, this protein is called AdhE and was shown pyruvate formate-lysase (PFL) deactivase activity, which is involved in the inactivation of PFL, a key enzyme in anaerobic metabolism. In Escherichi
Probab=45.60 E-value=93 Score=33.30 Aligned_cols=74 Identities=16% Similarity=0.202 Sum_probs=36.4
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EE-EeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~-l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+.-+..-. ....+++.+.|.+..+ +. .....|.. .....++.++.+ + ..+.|.||++|| |
T Consensus 22 ~k~liVtd~~~~~---~g~~~~v~~~L~~~gi~~~~f~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIaiGG-G 88 (398)
T cd08178 22 KRAFIVTDRFMVK---LGYVDKVIDVLKRRGVETEVFSDVEPDP----SLETVRKGLELM----N-SFKPDTIIALGG-G 88 (398)
T ss_pred CeEEEEcChhHHh---CccHHHHHHHHHHCCCeEEEecCCCCCc----CHHHHHHHHHHH----H-hcCCCEEEEeCC-c
Confidence 5677775432211 1256677777765532 21 11222222 122233333332 1 246799999999 4
Q ss_pred hHHHHHHHH
Q 010507 159 TVGWVLGSV 167 (508)
Q Consensus 159 Tv~~vl~~l 167 (508)
++..+...+
T Consensus 89 S~iD~AK~i 97 (398)
T cd08178 89 SPMDAAKIM 97 (398)
T ss_pred cHHHHHHHH
Confidence 555554443
No 84
>TIGR02638 lactal_redase lactaldehyde reductase. This clade of genes encoding iron-containing alcohol dehydrogenase (pfam00465) proteins is generally found in apparent operons for the catabolism of rhamnose or fucose. Catabolism of both of these monosaccharides results in lactaldehyde which is reduced by this enzyme to 1,2 propanediol. This protein is alternatively known by the name 1,2 propanediol oxidoreductase. This enzyme is active under anaerobic conditions in E. coli while being inactivated by reactive oxygen species under aerobic conditions. Under aerobic conditions the lactaldehyde product of rhamnose and fucose catabolism is believed to be oxidized to lactate by a separate enzyme, lactaldehyde dehydrogenase.
Probab=44.76 E-value=1.1e+02 Score=32.51 Aligned_cols=103 Identities=17% Similarity=0.309 Sum_probs=50.5
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEE-eeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDL-SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l-~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+.-+..-.. .+.+++.+.|.+..+ +.+ ....|.. .....++.++.+ + ..+.|.||++|| |
T Consensus 30 ~r~lvvt~~~~~~~---g~~~~v~~~L~~~~i~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IiaiGG-G 96 (379)
T TIGR02638 30 KKALVVTDKDLIKF---GVADKVTDLLDEAGIAYELFDEVKPNP----TITVVKAGVAAF----K-ASGADYLIAIGG-G 96 (379)
T ss_pred CEEEEEcCcchhhc---cchHHHHHHHHHCCCeEEEECCCCCCc----CHHHHHHHHHHH----H-hcCCCEEEEeCC-h
Confidence 57777776433221 245666676765432 221 1222221 122333333332 1 246799999998 5
Q ss_pred hHHHHHHHHhh---cc---------cC--CCCCCCcEEEeeC--CCCcchhhhh
Q 010507 159 TVGWVLGSVGE---LN---------KQ--GREPVPPVAIIPL--GTGNDLSRSF 196 (508)
Q Consensus 159 Tv~~vl~~l~~---~~---------~~--~~~~~~pl~iiPl--GTgNd~ar~l 196 (508)
.+..+.-.+.- .+ .. .....+|+..||. |||-...+..
T Consensus 97 SviD~aKaia~~~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTTagTGse~t~~a 150 (379)
T TIGR02638 97 SPIDTAKAIGIISNNPEFADVRSLEGVAPTKKPGVPIIAIPTTAGTAAEVTINY 150 (379)
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHhhCCCccCCCCCCEEEECCCCchhhhhCCEE
Confidence 55555533321 10 00 0123578999997 6765554443
No 85
>cd08174 G1PDH-like Glycerol-1-phosphate dehydrogenase-like. Glycerol-1-phosphate dehydrogenase-like. The proteins of this family have not been characterized. The protein sequences have high similarity with that of glycerol-1-phosphate dehydrogenase (G1PDH). G1PDH plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. This family is bacteria specific.
Probab=41.94 E-value=1.3e+02 Score=31.26 Aligned_cols=37 Identities=22% Similarity=0.146 Sum_probs=28.3
Q ss_pred CccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCc
Q 010507 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGN 190 (508)
Q Consensus 147 ~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgN 190 (508)
+.+.||++|| |++..+...+... ..+|+..||.=.++
T Consensus 75 ~~d~iIaiGG-Gsv~D~aK~vA~~------~~~p~i~vPTt~~t 111 (331)
T cd08174 75 NVDAVVGIGG-GKVIDVAKYAAFL------RGIPLSVPTTNLND 111 (331)
T ss_pred CCCEEEEeCC-cHHHHHHHHHHhh------cCCCEEEecCcccc
Confidence 4688998988 8888888877653 56899999974444
No 86
>PRK10624 L-1,2-propanediol oxidoreductase; Provisional
Probab=41.79 E-value=1.2e+02 Score=32.17 Aligned_cols=105 Identities=14% Similarity=0.307 Sum_probs=52.0
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEE-eeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDL-SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l-~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+.-+..-.. .+.+++.+.|.+..+ +.+ ....+.. .....++.++.+ + ..+.+.||++|| |
T Consensus 31 ~~~lvvtd~~~~~~---g~~~~v~~~L~~~g~~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIaiGG-G 97 (382)
T PRK10624 31 KKALIVTDKTLVKC---GVVAKVTDVLDAAGLAYEIYDGVKPNP----TIEVVKEGVEVF----K-ASGADYLIAIGG-G 97 (382)
T ss_pred CEEEEEeCcchhhC---cchHHHHHHHHHCCCeEEEeCCCCCCc----CHHHHHHHHHHH----H-hcCCCEEEEeCC-h
Confidence 57777776433221 245667777765432 211 1222221 112223333322 1 246789999998 5
Q ss_pred hHHHHHHHHh---hccc---------C--CCCCCCcEEEeeC--CCCcchhhhhCC
Q 010507 159 TVGWVLGSVG---ELNK---------Q--GREPVPPVAIIPL--GTGNDLSRSFGW 198 (508)
Q Consensus 159 Tv~~vl~~l~---~~~~---------~--~~~~~~pl~iiPl--GTgNd~ar~lg~ 198 (508)
++..+...+. ..+. . .....+|+..||. |||--..+...+
T Consensus 98 S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTTagTGse~t~~avi 153 (382)
T PRK10624 98 SPQDTCKAIGIISNNPEFADVRSLEGVAPTKKPSVPIIAIPTTAGTAAEVTINYVI 153 (382)
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHhCcCcccCCCCCEEEECCCCchhhhhcceeee
Confidence 6655554332 1100 0 0123578999996 777666554443
No 87
>PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD. Currently three, structurally and catalytically, different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Iron-containing ADH's have been found in yeast (gene ADH4) [], as well as in Zymomonas mobilis (gene adhB) []. These two iron-containing ADH's are closely related to the following enzymes: Escherichia coli propanediol oxidoreductase (1.1.1.77 from EC) (gene fucO) [], an enzyme involved in the metabolism of fucose and which also seems to contain ferrous ion(s). Clostridium acetobutylicum NADPH- and NADH-dependent butanol dehydrogenases (1.1.1 from EC) (genes adh1, bdhA and bdhB) [], an enzyme which has activity using butanol and ethanol as substrates. E. coli adhE [], an iron-dependent enzyme which harbor three different activities: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating) (1.2.1.10 from EC) and pyruvate-formate-lyase deactivase. Bacterial glycerol dehydrogenase (1.1.1.6 from EC) (gene gldA or dhaD) []. Clostridium kluyveri NAD-dependent 4-hydroxybutyrate dehydrogenase (4hbd) (1.1.1.61 from EC). Citrobacter freundii and Klebsiella pneumoniae 1,3-propanediol dehydrogenase (1.1.1.202 from EC) (gene dhaT). Bacillus methanolicus NAD-dependent methanol dehydrogenase (1.1.1.244 from EC) []. E. coli and Salmonella typhimurium ethanolamine utilization protein eutG. E. coli hypothetical protein yiaY. ; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1RRM_A 2BL4_A 2BI4_A 3BFJ_R 1KQ3_A 1JQ5_A 1JPU_A 1JQA_A 3JZD_A 3UHJ_A ....
Probab=41.11 E-value=76 Score=33.37 Aligned_cols=101 Identities=22% Similarity=0.305 Sum_probs=52.0
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcccCe-E-EEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 82 ~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~-~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
+++|+..+ +-... .+.+++...|++..+ + ......++. .....+++++.+. ..+.|.||++||=-
T Consensus 23 r~lvVt~~-~~~~~--~~~~~v~~~L~~~~i~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~D~IIaiGGGS- 89 (366)
T PF00465_consen 23 RVLVVTDP-SLSKS--GLVDRVLDALEEAGIEVQVFDGVGPNP----TLEDVDEAAEQAR-----KFGADCIIAIGGGS- 89 (366)
T ss_dssp EEEEEEEH-HHHHH--THHHHHHHHHHHTTCEEEEEEEESSS-----BHHHHHHHHHHHH-----HTTSSEEEEEESHH-
T ss_pred CEEEEECc-hHHhC--ccHHHHHHHHhhCceEEEEEecCCCCC----cHHHHHHHHHHHH-----hcCCCEEEEcCCCC-
Confidence 88888887 43322 267888888855442 2 112122222 1233344444332 25779999999944
Q ss_pred HHHHHHHHhhcccC-------------CCCCCCcEEEeeC--CCCcchhhh
Q 010507 160 VGWVLGSVGELNKQ-------------GREPVPPVAIIPL--GTGNDLSRS 195 (508)
Q Consensus 160 v~~vl~~l~~~~~~-------------~~~~~~pl~iiPl--GTgNd~ar~ 195 (508)
+-.+.-.+.-.... ...+.+|+..||. |||-.+.+.
T Consensus 90 ~~D~aK~va~~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtGsE~t~~ 140 (366)
T PF00465_consen 90 VMDAAKAVALLLANPGDLRDLLGKGPPPTKPALPLIAIPTTAGTGSEVTPY 140 (366)
T ss_dssp HHHHHHHHHHHHTSSSCGGGGGCECSCCSS--SEEEEEESSSSSSGCCSSE
T ss_pred cCcHHHHHHhhccCCCcHHHHHhhccccccCCCcEEEeeCCcccccccccc
Confidence 44444443221110 0123379999997 555455443
No 88
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=40.23 E-value=14 Score=32.52 Aligned_cols=35 Identities=14% Similarity=0.035 Sum_probs=29.5
Q ss_pred hheehhhhcCcce-EEeeccccccccchhhhhhHhh
Q 010507 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVAM 49 (508)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~~ 49 (508)
.+|+..+..|..| |||..|..|+-.++.+||....
T Consensus 64 ~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~~~ 99 (133)
T PF00782_consen 64 EFIENAISEGGKVLVHCKAGLSRSGAVAAAYLMKKN 99 (133)
T ss_dssp HHHHHHHHTTSEEEEEESSSSSHHHHHHHHHHHHHH
T ss_pred HhhhhhhcccceeEEEeCCCcccchHHHHHHHHHHc
Confidence 3556667788888 9999999999999999998853
No 89
>COG1454 EutG Alcohol dehydrogenase, class IV [Energy production and conversion]
Probab=39.83 E-value=2e+02 Score=31.06 Aligned_cols=106 Identities=19% Similarity=0.329 Sum_probs=58.7
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEE-eeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCc
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDL-SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l-~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGD 157 (508)
.++++|+--|.-- ...+.+++.+.|...++ |.+ .++.|..- ....++-++.+ + ..+.|.||+.||
T Consensus 29 ~~r~liVTd~~~~---~~g~~~~v~~~L~~~~i~~~if~~v~p~P~----~~~v~~~~~~~----~-~~~~D~iIalGG- 95 (377)
T COG1454 29 AKRALIVTDRGLA---KLGLLDKVLDSLDAAGIEYEVFDEVEPEPT----IETVEAGAEVA----R-EFGPDTIIALGG- 95 (377)
T ss_pred CCceEEEECCccc---cchhHHHHHHHHHhcCCeEEEecCCCCCCC----HHHHHHHHHHH----H-hcCCCEEEEeCC-
Confidence 3677777766522 22367888888887762 222 23444331 12222222222 1 357899999999
Q ss_pred hhHHHHHHHHhhcccCC------------CCCCCcEEEee--CCCCcchhhhhCC
Q 010507 158 GTVGWVLGSVGELNKQG------------REPVPPVAIIP--LGTGNDLSRSFGW 198 (508)
Q Consensus 158 GTv~~vl~~l~~~~~~~------------~~~~~pl~iiP--lGTgNd~ar~lg~ 198 (508)
|++..+...+.-..... ..+.+|+--|| .|||-...+.--+
T Consensus 96 GS~~D~AK~i~~~~~~~~~~~~~~~i~~~~~~~~plIaIPTTaGTGSEvT~~aVi 150 (377)
T COG1454 96 GSVIDAAKAIALLAENPGSVLDYEGIGKVKKPKAPLIAIPTTAGTGSEVTPFAVI 150 (377)
T ss_pred ccHHHHHHHHHHHhhCCchhhhhcccccccCCCCCEEEecCCCcchhhhcCeEEE
Confidence 55555544442211100 12347888888 4888887776655
No 90
>PRK06203 aroB 3-dehydroquinate synthase; Reviewed
Probab=38.29 E-value=1.6e+02 Score=31.63 Aligned_cols=98 Identities=19% Similarity=0.173 Sum_probs=51.2
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe----EEEee-ccccceeecch-hHHHHHHHccchhhcccCCccEEEE
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV----FDLSE-VKPHEFVQYGL-ACLEKLAELGDFCAKDTRQKMRIVV 153 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v----~~l~~-~~~~~~~T~~~-~~a~~la~~~~~~~~~~~~~~~ivv 153 (508)
.++++++..+.--... ..+.+++.+.|..... |+... ....+ ..+.. ....++.+.+.+. ..+..+.||+
T Consensus 42 ~~r~liVtD~~v~~~~-~~l~~~v~~~L~~~g~~~~~~~~~~~~~~ge-~~k~~~~~v~~i~~~~~~~--~~dr~d~IIa 117 (389)
T PRK06203 42 PKKVLVVIDSGVLRAH-PDLLEQITAYFAAHADVLELVAEPLVVPGGE-AAKNDPALVEALHAAINRH--GIDRHSYVLA 117 (389)
T ss_pred CCeEEEEECchHHHhh-hhHHHHHHHHHHhcCCceeeeeeEEEccCCc-cCCCcHHHHHHHHHHHHHc--CCCCCceEEE
Confidence 3578888875544311 2356778887765432 32220 01111 11111 2234443333211 1345568888
Q ss_pred EcCchhHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 154 AGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 154 ~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
+|| |++..+...+.-.. ...+|+-.||.
T Consensus 118 iGG-Gsv~D~ak~iA~~~----~rgip~I~IPT 145 (389)
T PRK06203 118 IGG-GAVLDMVGYAAATA----HRGVRLIRIPT 145 (389)
T ss_pred eCC-cHHHHHHHHHHHHh----cCCCCEEEEcC
Confidence 887 78888776665322 14578999996
No 91
>cd08199 EEVS 2-epi-5-epi-valiolone synthase (EEVS). 2-epi-5-epi-valiolone synthases catalyze the cyclization of sedoheptulose 7-phosphate to 2-epi-5-epi-valiolone in the biosynthesis of C(7)N-aminocyclitol-containing products. The cyclization product, 2-epi-5-epi-valiolone ((2S,3S,4S,5R)-5-(hydroxymethyl)cyclohexanon-2,3,4,5-tetrol), is a precursor of the valienamine moiety. The valienamine unit is responsible for their biological activities as various glycosidic hydrolases inhibitors. Two important microbial secondary metabolites, i.e., validamycin and acarbose, are used in agricultural and biomedical applications. Validamycine A is an antifungal antibiotic which has a strong trehalase inhibitory activity and has been used to control sheath blight disease in rice caused by Rhizoctonia solani. Acarbose is an alpha-glucosidase inhibitor used for the treatment of type II insulin-independent diabetes. Salbostatin produced by Streptomyces albus also belongs to this family. It exhibits s
Probab=38.15 E-value=1e+02 Score=32.58 Aligned_cols=95 Identities=16% Similarity=0.259 Sum_probs=49.5
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCc-cEEEEEcCc
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK-MRIVVAGGD 157 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~-~~ivv~GGD 157 (508)
.+++++|..+..-.. ..+++.+.|.+... +........+ ........+++++.+.+. ..... +.||++||
T Consensus 26 ~~~~lvVtd~~v~~~----~~~~v~~~l~~~g~~~~~~v~~~~e-~~~s~~~v~~~~~~l~~~--~~~r~~d~IVaiGG- 97 (354)
T cd08199 26 SGRRFVVVDQNVDKL----YGKKLREYFAHHNIPLTILVLRAGE-AAKTMDTVLKIVDALDAF--GISRRREPVLAIGG- 97 (354)
T ss_pred CCeEEEEECccHHHH----HHHHHHHHHHhcCCceEEEEeCCCC-CCCCHHHHHHHHHHHHHc--CCCCCCCEEEEECC-
Confidence 457888886654322 34566666654432 2211111111 011234444444333211 12233 88888877
Q ss_pred hhHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 158 GTv~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
|++..+...+.... ...+|+-.||.
T Consensus 98 G~v~D~ak~~A~~~----~rg~p~i~VPT 122 (354)
T cd08199 98 GVLTDVAGLAASLY----RRGTPYVRIPT 122 (354)
T ss_pred cHHHHHHHHHHHHh----cCCCCEEEEcC
Confidence 78888887776322 14678999998
No 92
>PTZ00286 6-phospho-1-fructokinase; Provisional
Probab=37.86 E-value=83 Score=34.79 Aligned_cols=51 Identities=33% Similarity=0.416 Sum_probs=36.1
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchh---hhhCC
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGW 198 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~a---r~lg~ 198 (508)
.+-+.++++|||||..-+..-..+... ....+++--||-==-||+. +++|.
T Consensus 175 ~~I~~L~vIGGdgT~~~A~~L~ee~~~--~g~~I~VIGIPKTIDNDI~~td~S~GF 228 (459)
T PTZ00286 175 HGINILFTLGGDGTHRGALAIYKELRR--RKLNISVVGIPKTIDNDIPIIDESFGF 228 (459)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHHHH--hCCCceEEEeccccCCCCCCcccCcCc
Confidence 477899999999999766432221110 1246899999999999997 55665
No 93
>PLN02834 3-dehydroquinate synthase
Probab=37.58 E-value=1.1e+02 Score=33.40 Aligned_cols=94 Identities=15% Similarity=0.115 Sum_probs=50.7
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe----EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcC
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV----FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v----~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GG 156 (508)
++++++.++.... ...+++.+.|..... ++......+. +......+++++.+.+. ..+..+.||++||
T Consensus 101 ~rvlIVtD~~v~~----~~~~~v~~~L~~~g~~~~v~~~v~~~gE~--~ksl~~v~~~~~~l~~~--~~dr~~~VIAiGG 172 (433)
T PLN02834 101 KRVLVVTNETVAP----LYLEKVVEALTAKGPELTVESVILPDGEK--YKDMETLMKVFDKALES--RLDRRCTFVALGG 172 (433)
T ss_pred CEEEEEECccHHH----HHHHHHHHHHHhcCCceEEEEEEecCCcC--CCCHHHHHHHHHHHHhc--CCCcCcEEEEECC
Confidence 6788888655432 356677777765432 2222111111 12234444444333211 1234557888877
Q ss_pred chhHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 010507 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (508)
Q Consensus 157 DGTv~~vl~~l~~~~~~~~~~~~pl~iiPlG 187 (508)
|++..+...+.... ...+|+..||.-
T Consensus 173 -Gsv~D~ak~~A~~y----~rgiplI~VPTT 198 (433)
T PLN02834 173 -GVIGDMCGFAAASY----QRGVNFVQIPTT 198 (433)
T ss_pred -hHHHHHHHHHHHHh----cCCCCEEEECCc
Confidence 78888877654322 246799999984
No 94
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=37.39 E-value=1.8e+02 Score=33.05 Aligned_cols=88 Identities=18% Similarity=0.203 Sum_probs=58.6
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
..+.||.=+.|. ..+.+.....|...++ |++.....|. -+....++++++.. ..-...|.++|+.+.
T Consensus 411 ~~v~i~~gs~sd----~~~~~~~~~~l~~~g~~~~~~v~sahr----~~~~~~~~~~~~~~----~~~~v~i~~ag~~~~ 478 (577)
T PLN02948 411 PLVGIIMGSDSD----LPTMKDAAEILDSFGVPYEVTIVSAHR----TPERMFSYARSAHS----RGLQVIIAGAGGAAH 478 (577)
T ss_pred CeEEEEECchhh----HHHHHHHHHHHHHcCCCeEEEEECCcc----CHHHHHHHHHHHHH----CCCCEEEEEcCcccc
Confidence 345566544443 3466777777877776 8888877765 46677777766531 223467888999999
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeCCCC
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTG 189 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPlGTg 189 (508)
+--|+.++. ..|+-=+|..+|
T Consensus 479 l~~~~a~~t---------~~pvi~vp~~~~ 499 (577)
T PLN02948 479 LPGMVASMT---------PLPVIGVPVKTS 499 (577)
T ss_pred chHHHhhcc---------CCCEEEcCCCCC
Confidence 999887774 456666677555
No 95
>PRK00843 egsA NAD(P)-dependent glycerol-1-phosphate dehydrogenase; Reviewed
Probab=37.07 E-value=1.2e+02 Score=31.83 Aligned_cols=90 Identities=14% Similarity=0.155 Sum_probs=51.3
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
++++++..+.+-.. ..+++++.|.....+.+. ..|.. .....+++++++. ..+.+.||++|| |++
T Consensus 35 ~~~livtd~~~~~~----~~~~l~~~l~~~~~~~~~-~~~~~----t~~~v~~~~~~~~-----~~~~d~IIaiGG-Gsv 99 (350)
T PRK00843 35 GRALIVTGPTTKKI----AGDRVEENLEDAGDVEVV-IVDEA----TMEEVEKVEEKAK-----DVNAGFLIGVGG-GKV 99 (350)
T ss_pred CeEEEEECCcHHHH----HHHHHHHHHHhcCCeeEE-eCCCC----CHHHHHHHHHHhh-----ccCCCEEEEeCC-chH
Confidence 57888887766532 335566666433111111 12211 2333444444432 235688998888 888
Q ss_pred HHHHHHHhhcccCCCCCCCcEEEeeCCCCcc
Q 010507 161 GWVLGSVGELNKQGREPVPPVAIIPLGTGND 191 (508)
Q Consensus 161 ~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd 191 (508)
..+...+.-. ..+|+-.||.=-++|
T Consensus 100 ~D~ak~vA~~------rgip~I~IPTT~~td 124 (350)
T PRK00843 100 IDVAKLAAYR------LGIPFISVPTAASHD 124 (350)
T ss_pred HHHHHHHHHh------cCCCEEEeCCCccCC
Confidence 8888777632 467899999654444
No 96
>cd08198 DHQS-like2 Dehydroquinate synthase (DHQS)-like. DHQS catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase-like proteins. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. The activity of DHQS requires NAD as cofactor. Proteins of this family share sequence similarity and functional motifs with that of dehydroquinate synthase, but the specific function has not been characterized.
Probab=36.40 E-value=2.3e+02 Score=30.34 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=54.1
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EE---Eeeccccceeecc-hhHHHHHHHccchhhcccCCccEEEEE
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FD---LSEVKPHEFVQYG-LACLEKLAELGDFCAKDTRQKMRIVVA 154 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~---l~~~~~~~~~T~~-~~~a~~la~~~~~~~~~~~~~~~ivv~ 154 (508)
.++++|+.++.-.. ....+.+++...|.+..+ +. ....-|....++. ....+++.+.+.+. ..+..+.||+.
T Consensus 30 ~~r~lvVtD~~v~~-~~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~ge~~k~~~~~v~~i~~~l~~~--~~~r~~~IIal 106 (369)
T cd08198 30 RPKVLVVIDSGVAQ-ANPQLASDIQAYAAAHADALRLVAPPHIVPGGEACKNDPDLVEALHAAINRH--GIDRHSYVIAI 106 (369)
T ss_pred CCeEEEEECcchHH-hhhhHHHHHHHHHHhcCCceeeeeeeEecCCCccCCChHHHHHHHHHHHHHc--CCCcCcEEEEE
Confidence 36788888876554 212356777777754431 21 1111111111222 13334444433211 13455688888
Q ss_pred cCchhHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 010507 155 GGDGTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (508)
Q Consensus 155 GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlG 187 (508)
|| |++..+...+.... ...+|+-.||.=
T Consensus 107 GG-G~v~D~ag~vA~~~----~rGip~I~IPTT 134 (369)
T cd08198 107 GG-GAVLDAVGYAAATA----HRGVRLIRIPTT 134 (369)
T ss_pred CC-hHHHHHHHHHHHHh----cCCCCEEEECCC
Confidence 88 88888887776432 246888889954
No 97
>PRK15454 ethanol dehydrogenase EutG; Provisional
Probab=36.27 E-value=1.2e+02 Score=32.54 Aligned_cols=89 Identities=13% Similarity=0.128 Sum_probs=44.4
Q ss_pred HHHHHHHHhcccCe-EEEe-eccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhHHHHHHHH---hhccc-
Q 010507 99 LKERLQELMGKEQV-FDLS-EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSV---GELNK- 172 (508)
Q Consensus 99 ~~~~l~~~l~~~~v-~~l~-~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv~~vl~~l---~~~~~- 172 (508)
+.+++.+.|++.++ +.+- ...|.. .....++.++.+ + ..+.|.||++||=-.+- +.-.+ ...+.
T Consensus 65 ~~~~v~~~L~~~gi~~~~~~~v~~~P----~~~~v~~~~~~~----r-~~~~D~IiavGGGS~iD-~AKaia~~~~~~~~ 134 (395)
T PRK15454 65 MTAGLTRSLAVKGIAMTLWPCPVGEP----CITDVCAAVAQL----R-ESGCDGVIAFGGGSVLD-AAKAVALLVTNPDS 134 (395)
T ss_pred cHHHHHHHHHHcCCeEEEECCCCCCc----CHHHHHHHHHHH----H-hcCcCEEEEeCChHHHH-HHHHHHHHHhCCCc
Confidence 45667877876553 2221 222221 112233333332 2 35789999999954443 33222 11110
Q ss_pred --------CCCCCCCcEEEeeC--CCCcchhhhhC
Q 010507 173 --------QGREPVPPVAIIPL--GTGNDLSRSFG 197 (508)
Q Consensus 173 --------~~~~~~~pl~iiPl--GTgNd~ar~lg 197 (508)
....+.+|+..||. |||-...+.--
T Consensus 135 ~~~~~~~~~~~~~~~P~iaIPTtaGTGSE~t~~av 169 (395)
T PRK15454 135 TLAEMSETSVLQPRLPLIAIPTTAGTGSETTNVTV 169 (395)
T ss_pred cHHHHhcccccCCCCCEEEECCCCcchhhhCCeEE
Confidence 00123568999997 77765555433
No 98
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=35.92 E-value=1.4e+02 Score=31.49 Aligned_cols=40 Identities=30% Similarity=0.450 Sum_probs=32.1
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchh
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~a 193 (508)
.+-+.+|++|||||+.-+ +.|.+ ...++--||-==-||+.
T Consensus 93 ~~Id~LivIGGdgS~~~a-~~L~~-------~gi~vigiPkTIDNDl~ 132 (324)
T TIGR02483 93 LGLDALIAIGGDGTLGIA-RRLAD-------KGLPVVGVPKTIDNDLE 132 (324)
T ss_pred cCCCEEEEECCchHHHHH-HHHHh-------cCCCEEeeccccCCCCc
Confidence 477899999999999655 45554 24888889988899997
No 99
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=35.04 E-value=1.4e+02 Score=31.04 Aligned_cols=41 Identities=29% Similarity=0.260 Sum_probs=32.6
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchh
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~a 193 (508)
.+-+.+|++|||||+.-+. .|.+. ...|+--||-=--||+.
T Consensus 90 ~~Id~Li~IGGdgs~~~a~-~L~e~------~~i~vigiPkTIDNDl~ 130 (301)
T TIGR02482 90 LGIEGLVVIGGDGSYTGAQ-KLYEE------GGIPVIGLPGTIDNDIP 130 (301)
T ss_pred cCCCEEEEeCCchHHHHHH-HHHHh------hCCCEEeecccccCCCc
Confidence 4779999999999987663 44441 35788889999999998
No 100
>cd08182 HEPD Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP). Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP) with either NADH or NADPH as a cofactor. NADH is the preferred cofactor. PnAA is a biosynthetic intermediate for several phosphonates such as the antibiotic fosfomycin, phosphinothricin tripeptide (PTT), and 2-aminoethylphosphonate (AEP). This enzyme is named PhpC in PTT biosynthesis pathway in Streptomyces hygroscopicus and S. viridochromogenes. Members of this family are only found in bacteria.
Probab=34.81 E-value=2.3e+02 Score=29.85 Aligned_cols=46 Identities=28% Similarity=0.458 Sum_probs=27.2
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcc----------------cCCCCCCCcEEEeeC--CCCcch
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELN----------------KQGREPVPPVAIIPL--GTGNDL 192 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~----------------~~~~~~~~pl~iiPl--GTgNd~ 192 (508)
.+.|.||++|| |++..+...+.-.- .......+|+..||. |||--.
T Consensus 76 ~~~D~IIavGG-Gs~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagtgse~ 139 (367)
T cd08182 76 FGPDAVLAVGG-GSVLDTAKALAALLGAPREALEDLRIRNKERENRERALPLIAIPTTAGTGSEV 139 (367)
T ss_pred cCcCEEEEeCC-cHHHHHHHHHHHHHhCCCcHHHHHHHhccCCCCCCCCCCEEEeCCCCCchhhh
Confidence 46789999988 66666655543210 000124578999997 555433
No 101
>cd08549 G1PDH_related Glycerol-1-phosphate_dehydrogenase and related proteins. Bacterial and archeal glycerol-1-phosphate dehydrogenase-like oxidoreductases. The proteins have similarity with glycerol-1-phosphate dehydrogenase (G1PDH). G1PDH plays a role in the synthesis of phosphoglycerolipids in gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. It also contains archaeal Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) that plays an important role in the formation of the enantiomeric configuration of the glycerophosphate backbone (sn-glycerol-1-phosphate) of archaeal ether lipids.
Probab=34.03 E-value=1.3e+02 Score=31.29 Aligned_cols=87 Identities=10% Similarity=0.030 Sum_probs=50.3
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEe--eccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCc
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLS--EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~--~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGD 157 (508)
++++++..+.+-.. ..+++.+.|.+... +.+. +..+. ......+++++.+. ++.+.||+.||
T Consensus 25 ~kvlivtd~~~~~~----~~~~i~~~L~~~~~~~~i~~~~~~~~----p~~~~v~~~~~~~~------~~~d~IIaiGG- 89 (332)
T cd08549 25 SKIMIVCGNNTYKV----AGKEIIERLESNNFTKEVLERDSLLI----PDEYELGEVLIKLD------KDTEFLLGIGS- 89 (332)
T ss_pred CcEEEEECCcHHHH----HHHHHHHHHHHcCCeEEEEecCCCCC----CCHHHHHHHHHHhh------cCCCEEEEECC-
Confidence 57888887665432 23566666655432 2221 11111 02333444444432 26789999998
Q ss_pred hhHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 158 GTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 158 GTv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
|++..+...+.-. ..+|+-.||.=.
T Consensus 90 Gsv~D~aK~iA~~------~gip~I~VPTT~ 114 (332)
T cd08549 90 GTIIDLVKFVSFK------VGKPFISVPTAP 114 (332)
T ss_pred cHHHHHHHHHHHH------cCCCEEEeCCCc
Confidence 7888888777632 467899999643
No 102
>cd08189 Fe-ADH5 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contains different protein domain. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=33.88 E-value=2.2e+02 Score=30.07 Aligned_cols=102 Identities=19% Similarity=0.319 Sum_probs=50.1
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EE-EeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~-l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+..+..-. . ...+++.+.|.+..+ +. .....+.. .....+++++.+ + ..+.+.||++|| |
T Consensus 27 ~~~lvvt~~~~~~-~--g~~~~v~~~L~~~g~~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~d~IIaiGG-G 93 (374)
T cd08189 27 KKVLIVTDKGLVK-L--GLLDKVLEALEGAGIEYAVYDGVPPDP----TIENVEAGLALY----R-ENGCDAILAVGG-G 93 (374)
T ss_pred CeEEEEeCcchhh-c--ccHHHHHHHHHhcCCeEEEeCCCCCCc----CHHHHHHHHHHH----H-hcCCCEEEEeCC-c
Confidence 5777776654322 1 245667777765432 22 22222222 112223333322 1 246789999998 5
Q ss_pred hHHHHHHHHhhccc-------------CCCCCCCcEEEeeC--CCCcchhhh
Q 010507 159 TVGWVLGSVGELNK-------------QGREPVPPVAIIPL--GTGNDLSRS 195 (508)
Q Consensus 159 Tv~~vl~~l~~~~~-------------~~~~~~~pl~iiPl--GTgNd~ar~ 195 (508)
++..+...+.-... ....+.+|+..||. |||-..++.
T Consensus 94 S~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagTGsE~t~~ 145 (374)
T cd08189 94 SVIDCAKAIAARAANPKKSLRKLTGLLKVKKPLPPLFAIPTTAGTGSEVTIA 145 (374)
T ss_pred cHHHHHHHHHHHHhCCCCCHHHHhCccccCCCCCCEEEEECCCccccccCCe
Confidence 55555544321100 00013368888986 666554443
No 103
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=33.61 E-value=14 Score=32.53 Aligned_cols=33 Identities=21% Similarity=0.115 Sum_probs=26.7
Q ss_pred heehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
.|+..+..|..+ |||..|..|+..++.+|+...
T Consensus 73 ~i~~~~~~~~~vlVHC~~G~~Rs~~~~~~~l~~~ 106 (139)
T cd00127 73 FIDDAREKGGKVLVHCLAGVSRSATLVIAYLMKT 106 (139)
T ss_pred HHHHHHhcCCcEEEECCCCCchhHHHHHHHHHHH
Confidence 345555667777 899999999999999998864
No 104
>cd08175 G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner. Glycerol-1-phosphate dehydrogenase (G1PDH) plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires a Ni++ ion. In Bacillus subtilis, it has been described as AraM gene in L-arabinose (ara) operon. AraM protein forms homodimer. This family is bacteria specific.
Probab=33.11 E-value=1.3e+02 Score=31.58 Aligned_cols=89 Identities=11% Similarity=0.093 Sum_probs=49.0
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEe-eccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLS-EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~-~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+.-+.+- ....+++.+.|....+ +.+. ...+.. ........++++.+ + . +.+.||++|| |
T Consensus 24 ~~~livtd~~~~----~~~~~~v~~~l~~~~i~~~~~~~~~~~~--~pt~~~v~~~~~~~----~-~-~~d~IIaIGG-G 90 (348)
T cd08175 24 KKALIVADENTY----AAAGKKVEALLKRAGVVVLLIVLPAGDL--IADEKAVGRVLKEL----E-R-DTDLIIAVGS-G 90 (348)
T ss_pred CcEEEEECCcHH----HHHHHHHHHHHHHCCCeeEEeecCCCcc--cCCHHHHHHHHHHh----h-c-cCCEEEEECC-c
Confidence 467777644332 1224667777765543 2111 111110 01223334444433 1 2 6799999998 7
Q ss_pred hHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 159 Tv~~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
++..+...+.-. ..+|+-.||.=.
T Consensus 91 s~~D~aK~vA~~------~~~p~i~IPTTa 114 (348)
T cd08175 91 TINDITKYVSYK------TGIPYISVPTAP 114 (348)
T ss_pred HHHHHHHHHHHh------cCCCEEEecCcc
Confidence 788888777643 467899999643
No 105
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=33.10 E-value=1.6e+02 Score=30.94 Aligned_cols=40 Identities=28% Similarity=0.320 Sum_probs=33.1
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchh
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~a 193 (508)
.+-+.++++|||||+.-+. .|.+ ...|+--||-==-||+.
T Consensus 91 ~~Id~Li~IGGdgs~~~a~-~L~e-------~~i~vigiPkTIDNDi~ 130 (317)
T cd00763 91 HGIDALVVIGGDGSYMGAM-RLTE-------HGFPCVGLPGTIDNDIP 130 (317)
T ss_pred cCCCEEEEECCchHHHHHH-HHHH-------cCCCEEEecccccCCCC
Confidence 5779999999999987764 4554 35899999999999998
No 106
>cd08184 Fe-ADH3 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and is belonged to the iron-containing alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron or zinc ions. Members of this family are mainly found in bacteria.
Probab=32.15 E-value=2.1e+02 Score=30.26 Aligned_cols=48 Identities=31% Similarity=0.288 Sum_probs=27.0
Q ss_pred CccEEEEEcCchhHHHHHHHHh---hccc-------C--CCCCCCcEEEeeC--CCCcchhhh
Q 010507 147 QKMRIVVAGGDGTVGWVLGSVG---ELNK-------Q--GREPVPPVAIIPL--GTGNDLSRS 195 (508)
Q Consensus 147 ~~~~ivv~GGDGTv~~vl~~l~---~~~~-------~--~~~~~~pl~iiPl--GTgNd~ar~ 195 (508)
+.|.||++|| |++-.+.-.+. ..+. + ...+.+|+..||. |||--..+.
T Consensus 81 ~~D~IIaiGG-GS~iD~AKaia~~~~~~~~~~~~~~~~~~~~~~~PlIaVPTTaGTGSE~t~~ 142 (347)
T cd08184 81 LPCAIVGIGG-GSTLDVAKAVSNMLTNPGSAEDYQGWDLVKNPAVYKIGIPTLSGTGAEASRT 142 (347)
T ss_pred CCCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHhcccccccCCCCcEEEEeCCCccccccCCc
Confidence 6799999998 44444443332 1100 0 0123468999996 777655543
No 107
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=31.45 E-value=54 Score=33.25 Aligned_cols=19 Identities=37% Similarity=0.622 Sum_probs=15.5
Q ss_pred CCCCeEEEEEcCCCCCCCh
Q 010507 78 PPEAPMVVFINSRSGGRHG 96 (508)
Q Consensus 78 ~~~~~~lviiNp~sg~~~~ 96 (508)
.+..++++||||.||-|.+
T Consensus 28 ~p~~~f~vIiNP~sGPG~~ 46 (253)
T PF12138_consen 28 HPSVPFTVIINPNSGPGSA 46 (253)
T ss_pred CCCCcEEEEEcCCCCCCCC
Confidence 4566799999999998744
No 108
>PRK09267 flavodoxin FldA; Validated
Probab=31.09 E-value=1.8e+02 Score=26.77 Aligned_cols=28 Identities=25% Similarity=0.500 Sum_probs=20.6
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcc
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGK 109 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~ 109 (508)
|++++|++=+.+| +.+++.+++.+.|..
T Consensus 1 mmki~IiY~S~tG--nT~~vA~~Ia~~l~~ 28 (169)
T PRK09267 1 MAKIGIFFGSDTG--NTEDIAKMIQKKLGK 28 (169)
T ss_pred CCeEEEEEECCCC--hHHHHHHHHHHHhCC
Confidence 4578899966555 556788888888864
No 109
>cd08190 HOT Hydroxyacid-oxoacid transhydrogenase (HOT) involved in gamma-hydroxybutyrate metabolism. Hydroxyacid-oxoacid transhydrogenase (HOT), also known as D-2-hydroxyglutarate transhydrogenase. It catalyzes the conversion of gamma-hydroxybutyrate (GHB) to succinic semialdehyde (SSA), coupled to the stoichiometric conversion of alpha-ketoglutarate to D-2-hydroxyglutarate in gamma-Hydroxybutyrate catabolism. Unlike many other alcohols, which are oxidized by NAD-linked dehydrogenases, gamma-hydroxybutyrate is metabolized to succinate semialdehyde by hydroxyacid-oxoacid transhydrogenase which does not require free NAD or NADP, but instead using alpha -ketoglutarate as an acceptor, converting it to d-2-hydroxyglutarate. Alpha-ketoglutarate serves as an intermediate acceptor to regenerate NAD(P) required for the oxidation of GHB. HOT also catalyzes the reversible oxidation of a hydroxyacid obligatorily coupled to the reduction of an oxoacid, and requires no cofactor. In mammals, the HOT
Probab=30.17 E-value=2.7e+02 Score=30.02 Aligned_cols=71 Identities=13% Similarity=0.158 Sum_probs=34.2
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEE-eeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDL-SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l-~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+.-+..-. ....+++.+.|.+.++ +.+ ....+.. ......+.++.+ + ..+.|.||++|| |
T Consensus 24 ~~vlivt~~~~~~---~g~~~~v~~~L~~~gi~~~~f~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIaiGG-G 90 (414)
T cd08190 24 RRVCLVTDPNLAQ---LPPVKVVLDSLEAAGINFEVYDDVRVEP----TDESFKDAIAFA----K-KGQFDAFVAVGG-G 90 (414)
T ss_pred CeEEEEECcchhh---cchHHHHHHHHHHcCCcEEEeCCCCCCc----CHHHHHHHHHHH----H-hcCCCEEEEeCC-c
Confidence 5777776543221 1245667777765432 222 2222222 112233333322 1 246799999999 4
Q ss_pred hHHHHH
Q 010507 159 TVGWVL 164 (508)
Q Consensus 159 Tv~~vl 164 (508)
++..+.
T Consensus 91 SviD~A 96 (414)
T cd08190 91 SVIDTA 96 (414)
T ss_pred cHHHHH
Confidence 444443
No 110
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=29.65 E-value=22 Score=33.77 Aligned_cols=35 Identities=17% Similarity=0.106 Sum_probs=30.0
Q ss_pred chheehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 14 SSMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 14 ~~~~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
...|+....-|..| |||..|-+|+-.++.+||...
T Consensus 95 v~~i~~~~~~g~kVvVHC~~GigRSgtviaA~lm~~ 130 (180)
T COG2453 95 VDFIEEALSKGKKVVVHCQGGIGRSGTVIAAYLMLY 130 (180)
T ss_pred HHHHHHHHhcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 34567778888777 899999999999999999876
No 111
>cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. 5-hydroxyvalerate dehydrogenase (HVD) is an iron-containing (type III) NAD-dependent alcohol dehydrogenase. It plays a role in the cyclopentanol metabolism biochemical pathway. It catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. This cyclopentanol (cpn) degradation pathway is present in some bacteria which can use cyclopentanol as sole carbon source. In Comamonas sp. strain NCIMB 9872, this enzyme is encoded by the CpnD gene.
Probab=28.08 E-value=3.1e+02 Score=29.04 Aligned_cols=100 Identities=19% Similarity=0.241 Sum_probs=48.8
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EE-EeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~-l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+.-+.--. ....+++...|.+..+ +. .....+.. ......+.++.+. ..+.+.||++|| |
T Consensus 27 ~~~livt~~~~~~---~~~~~~v~~~L~~~~~~~~~~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIaiGG-G 93 (376)
T cd08193 27 KRVLVVTDPGILK---AGLIDPLLASLEAAGIEVTVFDDVEADP----PEAVVEAAVEAAR-----AAGADGVIGFGG-G 93 (376)
T ss_pred CeEEEEcCcchhh---CccHHHHHHHHHHcCCeEEEECCCCCCc----CHHHHHHHHHHHH-----hcCCCEEEEeCC-c
Confidence 5666665432111 1245667777765432 21 12222221 1223334443321 247789999998 6
Q ss_pred hHHHHHHHHhhccc------------CCCCCCCcEEEeeC--CCCcchh
Q 010507 159 TVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDLS 193 (508)
Q Consensus 159 Tv~~vl~~l~~~~~------------~~~~~~~pl~iiPl--GTgNd~a 193 (508)
++..+...+.-... .......|+-.||. |||-...
T Consensus 94 s~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgSe~t 142 (376)
T cd08193 94 SSMDVAKLVAVLAGSDQPLADMYGVDLVAGPRLPLILVPTTAGTGSEVT 142 (376)
T ss_pred hHHHHHHHHHHHHHCCCCHHHHhCCCccCCCCCCEEEeCCCCcchHhhC
Confidence 66666555432100 00023568888996 5554333
No 112
>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=28.03 E-value=2e+02 Score=31.72 Aligned_cols=51 Identities=31% Similarity=0.430 Sum_probs=34.8
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchh---hhhCC
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGW 198 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~a---r~lg~ 198 (508)
.+-+.++++|||||..-...--.+... ....+++--||-==-||+. +++|.
T Consensus 171 ~~I~~L~vIGGdgT~~gA~~l~ee~~~--~g~~I~VIGIPKTIDNDi~~td~S~GF 224 (443)
T PRK06830 171 MNINILFVIGGDGTLRGASAIAEEIER--RGLKISVIGIPKTIDNDINFIQKSFGF 224 (443)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHHHH--hCCCceEEEeccccCCCCcCcccCCCH
Confidence 467899999999999766432221110 1245789999988899996 44554
No 113
>PF12219 End_tail_spike: Catalytic domain of bacteriophage endosialidase; InterPro: IPR024430 This entry represents the C-terminal domain of endosialidases which is approximately 160 amino acids in length. There are two conserved sequence motifs: VSR and YGA. The endosialidase protein forms homotrimeric molecules and this domain complexes into a tail-spike stalk. The stalk region folds in a triple beta-helix that is interrupted by a small triple beta-prism domain. The tail-spike is a multifunctional protein device used by the phage to fulfil the following functions: (i) to adsorb to the bacterial polySia capsule (ii) to de-polymerise the capsule to gain access to the outer bacterial membrane, and finally (iii) to mediate tight adhesion to the membrane, a prerequisite for the initiation of the infection cycle [].; PDB: 3JU4_A 3GW6_A 3GVL_A 3GVK_B 3GVJ_A 1V0E_B 1V0F_E.
Probab=27.99 E-value=32 Score=31.90 Aligned_cols=15 Identities=40% Similarity=0.831 Sum_probs=11.4
Q ss_pred CccEEEEEcCchhHH
Q 010507 147 QKMRIVVAGGDGTVG 161 (508)
Q Consensus 147 ~~~~ivv~GGDGTv~ 161 (508)
...++|+||||||-.
T Consensus 84 tgQRlIvsGGegtss 98 (160)
T PF12219_consen 84 TGQRLIVSGGEGTSS 98 (160)
T ss_dssp GG-EEEEESSSSSSG
T ss_pred cccEEEEeCCCCccc
Confidence 346899999999853
No 114
>PRK00536 speE spermidine synthase; Provisional
Probab=27.69 E-value=43 Score=34.22 Aligned_cols=19 Identities=21% Similarity=0.191 Sum_probs=14.2
Q ss_pred CCccEEEEEcCc-hhHHHHH
Q 010507 146 RQKMRIVVAGGD-GTVGWVL 164 (508)
Q Consensus 146 ~~~~~ivv~GGD-GTv~~vl 164 (508)
..+.++|+.||| ||+-||+
T Consensus 72 ~pk~VLIiGGGDGg~~REvL 91 (262)
T PRK00536 72 ELKEVLIVDGFDLELAHQLF 91 (262)
T ss_pred CCCeEEEEcCCchHHHHHHH
Confidence 566788888899 5666665
No 115
>PRK14021 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional
Probab=27.07 E-value=2.3e+02 Score=31.79 Aligned_cols=36 Identities=22% Similarity=0.095 Sum_probs=27.1
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
.+.+.||++|| |++..+...+.... ...+|+..+|.
T Consensus 268 ~r~D~IIAIGG-Gsv~D~AKfvA~~y----~rGi~~i~vPT 303 (542)
T PRK14021 268 TRSDAIVGLGG-GAATDLAGFVAATW----MRGIRYVNCPT 303 (542)
T ss_pred CCCcEEEEEcC-hHHHHHHHHHHHHH----HcCCCEEEeCC
Confidence 35788888888 88888888876532 14788999998
No 116
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=26.94 E-value=1.1e+02 Score=28.21 Aligned_cols=39 Identities=31% Similarity=0.441 Sum_probs=26.2
Q ss_pred EEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhh
Q 010507 150 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSR 194 (508)
Q Consensus 150 ~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar 194 (508)
.-...+|+ |...++..+... ....+-+.+|-+|| ||+.+
T Consensus 44 ~n~g~~G~-t~~~~~~~l~~~----~~~~pd~Vii~~G~-ND~~~ 82 (191)
T cd01836 44 RLFAKTGA-TSADLLRQLAPL----PETRFDVAVISIGV-NDVTH 82 (191)
T ss_pred EEEecCCc-CHHHHHHHHHhc----ccCCCCEEEEEecc-cCcCC
Confidence 45567888 456666666542 13567789999998 89865
No 117
>cd08191 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. 6-hydroxyhexanoate dehydrogenase (HHD). The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. Some bacteria can grow on cyclic ketones, cyclohexylamine, and alcohols as sole carbon source. Cyclohexylamine is an insecticide and antiseptic in various industries and is considered a possible environmental pollutant. The degradation of these chemical compounds are through the cyclohexanol and cyclohexanone biological oxidation pathway. The intermediates of this pathway include cyclohexanol, cyclohexanone, e-caprolactone, 6-hydroxyhexanoate, 6-oxohexanoate and adipate. The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate.
Probab=26.94 E-value=3.5e+02 Score=28.75 Aligned_cols=102 Identities=21% Similarity=0.272 Sum_probs=50.7
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EE-EeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~-l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+..+.... ....+++.+.|.+..+ +. .....|.. ......+.++.+ + ..+.|.||++|| |
T Consensus 23 ~~~livt~~~~~~---~~~~~~v~~~L~~~~~~~~~f~~v~~~~----~~~~v~~~~~~~----~-~~~~D~IIaiGG-G 89 (386)
T cd08191 23 SRALIVTDERMAG---TPVFAELVQALAAAGVEVEVFDGVLPDL----PRSELCDAASAA----A-RAGPDVIIGLGG-G 89 (386)
T ss_pred CeEEEEECcchhh---cchHHHHHHHHHHcCCeEEEECCCCCCc----CHHHHHHHHHHH----H-hcCCCEEEEeCC-c
Confidence 5778887654432 1355667777765432 21 11222111 011112222221 1 256799999998 6
Q ss_pred hHHHHHHHHhhccc------------CCCCCCCcEEEeeC--CCCcchhhh
Q 010507 159 TVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDLSRS 195 (508)
Q Consensus 159 Tv~~vl~~l~~~~~------------~~~~~~~pl~iiPl--GTgNd~ar~ 195 (508)
++..+...+.-... ....+.+|+..||. |||-..++.
T Consensus 90 S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTtagTGSE~t~~ 140 (386)
T cd08191 90 SCIDLAKIAGLLLAHGGDVRDYYGEFKVPGPVLPLIAVPTTAGTGSEVTPV 140 (386)
T ss_pred hHHHHHHHHHHHHhCCCCHHHHhCccccCCCCCCEEEEeCCCcchhhhCCe
Confidence 66666655532110 00123578999986 666555443
No 118
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=26.24 E-value=2.3e+02 Score=29.99 Aligned_cols=46 Identities=24% Similarity=0.146 Sum_probs=32.5
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchh
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~a 193 (508)
.+-+.+|++|||||+.-+. .|.+.-. .....+++--||-=--||+.
T Consensus 91 ~~I~~Lv~IGGd~s~~~a~-~L~e~~~-~~~~~i~vigiPkTIDNDl~ 136 (338)
T cd00363 91 HGIDALVVIGGDGSYTGAD-LLTEEWP-SKYQGFNVIGLPGTIDNDIK 136 (338)
T ss_pred hCCCEEEEeCCHHHHHHHH-HHHHHHH-hcCCCccEEEeeecccCCCc
Confidence 4778999999999997664 3332100 01357899999977789987
No 119
>PRK03202 6-phosphofructokinase; Provisional
Probab=25.95 E-value=2.4e+02 Score=29.64 Aligned_cols=40 Identities=30% Similarity=0.292 Sum_probs=32.7
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchh
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~a 193 (508)
.+-+.+|++|||||+.-+. .|.+ ...|+--||-==-||+.
T Consensus 92 ~~Id~Li~IGGd~s~~~a~-~L~e-------~~i~vigiPkTIDNDl~ 131 (320)
T PRK03202 92 LGIDALVVIGGDGSYMGAK-RLTE-------HGIPVIGLPGTIDNDIA 131 (320)
T ss_pred cCCCEEEEeCChHHHHHHH-HHHh-------cCCcEEEecccccCCCC
Confidence 5779999999999998764 4554 36788889988899998
No 120
>PLN02564 6-phosphofructokinase
Probab=25.54 E-value=2.2e+02 Score=31.76 Aligned_cols=46 Identities=30% Similarity=0.330 Sum_probs=31.7
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchh
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~a 193 (508)
.+-+.++++|||||..-...-..+... ....+++.-||-==-||+.
T Consensus 175 ~~Id~LivIGGDGS~~gA~~L~e~~~~--~g~~i~VIGIPKTIDNDI~ 220 (484)
T PLN02564 175 RGINQVYIIGGDGTQKGASVIYEEIRR--RGLKVAVAGIPKTIDNDIP 220 (484)
T ss_pred hCCCEEEEECCchHHHHHHHHHHHHHH--cCCCceEEEecccccCCCc
Confidence 477899999999999765432221110 1235568888988899987
No 121
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=25.13 E-value=22 Score=35.90 Aligned_cols=32 Identities=6% Similarity=-0.103 Sum_probs=26.1
Q ss_pred heehhhhcCcce-EEeeccccccccchhhhhhH
Q 010507 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (508)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~ 47 (508)
+++..+.-|..+ |||.-|.+|+-++++.||..
T Consensus 162 ~i~~~l~~g~~VaVHC~AGlGRTGtl~AayLI~ 194 (241)
T PTZ00393 162 IVNNVIKNNRAVAVHCVAGLGRAPVLASIVLIE 194 (241)
T ss_pred HHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 344555567777 99999999999999999985
No 122
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=24.55 E-value=1.1e+02 Score=27.83 Aligned_cols=39 Identities=23% Similarity=0.186 Sum_probs=23.1
Q ss_pred EEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhh
Q 010507 151 IVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSR 194 (508)
Q Consensus 151 ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar 194 (508)
-...+||. ..+++..+...- ....|.+.+|=+|| ||+.+
T Consensus 27 N~Gi~G~~-~~~~~~~~~~~~---~~~~p~~vvi~~G~-ND~~~ 65 (171)
T cd04502 27 NRGFGGST-LADCLHYFDRLV---LPYQPRRVVLYAGD-NDLAS 65 (171)
T ss_pred ecCcccch-HHHHHHHHHhhh---ccCCCCEEEEEEec-CcccC
Confidence 34556774 344554443321 12467799999998 88753
No 123
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=24.33 E-value=3.8e+02 Score=31.88 Aligned_cols=75 Identities=19% Similarity=0.232 Sum_probs=37.4
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhc--ccCe-E-EEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEc
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMG--KEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAG 155 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~--~~~v-~-~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~G 155 (508)
.++++|+..+..-. . ...+++.+.|. ...+ + .+....|.. .....+++++.+. ..+.|.||++|
T Consensus 480 ~~~~lvVtd~~~~~-~--g~~~~v~~~L~~~~~~i~~~~~~~v~~np----~~~~v~~~~~~~~-----~~~~D~IIaiG 547 (862)
T PRK13805 480 KKRAFIVTDRFMVE-L--GYVDKVTDVLKKRENGVEYEVFSEVEPDP----TLSTVRKGAELMR-----SFKPDTIIALG 547 (862)
T ss_pred CCEEEEEECcchhh-c--chHHHHHHHHhcccCCCeEEEeCCCCCCc----CHHHHHHHHHHHH-----hcCCCEEEEeC
Confidence 36777777543321 1 25566777776 3322 1 122222322 1223333333321 24679999999
Q ss_pred CchhHHHHHHHH
Q 010507 156 GDGTVGWVLGSV 167 (508)
Q Consensus 156 GDGTv~~vl~~l 167 (508)
| |++..+...+
T Consensus 548 G-GSviD~AK~i 558 (862)
T PRK13805 548 G-GSPMDAAKIM 558 (862)
T ss_pred C-chHHHHHHHH
Confidence 8 5555555444
No 124
>KOG4465 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.07 E-value=58 Score=34.88 Aligned_cols=52 Identities=27% Similarity=0.386 Sum_probs=35.8
Q ss_pred eEEEEecCCCCCccccccCCCCchhhcc---------------cCCcccCCCC-CcEEEEEeCC-hhHHH
Q 010507 390 RAIVALNLHNYASGRNPWGNLSPEYLEK---------------KGFVEAHADD-GLLEIFGLKQ-GWHAS 442 (508)
Q Consensus 390 ~~lvv~N~~~ygGG~~~wg~~~~~~~~~---------------~g~~~a~~dD-GlLEVv~l~~-~~~~~ 442 (508)
.+|+++.+..|+|+.+|.- .-.+|+++ .+|.-|++|| |+||+++|.. +..+.
T Consensus 522 vfii~tdndt~ageihp~~-aik~yrea~~i~dakliv~amqa~d~siadp~dagmldi~gfdsa~~~ii 590 (598)
T KOG4465|consen 522 VFIIFTDNDTFAGEIHPAE-AIKEYREAMDIHDAKLIVCAMQANDFSIADPDDAGMLDICGFDSAALDII 590 (598)
T ss_pred EEEEEecCcccccccCHHH-HHHHHHHhcCCCcceEEEEEeecCCceecCcccccceeeccccchHHHHH
Confidence 3677888889999999862 23345543 2566677665 8999999987 44443
No 125
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated
Probab=23.77 E-value=2.4e+02 Score=30.79 Aligned_cols=45 Identities=20% Similarity=0.137 Sum_probs=32.6
Q ss_pred CCccEEEEEcCchhHHHHHHHHhh-cccCCCCCCCcEEEeeCCCCcchh
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGE-LNKQGREPVPPVAIIPLGTGNDLS 193 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~-~~~~~~~~~~pl~iiPlGTgNd~a 193 (508)
.+-+.++++|||||..-+. .|.+ ... ....+|+--||-==-||+.
T Consensus 111 ~~Id~Li~IGGdgS~~~a~-~L~~~~~~--~g~~i~vvgIPkTIDNDl~ 156 (403)
T PRK06555 111 DGVDILHTIGGDDTNTTAA-DLAAYLAE--NGYDLTVVGLPKTIDNDVV 156 (403)
T ss_pred cCCCEEEEECChhHHHHHH-HHHHHHHH--hCCCceEEEeeeeeeCCCC
Confidence 5778999999999987664 3322 110 0236899999999999996
No 126
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=23.46 E-value=2.5e+02 Score=33.17 Aligned_cols=47 Identities=21% Similarity=0.282 Sum_probs=34.1
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchh
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~a 193 (508)
.+-+.+|++|||||..-+. .|.+.........+|+-.||-==-||+.
T Consensus 477 ~~Id~LivIGGdgs~~~a~-~L~~~~~~y~~~~i~vVgIPkTIDNDv~ 523 (762)
T cd00764 477 YGIDGLIIVGGFEAYKGLL-QLREAREQYEEFCIPMVLIPATVSNNVP 523 (762)
T ss_pred cCCCEEEEECChhHHHHHH-HHHHHHhhCCCCCccEEEecccccCCCC
Confidence 5779999999999998664 4443211111246899999999999987
No 127
>cd08196 DHQS-like1 Dehydroquinate synthase (DHQS)-like. DHQS catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase-like proteins. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. The activity of DHQS requires NAD as cofactor. Proteins of this family share sequence similarity and functional motifs with that of dehydroquinate synthase, but the specific function has not been characterized.
Probab=22.94 E-value=5.2e+02 Score=27.35 Aligned_cols=91 Identities=15% Similarity=0.226 Sum_probs=47.2
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
++++++..+.-.. -..+++++.|.....+.+....+.. .....+++.+.+.+. ..+..+.||+.|| |.+
T Consensus 20 ~r~lIVtD~~v~~----l~~~~l~~~L~~~~~~~~~~~e~~k----~l~~v~~~~~~~~~~--~~~r~d~iIaiGG-Gsv 88 (346)
T cd08196 20 ENDVFIVDANVAE----LYRDRLDLPLDAAPVIAIDATEENK----SLEAVSSVIESLRQN--GARRNTHLVAIGG-GII 88 (346)
T ss_pred CeEEEEECccHHH----HHHHHHHHHhcCCeEEEeCCCCCCC----CHHHHHHHHHHHHHc--CCCCCcEEEEECC-hHH
Confidence 5778888765432 2556677766532222222222221 234444544433211 1234478888877 777
Q ss_pred HHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 161 GWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 161 ~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
..+...+..... ...|+-.||.
T Consensus 89 ~D~ak~vA~~~~----rgi~~i~iPT 110 (346)
T cd08196 89 QDVTTFVASIYM----RGVSWSFVPT 110 (346)
T ss_pred HHHHHHHHHHHH----cCCCeEEecc
Confidence 777776653221 3456666665
No 128
>PRK10586 putative oxidoreductase; Provisional
Probab=20.63 E-value=4.7e+02 Score=27.78 Aligned_cols=39 Identities=15% Similarity=0.160 Sum_probs=27.9
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcc
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGND 191 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd 191 (508)
.+.|.||++|| |++..+.-.+... ..+|+..||.=-+||
T Consensus 85 ~~~d~iiavGG-Gs~iD~aK~~a~~------~~~p~i~vPT~a~t~ 123 (362)
T PRK10586 85 DDRQVVIGVGG-GALLDTAKALARR------LGLPFVAIPTIAATC 123 (362)
T ss_pred cCCCEEEEecC-cHHHHHHHHHHhh------cCCCEEEEeCCcccc
Confidence 35688998987 6677777776653 467999999855544
No 129
>COG0371 GldA Glycerol dehydrogenase and related enzymes [Energy production and conversion]
Probab=20.45 E-value=4.2e+02 Score=28.50 Aligned_cols=44 Identities=16% Similarity=0.037 Sum_probs=33.9
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhh
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSF 196 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~l 196 (508)
.+.+.||.+|| |++-.+.-.+... ...||.++|.=..+|=.-|-
T Consensus 83 ~~~d~vIGVGG-Gk~iD~aK~~A~~------~~~pfIsvPT~AS~Da~~Sp 126 (360)
T COG0371 83 DGADVVIGVGG-GKTIDTAKAAAYR------LGLPFISVPTIASTDAITSP 126 (360)
T ss_pred cCCCEEEEecC-cHHHHHHHHHHHH------cCCCEEEecCccccccccCC
Confidence 46789999988 7777887777663 68899999998888755443
Done!