Query 010507
Match_columns 508
No_of_seqs 273 out of 1836
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 08:17:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010507.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010507hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s40_A Diacylglycerol kinase; 100.0 1.4E-44 4.7E-49 366.6 24.1 283 78-506 6-297 (304)
2 2qv7_A Diacylglycerol kinase D 100.0 5.4E-40 1.8E-44 337.0 25.6 282 80-505 24-314 (337)
3 2bon_A Lipid kinase; DAG kinas 100.0 1.3E-39 4.4E-44 333.9 23.8 280 80-505 29-315 (332)
4 2an1_A Putative kinase; struct 99.2 5.4E-11 1.8E-15 119.1 12.7 95 80-194 5-103 (292)
5 1yt5_A Inorganic polyphosphate 99.1 5.7E-10 1.9E-14 110.4 11.5 79 82-194 2-80 (258)
6 1u0t_A Inorganic polyphosphate 99.0 2E-09 6.8E-14 109.0 11.4 103 79-194 3-115 (307)
7 2i2c_A Probable inorganic poly 98.3 2.2E-06 7.4E-11 85.2 10.4 77 82-197 2-79 (272)
8 3afo_A NADH kinase POS5; alpha 97.0 0.0013 4.6E-08 68.6 8.3 99 78-193 39-154 (388)
9 1z0s_A Probable inorganic poly 95.5 0.042 1.4E-06 54.9 9.0 71 82-188 31-101 (278)
10 3pfn_A NAD kinase; structural 91.3 0.31 1.1E-05 50.4 6.9 35 146-187 107-141 (365)
11 1xmp_A PURE, phosphoribosylami 76.2 10 0.00035 35.0 8.6 91 79-189 9-100 (170)
12 3ors_A N5-carboxyaminoimidazol 70.4 19 0.00066 32.9 8.9 75 82-168 5-80 (163)
13 3jzd_A Iron-containing alcohol 70.3 9.4 0.00032 38.9 7.7 85 81-186 37-121 (358)
14 3oow_A Phosphoribosylaminoimid 69.8 36 0.0012 31.3 10.5 89 80-189 4-94 (166)
15 3hl0_A Maleylacetate reductase 69.7 11 0.00039 38.1 8.1 86 81-187 35-120 (353)
16 3kuu_A Phosphoribosylaminoimid 68.4 28 0.00095 32.2 9.6 78 79-168 10-89 (174)
17 4grd_A N5-CAIR mutase, phospho 67.8 34 0.0012 31.6 10.0 75 82-168 14-89 (173)
18 1o4v_A Phosphoribosylaminoimid 67.7 34 0.0012 31.9 10.1 89 81-189 13-102 (183)
19 2ywx_A Phosphoribosylaminoimid 66.7 17 0.00057 33.2 7.6 75 92-186 7-82 (157)
20 3lp6_A Phosphoribosylaminoimid 66.1 21 0.00072 33.0 8.3 87 82-189 9-96 (174)
21 1u11_A PURE (N5-carboxyaminoim 64.3 29 0.00098 32.3 8.9 76 81-168 22-98 (182)
22 4b4k_A N5-carboxyaminoimidazol 63.7 34 0.0011 31.9 9.2 78 78-167 19-98 (181)
23 3rg8_A Phosphoribosylaminoimid 63.1 38 0.0013 30.8 9.3 69 92-168 10-80 (159)
24 3uhj_A Probable glycerol dehyd 62.6 13 0.00045 38.3 7.0 88 81-189 53-141 (387)
25 3trh_A Phosphoribosylaminoimid 62.5 41 0.0014 31.0 9.4 75 82-168 8-83 (169)
26 1o2d_A Alcohol dehydrogenase, 61.5 50 0.0017 33.4 11.1 95 81-187 41-149 (371)
27 1sg6_A Pentafunctional AROM po 55.5 11 0.00037 38.8 4.9 102 80-193 36-148 (393)
28 2gru_A 2-deoxy-scyllo-inosose 51.8 23 0.00078 36.0 6.6 92 80-186 34-128 (368)
29 3iv7_A Alcohol dehydrogenase I 50.3 27 0.00091 35.6 6.8 83 81-186 38-120 (364)
30 1oj7_A Hypothetical oxidoreduc 49.4 34 0.0012 35.1 7.5 101 81-193 51-168 (408)
31 3okf_A 3-dehydroquinate syntha 48.5 40 0.0014 34.8 7.8 96 79-186 61-157 (390)
32 3emu_A Leucine rich repeat and 46.3 7 0.00024 34.8 1.5 33 16-48 79-112 (161)
33 3ezz_A Dual specificity protei 45.7 8.7 0.0003 33.0 2.0 33 16-48 73-106 (144)
34 3qbe_A 3-dehydroquinate syntha 44.7 64 0.0022 33.0 8.6 93 81-186 44-137 (368)
35 3s4e_A Dual specificity protei 44.1 7.5 0.00026 33.6 1.3 48 16-63 73-128 (144)
36 3ce9_A Glycerol dehydrogenase; 43.4 64 0.0022 32.2 8.3 89 81-190 35-124 (354)
37 2j16_A SDP-1, tyrosine-protein 41.5 9.4 0.00032 35.1 1.6 32 17-48 110-142 (182)
38 3bfj_A 1,3-propanediol oxidore 41.5 87 0.003 31.7 9.1 102 81-193 34-151 (387)
39 1jq5_A Glycerol dehydrogenase; 40.4 49 0.0017 33.3 6.9 86 81-186 32-118 (370)
40 3clh_A 3-dehydroquinate syntha 37.3 50 0.0017 33.1 6.4 93 80-187 26-120 (343)
41 1ta9_A Glycerol dehydrogenase; 35.4 68 0.0023 33.5 7.2 85 81-186 92-177 (450)
42 1vlj_A NADH-dependent butanol 35.3 1E+02 0.0036 31.4 8.5 100 81-192 44-159 (407)
43 2nt2_A Protein phosphatase sli 34.0 13 0.00044 32.0 1.2 33 16-48 73-106 (145)
44 2h31_A Multifunctional protein 33.5 90 0.0031 32.7 7.6 84 81-186 266-352 (425)
45 1ujn_A Dehydroquinate synthase 33.0 72 0.0025 32.0 6.7 90 80-186 28-118 (348)
46 3ox4_A Alcohol dehydrogenase 2 32.5 99 0.0034 31.4 7.7 98 80-190 31-144 (383)
47 1pfk_A Phosphofructokinase; tr 32.1 1.3E+02 0.0044 30.2 8.3 40 146-193 93-132 (320)
48 3rgo_A Protein-tyrosine phosph 31.0 11 0.00038 32.5 0.2 33 16-48 81-114 (157)
49 1zxx_A 6-phosphofructokinase; 28.9 1.2E+02 0.0043 30.3 7.6 40 146-193 92-131 (319)
50 1wrm_A Dual specificity phosph 27.5 17 0.0006 32.0 0.9 33 16-48 75-108 (165)
51 2hig_A 6-phospho-1-fructokinas 27.4 1.2E+02 0.0042 32.2 7.5 45 146-193 188-233 (487)
52 1zzw_A Dual specificity protei 27.3 18 0.00062 31.1 1.0 33 16-48 75-108 (149)
53 2hcm_A Dual specificity protei 26.8 19 0.00066 31.6 1.0 32 17-48 82-114 (164)
54 2hxp_A Dual specificity protei 25.6 23 0.00078 31.0 1.3 32 17-48 78-110 (155)
55 2esb_A Dual specificity protei 25.1 22 0.00074 32.3 1.1 32 17-48 90-122 (188)
56 2r0b_A Serine/threonine/tyrosi 24.7 25 0.00087 30.3 1.4 32 17-48 83-115 (154)
57 1rrm_A Lactaldehyde reductase; 24.7 1.6E+02 0.0055 29.6 7.7 99 81-192 32-148 (386)
58 2g6z_A Dual specificity protei 24.4 26 0.00089 32.9 1.5 33 16-48 75-108 (211)
59 3hno_A Pyrophosphate-dependent 21.5 2.2E+02 0.0075 29.6 8.0 46 146-193 103-148 (419)
60 1xah_A Sadhqs, 3-dehydroquinat 21.5 68 0.0023 32.1 4.0 90 81-186 32-124 (354)
61 4erc_A Dual specificity protei 20.6 22 0.00075 30.3 0.1 31 17-47 81-112 (150)
62 2oud_A Dual specificity protei 20.4 29 0.00098 31.1 0.9 33 16-48 79-112 (177)
63 1yz4_A DUSP15, dual specificit 20.2 38 0.0013 29.5 1.6 32 17-48 77-109 (160)
64 2x9a_A Attachment protein G3P; 20.1 25 0.00086 27.2 0.3 12 149-160 39-50 (65)
65 4a3s_A 6-phosphofructokinase; 20.1 2.1E+02 0.0072 28.5 7.3 40 146-193 92-131 (319)
No 1
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=100.00 E-value=1.4e-44 Score=366.59 Aligned_cols=283 Identities=19% Similarity=0.178 Sum_probs=202.0
Q ss_pred CCCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcC
Q 010507 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (508)
Q Consensus 78 ~~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GG 156 (508)
.+|++++||+||.||++++.+.++++++.|.+.+. +++ +.|++++|++++++++. ++.+.||++||
T Consensus 6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~-------~~t~~~~~a~~~~~~~~------~~~d~vv~~GG 72 (304)
T 3s40_A 6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHI-------LHTKEQGDATKYCQEFA------SKVDLIIVFGG 72 (304)
T ss_dssp CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEE-------EECCSTTHHHHHHHHHT------TTCSEEEEEEC
T ss_pred CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEE-------EEccCcchHHHHHHHhh------cCCCEEEEEcc
Confidence 45889999999999999998999999999987653 333 46788999999998753 37799999999
Q ss_pred chhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCccchH
Q 010507 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFAWK 236 (508)
Q Consensus 157 DGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~~ 236 (508)
|||||+|++++.+. ...+|||+||+||+|||||+||+ |.++.
T Consensus 73 DGTl~~v~~~l~~~-----~~~~~l~iiP~Gt~N~~ar~lg~---------------------------------~~~~~ 114 (304)
T 3s40_A 73 DGTVFECTNGLAPL-----EIRPTLAIIPGGTCNDFSRTLGV---------------------------------PQNIA 114 (304)
T ss_dssp HHHHHHHHHHHTTC-----SSCCEEEEEECSSCCHHHHHTTC---------------------------------CSSHH
T ss_pred chHHHHHHHHHhhC-----CCCCcEEEecCCcHHHHHHHcCC---------------------------------CccHH
Confidence 99999999999874 25799999999999999999999 76766
Q ss_pred HHHHHHHHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccceEEeEEeeeehHHH
Q 010507 237 SAVKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQV 316 (508)
Q Consensus 237 ~av~~il~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~F~Ny~sIG~DA~V 316 (508)
++++. +.+|+.+.+|+|++ + ++||+|++|+||||+|
T Consensus 115 ~a~~~----i~~g~~~~iDlg~v----------------------------------~------~~~F~~~~~~G~da~v 150 (304)
T 3s40_A 115 EAAKL----ITKEHVKPVDVAKA----------------------------------N------GQHFLNFWGIGLVSEV 150 (304)
T ss_dssp HHHHH----HTTCCEEEEEEEEE----------------------------------T------TEEESSEEEEC-----
T ss_pred HHHHH----HHhCCeEEEEEEEE----------------------------------C------CEEEEEEEeehHHHHH
Confidence 65554 45689999997542 1 4799999999999999
Q ss_pred hhhhhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEec
Q 010507 317 AYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALN 396 (508)
Q Consensus 317 a~~f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N 396 (508)
++.++..++ .+ .|+++|...++++++.+++ +++++. .| ++.++ .++..++++|
T Consensus 151 ~~~~~~~~k-------~~-~G~~~Y~~~~l~~l~~~~~-------------~~~~i~---~d-g~~~~--~~~~~v~v~N 203 (304)
T 3s40_A 151 SNNIDAEEK-------AK-LGKIGYYLSTIRTVKNAET-------------FPVKIT---YD-GQVYE--DEAVLVMVGN 203 (304)
T ss_dssp ---------------------CHHHHTTTC------CC-------------EEEEEE---ET-TEEEE--EEEEEEEEEC
T ss_pred HHhcCHHHh-------hc-CCchHHHHHHHHHHhhcCC-------------ceEEEE---EC-CEEEE--eEEEEEEEEC
Confidence 999886543 23 4999999998888754433 334432 22 35443 3367889999
Q ss_pred CCCCCccccccCCCCchhhcccCCcccCCCCCcEEEEEeCCh--hHHHHHHHhhh------CCeEEEeeeeEEEEecCCC
Q 010507 397 LHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQG--WHASFVMVELI------SAKHIAQAAAIRLEFRGGE 468 (508)
Q Consensus 397 ~~~ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~~--~~~~~l~~~l~------~g~~l~qa~~i~I~~~~~~ 468 (508)
.++|+||..++ |+|+++||+|||++++.. +.+..++..+. ...++.++++++|+++
T Consensus 204 ~~~~Ggg~~~~-------------p~a~~~DG~Ldv~~v~~~~~~~l~~l~~~~~~g~~~~~~v~~~~~~~v~i~~~--- 267 (304)
T 3s40_A 204 GEYLGGIPSFI-------------PNVKCDDGTLDIFVVKSTGIQAFKDYIGKKLFEDSNENDIFHVKAKSIHIETE--- 267 (304)
T ss_dssp SSEETTEECSS-------------TTCCTTSSCEEEEEEETTCHHHHHHHTTCCCSSCCCTTTEEEEEESEEEEEES---
T ss_pred CCcCCCCcccC-------------CCCcCCCCEEEEEEEccCCHHHHHHHHHHHhcCCCCCCcEEEEEccEEEEEeC---
Confidence 99999998876 899999999999999873 23333332222 2356789999999987
Q ss_pred cccceEEecCcccCCCCCCCCCeEEEEEEEeccccccc
Q 010507 469 WKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMIS 506 (508)
Q Consensus 469 ~~~~~~qiDGE~~~~~~~~~~~~~veI~~~p~~~~~~~ 506 (508)
+++++|+|||++.. ++++|+..|.+.-++.
T Consensus 268 -~~~~~~~DGE~~~~-------~p~~i~v~p~al~v~~ 297 (304)
T 3s40_A 268 -EEKEVDTDGESSLH-------TPCQIELLQGHFTMIY 297 (304)
T ss_dssp -SCCEEEEC--CCEE-------SSEEEEEEEEEEEEEC
T ss_pred -CCcEEEeCCCCCCC-------ceEEEEEECCeEEEEe
Confidence 78999999999853 3489999998776654
No 2
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=100.00 E-value=5.4e-40 Score=336.98 Aligned_cols=282 Identities=17% Similarity=0.130 Sum_probs=208.8
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
|++++||+||.||++++.+.++++++.|.+.+. ++.. +.|+..+++.++++++. .++.+.||++|||||
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~-~~~~-----~~t~~~~~a~~~~~~~~-----~~~~d~vvv~GGDGT 92 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAGY-ETSA-----YATEKIGDATLEAERAM-----HENYDVLIAAGGDGT 92 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTE-EEEE-----EECCSTTHHHHHHHHHT-----TTTCSEEEEEECHHH
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcCC-eEEE-----EEecCcchHHHHHHHHh-----hcCCCEEEEEcCchH
Confidence 567999999999999888889999999987653 3322 34567788888877653 246799999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCccchHHHH
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFAWKSAV 239 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~~~av 239 (508)
|++|++++.+. ...+|||+||+||+|||||+||+ |.++.+++
T Consensus 93 v~~v~~~l~~~-----~~~~pl~iIP~GT~N~lAr~Lg~---------------------------------~~~~~~al 134 (337)
T 2qv7_A 93 LNEVVNGIAEK-----PNRPKLGVIPMGTVNDFGRALHI---------------------------------PNDIMGAL 134 (337)
T ss_dssp HHHHHHHHTTC-----SSCCEEEEEECSSCCHHHHHTTC---------------------------------CSSHHHHH
T ss_pred HHHHHHHHHhC-----CCCCcEEEecCCcHhHHHHHcCC---------------------------------CCCHHHHH
Confidence 99999999653 36899999999999999999999 77766666
Q ss_pred HHHHHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccceEEeEEeeeehHHHhhh
Q 010507 240 KRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYG 319 (508)
Q Consensus 240 ~~il~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~~F~Ny~sIG~DA~Va~~ 319 (508)
+.++ +|..+.+|+|++ + +++|+|++|+||||+|++.
T Consensus 135 ~~i~----~g~~~~iD~g~v----------------------------------~------~r~fl~~~~~G~~a~v~~~ 170 (337)
T 2qv7_A 135 DVII----EGHSTKVDIGKM----------------------------------N------NRYFINLAAGGQLTQVSYE 170 (337)
T ss_dssp HHHH----HTCEEEEEEEEE----------------------------------T------TEEESSEEEEECBCC----
T ss_pred HHHH----cCCcEEEEEEEE----------------------------------C------CEEEEEEeeecccHHHHHH
Confidence 5544 588899997542 1 3799999999999999999
Q ss_pred hhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEecCCC
Q 010507 320 FHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHN 399 (508)
Q Consensus 320 f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N~~~ 399 (508)
++..++ .++ |+++|...+++.++..+ .+++++. .+ ++.++ .+...+++.|.++
T Consensus 171 ~~~~~k-------~~~-G~~~Y~~~~l~~l~~~~-------------~~~~~i~---~d-g~~~~--~~~~~v~v~n~~~ 223 (337)
T 2qv7_A 171 TPSKLK-------SIV-GPFAYYIKGFEMLPQMK-------------AVDLRIE---YD-GNVFQ--GEALLFFLGLTNS 223 (337)
T ss_dssp -----------------CGGGSCCCTTTTGGGBC-------------CEEEEEE---ET-TEEEE--EEEEEEEEESSCC
T ss_pred hhHHHH-------hcc-ChHHHHHHHHHHHHhCC-------------CccEEEE---EC-CEEEE--eeEEEEEEECCCC
Confidence 877653 233 99999988888765332 2334432 23 34433 3456778999999
Q ss_pred CCccccccCCCCchhhcccCCcccCCCCCcEEEEEeCC--hhHHHHHHHhhhCC-------eEEEeeeeEEEEecCCCcc
Q 010507 400 YASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQ--GWHASFVMVELISA-------KHIAQAAAIRLEFRGGEWK 470 (508)
Q Consensus 400 ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~--~~~~~~l~~~l~~g-------~~l~qa~~i~I~~~~~~~~ 470 (508)
|+||..++ |.|+++||+||+++++. .+.+..++..+..| .++.++++++|+.. +
T Consensus 224 ~gGg~~i~-------------P~a~~~DG~ldv~~v~~~~~~~l~~~~~~v~~g~~~~~~~v~~~~~~~i~i~~~----~ 286 (337)
T 2qv7_A 224 MAGFEKLV-------------PDAKLDDGYFTLIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSF----T 286 (337)
T ss_dssp CSSCSCSS-------------TTCCSSSSCEEEEEEECCCHHHHHHHHHHHTTTCGGGSTTEEEEEESEEEEECS----S
T ss_pred CCCCCccC-------------CCCcCCCCeEEEEEEccCCHHHHHHHHHHHhcCCccCCCCEEEEEeeEEEEEEC----C
Confidence 99998886 89999999999999987 45555556556554 45678999999875 6
Q ss_pred cceEEecCcccCCCCCCCCCeEEEEEEEecccccc
Q 010507 471 DAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMI 505 (508)
Q Consensus 471 ~~~~qiDGE~~~~~~~~~~~~~veI~~~p~~~~~~ 505 (508)
++++|+|||++.. ..++|+..|.+.-++
T Consensus 287 ~~~~~iDGE~~~~-------~~i~i~v~p~~l~v~ 314 (337)
T 2qv7_A 287 DLQLNVDGEYGGK-------LPANFLNLERHIDVF 314 (337)
T ss_dssp CCEEEETTEEEEE-------SCEEEEEEEEEEEEE
T ss_pred CCeEEECCCcCCC-------CcEEEEEEcCeEEEE
Confidence 8999999999863 248888888776555
No 3
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=100.00 E-value=1.3e-39 Score=333.94 Aligned_cols=280 Identities=19% Similarity=0.204 Sum_probs=204.3
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
|++++||+||.||++ +.++++.+.|.+.+. +.+ ..|++.+++.++++++. ..+.+.|||+||||
T Consensus 29 ~~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~-------~~t~~~~~~~~~~~~~~-----~~~~d~vvv~GGDG 93 (332)
T 2bon_A 29 FPASLLILNGKSTDN---LPLREAIMLLREEGMTIHV-------RVTWEKGDAARYVEEAR-----KFGVATVIAGGGDG 93 (332)
T ss_dssp -CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEE-------EECCSTTHHHHHHHHHH-----HHTCSEEEEEESHH
T ss_pred cceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEE-------EEecCcchHHHHHHHHH-----hcCCCEEEEEccch
Confidence 678999999999976 466778888876653 333 24556778888776543 24679999999999
Q ss_pred hHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhhhhCCccceeeeeeehhhhhhhccccccccccccCCCCccchHHH
Q 010507 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWVCFSFVFILIFPIIYLYCLFSCCFECLIQGGSFPFAWKSA 238 (508)
Q Consensus 159 Tv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~~~a 238 (508)
||++|++++.+.+. ...+|||+||+||+|||||++|| |.++.++
T Consensus 94 Tl~~v~~~l~~~~~---~~~~plgiiP~Gt~N~fa~~l~i---------------------------------~~~~~~a 137 (332)
T 2bon_A 94 TINEVSTALIQCEG---DDIPALGILPLGTANDFATSVGI---------------------------------PEALDKA 137 (332)
T ss_dssp HHHHHHHHHHHCCS---SCCCEEEEEECSSSCHHHHHTTC---------------------------------CSSHHHH
T ss_pred HHHHHHHHHhhccc---CCCCeEEEecCcCHHHHHHhcCC---------------------------------CCCHHHH
Confidence 99999999985321 36789999999999999999999 7676666
Q ss_pred HHHHHHHhhcCCeeeeecceeEeecCCCCccCCCCCCCCCcccccccCccccCCCCcccccccc-eEEeEEeeeehHHHh
Q 010507 239 VKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEG-VFYNYFSIGMDAQVA 317 (508)
Q Consensus 239 v~~il~~i~~g~~~~iD~w~v~v~~p~~~~~~~p~~~~~~~~~~~d~G~~~~g~~~~~~~~~~~-~F~Ny~sIG~DA~Va 317 (508)
++.++ +|..+++|+|++ + ++ +|+|++|+||||+|+
T Consensus 138 l~~i~----~g~~~~iDlg~v----------------------------------~------~r~~fl~~~~~G~da~v~ 173 (332)
T 2bon_A 138 LKLAI----AGDAIAIDMAQV----------------------------------N------KQTCFINMATGGFGTRIT 173 (332)
T ss_dssp HHHHH----HSEEEEEEEEEE----------------------------------T------TSCEESSEEEEEEEEEC-
T ss_pred HHHHH----cCCeEEeeEEEE----------------------------------C------CceEEEEEEeECccHHHH
Confidence 66554 588899997542 1 24 999999999999999
Q ss_pred hhhhhccccCCCccccCCCcchhhHHHHHhhhccccCcCCCCccccccccEEEEEEeeecCCceEEEecCcceEEEEecC
Q 010507 318 YGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNL 397 (508)
Q Consensus 318 ~~f~~~R~~~p~l~~~rl~nkl~Y~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~i~~v~~~~~e~i~~~~~~~~lvv~N~ 397 (508)
++++..++ .++ |+++|...+++.++..++ +++++. .+ ++.++ .+...++++|.
T Consensus 174 ~~~~~~~k-------~~~-G~~~Y~~~~l~~l~~~~~-------------~~~~i~---~d-g~~~~--~~~~~v~v~N~ 226 (332)
T 2bon_A 174 TETPEKLK-------AAL-GSVSYIIHGLMRMDTLQP-------------DRCEIR---GE-NFHWQ--GDALVIGIGNG 226 (332)
T ss_dssp ----------------CC-HHHHHHHHHTSCEEEEEC-------------EEEEEE---ET-TEEEE--EEESEEEEESS
T ss_pred HHhhHHhH-------hcc-cHHHHHHHHHHHHhhCCC-------------eeEEEE---EC-CEEEE--EEEEEEEEECC
Confidence 88765442 334 999999998887654332 334432 23 34443 33567788999
Q ss_pred CCCCccccccCCCCchhhcccCCcccCCCCCcEEEEEeCChhHHHHHHHhhhCC-----eEEEeeeeEEEEecCCCcccc
Q 010507 398 HNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQGWHASFVMVELISA-----KHIAQAAAIRLEFRGGEWKDA 472 (508)
Q Consensus 398 ~~ygGG~~~wg~~~~~~~~~~g~~~a~~dDGlLEVv~l~~~~~~~~l~~~l~~g-----~~l~qa~~i~I~~~~~~~~~~ 472 (508)
++|+||..+| |.++++||+||+++++...+++.++..+..| .++.++++++|+.+ +++
T Consensus 227 ~~~ggg~~i~-------------P~a~~~DG~Ldv~iv~~~~~~l~~~~~~~~g~~~~~v~~~~~~~i~I~~~----~~~ 289 (332)
T 2bon_A 227 RQAGGGQQLC-------------PNALINDGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAP----HDI 289 (332)
T ss_dssp SCBTTTBCSC-------------TTCCTTSSCEEEEEECCSSCCHHHHHHHHTTCCCTTEEEEEESEEEEEEE----EEE
T ss_pred CccCCCcccC-------------CCCCCCCCeEEEEEECCHHHHHHHHHHHHcCCCCCcEEEEEeeEEEEEEC----CCC
Confidence 9999998887 8999999999999998753344444455544 45678999999975 789
Q ss_pred eEEecCcccCCCCCCCCCeEEEEEEEecccccc
Q 010507 473 FMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMI 505 (508)
Q Consensus 473 ~~qiDGE~~~~~~~~~~~~~veI~~~p~~~~~~ 505 (508)
++|+|||++. .+.++|+..|.+.-++
T Consensus 290 ~~~iDGE~~~-------~~~~~i~v~p~al~vl 315 (332)
T 2bon_A 290 TFNLDGEPLS-------GQNFHIEILPAALRCR 315 (332)
T ss_dssp EEEETTEEEE-------EEEEEEEEEEEEEEEE
T ss_pred eEEecCCCCC-------CceEEEEEECCeeEEE
Confidence 9999999985 3569999999776554
No 4
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=99.22 E-value=5.4e-11 Score=119.14 Aligned_cols=95 Identities=18% Similarity=0.145 Sum_probs=56.0
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHH----HccchhhcccCCccEEEEEc
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLA----ELGDFCAKDTRQKMRIVVAG 155 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la----~~~~~~~~~~~~~~~ivv~G 155 (508)
|+++++|+||.++. ..+.++++.+.|.+.+. ++.... + .+..+. ..... .....+.|.||++|
T Consensus 5 mkki~ii~np~~~~--~~~~~~~i~~~l~~~g~-~v~~~~-----~----~~~~~~~~~~~~~~~-~~~~~~~D~vi~~G 71 (292)
T 2an1_A 5 FKCIGIVGHPRHPT--ALTTHEMLYRWLCDQGY-EVIVEQ-----Q----IAHELQLKNVPTGTL-AEIGQQADLAVVVG 71 (292)
T ss_dssp CCEEEEECC---------CHHHHHHHHHHHTTC-EEEEEH-----H----HHHHTTCSSCCEECH-HHHHHHCSEEEECS
T ss_pred CcEEEEEEcCCCHH--HHHHHHHHHHHHHHCCC-EEEEec-----c----hhhhcccccccccch-hhcccCCCEEEEEc
Confidence 68899999998753 34677888888877653 332110 0 011110 00000 00013569999999
Q ss_pred CchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhh
Q 010507 156 GDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSR 194 (508)
Q Consensus 156 GDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar 194 (508)
||||++++++.+.+. ..|.+|| |+||.|+|++
T Consensus 72 GDGT~l~a~~~~~~~------~~P~lGI-~~Gt~gfla~ 103 (292)
T 2an1_A 72 GDGNMLGAARTLARY------DINVIGI-NRGNLGFLTD 103 (292)
T ss_dssp CHHHHHHHHHHHTTS------SCEEEEB-CSSSCCSSCC
T ss_pred CcHHHHHHHHHhhcC------CCCEEEE-ECCCcccCCc
Confidence 999999999999763 2344666 8999888886
No 5
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=99.07 E-value=5.7e-10 Score=110.39 Aligned_cols=79 Identities=23% Similarity=0.274 Sum_probs=55.1
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhHH
Q 010507 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVG 161 (508)
Q Consensus 82 ~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv~ 161 (508)
++.+|+||.||.+ ..++.+++.+.|. .+++. + . + +. ...+.|.||++|||||++
T Consensus 2 ki~ii~Np~~~~~-~~~~~~~i~~~l~---~~~~~--------~-~--~------~~-----~~~~~D~vv~~GGDGTll 55 (258)
T 1yt5_A 2 KIAILYREEREKE-GEFLKEKISKEHE---VIEFG--------E-A--N------AP-----GRVTADLIVVVGGDGTVL 55 (258)
T ss_dssp EEEEEECGGGHHH-HHHHHHHHTTTSE---EEEEE--------E-S--S------SC-----SCBCCSEEEEEECHHHHH
T ss_pred EEEEEEeCCCchH-HHHHHHHHHHHhc---CCcee--------c-c--c------cc-----ccCCCCEEEEEeCcHHHH
Confidence 6899999999976 6667777776665 23321 1 1 1 11 124679999999999999
Q ss_pred HHHHHHhhcccCCCCCCCcEEEeeCCCCcchhh
Q 010507 162 WVLGSVGELNKQGREPVPPVAIIPLGTGNDLSR 194 (508)
Q Consensus 162 ~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar 194 (508)
++++.+.. ..|.+|| ++||.+.|+.
T Consensus 56 ~~a~~~~~-------~~PilGI-n~G~~Gfl~~ 80 (258)
T 1yt5_A 56 KAAKKAAD-------GTPMVGF-KAGRLGFLTS 80 (258)
T ss_dssp HHHTTBCT-------TCEEEEE-ESSSCCSSCC
T ss_pred HHHHHhCC-------CCCEEEE-ECCCCCccCc
Confidence 99988753 1334776 5999966663
No 6
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=98.97 E-value=2e-09 Score=109.03 Aligned_cols=103 Identities=14% Similarity=0.233 Sum_probs=58.1
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeecccccee--ecch------h-HHHHHHHccchhhcccCCc
Q 010507 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFV--QYGL------A-CLEKLAELGDFCAKDTRQK 148 (508)
Q Consensus 79 ~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~--T~~~------~-~a~~la~~~~~~~~~~~~~ 148 (508)
+|+++++|+||.++. ..+..+++.+.|.+++. +.+......... .... + +.+.+++.. ...++.
T Consensus 3 ~m~ki~iI~n~~~~~--~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~ 76 (307)
T 1u0t_A 3 AHRSVLLVVHTGRDE--ATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQ----HAADGC 76 (307)
T ss_dssp --CEEEEEESSSGGG--GSHHHHHHHHHHHTTTCEEEEEC---------------------------------------C
T ss_pred CCCEEEEEEeCCCHH--HHHHHHHHHHHHHHCCCEEEEecchhhhhhccccccccccccccccccccccc----ccccCC
Confidence 367899999999864 34677888888887653 222211110000 0000 0 111111110 012467
Q ss_pred cEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchhh
Q 010507 149 MRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSR 194 (508)
Q Consensus 149 ~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~ar 194 (508)
+.||++|||||+..+++.+... ..|.+|| ++||.|.|+.
T Consensus 77 d~vi~~GGDGT~l~a~~~~~~~------~~pvlgi-~~G~~gfl~~ 115 (307)
T 1u0t_A 77 ELVLVLGGDGTFLRAAELARNA------SIPVLGV-NLGRIGFLAE 115 (307)
T ss_dssp CCEEEEECHHHHHHHHHHHHHH------TCCEEEE-ECSSCCSSCS
T ss_pred CEEEEEeCCHHHHHHHHHhccC------CCCEEEE-eCCCCccCcc
Confidence 9999999999999999999763 2344664 8999999884
No 7
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=98.30 E-value=2.2e-06 Score=85.24 Aligned_cols=77 Identities=13% Similarity=0.150 Sum_probs=55.1
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhHH
Q 010507 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVG 161 (508)
Q Consensus 82 ~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv~ 161 (508)
++.+|+||. ....+..+++.+.|.+.+. ++. .++.|.||++|||||+.
T Consensus 2 ki~ii~n~~---~~~~~~~~~l~~~l~~~g~-~v~----------------------------~~~~D~vv~lGGDGT~l 49 (272)
T 2i2c_A 2 KYMITSKGD---EKSDLLRLNMIAGFGEYDM-EYD----------------------------DVEPEIVISIGGDGTFL 49 (272)
T ss_dssp EEEEEECCS---HHHHHHHHHHHHHHTTSSC-EEC----------------------------SSSCSEEEEEESHHHHH
T ss_pred EEEEEECCC---HHHHHHHHHHHHHHHHCCC-EeC----------------------------CCCCCEEEEEcCcHHHH
Confidence 688999963 3445677788888876542 220 13579999999999999
Q ss_pred HHHHHHhhcccCCCCCCCc-EEEeeCCCCcchhhhhC
Q 010507 162 WVLGSVGELNKQGREPVPP-VAIIPLGTGNDLSRSFG 197 (508)
Q Consensus 162 ~vl~~l~~~~~~~~~~~~p-l~iiPlGTgNd~ar~lg 197 (508)
.+++.+... ...+| +|| |+|| |+|+..+.
T Consensus 50 ~aa~~~~~~-----~~~~PilGI-n~G~-lgfl~~~~ 79 (272)
T 2i2c_A 50 SAFHQYEER-----LDEIAFIGI-HTGH-LGFYADWR 79 (272)
T ss_dssp HHHHHTGGG-----TTTCEEEEE-ESSS-CCSSCCBC
T ss_pred HHHHHHhhc-----CCCCCEEEE-eCCC-CCcCCcCC
Confidence 999998752 12566 666 9999 66777664
No 8
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.0013 Score=68.64 Aligned_cols=99 Identities=20% Similarity=0.166 Sum_probs=56.1
Q ss_pred CCCCeEEEEEcCCCCCCChhhHHHHHHHHhcccC-eEEEeeccccceeecchhHHHHHHHcc----------c------h
Q 010507 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQ-VFDLSEVKPHEFVQYGLACLEKLAELG----------D------F 140 (508)
Q Consensus 78 ~~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~-v~~l~~~~~~~~~T~~~~~a~~la~~~----------~------~ 140 (508)
.+++.+++|.||.. ....+...++.+.|..+. .+++.. . ...+..+.... . .
T Consensus 39 ~~~k~V~II~n~~~--~~~~~~~~~l~~~L~~~~~gi~V~v-------e--~~~a~~l~~~~~~~~~~~~~~~~~~~~~~ 107 (388)
T 3afo_A 39 NPLQNVYITKKPWT--PSTREAMVEFITHLHESYPEVNVIV-------Q--PDVAEEISQDFKSPLENDPNRPHILYTGP 107 (388)
T ss_dssp SCCCEEEEEECTTC--HHHHHHHHHHHHHHHHHCTTCEEEC-------C--HHHHHHHHTTCCSCGGGCTTSCEEEEECC
T ss_pred CCCcEEEEEEeCCC--HHHHHHHHHHHHHHHHhCCCeEEEE-------e--Cchhhhhhhhccccccccccccccccccc
Confidence 35789999999874 234456677777776541 122211 1 11112221110 0 0
Q ss_pred hhcccCCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchh
Q 010507 141 CAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (508)
Q Consensus 141 ~~~~~~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~a 193 (508)
......+.|.||+.|||||+..++..+... ..+||--|++||-+-|+
T Consensus 108 ~~~~~~~~DlVIvlGGDGTlL~aa~~~~~~------~vpPiLGIN~G~lGFLt 154 (388)
T 3afo_A 108 EQDIVNRTDLLVTLGGDGTILHGVSMFGNT------QVPPVLAFALGTLGFLS 154 (388)
T ss_dssp HHHHHHHCSEEEEEESHHHHHHHHHTTTTS------CCCCEEEEECSSCCSSC
T ss_pred hhhcccCCCEEEEEeCcHHHHHHHHHhccc------CCCeEEEEECCCcccCC
Confidence 000012468999999999999999887652 23344444999875554
No 9
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=95.47 E-value=0.042 Score=54.87 Aligned_cols=71 Identities=24% Similarity=0.313 Sum_probs=44.9
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhHH
Q 010507 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVG 161 (508)
Q Consensus 82 ~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv~ 161 (508)
++.++.|+..- .+++.+.|.++++ ++.... .. +.. ..+.|.||+.|||||+=
T Consensus 31 ki~iv~~~~~~-------~~~l~~~L~~~g~-~v~~~~-------~~------~~~-------~~~~DlvIvlGGDGT~L 82 (278)
T 1z0s_A 31 RAAVVYKTDGH-------VKRIEEALKRLEV-EVELFN-------QP------SEE-------LENFDFIVSVGGDGTIL 82 (278)
T ss_dssp EEEEEESSSTT-------HHHHHHHHHHTTC-EEEEES-------SC------CGG-------GGGSSEEEEEECHHHHH
T ss_pred EEEEEeCCcHH-------HHHHHHHHHHCCC-EEEEcc-------cc------ccc-------cCCCCEEEEECCCHHHH
Confidence 58899997654 5667777776543 222110 00 000 23568999999999998
Q ss_pred HHHHHHhhcccCCCCCCCcEEEeeCCC
Q 010507 162 WVLGSVGELNKQGREPVPPVAIIPLGT 188 (508)
Q Consensus 162 ~vl~~l~~~~~~~~~~~~pl~iiPlGT 188 (508)
.++..+.. . +||--|.+||
T Consensus 83 ~aa~~~~~-------~-~PilGIN~G~ 101 (278)
T 1z0s_A 83 RILQKLKR-------C-PPIFGINTGR 101 (278)
T ss_dssp HHHTTCSS-------C-CCEEEEECSS
T ss_pred HHHHHhCC-------C-CcEEEECCCC
Confidence 88755532 3 7777778884
No 10
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=91.32 E-value=0.31 Score=50.37 Aligned_cols=35 Identities=37% Similarity=0.526 Sum_probs=26.8
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlG 187 (508)
+..|.||+.|||||+=.++..+.. ..+||-=|-+|
T Consensus 107 ~~~DlvI~lGGDGT~L~aa~~~~~-------~~~PvlGiN~G 141 (365)
T 3pfn_A 107 NQIDFIICLGGDGTLLYASSLFQG-------SVPPVMAFHLG 141 (365)
T ss_dssp TTCSEEEEESSTTHHHHHHHHCSS-------SCCCEEEEESS
T ss_pred cCCCEEEEEcChHHHHHHHHHhcc-------CCCCEEEEcCC
Confidence 467999999999999988876644 46676555565
No 11
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=76.15 E-value=10 Score=35.00 Aligned_cols=91 Identities=18% Similarity=0.182 Sum_probs=58.3
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCc
Q 010507 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (508)
Q Consensus 79 ~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGD 157 (508)
.|+|.+.|+= |+..-..+.++....|...++ ||+.....|. .+....++++++.. ..-...|.++||.
T Consensus 9 ~~~~~V~Iim---GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR----~p~~l~~~~~~a~~----~g~~ViIa~AG~a 77 (170)
T 1xmp_A 9 HMKSLVGVIM---GSTSDWETMKYACDILDELNIPYEKKVVSAHR----TPDYMFEYAETARE----RGLKVIIAGAGGA 77 (170)
T ss_dssp --CCSEEEEE---SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHTTT----TTCCEEEEEEESS
T ss_pred cCCCcEEEEE---CcHHHHHHHHHHHHHHHHcCCCEEEEEEeccC----CHHHHHHHHHHHHh----CCCcEEEEECCch
Confidence 4566555543 444444566777777777776 9998877765 46677777766531 1234678889999
Q ss_pred hhHHHHHHHHhhcccCCCCCCCcEEEeeCCCC
Q 010507 158 GTVGWVLGSVGELNKQGREPVPPVAIIPLGTG 189 (508)
Q Consensus 158 GTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTg 189 (508)
+-+--|+.++. ..|+--+|.-++
T Consensus 78 a~LpgvvA~~t---------~~PVIgVP~~~~ 100 (170)
T 1xmp_A 78 AHLPGMVAAKT---------NLPVIGVPVQSK 100 (170)
T ss_dssp CCHHHHHHTTC---------CSCEEEEEECCT
T ss_pred hhhHHHHHhcc---------CCCEEEeeCCCC
Confidence 99999987774 345555555444
No 12
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=70.44 E-value=19 Score=32.93 Aligned_cols=75 Identities=15% Similarity=0.181 Sum_probs=51.3
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 82 ~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
++.||.=..| -..+.++....|...++ ||+.....|. .+....++++++.. ..-...|.++|+.+-+
T Consensus 5 ~V~Iimgs~S----D~~v~~~a~~~l~~~gi~~ev~V~SaHR----~p~~~~~~~~~a~~----~g~~ViIa~AG~aa~L 72 (163)
T 3ors_A 5 KVAVIMGSSS----DWKIMQESCNMLDYFEIPYEKQVVSAHR----TPKMMVQFASEARE----RGINIIIAGAGGAAHL 72 (163)
T ss_dssp CEEEEESCGG----GHHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHTTT----TTCCEEEEEEESSCCH
T ss_pred eEEEEECcHH----HHHHHHHHHHHHHHcCCCEEEEEECCcC----CHHHHHHHHHHHHh----CCCcEEEEECCchhhh
Confidence 3555553333 34456666777777766 9998877765 56777777776531 1234688889999999
Q ss_pred HHHHHHHh
Q 010507 161 GWVLGSVG 168 (508)
Q Consensus 161 ~~vl~~l~ 168 (508)
--|+.++.
T Consensus 73 pgvvA~~t 80 (163)
T 3ors_A 73 PGMVASLT 80 (163)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcc
Confidence 99998884
No 13
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=70.31 E-value=9.4 Score=38.87 Aligned_cols=85 Identities=15% Similarity=0.153 Sum_probs=51.0
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
++++|+..+.. ..+.+++.+.|....+.-+....|.. .....++.++.+. ..+.|.||++|| |++
T Consensus 37 ~r~liVtd~~~-----~~~~~~v~~~L~~~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gsv 101 (358)
T 3jzd_A 37 KRALVLCTPNQ-----QAEAERIADLLGPLSAGVYAGAVMHV----PIESARDATARAR-----EAGADCAVAVGG-GST 101 (358)
T ss_dssp SCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTC----BHHHHHHHHHHHH-----HHTCSEEEEEES-HHH
T ss_pred CeEEEEeCCcH-----HHHHHHHHHHhccCCEEEecCCcCCC----CHHHHHHHHHHhh-----ccCCCEEEEeCC-cHH
Confidence 57788876542 23567788888765332222232222 1223333433321 246789999999 888
Q ss_pred HHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 161 GWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 161 ~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
..+...+.-. ..+|+..||.
T Consensus 102 iD~aK~iA~~------~~~p~i~IPT 121 (358)
T 3jzd_A 102 TGLGKAIALE------TGMPIVAIPT 121 (358)
T ss_dssp HHHHHHHHHH------HCCCEEEEEC
T ss_pred HHHHHHHHhc------cCCCEEEEeC
Confidence 8888877653 4678888886
No 14
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=69.79 E-value=36 Score=31.27 Aligned_cols=89 Identities=16% Similarity=0.193 Sum_probs=57.2
Q ss_pred CCe-EEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCc
Q 010507 80 EAP-MVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (508)
Q Consensus 80 ~~~-~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGD 157 (508)
|.| +.||. |+..-..+.++....|...++ ||+.....|. .+....++++++.. ..-...|.++|+.
T Consensus 4 m~p~V~Iim----gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR----tp~~l~~~~~~~~~----~g~~ViIa~AG~a 71 (166)
T 3oow_A 4 MSVQVGVIM----GSKSDWSTMKECCDILDNLGIGYECEVVSAHR----TPDKMFDYAETAKE----RGLKVIIAGAGGA 71 (166)
T ss_dssp -CEEEEEEE----SSGGGHHHHHHHHHHHHHTTCEEEEEECCTTT----CHHHHHHHHHHTTT----TTCCEEEEEECSS
T ss_pred CCCeEEEEE----CcHHhHHHHHHHHHHHHHcCCCEEEEEEcCcC----CHHHHHHHHHHHHh----CCCcEEEEECCcc
Confidence 444 44554 443334566777777777776 9998877665 46666777766531 1235678889999
Q ss_pred hhHHHHHHHHhhcccCCCCCCCcEEEeeCCCC
Q 010507 158 GTVGWVLGSVGELNKQGREPVPPVAIIPLGTG 189 (508)
Q Consensus 158 GTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTg 189 (508)
+-+--|+.++. ..|+--+|.-++
T Consensus 72 a~LpgvvA~~t---------~~PVIgVP~~~~ 94 (166)
T 3oow_A 72 AHLPGMVAAKT---------TLPVLGVPVKSS 94 (166)
T ss_dssp CCHHHHHHHTC---------SSCEEEEECCCT
T ss_pred hhhHHHHHhcc---------CCCEEEeecCcC
Confidence 99999998874 445555566444
No 15
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=69.73 E-value=11 Score=38.13 Aligned_cols=86 Identities=16% Similarity=0.132 Sum_probs=51.7
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
++++|+..+.. ..+.+++.+.|.+..+.-.....|.. .....+++++.+. ..+.|.||++|| |++
T Consensus 35 ~r~liVtd~~~-----~~~~~~v~~~L~~~~~~v~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gs~ 99 (353)
T 3hl0_A 35 SRALVLSTPQQ-----KGDAEALASRLGRLAAGVFSEAAMHT----PVEVTKTAVEAYR-----AAGADCVVSLGG-GST 99 (353)
T ss_dssp CCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTC----BHHHHHHHHHHHH-----HTTCSEEEEEES-HHH
T ss_pred CEEEEEecCch-----hhHHHHHHHHHhhCCcEEecCcCCCC----cHHHHHHHHHHHh-----ccCCCEEEEeCC-cHH
Confidence 56788876542 23567788888764321122222222 1233344433321 246789999999 888
Q ss_pred HHHHHHHhhcccCCCCCCCcEEEeeCC
Q 010507 161 GWVLGSVGELNKQGREPVPPVAIIPLG 187 (508)
Q Consensus 161 ~~vl~~l~~~~~~~~~~~~pl~iiPlG 187 (508)
..+...+.-. ..+|+..||.=
T Consensus 100 iD~aK~iA~~------~~~p~i~IPTT 120 (353)
T 3hl0_A 100 TGLGKAIALR------TDAAQIVIPTT 120 (353)
T ss_dssp HHHHHHHHHH------HCCEEEEEECS
T ss_pred HHHHHHHHhc------cCCCEEEEeCC
Confidence 8888877653 46788888863
No 16
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=68.38 E-value=28 Score=32.21 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=52.9
Q ss_pred CCCe-EEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcC
Q 010507 79 PEAP-MVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (508)
Q Consensus 79 ~~~~-~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GG 156 (508)
.|+| +.||. |+..-..+.++....|...++ ||+.....|. .+....++++++.. ..-...|.++|+
T Consensus 10 ~m~~~V~Iim----GS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR----~p~~~~~~~~~a~~----~g~~ViIa~AG~ 77 (174)
T 3kuu_A 10 AAGVKIAIVM----GSKSDWATMQFAADVLTTLNVPFHVEVVSAHR----TPDRLFSFAEQAEA----NGLHVIIAGNGG 77 (174)
T ss_dssp CCCCCEEEEE----SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHTTT----TTCSEEEEEEES
T ss_pred cCCCcEEEEE----CcHHHHHHHHHHHHHHHHcCCCEEEEEEcccC----CHHHHHHHHHHHHh----CCCcEEEEECCh
Confidence 3444 55555 433334556677777777766 9998887765 56777788776531 123468888999
Q ss_pred chhHHHHHHHHh
Q 010507 157 DGTVGWVLGSVG 168 (508)
Q Consensus 157 DGTv~~vl~~l~ 168 (508)
.+-+--|+.++.
T Consensus 78 aa~LpgvvA~~t 89 (174)
T 3kuu_A 78 AAHLPGMLAAKT 89 (174)
T ss_dssp SCCHHHHHHHTC
T ss_pred hhhhHHHHHhcc
Confidence 999999998874
No 17
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=67.84 E-value=34 Score=31.60 Aligned_cols=75 Identities=17% Similarity=0.132 Sum_probs=51.8
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 82 ~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
.+.||.=+.|. ..+.++....|...++ |++.....|. .+....++++++.. ..-...|.++||.|-+
T Consensus 14 ~V~IimGS~SD----~~v~~~a~~~l~~~gi~~ev~V~saHR----~p~~l~~~~~~a~~----~g~~ViIa~AG~aahL 81 (173)
T 4grd_A 14 LVGVLMGSSSD----WDVMKHAVAILQEFGVPYEAKVVSAHR----MPDEMFDYAEKARE----RGLRAIIAGAGGAAHL 81 (173)
T ss_dssp SEEEEESSGGG----HHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHHTT----TTCSEEEEEEESSCCH
T ss_pred eEEEEeCcHhH----HHHHHHHHHHHHHcCCCEEEEEEcccc----CHHHHHHHHHHHHh----cCCeEEEEeccccccc
Confidence 46666644443 4456666777777776 9998887775 46667777766531 1234578889999999
Q ss_pred HHHHHHHh
Q 010507 161 GWVLGSVG 168 (508)
Q Consensus 161 ~~vl~~l~ 168 (508)
--|+.++.
T Consensus 82 pgvvA~~t 89 (173)
T 4grd_A 82 PGMLAAKT 89 (173)
T ss_dssp HHHHHHHC
T ss_pred hhhheecC
Confidence 99998884
No 18
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=67.73 E-value=34 Score=31.86 Aligned_cols=89 Identities=19% Similarity=0.262 Sum_probs=58.6
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
.|.+.|+= |+..-..+.++....|...++ ||+.....|. .+....++++++.. ..-...|.++||.+-
T Consensus 13 ~~~V~Iim---GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR----~p~~l~~~~~~a~~----~g~~ViIa~AG~aa~ 81 (183)
T 1o4v_A 13 VPRVGIIM---GSDSDLPVMKQAAEILEEFGIDYEITIVSAHR----TPDRMFEYAKNAEE----RGIEVIIAGAGGAAH 81 (183)
T ss_dssp -CEEEEEE---SCGGGHHHHHHHHHHHHHTTCEEEEEECCTTT----CHHHHHHHHHHTTT----TTCCEEEEEEESSCC
T ss_pred CCeEEEEe---ccHHHHHHHHHHHHHHHHcCCCeEEEEEcccC----CHHHHHHHHHHHHh----CCCcEEEEecCcccc
Confidence 35554442 444444566777777777776 9998877765 46677778776531 123467888999999
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeCCCC
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTG 189 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPlGTg 189 (508)
+--|+.++. ..|+--+|.-++
T Consensus 82 LpgvvA~~t---------~~PVIgVP~~~~ 102 (183)
T 1o4v_A 82 LPGMVASIT---------HLPVIGVPVKTS 102 (183)
T ss_dssp HHHHHHHHC---------SSCEEEEEECCT
T ss_pred cHHHHHhcc---------CCCEEEeeCCCC
Confidence 999998884 345555565554
No 19
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=66.70 E-value=17 Score=33.15 Aligned_cols=75 Identities=19% Similarity=0.329 Sum_probs=51.7
Q ss_pred CCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhHHHHHHHHhhc
Q 010507 92 GGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGEL 170 (508)
Q Consensus 92 g~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv~~vl~~l~~~ 170 (508)
|+..-..+.++....|...++ ||+.....|. .+....++++++. ..-.|.++|+.|-+--|+.++.
T Consensus 7 gs~SD~~v~~~a~~~l~~~gi~~dv~V~saHR----~p~~~~~~~~~a~-------~~ViIa~AG~aa~Lpgvva~~t-- 73 (157)
T 2ywx_A 7 GSESDLKIAEKAVNILKEFGVEFEVRVASAHR----TPELVEEIVKNSK-------ADVFIAIAGLAAHLPGVVASLT-- 73 (157)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHCC-------CSEEEEEEESSCCHHHHHHTTC--
T ss_pred ccHHHHHHHHHHHHHHHHcCCCeEEEEEcccC----CHHHHHHHHHhcC-------CCEEEEEcCchhhhHHHHHhcc--
Confidence 333334556667777777766 9998877765 4666777776542 3678899999999999987774
Q ss_pred ccCCCCCCCcEEEeeC
Q 010507 171 NKQGREPVPPVAIIPL 186 (508)
Q Consensus 171 ~~~~~~~~~pl~iiPl 186 (508)
..|+--+|.
T Consensus 74 -------~~PVIgVP~ 82 (157)
T 2ywx_A 74 -------TKPVIAVPV 82 (157)
T ss_dssp -------SSCEEEEEE
T ss_pred -------CCCEEEecC
Confidence 345555565
No 20
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=66.15 E-value=21 Score=33.04 Aligned_cols=87 Identities=16% Similarity=0.156 Sum_probs=58.1
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 82 ~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
.+.||.=..| -..+.++....|...++ |++.....|. .+....++++++.. ..-...|.++|+.+-+
T Consensus 9 ~V~IimgS~S----D~~v~~~a~~~L~~~gi~~ev~V~SaHR----~p~~~~~~~~~a~~----~g~~ViIa~AG~aa~L 76 (174)
T 3lp6_A 9 RVGVIMGSDS----DWPVMADAAAALAEFDIPAEVRVVSAHR----TPEAMFSYARGAAA----RGLEVIIAGAGGAAHL 76 (174)
T ss_dssp SEEEEESCGG----GHHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHHHH----HTCCEEEEEEESSCCH
T ss_pred eEEEEECcHH----hHHHHHHHHHHHHHcCCCEEEEEECCCC----CHHHHHHHHHHHHh----CCCCEEEEecCchhhh
Confidence 4666654333 34556667777777766 9998887765 56777777766531 1234788899999999
Q ss_pred HHHHHHHhhcccCCCCCCCcEEEeeCCCC
Q 010507 161 GWVLGSVGELNKQGREPVPPVAIIPLGTG 189 (508)
Q Consensus 161 ~~vl~~l~~~~~~~~~~~~pl~iiPlGTg 189 (508)
--|+.++. ..|+--+|.-++
T Consensus 77 pgvvA~~t---------~~PVIgVP~~~~ 96 (174)
T 3lp6_A 77 PGMVAAAT---------PLPVIGVPVPLG 96 (174)
T ss_dssp HHHHHHHC---------SSCEEEEEECCS
T ss_pred HHHHHhcc---------CCCEEEeeCCCC
Confidence 99998884 345544555544
No 21
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=64.32 E-value=29 Score=32.34 Aligned_cols=76 Identities=16% Similarity=0.117 Sum_probs=52.7
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
..+.||.=..|. ..+.++....|...++ ||+.....|. .+....++++++.. ..-...|.++||.+-
T Consensus 22 ~~V~IimGS~SD----~~v~~~a~~~L~~~Gi~~dv~V~SaHR----~p~~l~~~~~~a~~----~g~~ViIa~AG~aa~ 89 (182)
T 1u11_A 22 PVVGIIMGSQSD----WETMRHADALLTELEIPHETLIVSAHR----TPDRLADYARTAAE----RGLNVIIAGAGGAAH 89 (182)
T ss_dssp CSEEEEESSGGG----HHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHTTT----TTCCEEEEEEESSCC
T ss_pred CEEEEEECcHHH----HHHHHHHHHHHHHcCCCeEEEEEcccC----CHHHHHHHHHHHHh----CCCcEEEEecCchhh
Confidence 457777644443 3456666677777766 9998887765 46677777776431 123467888999999
Q ss_pred HHHHHHHHh
Q 010507 160 VGWVLGSVG 168 (508)
Q Consensus 160 v~~vl~~l~ 168 (508)
+--|+.++.
T Consensus 90 LpgvvA~~t 98 (182)
T 1u11_A 90 LPGMCAAWT 98 (182)
T ss_dssp HHHHHHHHC
T ss_pred hHHHHHhcc
Confidence 999998884
No 22
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=63.71 E-value=34 Score=31.85 Aligned_cols=78 Identities=18% Similarity=0.189 Sum_probs=51.1
Q ss_pred CCCCeEE-EEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEc
Q 010507 78 PPEAPMV-VFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAG 155 (508)
Q Consensus 78 ~~~~~~l-viiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~G 155 (508)
..|+|++ ||.=+.| -..+.++..+.|.+.++ |++.....|. .+....++++++.. ..-...|.++|
T Consensus 19 ~~mkp~V~IimGS~S----D~~v~~~a~~~L~~~gI~~e~~V~SAHR----tp~~l~~~~~~a~~----~g~~ViIa~AG 86 (181)
T 4b4k_A 19 SHMKSLVGVIMGSTS----DWETMKYACDILDELNIPYEKKVVSAHR----TPDYMFEYAETARE----RGLKVIIAGAG 86 (181)
T ss_dssp ---CCSEEEEESSGG----GHHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHTTT----TTCCEEEEEEC
T ss_pred CCCCccEEEEECCHh----HHHHHHHHHHHHHHcCCCeeEEEEcccc----ChHHHHHHHHHHHh----cCceEEEEecc
Confidence 3566644 5554443 34567777778888877 9998877765 46666777766531 22346778899
Q ss_pred CchhHHHHHHHH
Q 010507 156 GDGTVGWVLGSV 167 (508)
Q Consensus 156 GDGTv~~vl~~l 167 (508)
|.+-+--++.++
T Consensus 87 ~aahLpGvvAa~ 98 (181)
T 4b4k_A 87 GAAHLPGMVAAK 98 (181)
T ss_dssp SSCCHHHHHHTT
T ss_pred ccccchhhHHhc
Confidence 999998888765
No 23
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=63.14 E-value=38 Score=30.85 Aligned_cols=69 Identities=12% Similarity=0.150 Sum_probs=48.1
Q ss_pred CCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhccc-CCccEEEEEcCchhHHHHHHHHh
Q 010507 92 GGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDT-RQKMRIVVAGGDGTVGWVLGSVG 168 (508)
Q Consensus 92 g~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~-~~~~~ivv~GGDGTv~~vl~~l~ 168 (508)
|+..-..+.++....|...++ |++.....|. -+....++++++.. . .-...|.++|+.+-+--++.++.
T Consensus 10 gs~SD~~v~~~a~~~l~~~gi~~ev~V~saHR----~p~~~~~~~~~a~~----~~~~~ViIa~AG~aa~LpgvvA~~t 80 (159)
T 3rg8_A 10 GSSSDMGHAEKIASELKTFGIEYAIRIGSAHK----TAEHVVSMLKEYEA----LDRPKLYITIAGRSNALSGFVDGFV 80 (159)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCEEEEEECCTTT----CHHHHHHHHHHHHT----SCSCEEEEEECCSSCCHHHHHHHHS
T ss_pred CcHHHHHHHHHHHHHHHHcCCCEEEEEEcccC----CHHHHHHHHHHhhh----cCCCcEEEEECCchhhhHHHHHhcc
Confidence 443334566777777777776 9998877765 46677777766431 1 13567888899999999999884
No 24
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=62.56 E-value=13 Score=38.26 Aligned_cols=88 Identities=16% Similarity=0.143 Sum_probs=49.7
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
++++|+..+..-. ...+++.+.|.+ .+ +......+.. .....+++++.+. ..+.+.||++|| |+
T Consensus 53 ~r~liVtd~~~~~----~~~~~v~~~L~~-g~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG-Gs 117 (387)
T 3uhj_A 53 KRALVLIDRVLFD----ALSERIGKSCGD-SLDIRFERFGGEC----CTSEIERVRKVAI-----EHGSDILVGVGG-GK 117 (387)
T ss_dssp SEEEEEECTTTHH----HHHHHC-------CCEEEEEECCSSC----SHHHHHHHHHHHH-----HHTCSEEEEESS-HH
T ss_pred CEEEEEECchHHH----HHHHHHHHHHHc-CCCeEEEEcCCCC----CHHHHHHHHHHHh-----hcCCCEEEEeCC-cH
Confidence 6888888765532 356777777776 43 3222222222 1233344443321 236789999999 88
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeCCCC
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTG 189 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPlGTg 189 (508)
+..+...+.-. ..+|+..||.=.|
T Consensus 118 ~~D~AK~iA~~------~~~p~i~IPTTag 141 (387)
T 3uhj_A 118 TADTAKIVAID------TGARIVIAPTIAS 141 (387)
T ss_dssp HHHHHHHHHHH------TTCEEEECCSSCC
T ss_pred HHHHHHHHHHh------cCCCEEEecCccc
Confidence 88888887653 4789999998433
No 25
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=62.55 E-value=41 Score=30.97 Aligned_cols=75 Identities=12% Similarity=0.082 Sum_probs=50.7
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 82 ~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
.+.||. |+..-..+.++....|...++ |++.....|. .+....++++++.. ..-...|.++|+.+-+
T Consensus 8 ~V~Iim----gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR----~p~~~~~~~~~a~~----~g~~ViIa~AG~aa~L 75 (169)
T 3trh_A 8 FVAILM----GSDSDLSTMETAFTELKSLGIPFEAHILSAHR----TPKETVEFVENADN----RGCAVFIAAAGLAAHL 75 (169)
T ss_dssp EEEEEE----SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHHHH----TTEEEEEEEECSSCCH
T ss_pred cEEEEE----CcHHhHHHHHHHHHHHHHcCCCEEEEEEcccC----CHHHHHHHHHHHHh----CCCcEEEEECChhhhh
Confidence 355554 433334566677777777766 9998877765 56677777766431 1224678889999999
Q ss_pred HHHHHHHh
Q 010507 161 GWVLGSVG 168 (508)
Q Consensus 161 ~~vl~~l~ 168 (508)
--|+.++.
T Consensus 76 pgvvA~~t 83 (169)
T 3trh_A 76 AGTIAAHT 83 (169)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcC
Confidence 99998874
No 26
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=61.48 E-value=50 Score=33.37 Aligned_cols=95 Identities=21% Similarity=0.228 Sum_probs=52.8
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-E-EEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~-~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+..+.+-...| +.+++.+.|.+..+ + .+....|.. .....+++++.+. ..+.+.||++|| |
T Consensus 41 ~~~liVtd~~~~~~~g--~~~~v~~~L~~~g~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG-G 108 (371)
T 1o2d_A 41 KRALVVTGKSSSKKNG--SLDDLKKLLDETEISYEIFDEVEENP----SFDNVMKAVERYR-----NDSFDFVVGLGG-G 108 (371)
T ss_dssp SEEEEEEESSGGGTSS--HHHHHHHHHHHTTCEEEEEEEECSSC----BHHHHHHHHHHHT-----TSCCSEEEEEES-H
T ss_pred CEEEEEECchHHhhcc--HHHHHHHHHHHcCCeEEEeCCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-h
Confidence 6889998875533222 56667777765432 2 222222222 2333444444332 246789999988 7
Q ss_pred hHHHHHHHHhhcccC------------CCCCCCcEEEeeCC
Q 010507 159 TVGWVLGSVGELNKQ------------GREPVPPVAIIPLG 187 (508)
Q Consensus 159 Tv~~vl~~l~~~~~~------------~~~~~~pl~iiPlG 187 (508)
++..+...+.-.... .....+|+..||.=
T Consensus 109 sv~D~AK~iA~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTT 149 (371)
T 1o2d_A 109 SPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTT 149 (371)
T ss_dssp HHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECS
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHhcccCCCCCCeEEEEeCC
Confidence 777777666543110 00146799999964
No 27
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=55.54 E-value=11 Score=38.78 Aligned_cols=102 Identities=16% Similarity=0.148 Sum_probs=56.6
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccc------Ce-EEEeeccccceeecchhHHHHHHHccchhhcc--cCCccE
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKE------QV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKD--TRQKMR 150 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~------~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~--~~~~~~ 150 (508)
.++++|+.++.... ...+++.+.|... .. +......+.+ ........+++.+.+.+. . ....+.
T Consensus 36 ~~k~liVtd~~v~~----~~~~~v~~~L~~~~~~~~~g~~~~~~~~~~gE-~~k~~~~v~~~~~~~~~~--~~~~~r~d~ 108 (393)
T 1sg6_A 36 STTYVLVTDTNIGS----IYTPSFEEAFRKRAAEITPSPRLLIYNRPPGE-VSKSRQTKADIEDWMLSQ--NPPCGRDTV 108 (393)
T ss_dssp CSEEEEEEEHHHHH----HHHHHHHHHHHHHHHHSSSCCEEEEEEECSSG-GGSSHHHHHHHHHHHHTS--SSCCCTTCE
T ss_pred CCeEEEEECCcHHH----HHHHHHHHHHHhhhccccCCceeEEEEeCCCC-CCCCHHHHHHHHHHHHHc--CCCCCCCCE
Confidence 35788998864332 2455666666543 21 2111222211 011223344444433210 1 133488
Q ss_pred EEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeC--CCCcchh
Q 010507 151 IVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLS 193 (508)
Q Consensus 151 ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPl--GTgNd~a 193 (508)
||++|| |++..+...+.-.. ...+|+..||. ||+.|-+
T Consensus 109 iIalGG-Gsv~D~ak~~Aa~~----~rgip~i~IPTTlla~~das 148 (393)
T 1sg6_A 109 VIALGG-GVIGDLTGFVASTY----MRGVRYVQVPTTLLAMVDSS 148 (393)
T ss_dssp EEEEES-HHHHHHHHHHHHHG----GGCCEEEEEECSHHHHHTTT
T ss_pred EEEECC-cHHHHHHHHHHHHh----cCCCCEEEECCchhhhhhcC
Confidence 998888 78888887776432 15789999999 8998884
No 28
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=51.83 E-value=23 Score=36.01 Aligned_cols=92 Identities=18% Similarity=0.196 Sum_probs=54.1
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccc-Ce--EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcC
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKE-QV--FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~-~v--~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GG 156 (508)
.++++|+.++.... ...+++.+.|... .+ +.+....+. ......+++.+.+.+. .....+.||+.||
T Consensus 34 ~~k~liVtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~ge~~----k~~~~v~~~~~~~~~~--~~~r~d~iIalGG 103 (368)
T 2gru_A 34 FDQYIMISDSGVPD----SIVHYAAEYFGKLAPVHILRFQGGEEY----KTLSTVTNLQERAIAL--GANRRTAIVAVGG 103 (368)
T ss_dssp CSEEEEEEETTSCH----HHHHHHHHHHTTTSCEEEEEECCSGGG----CSHHHHHHHHHHHHHT--TCCTTEEEEEEES
T ss_pred CCEEEEEECCcHHH----HHHHHHHHHHHhccceeEEEeCCCCCC----CCHHHHHHHHHHHHhc--CCCCCcEEEEECC
Confidence 46899999876643 2567777777653 22 122222221 1233344443332210 1234689999988
Q ss_pred chhHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 157 DGTv~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
|++..+...+.... ...+|+..||.
T Consensus 104 -Gsv~D~ak~~Aa~~----~rgip~i~IPT 128 (368)
T 2gru_A 104 -GLTGNVAGVAAGMM----FRGIALIHVPT 128 (368)
T ss_dssp -HHHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred -hHHHHHHHHHHHHh----cCCCCEEEECC
Confidence 88888888776432 25789999998
No 29
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=50.35 E-value=27 Score=35.61 Aligned_cols=83 Identities=18% Similarity=0.255 Sum_probs=49.1
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
++++|+..+.. ..+.+++.+.|....+|+ ...|.. .....++.++.+. ..+.|.||++|| |++
T Consensus 38 ~rvliVtd~~~-----~~~~~~v~~~L~~~~~f~--~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gs~ 100 (364)
T 3iv7_A 38 AKVMVIAGERE-----MSIAHKVASEIEVAIWHD--EVVMHV----PIEVAERARAVAT-----DNEIDLLVCVGG-GST 100 (364)
T ss_dssp SSEEEECCGGG-----HHHHHHHTTTSCCSEEEC--CCCTTC----BHHHHHHHHHHHH-----HTTCCEEEEEES-HHH
T ss_pred CEEEEEECCCH-----HHHHHHHHHHcCCCEEEc--ceecCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-cHH
Confidence 46777766542 234566766676322232 232322 1233344433321 246789999999 888
Q ss_pred HHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 161 GWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 161 ~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
..+...+.-. ..+|+..||.
T Consensus 101 iD~aK~iA~~------~~~P~i~IPT 120 (364)
T 3iv7_A 101 IGLAKAIAMT------TALPIVAIPT 120 (364)
T ss_dssp HHHHHHHHHH------HCCCEEEEEC
T ss_pred HHHHHHHHhc------cCCCEEEEcC
Confidence 8888877653 4678988987
No 30
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=49.39 E-value=34 Score=35.11 Aligned_cols=101 Identities=13% Similarity=0.205 Sum_probs=53.3
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCeEEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchhH
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGTv 160 (508)
++++|+..+.+-.. ..+.+++.+.|....+..+....|.. .....+++++.+. ..+.+.||++|| |++
T Consensus 51 ~r~liVtd~~~~~~--~g~~~~v~~~L~g~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gsv 118 (408)
T 1oj7_A 51 ARVLITYGGGSVKK--TGVLDQVLDALKGMDVLEFGGIEPNP----AYETLMNAVKLVR-----EQKVTFLLAVGG-GSV 118 (408)
T ss_dssp CEEEEEECSSHHHH--HSHHHHHHHHTTTSEEEEECCCCSSC----BHHHHHHHHHHHH-----HHTCCEEEEEES-HHH
T ss_pred CEEEEEECCchhhh--ccHHHHHHHHhCCCEEEEeCCcCCCc----CHHHHHHHHHHHH-----HcCCCEEEEeCC-chH
Confidence 68888886543211 11567777777521122222222222 2233333433321 235689999998 777
Q ss_pred HHHHHHHhhcccC---------------CCCCCCcEEEeeC--CCCcchh
Q 010507 161 GWVLGSVGELNKQ---------------GREPVPPVAIIPL--GTGNDLS 193 (508)
Q Consensus 161 ~~vl~~l~~~~~~---------------~~~~~~pl~iiPl--GTgNd~a 193 (508)
..+...+.-.... .....+|+..||. |||-...
T Consensus 119 iD~AK~iA~~~~~~~~~~~~d~~~~~~~~~~~~~p~i~IPTTagtgSevt 168 (408)
T 1oj7_A 119 LDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESN 168 (408)
T ss_dssp HHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGS
T ss_pred HHHHHHHHHHHhCCCCCCHHHHhccccCcCCCCCCEEEEeCCCchhHHhC
Confidence 7777666543110 0115679999997 6654444
No 31
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=48.51 E-value=40 Score=34.80 Aligned_cols=96 Identities=16% Similarity=0.196 Sum_probs=54.6
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCc
Q 010507 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (508)
Q Consensus 79 ~~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGD 157 (508)
..++++|+.++... +...+++.+.|....+ +........+ ........+++.+.+.+. ..+..+.||++||
T Consensus 61 ~~~rvlIVtd~~v~----~~~~~~v~~~L~~~g~~~~~~~~~~gE-~~kt~~~v~~~~~~l~~~--~~~R~d~IIAvGG- 132 (390)
T 3okf_A 61 AKQKVVIVTNHTVA----PLYAPAIISLLDHIGCQHALLELPDGE-QYKTLETFNTVMSFLLEH--NYSRDVVVIALGG- 132 (390)
T ss_dssp TTCEEEEEEETTTH----HHHHHHHHHHHHHHTCEEEEEEECSSG-GGCBHHHHHHHHHHHHHT--TCCTTCEEEEEES-
T ss_pred CCCEEEEEECCcHH----HHHHHHHHHHHHHcCCeEEEEEECCCc-CCchHHHHHHHHHHHHhc--CCCcCcEEEEECC-
Confidence 34688999987654 2366777777776542 2221111111 001233444444433211 1234578999988
Q ss_pred hhHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 158 GTv~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
|++..+...+.... ...+|+..||.
T Consensus 133 Gsv~D~ak~~Aa~~----~rgip~I~IPT 157 (390)
T 3okf_A 133 GVIGDLVGFAAACY----QRGVDFIQIPT 157 (390)
T ss_dssp HHHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred cHHhhHHHHHHHHh----cCCCCEEEeCC
Confidence 88888887775332 25789999998
No 32
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=46.32 E-value=7 Score=34.78 Aligned_cols=33 Identities=6% Similarity=-0.176 Sum_probs=26.7
Q ss_pred heehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
.|+..+..|..| |||..|..|+..++.+||...
T Consensus 79 fI~~~~~~~~~VlVHC~~G~sRS~~vv~ayLm~~ 112 (161)
T 3emu_A 79 FIIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYY 112 (161)
T ss_dssp HHHHHHHTTCEEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEcCCCCcHHHHHHHHHHHHH
Confidence 445555666677 999999999999999999864
No 33
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=45.70 E-value=8.7 Score=32.99 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=27.0
Q ss_pred heehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
.|+..+..|..+ |||..|..|+-.++.+||...
T Consensus 73 ~i~~~~~~~~~VlVHC~~G~~RS~~~~~aylm~~ 106 (144)
T 3ezz_A 73 YIDAVKDCRGRVLVHSQAGISRSATICLAYLMMK 106 (144)
T ss_dssp HHHHHHHTTCCEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 445566667777 999999999999999999874
No 34
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=44.69 E-value=64 Score=32.98 Aligned_cols=93 Identities=16% Similarity=0.107 Sum_probs=52.5
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
++++|+.++.... +.+++.+.|....+ +........+ -.......+++.+.+.+. .....+.||++|| |+
T Consensus 44 ~rvlIVtd~~v~~-----~~~~v~~~L~~~g~~~~~~~~~~gE-~~kt~~~v~~~~~~l~~~--~~~r~d~IIavGG-Gs 114 (368)
T 3qbe_A 44 HKVAVVHQPGLAE-----TAEEIRKRLAGKGVDAHRIEIPDAE-AGKDLPVVGFIWEVLGRI--GIGRKDALVSLGG-GA 114 (368)
T ss_dssp SEEEEEECGGGHH-----HHHHHHHHHHHTTCEEEEEECCSGG-GGGBHHHHHHHHHHHHHH--TCCTTCEEEEEES-HH
T ss_pred CEEEEEECccHHH-----HHHHHHHHHHhcCCcceEEEeCCCC-CCCCHHHHHHHHHHHHHc--CCCCCcEEEEECC-hH
Confidence 6889999876532 35677777766543 2221111111 001223344443332211 1235689999998 88
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
+..+...+.... ...+|+..||.
T Consensus 115 v~D~ak~~Aa~~----~rgip~i~IPT 137 (368)
T 3qbe_A 115 ATDVAGFAAATW----LRGVSIVHLPT 137 (368)
T ss_dssp HHHHHHHHHHHG----GGCCEEEEEEC
T ss_pred HHHHHHHHHHHh----ccCCcEEEECC
Confidence 888887776432 14689999996
No 35
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=44.07 E-value=7.5 Score=33.57 Aligned_cols=48 Identities=8% Similarity=0.040 Sum_probs=33.9
Q ss_pred heehhhhcCcce-EEeeccccccccchhhhhhHhh----hhh---hhccCCCCCCC
Q 010507 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVAM----SNA---IRRKEGEPPAD 63 (508)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~~----~~~---~~~~~~~~~~~ 63 (508)
.|+..+..|..+ |||..|..|+-.++.+||.... .++ ++++++....|
T Consensus 73 fi~~~~~~~~~VlVHC~~G~sRS~~~v~ayLm~~~~~~~~~A~~~v~~~Rp~~~pn 128 (144)
T 3s4e_A 73 FIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPN 128 (144)
T ss_dssp HHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHHHCCCHHHHHHHHHHHSTTCCCC
T ss_pred HHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHCCCcCCC
Confidence 455666677777 9999999999999999998732 122 45666544444
No 36
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=43.35 E-value=64 Score=32.18 Aligned_cols=89 Identities=11% Similarity=0.132 Sum_probs=52.4
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
++++|+..+..-. ...+++.+.|.+..+ +.+....|.. .....+++ +.+ + ..+.+.||++|| |+
T Consensus 35 ~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~~~~~----~~~~v~~~-~~~----~-~~~~d~IIavGG-Gs 99 (354)
T 3ce9_A 35 KRVSLYFGEGIYE----LFGETIEKSIKSSNIEIEAVETVKNI----DFDEIGTN-AFK----I-PAEVDALIGIGG-GK 99 (354)
T ss_dssp SEEEEEEETTHHH----HHHHHHHHHHHTTTCEEEEEEEECCC----BHHHHHHH-HTT----S-CTTCCEEEEEES-HH
T ss_pred CeEEEEECccHHH----HHHHHHHHHHHHcCCeEEEEecCCCC----CHHHHHHH-HHh----h-hcCCCEEEEECC-hH
Confidence 4888988765432 255777777765432 2111101221 12333344 332 2 256789999988 78
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeCCCCc
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGN 190 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPlGTgN 190 (508)
+..+...+.-. ..+|+..||.=.+.
T Consensus 100 v~D~aK~vA~~------~~~p~i~IPTT~~t 124 (354)
T 3ce9_A 100 AIDAVKYMAFL------RKLPFISVPTSTSN 124 (354)
T ss_dssp HHHHHHHHHHH------HTCCEEEEESCCSS
T ss_pred HHHHHHHHHhh------cCCCEEEecCcccC
Confidence 88888777643 46899999974443
No 37
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=41.54 E-value=9.4 Score=35.10 Aligned_cols=32 Identities=13% Similarity=-0.070 Sum_probs=26.6
Q ss_pred eehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
|+..+..|..| |||..|..|+..++.+||...
T Consensus 110 I~~~~~~g~~VLVHC~~G~sRS~tvv~ayLm~~ 142 (182)
T 2j16_A 110 IHAATTKREKILIHAQCGLSRSATLIIAYIMKY 142 (182)
T ss_dssp HHHHHHTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEECCCCCChHHHHHHHHHHHH
Confidence 45556667777 999999999999999999864
No 38
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=41.53 E-value=87 Score=31.65 Aligned_cols=102 Identities=14% Similarity=0.180 Sum_probs=53.6
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-E-EEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~-~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+..+..-... +.+.+++.+.|....+ + .+....|.. .....+++++.+. ..+.+.||++|| |
T Consensus 34 ~~~livtd~~~~~~~-~g~~~~v~~~L~~~g~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG-G 102 (387)
T 3bfj_A 34 KKALLVTDKGLRAIK-DGAVDKTLHYLREAGIEVAIFDGVEPNP----KDTNVRDGLAVFR-----REQCDIIVTVGG-G 102 (387)
T ss_dssp SEEEEECCTTTC--C-CSSHHHHHHHHHHTTCEEEEECCCCSSC----BHHHHHHHHHHHH-----HTTCCEEEEEES-H
T ss_pred CEEEEEECcchhhcc-chHHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-c
Confidence 588888877654320 0135666666655432 2 222222322 2333344444322 246689999988 7
Q ss_pred hHHHHHHHHhhc---------cc---CCCCCCCcEEEeeC--CCCcchh
Q 010507 159 TVGWVLGSVGEL---------NK---QGREPVPPVAIIPL--GTGNDLS 193 (508)
Q Consensus 159 Tv~~vl~~l~~~---------~~---~~~~~~~pl~iiPl--GTgNd~a 193 (508)
++..+...+.-. .. ......+|+..||. |||--..
T Consensus 103 sv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSevt 151 (387)
T 3bfj_A 103 SPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEVT 151 (387)
T ss_dssp HHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECSTTCCGGGC
T ss_pred chhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcccccc
Confidence 777776666432 00 00124679999997 5554333
No 39
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=40.39 E-value=49 Score=33.28 Aligned_cols=86 Identities=13% Similarity=0.118 Sum_probs=51.2
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
++++|+..+.+-. ...+++.+.|....+ +.+....+.. .....+++++.+. ..+.+.||++|| |+
T Consensus 32 ~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~~ge~----~~~~v~~~~~~~~-----~~~~d~IIavGG-Gs 97 (370)
T 1jq5_A 32 NKTVVIADEIVWK----IAGHTIVNELKKGNIAAEEVVFSGEA----SRNEVERIANIAR-----KAEAAIVIGVGG-GK 97 (370)
T ss_dssp SEEEEEECHHHHH----HTHHHHHHHHHTTTCEEEEEECCSSC----BHHHHHHHHHHHH-----HTTCSEEEEEES-HH
T ss_pred CeEEEEEChHHHH----HHHHHHHHHHHHcCCeEEEEeeCCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-hH
Confidence 6889988765533 246677777765443 3212211111 1123334433321 246799999998 78
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
+..+...+.-. ..+|+..||.
T Consensus 98 v~D~aK~iA~~------~~~p~i~IPT 118 (370)
T 1jq5_A 98 TLDTAKAVADE------LDAYIVIVPT 118 (370)
T ss_dssp HHHHHHHHHHH------HTCEEEEEES
T ss_pred HHHHHHHHHHh------cCCCEEEecc
Confidence 88888777643 3689999997
No 40
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=37.27 E-value=50 Score=33.06 Aligned_cols=93 Identities=14% Similarity=0.124 Sum_probs=52.9
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe--EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCc
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV--FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v--~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGD 157 (508)
.++++|+.++..... ..+++.+.|....+ +.+....+.. .....+++.+.+.+. ..+..+.||++||
T Consensus 26 ~~~~livtd~~v~~~----~~~~v~~~L~~~~~~~~~~~~~e~~k----~~~~v~~~~~~~~~~--~~~r~d~iIavGG- 94 (343)
T 3clh_A 26 KQKALIISDSIVAGL----HLPYLLERLKALEVRVCVIESGEKYK----NFHSLERILNNAFEM--QLNRHSLMIALGG- 94 (343)
T ss_dssp SSCEEEEEEHHHHTT----THHHHHTTEECSCEEEEEECSSGGGC----SHHHHHHHHHHHHHT--TCCTTCEEEEEES-
T ss_pred CCEEEEEECCcHHHH----HHHHHHHHHHhCCcEEEEeCCCCCCC----CHHHHHHHHHHHHhc--CCCCCceEEEECC-
Confidence 468889988765432 45677777765433 2222222211 223344444333210 1234588999988
Q ss_pred hhHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 010507 158 GTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (508)
Q Consensus 158 GTv~~vl~~l~~~~~~~~~~~~pl~iiPlG 187 (508)
|++..+...+.-.. ...+|+..||.=
T Consensus 95 Gsv~D~ak~~A~~~----~rgip~i~IPTT 120 (343)
T 3clh_A 95 GVISDMVGFASSIY----FRGIDFINIPTT 120 (343)
T ss_dssp HHHHHHHHHHHHHB----TTCCEEEEEECS
T ss_pred hHHHHHHHHHHHHh----ccCCCEEEeCCc
Confidence 78888877776432 257899999943
No 41
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=35.37 E-value=68 Score=33.55 Aligned_cols=85 Identities=15% Similarity=0.135 Sum_probs=50.3
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCchh
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDGT 159 (508)
++++|+..+.+-. .+.+++.+.|....+ +.+....+.. .....+++++.+ + . +.+.||++|| |+
T Consensus 92 ~rvlIVtd~~~~~----~~~~~v~~~L~~~gi~~~~~~~~ge~----~~~~v~~~~~~~----~-~-~~D~IIAvGG-GS 156 (450)
T 1ta9_A 92 KSAVVLADQNVWN----ICANKIVDSLSQNGMTVTKLVFGGEA----SLVELDKLRKQC----P-D-DTQVIIGVGG-GK 156 (450)
T ss_dssp SEEEEEEEHHHHH----HTHHHHHHHHHHTTCEEEEEEECSCC----CHHHHHHHHTTS----C-T-TCCEEEEEES-HH
T ss_pred CEEEEEECccHHH----HHHHHHHHHHHHCCCeEEEEeeCCCC----CHHHHHHHHHHH----h-h-CCCEEEEeCC-cH
Confidence 4888888765433 245667777765443 2211111111 112334444332 2 2 6789999998 78
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 160 v~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
+..+...+.-. ..+|+..||.
T Consensus 157 viD~AK~iA~~------~giP~I~IPT 177 (450)
T 1ta9_A 157 TMDSAKYIAHS------MNLPSIICPT 177 (450)
T ss_dssp HHHHHHHHHHH------TTCCEEEEES
T ss_pred HHHHHHHHHHh------cCCCEEEEeC
Confidence 88888777643 4689999997
No 42
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=35.29 E-value=1e+02 Score=31.41 Aligned_cols=100 Identities=18% Similarity=0.264 Sum_probs=52.9
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-E-EEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~-~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+..+.+-... .+.+++.+.|.+..+ + .+....|.. .....+++++.+. ..+.+.||++|| |
T Consensus 44 ~r~liVtd~~~~~~~--g~~~~v~~~L~~~g~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-G 111 (407)
T 1vlj_A 44 RKVLFLYGGGSIKKN--GVYDQVVDSLKKHGIEWVEVSGVKPNP----VLSKVHEAVEVAK-----KEKVEAVLGVGG-G 111 (407)
T ss_dssp CEEEEEECSSHHHHS--SHHHHHHHHHHHTTCEEEEECCCCSSC----BHHHHHHHHHHHH-----HTTCSEEEEEES-H
T ss_pred CeEEEEECchHHhhc--cHHHHHHHHHHHcCCeEEEecCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-h
Confidence 578888764322111 156777777765442 2 122222222 1233344443321 246689999998 7
Q ss_pred hHHHHHHHHhhcc------------cCCCCCCCcEEEeeC--CCCcch
Q 010507 159 TVGWVLGSVGELN------------KQGREPVPPVAIIPL--GTGNDL 192 (508)
Q Consensus 159 Tv~~vl~~l~~~~------------~~~~~~~~pl~iiPl--GTgNd~ 192 (508)
++..+...+.-.. .......+|+..||. |||--.
T Consensus 112 sviD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSev 159 (407)
T 1vlj_A 112 SVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEM 159 (407)
T ss_dssp HHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGG
T ss_pred hHHHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcchhh
Confidence 7777776665421 000125679999996 554333
No 43
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=33.98 E-value=13 Score=31.99 Aligned_cols=33 Identities=12% Similarity=0.095 Sum_probs=26.4
Q ss_pred heehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
.|+..+..|..+ |||..|..|+-.++.+||...
T Consensus 73 fi~~~~~~~~~VlVHC~~G~~RS~~~v~ayLm~~ 106 (145)
T 2nt2_A 73 FISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKE 106 (145)
T ss_dssp HHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCCCCchHHHHHHHHHHHH
Confidence 345555567777 999999999999999999864
No 44
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=33.55 E-value=90 Score=32.70 Aligned_cols=84 Identities=20% Similarity=0.236 Sum_probs=56.4
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCc--cEEEEEcCc
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK--MRIVVAGGD 157 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~--~~ivv~GGD 157 (508)
..+.||.=+.|. ..+.+.....|...++ |++.....|. -+....++++++. .++. ..|.++||.
T Consensus 266 ~~V~Ii~gs~SD----~~~~~~a~~~l~~~gi~~~v~V~saHR----~p~~~~~~~~~~~-----~~g~~~viIa~AG~~ 332 (425)
T 2h31_A 266 CRVVVLMGSTSD----LGHCEKIKKACGNFGIPCELRVTSAHK----GPDETLRIKAEYE-----GDGIPTVFVAVAGRS 332 (425)
T ss_dssp CEEEEEESCGGG----HHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHHH-----TTCCCEEEEEECCSS
T ss_pred CeEEEEecCccc----HHHHHHHHHHHHHcCCceEEeeeeccC----CHHHHHHHHHHHH-----HCCCCeEEEEEcCcc
Confidence 356666644433 3456666667776666 8998877665 4677777777653 1233 578888999
Q ss_pred hhHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 158 GTv~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
|.+--|+.++. ..|+--+|.
T Consensus 333 a~Lpgvva~~t---------~~PVIgvP~ 352 (425)
T 2h31_A 333 NGLGPVMSGNT---------AYPVISCPP 352 (425)
T ss_dssp CCHHHHHHHHC---------SSCEEECCC
T ss_pred cchHhHHhccC---------CCCEEEeeC
Confidence 99999999884 345555665
No 45
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=33.00 E-value=72 Score=32.01 Aligned_cols=90 Identities=16% Similarity=0.191 Sum_probs=51.6
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
.++++|+.++... . ..+++.+.|. ..+ +.+....+.. .....+++.+.+.+. ..+..+.||++|| |
T Consensus 28 ~~kvliVtd~~v~----~-~~~~v~~~L~-~~~~~~~~~ge~~~----~~~~v~~~~~~~~~~--~~~r~d~IIavGG-G 94 (348)
T 1ujn_A 28 AGPAALLFDRRVE----G-FAQEVAKALG-VRHLLGLPGGEAAK----SLEVYGKVLSWLAEK--GLPRNATLLVVGG-G 94 (348)
T ss_dssp SSCEEEEEEGGGH----H-HHHHHHHHHT-CCCEEEECCSGGGS----SHHHHHHHHHHHHHH--TCCTTCEEEEEES-H
T ss_pred CCEEEEEECCcHH----H-HHHHHHHHhc-cCeEEEECCCCCCC----CHHHHHHHHHHHHHc--CCCCCCEEEEECC-c
Confidence 4688999886433 3 6667777775 222 2222111111 223344443332211 1245688999988 7
Q ss_pred hHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 159 TVGWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 159 Tv~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
++..+...+.... ...+|+..||.
T Consensus 95 sv~D~ak~~A~~~----~rgip~i~IPT 118 (348)
T 1ujn_A 95 TLTDLGGFVAATY----LRGVAYLAFPT 118 (348)
T ss_dssp HHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred HHHHHHHHHHHHh----ccCCCEEEecC
Confidence 8888887776432 25789999997
No 46
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=32.49 E-value=99 Score=31.38 Aligned_cols=98 Identities=11% Similarity=0.190 Sum_probs=53.9
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-E-EEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCc
Q 010507 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (508)
Q Consensus 80 ~~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~-~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGD 157 (508)
.++++|+..+.--. ..+.+++.+.|.+..+ + .+....|.. .....+++++.+. ..+.|.||++||
T Consensus 31 ~~~~liVtd~~~~~---~g~~~~v~~~L~~~gi~~~~~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG- 97 (383)
T 3ox4_A 31 FKNALIVSDAFMNK---SGVVKQVADLLKAQGINSAVYDGVMPNP----TVTAVLEGLKILK-----DNNSDFVISLGG- 97 (383)
T ss_dssp CCEEEEEEEHHHHH---TTHHHHHHHHHHTTTCEEEEEEEECSSC----BHHHHHHHHHHHH-----HHTCSEEEEEES-
T ss_pred CCEEEEEECCchhh---CchHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHHH-----hcCcCEEEEeCC-
Confidence 36788887753211 1156777777876543 2 222223322 2233344443322 246789999999
Q ss_pred hhHHHHHHHHhhccc------------CCCCCCCcEEEeeC--CCCc
Q 010507 158 GTVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGN 190 (508)
Q Consensus 158 GTv~~vl~~l~~~~~------------~~~~~~~pl~iiPl--GTgN 190 (508)
|++..+...+.-... ......+|+..||. |||-
T Consensus 98 Gsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgS 144 (383)
T 3ox4_A 98 GSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTAGTAS 144 (383)
T ss_dssp HHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSSSCCT
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCCCchh
Confidence 888777766643210 00124689999997 4543
No 47
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=32.08 E-value=1.3e+02 Score=30.20 Aligned_cols=40 Identities=30% Similarity=0.281 Sum_probs=32.7
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchh
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~a 193 (508)
.+-+.+|+.|||||..-+ +.|.+ ..+|+--||-==-||+.
T Consensus 93 ~~Id~LvvIGGdgS~~~a-~~L~~-------~~i~vvgiPkTIDNDl~ 132 (320)
T 1pfk_A 93 RGIDALVVIGGDGSYMGA-MRLTE-------MGFPCIGLPGTIDNDIK 132 (320)
T ss_dssp TTCCEEEEEECHHHHHHH-HHHHH-------TTCCEEEEEBCTTCCCT
T ss_pred cCCCEEEEECCCchHHHH-HHHHh-------hCCCEEEEeccccCCCC
Confidence 467899999999998765 45555 36788889999999997
No 48
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=30.97 E-value=11 Score=32.50 Aligned_cols=33 Identities=12% Similarity=0.096 Sum_probs=26.3
Q ss_pred heehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
.|+..+..|..+ |||..|..|+-.++.+||...
T Consensus 81 ~i~~~~~~~~~vlVHC~~G~~Rsg~~~~a~l~~~ 114 (157)
T 3rgo_A 81 FALKYQALGQCVYVHCKAGRSRSATMVAAYLIQV 114 (157)
T ss_dssp HHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEECCCCCChHHHHHHHHHHHH
Confidence 344555566666 999999999999999998874
No 49
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=28.91 E-value=1.2e+02 Score=30.28 Aligned_cols=40 Identities=23% Similarity=0.170 Sum_probs=32.3
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchh
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~a 193 (508)
.+-+.+|+.|||||..-+ +.|.+ ..+|+--||-==-||+.
T Consensus 92 ~~Id~LvvIGGdgS~~~a-~~L~~-------~~i~vvgiPkTIDNDl~ 131 (319)
T 1zxx_A 92 HGIDAVVVIGGDGSYHGA-LQLTR-------HGFNSIGLPGTIDNDIP 131 (319)
T ss_dssp TTCCEEEEEECHHHHHHH-HHHHH-------TTCCEEEEEEETTCCCT
T ss_pred hCCCEEEEECCchHHHHH-HHHHH-------hCCCEEEEeecccCCCC
Confidence 467899999999998765 45555 35788889999999997
No 50
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=27.53 E-value=17 Score=32.04 Aligned_cols=33 Identities=18% Similarity=0.073 Sum_probs=26.1
Q ss_pred heehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
.|+..+..|..+ |||..|..|+-.++.+||...
T Consensus 75 fi~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 108 (165)
T 1wrm_A 75 FIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTV 108 (165)
T ss_dssp HHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 344445566777 999999999999999999864
No 51
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=27.42 E-value=1.2e+02 Score=32.24 Aligned_cols=45 Identities=29% Similarity=0.285 Sum_probs=32.1
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhc-ccCCCCCCCcEEEeeCCCCcchh
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGEL-NKQGREPVPPVAIIPLGTGNDLS 193 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~-~~~~~~~~~pl~iiPlGTgNd~a 193 (508)
.+-+.+|++|||||..-+. .|.+. .. ....+++--||-==-||+.
T Consensus 188 ~~Id~LvvIGGdgS~~~A~-~L~e~~~~--~g~~i~vVGIPkTIDNDl~ 233 (487)
T 2hig_A 188 LGVNILFTVGGDGTQRGAL-VISQEAKR--RGVDISVFGVPKTIDNDLS 233 (487)
T ss_dssp HTCSEEEEEECHHHHHHHH-HHHHHHHH--HTCCCEEEEEECCTTSSCC
T ss_pred cCCCEEEEeCCCchHHHHH-HHHHHHHH--hCCCceEEeccccccCCCC
Confidence 4678999999999987543 23211 00 1246889999999999996
No 52
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=27.34 E-value=18 Score=31.09 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=26.1
Q ss_pred heehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
.|+..+..|..+ |||..|..|+-.++.+||...
T Consensus 75 ~i~~~~~~~~~VlVHC~~G~~RSg~~~~ayl~~~ 108 (149)
T 1zzw_A 75 FIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKH 108 (149)
T ss_dssp HHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 344555556677 999999999999999999863
No 53
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=26.80 E-value=19 Score=31.61 Aligned_cols=32 Identities=16% Similarity=0.072 Sum_probs=25.6
Q ss_pred eehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
|+..+..|..+ |||..|..|+-.++.+||...
T Consensus 82 i~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 114 (164)
T 2hcm_A 82 MEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRH 114 (164)
T ss_dssp HHHHHHTTCEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCCchHHHHHHHHHHHH
Confidence 44455556667 999999999999999999864
No 54
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=25.65 E-value=23 Score=30.96 Aligned_cols=32 Identities=16% Similarity=-0.035 Sum_probs=25.3
Q ss_pred eehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
|+..+..|..+ |||..|..|+-.++.+||...
T Consensus 78 i~~~~~~~~~VlVHC~~G~~RS~~vv~ayLm~~ 110 (155)
T 2hxp_A 78 IDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQK 110 (155)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCCCCchhHHHHHHHHHHH
Confidence 34445556677 999999999999999999754
No 55
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=25.09 E-value=22 Score=32.35 Aligned_cols=32 Identities=16% Similarity=-0.034 Sum_probs=25.5
Q ss_pred eehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
|+..+..|..| |||..|..|+-.++.+||...
T Consensus 90 I~~~~~~~~~VLVHC~aG~sRS~~vv~ayLm~~ 122 (188)
T 2esb_A 90 IHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKY 122 (188)
T ss_dssp HHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCCchHHHHHHHHHHHH
Confidence 34444557777 999999999999999999764
No 56
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=24.73 E-value=25 Score=30.26 Aligned_cols=32 Identities=16% Similarity=0.036 Sum_probs=24.8
Q ss_pred eehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
|+..+..|..+ |||.-|..|+-.++.+||...
T Consensus 83 i~~~~~~~~~vlvHC~aG~~RS~~~~~ayl~~~ 115 (154)
T 2r0b_A 83 IDGSLQMGGKVLVHGNAGISRSAAFVIAYIMET 115 (154)
T ss_dssp HHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEcCCCCChHHHHHHHHHHHH
Confidence 34444556667 999999999999999998753
No 57
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=24.70 E-value=1.6e+02 Score=29.57 Aligned_cols=99 Identities=13% Similarity=0.251 Sum_probs=53.0
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccCe-E-EEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCch
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~v-~-~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGDG 158 (508)
++++|+..+..-.. .+.+++.+.|....+ + .+....|.. .....+++++.+. ..+.+.||++|| |
T Consensus 32 ~~~livtd~~~~~~---g~~~~v~~~L~~~g~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG-G 98 (386)
T 1rrm_A 32 QKALIVTDKTLVQC---GVVAKVTDKMDAAGLAWAIYDGVVPNP----TITVVKEGLGVFQ-----NSGADYLIAIGG-G 98 (386)
T ss_dssp CEEEEECBHHHHHT---THHHHHHHHHHHTTCEEEEECBCCSSC----BHHHHHHHHHHHH-----HHTCSEEEEEES-H
T ss_pred CEEEEEECcchhhc---hHHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHHH-----hcCcCEEEEeCC-h
Confidence 57788876543211 256777777765432 2 222223322 2333444444332 235689999998 7
Q ss_pred hHHHHHHHHhhcccC--------------CCCCCCcEEEeeC--CCCcch
Q 010507 159 TVGWVLGSVGELNKQ--------------GREPVPPVAIIPL--GTGNDL 192 (508)
Q Consensus 159 Tv~~vl~~l~~~~~~--------------~~~~~~pl~iiPl--GTgNd~ 192 (508)
++..+...+.-.... .....+|+..||. |||--.
T Consensus 99 sv~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSev 148 (386)
T 1rrm_A 99 SPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEV 148 (386)
T ss_dssp HHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTTT
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCCCchhhh
Confidence 777776665432100 0024679999997 555433
No 58
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=24.37 E-value=26 Score=32.88 Aligned_cols=33 Identities=21% Similarity=0.163 Sum_probs=26.4
Q ss_pred heehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
.|+..+..|..+ |||..|..|+-.++.+||...
T Consensus 75 fI~~~~~~~~~VLVHC~aG~sRSgtvv~AYLm~~ 108 (211)
T 2g6z_A 75 FIDCVREKGGKVLVHSEAGISRSPTICMAYLMKT 108 (211)
T ss_dssp HHHHHHHTTCCEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEECCCCCCcHHHHHHHHHHHH
Confidence 344555567777 999999999999999999864
No 59
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=21.50 E-value=2.2e+02 Score=29.59 Aligned_cols=46 Identities=20% Similarity=0.180 Sum_probs=32.2
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchh
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~a 193 (508)
.+-+.+|++|||||..-+. .|.+.-. .....+++--||-==-||++
T Consensus 103 ~~Id~Lv~IGGdgS~~~A~-~L~~~~~-~~g~~i~vIGiPkTIDNDl~ 148 (419)
T 3hno_A 103 HDIGYFFYNGGGDSADTCL-KVSQLSG-TLGYPIQAIHVPKTVDNDLP 148 (419)
T ss_dssp TTEEEEEEEESHHHHHHHH-HHHHHHH-HTTCCCEEEEEECCTTCCCS
T ss_pred cCCCEEEEeCCchHHHHHH-HHHHHHH-HhCCCccEEEecccccCCCc
Confidence 4778999999999986553 3432100 01246888889988899996
No 60
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=21.46 E-value=68 Score=32.13 Aligned_cols=90 Identities=12% Similarity=0.147 Sum_probs=46.9
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcccC-e--EEEeeccccceeecchhHHHHHHHccchhhcccCCccEEEEEcCc
Q 010507 81 APMVVFINSRSGGRHGPELKERLQELMGKEQ-V--FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (508)
Q Consensus 81 ~~~lviiNp~sg~~~~~~~~~~l~~~l~~~~-v--~~l~~~~~~~~~T~~~~~a~~la~~~~~~~~~~~~~~~ivv~GGD 157 (508)
++++|+.++... ....+++.+.| ... + +.+....+.. .....+++.+.+.+. ..+..+.||++||
T Consensus 32 ~~~liVtd~~~~----~~~~~~v~~~L-~~g~~~~~~~~~~e~~p----~~~~v~~~~~~~~~~--~~~r~d~iIavGG- 99 (354)
T 1xah_A 32 DQSFLLIDEYVN----QYFANKFDDIL-SYENVHKVIIPAGEKTK----TFEQYQETLEYILSH--HVTRNTAIIAVGG- 99 (354)
T ss_dssp SCEEEEEEHHHH----HHHHHHHC-------CEEEEEECSGGGGC----SHHHHHHHHHHHHTT--CCCTTCEEEEEES-
T ss_pred CeEEEEECCcHH----HHHHHHHHHHH-hcCCeEEEEECCCCCCC----CHHHHHHHHHHHHHc--CCCCCceEEEECC-
Confidence 678888875432 22456666666 432 2 1222222211 223334444332210 1233488999988
Q ss_pred hhHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 010507 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (508)
Q Consensus 158 GTv~~vl~~l~~~~~~~~~~~~pl~iiPl 186 (508)
|++..+...+.-.. ...+|+..||.
T Consensus 100 Gsv~D~ak~vA~~~----~rgip~i~IPT 124 (354)
T 1xah_A 100 GATGDFAGFVAATL----LRGVHFIQVPT 124 (354)
T ss_dssp HHHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred hHHHHHHHHHHHHh----ccCCCEEEECC
Confidence 78888887776432 25789999997
No 61
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=20.56 E-value=22 Score=30.29 Aligned_cols=31 Identities=16% Similarity=0.059 Sum_probs=24.5
Q ss_pred eehhhhcCcce-EEeeccccccccchhhhhhH
Q 010507 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (508)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~ 47 (508)
|+..+..+..+ |||.-|..|+-.++..||..
T Consensus 81 i~~~~~~~~~vlVHC~~G~~Rsg~~~a~~l~~ 112 (150)
T 4erc_A 81 VDEANARGEAVGVHCALGFGRTGTMLACYLVK 112 (150)
T ss_dssp HHHHHHTTCEEEEECSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 34444555566 99999999999999999876
No 62
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=20.43 E-value=29 Score=31.09 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=26.0
Q ss_pred heehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
.|+..+..|..+ |||..|..|+-.++.+||...
T Consensus 79 ~i~~~~~~~~~VlVHC~aG~~RSg~~v~ayLm~~ 112 (177)
T 2oud_A 79 FIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKH 112 (177)
T ss_dssp HHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCcEEEEcCCCCCchHHHHHHHHHHH
Confidence 344555556677 999999999999999999863
No 63
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=20.22 E-value=38 Score=29.49 Aligned_cols=32 Identities=16% Similarity=0.049 Sum_probs=24.7
Q ss_pred eehhhhcCcce-EEeeccccccccchhhhhhHh
Q 010507 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (508)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~lr~~~~~p~yl~~~ 48 (508)
|+..+..|..+ |||..|..|+-.++.+||...
T Consensus 77 i~~~~~~~~~VlVHC~aG~~RSg~~~~aylm~~ 109 (160)
T 1yz4_A 77 IHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTV 109 (160)
T ss_dssp HHHHHHTTCCEEEEETTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCCchHHHHHHHHHHHH
Confidence 34444456667 999999999998889998654
No 64
>2x9a_A Attachment protein G3P; transmembrane, phage infection, phage recognition, HOST-VIRU interaction, virion; 2.47A {Enterobacteria phage IF1} PDB: 2x9b_A
Probab=20.14 E-value=25 Score=27.20 Aligned_cols=12 Identities=17% Similarity=0.053 Sum_probs=10.4
Q ss_pred cEEEEEcCchhH
Q 010507 149 MRIVVAGGDGTV 160 (508)
Q Consensus 149 ~~ivv~GGDGTv 160 (508)
.-|+|++||||+
T Consensus 39 tGViVg~~dgtv 50 (65)
T 2x9a_A 39 SGIGIGYDNDTS 50 (65)
T ss_dssp EEEEEEETTTTE
T ss_pred eeEEEECCCCCE
Confidence 359999999997
No 65
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=20.07 E-value=2.1e+02 Score=28.52 Aligned_cols=40 Identities=28% Similarity=0.274 Sum_probs=32.2
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcccCCCCCCCcEEEeeCCCCcchh
Q 010507 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (508)
Q Consensus 146 ~~~~~ivv~GGDGTv~~vl~~l~~~~~~~~~~~~pl~iiPlGTgNd~a 193 (508)
.+-+.+++.|||||..-+ ..|.+ ...|+--||-==-||+.
T Consensus 92 ~~Id~L~~IGGdgS~~~a-~~l~~-------~~i~vigiPkTIDNDl~ 131 (319)
T 4a3s_A 92 LGIEGLVVIGGDGSYMGA-KKLTE-------HGFPCVGVPGTIDNDIP 131 (319)
T ss_dssp HTCCEEEEEECTTHHHHH-HHHHH-------TTCCEEEEEEETTCCCT
T ss_pred cCCCEEEEeCCcHHHHHH-HHHhc-------cCCcEEEeeccccCCCC
Confidence 467899999999998765 45554 46788899999999996
Done!