Query 010508
Match_columns 508
No_of_seqs 240 out of 1360
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 01:21:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010508.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010508hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 8E-109 2E-113 862.9 34.2 404 75-500 27-453 (454)
2 PF00450 Peptidase_S10: Serine 100.0 2E-102 4E-107 822.8 31.6 391 85-494 1-415 (415)
3 PTZ00472 serine carboxypeptida 100.0 2E-101 4E-106 823.7 38.6 399 96-497 44-461 (462)
4 PLN03016 sinapoylglucose-malat 100.0 5.1E-98 1E-102 788.4 36.3 389 83-496 25-432 (433)
5 PLN02209 serine carboxypeptida 100.0 7.6E-97 2E-101 779.6 38.9 390 83-497 27-437 (437)
6 PLN02213 sinapoylglucose-malat 100.0 1.3E-73 2.7E-78 584.2 27.9 306 170-496 1-318 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 2.4E-71 5.2E-76 574.5 22.9 393 97-495 74-491 (498)
8 KOG1283 Serine carboxypeptidas 100.0 3.2E-66 7E-71 503.4 17.8 379 101-493 5-412 (414)
9 TIGR03611 RutD pyrimidine util 99.5 3.5E-12 7.5E-17 123.5 18.4 116 115-268 2-117 (257)
10 PRK10673 acyl-CoA esterase; Pr 99.4 2.8E-11 6E-16 118.5 20.6 104 121-263 10-113 (255)
11 TIGR01250 pro_imino_pep_2 prol 99.4 2.8E-11 6E-16 118.8 19.4 129 100-267 3-132 (288)
12 TIGR03056 bchO_mg_che_rel puta 99.3 6.9E-11 1.5E-15 116.6 19.1 107 125-268 26-132 (278)
13 PHA02857 monoglyceride lipase; 99.3 8.1E-11 1.7E-15 117.2 18.6 124 110-267 9-133 (276)
14 PF12697 Abhydrolase_6: Alpha/ 99.3 4.3E-11 9.2E-16 112.5 15.0 104 130-269 1-104 (228)
15 PLN02824 hydrolase, alpha/beta 99.3 1.6E-10 3.4E-15 116.5 19.6 105 127-266 29-137 (294)
16 PRK03204 haloalkane dehalogena 99.3 3.2E-10 6.9E-15 114.4 19.0 58 406-492 227-285 (286)
17 PLN02385 hydrolase; alpha/beta 99.2 6E-10 1.3E-14 115.5 20.2 127 109-266 69-197 (349)
18 PRK00870 haloalkane dehalogena 99.2 8.7E-10 1.9E-14 111.6 20.1 126 101-264 21-148 (302)
19 TIGR02427 protocat_pcaD 3-oxoa 99.2 1.7E-09 3.6E-14 103.5 20.8 59 406-493 193-251 (251)
20 PLN02679 hydrolase, alpha/beta 99.2 1E-09 2.2E-14 114.5 20.9 128 100-265 62-190 (360)
21 PLN02298 hydrolase, alpha/beta 99.2 5.6E-10 1.2E-14 114.6 17.2 137 98-267 31-170 (330)
22 TIGR03343 biphenyl_bphD 2-hydr 99.1 9.3E-09 2E-13 102.3 22.3 59 406-493 223-281 (282)
23 PRK10349 carboxylesterase BioH 99.1 1.5E-09 3.3E-14 106.8 16.2 59 406-493 196-254 (256)
24 PRK03592 haloalkane dehalogena 99.1 5.5E-10 1.2E-14 112.5 12.6 114 112-268 17-130 (295)
25 TIGR02240 PHA_depoly_arom poly 99.1 2.7E-09 5.8E-14 106.6 16.8 117 111-267 11-127 (276)
26 PLN03084 alpha/beta hydrolase 99.1 5.9E-09 1.3E-13 109.6 20.2 131 96-266 101-232 (383)
27 PRK11126 2-succinyl-6-hydroxy- 99.1 3.7E-09 8E-14 102.7 17.4 101 126-265 1-101 (242)
28 TIGR01738 bioH putative pimelo 99.1 3.2E-09 7E-14 101.3 15.4 58 406-492 188-245 (245)
29 PLN02652 hydrolase; alpha/beta 99.0 2.7E-08 5.9E-13 105.1 21.2 128 110-267 119-246 (395)
30 TIGR03695 menH_SHCHC 2-succiny 99.0 8.7E-09 1.9E-13 98.2 15.5 104 127-265 1-104 (251)
31 PLN03087 BODYGUARD 1 domain co 99.0 6.1E-08 1.3E-12 104.5 22.6 129 101-264 178-307 (481)
32 PLN02980 2-oxoglutarate decarb 99.0 2.2E-08 4.8E-13 122.4 21.3 116 114-264 1356-1478(1655)
33 PLN02578 hydrolase 99.0 3.5E-08 7.7E-13 102.6 19.4 111 112-265 76-186 (354)
34 PLN02894 hydrolase, alpha/beta 99.0 6.1E-08 1.3E-12 102.8 21.1 119 113-266 93-211 (402)
35 PRK07581 hypothetical protein; 98.9 1.4E-07 3.1E-12 97.2 22.7 59 406-493 275-334 (339)
36 PRK14875 acetoin dehydrogenase 98.9 6.6E-08 1.4E-12 100.3 19.0 103 125-265 129-231 (371)
37 TIGR01249 pro_imino_pep_1 prol 98.9 2.1E-07 4.6E-12 94.6 22.0 125 101-267 6-131 (306)
38 PRK08775 homoserine O-acetyltr 98.9 1.2E-07 2.6E-12 98.1 19.9 62 406-495 277-339 (343)
39 PRK10749 lysophospholipase L2; 98.8 1.4E-07 3.1E-12 97.1 17.2 124 111-266 40-166 (330)
40 PLN02965 Probable pheophorbida 98.8 8.9E-08 1.9E-12 94.5 13.8 59 406-493 193-251 (255)
41 KOG4178 Soluble epoxide hydrol 98.8 5E-07 1.1E-11 91.1 18.7 135 100-270 23-157 (322)
42 TIGR01607 PST-A Plasmodium sub 98.7 5.8E-07 1.3E-11 92.8 19.1 150 110-266 6-185 (332)
43 PRK06489 hypothetical protein; 98.7 6.9E-07 1.5E-11 93.1 19.1 59 406-494 292-356 (360)
44 PLN02511 hydrolase 98.7 1.2E-06 2.5E-11 92.6 19.6 92 126-241 99-193 (388)
45 COG1506 DAP2 Dipeptidyl aminop 98.7 3.4E-07 7.5E-12 102.3 16.1 122 105-245 369-493 (620)
46 PRK00175 metX homoserine O-ace 98.6 3.8E-06 8.2E-11 88.4 21.8 65 406-495 309-374 (379)
47 KOG4409 Predicted hydrolase/ac 98.6 2.9E-06 6.3E-11 86.1 18.9 112 124-269 87-198 (365)
48 KOG1454 Predicted hydrolase/ac 98.5 1.2E-06 2.6E-11 90.3 13.7 61 406-495 264-324 (326)
49 TIGR01392 homoserO_Ac_trn homo 98.5 1.7E-05 3.6E-10 82.4 22.0 63 406-493 288-351 (351)
50 PRK05077 frsA fermentation/res 98.5 6.7E-06 1.5E-10 87.6 19.3 79 171-267 223-301 (414)
51 PF00561 Abhydrolase_1: alpha/ 98.5 1.3E-06 2.9E-11 83.1 12.0 55 406-489 175-229 (230)
52 COG2267 PldB Lysophospholipase 98.5 1.1E-05 2.5E-10 82.1 18.6 128 110-269 18-145 (298)
53 PRK05855 short chain dehydroge 98.4 7.8E-06 1.7E-10 89.8 18.6 100 111-238 12-111 (582)
54 PLN02211 methyl indole-3-aceta 98.4 1.4E-05 3.1E-10 80.2 17.4 59 406-494 211-269 (273)
55 PRK10566 esterase; Provisional 98.4 1.5E-05 3.3E-10 78.0 16.9 108 114-241 13-127 (249)
56 PRK10985 putative hydrolase; P 98.3 9.2E-05 2E-09 76.1 21.7 93 126-241 57-151 (324)
57 PF00326 Peptidase_S9: Prolyl 98.2 1.2E-05 2.7E-10 77.0 12.0 93 169-272 13-105 (213)
58 TIGR03100 hydr1_PEP hydrolase, 98.2 6.8E-05 1.5E-09 75.2 17.8 78 171-267 58-135 (274)
59 COG0596 MhpC Predicted hydrola 98.2 6.4E-05 1.4E-09 70.7 16.3 61 404-492 219-279 (282)
60 PRK06765 homoserine O-acetyltr 98.1 0.00042 9.1E-09 73.3 22.0 65 406-495 323-388 (389)
61 PLN02442 S-formylglutathione h 97.9 0.00053 1.1E-08 69.3 17.5 47 406-477 217-264 (283)
62 PLN02872 triacylglycerol lipas 97.8 0.00028 6E-09 74.7 13.8 61 406-494 325-388 (395)
63 KOG1455 Lysophospholipase [Lip 97.7 0.0016 3.5E-08 65.4 16.7 127 109-265 35-163 (313)
64 TIGR03101 hydr2_PEP hydrolase, 97.6 0.0004 8.6E-09 69.6 11.1 130 110-273 8-141 (266)
65 PF10340 DUF2424: Protein of u 97.5 0.00012 2.5E-09 76.2 5.6 132 113-270 105-239 (374)
66 PF12695 Abhydrolase_5: Alpha/ 97.5 0.00071 1.5E-08 59.9 9.6 80 129-240 1-80 (145)
67 PRK11460 putative hydrolase; P 97.4 0.0027 5.9E-08 62.2 13.7 62 406-492 148-209 (232)
68 KOG2382 Predicted alpha/beta h 97.2 0.01 2.2E-07 60.3 15.2 62 404-494 251-312 (315)
69 PRK11071 esterase YqiA; Provis 97.2 0.0061 1.3E-07 57.9 12.5 54 406-493 136-189 (190)
70 TIGR01840 esterase_phb esteras 97.1 0.0021 4.5E-08 61.8 8.4 29 407-435 169-197 (212)
71 PRK10115 protease 2; Provision 97.0 0.017 3.8E-07 65.5 16.2 136 109-271 424-564 (686)
72 TIGR02821 fghA_ester_D S-formy 96.9 0.0073 1.6E-07 60.6 10.5 49 406-479 211-260 (275)
73 TIGR01838 PHA_synth_I poly(R)- 96.8 0.076 1.6E-06 58.4 18.1 85 171-269 221-305 (532)
74 TIGR01836 PHA_synth_III_C poly 96.7 0.04 8.7E-07 57.1 14.5 61 406-494 286-349 (350)
75 KOG2564 Predicted acetyltransf 96.4 0.0057 1.2E-07 60.7 6.1 88 125-235 72-160 (343)
76 KOG1515 Arylacetamide deacetyl 96.4 0.038 8.2E-07 57.2 12.3 126 109-267 69-208 (336)
77 COG0400 Predicted esterase [Ge 96.3 0.055 1.2E-06 52.2 12.1 59 406-494 146-204 (207)
78 PRK13604 luxD acyl transferase 96.3 0.45 9.8E-06 48.6 19.2 59 406-492 202-260 (307)
79 TIGR00976 /NonD putative hydro 96.1 0.038 8.3E-07 61.1 10.9 130 110-268 5-134 (550)
80 PF03583 LIP: Secretory lipase 96.0 0.18 4E-06 51.1 14.9 65 406-496 219-286 (290)
81 cd00707 Pancreat_lipase_like P 96.0 0.013 2.9E-07 59.0 6.1 110 124-263 33-144 (275)
82 KOG2100 Dipeptidyl aminopeptid 95.9 0.11 2.5E-06 59.5 14.2 115 112-245 508-628 (755)
83 PRK05371 x-prolyl-dipeptidyl a 95.9 0.11 2.5E-06 59.6 14.2 90 163-268 272-375 (767)
84 PLN00021 chlorophyllase 95.7 0.027 5.8E-07 57.9 7.3 112 125-265 50-165 (313)
85 TIGR03230 lipo_lipase lipoprot 95.7 0.037 8E-07 59.3 8.5 103 124-242 38-140 (442)
86 COG3208 GrsT Predicted thioest 95.7 0.14 3.1E-06 50.1 11.8 59 406-493 176-234 (244)
87 PF10230 DUF2305: Uncharacteri 95.5 0.1 2.2E-06 52.4 10.3 111 127-261 2-117 (266)
88 PF06500 DUF1100: Alpha/beta h 95.3 0.039 8.5E-07 58.3 7.0 108 125-266 188-296 (411)
89 PF07519 Tannase: Tannase and 95.3 0.47 1E-05 51.6 15.5 257 206-494 104-426 (474)
90 PF00975 Thioesterase: Thioest 95.2 0.044 9.6E-07 52.6 6.5 100 129-264 2-102 (229)
91 COG3509 LpqC Poly(3-hydroxybut 95.1 0.11 2.5E-06 52.2 8.9 144 112-287 45-202 (312)
92 PF03096 Ndr: Ndr family; Int 94.9 0.15 3.2E-06 51.4 9.2 119 126-280 22-144 (283)
93 PRK07868 acyl-CoA synthetase; 94.7 1.2 2.7E-05 52.8 18.1 62 406-496 297-362 (994)
94 KOG1838 Alpha/beta hydrolase [ 94.7 1.8 3.8E-05 45.9 16.9 178 42-266 48-236 (409)
95 PRK10162 acetyl esterase; Prov 94.5 0.075 1.6E-06 54.5 6.3 45 219-267 152-196 (318)
96 PF08386 Abhydrolase_4: TAP-li 94.2 0.13 2.9E-06 43.8 6.3 59 406-493 34-92 (103)
97 KOG2281 Dipeptidyl aminopeptid 94.2 0.66 1.4E-05 51.2 12.7 35 399-433 795-829 (867)
98 COG1647 Esterase/lipase [Gener 93.3 2.9 6.2E-05 40.7 14.0 61 406-493 181-242 (243)
99 TIGR03502 lipase_Pla1_cef extr 93.0 0.34 7.3E-06 55.6 8.5 98 126-241 448-575 (792)
100 PF10503 Esterase_phd: Esteras 92.0 0.92 2E-05 44.2 9.1 50 207-266 83-132 (220)
101 PLN02454 triacylglycerol lipas 90.9 0.53 1.1E-05 49.9 6.6 70 195-267 203-272 (414)
102 cd00312 Esterase_lipase Estera 90.3 0.74 1.6E-05 49.9 7.4 35 204-239 160-194 (493)
103 PF02230 Abhydrolase_2: Phosph 89.9 0.44 9.6E-06 45.8 4.7 59 406-493 155-213 (216)
104 COG0657 Aes Esterase/lipase [L 89.2 2.4 5.3E-05 43.0 9.8 65 200-270 129-195 (312)
105 KOG4391 Predicted alpha/beta h 88.6 2 4.4E-05 41.6 7.9 108 126-267 77-185 (300)
106 PF02129 Peptidase_S15: X-Pro 88.5 0.52 1.1E-05 47.0 4.2 96 171-289 58-153 (272)
107 KOG3975 Uncharacterized conser 88.2 0.98 2.1E-05 44.5 5.6 102 125-247 27-132 (301)
108 PF01764 Lipase_3: Lipase (cla 87.6 0.86 1.9E-05 40.2 4.6 61 200-266 46-106 (140)
109 COG4099 Predicted peptidase [G 87.0 6 0.00013 40.2 10.4 118 108-243 168-291 (387)
110 PF02230 Abhydrolase_2: Phosph 86.4 1.7 3.6E-05 41.7 6.3 54 203-268 89-142 (216)
111 PF05728 UPF0227: Uncharacteri 86.0 1.5 3.2E-05 41.7 5.5 53 205-273 46-98 (187)
112 PLN02571 triacylglycerol lipas 85.6 2.1 4.5E-05 45.5 6.8 69 198-267 204-276 (413)
113 PRK10252 entF enterobactin syn 85.0 3.9 8.5E-05 49.8 9.9 91 126-245 1067-1157(1296)
114 PF08538 DUF1749: Protein of u 84.9 5.9 0.00013 40.4 9.5 69 197-271 83-153 (303)
115 PF07859 Abhydrolase_3: alpha/ 84.5 1.5 3.2E-05 41.4 4.9 64 199-268 47-112 (211)
116 KOG2984 Predicted hydrolase [G 84.3 5.4 0.00012 38.3 8.2 60 406-494 216-275 (277)
117 cd00741 Lipase Lipase. Lipase 83.6 2.5 5.4E-05 38.1 5.7 43 200-245 10-52 (153)
118 KOG4627 Kynurenine formamidase 83.5 1.8 3.9E-05 41.6 4.7 72 180-266 101-172 (270)
119 KOG2931 Differentiation-relate 82.8 34 0.00073 34.9 13.5 35 463-497 274-308 (326)
120 PF05577 Peptidase_S28: Serine 82.6 5.1 0.00011 42.8 8.5 96 171-277 60-159 (434)
121 cd00519 Lipase_3 Lipase (class 82.4 2.5 5.5E-05 40.8 5.6 59 200-266 110-168 (229)
122 PLN02753 triacylglycerol lipas 81.6 3.4 7.4E-05 45.1 6.6 73 195-267 284-360 (531)
123 PF05677 DUF818: Chlamydia CHL 81.6 4.1 8.8E-05 42.2 6.8 64 169-244 170-234 (365)
124 PLN02719 triacylglycerol lipas 81.6 3.3 7.1E-05 45.1 6.4 70 197-266 272-345 (518)
125 PF11144 DUF2920: Protein of u 81.2 2.8 6E-05 44.3 5.6 62 200-271 162-224 (403)
126 PF12146 Hydrolase_4: Putative 79.9 8.9 0.00019 30.9 7.1 76 113-208 3-78 (79)
127 PF07819 PGAP1: PGAP1-like pro 79.3 29 0.00063 33.7 11.8 123 126-271 3-129 (225)
128 KOG2183 Prolylcarboxypeptidase 79.3 4.5 9.7E-05 42.8 6.3 66 170-238 111-184 (492)
129 smart00824 PKS_TE Thioesterase 79.0 8.8 0.00019 35.2 7.9 65 169-245 24-88 (212)
130 PF00151 Lipase: Lipase; Inte 76.4 0.79 1.7E-05 47.5 -0.1 71 169-244 103-173 (331)
131 PRK04940 hypothetical protein; 76.3 5.2 0.00011 37.8 5.3 42 221-275 60-101 (180)
132 PF03283 PAE: Pectinacetyleste 75.6 30 0.00065 36.3 11.3 125 116-245 39-180 (361)
133 KOG1553 Predicted alpha/beta h 75.0 14 0.0003 38.4 8.2 102 126-264 242-343 (517)
134 PLN02324 triacylglycerol lipas 74.4 7.9 0.00017 41.2 6.7 70 196-266 191-265 (415)
135 PF06057 VirJ: Bacterial virul 74.1 4.2 9E-05 38.7 4.1 101 127-265 2-106 (192)
136 KOG3101 Esterase D [General fu 73.4 34 0.00073 33.3 9.9 117 108-235 22-155 (283)
137 PLN02761 lipase class 3 family 73.2 8.4 0.00018 42.1 6.6 71 196-266 266-342 (527)
138 KOG4667 Predicted esterase [Li 72.0 45 0.00098 32.6 10.5 82 173-267 65-146 (269)
139 PLN02733 phosphatidylcholine-s 70.8 12 0.00027 40.2 7.3 40 199-241 143-182 (440)
140 PF11288 DUF3089: Protein of u 70.3 6.7 0.00014 37.9 4.6 43 200-244 76-118 (207)
141 KOG2182 Hydrolytic enzymes of 70.1 43 0.00093 36.4 10.9 43 196-242 147-189 (514)
142 KOG1552 Predicted alpha/beta h 69.4 6.8 0.00015 38.9 4.5 60 406-494 192-251 (258)
143 PF05990 DUF900: Alpha/beta hy 69.4 8.8 0.00019 37.6 5.4 67 200-270 75-141 (233)
144 PF05448 AXE1: Acetyl xylan es 68.3 8.1 0.00018 39.8 5.1 56 406-489 262-318 (320)
145 PF08237 PE-PPE: PE-PPE domain 68.1 16 0.00035 35.7 6.8 87 172-266 4-90 (225)
146 PRK10439 enterobactin/ferric e 67.8 21 0.00046 38.1 8.3 22 221-242 288-309 (411)
147 COG0429 Predicted hydrolase of 65.1 56 0.0012 33.8 10.2 114 122-265 70-185 (345)
148 PLN02310 triacylglycerol lipas 63.5 14 0.00031 39.2 5.9 64 199-267 186-250 (405)
149 PF10081 Abhydrolase_9: Alpha/ 61.9 18 0.00038 36.6 5.8 35 198-232 86-120 (289)
150 PF06821 Ser_hydrolase: Serine 61.4 14 0.00031 34.3 4.9 43 407-479 115-157 (171)
151 PF08840 BAAT_C: BAAT / Acyl-C 60.6 12 0.00026 36.0 4.4 36 208-243 9-44 (213)
152 PRK14567 triosephosphate isome 59.4 20 0.00043 35.7 5.7 69 180-269 170-238 (253)
153 PF06342 DUF1057: Alpha/beta h 59.0 84 0.0018 31.9 10.0 92 399-492 205-296 (297)
154 COG0627 Predicted esterase [Ge 58.9 20 0.00044 36.9 5.9 113 126-243 52-174 (316)
155 COG3319 Thioesterase domains o 56.9 59 0.0013 32.5 8.6 88 128-245 1-89 (257)
156 COG1073 Hydrolases of the alph 56.9 23 0.0005 34.4 5.8 62 407-495 233-297 (299)
157 PLN02408 phospholipase A1 55.7 17 0.00037 38.2 4.7 45 199-244 179-223 (365)
158 PLN00413 triacylglycerol lipas 55.7 13 0.00029 40.1 4.0 39 203-244 269-307 (479)
159 COG4757 Predicted alpha/beta h 55.5 25 0.00055 34.6 5.5 64 171-238 58-122 (281)
160 KOG2551 Phospholipase/carboxyh 54.8 16 0.00036 35.5 4.1 64 406-501 163-226 (230)
161 PF05057 DUF676: Putative seri 54.6 18 0.00039 34.9 4.5 48 198-246 56-103 (217)
162 PF01738 DLH: Dienelactone hyd 51.9 48 0.001 31.4 7.0 61 406-491 145-210 (218)
163 PLN02162 triacylglycerol lipas 50.4 20 0.00044 38.7 4.3 39 203-244 263-301 (475)
164 PRK14566 triosephosphate isome 49.7 34 0.00073 34.3 5.5 59 200-269 190-248 (260)
165 PF11187 DUF2974: Protein of u 49.6 27 0.00058 34.1 4.8 38 203-244 70-107 (224)
166 PLN02934 triacylglycerol lipas 49.6 22 0.00049 38.8 4.6 40 202-244 305-344 (515)
167 COG3596 Predicted GTPase [Gene 49.1 24 0.00052 35.6 4.4 59 126-186 37-101 (296)
168 PLN03037 lipase class 3 family 48.4 38 0.00082 37.2 6.0 46 200-245 296-342 (525)
169 KOG4569 Predicted lipase [Lipi 48.0 33 0.00072 35.6 5.5 58 203-266 156-213 (336)
170 PLN02847 triacylglycerol lipas 47.2 32 0.00069 38.4 5.3 61 201-269 234-295 (633)
171 KOG1552 Predicted alpha/beta h 46.2 54 0.0012 32.7 6.3 105 126-268 59-165 (258)
172 PF03959 FSH1: Serine hydrolas 45.6 23 0.00049 33.9 3.6 49 406-483 161-209 (212)
173 PF07389 DUF1500: Protein of u 45.5 16 0.00034 30.1 2.0 28 202-231 7-34 (100)
174 PF05049 IIGP: Interferon-indu 45.0 7.4 0.00016 41.0 0.1 57 126-183 33-97 (376)
175 PLN02802 triacylglycerol lipas 44.1 42 0.00091 36.7 5.6 63 199-266 309-371 (509)
176 PLN02429 triosephosphate isome 43.9 41 0.00089 34.6 5.3 69 180-269 230-299 (315)
177 KOG3079 Uridylate kinase/adeny 43.5 13 0.00028 35.2 1.4 16 126-141 6-21 (195)
178 COG2945 Predicted hydrolase of 37.6 37 0.00079 32.5 3.5 56 180-243 69-125 (210)
179 PF06309 Torsin: Torsin; Inte 36.8 25 0.00053 31.3 2.1 16 124-139 49-64 (127)
180 PF00681 Plectin: Plectin repe 36.0 23 0.00051 25.2 1.5 32 264-295 12-43 (45)
181 PF12740 Chlorophyllase2: Chlo 35.7 1.5E+02 0.0031 29.8 7.5 38 222-264 92-129 (259)
182 PRK06762 hypothetical protein; 34.0 29 0.00064 31.4 2.3 21 128-148 2-24 (166)
183 TIGR03712 acc_sec_asp2 accesso 34.0 2.2E+02 0.0047 31.2 8.9 101 126-267 288-391 (511)
184 PF02450 LCAT: Lecithin:choles 33.9 44 0.00096 35.3 3.9 24 220-243 118-141 (389)
185 PF08840 BAAT_C: BAAT / Acyl-C 33.7 43 0.00094 32.1 3.5 48 406-476 115-163 (213)
186 COG2272 PnbA Carboxylesterase 33.2 2.3E+02 0.0049 31.0 8.9 31 207-238 167-197 (491)
187 PF06259 Abhydrolase_8: Alpha/ 32.8 1.1E+02 0.0024 28.8 5.9 66 169-241 62-129 (177)
188 cd00311 TIM Triosephosphate is 32.3 1E+02 0.0023 30.4 5.9 58 200-269 177-235 (242)
189 PRK01184 hypothetical protein; 31.2 35 0.00076 31.5 2.3 27 129-155 2-30 (184)
190 COG2945 Predicted hydrolase of 30.7 80 0.0017 30.3 4.5 56 406-492 149-204 (210)
191 KOG3877 NADH:ubiquinone oxidor 30.0 58 0.0013 33.0 3.6 49 167-232 67-115 (393)
192 PRK14731 coaE dephospho-CoA ki 29.7 60 0.0013 31.0 3.7 32 126-157 3-36 (208)
193 PLN02561 triosephosphate isome 29.3 91 0.002 31.1 4.9 58 200-268 181-239 (253)
194 KOG1516 Carboxylesterase and r 29.3 1.3E+02 0.0028 33.0 6.7 19 220-238 194-212 (545)
195 COG3673 Uncharacterized conser 29.2 49 0.0011 34.1 3.0 65 170-239 65-140 (423)
196 PF01555 N6_N4_Mtase: DNA meth 29.2 79 0.0017 29.6 4.5 40 172-214 2-41 (231)
197 PRK14565 triosephosphate isome 28.3 98 0.0021 30.6 4.9 52 200-270 175-226 (237)
198 KOG3724 Negative regulator of 28.1 62 0.0014 37.3 3.8 95 126-234 88-195 (973)
199 COG3946 VirJ Type IV secretory 27.6 79 0.0017 33.7 4.3 47 195-244 303-349 (456)
200 PRK00042 tpiA triosephosphate 24.8 1.5E+02 0.0033 29.4 5.6 59 200-270 181-240 (250)
201 PF10929 DUF2811: Protein of u 24.6 65 0.0014 24.5 2.2 22 199-220 5-26 (57)
202 PF00756 Esterase: Putative es 24.2 36 0.00079 32.8 1.1 51 208-269 102-153 (251)
203 COG3150 Predicted esterase [Ge 24.0 1.1E+02 0.0025 28.7 4.2 62 193-274 38-99 (191)
204 PF01083 Cutinase: Cutinase; 23.7 1E+02 0.0022 28.8 3.9 85 171-269 40-126 (179)
205 KOG3043 Predicted hydrolase re 23.5 1.9E+02 0.0041 28.5 5.7 28 406-433 164-191 (242)
206 PF01738 DLH: Dienelactone hyd 23.5 55 0.0012 31.0 2.2 95 125-240 12-117 (218)
207 PF06414 Zeta_toxin: Zeta toxi 23.5 70 0.0015 30.1 2.9 23 126-148 13-37 (199)
208 PF09292 Neil1-DNA_bind: Endon 22.9 50 0.0011 22.8 1.2 11 128-138 25-35 (39)
209 KOG2565 Predicted hydrolases o 22.8 2.7E+02 0.0058 29.6 7.0 116 127-270 153-268 (469)
210 PRK14734 coaE dephospho-CoA ki 22.7 90 0.0019 29.7 3.4 28 129-156 2-31 (200)
211 PRK11524 putative methyltransf 22.3 2.2E+02 0.0048 28.5 6.4 52 169-226 26-79 (284)
212 PF03403 PAF-AH_p_II: Platelet 22.0 47 0.001 35.1 1.5 29 126-154 99-131 (379)
213 TIGR02821 fghA_ester_D S-formy 21.9 91 0.002 30.9 3.5 52 206-268 123-175 (275)
214 PF10503 Esterase_phd: Esteras 21.8 75 0.0016 30.9 2.7 27 406-432 169-195 (220)
215 PRK00081 coaE dephospho-CoA ki 21.8 95 0.002 29.2 3.4 29 128-156 2-32 (194)
216 COG4782 Uncharacterized protei 21.7 1.5E+02 0.0032 31.2 4.9 49 220-270 190-238 (377)
217 PF03959 FSH1: Serine hydrolas 21.4 1.3E+02 0.0027 28.7 4.3 63 200-268 85-147 (212)
218 PTZ00333 triosephosphate isome 20.9 1.6E+02 0.0034 29.4 4.9 59 199-268 183-242 (255)
219 PRK14733 coaE dephospho-CoA ki 20.9 96 0.0021 29.8 3.2 30 126-155 4-36 (204)
220 PF01583 APS_kinase: Adenylyls 20.7 57 0.0012 30.0 1.5 13 127-139 1-13 (156)
221 KOG2682 NAD-dependent histone 20.2 49 0.0011 32.6 1.0 67 171-244 37-113 (314)
222 cd02022 DPCK Dephospho-coenzym 20.2 82 0.0018 29.1 2.6 21 130-150 1-23 (179)
223 PRK14738 gmk guanylate kinase; 20.1 99 0.0021 29.4 3.2 28 124-151 9-38 (206)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=8e-109 Score=862.93 Aligned_cols=404 Identities=39% Similarity=0.715 Sum_probs=351.6
Q ss_pred CCceEEEeecCCCCCCCCCCCccceeeEeEEcCCCCCccEEEEEEeccCCC-CCCEEEEECCCCCchhhhhhhhcCCCeE
Q 010508 75 PKLVEKQLSLNPLGDPGPSVQEFGHHAGYYTLPHSQSARMFYFFFESRNNK-SDPVVIWLTGGPGCSSELALFYENGPFH 153 (508)
Q Consensus 75 ~~~~~~~~~~p~~~~~~~~~~~~~~~sGy~~v~~~~~~~lFy~ffes~~~~-~dPlvlWlnGGPGcSS~~glf~E~GP~~ 153 (508)
..+|++ |||+.... +|+||||||+|+++.+++||||||||+++| +|||||||||||||||+.|+|+|+|||+
T Consensus 27 ~~~I~~---LPG~~~~~----~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~ 99 (454)
T KOG1282|consen 27 ADLIKS---LPGQPGPL----PFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFR 99 (454)
T ss_pred hhhhhc---CCCCCCCC----CcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeE
Confidence 345554 99987655 589999999999989999999999999998 8999999999999999999999999999
Q ss_pred EeCC-CcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccc
Q 010508 154 IANN-LSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAG 232 (508)
Q Consensus 154 i~~~-~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG 232 (508)
++.+ .+|..|+|||||.|||||||||+||||||+++..++.++|+++|+|+|+||++||++||||++|||||+||||||
T Consensus 100 v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG 179 (454)
T KOG1282|consen 100 VKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAG 179 (454)
T ss_pred EcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccc
Confidence 9965 679999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHhcccccccceEeeeeeeccCCCCChhhhhhhHHHHHhhhcccchhhHHHHHHhhhhhHHHHHhhcCCCC
Q 010508 233 HYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAIQYKEYTEYALNMRLIKQSDYESINKLIPTCEHAIKTCESDGG 312 (508)
Q Consensus 233 ~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~i~~~~~~c~~~i~~c~~~~~ 312 (508)
||||+||++|+++|+...++.|||||++||||++|+..|+.++.+|++.||+|++++++.+++.+..|...+
T Consensus 180 ~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~-------- 251 (454)
T KOG1282|consen 180 HYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNY-------- 251 (454)
T ss_pred eehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccc--------
Confidence 999999999999998656678999999999999999999999999999999999999999998422221111
Q ss_pred CcccchHHHHHHHHHHHH-hhcCCCccccc-ccccCC--------------CCCCCchHHHHHhChHHHHHHhCCCc--c
Q 010508 313 DACSSSYAVCNSIFNKIL-GIAGDVNYYDI-RKKCEG--------------DLCYDFSNMERFLNEKSVREALGVGD--I 374 (508)
Q Consensus 313 ~~c~~a~~~c~~i~~~i~-~~~g~~N~Ydi-r~~c~~--------------~~c~~~~~~~~yLN~~~Vr~AL~v~~--~ 374 (508)
..|......|.++++.+. ...++++.|++ +..|.. +.|++... ++|||+++||+||||+. .
T Consensus 252 ~~~~~~~~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~~~~~~~~~~~~c~~~~~-~~ylN~~~VrkALh~~~~~~ 330 (454)
T KOG1282|consen 252 ANVDPSNTKCNKAVEEFDSKTTGDIDNYYILTPDCYPTSYELKKPTDCYGYDPCLSDYA-EKYLNRPEVRKALHANKTSI 330 (454)
T ss_pred cccCCchhHHHHHHHHHHHHHhccCchhhhcchhhccccccccccccccccCCchhhhH-HHhcCCHHHHHHhCCCCCCC
Confidence 123334677998888877 55567777766 455763 45665433 89999999999999983 2
Q ss_pred -cccccchhhHhhhhcccccccccchhhhhcCC-ceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeC-
Q 010508 375 -DFVSCSSTVYEAMLMDWMRNFEVGIPTLLEDG-IRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVD- 451 (508)
Q Consensus 375 -~~~~cs~~V~~~~~~D~~~~~~~~i~~LL~~g-irVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~- 451 (508)
+|+.||..|+..+.. -..++.+.+..++.++ +|||||+||.|++||++|+++||++|+++ ..++|+||+++
T Consensus 331 ~~W~~Cn~~v~~~~~~-~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~-----~~~~~~pW~~~~ 404 (454)
T KOG1282|consen 331 GKWERCNDEVNYNYND-DIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLS-----ITDEWRPWYHKG 404 (454)
T ss_pred CcccccChhhhccccc-CccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCc-----cccCccCCccCC
Confidence 699999999765443 3334555566777654 99999999999999999999999999955 57899999995
Q ss_pred CeeeeEEEEecCeEEEEEcCCCccCCccChHHHHHHHHHHHcCCcCCCc
Q 010508 452 GAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASLQMLQSWMQGKLAMTW 500 (508)
Q Consensus 452 g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~~ml~~fl~g~~~~~~ 500 (508)
+|+|||+++|++|||+||+|||||||.|||++|++||++||.|+++-..
T Consensus 405 ~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~~ 453 (454)
T KOG1282|consen 405 GQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQRFLNGQPLPST 453 (454)
T ss_pred CceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHHHHcCCCCCCC
Confidence 8999999999999999999999999999999999999999999986543
No 2
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=1.7e-102 Score=822.78 Aligned_cols=391 Identities=44% Similarity=0.860 Sum_probs=329.9
Q ss_pred CCCCCCCCCCCccceeeEeEEcCCCCCccEEEEEEeccCCC-CCCEEEEECCCCCchhhhhhhhcCCCeEEe--CCCccc
Q 010508 85 NPLGDPGPSVQEFGHHAGYYTLPHSQSARMFYFFFESRNNK-SDPVVIWLTGGPGCSSELALFYENGPFHIA--NNLSLV 161 (508)
Q Consensus 85 p~~~~~~~~~~~~~~~sGy~~v~~~~~~~lFy~ffes~~~~-~dPlvlWlnGGPGcSS~~glf~E~GP~~i~--~~~~l~ 161 (508)
||++... ++++|||||+|+.+.+++||||||||++++ ++|||||||||||||||.|+|.|||||+++ .+.+++
T Consensus 1 pg~~~~~----~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~ 76 (415)
T PF00450_consen 1 PGLDEPV----PFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLE 76 (415)
T ss_dssp TT-SS-S----SSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEE
T ss_pred CCCCCCC----CceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeeccccccc
Confidence 7887775 579999999999788899999999999988 999999999999999999999999999999 358999
Q ss_pred ccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHH
Q 010508 162 WNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASR 241 (508)
Q Consensus 162 ~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~ 241 (508)
.|+|||++.|||||||||+||||||+++..++.++++++|+|+++||++||.+||+|+++||||+||||||||||.+|.+
T Consensus 77 ~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~ 156 (415)
T PF00450_consen 77 DNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASY 156 (415)
T ss_dssp E-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHH
T ss_pred ccccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHh
Confidence 99999999999999999999999999887777889999999999999999999999999999999999999999999999
Q ss_pred HHhcccccccceEeeeeeeccCCCCChhhhhhhHHHHHhhhcccchhhHHHHHHhhhhhHHHHHhhcCCCCCcccchHHH
Q 010508 242 VHKGNKEKQGIHINLKGFAIGNGLTDPAIQYKEYTEYALNMRLIKQSDYESINKLIPTCEHAIKTCESDGGDACSSSYAV 321 (508)
Q Consensus 242 i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~i~~~~~~c~~~i~~c~~~~~~~c~~a~~~ 321 (508)
|+++|+....+.||||||+||||++||..|+.++.+|++.+|+|++++++.+++.+..| ..|......
T Consensus 157 i~~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~------------~~~~~~~~~ 224 (415)
T PF00450_consen 157 ILQQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEAC------------PQCQKAITE 224 (415)
T ss_dssp HHHHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTS------------HSSSCCHHH
T ss_pred hhhccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhcc------------ccccchhhH
Confidence 99999876567899999999999999999999999999999999999999988753222 234455566
Q ss_pred HHHHHHHHHh------hcCCCcccccccccC-----------CCCCCCchHHHHHhChHHHHHHhCCC---cccccccch
Q 010508 322 CNSIFNKILG------IAGDVNYYDIRKKCE-----------GDLCYDFSNMERFLNEKSVREALGVG---DIDFVSCSS 381 (508)
Q Consensus 322 c~~i~~~i~~------~~g~~N~Ydir~~c~-----------~~~c~~~~~~~~yLN~~~Vr~AL~v~---~~~~~~cs~ 381 (508)
|.+....+.. ..+++|.||++..|. ...|.+...+..|||+++||+||||+ ...|..|+.
T Consensus 225 c~~~~~~~~~~~~~~~~~~~~n~Ydi~~~~~~~~~~~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~ 304 (415)
T PF00450_consen 225 CAAALDELSCQYAISQCNGGINPYDIRQPCYNPSRSSYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCND 304 (415)
T ss_dssp HHHHHHHHHHHCHHHHHHTTSETTSTTSEETT-SHCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-H
T ss_pred HHHHHHhhhhhcccccccCCcceeeeeccccccccccccccccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCc
Confidence 6665554433 458999999999992 24566778899999999999999996 579999999
Q ss_pred hh-HhhhhcccccccccchhhhhcCCceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEE
Q 010508 382 TV-YEAMLMDWMRNFEVGIPTLLEDGIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKS 460 (508)
Q Consensus 382 ~V-~~~~~~D~~~~~~~~i~~LL~~girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~ 460 (508)
.| +..+..|.+.+....++.||++++|||||+||.|++||+.|+++|+++|+|++++.|+.++++ .+++++||+|+
T Consensus 305 ~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~---~~~~~~G~~k~ 381 (415)
T PF00450_consen 305 AVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRK---VNGQVAGYVKQ 381 (415)
T ss_dssp HHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEE---TTCSEEEEEEE
T ss_pred ccccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCccccccccccc---ccccccceeEE
Confidence 99 666677889999999999999999999999999999999999999999999999888777766 68999999999
Q ss_pred ecCeEEEEEcCCCccCCccChHHHHHHHHHHHcC
Q 010508 461 HGPLTFLKVHDAGHMVPMDQPKASLQMLQSWMQG 494 (508)
Q Consensus 461 ~~~Ltf~~V~~AGHmvP~DqP~~a~~ml~~fl~g 494 (508)
+++|||++|++||||||+|||+++++||++||+|
T Consensus 382 ~~~ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 382 YGNLTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp ETTEEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred eccEEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999987
No 3
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=1.7e-101 Score=823.69 Aligned_cols=399 Identities=43% Similarity=0.891 Sum_probs=370.4
Q ss_pred ccceeeEeEEcCC-CCCccEEEEEEeccCCC-CCCEEEEECCCCCchhhhhhhhcCCCeEEeCC-CcccccCCCCCCCce
Q 010508 96 EFGHHAGYYTLPH-SQSARMFYFFFESRNNK-SDPVVIWLTGGPGCSSELALFYENGPFHIANN-LSLVWNDYGWDKASN 172 (508)
Q Consensus 96 ~~~~~sGy~~v~~-~~~~~lFy~ffes~~~~-~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~-~~l~~N~~sW~k~an 172 (508)
++++||||++|+. ..+++||||||||++++ ++||||||||||||||+.|+|.|||||+|+++ .++..|+|||++.+|
T Consensus 44 ~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~ 123 (462)
T PTZ00472 44 SVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAY 123 (462)
T ss_pred CCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccC
Confidence 4688999999975 45689999999999888 99999999999999999999999999999986 689999999999999
Q ss_pred EEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccc
Q 010508 173 LLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGI 252 (508)
Q Consensus 173 vLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~ 252 (508)
|||||||+||||||++.. ++..+++++|+|+++||+.||++||+|+.++|||+||||||+|+|.+|.+|+++|+.++++
T Consensus 124 ~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~ 202 (462)
T PTZ00472 124 VIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGL 202 (462)
T ss_pred eEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCc
Confidence 999999999999998654 4667788999999999999999999999999999999999999999999999999876678
Q ss_pred eEeeeeeeccCCCCChhhhhhhHHHHHhh-------hcccchhhHHHHHHhhhhhHHHHHhhcCC---CCCcccchHHHH
Q 010508 253 HINLKGFAIGNGLTDPAIQYKEYTEYALN-------MRLIKQSDYESINKLIPTCEHAIKTCESD---GGDACSSSYAVC 322 (508)
Q Consensus 253 ~inLkGi~IGNg~~dp~~q~~~~~~~a~~-------~glI~~~~~~~i~~~~~~c~~~i~~c~~~---~~~~c~~a~~~c 322 (508)
+||||||+||||++||.+|+.+|.+|++. +|+|++++++++++..+.|.+.++.|... ....|..+...|
T Consensus 203 ~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~a~~~c 282 (462)
T PTZ00472 203 YINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSVARALC 282 (462)
T ss_pred eeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHHHHHHH
Confidence 99999999999999999999999999995 58999999999999999999999999863 345688888889
Q ss_pred HHHHHHHHhhcCCCcccccccccCCCCCCCchHHHHHhChHHHHHHhCCCcccccccchhhHhhhhcccccccccchhhh
Q 010508 323 NSIFNKILGIAGDVNYYDIRKKCEGDLCYDFSNMERFLNEKSVREALGVGDIDFVSCSSTVYEAMLMDWMRNFEVGIPTL 402 (508)
Q Consensus 323 ~~i~~~i~~~~g~~N~Ydir~~c~~~~c~~~~~~~~yLN~~~Vr~AL~v~~~~~~~cs~~V~~~~~~D~~~~~~~~i~~L 402 (508)
..+...+ . .+++|.||||..|..+.|++...+++|||+++||+||||+...|..|+..|+..+..|++++....|+.|
T Consensus 283 ~~~~~~~-~-~~g~n~Ydi~~~c~~~~c~~~~~~~~yLN~~~Vq~AL~v~~~~w~~c~~~V~~~~~~D~~~~~~~~l~~L 360 (462)
T PTZ00472 283 NEYIAVY-S-ATGLNNYDIRKPCIGPLCYNMDNTIAFMNREDVQSSLGVKPATWQSCNMEVNLMFEMDWMKNFNYTVPGL 360 (462)
T ss_pred HHHHHHH-H-hcCCChhheeccCCCCCccCHHHHHHHhCCHHHHHHhCCCCCCceeCCHHHHHHhhhccccchHHHHHHH
Confidence 8765433 2 4679999999999988999888899999999999999998778999999999999999999998899999
Q ss_pred hcCCceEEEEeecCcccCchhhHHHHHhccccccccccccCcceee-eeCCeeeeEEEEec-----CeEEEEEcCCCccC
Q 010508 403 LEDGIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPF-KVDGAETGQIKSHG-----PLTFLKVHDAGHMV 476 (508)
Q Consensus 403 L~~girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw-~v~g~~aG~~k~~~-----~Ltf~~V~~AGHmv 476 (508)
|++|+|||||+||.|++||+.|+++|+++|+|+|+++|++++++|| .++++++||+|+++ +|+|++|++|||||
T Consensus 361 L~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~v 440 (462)
T PTZ00472 361 LEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMV 440 (462)
T ss_pred HhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccC
Confidence 9999999999999999999999999999999999999999999999 57999999999999 99999999999999
Q ss_pred CccChHHHHHHHHHHHcCCcC
Q 010508 477 PMDQPKASLQMLQSWMQGKLA 497 (508)
Q Consensus 477 P~DqP~~a~~ml~~fl~g~~~ 497 (508)
|+|||+++++|+++|+.|+++
T Consensus 441 p~d~P~~~~~~i~~fl~~~~~ 461 (462)
T PTZ00472 441 PMDQPAVALTMINRFLRNRPL 461 (462)
T ss_pred hhhHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999753
No 4
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=5.1e-98 Score=788.42 Aligned_cols=389 Identities=29% Similarity=0.571 Sum_probs=336.3
Q ss_pred ecCCCCCCCCCCCccceeeEeEEcCCCCCccEEEEEEeccCCC-CCCEEEEECCCCCchhhhhhhhcCCCeEEeCC----
Q 010508 83 SLNPLGDPGPSVQEFGHHAGYYTLPHSQSARMFYFFFESRNNK-SDPVVIWLTGGPGCSSELALFYENGPFHIANN---- 157 (508)
Q Consensus 83 ~~p~~~~~~~~~~~~~~~sGy~~v~~~~~~~lFy~ffes~~~~-~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~---- 157 (508)
+|||++... .+.+||||++|++..+.+||||||||++++ ++||||||||||||||+.|+|+|+|||+++.+
T Consensus 25 ~lpg~~~~~----~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~ 100 (433)
T PLN03016 25 FLPGFEGPL----PFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNG 100 (433)
T ss_pred cCcCCCCCC----CeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCC
Confidence 599986554 479999999998777789999999999888 99999999999999999999999999998642
Q ss_pred --CcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccch
Q 010508 158 --LSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYI 235 (508)
Q Consensus 158 --~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yv 235 (508)
.++.+|++||++.|||||||||+||||||+++..+... +++.|+|+++||++||++||+|+++||||+|||||||||
T Consensus 101 ~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~-d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yv 179 (433)
T PLN03016 101 SAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTG-DISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIV 179 (433)
T ss_pred CCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccC-CHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceeh
Confidence 57999999999999999999999999999877655544 444569999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccccceEeeeeeeccCCCCChhhhhhhHHHHHhhhcccchhhHHHHHHhhhhhHHHHHhhcCCCCCcc
Q 010508 236 PAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAIQYKEYTEYALNMRLIKQSDYESINKLIPTCEHAIKTCESDGGDAC 315 (508)
Q Consensus 236 P~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~i~~~~~~c~~~i~~c~~~~~~~c 315 (508)
|++|++|+++|+..+..+||||||+||||+++|..|..++.+|++.+|||++++++.+++. |..... .|
T Consensus 180 P~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~---c~~~~~--------~~ 248 (433)
T PLN03016 180 PALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRI---CNGNYY--------NV 248 (433)
T ss_pred HHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHH---hccccc--------cC
Confidence 9999999999876566789999999999999999999999999999999999999999874 432211 23
Q ss_pred cchHHHHHHHHHHHHhhcCCCcccccccc-cCC-----CCCCC--chHHHHHhChHHHHHHhCCC---cccccccchhhH
Q 010508 316 SSSYAVCNSIFNKILGIAGDVNYYDIRKK-CEG-----DLCYD--FSNMERFLNEKSVREALGVG---DIDFVSCSSTVY 384 (508)
Q Consensus 316 ~~a~~~c~~i~~~i~~~~g~~N~Ydir~~-c~~-----~~c~~--~~~~~~yLN~~~Vr~AL~v~---~~~~~~cs~~V~ 384 (508)
..+...|..++..+....+.+|.|||+.+ |.. +.|+. ...+++|||+++||+||||+ ..+|..|+..|.
T Consensus 249 ~~~~~~C~~~~~~~~~~~~~~n~yni~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~cn~~v~ 328 (433)
T PLN03016 249 DPSNTQCLKLTEEYHKCTAKINIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIP 328 (433)
T ss_pred CCchHHHHHHHHHHHHHhcCCChhhccCCcccccccCCCcccccchHHHHHHhCCHHHHHHhCCCCCCCCCCccCCcccc
Confidence 34567798888877778889999999844 532 24764 35679999999999999997 368999999986
Q ss_pred hhhhcccccccccchhhhhcCCceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecC-
Q 010508 385 EAMLMDWMRNFEVGIPTLLEDGIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGP- 463 (508)
Q Consensus 385 ~~~~~D~~~~~~~~i~~LL~~girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~- 463 (508)
+..|.+..+.. +..++++++|||||+||.|++||+.|+++|+++|+|+++. +|+||+++++++||+|+|++
T Consensus 329 --~~~d~~~~~~~-~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~-----~~~~w~~~~~~~G~vk~y~n~ 400 (433)
T PLN03016 329 --YNHDIVSSIPY-HMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIH-----NWRPWMINNQIAGYTRAYSNK 400 (433)
T ss_pred --cccccchhhHH-HHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCC-----CcccccCCCEeeeEEEEeCCc
Confidence 44565543333 3344557899999999999999999999999999999864 47899999999999999975
Q ss_pred eEEEEEcCCCccCCccChHHHHHHHHHHHcCCc
Q 010508 464 LTFLKVHDAGHMVPMDQPKASLQMLQSWMQGKL 496 (508)
Q Consensus 464 Ltf~~V~~AGHmvP~DqP~~a~~ml~~fl~g~~ 496 (508)
|||++|++|||||| +||++|++|+++||+|++
T Consensus 401 ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~ 432 (433)
T PLN03016 401 MTFATIKAGGHTAE-YRPNETFIMFQRWISGQP 432 (433)
T ss_pred eEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCC
Confidence 99999999999998 799999999999999975
No 5
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=7.6e-97 Score=779.63 Aligned_cols=390 Identities=30% Similarity=0.584 Sum_probs=325.8
Q ss_pred ecCCCCCCCCCCCccceeeEeEEcCCCCCccEEEEEEeccCCC-CCCEEEEECCCCCchhhhhhhhcCCCeEEeCC----
Q 010508 83 SLNPLGDPGPSVQEFGHHAGYYTLPHSQSARMFYFFFESRNNK-SDPVVIWLTGGPGCSSELALFYENGPFHIANN---- 157 (508)
Q Consensus 83 ~~p~~~~~~~~~~~~~~~sGy~~v~~~~~~~lFy~ffes~~~~-~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~---- 157 (508)
+|||++... .+++||||++|.++.+++||||||||++++ ++||||||||||||||+.|+|.|+|||+++.+
T Consensus 27 ~lpg~~~~~----~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~ 102 (437)
T PLN02209 27 FLPGFKGPL----PFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNG 102 (437)
T ss_pred cCCCCCCCC----CeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCC
Confidence 599997655 479999999998777789999999999888 89999999999999999999999999999864
Q ss_pred --CcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccch
Q 010508 158 --LSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYI 235 (508)
Q Consensus 158 --~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yv 235 (508)
.++++|+|||++.|||||||||+||||||+++...... +++.|+|+++||+.||++||+|+++||||+|||||||||
T Consensus 103 ~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~-~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yv 181 (437)
T PLN02209 103 SVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTS-DTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIV 181 (437)
T ss_pred CcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccC-CHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceeh
Confidence 37999999999999999999999999999876655544 445679999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccccceEeeeeeeccCCCCChhhhhhhHHHHHhhhcccchhhHHHHHHhhhhhHHHHHhhcCCCCCcc
Q 010508 236 PAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAIQYKEYTEYALNMRLIKQSDYESINKLIPTCEHAIKTCESDGGDAC 315 (508)
Q Consensus 236 P~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~i~~~~~~c~~~i~~c~~~~~~~c 315 (508)
|.+|++|+++|+.....+||||||+||||++||..|..++.+|++.+|+|++++++++++. |..... .|
T Consensus 182 P~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~---c~~~~~--------~~ 250 (437)
T PLN02209 182 PALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRI---CKGNYF--------SV 250 (437)
T ss_pred HHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHh---cccccc--------cC
Confidence 9999999998875556789999999999999999999999999999999999999999874 422100 01
Q ss_pred cchHHHHHHHHHHHHhhcCCCccccc-ccccCC-------CCCCC--chHHHHHhChHHHHHHhCCCc---ccccccchh
Q 010508 316 SSSYAVCNSIFNKILGIAGDVNYYDI-RKKCEG-------DLCYD--FSNMERFLNEKSVREALGVGD---IDFVSCSST 382 (508)
Q Consensus 316 ~~a~~~c~~i~~~i~~~~g~~N~Ydi-r~~c~~-------~~c~~--~~~~~~yLN~~~Vr~AL~v~~---~~~~~cs~~ 382 (508)
......|.+.+.......+.+|.|++ ...|.. ..|.+ ...++.|||+++||+||||+. ..|..|+..
T Consensus 251 ~~~~~~C~~~i~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~~~~~ 330 (437)
T PLN02209 251 DPSNKKCLKLVEEYHKCTDNINSHHTLIANCDDSNTQHISPDCYYYPYHLVECWANNESVREALHVDKGSIGEWIRDHRG 330 (437)
T ss_pred CCChHHHHHHHHHHHHHhhcCCccccccccccccccccCCCCcccccHHHHHHHhCCHHHHHHhCCCCCCCCCCccccch
Confidence 11233455555444444455565542 233432 23533 346899999999999999983 369999875
Q ss_pred hHhhhhcccccccccchhhhhcCCceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEec
Q 010508 383 VYEAMLMDWMRNFEVGIPTLLEDGIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHG 462 (508)
Q Consensus 383 V~~~~~~D~~~~~~~~i~~LL~~girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~ 462 (508)
+ .+..|++.++...+ .+|++|+|||||+||.|++|||.|+++|+++|+|++++ +|+||+++|+++||+|+|+
T Consensus 331 ~--~~~~d~~~~~~~~~-~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~-----~~~~w~~~~q~aG~vk~y~ 402 (437)
T PLN02209 331 I--PYKSDIRSSIPYHM-NNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIID-----DWRPWMIKGQIAGYTRTYS 402 (437)
T ss_pred h--hcccchhhhHHHHH-HHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCC-----CeeeeEECCEeeeEEEEeC
Confidence 5 34556665544444 34457899999999999999999999999999999865 4689999999999999999
Q ss_pred C-eEEEEEcCCCccCCccChHHHHHHHHHHHcCCcC
Q 010508 463 P-LTFLKVHDAGHMVPMDQPKASLQMLQSWMQGKLA 497 (508)
Q Consensus 463 ~-Ltf~~V~~AGHmvP~DqP~~a~~ml~~fl~g~~~ 497 (508)
| |||++|++|||||| +||++|++||++||.|+++
T Consensus 403 n~Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 403 NKMTFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred CceEEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 6 99999999999998 7999999999999998753
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=1.3e-73 Score=584.18 Aligned_cols=306 Identities=27% Similarity=0.517 Sum_probs=260.5
Q ss_pred CceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhccccc
Q 010508 170 ASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEK 249 (508)
Q Consensus 170 ~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~ 249 (508)
.|||||||||+||||||+++..++.+ ++++|+|++.||++||++||+|+++||||+||||||||||++|++|+++|+..
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~~~-d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDKTG-DISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCccc-cHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 48999999999999999877655544 44456999999999999999999999999999999999999999999988766
Q ss_pred ccceEeeeeeeccCCCCChhhhhhhHHHHHhhhcccchhhHHHHHHhhhhhHHHHHhhcCCCCCcccchHHHHHHHHHHH
Q 010508 250 QGIHINLKGFAIGNGLTDPAIQYKEYTEYALNMRLIKQSDYESINKLIPTCEHAIKTCESDGGDACSSSYAVCNSIFNKI 329 (508)
Q Consensus 250 ~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~i~~~~~~c~~~i~~c~~~~~~~c~~a~~~c~~i~~~i 329 (508)
++.+||||||+||||+|+|..|..++.+|++.+|+|++++++.+++. |.... ..|..+...|.+++..+
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~---c~~~~--------~~~~~~~~~c~~~~~~~ 148 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRI---CNGNY--------YNVDPSNTQCLKLTEEY 148 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHh---cCCCc--------cCCCCCcHHHHHHHHHH
Confidence 66789999999999999999999999999999999999999999874 42211 12334556788888777
Q ss_pred HhhcCCCcccccccc-cCC-----CCCCC--chHHHHHhChHHHHHHhCCC---cccccccchhhHhhhhcccccccccc
Q 010508 330 LGIAGDVNYYDIRKK-CEG-----DLCYD--FSNMERFLNEKSVREALGVG---DIDFVSCSSTVYEAMLMDWMRNFEVG 398 (508)
Q Consensus 330 ~~~~g~~N~Ydir~~-c~~-----~~c~~--~~~~~~yLN~~~Vr~AL~v~---~~~~~~cs~~V~~~~~~D~~~~~~~~ 398 (508)
....+.+|.||++.. |.. +.|++ ...+.+|||+++||+||||+ ...|..|+..|. +..|++.+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~--~~~d~~~~~~~~ 226 (319)
T PLN02213 149 HKCTAKINIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIP--YNHDIVSSIPYH 226 (319)
T ss_pred HHHHhcCCHhhcccCcccCccCCCCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCcccc--cccccccchHHH
Confidence 777889999999844 643 35764 34689999999999999997 368999999986 445665433333
Q ss_pred hhhhhcCCceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecC-eEEEEEcCCCccCC
Q 010508 399 IPTLLEDGIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGP-LTFLKVHDAGHMVP 477 (508)
Q Consensus 399 i~~LL~~girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~-Ltf~~V~~AGHmvP 477 (508)
+ .+|..|+|||||+||.|++|||.|+++|+++|+|++++ +|+||+++++++||+|+|++ |||++|++||||||
T Consensus 227 ~-~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~-----~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~ 300 (319)
T PLN02213 227 M-NNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIH-----NWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE 300 (319)
T ss_pred H-HHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCC-----CCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC
Confidence 3 34456899999999999999999999999999999864 47899999999999999986 99999999999998
Q ss_pred ccChHHHHHHHHHHHcCCc
Q 010508 478 MDQPKASLQMLQSWMQGKL 496 (508)
Q Consensus 478 ~DqP~~a~~ml~~fl~g~~ 496 (508)
+||++|++||++||+|++
T Consensus 301 -~qP~~al~m~~~fi~~~~ 318 (319)
T PLN02213 301 -YRPNETFIMFQRWISGQP 318 (319)
T ss_pred -cCHHHHHHHHHHHHcCCC
Confidence 799999999999999975
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-71 Score=574.53 Aligned_cols=393 Identities=35% Similarity=0.623 Sum_probs=332.2
Q ss_pred cceeeEeEEcCCCCCccEEEEEEeccCCC-CCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccc--cCCCCCCCceE
Q 010508 97 FGHHAGYYTLPHSQSARMFYFFFESRNNK-SDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVW--NDYGWDKASNL 173 (508)
Q Consensus 97 ~~~~sGy~~v~~~~~~~lFy~ffes~~~~-~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~--N~~sW~k~anv 173 (508)
+++|+||... +. .+|||+||+++++ ++|+|+||||||||||+.|+|.|+||++|+.+.+... ||+||+.++||
T Consensus 74 v~~~~g~~d~---ed-~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adL 149 (498)
T COG2939 74 VRDYTGYPDA---ED-FFFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADL 149 (498)
T ss_pred hhhccCCccc---ce-eEEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCce
Confidence 6789999443 22 3999999999988 9999999999999999999999999999998755554 99999999999
Q ss_pred EEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCC--CEEEEcccccccchHHHHHHHHhccccccc
Q 010508 174 LFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKN--DFYITGESYAGHYIPAFASRVHKGNKEKQG 251 (508)
Q Consensus 174 LyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~--~~yI~GESYgG~yvP~lA~~i~~~n~~~~~ 251 (508)
||||||+||||||+. ..+...+-+.+.+|++.|++.||+.||++.+. ++||+||||||+|+|.||+.|+++|.. .+
T Consensus 150 vFiDqPvGTGfS~a~-~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~-~~ 227 (498)
T COG2939 150 VFIDQPVGTGFSRAL-GDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA-LN 227 (498)
T ss_pred EEEecCcccCccccc-ccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc-cC
Confidence 999999999999982 33455677889999999999999999999988 999999999999999999999998743 23
Q ss_pred ceEeeeeeeccCC-CCChhhhhhhHHHHHhhhcc----cchhhHHHHHH--hhhhhHHHHHhhc-CCCCCcccchHHHHH
Q 010508 252 IHINLKGFAIGNG-LTDPAIQYKEYTEYALNMRL----IKQSDYESINK--LIPTCEHAIKTCE-SDGGDACSSSYAVCN 323 (508)
Q Consensus 252 ~~inLkGi~IGNg-~~dp~~q~~~~~~~a~~~gl----I~~~~~~~i~~--~~~~c~~~i~~c~-~~~~~~c~~a~~~c~ 323 (508)
-.+||++++|||| +|+|..|+..|..+|...+. ...+.++++++ ....|...++.|. ......|..+...|.
T Consensus 228 ~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~~~ 307 (498)
T COG2939 228 GNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAYLT 307 (498)
T ss_pred CceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHHHH
Confidence 4699999999999 99999999999999986654 44556666665 3334555566663 233455666666666
Q ss_pred HHHHHHHhhcC--CCcccccccccCCCC----CCC-chHHHHHhChHHHHHHhCCCcccccccchhhHhhhh---ccccc
Q 010508 324 SIFNKILGIAG--DVNYYDIRKKCEGDL----CYD-FSNMERFLNEKSVREALGVGDIDFVSCSSTVYEAML---MDWMR 393 (508)
Q Consensus 324 ~i~~~i~~~~g--~~N~Ydir~~c~~~~----c~~-~~~~~~yLN~~~Vr~AL~v~~~~~~~cs~~V~~~~~---~D~~~ 393 (508)
..........| -.|.||+|..|.... ||+ ......|++...++++++.....|..|+..+..++. .+|+.
T Consensus 308 ~~~~~~~~r~~~~~~n~y~~r~~~~d~g~~~~~y~~~~~~ld~~~~~~~~~~~~~~~d~~~~c~t~a~~~f~~~~~~~~~ 387 (498)
T COG2939 308 GLMREYVGRAGGRLLNVYDIREECRDPGLGGSCYDTLSTSLDYFNFDPEQEVNDPEVDNISGCTTDAMTDFLTFTGGWAK 387 (498)
T ss_pred hcchhhhccccccccccccchhhcCCCCcccccccceeeccccccccchhccccccccchhccchHHHHhhhhhcCCccc
Confidence 55443333333 489999999998643 665 456688999888899888776789999999988874 78998
Q ss_pred ccccchhhhhcCCceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeee--CCeeeeEEEEecCeEEEEEcC
Q 010508 394 NFEVGIPTLLEDGIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKV--DGAETGQIKSHGPLTFLKVHD 471 (508)
Q Consensus 394 ~~~~~i~~LL~~girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v--~g~~aG~~k~~~~Ltf~~V~~ 471 (508)
.....+..++..++.+++|.|+.|.+||+.|++.|..+|+|.+..+|..+...+|.. .++..|-.++++|++|+.++.
T Consensus 388 ~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~ 467 (498)
T COG2939 388 PSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYE 467 (498)
T ss_pred ccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEec
Confidence 888889999999999999999999999999999999999999999999999888865 678889999999999999999
Q ss_pred CCccCCccChHHHHHHHHHHHcCC
Q 010508 472 AGHMVPMDQPKASLQMLQSWMQGK 495 (508)
Q Consensus 472 AGHmvP~DqP~~a~~ml~~fl~g~ 495 (508)
||||||.|+|+.+++|++.|+.+.
T Consensus 468 aGHMvp~d~P~~~~~~~~~~~~~~ 491 (498)
T COG2939 468 AGHMVPYDRPESSLEMVNLWINGY 491 (498)
T ss_pred CcceeecCChHHHHHHHHHHHhhc
Confidence 999999999999999999999873
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.2e-66 Score=503.36 Aligned_cols=379 Identities=29% Similarity=0.535 Sum_probs=328.8
Q ss_pred eEeEEcCCCCCccEEEEEEeccCCC--CCCEEEEECCCCCchhh-hhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEe
Q 010508 101 AGYYTLPHSQSARMFYFFFESRNNK--SDPVVIWLTGGPGCSSE-LALFYENGPFHIANNLSLVWNDYGWDKASNLLFVD 177 (508)
Q Consensus 101 sGy~~v~~~~~~~lFy~ffes~~~~--~dPlvlWlnGGPGcSS~-~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiD 177 (508)
-||++| +.++|||||++.+..+- ..|+.|||+||||.||. .|+|.|.||...+ +.+|+.+|-|.|+|||||
T Consensus 5 wg~v~v--r~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~----~~~r~~TWlk~adllfvD 78 (414)
T KOG1283|consen 5 WGYVDV--RTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD----GSPRDWTWLKDADLLFVD 78 (414)
T ss_pred ccceee--ecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC----CCcCCchhhhhccEEEec
Confidence 588888 45689999999987653 89999999999999884 8999999999765 788999999999999999
Q ss_pred CCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeee
Q 010508 178 QPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLK 257 (508)
Q Consensus 178 qPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLk 257 (508)
.|||+||||.+..+.+.++.+++|.|+.+.|+.||..||||+..||||+-|||||+..+.+|..+.+..+.++ ++.|+.
T Consensus 79 nPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~-i~~nf~ 157 (414)
T KOG1283|consen 79 NPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGE-IKLNFI 157 (414)
T ss_pred CCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCc-eeecce
Confidence 9999999999988889999999999999999999999999999999999999999999999999998876543 789999
Q ss_pred eeeccCCCCChhhhhhhHHHHHhhhcccchhhHHHHHHhhhhhHHHHHhhcCCCCCcccchHHHHHHHHHHHHhhcCCCc
Q 010508 258 GFAIGNGLTDPAIQYKEYTEYALNMRLIKQSDYESINKLIPTCEHAIKTCESDGGDACSSSYAVCNSIFNKILGIAGDVN 337 (508)
Q Consensus 258 Gi~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~i~~~~~~c~~~i~~c~~~~~~~c~~a~~~c~~i~~~i~~~~g~~N 337 (508)
|+++|+.||+|..-.-+..+|+++++++|+...++.++...+|+..+..-...+...|- ...-+.+...+.+++
T Consensus 158 ~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~W------g~~e~li~~~sn~Vd 231 (414)
T KOG1283|consen 158 GVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGW------GGGENLISRESNGVD 231 (414)
T ss_pred eEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccc------cCcCcceeecccCcc
Confidence 99999999999999999999999999999999999998877777665433222211111 111123334556789
Q ss_pred ccccccccCCC------------------CC------CCchHHHHHhChHHHHHHhCCC--cccccccchhhHhhhhccc
Q 010508 338 YYDIRKKCEGD------------------LC------YDFSNMERFLNEKSVREALGVG--DIDFVSCSSTVYEAMLMDW 391 (508)
Q Consensus 338 ~Ydir~~c~~~------------------~c------~~~~~~~~yLN~~~Vr~AL~v~--~~~~~~cs~~V~~~~~~D~ 391 (508)
.|||..+...+ .| .+...++++||- -||++|++. ...|-..+..|+.++..|+
T Consensus 232 fYNil~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g-~vrkkLgIip~~~~wGgqsg~vFt~lq~dF 310 (414)
T KOG1283|consen 232 FYNILTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNG-PVRKKLGIIPGGVKWGGQSGDVFTKLQGDF 310 (414)
T ss_pred eeeeeccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhcc-cccccccccCCCCcccCcCCchHHHhhhhh
Confidence 99987654321 11 112347788884 589999996 5789999999999999999
Q ss_pred ccccccchhhhhcCCceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcC
Q 010508 392 MRNFEVGIPTLLEDGIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHD 471 (508)
Q Consensus 392 ~~~~~~~i~~LL~~girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~ 471 (508)
|+++...+.+||+.|++|.||+|++|.||++.|+++|++.|+|++...|+..+|.-++++-..+||.|+|+||.|.+|..
T Consensus 311 MKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f~wilr 390 (414)
T KOG1283|consen 311 MKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSFFWILR 390 (414)
T ss_pred cccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccceeEEeec
Confidence 99999999999999999999999999999999999999999999999999999999988778899999999999999999
Q ss_pred CCccCCccChHHHHHHHHHHHc
Q 010508 472 AGHMVPMDQPKASLQMLQSWMQ 493 (508)
Q Consensus 472 AGHmvP~DqP~~a~~ml~~fl~ 493 (508)
||||||.|+|+.|.+|++.+.+
T Consensus 391 aghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 391 AGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred ccCcccCCCHHHHhhheeeccc
Confidence 9999999999999999987654
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.46 E-value=3.5e-12 Score=123.50 Aligned_cols=116 Identities=21% Similarity=0.238 Sum_probs=76.2
Q ss_pred EEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCC
Q 010508 115 FYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIR 194 (508)
Q Consensus 115 Fy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~ 194 (508)
+|..+..+ .++.|+||+++|.+|.+.....+.+ -+.+..+++.+|.| |.|.|-......
T Consensus 2 ~~~~~~~~-~~~~~~iv~lhG~~~~~~~~~~~~~-----------------~l~~~~~vi~~D~~-G~G~S~~~~~~~-- 60 (257)
T TIGR03611 2 HYELHGPP-DADAPVVVLSSGLGGSGSYWAPQLD-----------------VLTQRFHVVTYDHR-GTGRSPGELPPG-- 60 (257)
T ss_pred EEEEecCC-CCCCCEEEEEcCCCcchhHHHHHHH-----------------HHHhccEEEEEcCC-CCCCCCCCCccc--
Confidence 45554332 2378999999999877655433322 12245799999998 999986433222
Q ss_pred CChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCCh
Q 010508 195 HDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDP 268 (508)
Q Consensus 195 ~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp 268 (508)
.+.++.++++.+++.. +...+++|+|+|+||..+..+|.+..+ .++++++.+++..+
T Consensus 61 ~~~~~~~~~~~~~i~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~~~----------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 61 YSIAHMADDVLQLLDA-------LNIERFHFVGHALGGLIGLQLALRYPE----------RLLSLVLINAWSRP 117 (257)
T ss_pred CCHHHHHHHHHHHHHH-------hCCCcEEEEEechhHHHHHHHHHHChH----------HhHHheeecCCCCC
Confidence 3445556666665542 234579999999999888888765322 37888877776543
No 10
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.40 E-value=2.8e-11 Score=118.52 Aligned_cols=104 Identities=16% Similarity=0.245 Sum_probs=72.9
Q ss_pred ccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhh
Q 010508 121 SRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGV 200 (508)
Q Consensus 121 s~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~ 200 (508)
-.++++.|.||+++|.+|.+.....+.+ .+.+..+++.+|+| |.|.|.... . .+.++.
T Consensus 10 ~~~~~~~~~iv~lhG~~~~~~~~~~~~~-----------------~l~~~~~vi~~D~~-G~G~s~~~~--~--~~~~~~ 67 (255)
T PRK10673 10 AQNPHNNSPIVLVHGLFGSLDNLGVLAR-----------------DLVNDHDIIQVDMR-NHGLSPRDP--V--MNYPAM 67 (255)
T ss_pred CCCCCCCCCEEEECCCCCchhHHHHHHH-----------------HHhhCCeEEEECCC-CCCCCCCCC--C--CCHHHH
Confidence 3334488999999999888765544433 23345799999998 999886422 2 345567
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccC
Q 010508 201 SNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGN 263 (508)
Q Consensus 201 a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGN 263 (508)
++|+.++|..+ ...+++|.|+|+||..+..+|.+..+ .++++++.+
T Consensus 68 ~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~----------~v~~lvli~ 113 (255)
T PRK10673 68 AQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPD----------RIDKLVAID 113 (255)
T ss_pred HHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHh----------hcceEEEEe
Confidence 78888877643 34579999999999888877765322 367777654
No 11
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.38 E-value=2.8e-11 Score=118.81 Aligned_cols=129 Identities=24% Similarity=0.358 Sum_probs=78.7
Q ss_pred eeEeEEcCCCCCccEEEEEEeccCCCCCCEEEEECCCCCchhh-hhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeC
Q 010508 100 HAGYYTLPHSQSARMFYFFFESRNNKSDPVVIWLTGGPGCSSE-LALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQ 178 (508)
Q Consensus 100 ~sGy~~v~~~~~~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~-~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDq 178 (508)
..++++++. ..+.|.-+.. ....|.||+++||||+++. ...+.+ .+.. +-.+|+.+|.
T Consensus 3 ~~~~~~~~~---~~~~~~~~~~--~~~~~~vl~~hG~~g~~~~~~~~~~~----------~l~~------~g~~vi~~d~ 61 (288)
T TIGR01250 3 IEGIITVDG---GYHLFTKTGG--EGEKIKLLLLHGGPGMSHEYLENLRE----------LLKE------EGREVIMYDQ 61 (288)
T ss_pred ccceecCCC---CeEEEEeccC--CCCCCeEEEEcCCCCccHHHHHHHHH----------HHHh------cCCEEEEEcC
Confidence 355666532 3444444321 1246889999999999764 233222 1111 1378999999
Q ss_pred CCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeee
Q 010508 179 PTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKG 258 (508)
Q Consensus 179 PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkG 258 (508)
| |.|.|..........+.+..++++.+++.. +..++++|+|+|+||..+..+|.+. +..+++
T Consensus 62 ~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~----------p~~v~~ 123 (288)
T TIGR01250 62 L-GCGYSDQPDDSDELWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKY----------GQHLKG 123 (288)
T ss_pred C-CCCCCCCCCcccccccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhC----------ccccce
Confidence 8 999986432221113445566666554442 3345699999999998888777643 234788
Q ss_pred eeccCCCCC
Q 010508 259 FAIGNGLTD 267 (508)
Q Consensus 259 i~IGNg~~d 267 (508)
+++.++...
T Consensus 124 lvl~~~~~~ 132 (288)
T TIGR01250 124 LIISSMLDS 132 (288)
T ss_pred eeEeccccc
Confidence 888776543
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.34 E-value=6.9e-11 Score=116.63 Aligned_cols=107 Identities=17% Similarity=0.167 Sum_probs=70.7
Q ss_pred CCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHH
Q 010508 125 KSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDL 204 (508)
Q Consensus 125 ~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~ 204 (508)
++.|+||+++|.+|.+.....+.+ .| .+..+++.+|.| |.|.|...... ..+.+..++|+
T Consensus 26 ~~~~~vv~~hG~~~~~~~~~~~~~----------~l-------~~~~~vi~~D~~-G~G~S~~~~~~--~~~~~~~~~~l 85 (278)
T TIGR03056 26 TAGPLLLLLHGTGASTHSWRDLMP----------PL-------ARSFRVVAPDLP-GHGFTRAPFRF--RFTLPSMAEDL 85 (278)
T ss_pred CCCCeEEEEcCCCCCHHHHHHHHH----------HH-------hhCcEEEeecCC-CCCCCCCcccc--CCCHHHHHHHH
Confidence 356999999999877665443333 12 234789999997 99988643321 23445566666
Q ss_pred HHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCCh
Q 010508 205 YDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDP 268 (508)
Q Consensus 205 ~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp 268 (508)
.+++++ +..++++|+|+|+||..+..+|.+. +..++++++.++...+
T Consensus 86 ~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 86 SALCAA-------EGLSPDGVIGHSAGAAIALRLALDG----------PVTPRMVVGINAALMP 132 (278)
T ss_pred HHHHHH-------cCCCCceEEEECccHHHHHHHHHhC----------CcccceEEEEcCcccc
Confidence 665542 2345789999999997666665432 2347788887776553
No 13
>PHA02857 monoglyceride lipase; Provisional
Probab=99.32 E-value=8.1e-11 Score=117.24 Aligned_cols=124 Identities=12% Similarity=0.113 Sum_probs=81.5
Q ss_pred CCccEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCC-CceEEEEeCCCCCCccccc
Q 010508 110 QSARMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDK-ASNLLFVDQPTGTGFSYTS 188 (508)
Q Consensus 110 ~~~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k-~anvLyiDqPvGtGfSy~~ 188 (508)
.+.+|+|.+++.. +..+|+||.++|.+++|...-.+.+ .+.+ -.+++-+|.| |.|.|-..
T Consensus 9 ~g~~l~~~~~~~~-~~~~~~v~llHG~~~~~~~~~~~~~-----------------~l~~~g~~via~D~~-G~G~S~~~ 69 (276)
T PHA02857 9 DNDYIYCKYWKPI-TYPKALVFISHGAGEHSGRYEELAE-----------------NISSLGILVFSHDHI-GHGRSNGE 69 (276)
T ss_pred CCCEEEEEeccCC-CCCCEEEEEeCCCccccchHHHHHH-----------------HHHhCCCEEEEccCC-CCCCCCCc
Confidence 4568999888775 3356999999999777665443333 2333 3689999997 99998542
Q ss_pred CCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCC
Q 010508 189 DKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTD 267 (508)
Q Consensus 189 ~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~d 267 (508)
.. ...+-....+|+.+++..+-+. +...+++|+|+|+||..+..+|.+- +-+++|+++.+|.++
T Consensus 70 ~~--~~~~~~~~~~d~~~~l~~~~~~---~~~~~~~lvG~S~GG~ia~~~a~~~----------p~~i~~lil~~p~~~ 133 (276)
T PHA02857 70 KM--MIDDFGVYVRDVVQHVVTIKST---YPGVPVFLLGHSMGATISILAAYKN----------PNLFTAMILMSPLVN 133 (276)
T ss_pred cC--CcCCHHHHHHHHHHHHHHHHhh---CCCCCEEEEEcCchHHHHHHHHHhC----------ccccceEEEeccccc
Confidence 21 1112233456666666544333 3456899999999997666555432 225899999888765
No 14
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.31 E-value=4.3e-11 Score=112.48 Aligned_cols=104 Identities=22% Similarity=0.281 Sum_probs=69.6
Q ss_pred EEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHH
Q 010508 130 VIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQ 209 (508)
Q Consensus 130 vlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~ 209 (508)
||.++|++|.+.....+.+ .| .+-.+|+.+|.| |.|.|-.... ....+.++.++|+.++|
T Consensus 1 vv~~hG~~~~~~~~~~~~~----------~l-------~~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~l~~~l- 60 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAE----------AL-------ARGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAEDLAELL- 60 (228)
T ss_dssp EEEE-STTTTGGGGHHHHH----------HH-------HTTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHHHHHHH-
T ss_pred eEEECCCCCCHHHHHHHHH----------HH-------hCCCEEEEEecC-Cccccccccc-cCCcchhhhhhhhhhcc-
Confidence 7899999988865554444 22 245689999998 9999875432 11233344555555544
Q ss_pred HHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChh
Q 010508 210 AFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPA 269 (508)
Q Consensus 210 ~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 269 (508)
++. ..++++|+|+|+||..+..++.+..+ .++|+++-++.....
T Consensus 61 ---~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~----------~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 61 ---DAL---GIKKVILVGHSMGGMIALRLAARYPD----------RVKGLVLLSPPPPLP 104 (228)
T ss_dssp ---HHT---TTSSEEEEEETHHHHHHHHHHHHSGG----------GEEEEEEESESSSHH
T ss_pred ---ccc---cccccccccccccccccccccccccc----------ccccceeeccccccc
Confidence 432 23689999999999888777766432 589999877776543
No 15
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.30 E-value=1.6e-10 Score=116.47 Aligned_cols=105 Identities=16% Similarity=0.117 Sum_probs=73.1
Q ss_pred CCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCC----CCCChhhhHH
Q 010508 127 DPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDD----IRHDEEGVSN 202 (508)
Q Consensus 127 dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~----~~~~~~~~a~ 202 (508)
.|.||+|+|.++.+.+...+.+ .+.+.++++.+|.| |.|.|-..+... ...+.++.++
T Consensus 29 ~~~vlllHG~~~~~~~w~~~~~-----------------~L~~~~~vi~~Dlp-G~G~S~~~~~~~~~~~~~~~~~~~a~ 90 (294)
T PLN02824 29 GPALVLVHGFGGNADHWRKNTP-----------------VLAKSHRVYAIDLL-GYGYSDKPNPRSAPPNSFYTFETWGE 90 (294)
T ss_pred CCeEEEECCCCCChhHHHHHHH-----------------HHHhCCeEEEEcCC-CCCCCCCCccccccccccCCHHHHHH
Confidence 4789999999988887655544 23455699999998 999997543221 1234455666
Q ss_pred HHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCC
Q 010508 203 DLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLT 266 (508)
Q Consensus 203 d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~ 266 (508)
|+.++|.+. ...+++|+|+|.||..+-.+|.+.. -.++++++-|+..
T Consensus 91 ~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p----------~~v~~lili~~~~ 137 (294)
T PLN02824 91 QLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAP----------ELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhCh----------hheeEEEEECCCc
Confidence 666666533 3468999999999977766665532 2478888877653
No 16
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.26 E-value=3.2e-10 Score=114.37 Aligned_cols=58 Identities=12% Similarity=0.113 Sum_probs=47.9
Q ss_pred CceEEEEeecCcccCchhhH-HHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGN-SKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKAS 484 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~-~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a 484 (508)
.++|||..|+.|.+++.... +++.+.+ .+.++.+|++|||++++++|++.
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~i-----------------------------p~~~~~~i~~aGH~~~~e~Pe~~ 277 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATF-----------------------------PDHVLVELPNAKHFIQEDAPDRI 277 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhc-----------------------------CCCeEEEcCCCcccccccCHHHH
Confidence 69999999999998866554 3333333 35677899999999999999999
Q ss_pred HHHHHHHH
Q 010508 485 LQMLQSWM 492 (508)
Q Consensus 485 ~~ml~~fl 492 (508)
.++|.+|+
T Consensus 278 ~~~i~~~~ 285 (286)
T PRK03204 278 AAAIIERF 285 (286)
T ss_pred HHHHHHhc
Confidence 99999997
No 17
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.24 E-value=6e-10 Score=115.49 Aligned_cols=127 Identities=13% Similarity=0.169 Sum_probs=81.4
Q ss_pred CCCccEEEEEEeccCCCCCCEEEEECCCCCchhh-hhhhhcCCCeEEeCCCcccccCCCCCC-CceEEEEeCCCCCCccc
Q 010508 109 SQSARMFYFFFESRNNKSDPVVIWLTGGPGCSSE-LALFYENGPFHIANNLSLVWNDYGWDK-ASNLLFVDQPTGTGFSY 186 (508)
Q Consensus 109 ~~~~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~-~glf~E~GP~~i~~~~~l~~N~~sW~k-~anvLyiDqPvGtGfSy 186 (508)
+.+..+||..+...+.+..|+||.++|..+.++. ...+.+ .+.+ -.+|+-+|.| |.|.|-
T Consensus 69 ~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~-----------------~l~~~g~~v~~~D~~-G~G~S~ 130 (349)
T PLN02385 69 SRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIAR-----------------KIASSGYGVFAMDYP-GFGLSE 130 (349)
T ss_pred CCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHH-----------------HHHhCCCEEEEecCC-CCCCCC
Confidence 3456888877765444467999999998655442 121211 2222 3699999998 999986
Q ss_pred ccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCC
Q 010508 187 TSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLT 266 (508)
Q Consensus 187 ~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~ 266 (508)
... ....+.+..++|+.++++. +...+++...+++|+|+|+||..+..+|.+- +-.++|+++.+|..
T Consensus 131 ~~~--~~~~~~~~~~~dv~~~l~~-l~~~~~~~~~~~~LvGhSmGG~val~~a~~~----------p~~v~glVLi~p~~ 197 (349)
T PLN02385 131 GLH--GYIPSFDDLVDDVIEHYSK-IKGNPEFRGLPSFLFGQSMGGAVALKVHLKQ----------PNAWDGAILVAPMC 197 (349)
T ss_pred CCC--CCcCCHHHHHHHHHHHHHH-HHhccccCCCCEEEEEeccchHHHHHHHHhC----------cchhhheeEecccc
Confidence 421 2223445667787776654 3334455566899999999996665554432 12478888877654
No 18
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.22 E-value=8.7e-10 Score=111.65 Aligned_cols=126 Identities=15% Similarity=0.151 Sum_probs=77.3
Q ss_pred eEeEEcCCCCC--ccEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeC
Q 010508 101 AGYYTLPHSQS--ARMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQ 178 (508)
Q Consensus 101 sGy~~v~~~~~--~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDq 178 (508)
=.|++|+...+ .+++|.-. .+++.|.||.++|.|+.+.....+.+ .|.. +..+|+.+|.
T Consensus 21 ~~~~~~~~~~~~~~~i~y~~~---G~~~~~~lvliHG~~~~~~~w~~~~~----------~L~~------~gy~vi~~Dl 81 (302)
T PRK00870 21 PHYVDVDDGDGGPLRMHYVDE---GPADGPPVLLLHGEPSWSYLYRKMIP----------ILAA------AGHRVIAPDL 81 (302)
T ss_pred ceeEeecCCCCceEEEEEEec---CCCCCCEEEEECCCCCchhhHHHHHH----------HHHh------CCCEEEEECC
Confidence 45677765333 35665532 23456889999999877765433322 1211 2369999999
Q ss_pred CCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeee
Q 010508 179 PTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKG 258 (508)
Q Consensus 179 PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkG 258 (508)
| |.|.|-.... ....+.++.++|+.++|+ + +...++.|.|+|+||..+-.+|.+.. -.+++
T Consensus 82 ~-G~G~S~~~~~-~~~~~~~~~a~~l~~~l~----~---l~~~~v~lvGhS~Gg~ia~~~a~~~p----------~~v~~ 142 (302)
T PRK00870 82 I-GFGRSDKPTR-REDYTYARHVEWMRSWFE----Q---LDLTDVTLVCQDWGGLIGLRLAAEHP----------DRFAR 142 (302)
T ss_pred C-CCCCCCCCCC-cccCCHHHHHHHHHHHHH----H---cCCCCEEEEEEChHHHHHHHHHHhCh----------hheeE
Confidence 8 9999843211 112334445555555444 2 34568999999999987777776432 23777
Q ss_pred eeccCC
Q 010508 259 FAIGNG 264 (508)
Q Consensus 259 i~IGNg 264 (508)
+++-++
T Consensus 143 lvl~~~ 148 (302)
T PRK00870 143 LVVANT 148 (302)
T ss_pred EEEeCC
Confidence 877654
No 19
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.22 E-value=1.7e-09 Score=103.55 Aligned_cols=59 Identities=20% Similarity=0.245 Sum_probs=50.4
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
.++||+.+|+.|.++|....+.+.+.+. +.++.++.++||+++.++|+...
T Consensus 193 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~gH~~~~~~p~~~~ 243 (251)
T TIGR02427 193 AVPTLCIAGDQDGSTPPELVREIADLVP-----------------------------GARFAEIRGAGHIPCVEQPEAFN 243 (251)
T ss_pred CCCeEEEEeccCCcCChHHHHHHHHhCC-----------------------------CceEEEECCCCCcccccChHHHH
Confidence 6899999999999999887776665542 34568899999999999999999
Q ss_pred HHHHHHHc
Q 010508 486 QMLQSWMQ 493 (508)
Q Consensus 486 ~ml~~fl~ 493 (508)
+.++.|+.
T Consensus 244 ~~i~~fl~ 251 (251)
T TIGR02427 244 AALRDFLR 251 (251)
T ss_pred HHHHHHhC
Confidence 99999974
No 20
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.22 E-value=1e-09 Score=114.49 Aligned_cols=128 Identities=16% Similarity=0.110 Sum_probs=76.4
Q ss_pred eeEeEEcCCCCCccEEEEEEeccC-CCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeC
Q 010508 100 HAGYYTLPHSQSARMFYFFFESRN-NKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQ 178 (508)
Q Consensus 100 ~sGy~~v~~~~~~~lFy~ffes~~-~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDq 178 (508)
-..|+..... .+++|.-..+.. .++.|.||.|+|.++.+.....+.+ ...+...|+.+|.
T Consensus 62 ~~~~~~~~g~--~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~-----------------~L~~~~~via~Dl 122 (360)
T PLN02679 62 RCKKWKWKGE--YSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIG-----------------VLAKNYTVYAIDL 122 (360)
T ss_pred cCceEEECCc--eeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHH-----------------HHhcCCEEEEECC
Confidence 3445555321 256665433211 1245788999999887765443332 1223469999999
Q ss_pred CCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeee
Q 010508 179 PTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKG 258 (508)
Q Consensus 179 PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkG 258 (508)
| |.|.|-.... ...+.+..++++.++|.. +...+++|.|+|+||..+-.+|.+- . +-.++|
T Consensus 123 ~-G~G~S~~~~~--~~~~~~~~a~~l~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~--~-------P~rV~~ 183 (360)
T PLN02679 123 L-GFGASDKPPG--FSYTMETWAELILDFLEE-------VVQKPTVLIGNSVGSLACVIAASES--T-------RDLVRG 183 (360)
T ss_pred C-CCCCCCCCCC--ccccHHHHHHHHHHHHHH-------hcCCCeEEEEECHHHHHHHHHHHhc--C-------hhhcCE
Confidence 8 9999853221 223445567777766653 2345899999999995544444321 1 124788
Q ss_pred eeccCCC
Q 010508 259 FAIGNGL 265 (508)
Q Consensus 259 i~IGNg~ 265 (508)
+++.|+.
T Consensus 184 LVLi~~~ 190 (360)
T PLN02679 184 LVLLNCA 190 (360)
T ss_pred EEEECCc
Confidence 8876654
No 21
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.19 E-value=5.6e-10 Score=114.56 Aligned_cols=137 Identities=12% Similarity=0.106 Sum_probs=84.6
Q ss_pred ceeeEeEEcCCCCCccEEEEEEeccCC-CCCCEEEEECCCCCchhh-hhhhhcCCCeEEeCCCcccccCCCCCC-CceEE
Q 010508 98 GHHAGYYTLPHSQSARMFYFFFESRNN-KSDPVVIWLTGGPGCSSE-LALFYENGPFHIANNLSLVWNDYGWDK-ASNLL 174 (508)
Q Consensus 98 ~~~sGy~~v~~~~~~~lFy~ffes~~~-~~dPlvlWlnGGPGcSS~-~glf~E~GP~~i~~~~~l~~N~~sW~k-~anvL 174 (508)
....++++.. .+.+++|+.+..... +..|+||+++|..+.++. .-.+.+ .+.+ -.+|+
T Consensus 31 ~~~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~-----------------~L~~~Gy~V~ 91 (330)
T PLN02298 31 KGSKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAI-----------------FLAQMGFACF 91 (330)
T ss_pred ccccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHH-----------------HHHhCCCEEE
Confidence 3346666653 456788866543322 467999999998533321 000110 1233 37999
Q ss_pred EEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceE
Q 010508 175 FVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHI 254 (508)
Q Consensus 175 yiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~i 254 (508)
-+|+| |.|.|-.. .....+.+..++|+..+++..- ...++...+++|+|+|+||..+..++.+- +-
T Consensus 92 ~~D~r-GhG~S~~~--~~~~~~~~~~~~D~~~~i~~l~-~~~~~~~~~i~l~GhSmGG~ia~~~a~~~----------p~ 157 (330)
T PLN02298 92 ALDLE-GHGRSEGL--RAYVPNVDLVVEDCLSFFNSVK-QREEFQGLPRFLYGESMGGAICLLIHLAN----------PE 157 (330)
T ss_pred EecCC-CCCCCCCc--cccCCCHHHHHHHHHHHHHHHH-hcccCCCCCEEEEEecchhHHHHHHHhcC----------cc
Confidence 99998 99998532 1222345567888888776443 32234456899999999997665554321 12
Q ss_pred eeeeeeccCCCCC
Q 010508 255 NLKGFAIGNGLTD 267 (508)
Q Consensus 255 nLkGi~IGNg~~d 267 (508)
.++|+++.+++..
T Consensus 158 ~v~~lvl~~~~~~ 170 (330)
T PLN02298 158 GFDGAVLVAPMCK 170 (330)
T ss_pred cceeEEEeccccc
Confidence 4889998777653
No 22
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.13 E-value=9.3e-09 Score=102.26 Aligned_cols=59 Identities=14% Similarity=0.168 Sum_probs=51.2
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
.++||+..|+.|.+++...++++.+.+. +..++.|++|||+++.++|+...
T Consensus 223 ~~Pvlli~G~~D~~v~~~~~~~~~~~~~-----------------------------~~~~~~i~~agH~~~~e~p~~~~ 273 (282)
T TIGR03343 223 KAKTLVTWGRDDRFVPLDHGLKLLWNMP-----------------------------DAQLHVFSRCGHWAQWEHADAFN 273 (282)
T ss_pred CCCEEEEEccCCCcCCchhHHHHHHhCC-----------------------------CCEEEEeCCCCcCCcccCHHHHH
Confidence 6899999999999999877776665542 45668999999999999999999
Q ss_pred HHHHHHHc
Q 010508 486 QMLQSWMQ 493 (508)
Q Consensus 486 ~ml~~fl~ 493 (508)
++|.+|+.
T Consensus 274 ~~i~~fl~ 281 (282)
T TIGR03343 274 RLVIDFLR 281 (282)
T ss_pred HHHHHHhh
Confidence 99999985
No 23
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.13 E-value=1.5e-09 Score=106.79 Aligned_cols=59 Identities=14% Similarity=0.003 Sum_probs=49.9
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
.++|||++|+.|.++|....+...+.+ .+..++.+.++||+++.++|+...
T Consensus 196 ~~P~lii~G~~D~~~~~~~~~~~~~~i-----------------------------~~~~~~~i~~~gH~~~~e~p~~f~ 246 (256)
T PRK10349 196 SMPFLRLYGYLDGLVPRKVVPMLDKLW-----------------------------PHSESYIFAKAAHAPFISHPAEFC 246 (256)
T ss_pred CCCeEEEecCCCccCCHHHHHHHHHhC-----------------------------CCCeEEEeCCCCCCccccCHHHHH
Confidence 699999999999999987765544443 245669999999999999999999
Q ss_pred HHHHHHHc
Q 010508 486 QMLQSWMQ 493 (508)
Q Consensus 486 ~ml~~fl~ 493 (508)
+.+.+|-+
T Consensus 247 ~~l~~~~~ 254 (256)
T PRK10349 247 HLLVALKQ 254 (256)
T ss_pred HHHHHHhc
Confidence 99999875
No 24
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.11 E-value=5.5e-10 Score=112.53 Aligned_cols=114 Identities=19% Similarity=0.226 Sum_probs=77.2
Q ss_pred ccEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCC
Q 010508 112 ARMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKD 191 (508)
Q Consensus 112 ~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~ 191 (508)
.+++|.-. . +.|.||.++|.|+.+.....+.+ .+.+...|+-+|.| |.|.|--.. .
T Consensus 17 ~~i~y~~~--G---~g~~vvllHG~~~~~~~w~~~~~-----------------~L~~~~~via~D~~-G~G~S~~~~-~ 72 (295)
T PRK03592 17 SRMAYIET--G---EGDPIVFLHGNPTSSYLWRNIIP-----------------HLAGLGRCLAPDLI-GMGASDKPD-I 72 (295)
T ss_pred EEEEEEEe--C---CCCEEEEECCCCCCHHHHHHHHH-----------------HHhhCCEEEEEcCC-CCCCCCCCC-C
Confidence 35665432 1 35789999999988876654444 23444589999998 999986432 1
Q ss_pred CCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCCh
Q 010508 192 DIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDP 268 (508)
Q Consensus 192 ~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp 268 (508)
..+.+..++|+.++++. +...+++|.|+|+||.++-.+|.+..+ .++++++.|+...|
T Consensus 73 --~~~~~~~a~dl~~ll~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~p~----------~v~~lil~~~~~~~ 130 (295)
T PRK03592 73 --DYTFADHARYLDAWFDA-------LGLDDVVLVGHDWGSALGFDWAARHPD----------RVRGIAFMEAIVRP 130 (295)
T ss_pred --CCCHHHHHHHHHHHHHH-------hCCCCeEEEEECHHHHHHHHHHHhChh----------heeEEEEECCCCCC
Confidence 23445566666665553 344689999999999877777765432 48899988875543
No 25
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.10 E-value=2.7e-09 Score=106.58 Aligned_cols=117 Identities=15% Similarity=0.112 Sum_probs=74.3
Q ss_pred CccEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCC
Q 010508 111 SARMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDK 190 (508)
Q Consensus 111 ~~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~ 190 (508)
+..+.|+..+. .+..|.||+++|-++.+.....+.+ --.+..+|+.+|.| |.|.|-...
T Consensus 11 ~~~~~~~~~~~--~~~~~plvllHG~~~~~~~w~~~~~-----------------~L~~~~~vi~~Dl~-G~G~S~~~~- 69 (276)
T TIGR02240 11 GQSIRTAVRPG--KEGLTPLLIFNGIGANLELVFPFIE-----------------ALDPDLEVIAFDVP-GVGGSSTPR- 69 (276)
T ss_pred CcEEEEEEecC--CCCCCcEEEEeCCCcchHHHHHHHH-----------------HhccCceEEEECCC-CCCCCCCCC-
Confidence 34677777532 2345778999996555554433322 12245799999998 999985321
Q ss_pred CCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCC
Q 010508 191 DDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTD 267 (508)
Q Consensus 191 ~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~d 267 (508)
...+.+..++|+.+++.. +...+++|+|+|+||..+-.+|.+-. -.++++++.|+...
T Consensus 70 --~~~~~~~~~~~~~~~i~~-------l~~~~~~LvG~S~GG~va~~~a~~~p----------~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 70 --HPYRFPGLAKLAARMLDY-------LDYGQVNAIGVSWGGALAQQFAHDYP----------ERCKKLILAATAAG 127 (276)
T ss_pred --CcCcHHHHHHHHHHHHHH-------hCcCceEEEEECHHHHHHHHHHHHCH----------HHhhheEEeccCCc
Confidence 123444455666555553 23457999999999976666665432 24889998877653
No 26
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.10 E-value=5.9e-09 Score=109.62 Aligned_cols=131 Identities=16% Similarity=0.148 Sum_probs=79.2
Q ss_pred ccceeeEeEEcCCCCCccEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEE
Q 010508 96 EFGHHAGYYTLPHSQSARMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLF 175 (508)
Q Consensus 96 ~~~~~sGy~~v~~~~~~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLy 175 (508)
.++.-+|+.-. ..+-++||.- . .+...|.||.++|.|+.+.....+.+ ...+..+|+-
T Consensus 101 ~~~~~~~~~~~--~~~~~~~y~~--~-G~~~~~~ivllHG~~~~~~~w~~~~~-----------------~L~~~~~Via 158 (383)
T PLN03084 101 GLKMGAQSQAS--SDLFRWFCVE--S-GSNNNPPVLLIHGFPSQAYSYRKVLP-----------------VLSKNYHAIA 158 (383)
T ss_pred cccccceeEEc--CCceEEEEEe--c-CCCCCCeEEEECCCCCCHHHHHHHHH-----------------HHhcCCEEEE
Confidence 34444454432 2234555432 2 23357899999999887655433332 1223479999
Q ss_pred EeCCCCCCcccccCCC-CCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceE
Q 010508 176 VDQPTGTGFSYTSDKD-DIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHI 254 (508)
Q Consensus 176 iDqPvGtGfSy~~~~~-~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~i 254 (508)
+|.| |.|+|...... ....+.+..++++.+++++. ...+++|+|+|+||..+-.+|.+. +-
T Consensus 159 ~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG~ia~~~a~~~----------P~ 220 (383)
T PLN03084 159 FDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-------KSDKVSLVVQGYFSPPVVKYASAH----------PD 220 (383)
T ss_pred ECCC-CCCCCCCCcccccccCCHHHHHHHHHHHHHHh-------CCCCceEEEECHHHHHHHHHHHhC----------hH
Confidence 9998 99999643221 11234555666766666543 345799999999996555555432 22
Q ss_pred eeeeeeccCCCC
Q 010508 255 NLKGFAIGNGLT 266 (508)
Q Consensus 255 nLkGi~IGNg~~ 266 (508)
.++++++-|+..
T Consensus 221 ~v~~lILi~~~~ 232 (383)
T PLN03084 221 KIKKLILLNPPL 232 (383)
T ss_pred hhcEEEEECCCC
Confidence 488888877654
No 27
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.10 E-value=3.7e-09 Score=102.72 Aligned_cols=101 Identities=25% Similarity=0.297 Sum_probs=66.9
Q ss_pred CCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHH
Q 010508 126 SDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLY 205 (508)
Q Consensus 126 ~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~ 205 (508)
+.|.||+++|.+|.+.....+.+ .+ +..+++.+|.| |.|.|.... ..+-++.++|+.
T Consensus 1 ~~p~vvllHG~~~~~~~w~~~~~----------~l--------~~~~vi~~D~~-G~G~S~~~~----~~~~~~~~~~l~ 57 (242)
T PRK11126 1 GLPWLVFLHGLLGSGQDWQPVGE----------AL--------PDYPRLYIDLP-GHGGSAAIS----VDGFADVSRLLS 57 (242)
T ss_pred CCCEEEEECCCCCChHHHHHHHH----------Hc--------CCCCEEEecCC-CCCCCCCcc----ccCHHHHHHHHH
Confidence 36889999999888765443322 11 23799999998 999985321 124445566655
Q ss_pred HHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCC
Q 010508 206 DFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGL 265 (508)
Q Consensus 206 ~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 265 (508)
++|. ++...+++++|+|+||..+-.+|.+... -.++++++.++.
T Consensus 58 ~~l~-------~~~~~~~~lvG~S~Gg~va~~~a~~~~~---------~~v~~lvl~~~~ 101 (242)
T PRK11126 58 QTLQ-------SYNILPYWLVGYSLGGRIAMYYACQGLA---------GGLCGLIVEGGN 101 (242)
T ss_pred HHHH-------HcCCCCeEEEEECHHHHHHHHHHHhCCc---------ccccEEEEeCCC
Confidence 5554 2345689999999999777777665321 126777776544
No 28
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.07 E-value=3.2e-09 Score=101.35 Aligned_cols=58 Identities=12% Similarity=0.011 Sum_probs=49.2
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
..+|||.+|+.|.+++....+.+.+.+. +-++..+.++||+++.++|++..
T Consensus 188 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~gH~~~~e~p~~~~ 238 (245)
T TIGR01738 188 SVPFLRLYGYLDGLVPAKVVPYLDKLAP-----------------------------HSELYIFAKAAHAPFLSHAEAFC 238 (245)
T ss_pred CCCEEEEeecCCcccCHHHHHHHHHhCC-----------------------------CCeEEEeCCCCCCccccCHHHHH
Confidence 5899999999999999887766655442 33558899999999999999999
Q ss_pred HHHHHHH
Q 010508 486 QMLQSWM 492 (508)
Q Consensus 486 ~ml~~fl 492 (508)
+.|.+||
T Consensus 239 ~~i~~fi 245 (245)
T TIGR01738 239 ALLVAFK 245 (245)
T ss_pred HHHHhhC
Confidence 9999986
No 29
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.02 E-value=2.7e-08 Score=105.11 Aligned_cols=128 Identities=19% Similarity=0.180 Sum_probs=84.4
Q ss_pred CCccEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccC
Q 010508 110 QSARMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSD 189 (508)
Q Consensus 110 ~~~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~ 189 (508)
.+..+|++.+.....+..|+||+++|.++.+...-.+.+ .|. .+-.+++-+|.| |.|.|-...
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~----------~L~------~~Gy~V~~~D~r-GhG~S~~~~ 181 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAK----------QLT------SCGFGVYAMDWI-GHGGSDGLH 181 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHH----------HHH------HCCCEEEEeCCC-CCCCCCCCC
Confidence 345888888877544467899999999776554333322 111 123689999997 999986432
Q ss_pred CCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCC
Q 010508 190 KDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTD 267 (508)
Q Consensus 190 ~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~d 267 (508)
.+..+.+..++|+.++++..-..+| ..+++|+|+|+||..+..++. +.+ ..-.++|+++.+|++.
T Consensus 182 --~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~----~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 182 --GYVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPS----IEDKLEGIVLTSPALR 246 (395)
T ss_pred --CCCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccC----cccccceEEEECcccc
Confidence 2334556667888887776655554 358999999999976654432 111 1225889999877753
No 30
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.01 E-value=8.7e-09 Score=98.19 Aligned_cols=104 Identities=25% Similarity=0.410 Sum_probs=65.4
Q ss_pred CCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHH
Q 010508 127 DPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYD 206 (508)
Q Consensus 127 dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~ 206 (508)
.|+||.++|.+|.+.....+.+ .| .+-.+|+-+|.| |.|.|-.... ....+.++.++++
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~----------~L-------~~~~~v~~~d~~-g~G~s~~~~~-~~~~~~~~~~~~~-- 59 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIE----------LL-------GPHFRCLAIDLP-GHGSSQSPDE-IERYDFEEAAQDI-- 59 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHH----------Hh-------cccCeEEEEcCC-CCCCCCCCCc-cChhhHHHHHHHH--
Confidence 4889999999887665433322 12 134799999997 9998854211 1122333444442
Q ss_pred HHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCC
Q 010508 207 FLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGL 265 (508)
Q Consensus 207 fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 265 (508)
+..+.++ +..++++|.|+|+||..+..+|.+.. -.++++++-++.
T Consensus 60 -~~~~~~~---~~~~~~~l~G~S~Gg~ia~~~a~~~~----------~~v~~lil~~~~ 104 (251)
T TIGR03695 60 -LATLLDQ---LGIEPFFLVGYSMGGRIALYYALQYP----------ERVQGLILESGS 104 (251)
T ss_pred -HHHHHHH---cCCCeEEEEEeccHHHHHHHHHHhCc----------hheeeeEEecCC
Confidence 3333333 24568999999999987777776542 247888876654
No 31
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.99 E-value=6.1e-08 Score=104.51 Aligned_cols=129 Identities=15% Similarity=0.151 Sum_probs=78.9
Q ss_pred eEeEEcCCCCCccEEEEEEeccCCCCCCEEEEECCCCCchhhhhh-hhcCCCeEEeCCCcccccCCCCCCCceEEEEeCC
Q 010508 101 AGYYTLPHSQSARMFYFFFESRNNKSDPVVIWLTGGPGCSSELAL-FYENGPFHIANNLSLVWNDYGWDKASNLLFVDQP 179 (508)
Q Consensus 101 sGy~~v~~~~~~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~gl-f~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqP 179 (508)
.-|++.++ ..+||+.......+..|.||+++|.+|.+.+... +.. .+.. .+.+...++.+|.|
T Consensus 178 ~~~~~~~~---~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~----------~L~~---~~~~~yrVia~Dl~ 241 (481)
T PLN03087 178 TSWLSSSN---ESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFP----------NFSD---AAKSTYRLFAVDLL 241 (481)
T ss_pred eeeEeeCC---eEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHH----------HHHH---HhhCCCEEEEECCC
Confidence 35665432 4788888765544445789999999988765431 101 0111 23456799999998
Q ss_pred CCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeee
Q 010508 180 TGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGF 259 (508)
Q Consensus 180 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi 259 (508)
|.|.|-.... ...+.++.++++. +.+++. +...+++|.|+|+||..+-.+|.+..+ .++++
T Consensus 242 -G~G~S~~p~~--~~ytl~~~a~~l~---~~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~Pe----------~V~~L 302 (481)
T PLN03087 242 -GFGRSPKPAD--SLYTLREHLEMIE---RSVLER---YKVKSFHIVAHSLGCILALALAVKHPG----------AVKSL 302 (481)
T ss_pred -CCCCCcCCCC--CcCCHHHHHHHHH---HHHHHH---cCCCCEEEEEECHHHHHHHHHHHhChH----------hccEE
Confidence 9998853211 1123333444432 234443 345689999999999887777765332 36777
Q ss_pred eccCC
Q 010508 260 AIGNG 264 (508)
Q Consensus 260 ~IGNg 264 (508)
++.++
T Consensus 303 VLi~~ 307 (481)
T PLN03087 303 TLLAP 307 (481)
T ss_pred EEECC
Confidence 77664
No 32
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.98 E-value=2.2e-08 Score=122.37 Aligned_cols=116 Identities=20% Similarity=0.270 Sum_probs=72.8
Q ss_pred EEEEEE--eccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCC-
Q 010508 114 MFYFFF--ESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDK- 190 (508)
Q Consensus 114 lFy~ff--es~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~- 190 (508)
+-||.. +..+.+..|.||+|||.+|.+.....+.+ ...+..+++.+|.| |.|.|.....
T Consensus 1356 ~~~~i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~-----------------~L~~~~rVi~~Dl~-G~G~S~~~~~~ 1417 (1655)
T PLN02980 1356 FSCLIKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMK-----------------AISGSARCISIDLP-GHGGSKIQNHA 1417 (1655)
T ss_pred eEEEEEEEecCCCCCCCeEEEECCCCCCHHHHHHHHH-----------------HHhCCCEEEEEcCC-CCCCCCCcccc
Confidence 444443 33333367899999999998775433332 12234799999998 9999864321
Q ss_pred ----CCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCC
Q 010508 191 ----DDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNG 264 (508)
Q Consensus 191 ----~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg 264 (508)
.....+.+..++++.++++. +...+++|+|+|+||..+-.+|.+..+ .++++++-+|
T Consensus 1418 ~~~~~~~~~si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~----------~V~~lVlis~ 1478 (1655)
T PLN02980 1418 KETQTEPTLSVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD----------KIEGAVIISG 1478 (1655)
T ss_pred ccccccccCCHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH----------hhCEEEEECC
Confidence 11123445566666655542 344689999999999777776654322 3677776554
No 33
>PLN02578 hydrolase
Probab=98.97 E-value=3.5e-08 Score=102.64 Aligned_cols=111 Identities=17% Similarity=0.177 Sum_probs=69.8
Q ss_pred ccEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCC
Q 010508 112 ARMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKD 191 (508)
Q Consensus 112 ~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~ 191 (508)
.+++|.-.. +.|-||.++|-++.+.......+ ...+..+|+.+|.| |.|.|-...
T Consensus 76 ~~i~Y~~~g-----~g~~vvliHG~~~~~~~w~~~~~-----------------~l~~~~~v~~~D~~-G~G~S~~~~-- 130 (354)
T PLN02578 76 HKIHYVVQG-----EGLPIVLIHGFGASAFHWRYNIP-----------------ELAKKYKVYALDLL-GFGWSDKAL-- 130 (354)
T ss_pred EEEEEEEcC-----CCCeEEEECCCCCCHHHHHHHHH-----------------HHhcCCEEEEECCC-CCCCCCCcc--
Confidence 466665322 23457899987654433322211 12345799999998 999875321
Q ss_pred CCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCC
Q 010508 192 DIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGL 265 (508)
Q Consensus 192 ~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 265 (508)
...+.+..++|+.+|+++. ...+++|.|+|+||..+..+|.+..+ .++++++.|+.
T Consensus 131 -~~~~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p~----------~v~~lvLv~~~ 186 (354)
T PLN02578 131 -IEYDAMVWRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGYPE----------LVAGVALLNSA 186 (354)
T ss_pred -cccCHHHHHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhChH----------hcceEEEECCC
Confidence 2234445566777666643 24689999999999777777765432 47888876653
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.96 E-value=6.1e-08 Score=102.78 Aligned_cols=119 Identities=14% Similarity=0.181 Sum_probs=72.5
Q ss_pred cEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCC
Q 010508 113 RMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDD 192 (508)
Q Consensus 113 ~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~ 192 (508)
.+.+..++. +++.|.||.++|.++.+.......+ .+.+..+|+-+|.| |.|.|-... ..
T Consensus 93 ~~~~~~~~~--~~~~p~vvllHG~~~~~~~~~~~~~-----------------~L~~~~~vi~~D~r-G~G~S~~~~-~~ 151 (402)
T PLN02894 93 FINTVTFDS--KEDAPTLVMVHGYGASQGFFFRNFD-----------------ALASRFRVIAIDQL-GWGGSSRPD-FT 151 (402)
T ss_pred eEEEEEecC--CCCCCEEEEECCCCcchhHHHHHHH-----------------HHHhCCEEEEECCC-CCCCCCCCC-cc
Confidence 454444432 2367999999999776544322211 12344789999997 999884321 11
Q ss_pred CCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCC
Q 010508 193 IRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLT 266 (508)
Q Consensus 193 ~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~ 266 (508)
..+.+.+.+.+.+.+.+|.+.. ...+++|+|+|+||..+-.+|.+. +-.++++++.++..
T Consensus 152 -~~~~~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~----------p~~v~~lvl~~p~~ 211 (402)
T PLN02894 152 -CKSTEETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKH----------PEHVQHLILVGPAG 211 (402)
T ss_pred -cccHHHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhC----------chhhcEEEEECCcc
Confidence 1222334444555666666542 345899999999997666665543 22477888776653
No 35
>PRK07581 hypothetical protein; Validated
Probab=98.95 E-value=1.4e-07 Score=97.22 Aligned_cols=59 Identities=10% Similarity=0.110 Sum_probs=51.5
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcC-CCccCCccChHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHD-AGHMVPMDQPKAS 484 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~-AGHmvP~DqP~~a 484 (508)
.++|||..|+.|.++|....+.+.+.+. +..+.+|.+ +||+++.+||+..
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip-----------------------------~a~l~~i~~~~GH~~~~~~~~~~ 325 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIP-----------------------------NAELRPIESIWGHLAGFGQNPAD 325 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-----------------------------CCeEEEeCCCCCccccccCcHHH
Confidence 6899999999999999988887766652 345688998 9999999999999
Q ss_pred HHHHHHHHc
Q 010508 485 LQMLQSWMQ 493 (508)
Q Consensus 485 ~~ml~~fl~ 493 (508)
..++++|+.
T Consensus 326 ~~~~~~~~~ 334 (339)
T PRK07581 326 IAFIDAALK 334 (339)
T ss_pred HHHHHHHHH
Confidence 999999985
No 36
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.92 E-value=6.6e-08 Score=100.26 Aligned_cols=103 Identities=16% Similarity=0.181 Sum_probs=66.5
Q ss_pred CCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHH
Q 010508 125 KSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDL 204 (508)
Q Consensus 125 ~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~ 204 (508)
++.|.||+++|.+|++.....+.+ .| .+..+++-+|.| |.|.|-... ...+.+..++++
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~----------~l-------~~~~~v~~~d~~-g~G~s~~~~---~~~~~~~~~~~~ 187 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHA----------AL-------AAGRPVIALDLP-GHGASSKAV---GAGSLDELAAAV 187 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHH----------HH-------hcCCEEEEEcCC-CCCCCCCCC---CCCCHHHHHHHH
Confidence 456889999999888775544433 12 123689999998 999884321 123444555555
Q ss_pred HHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCC
Q 010508 205 YDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGL 265 (508)
Q Consensus 205 ~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 265 (508)
.++++ . +...+++|.|+|+||..+..+|.+-. -.++++++.++.
T Consensus 188 ~~~~~----~---~~~~~~~lvG~S~Gg~~a~~~a~~~~----------~~v~~lv~~~~~ 231 (371)
T PRK14875 188 LAFLD----A---LGIERAHLVGHSMGGAVALRLAARAP----------QRVASLTLIAPA 231 (371)
T ss_pred HHHHH----h---cCCccEEEEeechHHHHHHHHHHhCc----------hheeEEEEECcC
Confidence 55443 2 34457999999999988877776521 236677665443
No 37
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.91 E-value=2.1e-07 Score=94.60 Aligned_cols=125 Identities=17% Similarity=0.294 Sum_probs=75.2
Q ss_pred eEeEEcCCCCCccEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCC-CCCceEEEEeCC
Q 010508 101 AGYYTLPHSQSARMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGW-DKASNLLFVDQP 179 (508)
Q Consensus 101 sGy~~v~~~~~~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW-~k~anvLyiDqP 179 (508)
.+|+++.+ +.+|+|.-. .+++.|-||.++||||.++..... . .| .+..+|+-+|+|
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~~~~lvllHG~~~~~~~~~~~-~-----------------~~~~~~~~vi~~D~~ 62 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPDGKPVVFLHGGPGSGTDPGCR-R-----------------FFDPETYRIVLFDQR 62 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCCCCEEEEECCCCCCCCCHHHH-h-----------------ccCccCCEEEEECCC
Confidence 46787753 356777542 233345578999999876521110 0 11 135799999997
Q ss_pred CCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeee
Q 010508 180 TGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGF 259 (508)
Q Consensus 180 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi 259 (508)
|.|.|..... ....+.++.++|+..++ +. +...+++++|+||||..+-.+|.+..+ .++++
T Consensus 63 -G~G~S~~~~~-~~~~~~~~~~~dl~~l~----~~---l~~~~~~lvG~S~GG~ia~~~a~~~p~----------~v~~l 123 (306)
T TIGR01249 63 -GCGKSTPHAC-LEENTTWDLVADIEKLR----EK---LGIKNWLVFGGSWGSTLALAYAQTHPE----------VVTGL 123 (306)
T ss_pred -CCCCCCCCCC-cccCCHHHHHHHHHHHH----HH---cCCCCEEEEEECHHHHHHHHHHHHChH----------hhhhh
Confidence 9999964321 11223334455544433 32 234579999999999777666655322 36777
Q ss_pred eccCCCCC
Q 010508 260 AIGNGLTD 267 (508)
Q Consensus 260 ~IGNg~~d 267 (508)
++-+..+.
T Consensus 124 vl~~~~~~ 131 (306)
T TIGR01249 124 VLRGIFLL 131 (306)
T ss_pred eeeccccC
Confidence 77665554
No 38
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.89 E-value=1.2e-07 Score=98.13 Aligned_cols=62 Identities=10% Similarity=0.074 Sum_probs=51.8
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcC-CCccCCccChHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHD-AGHMVPMDQPKAS 484 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~-AGHmvP~DqP~~a 484 (508)
.+++||..|+.|.++|....++..+.+. .+-.+++|.+ |||+++.++|++.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~----------------------------p~a~l~~i~~~aGH~~~lE~Pe~~ 328 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG----------------------------PRGSLRVLRSPYGHDAFLKETDRI 328 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC----------------------------CCCeEEEEeCCccHHHHhcCHHHH
Confidence 5899999999999999888877776652 1234578874 9999999999999
Q ss_pred HHHHHHHHcCC
Q 010508 485 LQMLQSWMQGK 495 (508)
Q Consensus 485 ~~ml~~fl~g~ 495 (508)
..+|.+|+...
T Consensus 329 ~~~l~~FL~~~ 339 (343)
T PRK08775 329 DAILTTALRST 339 (343)
T ss_pred HHHHHHHHHhc
Confidence 99999999653
No 39
>PRK10749 lysophospholipase L2; Provisional
Probab=98.82 E-value=1.4e-07 Score=97.11 Aligned_cols=124 Identities=19% Similarity=0.169 Sum_probs=76.9
Q ss_pred CccEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCC
Q 010508 111 SARMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDK 190 (508)
Q Consensus 111 ~~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~ 190 (508)
+.+++|+.+... ..+|+||.++|-.+.+....-+.. .+.. +-.+|+-+|.| |.|.|-....
T Consensus 40 g~~l~~~~~~~~--~~~~~vll~HG~~~~~~~y~~~~~----------~l~~------~g~~v~~~D~~-G~G~S~~~~~ 100 (330)
T PRK10749 40 DIPIRFVRFRAP--HHDRVVVICPGRIESYVKYAELAY----------DLFH------LGYDVLIIDHR-GQGRSGRLLD 100 (330)
T ss_pred CCEEEEEEccCC--CCCcEEEEECCccchHHHHHHHHH----------HHHH------CCCeEEEEcCC-CCCCCCCCCC
Confidence 357888887542 356799999998554433222211 0111 23589999997 9999853211
Q ss_pred C---CCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCC
Q 010508 191 D---DIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLT 266 (508)
Q Consensus 191 ~---~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~ 266 (508)
. ....+-+..++|+..+++...+.+ ...+++++|+|+||..+-.+|.+- +-.++|+++.+|..
T Consensus 101 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~l~GhSmGG~ia~~~a~~~----------p~~v~~lvl~~p~~ 166 (330)
T PRK10749 101 DPHRGHVERFNDYVDDLAAFWQQEIQPG---PYRKRYALAHSMGGAILTLFLQRH----------PGVFDAIALCAPMF 166 (330)
T ss_pred CCCcCccccHHHHHHHHHHHHHHHHhcC---CCCCeEEEEEcHHHHHHHHHHHhC----------CCCcceEEEECchh
Confidence 1 111234556777777776654432 356899999999996665555432 12478999877764
No 40
>PLN02965 Probable pheophorbidase
Probab=98.78 E-value=8.9e-08 Score=94.52 Aligned_cols=59 Identities=14% Similarity=0.125 Sum_probs=50.2
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
.+++|+..|..|.++|....++..+.+. +-.+..+.+|||+++.++|++..
T Consensus 193 ~vP~lvi~g~~D~~~~~~~~~~~~~~~~-----------------------------~a~~~~i~~~GH~~~~e~p~~v~ 243 (255)
T PLN02965 193 KVPRVYIKTAKDNLFDPVRQDVMVENWP-----------------------------PAQTYVLEDSDHSAFFSVPTTLF 243 (255)
T ss_pred CCCEEEEEcCCCCCCCHHHHHHHHHhCC-----------------------------cceEEEecCCCCchhhcCHHHHH
Confidence 6999999999999999877766665542 34557889999999999999999
Q ss_pred HHHHHHHc
Q 010508 486 QMLQSWMQ 493 (508)
Q Consensus 486 ~ml~~fl~ 493 (508)
++|.+|+.
T Consensus 244 ~~l~~~~~ 251 (255)
T PLN02965 244 QYLLQAVS 251 (255)
T ss_pred HHHHHHHH
Confidence 99999974
No 41
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.77 E-value=5e-07 Score=91.09 Aligned_cols=135 Identities=15% Similarity=0.138 Sum_probs=82.3
Q ss_pred eeEeEEcCCCCCccEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCC
Q 010508 100 HAGYYTLPHSQSARMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQP 179 (508)
Q Consensus 100 ~sGy~~v~~~~~~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqP 179 (508)
..+|++++ .+++++.|. .....|+|+.|+|=|=.+=..-.-. ..|. .....++.+|.+
T Consensus 23 ~hk~~~~~-----gI~~h~~e~-g~~~gP~illlHGfPe~wyswr~q~----------~~la------~~~~rviA~Dlr 80 (322)
T KOG4178|consen 23 SHKFVTYK-----GIRLHYVEG-GPGDGPIVLLLHGFPESWYSWRHQI----------PGLA------SRGYRVIAPDLR 80 (322)
T ss_pred ceeeEEEc-----cEEEEEEee-cCCCCCEEEEEccCCccchhhhhhh----------hhhh------hcceEEEecCCC
Confidence 46777773 388888877 3349999999999775432110000 0011 011689999996
Q ss_pred CCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeee
Q 010508 180 TGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGF 259 (508)
Q Consensus 180 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi 259 (508)
|-|+|-+-... ...+.+..+.|+..+|. .+....+++.||+||+..+=.+|....+.-+ -.+++++.
T Consensus 81 -GyG~Sd~P~~~-~~Yt~~~l~~di~~lld-------~Lg~~k~~lvgHDwGaivaw~la~~~Perv~----~lv~~nv~ 147 (322)
T KOG4178|consen 81 -GYGFSDAPPHI-SEYTIDELVGDIVALLD-------HLGLKKAFLVGHDWGAIVAWRLALFYPERVD----GLVTLNVP 147 (322)
T ss_pred -CCCCCCCCCCc-ceeeHHHHHHHHHHHHH-------HhccceeEEEeccchhHHHHHHHHhChhhcc----eEEEecCC
Confidence 99998754331 12344556667666555 3446689999999999777777766655321 13444444
Q ss_pred eccCCCCChhh
Q 010508 260 AIGNGLTDPAI 270 (508)
Q Consensus 260 ~IGNg~~dp~~ 270 (508)
.. |+..+|..
T Consensus 148 ~~-~p~~~~~~ 157 (322)
T KOG4178|consen 148 FP-NPKLKPLD 157 (322)
T ss_pred CC-Ccccchhh
Confidence 44 56666544
No 42
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.75 E-value=5.8e-07 Score=92.83 Aligned_cols=150 Identities=13% Similarity=0.181 Sum_probs=83.6
Q ss_pred CCccEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhc--------CCCeEEeCCCccccc---CCCC-CCCceEEEEe
Q 010508 110 QSARMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYE--------NGPFHIANNLSLVWN---DYGW-DKASNLLFVD 177 (508)
Q Consensus 110 ~~~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E--------~GP~~i~~~~~l~~N---~~sW-~k~anvLyiD 177 (508)
.+..++++..+.. ..+.+|+.++|=-+-+. . -|++ -+|+.|+.+.=...+ -... .+-..|+-+|
T Consensus 6 ~g~~l~~~~~~~~--~~kg~v~i~HG~~eh~~-~-~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D 81 (332)
T TIGR01607 6 DGLLLKTYSWIVK--NAIGIIVLIHGLKSHLR-L-QFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLD 81 (332)
T ss_pred CCCeEEEeeeecc--CCeEEEEEECCCchhhh-h-hhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEec
Confidence 3456777776553 34579999998533332 1 1111 123444322100000 0011 2346999999
Q ss_pred CCCCCCcccccCC-CCCCCChhhhHHHHHHHHHHHHHhC----------------CCCC-CCCEEEEcccccccchHHHH
Q 010508 178 QPTGTGFSYTSDK-DDIRHDEEGVSNDLYDFLQAFFAEH----------------PQYA-KNDFYITGESYAGHYIPAFA 239 (508)
Q Consensus 178 qPvGtGfSy~~~~-~~~~~~~~~~a~d~~~fL~~F~~~~----------------Pe~~-~~~~yI~GESYgG~yvP~lA 239 (508)
.| |.|.|-+.+. .....+-+..++|+.++++..-+.. .++. ..|+||.|||.||..+..++
T Consensus 82 ~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~ 160 (332)
T TIGR01607 82 LQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLL 160 (332)
T ss_pred cc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHH
Confidence 96 9999886432 1111245667788888777553310 0233 57899999999997776666
Q ss_pred HHHHhcccccccceEeeeeeeccCCCC
Q 010508 240 SRVHKGNKEKQGIHINLKGFAIGNGLT 266 (508)
Q Consensus 240 ~~i~~~n~~~~~~~inLkGi~IGNg~~ 266 (508)
.++.+..... -...++|+++-.|.+
T Consensus 161 ~~~~~~~~~~--~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 161 ELLGKSNENN--DKLNIKGCISLSGMI 185 (332)
T ss_pred HHhccccccc--cccccceEEEeccce
Confidence 5543221000 123688988766665
No 43
>PRK06489 hypothetical protein; Provisional
Probab=98.73 E-value=6.9e-07 Score=93.13 Aligned_cols=59 Identities=12% Similarity=0.003 Sum_probs=47.3
Q ss_pred CceEEEEeecCcccCchhhH--HHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCC----CccCCcc
Q 010508 406 GIRVLIYAGEYDLICNWLGN--SKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDA----GHMVPMD 479 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~--~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~A----GHmvP~D 479 (508)
.++|||.+|+.|.++|.... ++..+.+ .+..+++|.+| ||++. +
T Consensus 292 ~~PvLvI~G~~D~~~p~~~~~~~~la~~i-----------------------------p~a~l~~i~~a~~~~GH~~~-e 341 (360)
T PRK06489 292 KAPVLAINSADDERNPPETGVMEAALKRV-----------------------------KHGRLVLIPASPETRGHGTT-G 341 (360)
T ss_pred CCCEEEEecCCCcccChhhHHHHHHHHhC-----------------------------cCCeEEEECCCCCCCCcccc-c
Confidence 68999999999999987754 3444333 23456899996 99985 8
Q ss_pred ChHHHHHHHHHHHcC
Q 010508 480 QPKASLQMLQSWMQG 494 (508)
Q Consensus 480 qP~~a~~ml~~fl~g 494 (508)
+|++..+.|.+|+..
T Consensus 342 ~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 342 SAKFWKAYLAEFLAQ 356 (360)
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999964
No 44
>PLN02511 hydrolase
Probab=98.69 E-value=1.2e-06 Score=92.59 Aligned_cols=92 Identities=17% Similarity=0.291 Sum_probs=61.1
Q ss_pred CCCEEEEECCCCCchhh--h-hhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHH
Q 010508 126 SDPVVIWLTGGPGCSSE--L-ALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSN 202 (508)
Q Consensus 126 ~dPlvlWlnGGPGcSS~--~-glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~ 202 (508)
+.|+||.|+|..|+|.. . .+... + ..+-.+++-+|.| |.|-|-......+ ....++
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~-----------~------~~~g~~vv~~d~r-G~G~s~~~~~~~~---~~~~~~ 157 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLR-----------A------RSKGWRVVVFNSR-GCADSPVTTPQFY---SASFTG 157 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHH-----------H------HHCCCEEEEEecC-CCCCCCCCCcCEE---cCCchH
Confidence 78999999999998642 1 11111 1 1234689999997 9998864322111 234567
Q ss_pred HHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHH
Q 010508 203 DLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASR 241 (508)
Q Consensus 203 d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~ 241 (508)
|+.++++..-.++| ..+++++|+|.||..+-.++.+
T Consensus 158 Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~ 193 (388)
T PLN02511 158 DLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGE 193 (388)
T ss_pred HHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHh
Confidence 88887776655555 4689999999999766555544
No 45
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.68 E-value=3.4e-07 Score=102.28 Aligned_cols=122 Identities=15% Similarity=0.213 Sum_probs=75.1
Q ss_pred EcCCCCCccEEEEEEeccCC-C--CCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCC
Q 010508 105 TLPHSQSARMFYFFFESRNN-K--SDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTG 181 (508)
Q Consensus 105 ~v~~~~~~~lFy~ffes~~~-~--~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvG 181 (508)
.+....+..+..|+..-.+. + +-|+|++++||| +++.+ +.+..... .=+.+-+.||+++.---
T Consensus 369 ~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~~~-------~~~~~~~q-----~~~~~G~~V~~~n~RGS 434 (620)
T COG1506 369 TYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQVG-------YSFNPEIQ-----VLASAGYAVLAPNYRGS 434 (620)
T ss_pred EEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccccc-------cccchhhH-----HHhcCCeEEEEeCCCCC
Confidence 33334456888888876543 3 349999999999 33333 11111110 12345578999996444
Q ss_pred CCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhc
Q 010508 182 TGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKG 245 (508)
Q Consensus 182 tGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~ 245 (508)
+||+..-.......--....+|+.+++. |+++.|..-..++.|+|.|||| +++..++.+
T Consensus 435 ~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGG----ymtl~~~~~ 493 (620)
T COG1506 435 TGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGG----YMTLLAATK 493 (620)
T ss_pred CccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHH----HHHHHHHhc
Confidence 4543321111111111234579999999 9999998888899999999999 666666554
No 46
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.64 E-value=3.8e-06 Score=88.37 Aligned_cols=65 Identities=11% Similarity=0.129 Sum_probs=52.6
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEc-CCCccCCccChHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVH-DAGHMVPMDQPKAS 484 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~-~AGHmvP~DqP~~a 484 (508)
.+++||..|+.|.++|....++..+.+.=. -...+++.|. ++||+.++++|++.
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~~a-------------------------~~~~~l~~i~~~~GH~~~le~p~~~ 363 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALLAA-------------------------GADVSYAEIDSPYGHDAFLLDDPRY 363 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHHhc-------------------------CCCeEEEEeCCCCCchhHhcCHHHH
Confidence 589999999999999998887776666300 0123567786 99999999999999
Q ss_pred HHHHHHHHcCC
Q 010508 485 LQMLQSWMQGK 495 (508)
Q Consensus 485 ~~ml~~fl~g~ 495 (508)
.+.|.+|+...
T Consensus 364 ~~~L~~FL~~~ 374 (379)
T PRK00175 364 GRLVRAFLERA 374 (379)
T ss_pred HHHHHHHHHhh
Confidence 99999999764
No 47
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.62 E-value=2.9e-06 Score=86.14 Aligned_cols=112 Identities=15% Similarity=0.261 Sum_probs=73.2
Q ss_pred CCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHH
Q 010508 124 NKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSND 203 (508)
Q Consensus 124 ~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d 203 (508)
+.+.+-++.++|= |.++ |+|.- |=-+..+.-||..||+| |-|+|-.. ....+.+.+-+.
T Consensus 87 ~~~~~plVliHGy-GAg~--g~f~~--------------Nf~~La~~~~vyaiDll-G~G~SSRP---~F~~d~~~~e~~ 145 (365)
T KOG4409|consen 87 SANKTPLVLIHGY-GAGL--GLFFR--------------NFDDLAKIRNVYAIDLL-GFGRSSRP---KFSIDPTTAEKE 145 (365)
T ss_pred ccCCCcEEEEecc-chhH--HHHHH--------------hhhhhhhcCceEEeccc-CCCCCCCC---CCCCCcccchHH
Confidence 3456666678873 3433 22322 22245567899999998 99998643 233344445568
Q ss_pred HHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChh
Q 010508 204 LYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPA 269 (508)
Q Consensus 204 ~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 269 (508)
+.+-+++|.++. .-.+++|.|||+||......|.+..++ ++-+++-+||--|.
T Consensus 146 fvesiE~WR~~~---~L~KmilvGHSfGGYLaa~YAlKyPer----------V~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 146 FVESIEQWRKKM---GLEKMILVGHSFGGYLAAKYALKYPER----------VEKLILVSPWGFPE 198 (365)
T ss_pred HHHHHHHHHHHc---CCcceeEeeccchHHHHHHHHHhChHh----------hceEEEeccccccc
Confidence 889999999864 345899999999996555555554443 66678877775443
No 48
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.52 E-value=1.2e-06 Score=90.26 Aligned_cols=61 Identities=20% Similarity=0.308 Sum_probs=52.8
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
+.+|||..|+.|.++|....+...+.+ .|..+..|.+|||.+.+++|++..
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~-----------------------------pn~~~~~I~~~gH~~h~e~Pe~~~ 314 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKL-----------------------------PNAELVEIPGAGHLPHLERPEEVA 314 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhC-----------------------------CCceEEEeCCCCcccccCCHHHHH
Confidence 478999999999999998666555443 378889999999999999999999
Q ss_pred HHHHHHHcCC
Q 010508 486 QMLQSWMQGK 495 (508)
Q Consensus 486 ~ml~~fl~g~ 495 (508)
..|..|++..
T Consensus 315 ~~i~~Fi~~~ 324 (326)
T KOG1454|consen 315 ALLRSFIARL 324 (326)
T ss_pred HHHHHHHHHh
Confidence 9999999753
No 49
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.51 E-value=1.7e-05 Score=82.44 Aligned_cols=63 Identities=13% Similarity=0.197 Sum_probs=50.2
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEc-CCCccCCccChHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVH-DAGHMVPMDQPKAS 484 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~-~AGHmvP~DqP~~a 484 (508)
.++|||+.|+.|.++|....++..+.+. .+. -..+|+.|. +|||+++.++|++.
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~--------~~~-----------------~~v~~~~i~~~~GH~~~le~p~~~ 342 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALP--------AAG-----------------LRVTYVEIESPYGHDAFLVETDQV 342 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHh--------hcC-----------------CceEEEEeCCCCCcchhhcCHHHH
Confidence 5899999999999999998888777663 000 012445564 89999999999999
Q ss_pred HHHHHHHHc
Q 010508 485 LQMLQSWMQ 493 (508)
Q Consensus 485 ~~ml~~fl~ 493 (508)
.+.|.+|++
T Consensus 343 ~~~l~~FL~ 351 (351)
T TIGR01392 343 EELIRGFLR 351 (351)
T ss_pred HHHHHHHhC
Confidence 999999984
No 50
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.51 E-value=6.7e-06 Score=87.58 Aligned_cols=79 Identities=19% Similarity=0.174 Sum_probs=54.3
Q ss_pred ceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccc
Q 010508 171 SNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQ 250 (508)
Q Consensus 171 anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~ 250 (508)
.+||-+|.| |+|.|-... ...+ ...+...+.+|+...|.....++.|+|+|+||.+++.+|..-.
T Consensus 223 y~vl~~D~p-G~G~s~~~~---~~~d----~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p------- 287 (414)
T PRK05077 223 IAMLTIDMP-SVGFSSKWK---LTQD----SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP------- 287 (414)
T ss_pred CEEEEECCC-CCCCCCCCC---cccc----HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC-------
Confidence 689999999 999985321 1111 1222345566777777777789999999999988887775421
Q ss_pred cceEeeeeeeccCCCCC
Q 010508 251 GIHINLKGFAIGNGLTD 267 (508)
Q Consensus 251 ~~~inLkGi~IGNg~~d 267 (508)
-.++++++.+|.++
T Consensus 288 ---~ri~a~V~~~~~~~ 301 (414)
T PRK05077 288 ---PRLKAVACLGPVVH 301 (414)
T ss_pred ---cCceEEEEECCccc
Confidence 24778887666653
No 51
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.48 E-value=1.3e-06 Score=83.07 Aligned_cols=55 Identities=15% Similarity=0.234 Sum_probs=47.4
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
.+++|+++|+.|.++|........+.+. +..++.+.++||....+.|++..
T Consensus 175 ~~p~l~i~~~~D~~~p~~~~~~~~~~~~-----------------------------~~~~~~~~~~GH~~~~~~~~~~~ 225 (230)
T PF00561_consen 175 KVPTLIIWGEDDPLVPPESSEQLAKLIP-----------------------------NSQLVLIEGSGHFAFLEGPDEFN 225 (230)
T ss_dssp TSEEEEEEETTCSSSHHHHHHHHHHHST-----------------------------TEEEEEETTCCSTHHHHSHHHHH
T ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHhcC-----------------------------CCEEEECCCCChHHHhcCHHhhh
Confidence 6999999999999999998888555442 45668999999999999999999
Q ss_pred HHHH
Q 010508 486 QMLQ 489 (508)
Q Consensus 486 ~ml~ 489 (508)
++|.
T Consensus 226 ~~i~ 229 (230)
T PF00561_consen 226 EIII 229 (230)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 8885
No 52
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.46 E-value=1.1e-05 Score=82.06 Aligned_cols=128 Identities=15% Similarity=0.180 Sum_probs=83.2
Q ss_pred CCccEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccC
Q 010508 110 QSARMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSD 189 (508)
Q Consensus 110 ~~~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~ 189 (508)
.+..++|+.+...+++. -+||+++|.=.++.-..-+.+ .|..+. ..|+=+|+| |.|.|.- .
T Consensus 18 d~~~~~~~~~~~~~~~~-g~Vvl~HG~~Eh~~ry~~la~----------~l~~~G------~~V~~~D~R-GhG~S~r-~ 78 (298)
T COG2267 18 DGTRLRYRTWAAPEPPK-GVVVLVHGLGEHSGRYEELAD----------DLAARG------FDVYALDLR-GHGRSPR-G 78 (298)
T ss_pred CCceEEEEeecCCCCCC-cEEEEecCchHHHHHHHHHHH----------HHHhCC------CEEEEecCC-CCCCCCC-C
Confidence 45689999998765444 899999998666553332222 133333 488999997 9999973 1
Q ss_pred CCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChh
Q 010508 190 KDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPA 269 (508)
Q Consensus 190 ~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 269 (508)
......+-+....|+-.|++..-.. ....++||+|||.||..+...+.+.. -+++|+++-+|++...
T Consensus 79 ~rg~~~~f~~~~~dl~~~~~~~~~~---~~~~p~~l~gHSmGg~Ia~~~~~~~~----------~~i~~~vLssP~~~l~ 145 (298)
T COG2267 79 QRGHVDSFADYVDDLDAFVETIAEP---DPGLPVFLLGHSMGGLIALLYLARYP----------PRIDGLVLSSPALGLG 145 (298)
T ss_pred CcCCchhHHHHHHHHHHHHHHHhcc---CCCCCeEEEEeCcHHHHHHHHHHhCC----------ccccEEEEECccccCC
Confidence 2222223344455555555544333 34679999999999966555554432 4689999988877654
No 53
>PRK05855 short chain dehydrogenase; Validated
Probab=98.45 E-value=7.8e-06 Score=89.81 Aligned_cols=100 Identities=11% Similarity=0.114 Sum_probs=65.8
Q ss_pred CccEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCC
Q 010508 111 SARMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDK 190 (508)
Q Consensus 111 ~~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~ 190 (508)
+..+.|+-+ .+++.|.||.++|.++.+....-+.+ -+.+..+|+.+|.| |.|.|.....
T Consensus 12 g~~l~~~~~---g~~~~~~ivllHG~~~~~~~w~~~~~-----------------~L~~~~~Vi~~D~~-G~G~S~~~~~ 70 (582)
T PRK05855 12 GVRLAVYEW---GDPDRPTVVLVHGYPDNHEVWDGVAP-----------------LLADRFRVVAYDVR-GAGRSSAPKR 70 (582)
T ss_pred CEEEEEEEc---CCCCCCeEEEEcCCCchHHHHHHHHH-----------------HhhcceEEEEecCC-CCCCCCCCCc
Confidence 456766644 23468999999999877654433333 12344789999998 9999975332
Q ss_pred CCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHH
Q 010508 191 DDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAF 238 (508)
Q Consensus 191 ~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~l 238 (508)
. ...+.+..++|+.++++.. . ...+++|+|+|+||..+-.+
T Consensus 71 ~-~~~~~~~~a~dl~~~i~~l-----~-~~~~~~lvGhS~Gg~~a~~~ 111 (582)
T PRK05855 71 T-AAYTLARLADDFAAVIDAV-----S-PDRPVHLLAHDWGSIQGWEA 111 (582)
T ss_pred c-cccCHHHHHHHHHHHHHHh-----C-CCCcEEEEecChHHHHHHHH
Confidence 1 1235566778888877643 1 13469999999999544333
No 54
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.39 E-value=1.4e-05 Score=80.17 Aligned_cols=59 Identities=8% Similarity=0.050 Sum_probs=48.3
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
.+++++..|..|.++|..-.+++++.+. +-.++++ ++||++++.+|+...
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~-----------------------------~~~~~~l-~~gH~p~ls~P~~~~ 260 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP-----------------------------PSQVYEL-ESDHSPFFSTPFLLF 260 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC-----------------------------ccEEEEE-CCCCCccccCHHHHH
Confidence 5899999999999999988877776653 1133667 599999999999999
Q ss_pred HHHHHHHcC
Q 010508 486 QMLQSWMQG 494 (508)
Q Consensus 486 ~ml~~fl~g 494 (508)
++|.+....
T Consensus 261 ~~i~~~a~~ 269 (273)
T PLN02211 261 GLLIKAAAS 269 (273)
T ss_pred HHHHHHHHH
Confidence 999987653
No 55
>PRK10566 esterase; Provisional
Probab=98.38 E-value=1.5e-05 Score=78.00 Aligned_cols=108 Identities=16% Similarity=0.212 Sum_probs=63.8
Q ss_pred EEEEEEeccCC-CCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCC-ceEEEEeCCCCCCcccccCCC
Q 010508 114 MFYFFFESRNN-KSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKA-SNLLFVDQPTGTGFSYTSDKD 191 (508)
Q Consensus 114 lFy~ffes~~~-~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~-anvLyiDqPvGtGfSy~~~~~ 191 (508)
.+|..++.... +..|+||.++|++|.......+.. .+.+. .+++.+|.| |.|-|+.....
T Consensus 13 ~~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-----------------~l~~~G~~v~~~d~~-g~G~~~~~~~~ 74 (249)
T PRK10566 13 EVLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAV-----------------ALAQAGFRVIMPDAP-MHGARFSGDEA 74 (249)
T ss_pred ceEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHH-----------------HHHhCCCEEEEecCC-cccccCCCccc
Confidence 34555555332 367999999999887543322211 12222 589999987 88877542211
Q ss_pred CCCCCh-----hhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHH
Q 010508 192 DIRHDE-----EGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASR 241 (508)
Q Consensus 192 ~~~~~~-----~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~ 241 (508)
.+.+. ....+|+.++ ..++.+.+....++++|+|+|+||..+..++.+
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 75 -RRLNHFWQILLQNMQEFPTL-RAAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred -cchhhHHHHHHHHHHHHHHH-HHHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 11111 1233455443 345555544556789999999999777766543
No 56
>PRK10985 putative hydrolase; Provisional
Probab=98.32 E-value=9.2e-05 Score=76.10 Aligned_cols=93 Identities=14% Similarity=0.085 Sum_probs=51.5
Q ss_pred CCCEEEEECCCCCchhh--hhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHH
Q 010508 126 SDPVVIWLTGGPGCSSE--LALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSND 203 (508)
Q Consensus 126 ~dPlvlWlnGGPGcSS~--~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d 203 (508)
++|+||.++|.+|++.. .-.+.+ .+... -.+++-+|.+ |.|-|-......+. . ...+|
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~----------~l~~~------G~~v~~~d~r-G~g~~~~~~~~~~~--~-~~~~D 116 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLE----------AAQKR------GWLGVVMHFR-GCSGEPNRLHRIYH--S-GETED 116 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHH----------HHHHC------CCEEEEEeCC-CCCCCccCCcceEC--C-CchHH
Confidence 78999999999987432 111111 12221 1367778885 87754322111111 1 12356
Q ss_pred HHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHH
Q 010508 204 LYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASR 241 (508)
Q Consensus 204 ~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~ 241 (508)
+.++++..-+++| ..+++++|+|+||..+-.++.+
T Consensus 117 ~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~~ 151 (324)
T PRK10985 117 ARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLAK 151 (324)
T ss_pred HHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHHh
Confidence 5554433223333 4689999999999665444443
No 57
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.23 E-value=1.2e-05 Score=77.05 Aligned_cols=93 Identities=15% Similarity=0.161 Sum_probs=58.1
Q ss_pred CCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccc
Q 010508 169 KASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKE 248 (508)
Q Consensus 169 k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~ 248 (508)
+=..|+.+|..-+.||+..-........-....+|+.++++...++ +....+.+.|+|.||||+.+-.++.+.
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~-~~iD~~ri~i~G~S~GG~~a~~~~~~~------ 85 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQ-YYIDPDRIGIMGHSYGGYLALLAATQH------ 85 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHT-TSEEEEEEEEEEETHHHHHHHHHHHHT------
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhcc-ccccceeEEEEcccccccccchhhccc------
Confidence 3468999999877777664222111122234567888766555444 445567899999999997776665522
Q ss_pred cccceEeeeeeeccCCCCChhhhh
Q 010508 249 KQGIHINLKGFAIGNGLTDPAIQY 272 (508)
Q Consensus 249 ~~~~~inLkGi~IGNg~~dp~~q~ 272 (508)
+-.++.++.++|.+|+...+
T Consensus 86 ----~~~f~a~v~~~g~~d~~~~~ 105 (213)
T PF00326_consen 86 ----PDRFKAAVAGAGVSDLFSYY 105 (213)
T ss_dssp ----CCGSSEEEEESE-SSTTCSB
T ss_pred ----ceeeeeeeccceecchhccc
Confidence 12468889999998876543
No 58
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.22 E-value=6.8e-05 Score=75.24 Aligned_cols=78 Identities=21% Similarity=0.235 Sum_probs=52.6
Q ss_pred ceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccc
Q 010508 171 SNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQ 250 (508)
Q Consensus 171 anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~ 250 (508)
.+++-+|.| |.|.|-... .+.+...+|+.++++.+-+..|.+ .++.++|+|.||..+-.+|. ..
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~-----~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~----~~---- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN-----LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAP----AD---- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC-----CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhh----hC----
Confidence 689999997 999886421 133345677777777554455543 46999999999955444432 11
Q ss_pred cceEeeeeeeccCCCCC
Q 010508 251 GIHINLKGFAIGNGLTD 267 (508)
Q Consensus 251 ~~~inLkGi~IGNg~~d 267 (508)
-.++|+++-||++.
T Consensus 122 ---~~v~~lil~~p~~~ 135 (274)
T TIGR03100 122 ---LRVAGLVLLNPWVR 135 (274)
T ss_pred ---CCccEEEEECCccC
Confidence 25899999888754
No 59
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.20 E-value=6.4e-05 Score=70.74 Aligned_cols=61 Identities=20% Similarity=0.245 Sum_probs=45.7
Q ss_pred cCCceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHH
Q 010508 404 EDGIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKA 483 (508)
Q Consensus 404 ~~girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~ 483 (508)
+...++|+..|+.|.+.+......+.+.+.. ...++++.++||+...++|+.
T Consensus 219 ~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~gH~~~~~~p~~ 270 (282)
T COG0596 219 RITVPTLIIHGEDDPVVPAELARRLAAALPN----------------------------DARLVVIPGAGHFPHLEAPEA 270 (282)
T ss_pred cCCCCeEEEecCCCCcCCHHHHHHHHhhCCC----------------------------CceEEEeCCCCCcchhhcHHH
Confidence 3469999999999966666554455444431 245689999999999999998
Q ss_pred HHHHHHHHH
Q 010508 484 SLQMLQSWM 492 (508)
Q Consensus 484 a~~ml~~fl 492 (508)
..+.+.+|+
T Consensus 271 ~~~~i~~~~ 279 (282)
T COG0596 271 FAAALLAFL 279 (282)
T ss_pred HHHHHHHHH
Confidence 887777754
No 60
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.13 E-value=0.00042 Score=73.27 Aligned_cols=65 Identities=17% Similarity=0.127 Sum_probs=53.4
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcC-CCccCCccChHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHD-AGHMVPMDQPKAS 484 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~-AGHmvP~DqP~~a 484 (508)
..||||..|+.|.++|....++..+.+.=. ..+.++..|.+ +||+++.++|++.
T Consensus 323 ~~PtLvI~G~~D~l~p~~~~~~la~~lp~~-------------------------~~~a~l~~I~s~~GH~~~le~p~~~ 377 (389)
T PRK06765 323 EANVLMIPCKQDLLQPPRYNYKMVDILQKQ-------------------------GKYAEVYEIESINGHMAGVFDIHLF 377 (389)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhhhc-------------------------CCCeEEEEECCCCCcchhhcCHHHH
Confidence 689999999999999988887776665300 02456788985 9999999999999
Q ss_pred HHHHHHHHcCC
Q 010508 485 LQMLQSWMQGK 495 (508)
Q Consensus 485 ~~ml~~fl~g~ 495 (508)
.+.|.+|+..+
T Consensus 378 ~~~I~~FL~~~ 388 (389)
T PRK06765 378 EKKIYEFLNRK 388 (389)
T ss_pred HHHHHHHHccc
Confidence 99999999764
No 61
>PLN02442 S-formylglutathione hydrolase
Probab=97.93 E-value=0.00053 Score=69.27 Aligned_cols=47 Identities=19% Similarity=0.099 Sum_probs=35.4
Q ss_pred CceEEEEeecCcccCchh-hHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCC
Q 010508 406 GIRVLIYAGEYDLICNWL-GNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVP 477 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~-G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP 477 (508)
+.+|||.+|+.|.+|+.. .++.+.+.++=. ..+.++..+.+++|-..
T Consensus 217 ~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~-------------------------g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 217 SATILIDQGEADKFLKEQLLPENFEEACKEA-------------------------GAPVTLRLQPGYDHSYF 264 (283)
T ss_pred CCCEEEEECCCCccccccccHHHHHHHHHHc-------------------------CCCeEEEEeCCCCccHH
Confidence 689999999999999974 466777666311 12467899999999755
No 62
>PLN02872 triacylglycerol lipase
Probab=97.82 E-value=0.00028 Score=74.72 Aligned_cols=61 Identities=8% Similarity=0.153 Sum_probs=49.7
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCcc---CCccChH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHM---VPMDQPK 482 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHm---vP~DqP~ 482 (508)
.++|+|+.|+.|.+++....+++.+.|.= .-.+..++++||+ ...+.|+
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~----------------------------~~~l~~l~~~gH~dfi~~~eape 376 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS----------------------------KPELLYLENYGHIDFLLSTSAKE 376 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC----------------------------ccEEEEcCCCCCHHHHhCcchHH
Confidence 58999999999999999999998888740 0123678999996 4558999
Q ss_pred HHHHHHHHHHcC
Q 010508 483 ASLQMLQSWMQG 494 (508)
Q Consensus 483 ~a~~ml~~fl~g 494 (508)
..++-+.+|++.
T Consensus 377 ~V~~~Il~fL~~ 388 (395)
T PLN02872 377 DVYNHMIQFFRS 388 (395)
T ss_pred HHHHHHHHHHHH
Confidence 999999999864
No 63
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.73 E-value=0.0016 Score=65.36 Aligned_cols=127 Identities=17% Similarity=0.133 Sum_probs=83.2
Q ss_pred CCCccEEEEEEeccCCC-CCCEEEEECCCCCchh-hhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCccc
Q 010508 109 SQSARMFYFFFESRNNK-SDPVVIWLTGGPGCSS-ELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSY 186 (508)
Q Consensus 109 ~~~~~lFy~ffes~~~~-~dPlvlWlnGGPGcSS-~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy 186 (508)
..+..+|.-.....+++ -.-+|+.++|.-+-|| ..--+.. .|..+. .-|.-+|++ |.|.|-
T Consensus 35 ~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~----------~l~~~g------~~v~a~D~~-GhG~Sd 97 (313)
T KOG1455|consen 35 PRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAK----------RLAKSG------FAVYAIDYE-GHGRSD 97 (313)
T ss_pred CCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHH----------HHHhCC------CeEEEeecc-CCCcCC
Confidence 45578888777666553 7778889998765553 2211111 122222 246779996 999997
Q ss_pred ccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCC
Q 010508 187 TSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGL 265 (508)
Q Consensus 187 ~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 265 (508)
+- ..+..+.+.+.+|+..|+..+- ..++++..+.|++|||.|| ++|..+..+. +--..|+++-.|+
T Consensus 98 Gl--~~yi~~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGG----AV~Ll~~~k~------p~~w~G~ilvaPm 163 (313)
T KOG1455|consen 98 GL--HAYVPSFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGG----AVALLIALKD------PNFWDGAILVAPM 163 (313)
T ss_pred CC--cccCCcHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcch----HHHHHHHhhC------Ccccccceeeecc
Confidence 53 4566788888899888776654 4568999999999999999 5555555432 1125566654444
No 64
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.63 E-value=0.0004 Score=69.62 Aligned_cols=130 Identities=14% Similarity=0.052 Sum_probs=80.2
Q ss_pred CCccEEEEEEeccCCCCCCEEEEECCCCC---chh-hhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcc
Q 010508 110 QSARMFYFFFESRNNKSDPVVIWLTGGPG---CSS-ELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFS 185 (508)
Q Consensus 110 ~~~~lFy~ffes~~~~~dPlvlWlnGGPG---cSS-~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfS 185 (508)
...++|.|+++....+..|+||.++|-.+ ++. +...+.+ .|.. .-.+++-+|.| |.|.|
T Consensus 8 ~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~----------~La~------~Gy~Vl~~Dl~-G~G~S 70 (266)
T TIGR03101 8 PHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQAR----------AFAA------GGFGVLQIDLY-GCGDS 70 (266)
T ss_pred CCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHH----------HHHH------CCCEEEEECCC-CCCCC
Confidence 34578898887654445799999998543 111 1111111 1111 23599999998 99988
Q ss_pred cccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCC
Q 010508 186 YTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGL 265 (508)
Q Consensus 186 y~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 265 (508)
-.... + .+.+...+|+..+ .+|+++. ...+++|+|+|+||..+..+|.+.. -.++++++-+|.
T Consensus 71 ~g~~~-~--~~~~~~~~Dv~~a-i~~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~p----------~~v~~lVL~~P~ 133 (266)
T TIGR03101 71 AGDFA-A--ARWDVWKEDVAAA-YRWLIEQ---GHPPVTLWGLRLGALLALDAANPLA----------AKCNRLVLWQPV 133 (266)
T ss_pred CCccc-c--CCHHHHHHHHHHH-HHHHHhc---CCCCEEEEEECHHHHHHHHHHHhCc----------cccceEEEeccc
Confidence 64322 1 2333445666554 3455543 2468999999999988777765431 247888887777
Q ss_pred CChhhhhh
Q 010508 266 TDPAIQYK 273 (508)
Q Consensus 266 ~dp~~q~~ 273 (508)
++.....+
T Consensus 134 ~~g~~~l~ 141 (266)
T TIGR03101 134 VSGKQQLQ 141 (266)
T ss_pred cchHHHHH
Confidence 76554433
No 65
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.52 E-value=0.00012 Score=76.15 Aligned_cols=132 Identities=20% Similarity=0.277 Sum_probs=76.0
Q ss_pred cEEEEEEec--cCCC-CCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccC
Q 010508 113 RMFYFFFES--RNNK-SDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSD 189 (508)
Q Consensus 113 ~lFy~ffes--~~~~-~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~ 189 (508)
.-.||+.++ +++| +|||||+++|| |.+.+.=|+.+.- ..+-|..-+...||.+|-..-. | ...
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG-------GY~l~~~p~qi~~----L~~i~~~l~~~SILvLDYsLt~--~-~~~ 170 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG-------GYFLGTTPSQIEF----LLNIYKLLPEVSILVLDYSLTS--S-DEH 170 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC-------eeEecCCHHHHHH----HHHHHHHcCCCeEEEEeccccc--c-ccC
Confidence 456999995 3345 79999999999 2333333332211 0011111112399999976433 0 001
Q ss_pred CCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChh
Q 010508 190 KDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPA 269 (508)
Q Consensus 190 ~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 269 (508)
+..+++-. .++.+..+...+. -..+++.|+|+|-||+.+-.+.+++.+.++. .. =|.+++-+||+++.
T Consensus 171 ~~~yPtQL----~qlv~~Y~~Lv~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~----~~-Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 171 GHKYPTQL----RQLVATYDYLVES---EGNKNIILMGDSAGGNLALSFLQYLKKPNKL----PY-PKSAILISPWVNLV 238 (374)
T ss_pred CCcCchHH----HHHHHHHHHHHhc---cCCCeEEEEecCccHHHHHHHHHHHhhcCCC----CC-CceeEEECCCcCCc
Confidence 12233211 2222222333322 2346899999999999999999998765432 11 26888889999886
Q ss_pred h
Q 010508 270 I 270 (508)
Q Consensus 270 ~ 270 (508)
.
T Consensus 239 ~ 239 (374)
T PF10340_consen 239 P 239 (374)
T ss_pred C
Confidence 3
No 66
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=97.49 E-value=0.00071 Score=59.88 Aligned_cols=80 Identities=23% Similarity=0.311 Sum_probs=49.7
Q ss_pred EEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHH
Q 010508 129 VVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFL 208 (508)
Q Consensus 129 lvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL 208 (508)
+||+++|+.|.+.....+.+ .+... -.+++.+|.| |.|.+... ...+++++.+
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~----------~l~~~------G~~v~~~~~~-~~~~~~~~----------~~~~~~~~~~ 53 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAE----------ALAEQ------GYAVVAFDYP-GHGDSDGA----------DAVERVLADI 53 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHH----------HHHHT------TEEEEEESCT-TSTTSHHS----------HHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHH----------HHHHC------CCEEEEEecC-CCCccchh----------HHHHHHHHHH
Confidence 68999999887665544443 22222 2588899987 76665211 1233333333
Q ss_pred HHHHHhCCCCCCCCEEEEcccccccchHHHHH
Q 010508 209 QAFFAEHPQYAKNDFYITGESYAGHYIPAFAS 240 (508)
Q Consensus 209 ~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~ 240 (508)
. +..+ ..++++|+|+|.||..+..++.
T Consensus 54 ~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 54 R---AGYP--DPDRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp H---HHHC--TCCEEEEEEETHHHHHHHHHHH
T ss_pred H---hhcC--CCCcEEEEEEccCcHHHHHHhh
Confidence 2 3333 5678999999999976666665
No 67
>PRK11460 putative hydrolase; Provisional
Probab=97.43 E-value=0.0027 Score=62.17 Aligned_cols=62 Identities=18% Similarity=0.121 Sum_probs=46.2
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
+.+||+.+|+.|.++|+...++..+.|+=. ..+.++.++.++||.+..+.-+.+.
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~-------------------------g~~~~~~~~~~~gH~i~~~~~~~~~ 202 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISL-------------------------GGDVTLDIVEDLGHAIDPRLMQFAL 202 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHC-------------------------CCCeEEEEECCCCCCCCHHHHHHHH
Confidence 469999999999999999999888887411 1246678889999999755555555
Q ss_pred HHHHHHH
Q 010508 486 QMLQSWM 492 (508)
Q Consensus 486 ~ml~~fl 492 (508)
+.|++++
T Consensus 203 ~~l~~~l 209 (232)
T PRK11460 203 DRLRYTV 209 (232)
T ss_pred HHHHHHc
Confidence 5554444
No 68
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.22 E-value=0.01 Score=60.30 Aligned_cols=62 Identities=13% Similarity=0.192 Sum_probs=47.6
Q ss_pred cCCceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHH
Q 010508 404 EDGIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKA 483 (508)
Q Consensus 404 ~~girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~ 483 (508)
....+||+..|..+--++.....+..+.. .+..+..+.+|||+|..|+|+.
T Consensus 251 ~~~~pvlfi~g~~S~fv~~~~~~~~~~~f-----------------------------p~~e~~~ld~aGHwVh~E~P~~ 301 (315)
T KOG2382|consen 251 PYTGPVLFIKGLQSKFVPDEHYPRMEKIF-----------------------------PNVEVHELDEAGHWVHLEKPEE 301 (315)
T ss_pred ccccceeEEecCCCCCcChhHHHHHHHhc-----------------------------cchheeecccCCceeecCCHHH
Confidence 34579999999999888876655444332 2344577888999999999999
Q ss_pred HHHHHHHHHcC
Q 010508 484 SLQMLQSWMQG 494 (508)
Q Consensus 484 a~~ml~~fl~g 494 (508)
..+.|..|+.-
T Consensus 302 ~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 302 FIESISEFLEE 312 (315)
T ss_pred HHHHHHHHhcc
Confidence 99999998853
No 69
>PRK11071 esterase YqiA; Provisional
Probab=97.17 E-value=0.0061 Score=57.86 Aligned_cols=54 Identities=6% Similarity=0.002 Sum_probs=44.2
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
..+|+|.+|+.|-++|+..+.+..++. ....++||+|.- ...+..+
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~~--------------------------------~~~~~~ggdH~f--~~~~~~~ 181 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAAC--------------------------------RQTVEEGGNHAF--VGFERYF 181 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHhc--------------------------------ceEEECCCCcch--hhHHHhH
Confidence 578999999999999999998877642 125789999998 3448899
Q ss_pred HHHHHHHc
Q 010508 486 QMLQSWMQ 493 (508)
Q Consensus 486 ~ml~~fl~ 493 (508)
+.+..|++
T Consensus 182 ~~i~~fl~ 189 (190)
T PRK11071 182 NQIVDFLG 189 (190)
T ss_pred HHHHHHhc
Confidence 99999874
No 70
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.07 E-value=0.0021 Score=61.78 Aligned_cols=29 Identities=14% Similarity=-0.086 Sum_probs=24.7
Q ss_pred ceEEEEeecCcccCchhhHHHHHhccccc
Q 010508 407 IRVLIYAGEYDLICNWLGNSKWVHAMEWS 435 (508)
Q Consensus 407 irVLIY~Gd~D~i~n~~G~~~wi~~L~W~ 435 (508)
-+++|.+|+.|.+||....+...+.|+.-
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 35789999999999999999998887643
No 71
>PRK10115 protease 2; Provisional
Probab=97.01 E-value=0.017 Score=65.54 Aligned_cols=136 Identities=13% Similarity=0.123 Sum_probs=74.3
Q ss_pred CCCccEEEEEEeccC---CCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcc
Q 010508 109 SQSARMFYFFFESRN---NKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFS 185 (508)
Q Consensus 109 ~~~~~lFy~ffes~~---~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfS 185 (508)
..+..+-.|++-... +...|+||+.+||||.+..-++..+. ..|...-=++.+=.+.|.| .
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~---------------~~l~~rG~~v~~~n~RGs~-g 487 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSR---------------LSLLDRGFVYAIVHVRGGG-E 487 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHH---------------HHHHHCCcEEEEEEcCCCC-c
Confidence 344566666654332 22679999999999998532221111 1233333333333455543 2
Q ss_pred cccC--CCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccC
Q 010508 186 YTSD--KDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGN 263 (508)
Q Consensus 186 y~~~--~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGN 263 (508)
|+.. ..+....-...-+|+.++.+.. .+..--....+.|.|-||||. ++..++.+. +-.++.++.++
T Consensus 488 ~G~~w~~~g~~~~k~~~~~D~~a~~~~L-v~~g~~d~~rl~i~G~S~GG~----l~~~~~~~~------Pdlf~A~v~~v 556 (686)
T PRK10115 488 LGQQWYEDGKFLKKKNTFNDYLDACDAL-LKLGYGSPSLCYGMGGSAGGM----LMGVAINQR------PELFHGVIAQV 556 (686)
T ss_pred cCHHHHHhhhhhcCCCcHHHHHHHHHHH-HHcCCCChHHeEEEEECHHHH----HHHHHHhcC------hhheeEEEecC
Confidence 3211 0100001112456777766544 443333456799999999994 444443321 23589999999
Q ss_pred CCCChhhh
Q 010508 264 GLTDPAIQ 271 (508)
Q Consensus 264 g~~dp~~q 271 (508)
|++|....
T Consensus 557 p~~D~~~~ 564 (686)
T PRK10115 557 PFVDVVTT 564 (686)
T ss_pred CchhHhhh
Confidence 99986543
No 72
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=96.87 E-value=0.0073 Score=60.57 Aligned_cols=49 Identities=20% Similarity=0.157 Sum_probs=35.0
Q ss_pred CceEEEEeecCcccCch-hhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCcc
Q 010508 406 GIRVLIYAGEYDLICNW-LGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMD 479 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~-~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~D 479 (508)
..+++|.+|+.|..++. .....+.+.|+=.| .+.++.++.|+||--...
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g-------------------------~~v~~~~~~g~~H~f~~~ 260 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRAAG-------------------------QALTLRRQAGYDHSYYFI 260 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHHcC-------------------------CCeEEEEeCCCCccchhH
Confidence 35899999999999998 45556666664111 246778899999976544
No 73
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=96.76 E-value=0.076 Score=58.39 Aligned_cols=85 Identities=9% Similarity=0.068 Sum_probs=49.3
Q ss_pred ceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccc
Q 010508 171 SNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQ 250 (508)
Q Consensus 171 anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~ 250 (508)
..|+-||-+ |.|.|... ... ++-+.+++.++|..+.+. ....++.++|+|.||..+......+....
T Consensus 221 f~V~~iDwr-gpg~s~~~----~~~-ddY~~~~i~~al~~v~~~---~g~~kv~lvG~cmGGtl~a~ala~~aa~~---- 287 (532)
T TIGR01838 221 HTVFVISWR-NPDASQAD----KTF-DDYIRDGVIAALEVVEAI---TGEKQVNCVGYCIGGTLLSTALAYLAARG---- 287 (532)
T ss_pred cEEEEEECC-CCCccccc----CCh-hhhHHHHHHHHHHHHHHh---cCCCCeEEEEECcCcHHHHHHHHHHHHhC----
Confidence 478889975 88876432 111 122334466666655543 34568999999999987654332222211
Q ss_pred cceEeeeeeeccCCCCChh
Q 010508 251 GIHINLKGFAIGNGLTDPA 269 (508)
Q Consensus 251 ~~~inLkGi~IGNg~~dp~ 269 (508)
..-.++++++-+..+|..
T Consensus 288 -~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 288 -DDKRIKSATFFTTLLDFS 305 (532)
T ss_pred -CCCccceEEEEecCcCCC
Confidence 011477777766666644
No 74
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=96.65 E-value=0.04 Score=57.14 Aligned_cols=61 Identities=16% Similarity=0.146 Sum_probs=46.2
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccCh---H
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQP---K 482 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP---~ 482 (508)
..+||+.+|+.|.++++..++.+.+.+. + ...++.++ .+||+.+.+.| +
T Consensus 286 ~~Pvliv~G~~D~i~~~~~~~~~~~~~~--~-------------------------~~~~~~~~-~~gH~~~~~~~~~~~ 337 (350)
T TIGR01836 286 KMPILNIYAERDHLVPPDASKALNDLVS--S-------------------------EDYTELSF-PGGHIGIYVSGKAQK 337 (350)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHcC--C-------------------------CCeEEEEc-CCCCEEEEECchhHh
Confidence 6899999999999999999988887763 1 12233444 58999988866 5
Q ss_pred HHHHHHHHHHcC
Q 010508 483 ASLQMLQSWMQG 494 (508)
Q Consensus 483 ~a~~ml~~fl~g 494 (508)
.+..-+.+|+..
T Consensus 338 ~v~~~i~~wl~~ 349 (350)
T TIGR01836 338 EVPPAIGKWLQA 349 (350)
T ss_pred hhhHHHHHHHHh
Confidence 667777788754
No 75
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.45 E-value=0.0057 Score=60.73 Aligned_cols=88 Identities=27% Similarity=0.452 Sum_probs=62.5
Q ss_pred CCCCEEEEECCCCCchhh-hhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHH
Q 010508 125 KSDPVVIWLTGGPGCSSE-LALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSND 203 (508)
Q Consensus 125 ~~dPlvlWlnGGPGcSS~-~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d 203 (508)
+.-|+++.++|| |.|.+ .+.|.- .+..+- ..-++-+|. +|.|-|-.+++.+ .+.+..++|
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~----------el~s~~-----~~r~~a~Dl-RgHGeTk~~~e~d--lS~eT~~KD 132 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFAS----------ELKSKI-----RCRCLALDL-RGHGETKVENEDD--LSLETMSKD 132 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHH----------HHHhhc-----ceeEEEeec-cccCccccCChhh--cCHHHHHHH
Confidence 478999999998 66665 344421 111110 123477997 7999999887766 466778999
Q ss_pred HHHHHHHHHHhCCCCCCCCEEEEcccccccch
Q 010508 204 LYDFLQAFFAEHPQYAKNDFYITGESYAGHYI 235 (508)
Q Consensus 204 ~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yv 235 (508)
+-..++.+|..-| .++.|.|||.||-..
T Consensus 133 ~~~~i~~~fge~~----~~iilVGHSmGGaIa 160 (343)
T KOG2564|consen 133 FGAVIKELFGELP----PQIILVGHSMGGAIA 160 (343)
T ss_pred HHHHHHHHhccCC----CceEEEeccccchhh
Confidence 9999999986543 269999999999554
No 76
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.42 E-value=0.038 Score=57.21 Aligned_cols=126 Identities=13% Similarity=0.154 Sum_probs=75.3
Q ss_pred CCCccEEEEEEeccCCC---CCCEEEEECCCCCchhh--h----hhh----hcCCCeEEeCCCcccccCCCCCCCceEEE
Q 010508 109 SQSARMFYFFFESRNNK---SDPVVIWLTGGPGCSSE--L----ALF----YENGPFHIANNLSLVWNDYGWDKASNLLF 175 (508)
Q Consensus 109 ~~~~~lFy~ffes~~~~---~dPlvlWlnGGPGcSS~--~----glf----~E~GP~~i~~~~~l~~N~~sW~k~anvLy 175 (508)
+....++-+.|.....+ .+|+|||++||--|-+. . .++ .+.+=..+..+.+|.+
T Consensus 69 ~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAP------------- 135 (336)
T KOG1515|consen 69 DPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAP------------- 135 (336)
T ss_pred cCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCC-------------
Confidence 45578999999876532 89999999999877321 1 111 1222222233333332
Q ss_pred EeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHH-HHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceE
Q 010508 176 VDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQA-FFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHI 254 (508)
Q Consensus 176 iDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~-F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~i 254 (508)
+..++..-++.-+.+..++.+ |.+.+-.++ .++|+|.|-||..+-.+|.++.+.. -..+
T Consensus 136 --------------Eh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~----~~~~ 195 (336)
T KOG1515|consen 136 --------------EHPFPAAYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK----LSKP 195 (336)
T ss_pred --------------CCCCCccchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc----CCCc
Confidence 111221111112223333443 666554444 3999999999999999999998742 1357
Q ss_pred eeeeeeccCCCCC
Q 010508 255 NLKGFAIGNGLTD 267 (508)
Q Consensus 255 nLkGi~IGNg~~d 267 (508)
.|+|.++--|++.
T Consensus 196 ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 196 KIKGQILIYPFFQ 208 (336)
T ss_pred ceEEEEEEecccC
Confidence 8999998666554
No 77
>COG0400 Predicted esterase [General function prediction only]
Probab=96.33 E-value=0.055 Score=52.23 Aligned_cols=59 Identities=20% Similarity=0.344 Sum_probs=43.7
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
+.|||+.+|..|-+||...+++..+.|.=.| .+..+.++. .||.++.+ .+
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g-------------------------~~v~~~~~~-~GH~i~~e----~~ 195 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTASG-------------------------ADVEVRWHE-GGHEIPPE----EL 195 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHcC-------------------------CCEEEEEec-CCCcCCHH----HH
Confidence 6899999999999999999999888875222 234445555 99999865 44
Q ss_pred HHHHHHHcC
Q 010508 486 QMLQSWMQG 494 (508)
Q Consensus 486 ~ml~~fl~g 494 (508)
+.+++|+.+
T Consensus 196 ~~~~~wl~~ 204 (207)
T COG0400 196 EAARSWLAN 204 (207)
T ss_pred HHHHHHHHh
Confidence 555556654
No 78
>PRK13604 luxD acyl transferase; Provisional
Probab=96.32 E-value=0.45 Score=48.63 Aligned_cols=59 Identities=8% Similarity=0.053 Sum_probs=45.2
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
+.+|||++|+.|..||..+++++.++++- ++-.+..+.||+|... ..+....
T Consensus 202 ~~PvLiIHG~~D~lVp~~~s~~l~e~~~s---------------------------~~kkl~~i~Ga~H~l~-~~~~~~~ 253 (307)
T PRK13604 202 DIPFIAFTANNDSWVKQSEVIDLLDSIRS---------------------------EQCKLYSLIGSSHDLG-ENLVVLR 253 (307)
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHhcc---------------------------CCcEEEEeCCCccccC-cchHHHH
Confidence 58999999999999999999999987631 2345689999999974 4555555
Q ss_pred HHHHHHH
Q 010508 486 QMLQSWM 492 (508)
Q Consensus 486 ~ml~~fl 492 (508)
.+.++-.
T Consensus 254 ~~~~~~~ 260 (307)
T PRK13604 254 NFYQSVT 260 (307)
T ss_pred HHHHHHH
Confidence 5555544
No 79
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.06 E-value=0.038 Score=61.14 Aligned_cols=130 Identities=17% Similarity=0.118 Sum_probs=77.1
Q ss_pred CCccEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccC
Q 010508 110 QSARMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSD 189 (508)
Q Consensus 110 ~~~~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~ 189 (508)
.+.+|+..++.-......|+||.++|-...+.....+ + ......+.. +-..++-+|.+ |+|.|-+..
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~-~-----~~~~~~l~~------~Gy~vv~~D~R-G~g~S~g~~ 71 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGL-D-----KTEPAWFVA------QGYAVVIQDTR-GRGASEGEF 71 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhcccc-c-----cccHHHHHh------CCcEEEEEecc-ccccCCCce
Confidence 3457877776544334789999999753322110000 0 000001111 34689999985 999997642
Q ss_pred CCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCCh
Q 010508 190 KDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDP 268 (508)
Q Consensus 190 ~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp 268 (508)
.. .+ ...++|+.++++ |+.+.|. ...++.++|+||||...-.+|..- +-.||+++..++..|.
T Consensus 72 ~~---~~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~----------~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 72 DL---LG-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQ----------PPALRAIAPQEGVWDL 134 (550)
T ss_pred Ee---cC-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhccC----------CCceeEEeecCcccch
Confidence 21 11 345678877554 7776653 346899999999996544444321 1258999988877653
No 80
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.04 E-value=0.18 Score=51.15 Aligned_cols=65 Identities=22% Similarity=0.315 Sum_probs=49.7
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEe-cCeEEEEEcCCCccCC--ccChH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSH-GPLTFLKVHDAGHMVP--MDQPK 482 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~-~~Ltf~~V~~AGHmvP--~DqP~ 482 (508)
..+|+||+|..|.++|+..+.+.++.+- +.. .+++|.++.+++|+.. ...|.
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c-------------------------~~G~a~V~~~~~~~~~H~~~~~~~~~~ 273 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWC-------------------------AAGGADVEYVRYPGGGHLGAAFASAPD 273 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHH-------------------------HcCCCCEEEEecCCCChhhhhhcCcHH
Confidence 5899999999999999999999998864 122 2688999999999965 46666
Q ss_pred HHHHHHHHHHcCCc
Q 010508 483 ASLQMLQSWMQGKL 496 (508)
Q Consensus 483 ~a~~ml~~fl~g~~ 496 (508)
+. .-|++-+.|++
T Consensus 274 a~-~Wl~~rf~G~~ 286 (290)
T PF03583_consen 274 AL-AWLDDRFAGKP 286 (290)
T ss_pred HH-HHHHHHHCCCC
Confidence 54 44455555654
No 81
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.96 E-value=0.013 Score=58.95 Aligned_cols=110 Identities=17% Similarity=0.205 Sum_probs=64.6
Q ss_pred CCCCCEEEEECCCCCch-hhh-hhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhH
Q 010508 124 NKSDPVVIWLTGGPGCS-SEL-ALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVS 201 (508)
Q Consensus 124 ~~~dPlvlWlnGGPGcS-S~~-glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a 201 (508)
+++.|++|+++|-.|.. ... ..+. +.+.-.+..|||.||-+.+..-.|.. ...+...++
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~---------------~~ll~~~~~nVi~vD~~~~~~~~y~~----a~~~~~~v~ 93 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLR---------------KAYLSRGDYNVIVVDWGRGANPNYPQ----AVNNTRVVG 93 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHH---------------HHHHhcCCCEEEEEECccccccChHH----HHHhHHHHH
Confidence 34789999999977654 111 0000 00000134799999987442212211 112334456
Q ss_pred HHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccC
Q 010508 202 NDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGN 263 (508)
Q Consensus 202 ~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGN 263 (508)
+++-++|+...+.. .+...+++|+|+|+||+.+-.+|.++.+ +++.|+.-+
T Consensus 94 ~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~----------~v~~iv~LD 144 (275)
T cd00707 94 AELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG----------KLGRITGLD 144 (275)
T ss_pred HHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC----------ccceeEEec
Confidence 67777666554432 2345689999999999998888876532 366666633
No 82
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=95.94 E-value=0.11 Score=59.54 Aligned_cols=115 Identities=18% Similarity=0.246 Sum_probs=69.7
Q ss_pred ccEEEEEEeccC-CC--CCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCC-ceEEEEeCCCCCCcccc
Q 010508 112 ARMFYFFFESRN-NK--SDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKA-SNLLFVDQPTGTGFSYT 187 (508)
Q Consensus 112 ~~lFy~ffes~~-~~--~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~-anvLyiDqPvGtGfSy~ 187 (508)
-..++++.-..+ ++ +-||+++..||||.-+..+. ..+.+|.+.+.+. +-|+.|| ++|+|+.=.
T Consensus 508 ~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~------------~~~~~~~~~~s~~g~~v~~vd-~RGs~~~G~ 574 (755)
T KOG2100|consen 508 ITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSK------------FSVDWNEVVVSSRGFAVLQVD-GRGSGGYGW 574 (755)
T ss_pred EEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeee------------EEecHHHHhhccCCeEEEEEc-CCCcCCcch
Confidence 355666665543 22 78999999999994321111 2344555544433 4677788 589997532
Q ss_pred cCCCCCCCCh-hhhHHHHHHHHHHHHHhCCCCCC-CCEEEEcccccccchHHHHHHHHhc
Q 010508 188 SDKDDIRHDE-EGVSNDLYDFLQAFFAEHPQYAK-NDFYITGESYAGHYIPAFASRVHKG 245 (508)
Q Consensus 188 ~~~~~~~~~~-~~~a~d~~~fL~~F~~~~Pe~~~-~~~yI~GESYgG~yvP~lA~~i~~~ 245 (508)
.-...+..+. +.-.+|.....+.+.+.+ |.. ..+.|+|.|||| +++..++.+
T Consensus 575 ~~~~~~~~~lG~~ev~D~~~~~~~~~~~~--~iD~~ri~i~GwSyGG----y~t~~~l~~ 628 (755)
T KOG2100|consen 575 DFRSALPRNLGDVEVKDQIEAVKKVLKLP--FIDRSRVAIWGWSYGG----YLTLKLLES 628 (755)
T ss_pred hHHHHhhhhcCCcchHHHHHHHHHHHhcc--cccHHHeEEeccChHH----HHHHHHhhh
Confidence 2111111121 113467777677666665 544 569999999999 777777765
No 83
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=95.92 E-value=0.11 Score=59.65 Aligned_cols=90 Identities=18% Similarity=0.211 Sum_probs=56.0
Q ss_pred cCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCC--------------CCCCCCEEEEcc
Q 010508 163 NDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHP--------------QYAKNDFYITGE 228 (508)
Q Consensus 163 N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~P--------------e~~~~~~yI~GE 228 (508)
+.|=-..=.+|+++|. +|+|-|-+.-.. .+.+ -.+|.++ +.+|+.... .+-+-++-++|.
T Consensus 272 ~~~~~~rGYaVV~~D~-RGtg~SeG~~~~---~~~~-E~~D~~~-vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~ 345 (767)
T PRK05371 272 NDYFLPRGFAVVYVSG-IGTRGSDGCPTT---GDYQ-EIESMKA-VIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGK 345 (767)
T ss_pred HHHHHhCCeEEEEEcC-CCCCCCCCcCcc---CCHH-HHHHHHH-HHHHHhhCCccccccccccccccCCCCCeeEEEEE
Confidence 3333344569999997 599999875321 1122 3456655 445776421 122458999999
Q ss_pred cccccchHHHHHHHHhcccccccceEeeeeeeccCCCCCh
Q 010508 229 SYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDP 268 (508)
Q Consensus 229 SYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp 268 (508)
||+|...-.+|..-. -.||.|+-..|+.+.
T Consensus 346 SY~G~~~~~aAa~~p----------p~LkAIVp~a~is~~ 375 (767)
T PRK05371 346 SYLGTLPNAVATTGV----------EGLETIIPEAAISSW 375 (767)
T ss_pred cHHHHHHHHHHhhCC----------CcceEEEeeCCCCcH
Confidence 999966555554322 248999987777663
No 84
>PLN00021 chlorophyllase
Probab=95.73 E-value=0.027 Score=57.91 Aligned_cols=112 Identities=13% Similarity=0.118 Sum_probs=61.6
Q ss_pred CCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHH
Q 010508 125 KSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDL 204 (508)
Q Consensus 125 ~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~ 204 (508)
.+.|+||+++|+.+......-+.+ .|. +| -..|+.+|.+ | ++.... ..+-+.+.++
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~----------~La----s~--G~~VvapD~~-g--~~~~~~-----~~~i~d~~~~ 105 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQ----------HIA----SH--GFIVVAPQLY-T--LAGPDG-----TDEIKDAAAV 105 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHH----------HHH----hC--CCEEEEecCC-C--cCCCCc-----hhhHHHHHHH
Confidence 378999999999776543322222 111 11 1467888876 3 221111 1111224455
Q ss_pred HHHHHHHHHh-CC---CCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCC
Q 010508 205 YDFLQAFFAE-HP---QYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGL 265 (508)
Q Consensus 205 ~~fL~~F~~~-~P---e~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 265 (508)
.++|.+-++. .| +...++++|+|+|+||..+-.+|.+..+.. ....+++++.-+++
T Consensus 106 ~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-----~~~~v~ali~ldPv 165 (313)
T PLN00021 106 INWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS-----LPLKFSALIGLDPV 165 (313)
T ss_pred HHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc-----cccceeeEEeeccc
Confidence 5555543332 12 233467999999999988777776554321 12457777765554
No 85
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=95.72 E-value=0.037 Score=59.34 Aligned_cols=103 Identities=17% Similarity=0.131 Sum_probs=59.0
Q ss_pred CCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHH
Q 010508 124 NKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSND 203 (508)
Q Consensus 124 ~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d 203 (508)
+++.|++|.++|-.+.........+ +...-+.-....|||-+|-| |.|-|.-... ..+...++++
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~-----------l~~al~~~~~d~nVI~VDw~-g~g~s~y~~a---~~~t~~vg~~ 102 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPK-----------LVAALYEREPSANVIVVDWL-SRAQQHYPTS---AAYTKLVGKD 102 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHH-----------HHHHHHhccCCCEEEEEECC-CcCCCCCccc---cccHHHHHHH
Confidence 4578999999997643211000000 11000011124799999998 5554421111 1233567777
Q ss_pred HHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHH
Q 010508 204 LYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRV 242 (508)
Q Consensus 204 ~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i 242 (508)
+.++|+...... .+.-.+++|.|+|.|||.+-.+|.+.
T Consensus 103 la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~ 140 (442)
T TIGR03230 103 VAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLT 140 (442)
T ss_pred HHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhC
Confidence 777766443332 35557899999999999887777543
No 86
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.71 E-value=0.14 Score=50.12 Aligned_cols=59 Identities=22% Similarity=0.324 Sum_probs=48.7
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
..+|.++.|+.|.+|.+.-...|-+..+ . .++ +.+...|||-+.+|.+...
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~----~------------------------~f~-l~~fdGgHFfl~~~~~~v~ 226 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK----G------------------------DFT-LRVFDGGHFFLNQQREEVL 226 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc----C------------------------Cce-EEEecCcceehhhhHHHHH
Confidence 5899999999999999999888876542 1 222 6677889999999999999
Q ss_pred HHHHHHHc
Q 010508 486 QMLQSWMQ 493 (508)
Q Consensus 486 ~ml~~fl~ 493 (508)
..|.+.+.
T Consensus 227 ~~i~~~l~ 234 (244)
T COG3208 227 ARLEQHLA 234 (244)
T ss_pred HHHHHHhh
Confidence 99988884
No 87
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=95.48 E-value=0.1 Score=52.35 Aligned_cols=111 Identities=15% Similarity=0.266 Sum_probs=70.7
Q ss_pred CCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCC-----CCCCCChhhhH
Q 010508 127 DPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDK-----DDIRHDEEGVS 201 (508)
Q Consensus 127 dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~-----~~~~~~~~~~a 201 (508)
+++++|+-|-||.-...--|.+ .|..+- +....|+=+.. .|+|..... +.-..+.++..
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~----------~L~~~l---~~~~~i~~ish---~Gh~~~~~~~~~~~~~~~~sL~~QI 65 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLS----------ALYEKL---NPQFEILGISH---AGHSTSPSNSKFSPNGRLFSLQDQI 65 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHH----------HHHHhC---CCCCeeEEecC---CCCcCCcccccccCCCCccCHHHHH
Confidence 5799999999999886554543 222221 44556666665 244443332 22335666667
Q ss_pred HHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeec
Q 010508 202 NDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAI 261 (508)
Q Consensus 202 ~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~I 261 (508)
+.-++||+++....+ -.+.+++|.|||-|+ +++.+++++.. ....++++++.
T Consensus 66 ~hk~~~i~~~~~~~~-~~~~~liLiGHSIGa----yi~levl~r~~---~~~~~V~~~~l 117 (266)
T PF10230_consen 66 EHKIDFIKELIPQKN-KPNVKLILIGHSIGA----YIALEVLKRLP---DLKFRVKKVIL 117 (266)
T ss_pred HHHHHHHHHHhhhhc-CCCCcEEEEeCcHHH----HHHHHHHHhcc---ccCCceeEEEE
Confidence 888899999987653 246789999999998 66666666543 12345555554
No 88
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=95.34 E-value=0.039 Score=58.29 Aligned_cols=108 Identities=25% Similarity=0.273 Sum_probs=63.6
Q ss_pred CCCCEEEEECCCCCchhh-hhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHH
Q 010508 125 KSDPVVIWLTGGPGCSSE-LALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSND 203 (508)
Q Consensus 125 ~~dPlvlWlnGGPGcSS~-~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d 203 (508)
...|+||-..|-=+.-.. ..+|.+ .+.+ .=.+||=||-| |||+|.... .+.| .+.
T Consensus 188 ~p~P~VIv~gGlDs~qeD~~~l~~~----------~l~~------rGiA~LtvDmP-G~G~s~~~~---l~~D----~~~ 243 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDLYRLFRD----------YLAP------RGIAMLTVDMP-GQGESPKWP---LTQD----SSR 243 (411)
T ss_dssp S-EEEEEEE--TTS-GGGGHHHHHC----------CCHH------CT-EEEEE--T-TSGGGTTT----S-S-----CCH
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHH----------HHHh------CCCEEEEEccC-CCcccccCC---CCcC----HHH
Confidence 367988886665444332 334433 1222 22489999999 999985321 2212 235
Q ss_pred HHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCC
Q 010508 204 LYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLT 266 (508)
Q Consensus 204 ~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~ 266 (508)
++..+.+|+...|+.-...+.++|-|.||.|++.+|.-=.+ .|||++.-.|.+
T Consensus 244 l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~----------RlkavV~~Ga~v 296 (411)
T PF06500_consen 244 LHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP----------RLKAVVALGAPV 296 (411)
T ss_dssp HHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT----------T-SEEEEES---
T ss_pred HHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc----------ceeeEeeeCchH
Confidence 66778888888999988999999999999998888753222 378866433333
No 89
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.33 E-value=0.47 Score=51.63 Aligned_cols=257 Identities=17% Similarity=0.249 Sum_probs=134.3
Q ss_pred HHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChhhhhhhHHHHH---h--
Q 010508 206 DFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAIQYKEYTEYA---L-- 280 (508)
Q Consensus 206 ~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a---~-- 280 (508)
+.++.||.+-|++ =|..|.|=||+=.-..|+|..+ .+.||+.|.|-++............ .
T Consensus 104 ~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~----------dfDGIlAgaPA~~~~~~~~~~~~~~~~~~~~ 169 (474)
T PF07519_consen 104 ALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPE----------DFDGILAGAPAINWTHLQLAHAWPAQVMYPD 169 (474)
T ss_pred HHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChh----------hcCeEEeCCchHHHHHHHHHhhhhhhhhccC
Confidence 3467888887765 7999999999999999998866 3899999999987644322211111 1
Q ss_pred hhcccchhhHHHHHHh-hhhhHHH----------HHhhcCCC---CCcccch---HHHHH-----HHHHHHHh----hcC
Q 010508 281 NMRLIKQSDYESINKL-IPTCEHA----------IKTCESDG---GDACSSS---YAVCN-----SIFNKILG----IAG 334 (508)
Q Consensus 281 ~~glI~~~~~~~i~~~-~~~c~~~----------i~~c~~~~---~~~c~~a---~~~c~-----~i~~~i~~----~~g 334 (508)
....++..+++.+.+. +.+|... ...|..+- ...|... ...|- ++++.++. ..|
T Consensus 170 ~~~~~~~~~~~~i~~avl~~CD~lDGv~DGiIs~p~~C~fdp~~~~l~C~~~~~~~~~CLT~~q~~~~~~i~~g~~~~~G 249 (474)
T PF07519_consen 170 PGGYLSPCKLDLIHAAVLAACDALDGVKDGIISDPDACRFDPAGKSLQCKGGQSDTSTCLTAAQAAAVRKIYSGPRNSDG 249 (474)
T ss_pred CCCCCCHHHHHHHHHHHHHhccccCCccCCeecCHHHcCCCCCCCeeeCCCCCCCCCcccCHHHHHHHHHHHhCccCCCC
Confidence 1356777777776543 4455422 24555442 2244321 12332 22233332 112
Q ss_pred CCccccccccc-----------------CCC-CC------CCchHHHHHhChHHHHHHhCCCcccccccchhh--Hhh--
Q 010508 335 DVNYYDIRKKC-----------------EGD-LC------YDFSNMERFLNEKSVREALGVGDIDFVSCSSTV--YEA-- 386 (508)
Q Consensus 335 ~~N~Ydir~~c-----------------~~~-~c------~~~~~~~~yLN~~~Vr~AL~v~~~~~~~cs~~V--~~~-- 386 (508)
..-++-..... .+. .| +....+..++-...++... ..+..|..-.... +..
T Consensus 250 ~~~~~g~~~~~~~~~~~G~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~d~~~d~~~~~~~~~~~~~ 328 (474)
T PF07519_consen 250 ERLYPGFPPGGSETDWFGSEPGGWSSWLTGSPATDGAPFPYAFDWIRYFVFGNGFLYFF-VRDPNFDWDTFDFDDFADRF 328 (474)
T ss_pred CEeccCCCCCcccccccccccCcccceecCCcccCCCcccchhHHHHHHHhccchhhcc-cCCCCCCcccCChhhhhhhh
Confidence 11111110000 000 00 0011111122111111111 1223333222111 111
Q ss_pred ---hh--cccccccccchhhhhcCCceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEe
Q 010508 387 ---ML--MDWMRNFEVGIPTLLEDGIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSH 461 (508)
Q Consensus 387 ---~~--~D~~~~~~~~i~~LL~~girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~ 461 (508)
+. ..........|...-++|=|+|+|+|..|.+++..++.++.+++.=.-. .+ ..++.
T Consensus 329 ~~~~~~~~~~~~a~~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g----~~-------~~~v~------ 391 (474)
T PF07519_consen 329 AQSLQEYSSIIDATDPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMG----GA-------LADVD------ 391 (474)
T ss_pred hhhhhhcccccCCCCcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcc----cc-------ccccc------
Confidence 11 1122223344566667899999999999999999999999888742110 00 00011
Q ss_pred cCeEEEEEcCCCccC--CccChHHHHHHHHHHHcC
Q 010508 462 GPLTFLKVHDAGHMV--PMDQPKASLQMLQSWMQG 494 (508)
Q Consensus 462 ~~Ltf~~V~~AGHmv--P~DqP~~a~~ml~~fl~g 494 (508)
+=+-|..|+|.||-. |-..|-.++..|.+|+.+
T Consensus 392 dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 392 DFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred ceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 113468999999985 334666788899999954
No 90
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.20 E-value=0.044 Score=52.62 Aligned_cols=100 Identities=15% Similarity=0.272 Sum_probs=63.8
Q ss_pred EEEEECCCCCchhhh-hhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHH
Q 010508 129 VVIWLTGGPGCSSEL-ALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDF 207 (508)
Q Consensus 129 lvlWlnGGPGcSS~~-glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~f 207 (508)
-|+++.+|=|.++.. .+...+++ + ..+|..|+.| |.+ .......+-++.|++..+.
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~----------------~-~~~v~~i~~~-~~~-----~~~~~~~si~~la~~y~~~ 58 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPD----------------D-VIGVYGIEYP-GRG-----DDEPPPDSIEELASRYAEA 58 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTT----------------T-EEEEEEECST-TSC-----TTSHEESSHHHHHHHHHHH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCC----------------C-eEEEEEEecC-CCC-----CCCCCCCCHHHHHHHHHHH
Confidence 478888888875543 22222111 0 3678999988 655 1112334566677776665
Q ss_pred HHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCC
Q 010508 208 LQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNG 264 (508)
Q Consensus 208 L~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg 264 (508)
|+ ...|+ .|++|+|+|+||..+=.+|+++.+.. ...+.+++-++
T Consensus 59 I~---~~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G-------~~v~~l~liD~ 102 (229)
T PF00975_consen 59 IR---ARQPE---GPYVLAGWSFGGILAFEMARQLEEAG-------EEVSRLILIDS 102 (229)
T ss_dssp HH---HHTSS---SSEEEEEETHHHHHHHHHHHHHHHTT--------SESEEEEESC
T ss_pred hh---hhCCC---CCeeehccCccHHHHHHHHHHHHHhh-------hccCceEEecC
Confidence 54 33332 39999999999999999999887752 44677777553
No 91
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.05 E-value=0.11 Score=52.17 Aligned_cols=144 Identities=18% Similarity=0.217 Sum_probs=76.7
Q ss_pred ccEEEEEEeccCCC-CCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCc-----eEEEEeC------C
Q 010508 112 ARMFYFFFESRNNK-SDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKAS-----NLLFVDQ------P 179 (508)
Q Consensus 112 ~~lFy~ffes~~~~-~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~a-----nvLyiDq------P 179 (508)
.+.-||++.-...+ ..||||-|+|+-|.....- +-..|++.| =|+|-|+ |
T Consensus 45 ~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~------------------~~sg~d~lAd~~gFlV~yPdg~~~~wn~ 106 (312)
T COG3509 45 LKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQL------------------HGTGWDALADREGFLVAYPDGYDRAWNA 106 (312)
T ss_pred CccceEEEcCCCCCCCCCEEEEEecCCCChHHhh------------------cccchhhhhcccCcEEECcCccccccCC
Confidence 35567888765555 7799999999877644221 112333333 2333321 3
Q ss_pred CCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeee
Q 010508 180 TGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGF 259 (508)
Q Consensus 180 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi 259 (508)
-+.|-+|... +.+.+.+++ ..+.+.+.....+| ......+||+|-|=||..+-.++....+ -+.++
T Consensus 107 ~~~~~~~~p~--~~~~g~ddV-gflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~p~----------~faa~ 172 (312)
T COG3509 107 NGCGNWFGPA--DRRRGVDDV-GFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEYPD----------IFAAI 172 (312)
T ss_pred CcccccCCcc--cccCCccHH-HHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcCcc----------cccce
Confidence 4666665432 222333333 23333333333333 3345689999999999666655554322 36677
Q ss_pred eccCCCC-Chhh-hhhhHHHHHhhhcccch
Q 010508 260 AIGNGLT-DPAI-QYKEYTEYALNMRLIKQ 287 (508)
Q Consensus 260 ~IGNg~~-dp~~-q~~~~~~~a~~~glI~~ 287 (508)
++-.|.. +... .-..-.+....+|..|.
T Consensus 173 A~VAg~~~~~~a~~~~rp~~~m~~~G~~Dp 202 (312)
T COG3509 173 APVAGLLALGVACTPPRPVSVMAFHGTADP 202 (312)
T ss_pred eeeecccCCCcccCCCCchhHHHhcCCCCC
Confidence 7777766 3221 11222344555666655
No 92
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=94.87 E-value=0.15 Score=51.41 Aligned_cols=119 Identities=13% Similarity=0.219 Sum_probs=60.7
Q ss_pred CCCEEEEECCCCCc--hh-hhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCC-CChhhhH
Q 010508 126 SDPVVIWLTGGPGC--SS-ELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIR-HDEEGVS 201 (508)
Q Consensus 126 ~dPlvlWlnGGPGc--SS-~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~-~~~~~~a 201 (508)
++|.+|=.+- =|+ -| +.++|.- | +++ .-.+.+-++-||.| |-..--.+-+.++. .+.++.|
T Consensus 22 ~kp~ilT~HD-vGlNh~scF~~ff~~--~-----~m~------~i~~~f~i~Hi~aP-Gqe~ga~~~p~~y~yPsmd~LA 86 (283)
T PF03096_consen 22 NKPAILTYHD-VGLNHKSCFQGFFNF--E-----DMQ------EILQNFCIYHIDAP-GQEEGAATLPEGYQYPSMDQLA 86 (283)
T ss_dssp TS-EEEEE---TT--HHHHCHHHHCS--H-----HHH------HHHTTSEEEEEE-T-TTSTT-----TT-----HHHHH
T ss_pred CCceEEEecc-ccccchHHHHHHhcc--h-----hHH------HHhhceEEEEEeCC-CCCCCcccccccccccCHHHHH
Confidence 5888888775 244 33 5566643 1 111 12356789999999 76653333233322 3577888
Q ss_pred HHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChhhhhhhHHHHHh
Q 010508 202 NDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAIQYKEYTEYAL 280 (508)
Q Consensus 202 ~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~ 280 (508)
+++-+.|..| .+ +.+.-+|+--|+.....+|..-.+ .+-|+++ ++|.....+..++++
T Consensus 87 e~l~~Vl~~f-----~l--k~vIg~GvGAGAnIL~rfAl~~p~----------~V~GLiL----vn~~~~~~gw~Ew~~ 144 (283)
T PF03096_consen 87 EMLPEVLDHF-----GL--KSVIGFGVGAGANILARFALKHPE----------RVLGLIL----VNPTCTAAGWMEWFY 144 (283)
T ss_dssp CTHHHHHHHH-----T-----EEEEEETHHHHHHHHHHHHSGG----------GEEEEEE----ES---S---HHHHHH
T ss_pred HHHHHHHHhC-----Cc--cEEEEEeeccchhhhhhccccCcc----------ceeEEEE----EecCCCCccHHHHHH
Confidence 8887766655 23 458889999777666666654322 3778887 444445555555544
No 93
>PRK07868 acyl-CoA synthetase; Validated
Probab=94.73 E-value=1.2 Score=52.85 Aligned_cols=62 Identities=18% Similarity=0.156 Sum_probs=48.6
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEE-EEEcCCCccCCc---cCh
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTF-LKVHDAGHMVPM---DQP 481 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf-~~V~~AGHmvP~---DqP 481 (508)
..++|+..|+.|.++|....+.+.+.+. +..+ ..+.++|||.++ .-|
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~-----------------------------~a~~~~~~~~~GH~g~~~g~~a~ 347 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAP-----------------------------NAEVYESLIRAGHFGLVVGSRAA 347 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-----------------------------CCeEEEEeCCCCCEeeeechhhh
Confidence 5899999999999999999988876652 2223 467899999554 567
Q ss_pred HHHHHHHHHHHcCCc
Q 010508 482 KASLQMLQSWMQGKL 496 (508)
Q Consensus 482 ~~a~~ml~~fl~g~~ 496 (508)
+.....+.+||....
T Consensus 348 ~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 348 QQTWPTVADWVKWLE 362 (994)
T ss_pred hhhChHHHHHHHHhc
Confidence 778889999997554
No 94
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=94.68 E-value=1.8 Score=45.87 Aligned_cols=178 Identities=16% Similarity=0.170 Sum_probs=97.6
Q ss_pred cHHHHHHHHhhhcCCcCcccccccCCCCcccCCCCceEEEeecCCCCCCCCCCCccceeeEeEEcCCCCCccEEEEEEec
Q 010508 42 PKLQAEKLIRGLNLFPKSSVNTAAAGDHASVSAPKLVEKQLSLNPLGDPGPSVQEFGHHAGYYTLPHSQSARMFYFFFES 121 (508)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~sGy~~v~~~~~~~lFy~ffes 121 (508)
+..-++++++.+-+.-+.-.+. -|+ ..|++.+- +-++-.+.|.++ -..=+++.++.. .--.=|+...
T Consensus 48 ~~~f~~~l~~~~~~l~~~y~p~----~w~--~~ghlQT~---~~~~~~~~p~~~---y~Reii~~~DGG-~~~lDW~~~~ 114 (409)
T KOG1838|consen 48 DSGFARFLVPKCPLLEEKYLPT----LWL--FSGHLQTL---LLSFFGSKPPVE---YTREIIKTSDGG-TVTLDWVENP 114 (409)
T ss_pred chHHHHHHHhhccccccccccc----eee--cCCeeeee---ehhhcCCCCCCc---ceeEEEEeCCCC-EEEEeeccCc
Confidence 4577888888886666555541 111 23333332 222222333332 113345544322 2333455433
Q ss_pred cC----CC-CCCEEEEECCCCCchhhh------hhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCC
Q 010508 122 RN----NK-SDPVVIWLTGGPGCSSEL------ALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDK 190 (508)
Q Consensus 122 ~~----~~-~dPlvlWlnGGPGcSS~~------glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~ 190 (508)
.. +. ++|+||.|.|=.|.|... ...++.| |+. +-. .++|.|-|--+++
T Consensus 115 ~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~-------------------VVf-N~RG~~g~~LtTp 173 (409)
T KOG1838|consen 115 DSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRV-------------------VVF-NHRGLGGSKLTTP 173 (409)
T ss_pred ccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEE-------------------EEE-CCCCCCCCccCCC
Confidence 22 23 889999999999887632 3334555 331 111 2589888876665
Q ss_pred CCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCC
Q 010508 191 DDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLT 266 (508)
Q Consensus 191 ~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~ 266 (508)
.-+.-. -.+|+-++++.--++|| ..++|.+|.|+||..+ .+.+-+..++ . -=..|++|-|||-
T Consensus 174 r~f~ag---~t~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~iL---~nYLGE~g~~---~-~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 174 RLFTAG---WTEDLREVVNHIKKRYP---QAPLFAVGFSMGGNIL---TNYLGEEGDN---T-PLIAAVAVCNPWD 236 (409)
T ss_pred ceeecC---CHHHHHHHHHHHHHhCC---CCceEEEEecchHHHH---HHHhhhccCC---C-CceeEEEEeccch
Confidence 544322 23567666655546677 4689999999999644 4444442211 1 1257888988883
No 95
>PRK10162 acetyl esterase; Provisional
Probab=94.47 E-value=0.075 Score=54.55 Aligned_cols=45 Identities=16% Similarity=0.050 Sum_probs=33.0
Q ss_pred CCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCC
Q 010508 219 AKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTD 267 (508)
Q Consensus 219 ~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~d 267 (508)
..+++.|+|+|.||+.+-.++.++.+... ....++|+++..|+++
T Consensus 152 d~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 152 NMSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYG 196 (318)
T ss_pred ChhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccC
Confidence 34679999999999999888877755321 1235778888777765
No 96
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=94.22 E-value=0.13 Score=43.77 Aligned_cols=59 Identities=15% Similarity=0.238 Sum_probs=49.0
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
..+||+.+|+.|.++|+.++++..+.|. +-..+++.++||-+-...-.-+.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~-----------------------------~s~lvt~~g~gHg~~~~~s~C~~ 84 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP-----------------------------GSRLVTVDGAGHGVYAGGSPCVD 84 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC-----------------------------CceEEEEeccCcceecCCChHHH
Confidence 3899999999999999999999988874 22459999999999865445668
Q ss_pred HHHHHHHc
Q 010508 486 QMLQSWMQ 493 (508)
Q Consensus 486 ~ml~~fl~ 493 (508)
+++.+|+.
T Consensus 85 ~~v~~yl~ 92 (103)
T PF08386_consen 85 KAVDDYLL 92 (103)
T ss_pred HHHHHHHH
Confidence 88888875
No 97
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=94.20 E-value=0.66 Score=51.16 Aligned_cols=35 Identities=23% Similarity=0.310 Sum_probs=29.8
Q ss_pred hhhhhcCCceEEEEeecCcccCchhhHHHHHhccc
Q 010508 399 IPTLLEDGIRVLIYAGEYDLICNWLGNSKWVHAME 433 (508)
Q Consensus 399 i~~LL~~girVLIY~Gd~D~i~n~~G~~~wi~~L~ 433 (508)
+..|-+...|.|+.+|-.|--|-+.-+.+.+..|.
T Consensus 795 VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lv 829 (867)
T KOG2281|consen 795 VEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALV 829 (867)
T ss_pred HhhCCCCCceEEEEecccccchhhhhHHHHHHHHH
Confidence 44555556899999999999999999999999885
No 98
>COG1647 Esterase/lipase [General function prediction only]
Probab=93.27 E-value=2.9 Score=40.69 Aligned_cols=61 Identities=11% Similarity=0.165 Sum_probs=47.2
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccC-hHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQ-PKAS 484 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~Dq-P~~a 484 (508)
-++++|..|..|-++|..+++...+++.-..+ .+.+..++||.+-.|. .+..
T Consensus 181 ~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~K---------------------------eL~~~e~SgHVIt~D~Erd~v 233 (243)
T COG1647 181 YSPTLVVQGRQDEMVPAESANFIYDHVESDDK---------------------------ELKWLEGSGHVITLDKERDQV 233 (243)
T ss_pred ccchhheecccCCCCCHHHHHHHHHhccCCcc---------------------------eeEEEccCCceeecchhHHHH
Confidence 47999999999999999999999888752211 1267889999999984 4556
Q ss_pred HHHHHHHHc
Q 010508 485 LQMLQSWMQ 493 (508)
Q Consensus 485 ~~ml~~fl~ 493 (508)
.+-+-+|++
T Consensus 234 ~e~V~~FL~ 242 (243)
T COG1647 234 EEDVITFLE 242 (243)
T ss_pred HHHHHHHhh
Confidence 666777775
No 99
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=92.98 E-value=0.34 Score=55.55 Aligned_cols=98 Identities=19% Similarity=0.239 Sum_probs=61.1
Q ss_pred CCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcc-cccC--------CCCC---
Q 010508 126 SDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFS-YTSD--------KDDI--- 193 (508)
Q Consensus 126 ~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfS-y~~~--------~~~~--- 193 (508)
..|+||++||=.|.....-.+.+ .|.. +-..++-+|.| |.|-| ...+ ....
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~----------~La~------~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~y~ 510 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAG----------TLAA------AGVATIAIDHP-LHGARSFDANASGVNATNANVLAYM 510 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHH----------HHHh------CCcEEEEeCCC-CCCccccccccccccccccCcccee
Confidence 45899999997666543322222 1211 12468899987 99988 4311 1111
Q ss_pred --------CCChhhhHHHHHHHHHHHHH----------hCCCCCCCCEEEEcccccccchHHHHHH
Q 010508 194 --------RHDEEGVSNDLYDFLQAFFA----------EHPQYAKNDFYITGESYAGHYIPAFASR 241 (508)
Q Consensus 194 --------~~~~~~~a~d~~~fL~~F~~----------~~Pe~~~~~~yI~GESYgG~yvP~lA~~ 241 (508)
+.+.++...|+.. |+..+. .+..+...++++.|||.||..+..++..
T Consensus 511 Nl~~l~~aRDn~rQ~v~Dll~-L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 511 NLASLLVARDNLRQSILDLLG-LRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccccccccCHHHHHHHHHH-HHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 2355677788876 444444 1233556799999999999888887754
No 100
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=92.01 E-value=0.92 Score=44.22 Aligned_cols=50 Identities=20% Similarity=0.267 Sum_probs=33.3
Q ss_pred HHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCC
Q 010508 207 FLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLT 266 (508)
Q Consensus 207 fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~ 266 (508)
.|.+.+......-.+++|++|.|-||...-.++....+ -+.++++-.|..
T Consensus 83 ~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd----------~faa~a~~sG~~ 132 (220)
T PF10503_consen 83 ALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPD----------LFAAVAVVSGVP 132 (220)
T ss_pred HHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCc----------cceEEEeecccc
Confidence 34444444445667899999999999666666655433 367777766654
No 101
>PLN02454 triacylglycerol lipase
Probab=90.89 E-value=0.53 Score=49.93 Aligned_cols=70 Identities=11% Similarity=0.159 Sum_probs=51.2
Q ss_pred CChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCC
Q 010508 195 HDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTD 267 (508)
Q Consensus 195 ~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~d 267 (508)
.+...+.+++...++...+++|..+. .++|+|||.||-.+-..|..|...... ...++++.+..|.|-+.
T Consensus 203 f~~~S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 203 FTKLSARSQLLAKIKELLERYKDEKL-SIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVG 272 (414)
T ss_pred chhHHHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCccc
Confidence 34445778999999999998887642 599999999998888888777654211 12345677888887764
No 102
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=90.25 E-value=0.74 Score=49.94 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHH
Q 010508 204 LYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFA 239 (508)
Q Consensus 204 ~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA 239 (508)
.++++++-...|. -..+++.|+|+|.||+.+-.++
T Consensus 160 al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 160 ALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHh
Confidence 3444555544442 3456899999999997654443
No 103
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=89.93 E-value=0.44 Score=45.77 Aligned_cols=59 Identities=17% Similarity=0.268 Sum_probs=41.0
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
+++|++.+|+.|.++|....+...+.|+=. ..+++|.++.+.||-++. +.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~-------------------------~~~v~~~~~~g~gH~i~~----~~~ 205 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAA-------------------------GANVEFHEYPGGGHEISP----EEL 205 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCT-------------------------T-GEEEEEETT-SSS--H----HHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhc-------------------------CCCEEEEEcCCCCCCCCH----HHH
Confidence 579999999999999999888887777411 125788999999999974 455
Q ss_pred HHHHHHHc
Q 010508 486 QMLQSWMQ 493 (508)
Q Consensus 486 ~ml~~fl~ 493 (508)
..+.+||.
T Consensus 206 ~~~~~~l~ 213 (216)
T PF02230_consen 206 RDLREFLE 213 (216)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 56666764
No 104
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=89.24 E-value=2.4 Score=42.96 Aligned_cols=65 Identities=17% Similarity=0.127 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHHHhCCCC--CCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChhh
Q 010508 200 VSNDLYDFLQAFFAEHPQY--AKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAI 270 (508)
Q Consensus 200 ~a~d~~~fL~~F~~~~Pe~--~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~ 270 (508)
..+|.++.++-....-.+| ..+++.|+|+|-||+.+-.++....+.. ...+++.++..|++|...
T Consensus 129 ~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 129 ALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred hHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 3456666555444332233 3568999999999999999999887641 234677778788887765
No 105
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=88.58 E-value=2 Score=41.61 Aligned_cols=108 Identities=19% Similarity=0.281 Sum_probs=69.2
Q ss_pred CCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCC-CCCCCChhhhHHHH
Q 010508 126 SDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDK-DDIRHDEEGVSNDL 204 (508)
Q Consensus 126 ~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~-~~~~~~~~~~a~d~ 204 (508)
..|.+|.++|--|--. .+.- ... ... -+-..||+-+|- +|-|.|.+... .+...|.+
T Consensus 77 S~pTlLyfh~NAGNmG---hr~~------i~~-~fy-----~~l~mnv~ivsY-RGYG~S~GspsE~GL~lDs~------ 134 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMG---HRLP------IAR-VFY-----VNLKMNVLIVSY-RGYGKSEGSPSEEGLKLDSE------ 134 (300)
T ss_pred CCceEEEEccCCCccc---chhh------HHH-HHH-----HHcCceEEEEEe-eccccCCCCccccceeccHH------
Confidence 8999999998766522 1111 000 000 022368999998 79999987542 23333322
Q ss_pred HHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCC
Q 010508 205 YDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTD 267 (508)
Q Consensus 205 ~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~d 267 (508)
...+++-.+|...++++.++|-|-||.-+-++|++-. -.+.++++-|-+++
T Consensus 135 --avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~----------~ri~~~ivENTF~S 185 (300)
T KOG4391|consen 135 --AVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNS----------DRISAIIVENTFLS 185 (300)
T ss_pred --HHHHHHhcCccCCcceEEEEecccCCeeEEEeeccch----------hheeeeeeechhcc
Confidence 2334556788999999999999999966555554432 25788888887764
No 106
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=88.54 E-value=0.52 Score=47.03 Aligned_cols=96 Identities=22% Similarity=0.142 Sum_probs=61.3
Q ss_pred ceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccc
Q 010508 171 SNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQ 250 (508)
Q Consensus 171 anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~ 250 (508)
..+|.+|. +|+|-|.+.-... ...-++|.++ +.+|+.+-|-- +-++-++|.||+|......|..-.
T Consensus 58 Y~vV~~D~-RG~g~S~G~~~~~----~~~e~~D~~d-~I~W~~~Qpws-~G~VGm~G~SY~G~~q~~~A~~~~------- 123 (272)
T PF02129_consen 58 YAVVVQDV-RGTGGSEGEFDPM----SPNEAQDGYD-TIEWIAAQPWS-NGKVGMYGISYGGFTQWAAAARRP------- 123 (272)
T ss_dssp -EEEEEE--TTSTTS-S-B-TT----SHHHHHHHHH-HHHHHHHCTTE-EEEEEEEEETHHHHHHHHHHTTT--------
T ss_pred CEEEEECC-cccccCCCccccC----ChhHHHHHHH-HHHHHHhCCCC-CCeEEeeccCHHHHHHHHHHhcCC-------
Confidence 38899996 7999998754321 3345678888 66788887544 347999999999987777666322
Q ss_pred cceEeeeeeeccCCCCChhhhhhhHHHHHhhhcccchhh
Q 010508 251 GIHINLKGFAIGNGLTDPAIQYKEYTEYALNMRLIKQSD 289 (508)
Q Consensus 251 ~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~glI~~~~ 289 (508)
-.||.|+...+..|.... ..+..|++....
T Consensus 124 ---p~LkAi~p~~~~~d~~~~------~~~~gG~~~~~~ 153 (272)
T PF02129_consen 124 ---PHLKAIVPQSGWSDLYRD------SIYPGGAFRLGF 153 (272)
T ss_dssp ---TTEEEEEEESE-SBTCCT------SSEETTEEBCCH
T ss_pred ---CCceEEEecccCCccccc------chhcCCcccccc
Confidence 248999887777765442 234455555433
No 107
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.18 E-value=0.98 Score=44.55 Aligned_cols=102 Identities=18% Similarity=0.342 Sum_probs=54.1
Q ss_pred CCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCC----CCCCCceEEEEeCCCCCCcccccCCCCCCCChhhh
Q 010508 125 KSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDY----GWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGV 200 (508)
Q Consensus 125 ~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~----sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~ 200 (508)
.++|+++|+.|-||-+....-|.- +|..|-- -|+ .+++=-.+.|.-+=-+-+....++ .+.++.
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~----------~L~~~l~~r~~~wt-Ish~~H~~~P~sl~~~~s~~~~ei-fsL~~Q 94 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFAR----------HLHLNLIDRLPVWT-ISHAGHALMPASLREDHSHTNEEI-FSLQDQ 94 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHH----------HHHHhcccccceeE-EeccccccCCcccccccccccccc-cchhhH
Confidence 489999999999998775533321 1111111 121 122223344521111111111111 233334
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhccc
Q 010508 201 SNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNK 247 (508)
Q Consensus 201 a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~ 247 (508)
.+.=.+|++++.- +++++||.|||-|. ++..+|+..++
T Consensus 95 V~HKlaFik~~~P-----k~~ki~iiGHSiGa----Ym~Lqil~~~k 132 (301)
T KOG3975|consen 95 VDHKLAFIKEYVP-----KDRKIYIIGHSIGA----YMVLQILPSIK 132 (301)
T ss_pred HHHHHHHHHHhCC-----CCCEEEEEecchhH----HHHHHHhhhcc
Confidence 4566677776642 47789999999987 66667666543
No 108
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=87.61 E-value=0.86 Score=40.15 Aligned_cols=61 Identities=20% Similarity=0.303 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCC
Q 010508 200 VSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLT 266 (508)
Q Consensus 200 ~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~ 266 (508)
..+.+.+.|++..+++| ..++.|+|||-||-.+..+|..+.++... ...+++-+..|.|-+
T Consensus 46 ~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 46 LYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCccc
Confidence 44566777788777776 46899999999999999999998876432 135667777777765
No 109
>COG4099 Predicted peptidase [General function prediction only]
Probab=87.02 E-value=6 Score=40.20 Aligned_cols=118 Identities=19% Similarity=0.249 Sum_probs=60.6
Q ss_pred CCCCccEEEEEEeccC-CC--C-CCEEEEECCCCCchh--hhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCC
Q 010508 108 HSQSARMFYFFFESRN-NK--S-DPVVIWLTGGPGCSS--ELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTG 181 (508)
Q Consensus 108 ~~~~~~lFy~ffes~~-~~--~-dPlvlWlnGGPGcSS--~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvG 181 (508)
.+.++.|=|-||.-.. +| + -||||||||+--.++ ..-+....|-..... --.=.||=.|-
T Consensus 168 ~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~-------------pedqcfVlAPQ- 233 (387)
T COG4099 168 ESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAG-------------PEDQCFVLAPQ- 233 (387)
T ss_pred cccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeec-------------ccCceEEEccc-
Confidence 3556789999997643 23 3 499999999753333 122223333322211 00003333331
Q ss_pred CCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHH
Q 010508 182 TGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVH 243 (508)
Q Consensus 182 tGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~ 243 (508)
|..--.+.....+.--....+.+.+-+..++..-.+++|++|-|-||.-.=+++.+..
T Consensus 234 ----y~~if~d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfP 291 (387)
T COG4099 234 ----YNPIFADSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFP 291 (387)
T ss_pred ----ccccccccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCc
Confidence 2110000000111112233444555556677777889999999999966555555443
No 110
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=86.41 E-value=1.7 Score=41.70 Aligned_cols=54 Identities=19% Similarity=0.177 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCCh
Q 010508 203 DLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDP 268 (508)
Q Consensus 203 d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp 268 (508)
.+.+++.+..+. ....++++|.|-|-||...-.++.+. +-.+.|++.-+|++-+
T Consensus 89 ~l~~li~~~~~~--~i~~~ri~l~GFSQGa~~al~~~l~~----------p~~~~gvv~lsG~~~~ 142 (216)
T PF02230_consen 89 RLDELIDEEVAY--GIDPSRIFLGGFSQGAAMALYLALRY----------PEPLAGVVALSGYLPP 142 (216)
T ss_dssp HHHHHHHHHHHT--T--GGGEEEEEETHHHHHHHHHHHCT----------SSTSSEEEEES---TT
T ss_pred HHHHHHHHHHHc--CCChhheehhhhhhHHHHHHHHHHHc----------CcCcCEEEEeeccccc
Confidence 344444443332 25567899999999995555554432 1257888888887644
No 111
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=85.98 E-value=1.5 Score=41.65 Aligned_cols=53 Identities=21% Similarity=0.296 Sum_probs=36.6
Q ss_pred HHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChhhhhh
Q 010508 205 YDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAIQYK 273 (508)
Q Consensus 205 ~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~ 273 (508)
.+.+.+.++. ....++.|+|.|.||.|+-.+|.+. +++. ++.||.+.|.....
T Consensus 46 ~~~l~~~i~~---~~~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~l~ 98 (187)
T PF05728_consen 46 IAQLEQLIEE---LKPENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYELLQ 98 (187)
T ss_pred HHHHHHHHHh---CCCCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHHHH
Confidence 3445555553 3445599999999999998888765 3444 56688888776544
No 112
>PLN02571 triacylglycerol lipase
Probab=85.60 E-value=2.1 Score=45.54 Aligned_cols=69 Identities=7% Similarity=0.101 Sum_probs=48.1
Q ss_pred hhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcc--cc--cccceEeeeeeeccCCCCC
Q 010508 198 EGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGN--KE--KQGIHINLKGFAIGNGLTD 267 (508)
Q Consensus 198 ~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n--~~--~~~~~inLkGi~IGNg~~d 267 (508)
..+.++++..|+.+.+++|.. ...++|+|||.||-.+-..|..|.... +. .....+.+..+..|.|-+.
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVG 276 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVG 276 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCcc
Confidence 345678888899988888764 346999999999988888888876531 11 1112345667777777664
No 113
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=84.96 E-value=3.9 Score=49.79 Aligned_cols=91 Identities=13% Similarity=0.209 Sum_probs=59.2
Q ss_pred CCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHH
Q 010508 126 SDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLY 205 (508)
Q Consensus 126 ~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~ 205 (508)
+.|-++.++|++|.+.....+.+ .......++-+|.| |.|-+. ....+.++.|+++.
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~-----------------~l~~~~~v~~~~~~-g~~~~~-----~~~~~l~~la~~~~ 1123 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSR-----------------YLDPQWSIYGIQSP-RPDGPM-----QTATSLDEVCEAHL 1123 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHH-----------------hcCCCCcEEEEECC-CCCCCC-----CCCCCHHHHHHHHH
Confidence 34668889998887654433322 11234678888988 666431 12245566777776
Q ss_pred HHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhc
Q 010508 206 DFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKG 245 (508)
Q Consensus 206 ~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~ 245 (508)
+.++.. .| ..++.|.|+|+||..+-.+|.++.+.
T Consensus 1124 ~~i~~~---~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~ 1157 (1296)
T PRK10252 1124 ATLLEQ---QP---HGPYHLLGYSLGGTLAQGIAARLRAR 1157 (1296)
T ss_pred HHHHhh---CC---CCCEEEEEechhhHHHHHHHHHHHHc
Confidence 666532 12 35899999999998888888877653
No 114
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=84.88 E-value=5.9 Score=40.42 Aligned_cols=69 Identities=7% Similarity=0.167 Sum_probs=38.1
Q ss_pred hhhhHHHHHHHHHHHHHh-CCC-CCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChhhh
Q 010508 197 EEGVSNDLYDFLQAFFAE-HPQ-YAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAIQ 271 (508)
Q Consensus 197 ~~~~a~d~~~fL~~F~~~-~Pe-~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q 271 (508)
.++-++|+-+.+ ++++. ... +...++.|+|||=|..=+-.+..+-.... ..-.++|+++=.|.-|.+..
T Consensus 83 L~~D~~eI~~~v-~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~-----~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 83 LDRDVEEIAQLV-EYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSP-----SRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp HHHHHHHHHHHH-HHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT--------CCCEEEEEEEEE---TTST
T ss_pred hhhHHHHHHHHH-HHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccc-----cccceEEEEEeCCCCChhHh
Confidence 344566776644 44443 322 45678999999999977666555443211 13568999998888876644
No 115
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=84.52 E-value=1.5 Score=41.37 Aligned_cols=64 Identities=17% Similarity=0.180 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHHHHHhC--CCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCCh
Q 010508 199 GVSNDLYDFLQAFFAEH--PQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDP 268 (508)
Q Consensus 199 ~~a~d~~~fL~~F~~~~--Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp 268 (508)
+..+|+.++++-..+.- -.+..++++|+|+|-||+.+-.++.++.+... ..++|+++-.|++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~------~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGL------PKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTT------CHESEEEEESCHSST
T ss_pred ccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcc------cchhhhhcccccccc
Confidence 45677777665444420 13556789999999999999999988877531 238999999998876
No 116
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=84.32 E-value=5.4 Score=38.35 Aligned_cols=60 Identities=12% Similarity=0.138 Sum_probs=45.9
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
.++.||.+|..|..|+-... -||..+. ..--+....+.+|.....-|++..
T Consensus 216 kcPtli~hG~kDp~~~~~hv-~fi~~~~----------------------------~~a~~~~~peGkHn~hLrya~eFn 266 (277)
T KOG2984|consen 216 KCPTLIMHGGKDPFCGDPHV-CFIPVLK----------------------------SLAKVEIHPEGKHNFHLRYAKEFN 266 (277)
T ss_pred cCCeeEeeCCcCCCCCCCCc-cchhhhc----------------------------ccceEEEccCCCcceeeechHHHH
Confidence 69999999999999986554 4444331 011235678899999999999999
Q ss_pred HHHHHHHcC
Q 010508 486 QMLQSWMQG 494 (508)
Q Consensus 486 ~ml~~fl~g 494 (508)
.++.+|++.
T Consensus 267 klv~dFl~~ 275 (277)
T KOG2984|consen 267 KLVLDFLKS 275 (277)
T ss_pred HHHHHHHhc
Confidence 999999864
No 117
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=83.55 E-value=2.5 Score=38.10 Aligned_cols=43 Identities=19% Similarity=0.262 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhc
Q 010508 200 VSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKG 245 (508)
Q Consensus 200 ~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~ 245 (508)
+.+.+...+++...++| ..+++|+|+|.||..+-.+|.++...
T Consensus 10 ~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 10 LANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 44555555666655555 45899999999999999988888664
No 118
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=83.47 E-value=1.8 Score=41.63 Aligned_cols=72 Identities=13% Similarity=0.141 Sum_probs=49.2
Q ss_pred CCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeee
Q 010508 180 TGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGF 259 (508)
Q Consensus 180 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi 259 (508)
+-|||-+++.. ++.+++..++..+++--|+.+|.-+ .+-+.|||-|.|.+.....|+.+ -.+.|+
T Consensus 101 asvgY~l~~q~----htL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r~---------prI~gl 165 (270)
T KOG4627|consen 101 ASVGYNLCPQV----HTLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQRS---------PRIWGL 165 (270)
T ss_pred EEeccCcCccc----ccHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhcC---------chHHHH
Confidence 35677776543 5667788888888877777776433 49999999999887777777532 135566
Q ss_pred eccCCCC
Q 010508 260 AIGNGLT 266 (508)
Q Consensus 260 ~IGNg~~ 266 (508)
++-+|+-
T Consensus 166 ~l~~GvY 172 (270)
T KOG4627|consen 166 ILLCGVY 172 (270)
T ss_pred HHHhhHh
Confidence 6555553
No 119
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=82.76 E-value=34 Score=34.87 Aligned_cols=35 Identities=29% Similarity=0.392 Sum_probs=31.4
Q ss_pred CeEEEEEcCCCccCCccChHHHHHHHHHHHcCCcC
Q 010508 463 PLTFLKVHDAGHMVPMDQPKASLQMLQSWMQGKLA 497 (508)
Q Consensus 463 ~Ltf~~V~~AGHmvP~DqP~~a~~ml~~fl~g~~~ 497 (508)
+-|+++|-++|-++..+||.+..+-++-|++|.-.
T Consensus 274 ~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy 308 (326)
T KOG2931|consen 274 YTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGY 308 (326)
T ss_pred cceEEEEcccCCcccccCchHHHHHHHHHHccCCc
Confidence 35679999999999999999999999999999763
No 120
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=82.57 E-value=5.1 Score=42.84 Aligned_cols=96 Identities=17% Similarity=0.222 Sum_probs=55.2
Q ss_pred ceEEEEeCCCCCCcccccCC---CCCC-CChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcc
Q 010508 171 SNLLFVDQPTGTGFSYTSDK---DDIR-HDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGN 246 (508)
Q Consensus 171 anvLyiDqPvGtGfSy~~~~---~~~~-~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n 246 (508)
|-||+++. +==|-|.-..+ ...+ .+.+++-.|+..|++.+-.++....+.|+.++|-||||....-+-.+..+
T Consensus 60 a~~v~lEH-RyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~-- 136 (434)
T PF05577_consen 60 ALVVALEH-RYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH-- 136 (434)
T ss_dssp EEEEEE---TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT--
T ss_pred CcEEEeeh-hhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC--
Confidence 56777775 55666652111 1111 46788889999999988777766677899999999999444333333322
Q ss_pred cccccceEeeeeeeccCCCCChhhhhhhHHH
Q 010508 247 KEKQGIHINLKGFAIGNGLTDPAIQYKEYTE 277 (508)
Q Consensus 247 ~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~ 277 (508)
-+.|..--++-+....++..|.+
T Consensus 137 --------~~~ga~ASSapv~a~~df~~y~~ 159 (434)
T PF05577_consen 137 --------LFDGAWASSAPVQAKVDFWEYFE 159 (434)
T ss_dssp --------T-SEEEEET--CCHCCTTTHHHH
T ss_pred --------eeEEEEeccceeeeecccHHHHH
Confidence 24555556666666666655544
No 121
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=82.36 E-value=2.5 Score=40.84 Aligned_cols=59 Identities=15% Similarity=0.234 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCC
Q 010508 200 VSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLT 266 (508)
Q Consensus 200 ~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~ 266 (508)
+.+++...+++..+++| ..+++++|||.||-.+..+|..+.+.. ...+++.+..|.|-+
T Consensus 110 ~~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~v 168 (229)
T cd00519 110 LYNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCC
Confidence 33455555666666655 457999999999999888888876542 134578888888776
No 122
>PLN02753 triacylglycerol lipase
Probab=81.62 E-value=3.4 Score=45.06 Aligned_cols=73 Identities=16% Similarity=0.192 Sum_probs=49.6
Q ss_pred CChhhhHHHHHHHHHHHHHhCCC--CCCCCEEEEcccccccchHHHHHHHHhc--ccccccceEeeeeeeccCCCCC
Q 010508 195 HDEEGVSNDLYDFLQAFFAEHPQ--YAKNDFYITGESYAGHYIPAFASRVHKG--NKEKQGIHINLKGFAIGNGLTD 267 (508)
Q Consensus 195 ~~~~~~a~d~~~fL~~F~~~~Pe--~~~~~~yI~GESYgG~yvP~lA~~i~~~--n~~~~~~~inLkGi~IGNg~~d 267 (508)
.+...+.+++.+.++....++|. .....++|+|||.||-.+...|..|.+. |+...+..+++.-+..|.|-+.
T Consensus 284 ~~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVG 360 (531)
T PLN02753 284 FAKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVG 360 (531)
T ss_pred cchhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCcc
Confidence 33445778899999999888763 2345799999999998888888777653 1111122345566667666653
No 123
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=81.57 E-value=4.1 Score=42.16 Aligned_cols=64 Identities=20% Similarity=0.362 Sum_probs=42.8
Q ss_pred CCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCC-CCCCCEEEEcccccccchHHHHHHHHh
Q 010508 169 KASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQ-YAKNDFYITGESYAGHYIPAFASRVHK 244 (508)
Q Consensus 169 k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe-~~~~~~yI~GESYgG~yvP~lA~~i~~ 244 (508)
..+|||..-.| |||+|.+... .++...| ++++.++++.+++ -+.+++.+.|+|-|| .++...++
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~~s------~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG----~Vqa~AL~ 234 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGPPS------RKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGG----GVQAEALK 234 (365)
T ss_pred cCCcEEEECCC-ccccCCCCCC------HHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccH----HHHHHHHH
Confidence 35799999988 9999976431 2233333 4556667765443 356789999999999 45444444
No 124
>PLN02719 triacylglycerol lipase
Probab=81.56 E-value=3.3 Score=45.08 Aligned_cols=70 Identities=16% Similarity=0.185 Sum_probs=48.2
Q ss_pred hhhhHHHHHHHHHHHHHhCCCC--CCCCEEEEcccccccchHHHHHHHHhc--ccccccceEeeeeeeccCCCC
Q 010508 197 EEGVSNDLYDFLQAFFAEHPQY--AKNDFYITGESYAGHYIPAFASRVHKG--NKEKQGIHINLKGFAIGNGLT 266 (508)
Q Consensus 197 ~~~~a~d~~~fL~~F~~~~Pe~--~~~~~yI~GESYgG~yvP~lA~~i~~~--n~~~~~~~inLkGi~IGNg~~ 266 (508)
...+.+++...|+...+++|.. ....+.|+|||.||-.+...|..|.+. |+...+..+.+.-+..|.|-+
T Consensus 272 k~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRV 345 (518)
T PLN02719 272 KFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRV 345 (518)
T ss_pred chhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCc
Confidence 3456788999999999888865 334799999999999888888888753 111111223455566666655
No 125
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=81.22 E-value=2.8 Score=44.32 Aligned_cols=62 Identities=15% Similarity=0.222 Sum_probs=45.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCC-CCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChhhh
Q 010508 200 VSNDLYDFLQAFFAEHPQYAK-NDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAIQ 271 (508)
Q Consensus 200 ~a~d~~~fL~~F~~~~Pe~~~-~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q 271 (508)
.|.|...+|..-.+.+|.+.. .|..+.|.|||| |+..|+.+|. +-.+.||+=-+++.-|..+
T Consensus 162 qAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a---------P~~~~~~iDns~~~~p~l~ 224 (403)
T PF11144_consen 162 QAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA---------PWLFDGVIDNSSYALPPLR 224 (403)
T ss_pred HHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC---------ccceeEEEecCccccchhh
Confidence 678999999999899999986 799999999998 5556666653 3346666655555555443
No 126
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=79.91 E-value=8.9 Score=30.90 Aligned_cols=76 Identities=22% Similarity=0.262 Sum_probs=47.6
Q ss_pred cEEEEEEeccCCCCCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCC
Q 010508 113 RMFYFFFESRNNKSDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDD 192 (508)
Q Consensus 113 ~lFy~ffes~~~~~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~ 192 (508)
+||+..+...+. .+.+|+.++|--..|.-..-+.+ .|..+- .+|+-+|+. |.|.|-+.. .
T Consensus 3 ~L~~~~w~p~~~-~k~~v~i~HG~~eh~~ry~~~a~----------~L~~~G------~~V~~~D~r-GhG~S~g~r--g 62 (79)
T PF12146_consen 3 KLFYRRWKPENP-PKAVVVIVHGFGEHSGRYAHLAE----------FLAEQG------YAVFAYDHR-GHGRSEGKR--G 62 (79)
T ss_pred EEEEEEecCCCC-CCEEEEEeCCcHHHHHHHHHHHH----------HHHhCC------CEEEEECCC-cCCCCCCcc--c
Confidence 577777755443 68899999986444443333322 233333 378899995 999997532 2
Q ss_pred CCCChhhhHHHHHHHH
Q 010508 193 IRHDEEGVSNDLYDFL 208 (508)
Q Consensus 193 ~~~~~~~~a~d~~~fL 208 (508)
...+-+...+|+..|+
T Consensus 63 ~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 63 HIDSFDDYVDDLHQFI 78 (79)
T ss_pred ccCCHHHHHHHHHHHh
Confidence 3345566777777665
No 127
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=79.29 E-value=29 Score=33.75 Aligned_cols=123 Identities=12% Similarity=0.071 Sum_probs=62.6
Q ss_pred CCCEEEEECCCCCchhhhhhhh-cCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHH
Q 010508 126 SDPVVIWLTGGPGCSSELALFY-ENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDL 204 (508)
Q Consensus 126 ~dPlvlWlnGGPGcSS~~glf~-E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~ 204 (508)
+...||+++|--|......-+. +. .. .. ....+....++.-+|-.- =+|.-.. ....+.++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~-----~~--~~--~~~~~~~~~d~ft~df~~--~~s~~~g-----~~l~~q~~~~ 66 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASEL-----QR--KA--LLNDNSSHFDFFTVDFNE--ELSAFHG-----RTLQRQAEFL 66 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHH-----hh--hh--hhccCccceeEEEeccCc--ccccccc-----ccHHHHHHHH
Confidence 4678999999888766432221 11 00 00 011233346666666432 1121111 1112234445
Q ss_pred HHHHHHHHHhC--CCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeee-ccCCCCChhhh
Q 010508 205 YDFLQAFFAEH--PQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFA-IGNGLTDPAIQ 271 (508)
Q Consensus 205 ~~fL~~F~~~~--Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~-IGNg~~dp~~q 271 (508)
-+.++...+.+ ..-..+++.|.|||.||. +|+.++..... ..-++++++ +|.|...+.+.
T Consensus 67 ~~~i~~i~~~~~~~~~~~~~vilVgHSmGGl----var~~l~~~~~---~~~~v~~iitl~tPh~g~~~~ 129 (225)
T PF07819_consen 67 AEAIKYILELYKSNRPPPRSVILVGHSMGGL----VARSALSLPNY---DPDSVKTIITLGTPHRGSPLA 129 (225)
T ss_pred HHHHHHHHHhhhhccCCCCceEEEEEchhhH----HHHHHHhcccc---ccccEEEEEEEcCCCCCcccc
Confidence 55555555443 223467899999999993 44444432111 123466666 88888776543
No 128
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=79.28 E-value=4.5 Score=42.78 Aligned_cols=66 Identities=23% Similarity=0.363 Sum_probs=41.7
Q ss_pred CceEEEEe-------CCCCCCcccccCCC-CCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHH
Q 010508 170 ASNLLFVD-------QPTGTGFSYTSDKD-DIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAF 238 (508)
Q Consensus 170 ~anvLyiD-------qPvGtGfSy~~~~~-~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~l 238 (508)
.|-|+|++ +|.|.- ||.+... .+ .+.+++-.|+-+ |..++++...=...++..+|-||||+...-+
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgy-LtseQALADfA~-ll~~lK~~~~a~~~pvIafGGSYGGMLaAWf 184 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGY-LTSEQALADFAE-LLTFLKRDLSAEASPVIAFGGSYGGMLAAWF 184 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhcc-ccHHHHHHHHHH-HHHHHhhccccccCcEEEecCchhhHHHHHH
Confidence 46788887 577776 5543221 22 244555556544 6667777544456799999999999544443
No 129
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=78.99 E-value=8.8 Score=35.23 Aligned_cols=65 Identities=15% Similarity=0.213 Sum_probs=41.6
Q ss_pred CCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhc
Q 010508 169 KASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKG 245 (508)
Q Consensus 169 k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~ 245 (508)
...+++-+|.| |.|.+-. ...+.+..+++..+.++. .. ...++.++|+|+||..+-.+|.++.+.
T Consensus 24 ~~~~v~~~~~~-g~~~~~~-----~~~~~~~~~~~~~~~l~~---~~---~~~~~~l~g~s~Gg~~a~~~a~~l~~~ 88 (212)
T smart00824 24 GRRDVSALPLP-GFGPGEP-----LPASADALVEAQAEAVLR---AA---GGRPFVLVGHSSGGLLAHAVAARLEAR 88 (212)
T ss_pred CCccEEEecCC-CCCCCCC-----CCCCHHHHHHHHHHHHHH---hc---CCCCeEEEEECHHHHHHHHHHHHHHhC
Confidence 44688899987 6664321 122334444444444432 22 246899999999999888888887654
No 130
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=76.41 E-value=0.79 Score=47.51 Aligned_cols=71 Identities=17% Similarity=0.231 Sum_probs=45.2
Q ss_pred CCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHh
Q 010508 169 KASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHK 244 (508)
Q Consensus 169 k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~ 244 (508)
...|||.||=-.+..-.|... ..+...++..+-.||+...... .+...+++|.|+|.|+|.+=..++++..
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~a----~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQA----VANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHHH----HHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CCceEEEEcchhhccccccch----hhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 357999999755544444321 1234456777777776666332 3445789999999999999888888765
No 131
>PRK04940 hypothetical protein; Provisional
Probab=76.32 E-value=5.2 Score=37.76 Aligned_cols=42 Identities=12% Similarity=0.043 Sum_probs=31.7
Q ss_pred CCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChhhhhhhH
Q 010508 221 NDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAIQYKEY 275 (508)
Q Consensus 221 ~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~ 275 (508)
.++.|+|.|-||.|+..+|.+. .++.|+ -||.+.|......+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~------------g~~aVL-iNPAv~P~~~L~~~ 101 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC------------GIRQVI-FNPNLFPEENMEGK 101 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH------------CCCEEE-ECCCCChHHHHHHH
Confidence 4799999999999998888875 355554 58999886654433
No 132
>PF03283 PAE: Pectinacetylesterase
Probab=75.62 E-value=30 Score=36.34 Aligned_cols=125 Identities=18% Similarity=0.111 Sum_probs=65.9
Q ss_pred EEEEeccCCCCCCEEEEECCCCCchhhh----hhhhcCCCeEE-----eCCC----cccccCCCCCCCceEEEEeCCCCC
Q 010508 116 YFFFESRNNKSDPVVIWLTGGPGCSSEL----ALFYENGPFHI-----ANNL----SLVWNDYGWDKASNLLFVDQPTGT 182 (508)
Q Consensus 116 y~ffes~~~~~dPlvlWlnGGPGcSS~~----glf~E~GP~~i-----~~~~----~l~~N~~sW~k~anvLyiDqPvGt 182 (508)
|++-+......+-+||.|.||-.|.+.. ....+.|-... .-++ .-..||.=|+ .|++||=. -+
T Consensus 39 yy~~~g~g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~--wN~V~vpY--C~ 114 (361)
T PF03283_consen 39 YYFRPGSGSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYN--WNHVFVPY--CD 114 (361)
T ss_pred EEEccCCCCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCcccc--ccEEEEEe--cC
Confidence 4444432233789999999999996642 22234553321 1111 2335663222 57888855 55
Q ss_pred CcccccCCCCCCCCh---hhhHHHHHHHHHHHHHhCCCCC-CCCEEEEcccccccchHHHHHHHHhc
Q 010508 183 GFSYTSDKDDIRHDE---EGVSNDLYDFLQAFFAEHPQYA-KNDFYITGESYAGHYIPAFASRVHKG 245 (508)
Q Consensus 183 GfSy~~~~~~~~~~~---~~~a~d~~~fL~~F~~~~Pe~~-~~~~yI~GESYgG~yvP~lA~~i~~~ 245 (508)
|-+++-+........ .-....+++++.+++... .+. ..++.|+|.|-||.-+..-+.++.+.
T Consensus 115 Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~-gl~~a~~vlltG~SAGG~g~~~~~d~~~~~ 180 (361)
T PF03283_consen 115 GDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSN-GLPNAKQVLLTGCSAGGLGAILHADYVRDR 180 (361)
T ss_pred CccccCcccccccCCceeEeecHHHHHHHHHHHHHh-cCcccceEEEeccChHHHHHHHHHHHHHHH
Confidence 555532211111111 112234444455554433 232 35799999999997776666666553
No 133
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=74.98 E-value=14 Score=38.39 Aligned_cols=102 Identities=22% Similarity=0.351 Sum_probs=66.1
Q ss_pred CCCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHH
Q 010508 126 SDPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLY 205 (508)
Q Consensus 126 ~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~ 205 (508)
-.-|||..-|--| |+|.|=.. ....+.+-.-+||. | |-+-|.+. .+++++..+++-+.
T Consensus 242 gq~LvIC~EGNAG-------FYEvG~m~--tP~~lgYsvLGwNh---------P-GFagSTG~---P~p~n~~nA~DaVv 299 (517)
T KOG1553|consen 242 GQDLVICFEGNAG-------FYEVGVMN--TPAQLGYSVLGWNH---------P-GFAGSTGL---PYPVNTLNAADAVV 299 (517)
T ss_pred CceEEEEecCCcc-------ceEeeeec--ChHHhCceeeccCC---------C-CccccCCC---CCcccchHHHHHHH
Confidence 4789998888654 78877431 11123333345665 6 66666553 45667766665555
Q ss_pred HHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCC
Q 010508 206 DFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNG 264 (508)
Q Consensus 206 ~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg 264 (508)
+|-.+- =.|+..++.|.|.|-||.-+...|+-. -++|++++-.-
T Consensus 300 QfAI~~----Lgf~~edIilygWSIGGF~~~waAs~Y-----------PdVkavvLDAt 343 (517)
T KOG1553|consen 300 QFAIQV----LGFRQEDIILYGWSIGGFPVAWAASNY-----------PDVKAVVLDAT 343 (517)
T ss_pred HHHHHH----cCCCccceEEEEeecCCchHHHHhhcC-----------CCceEEEeecc
Confidence 544333 267888999999999998887777654 35788876433
No 134
>PLN02324 triacylglycerol lipase
Probab=74.42 E-value=7.9 Score=41.20 Aligned_cols=70 Identities=19% Similarity=0.183 Sum_probs=46.4
Q ss_pred ChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhccccc-----ccceEeeeeeeccCCCC
Q 010508 196 DEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEK-----QGIHINLKGFAIGNGLT 266 (508)
Q Consensus 196 ~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~-----~~~~inLkGi~IGNg~~ 266 (508)
+-..+-+++.+.|+...+++|.. ...+.|+|||.||-.+...|..|.+..... ....+++.-+..|.|-+
T Consensus 191 ~k~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRV 265 (415)
T PLN02324 191 DTTSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRI 265 (415)
T ss_pred chhHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCc
Confidence 33456778888899988888753 236999999999988888888886532110 11233455555666555
No 135
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=74.11 E-value=4.2 Score=38.71 Aligned_cols=101 Identities=15% Similarity=0.265 Sum_probs=69.5
Q ss_pred CCEEEEECCCCCchhhh----hhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHH
Q 010508 127 DPVVIWLTGGPGCSSEL----ALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSN 202 (508)
Q Consensus 127 dPlvlWlnGGPGcSS~~----glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~ 202 (508)
|-++|.+.|--|...+. ..+...| ..|+=||.+ .|--. ..+.+++|.
T Consensus 2 Dt~~v~~SGDgGw~~~d~~~a~~l~~~G--------------------~~VvGvdsl-----~Yfw~----~rtP~~~a~ 52 (192)
T PF06057_consen 2 DTLAVFFSGDGGWRDLDKQIAEALAKQG--------------------VPVVGVDSL-----RYFWS----ERTPEQTAA 52 (192)
T ss_pred CEEEEEEeCCCCchhhhHHHHHHHHHCC--------------------CeEEEechH-----HHHhh----hCCHHHHHH
Confidence 45778888877775543 3333333 245555554 33211 256788999
Q ss_pred HHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCC
Q 010508 203 DLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGL 265 (508)
Q Consensus 203 d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 265 (508)
|+-+.++.+.++ +..+.+.|+|-|+|.-.+|.+..++...- +-.++++++-.+-
T Consensus 53 Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~------r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 53 DLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAAL------RARVAQVVLLSPS 106 (192)
T ss_pred HHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHH------HhheeEEEEeccC
Confidence 999988888774 66789999999999999999999997753 2346777764333
No 136
>KOG3101 consensus Esterase D [General function prediction only]
Probab=73.38 E-value=34 Score=33.30 Aligned_cols=117 Identities=19% Similarity=0.289 Sum_probs=56.0
Q ss_pred CCCCccEEEEEEeccCCC---CCCEEEEECCCCCchhh----hhhh----hcCCCeEEeCCC-----cccccCCCCCCCc
Q 010508 108 HSQSARMFYFFFESRNNK---SDPVVIWLTGGPGCSSE----LALF----YENGPFHIANNL-----SLVWNDYGWDKAS 171 (508)
Q Consensus 108 ~~~~~~lFy~ffes~~~~---~dPlvlWlnGGPGcSS~----~glf----~E~GP~~i~~~~-----~l~~N~~sW~k~a 171 (508)
++.+..|=|-.|--...+ .-|++.||.|= -|.-. -.-| .+.|=..+.++. .+.-.+-||+-
T Consensus 22 ~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGL-TCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDF-- 98 (283)
T KOG3101|consen 22 NTLKCSMTFGVYLPPDAPRGKRCPVLFYLSGL-TCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDF-- 98 (283)
T ss_pred cccccceEEEEecCCCcccCCcCceEEEecCC-cccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccc--
Confidence 344567766655443333 57999999974 45221 1112 245555566542 23334457753
Q ss_pred eEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHH-hCCCCCCCCEEEEcccccccch
Q 010508 172 NLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFA-EHPQYAKNDFYITGESYAGHYI 235 (508)
Q Consensus 172 nvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~-~~Pe~~~~~~yI~GESYgG~yv 235 (508)
-.|.||=-..+......+ -..-+.+.+-|-+-+. .+-.+-..+.-|+|||+|||=+
T Consensus 99 -------G~GAGFYvnAt~epw~~~-yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGA 155 (283)
T KOG3101|consen 99 -------GQGAGFYVNATQEPWAKH-YRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGA 155 (283)
T ss_pred -------cCCceeEEecccchHhhh-hhHHHHHHHHHHHHhccccccccchhcceeccccCCCce
Confidence 457777332222221111 1111222222222222 1112223458899999999743
No 137
>PLN02761 lipase class 3 family protein
Probab=73.16 E-value=8.4 Score=42.10 Aligned_cols=71 Identities=10% Similarity=0.062 Sum_probs=46.9
Q ss_pred ChhhhHHHHHHHHHHHHHhCCCC-C--CCCEEEEcccccccchHHHHHHHHhcccc---cccceEeeeeeeccCCCC
Q 010508 196 DEEGVSNDLYDFLQAFFAEHPQY-A--KNDFYITGESYAGHYIPAFASRVHKGNKE---KQGIHINLKGFAIGNGLT 266 (508)
Q Consensus 196 ~~~~~a~d~~~fL~~F~~~~Pe~-~--~~~~yI~GESYgG~yvP~lA~~i~~~n~~---~~~~~inLkGi~IGNg~~ 266 (508)
+...+.+++...++.....+|.. + .-.++|+|||.||-.+-..|..|...+-. .....+++.-+..|.|-+
T Consensus 266 ~k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRV 342 (527)
T PLN02761 266 SSFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRV 342 (527)
T ss_pred cchhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCc
Confidence 33456788888899988887643 2 23599999999998888778777653211 012234455666666655
No 138
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=72.02 E-value=45 Score=32.59 Aligned_cols=82 Identities=23% Similarity=0.131 Sum_probs=49.5
Q ss_pred EEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccc
Q 010508 173 LLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGI 252 (508)
Q Consensus 173 vLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~ 252 (508)
.+-+|= .|-|-|-++=..+ +-..-|+|+...+|.|-. ....==.|.|||=||--+--+|.++++ ...
T Consensus 65 ~fRfDF-~GnGeS~gsf~~G---n~~~eadDL~sV~q~~s~----~nr~v~vi~gHSkGg~Vvl~ya~K~~d-----~~~ 131 (269)
T KOG4667|consen 65 AFRFDF-SGNGESEGSFYYG---NYNTEADDLHSVIQYFSN----SNRVVPVILGHSKGGDVVLLYASKYHD-----IRN 131 (269)
T ss_pred EEEEEe-cCCCCcCCccccC---cccchHHHHHHHHHHhcc----CceEEEEEEeecCccHHHHHHHHhhcC-----chh
Confidence 444554 5888776542211 212345898887776533 111123678999999999999999876 123
Q ss_pred eEeeeeeeccCCCCC
Q 010508 253 HINLKGFAIGNGLTD 267 (508)
Q Consensus 253 ~inLkGi~IGNg~~d 267 (508)
-||+.|=..+-+.+.
T Consensus 132 viNcsGRydl~~~I~ 146 (269)
T KOG4667|consen 132 VINCSGRYDLKNGIN 146 (269)
T ss_pred eEEcccccchhcchh
Confidence 577776555444443
No 139
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=70.84 E-value=12 Score=40.25 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=29.9
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHH
Q 010508 199 GVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASR 241 (508)
Q Consensus 199 ~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~ 241 (508)
+..+++.+.+++.+++. ..+++.|.|||.||.++-.++..
T Consensus 143 ~~~~~Lk~lIe~~~~~~---g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 143 ETMDGLKKKLETVYKAS---GGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHHHHc---CCCCEEEEEECHhHHHHHHHHHH
Confidence 45677777788777754 35789999999999777666544
No 140
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=70.27 E-value=6.7 Score=37.86 Aligned_cols=43 Identities=12% Similarity=0.147 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHh
Q 010508 200 VSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHK 244 (508)
Q Consensus 200 ~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~ 244 (508)
+-.|+.++...|++.++ .+|||.|+|||=|+..+-.|-++..+
T Consensus 76 ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~e~~~ 118 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLKEEIA 118 (207)
T ss_pred hHHHHHHHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHHHHhc
Confidence 45788899999999865 47899999999999666555554443
No 141
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=70.13 E-value=43 Score=36.43 Aligned_cols=43 Identities=21% Similarity=0.336 Sum_probs=32.7
Q ss_pred ChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHH
Q 010508 196 DEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRV 242 (508)
Q Consensus 196 ~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i 242 (508)
+.+++-.|+.+|+++-=.+++.-...+++.+|-||.| +||+..
T Consensus 147 Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsG----sLsAW~ 189 (514)
T KOG2182|consen 147 SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSG----SLSAWF 189 (514)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchh----HHHHHH
Confidence 4567778888888877777865555699999999999 555444
No 142
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=69.44 E-value=6.8 Score=38.91 Aligned_cols=60 Identities=20% Similarity=0.223 Sum_probs=44.4
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
..+|||++|..|-++|+.-..+..+..+ . .....+|+||||--..--|+ -.
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k---------~-------------------~~epl~v~g~gH~~~~~~~~-yi 242 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCK---------E-------------------KVEPLWVKGAGHNDIELYPE-YI 242 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhcc---------c-------------------cCCCcEEecCCCcccccCHH-HH
Confidence 4699999999999999998877665542 0 12337899999998777666 45
Q ss_pred HHHHHHHcC
Q 010508 486 QMLQSWMQG 494 (508)
Q Consensus 486 ~ml~~fl~g 494 (508)
+.+++|+..
T Consensus 243 ~~l~~f~~~ 251 (258)
T KOG1552|consen 243 EHLRRFISS 251 (258)
T ss_pred HHHHHHHHH
Confidence 566667754
No 143
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=69.42 E-value=8.8 Score=37.62 Aligned_cols=67 Identities=9% Similarity=0.106 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChhh
Q 010508 200 VSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAI 270 (508)
Q Consensus 200 ~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~ 270 (508)
.+..+.+||+..... -...+++|.+||.|+.-+-..-..+...... .+..-+|..+++-+|-+|...
T Consensus 75 s~~~l~~~L~~L~~~---~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~-~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 75 SGPALARFLRDLARA---PGIKRIHILAHSMGNRVLLEALRQLASEGER-PDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred HHHHHHHHHHHHHhc---cCCceEEEEEeCchHHHHHHHHHHHHhcccc-hhhHhhhheEEEECCCCCHHH
Confidence 445555555544332 1356899999999998777666666554321 012237888898888877644
No 144
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=68.34 E-value=8.1 Score=39.83 Aligned_cols=56 Identities=20% Similarity=0.208 Sum_probs=36.7
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccC-hHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQ-PKAS 484 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~Dq-P~~a 484 (508)
..+||+-.|-.|.+||..++-...++|. + + + .....+..||-.+.+. -++.
T Consensus 262 ~~pvl~~~gl~D~~cPP~t~fA~yN~i~--~-------~-K------------------~l~vyp~~~He~~~~~~~~~~ 313 (320)
T PF05448_consen 262 KCPVLFSVGLQDPVCPPSTQFAAYNAIP--G-------P-K------------------ELVVYPEYGHEYGPEFQEDKQ 313 (320)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHCC----S-------S-E------------------EEEEETT--SSTTHHHHHHHH
T ss_pred CCCEEEEEecCCCCCCchhHHHHHhccC--C-------C-e------------------eEEeccCcCCCchhhHHHHHH
Confidence 5899999999999999999999998884 1 1 1 2377889999887665 5555
Q ss_pred HHHHH
Q 010508 485 LQMLQ 489 (508)
Q Consensus 485 ~~ml~ 489 (508)
++.|+
T Consensus 314 ~~~l~ 318 (320)
T PF05448_consen 314 LNFLK 318 (320)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 44443
No 145
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=68.15 E-value=16 Score=35.71 Aligned_cols=87 Identities=17% Similarity=0.067 Sum_probs=53.9
Q ss_pred eEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhccccccc
Q 010508 172 NLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQG 251 (508)
Q Consensus 172 nvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~ 251 (508)
+...|+-|.+.+-=-+-....+..+..+-++.+.+.++.+.. ..+++.|+|.|-|+.-+-...+++.+.....
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~-- 76 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPP-- 76 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC--
Confidence 455667776433211111112223444555677777776655 5789999999999988877777776642211
Q ss_pred ceEeeeeeeccCCCC
Q 010508 252 IHINLKGFAIGNGLT 266 (508)
Q Consensus 252 ~~inLkGi~IGNg~~ 266 (508)
.-+++-+++||+.-
T Consensus 77 -~~~l~fVl~gnP~r 90 (225)
T PF08237_consen 77 -PDDLSFVLIGNPRR 90 (225)
T ss_pred -cCceEEEEecCCCC
Confidence 14688899998853
No 146
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=67.77 E-value=21 Score=38.09 Aligned_cols=22 Identities=14% Similarity=0.149 Sum_probs=16.0
Q ss_pred CCEEEEcccccccchHHHHHHH
Q 010508 221 NDFYITGESYAGHYIPAFASRV 242 (508)
Q Consensus 221 ~~~yI~GESYgG~yvP~lA~~i 242 (508)
....|+|.|+||.-.-+++.+-
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~ 309 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHW 309 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhC
Confidence 4689999999996555555443
No 147
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=65.13 E-value=56 Score=33.85 Aligned_cols=114 Identities=17% Similarity=0.196 Sum_probs=63.6
Q ss_pred cCCCCCCEEEEECCCCCch--hhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhh
Q 010508 122 RNNKSDPVVIWLTGGPGCS--SELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEG 199 (508)
Q Consensus 122 ~~~~~dPlvlWlnGGPGcS--S~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~ 199 (508)
..++..|+||-++|=-|.| ...-.+.| .+...- ..++-.+- .|.|.+-.....-+ ++-
T Consensus 70 p~~~~~P~vVl~HGL~G~s~s~y~r~L~~----------~~~~rg------~~~Vv~~~-Rgcs~~~n~~p~~y-h~G-- 129 (345)
T COG0429 70 PRAAKKPLVVLFHGLEGSSNSPYARGLMR----------ALSRRG------WLVVVFHF-RGCSGEANTSPRLY-HSG-- 129 (345)
T ss_pred ccccCCceEEEEeccCCCCcCHHHHHHHH----------HHHhcC------CeEEEEec-ccccCCcccCccee-ccc--
Confidence 3445779999999966663 32222222 122111 24555554 68777654433322 221
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCC
Q 010508 200 VSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGL 265 (508)
Q Consensus 200 ~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 265 (508)
..+|+..||..--+++| .+++|.+|-|.||. ++|..+.+.- +... ...++++-+|+
T Consensus 130 ~t~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg---~d~~-~~aa~~vs~P~ 185 (345)
T COG0429 130 ETEDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEG---DDLP-LDAAVAVSAPF 185 (345)
T ss_pred chhHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhc---cCcc-cceeeeeeCHH
Confidence 22677666654444455 68999999999994 4566665532 2222 25666665555
No 148
>PLN02310 triacylglycerol lipase
Probab=63.46 E-value=14 Score=39.19 Aligned_cols=64 Identities=11% Similarity=0.049 Sum_probs=41.4
Q ss_pred hhHHHHHHHHHHHHHhCCCC-CCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCC
Q 010508 199 GVSNDLYDFLQAFFAEHPQY-AKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTD 267 (508)
Q Consensus 199 ~~a~d~~~fL~~F~~~~Pe~-~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~d 267 (508)
.+.+++.+.++.....+++- ....+.|+|||.||-.+-..|..|.... ..+++.-+..|.|-+.
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVG 250 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCcc
Confidence 45567777777777766532 2346999999999988877776665421 1234555666666653
No 149
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=61.88 E-value=18 Score=36.58 Aligned_cols=35 Identities=20% Similarity=0.426 Sum_probs=29.9
Q ss_pred hhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccc
Q 010508 198 EGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAG 232 (508)
Q Consensus 198 ~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG 232 (508)
.+++.-|++.+.......|+=..-++|++|||-|.
T Consensus 86 ~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa 120 (289)
T PF10081_consen 86 REAARALFEAVYARWSTLPEDRRPKLYLYGESLGA 120 (289)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccc
Confidence 45677888999999999998877789999999986
No 150
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=61.44 E-value=14 Score=34.34 Aligned_cols=43 Identities=9% Similarity=0.220 Sum_probs=34.2
Q ss_pred ceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCcc
Q 010508 407 IRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMD 479 (508)
Q Consensus 407 irVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~D 479 (508)
++.+++.++.|..||+.-++++.+.++ ..++.+.++||+-..+
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~------------------------------a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG------------------------------AELIILGGGGHFNAAS 157 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT-------------------------------EEEEETS-TTSSGGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC------------------------------CCeEECCCCCCccccc
Confidence 455999999999999999999998883 4569999999997653
No 151
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=60.58 E-value=12 Score=36.02 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=29.5
Q ss_pred HHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHH
Q 010508 208 LQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVH 243 (508)
Q Consensus 208 L~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~ 243 (508)
-.+|++.+|+-..+.+-|.|-|.||-++-.+|.+..
T Consensus 9 Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~ 44 (213)
T PF08840_consen 9 AIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP 44 (213)
T ss_dssp HHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS
T ss_pred HHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC
Confidence 456889999999899999999999988888888763
No 152
>PRK14567 triosephosphate isomerase; Provisional
Probab=59.36 E-value=20 Score=35.73 Aligned_cols=69 Identities=19% Similarity=0.249 Sum_probs=49.2
Q ss_pred CCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeee
Q 010508 180 TGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGF 259 (508)
Q Consensus 180 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi 259 (508)
+|||-+-+ .+.++++..++++++.++-+-....+=|. |||---|.=+..+.+. -++.|+
T Consensus 170 IGTG~~as----------~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~--------~diDG~ 228 (253)
T PRK14567 170 IGTGVVAS----------LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSL--------PDVDGG 228 (253)
T ss_pred hCCCCCCC----------HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcC--------CCCCEE
Confidence 68876432 23578899999999876421112233333 9999999999999874 358999
Q ss_pred eccCCCCChh
Q 010508 260 AIGNGLTDPA 269 (508)
Q Consensus 260 ~IGNg~~dp~ 269 (508)
.||.+-++|.
T Consensus 229 LVGgasL~~~ 238 (253)
T PRK14567 229 LIGGASLKAA 238 (253)
T ss_pred EeehhhhcHH
Confidence 9999998765
No 153
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=59.00 E-value=84 Score=31.92 Aligned_cols=92 Identities=14% Similarity=0.093 Sum_probs=51.1
Q ss_pred hhhhhcCCceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCc
Q 010508 399 IPTLLEDGIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPM 478 (508)
Q Consensus 399 i~~LL~~girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~ 478 (508)
|..|=++.+||||..|-.|.++--.-..+..... .+.+-|......+=....++.=-+.+...-.-+.|.+-||+..=
T Consensus 205 I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f--~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK 282 (297)
T PF06342_consen 205 IDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF--KGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHFQQK 282 (297)
T ss_pred HHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh--CCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChHHhH
Confidence 4455566799999999999888766665655433 33333322111100000000000011123334788999999999
Q ss_pred cChHHHHHHHHHHH
Q 010508 479 DQPKASLQMLQSWM 492 (508)
Q Consensus 479 DqP~~a~~ml~~fl 492 (508)
.||+-.-+.+...+
T Consensus 283 ~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 283 FRADLIAEAIKKMF 296 (297)
T ss_pred HHHHHHHHHHHHhh
Confidence 99987777666543
No 154
>COG0627 Predicted esterase [General function prediction only]
Probab=58.94 E-value=20 Score=36.88 Aligned_cols=113 Identities=21% Similarity=0.218 Sum_probs=59.0
Q ss_pred CCCEEEEECCCCCchhhhhhhhcCCCeEEeCC---Cccccc-CCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhH
Q 010508 126 SDPVVIWLTGGPGCSSELALFYENGPFHIANN---LSLVWN-DYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVS 201 (508)
Q Consensus 126 ~dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~---~~l~~N-~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a 201 (508)
.+.-|+|+.+|..|.. -.++..++++=..+ -.++-+ ---|....++--|+ |+|.|.|+=.+-..-..... .
T Consensus 52 ~~ipV~~~l~G~t~~~--~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~~--~ 126 (316)
T COG0627 52 RDIPVLYLLSGLTCNE--PNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWASG--P 126 (316)
T ss_pred CCCCEEEEeCCCCCCC--CceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCccccC--c
Confidence 4445566666788875 33555555543221 111111 22344445555566 48999998433211110000 1
Q ss_pred HHHHHHHH-----HHHHhCCCCCC-CCEEEEcccccccchHHHHHHHH
Q 010508 202 NDLYDFLQ-----AFFAEHPQYAK-NDFYITGESYAGHYIPAFASRVH 243 (508)
Q Consensus 202 ~d~~~fL~-----~F~~~~Pe~~~-~~~yI~GESYgG~yvP~lA~~i~ 243 (508)
-+.+.||. .+.+.||--.. ..-.|+|+|+||+=+-.+|.+-.
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~p 174 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHP 174 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCc
Confidence 23444432 45555653321 35789999999987777776543
No 155
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=56.92 E-value=59 Score=32.49 Aligned_cols=88 Identities=15% Similarity=0.206 Sum_probs=54.0
Q ss_pred CEEEEECCCCCch-hhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHH
Q 010508 128 PVVIWLTGGPGCS-SELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYD 206 (508)
Q Consensus 128 PlvlWlnGGPGcS-S~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~ 206 (508)
|.++|++++=|.- +...|-.+.+|- .-++-++.| |-|. ... ...+.++.++...+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~------------------~~v~~l~a~-g~~~----~~~-~~~~l~~~a~~yv~ 56 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL------------------LPVYGLQAP-GYGA----GEQ-PFASLDDMAAAYVA 56 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC------------------ceeeccccC-cccc----ccc-ccCCHHHHHHHHHH
Confidence 5678888877663 334444444442 235566666 4432 111 12344555555555
Q ss_pred HHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhc
Q 010508 207 FLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKG 245 (508)
Q Consensus 207 fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~ 245 (508)
.|+ +..|+- |.+|.|.|+||.-+=.+|.++..+
T Consensus 57 ~Ir---~~QP~G---Py~L~G~S~GG~vA~evA~qL~~~ 89 (257)
T COG3319 57 AIR---RVQPEG---PYVLLGWSLGGAVAFEVAAQLEAQ 89 (257)
T ss_pred HHH---HhCCCC---CEEEEeeccccHHHHHHHHHHHhC
Confidence 444 556653 999999999998888888888765
No 156
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=56.90 E-value=23 Score=34.36 Aligned_cols=62 Identities=24% Similarity=0.347 Sum_probs=47.2
Q ss_pred ceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChH---H
Q 010508 407 IRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPK---A 483 (508)
Q Consensus 407 irVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~---~ 483 (508)
.++|+.+|..|.++|....+....... . .+...+.+.+++|....+.+. +
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~--------~-------------------~~~~~~~~~~~~H~~~~~~~~~~~~ 285 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAAR--------E-------------------RPKKLLFVPGGGHIDLYDNPPAVEQ 285 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhc--------c-------------------CCceEEEecCCccccccCccHHHHH
Confidence 799999999999999888888776642 0 034558889999999986666 5
Q ss_pred HHHHHHHHHcCC
Q 010508 484 SLQMLQSWMQGK 495 (508)
Q Consensus 484 a~~ml~~fl~g~ 495 (508)
++.-+.+|+...
T Consensus 286 ~~~~~~~f~~~~ 297 (299)
T COG1073 286 ALDKLAEFLERH 297 (299)
T ss_pred HHHHHHHHHHHh
Confidence 677777777543
No 157
>PLN02408 phospholipase A1
Probab=55.72 E-value=17 Score=38.17 Aligned_cols=45 Identities=11% Similarity=0.093 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHh
Q 010508 199 GVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHK 244 (508)
Q Consensus 199 ~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~ 244 (508)
.+.+++.+-++...+++|.. ...++|+|||.||-.+-..|..|..
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHH
Confidence 46678888889988888864 2359999999999888877777765
No 158
>PLN00413 triacylglycerol lipase
Probab=55.68 E-value=13 Score=40.14 Aligned_cols=39 Identities=21% Similarity=0.438 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHh
Q 010508 203 DLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHK 244 (508)
Q Consensus 203 d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~ 244 (508)
++.+.|++.++++|++ +++|+|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHHh
Confidence 5667788888888754 69999999999888877766653
No 159
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=55.49 E-value=25 Score=34.63 Aligned_cols=64 Identities=19% Similarity=0.226 Sum_probs=39.9
Q ss_pred ceEEEEeCCCCCCcccccCCCCCCCC-hhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHH
Q 010508 171 SNLLFVDQPTGTGFSYTSDKDDIRHD-EEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAF 238 (508)
Q Consensus 171 anvLyiDqPvGtGfSy~~~~~~~~~~-~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~l 238 (508)
+.||-.|. .|+|-|-....+..... .|=+..|+-..|..-=+.- ...|+|..||||||+..=-+
T Consensus 58 f~Vlt~dy-RG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~---~~~P~y~vgHS~GGqa~gL~ 122 (281)
T COG4757 58 FEVLTFDY-RGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKAL---PGHPLYFVGHSFGGQALGLL 122 (281)
T ss_pred ceEEEEec-ccccCCCccccccCccchhhhhhcchHHHHHHHHhhC---CCCceEEeeccccceeeccc
Confidence 47888887 79999886544433222 1223456655554333333 35689999999999765433
No 160
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=54.78 E-value=16 Score=35.52 Aligned_cols=64 Identities=20% Similarity=0.217 Sum_probs=46.1
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
.++.|-+.|+.|.+++..-.+..++... .+ .+..+..||+||.-.| ..
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~--------~a----------------------~vl~HpggH~VP~~~~--~~ 210 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFK--------DA----------------------TVLEHPGGHIVPNKAK--YK 210 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcC--------CC----------------------eEEecCCCccCCCchH--HH
Confidence 5799999999999999998888776642 11 2888999999998763 34
Q ss_pred HHHHHHHcCCcCCCcc
Q 010508 486 QMLQSWMQGKLAMTWT 501 (508)
Q Consensus 486 ~ml~~fl~g~~~~~~~ 501 (508)
+=+.+||+.....-|+
T Consensus 211 ~~i~~fi~~~~~~~~e 226 (230)
T KOG2551|consen 211 EKIADFIQSFLQEESE 226 (230)
T ss_pred HHHHHHHHHHHHhhhh
Confidence 4455566554444443
No 161
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=54.63 E-value=18 Score=34.89 Aligned_cols=48 Identities=10% Similarity=0.070 Sum_probs=34.3
Q ss_pred hhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcc
Q 010508 198 EGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGN 246 (508)
Q Consensus 198 ~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n 246 (508)
+..++.+.+.|.+..+..+.- .+++-+.|||.||.++=+....+.+.+
T Consensus 56 ~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 56 DVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred HHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 446677777777777655432 468999999999988876666665543
No 162
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=51.90 E-value=48 Score=31.41 Aligned_cols=61 Identities=25% Similarity=0.152 Sum_probs=37.4
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccC-----CccC
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMV-----PMDQ 480 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmv-----P~Dq 480 (508)
..+||+..|+.|..++....+.+.+.|+=.+ ..+.+.+..|++|== +..+
T Consensus 145 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~-------------------------~~~~~~~y~ga~HgF~~~~~~~~~ 199 (218)
T PF01738_consen 145 KAPVLILFGENDPFFPPEEVEALEEALKAAG-------------------------VDVEVHVYPGAGHGFANPSRPPYD 199 (218)
T ss_dssp -S-EEEEEETT-TTS-HHHHHHHHHHHHCTT-------------------------TTEEEEEETT--TTTTSTTSTT--
T ss_pred CCCEeecCccCCCCCChHHHHHHHHHHHhcC-------------------------CcEEEEECCCCcccccCCCCcccC
Confidence 5899999999999999999888888884111 245668888899962 2335
Q ss_pred hHHHHHHHHHH
Q 010508 481 PKASLQMLQSW 491 (508)
Q Consensus 481 P~~a~~ml~~f 491 (508)
++++.+..++.
T Consensus 200 ~~aa~~a~~~~ 210 (218)
T PF01738_consen 200 PAAAEDAWQRT 210 (218)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55655544443
No 163
>PLN02162 triacylglycerol lipase
Probab=50.40 E-value=20 Score=38.75 Aligned_cols=39 Identities=18% Similarity=0.347 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHh
Q 010508 203 DLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHK 244 (508)
Q Consensus 203 d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~ 244 (508)
.+.+.|++.+.++|.+ +++|+|||.||-.+-..|..+..
T Consensus 263 ~I~~~L~~lL~k~p~~---kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 263 TIRQMLRDKLARNKNL---KYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHhCCCc---eEEEEecChHHHHHHHHHHHHHH
Confidence 4555677777777754 69999999999877666665543
No 164
>PRK14566 triosephosphate isomerase; Provisional
Probab=49.69 E-value=34 Score=34.28 Aligned_cols=59 Identities=17% Similarity=0.332 Sum_probs=44.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChh
Q 010508 200 VSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPA 269 (508)
Q Consensus 200 ~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 269 (508)
.+++++.|+++++.+.-.-..+.+=|. |||---|.-+..|... -++.|++||..-++|.
T Consensus 190 ~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~--------~dIDG~LVGgASL~~~ 248 (260)
T PRK14566 190 QAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQ--------PDVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcC--------CCCCeEEechHhcCHH
Confidence 478999999999975311112233343 9999999999999875 3589999999998874
No 165
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=49.59 E-value=27 Score=34.10 Aligned_cols=38 Identities=21% Similarity=0.375 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHh
Q 010508 203 DLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHK 244 (508)
Q Consensus 203 d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~ 244 (508)
...++|+...+++++ +++|+|||=||..+-+.|..+.+
T Consensus 70 ~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccH
Confidence 445667777776654 59999999999888877777544
No 166
>PLN02934 triacylglycerol lipase
Probab=49.57 E-value=22 Score=38.78 Aligned_cols=40 Identities=23% Similarity=0.340 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHh
Q 010508 202 NDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHK 244 (508)
Q Consensus 202 ~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~ 244 (508)
..+...|+++++++|.+ +++|+|||-||-.+-..|..+..
T Consensus 305 ~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHH
Confidence 45667788888888864 69999999999887777666543
No 167
>COG3596 Predicted GTPase [General function prediction only]
Probab=49.12 E-value=24 Score=35.60 Aligned_cols=59 Identities=27% Similarity=0.298 Sum_probs=36.8
Q ss_pred CCCEEEEECCCCCc--hhhh-hhhhcCC-CeEEeCCCcccccCCCCCCC--ceEEEEeCCCCCCccc
Q 010508 126 SDPVVIWLTGGPGC--SSEL-ALFYENG-PFHIANNLSLVWNDYGWDKA--SNLLFVDQPTGTGFSY 186 (508)
Q Consensus 126 ~dPlvlWlnGGPGc--SS~~-glf~E~G-P~~i~~~~~l~~N~~sW~k~--anvLyiDqPvGtGfSy 186 (508)
..||.+-+.|--|| ||++ ++|+.++ |..--. -....-.+.|... -||..+|.| |.|=+-
T Consensus 37 ~~pvnvLi~G~TG~GKSSliNALF~~~~~~v~~vg-~~t~~~~~~~~~~~~~~l~lwDtP-G~gdg~ 101 (296)
T COG3596 37 KEPVNVLLMGATGAGKSSLINALFQGEVKEVSKVG-VGTDITTRLRLSYDGENLVLWDTP-GLGDGK 101 (296)
T ss_pred cCceeEEEecCCCCcHHHHHHHHHhccCceeeecc-cCCCchhhHHhhccccceEEecCC-Ccccch
Confidence 68999999997777 8875 7886443 332111 0111122233332 599999999 988654
No 168
>PLN03037 lipase class 3 family protein; Provisional
Probab=48.36 E-value=38 Score=37.19 Aligned_cols=46 Identities=15% Similarity=0.154 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHHHhCCCC-CCCCEEEEcccccccchHHHHHHHHhc
Q 010508 200 VSNDLYDFLQAFFAEHPQY-AKNDFYITGESYAGHYIPAFASRVHKG 245 (508)
Q Consensus 200 ~a~d~~~fL~~F~~~~Pe~-~~~~~yI~GESYgG~yvP~lA~~i~~~ 245 (508)
+.+++.+-++...+.+++. ....++|+|||.||-.+-..|..|...
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~ 342 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARS 342 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHh
Confidence 4456777777777776643 234699999999998887777777654
No 169
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=48.04 E-value=33 Score=35.59 Aligned_cols=58 Identities=19% Similarity=0.238 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCC
Q 010508 203 DLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLT 266 (508)
Q Consensus 203 d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~ 266 (508)
.+.+-++.-...+| +-.++++|||-||-++...|..|...... ....++=+-.|-|-+
T Consensus 156 ~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 156 GLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCc
Confidence 34444555555666 55799999999999999999999876432 123444444554443
No 170
>PLN02847 triacylglycerol lipase
Probab=47.20 E-value=32 Score=38.38 Aligned_cols=61 Identities=11% Similarity=0.093 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccC-CCCChh
Q 010508 201 SNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGN-GLTDPA 269 (508)
Q Consensus 201 a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGN-g~~dp~ 269 (508)
.+.+...|++-+..+|.| ++.|+|||.||-.+..++..+.++.. .-++.-++.|. |+++..
T Consensus 234 ~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~-----fssi~CyAFgPp~cvS~e 295 (633)
T PLN02847 234 AKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKE-----FSSTTCVTFAPAACMTWD 295 (633)
T ss_pred HHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCC-----CCCceEEEecCchhcCHH
Confidence 334444555666677766 69999999999888777665543221 22455666664 344443
No 171
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=46.17 E-value=54 Score=32.69 Aligned_cols=105 Identities=18% Similarity=0.255 Sum_probs=63.6
Q ss_pred CCCEEEEECCCCCc-hhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHH
Q 010508 126 SDPVVIWLTGGPGC-SSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDL 204 (508)
Q Consensus 126 ~dPlvlWlnGGPGc-SS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~ 204 (508)
..+.+|+++|--.- .-+..+|.+.+= .=..|+.=.|- .|-|.|-++.... +.-.-.+..
T Consensus 59 ~~~~lly~hGNa~Dlgq~~~~~~~l~~----------------~ln~nv~~~DY-SGyG~S~G~psE~---n~y~Di~av 118 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQMVELFKELSI----------------FLNCNVVSYDY-SGYGRSSGKPSER---NLYADIKAV 118 (258)
T ss_pred cceEEEEcCCcccchHHHHHHHHHHhh----------------cccceEEEEec-ccccccCCCcccc---cchhhHHHH
Confidence 46999999986211 134455555322 12357777887 5999998865432 322223344
Q ss_pred HHHHHHHHHhCCCC-CCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCCh
Q 010508 205 YDFLQAFFAEHPQY-AKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDP 268 (508)
Q Consensus 205 ~~fL~~F~~~~Pe~-~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp 268 (508)
|+ |++. .+ +..++.|.|.|-|..---.+|.+. + +.|+++-+|+++-
T Consensus 119 ye----~Lr~--~~g~~~~Iil~G~SiGt~~tv~Lasr~----------~--~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 119 YE----WLRN--RYGSPERIILYGQSIGTVPTVDLASRY----------P--LAAVVLHSPFTSG 165 (258)
T ss_pred HH----HHHh--hcCCCceEEEEEecCCchhhhhHhhcC----------C--cceEEEeccchhh
Confidence 44 4444 34 567899999999974322333321 2 8999998888763
No 172
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=45.64 E-value=23 Score=33.94 Aligned_cols=49 Identities=22% Similarity=0.279 Sum_probs=31.4
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKA 483 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~ 483 (508)
.+++|-..|..|.+++...++...+... . . .-+..++.||.+|...+..
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~--------~--------------------~-~~v~~h~gGH~vP~~~~~~ 209 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFD--------P--------------------D-ARVIEHDGGHHVPRKKEDV 209 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHH--------H--------------------H-EEEEEESSSSS----HHHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhcc--------C--------------------C-cEEEEECCCCcCcCChhhc
Confidence 6899999999999999888877765542 1 1 2378899999999987653
No 173
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=45.53 E-value=16 Score=30.10 Aligned_cols=28 Identities=39% Similarity=0.711 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCCEEEEccccc
Q 010508 202 NDLYDFLQAFFAEHPQYAKNDFYITGESYA 231 (508)
Q Consensus 202 ~d~~~fL~~F~~~~Pe~~~~~~yI~GESYg 231 (508)
-|+|++.+.|+.+| |-.++|.+.|+||+
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~~ 34 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSNA 34 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchHH
Confidence 48999999999885 77789999999994
No 174
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=44.95 E-value=7.4 Score=40.98 Aligned_cols=57 Identities=26% Similarity=0.311 Sum_probs=35.8
Q ss_pred CCCEEEEECCCCCc--hhhhhhhhcCCCeEEeC------CCcccccCCCCCCCceEEEEeCCCCCC
Q 010508 126 SDPVVIWLTGGPGC--SSELALFYENGPFHIAN------NLSLVWNDYGWDKASNLLFVDQPTGTG 183 (508)
Q Consensus 126 ~dPlvlWlnGGPGc--SS~~glf~E~GP~~i~~------~~~l~~N~~sW~k~anvLyiDqPvGtG 183 (508)
+.|+=|=+.|.+|+ ||++-.+-..|+=.-.. ..+..+.+|.--++-||.++|-| |+|
T Consensus 33 ~~~l~IaV~G~sGsGKSSfINalrGl~~~d~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 33 NAPLNIAVTGESGSGKSSFINALRGLGHEDEGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp H--EEEEEEESTTSSHHHHHHHHTT--TTSTTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred cCceEEEEECCCCCCHHHHHHHHhCCCCCCcCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 56888889998888 99988887776621110 23456777888899999999999 887
No 175
>PLN02802 triacylglycerol lipase
Probab=44.07 E-value=42 Score=36.71 Aligned_cols=63 Identities=11% Similarity=0.097 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCC
Q 010508 199 GVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLT 266 (508)
Q Consensus 199 ~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~ 266 (508)
.+.+++.+-++.+++++|.- ...++|+|||.||-.+-..|..|...... .+.+.-+..|.|-+
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRV 371 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRV 371 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCc
Confidence 45678888888888877642 23699999999998888877777653221 12344556666554
No 176
>PLN02429 triosephosphate isomerase
Probab=43.94 E-value=41 Score=34.61 Aligned_cols=69 Identities=14% Similarity=0.239 Sum_probs=49.2
Q ss_pred CCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHh-CCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeee
Q 010508 180 TGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAE-HPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKG 258 (508)
Q Consensus 180 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~-~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkG 258 (508)
+|||-+-+. +.++.+.+++++|+.+ +.+-....+-|. |||---|.-+..+... -++.|
T Consensus 230 IGTGk~as~----------e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~--------~diDG 288 (315)
T PLN02429 230 IGTGKVASP----------QQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE--------EDIDG 288 (315)
T ss_pred hCCCCCCCH----------HHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC--------CCCCE
Confidence 688866321 2467889999999875 322222344444 9999999999888764 46899
Q ss_pred eeccCCCCChh
Q 010508 259 FAIGNGLTDPA 269 (508)
Q Consensus 259 i~IGNg~~dp~ 269 (508)
+.||.+.+++.
T Consensus 289 ~LVGgASL~~~ 299 (315)
T PLN02429 289 FLVGGASLKGP 299 (315)
T ss_pred EEeecceecHH
Confidence 99999998765
No 177
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=43.45 E-value=13 Score=35.23 Aligned_cols=16 Identities=38% Similarity=0.958 Sum_probs=14.2
Q ss_pred CCCEEEEECCCCCchh
Q 010508 126 SDPVVIWLTGGPGCSS 141 (508)
Q Consensus 126 ~dPlvlWlnGGPGcSS 141 (508)
+.|-|||+=|||||.-
T Consensus 6 ~~~~IifVlGGPGsgK 21 (195)
T KOG3079|consen 6 DKPPIIFVLGGPGSGK 21 (195)
T ss_pred cCCCEEEEEcCCCCCc
Confidence 7899999999999944
No 178
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=37.63 E-value=37 Score=32.55 Aligned_cols=56 Identities=23% Similarity=0.289 Sum_probs=36.6
Q ss_pred CCCCcccccCCCCCCCChhhhHHHHHHHHHHHHH-hCCCCCCCCEEEEcccccccchHHHHHHHH
Q 010508 180 TGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFA-EHPQYAKNDFYITGESYAGHYIPAFASRVH 243 (508)
Q Consensus 180 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~-~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~ 243 (508)
.|||-|-++-+.++ .|. +|... ...|.+ +||+-.. +.++|-|+|+..+..+|.+..
T Consensus 69 RgVG~S~G~fD~Gi--GE~---~Da~a-aldW~~~~hp~s~~--~~l~GfSFGa~Ia~~la~r~~ 125 (210)
T COG2945 69 RGVGRSQGEFDNGI--GEL---EDAAA-ALDWLQARHPDSAS--CWLAGFSFGAYIAMQLAMRRP 125 (210)
T ss_pred cccccccCcccCCc--chH---HHHHH-HHHHHHhhCCCchh--hhhcccchHHHHHHHHHHhcc
Confidence 79999998765543 232 23333 334655 5886543 799999999966666666653
No 179
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=36.78 E-value=25 Score=31.29 Aligned_cols=16 Identities=31% Similarity=0.548 Sum_probs=15.0
Q ss_pred CCCCCEEEEECCCCCc
Q 010508 124 NKSDPVVIWLTGGPGC 139 (508)
Q Consensus 124 ~~~dPlvlWlnGGPGc 139 (508)
+|++||||=|+|.||+
T Consensus 49 ~p~KpLVlSfHG~tGt 64 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGT 64 (127)
T ss_pred CCCCCEEEEeecCCCC
Confidence 5699999999999999
No 180
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=35.97 E-value=23 Score=25.20 Aligned_cols=32 Identities=22% Similarity=0.301 Sum_probs=25.2
Q ss_pred CCCChhhhhhhHHHHHhhhcccchhhHHHHHH
Q 010508 264 GLTDPAIQYKEYTEYALNMRLIKQSDYESINK 295 (508)
Q Consensus 264 g~~dp~~q~~~~~~~a~~~glI~~~~~~~i~~ 295 (508)
|.+||.....--.+=|+..|+||++.+..+.+
T Consensus 12 Giidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 12 GIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp SEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 77888877666677799999999998888765
No 181
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=35.67 E-value=1.5e+02 Score=29.79 Aligned_cols=38 Identities=13% Similarity=0.205 Sum_probs=24.6
Q ss_pred CEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCC
Q 010508 222 DFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNG 264 (508)
Q Consensus 222 ~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg 264 (508)
.+.|+|||=||+-+-.++....+ ....+++++++.-+|
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~-----~~~~~~~~ali~lDP 129 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNAS-----SSLDLRFSALILLDP 129 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhcc-----cccccceeEEEEecc
Confidence 59999999999855444443321 123567888887333
No 182
>PRK06762 hypothetical protein; Provisional
Probab=34.00 E-value=29 Score=31.41 Aligned_cols=21 Identities=19% Similarity=0.347 Sum_probs=16.0
Q ss_pred CEEEEECCCCCc--hhhhhhhhc
Q 010508 128 PVVIWLTGGPGC--SSELALFYE 148 (508)
Q Consensus 128 PlvlWlnGGPGc--SS~~glf~E 148 (508)
|.+||+.|.||| |.+...+.+
T Consensus 2 ~~li~i~G~~GsGKST~A~~L~~ 24 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTIAKQLQE 24 (166)
T ss_pred CeEEEEECCCCCCHHHHHHHHHH
Confidence 789999999999 555555543
No 183
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=34.00 E-value=2.2e+02 Score=31.22 Aligned_cols=101 Identities=14% Similarity=0.279 Sum_probs=59.8
Q ss_pred CCCEEEEECCCCCchhhhhhhhc--CC-CeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHH
Q 010508 126 SDPVVIWLTGGPGCSSELALFYE--NG-PFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSN 202 (508)
Q Consensus 126 ~dPlvlWlnGGPGcSS~~glf~E--~G-P~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~ 202 (508)
+-||.|.+.|==..=.+-|.|+. +| ||. ||=|+=+--| ++--.. ++.=+
T Consensus 288 KPPL~VYFSGyR~aEGFEgy~MMk~Lg~PfL--------------------L~~DpRleGG-aFYlGs-------~eyE~ 339 (511)
T TIGR03712 288 KPPLNVYFSGYRPAEGFEGYFMMKRLGAPFL--------------------LIGDPRLEGG-AFYLGS-------DEYEQ 339 (511)
T ss_pred CCCeEEeeccCcccCcchhHHHHHhcCCCeE--------------------Eeeccccccc-eeeeCc-------HHHHH
Confidence 78999999995555555555543 33 774 4444322222 321111 11223
Q ss_pred HHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCC
Q 010508 203 DLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTD 267 (508)
Q Consensus 203 d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~d 267 (508)
.+.+.+++-++.- .|..+++.|.|-|+|..=+-+.++ .+|=.+|+||=|+++
T Consensus 340 ~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga------------~l~P~AIiVgKPL~N 391 (511)
T TIGR03712 340 GIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGA------------KLSPHAIIVGKPLVN 391 (511)
T ss_pred HHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhcc------------cCCCceEEEcCcccc
Confidence 4444555555543 688999999999999633333333 345678888888875
No 184
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=33.92 E-value=44 Score=35.35 Aligned_cols=24 Identities=13% Similarity=0.133 Sum_probs=19.5
Q ss_pred CCCEEEEcccccccchHHHHHHHH
Q 010508 220 KNDFYITGESYAGHYIPAFASRVH 243 (508)
Q Consensus 220 ~~~~yI~GESYgG~yvP~lA~~i~ 243 (508)
++++.|.|||+||.++-.+-....
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhcc
Confidence 789999999999977776666553
No 185
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=33.75 E-value=43 Score=32.14 Aligned_cols=48 Identities=21% Similarity=0.236 Sum_probs=28.5
Q ss_pred CceEEEEeecCcccCchhhHH-HHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccC
Q 010508 406 GIRVLIYAGEYDLICNWLGNS-KWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMV 476 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~-~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmv 476 (508)
+-+||+.+|..|.+-|..... ..++.|+=.+.. -+++.+..++|||++
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~-----------------------~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAAGFP-----------------------HNVEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT----------------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCC-----------------------CcceEEEcCCCCcee
Confidence 679999999999999877654 555666422110 156778999999996
No 186
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=33.17 E-value=2.3e+02 Score=31.05 Aligned_cols=31 Identities=13% Similarity=0.168 Sum_probs=19.0
Q ss_pred HHHHHHHhCCCCCCCCEEEEcccccccchHHH
Q 010508 207 FLQAFFAEHPQYAKNDFYITGESYAGHYIPAF 238 (508)
Q Consensus 207 fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~l 238 (508)
.+++....|-. -.+++=|+|||-|+.-|-.+
T Consensus 167 WV~~NIe~FGG-Dp~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 167 WVRDNIEAFGG-DPQNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHhCC-CccceEEeeccchHHHHHHh
Confidence 34455554421 23479999999998655443
No 187
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=32.77 E-value=1.1e+02 Score=28.78 Aligned_cols=66 Identities=15% Similarity=0.133 Sum_probs=37.6
Q ss_pred CCceEEEEeCCCC--CCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHH
Q 010508 169 KASNLLFVDQPTG--TGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASR 241 (508)
Q Consensus 169 k~anvLyiDqPvG--tGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~ 241 (508)
+.|-|.|++.... ...+-.++ .--+..+.+|-+|+...=..+ =....+-+.|||||+.-+-.-++.
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~~-----~~A~~ga~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAASP-----GYARAGAPRLARFLDGLRATH--GPDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCccccccCc-----hHHHHHHHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHHHHHhhh
Confidence 6788888855444 22221111 112345667777777664444 113468999999998665444433
No 188
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=32.25 E-value=1e+02 Score=30.41 Aligned_cols=58 Identities=17% Similarity=0.340 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHHHh-CCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChh
Q 010508 200 VSNDLYDFLQAFFAE-HPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPA 269 (508)
Q Consensus 200 ~a~d~~~fL~~F~~~-~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 269 (508)
.++++..++++++.. +.+ ....+-|. |||---|.=+..+.+.. ++.|+.||.+.+++.
T Consensus 177 ~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 177 QAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP--------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC--------CCCEEEeehHhhCHH
Confidence 467889999999975 333 33344444 99999999888887642 589999999998754
No 189
>PRK01184 hypothetical protein; Provisional
Probab=31.18 E-value=35 Score=31.53 Aligned_cols=27 Identities=22% Similarity=0.203 Sum_probs=18.2
Q ss_pred EEEEECCCCCc--hhhhhhhhcCCCeEEe
Q 010508 129 VVIWLTGGPGC--SSELALFYENGPFHIA 155 (508)
Q Consensus 129 lvlWlnGGPGc--SS~~glf~E~GP~~i~ 155 (508)
.+|+|.|+||+ |....++.+.|=..++
T Consensus 2 ~~i~l~G~~GsGKsT~a~~~~~~g~~~i~ 30 (184)
T PRK01184 2 KIIGVVGMPGSGKGEFSKIAREMGIPVVV 30 (184)
T ss_pred cEEEEECCCCCCHHHHHHHHHHcCCcEEE
Confidence 58999999999 4444456666633333
No 190
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=30.71 E-value=80 Score=30.32 Aligned_cols=56 Identities=14% Similarity=0.271 Sum_probs=38.4
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccccccccccccCcceeeeeCCeeeeEEEEecCeEEEEEcCCCccCCccChHHHH
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAMEWSGQKDFGAAATVPFKVDGAETGQIKSHGPLTFLKVHDAGHMVPMDQPKASL 485 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~W~g~~~F~~a~~~pw~v~g~~aG~~k~~~~Ltf~~V~~AGHmvP~DqP~~a~ 485 (508)
-.+++|.+|+.|-++.+....+|.+.. .++.+++.+|.|+-...-....-
T Consensus 149 P~~~lvi~g~~Ddvv~l~~~l~~~~~~------------------------------~~~~i~i~~a~HFF~gKl~~l~~ 198 (210)
T COG2945 149 PSPGLVIQGDADDVVDLVAVLKWQESI------------------------------KITVITIPGADHFFHGKLIELRD 198 (210)
T ss_pred CCCceeEecChhhhhcHHHHHHhhcCC------------------------------CCceEEecCCCceecccHHHHHH
Confidence 478999999999666655555554432 46779999999998665555443
Q ss_pred HHHHHHH
Q 010508 486 QMLQSWM 492 (508)
Q Consensus 486 ~ml~~fl 492 (508)
.+.+|+
T Consensus 199 -~i~~~l 204 (210)
T COG2945 199 -TIADFL 204 (210)
T ss_pred -HHHHHh
Confidence 344454
No 191
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=29.99 E-value=58 Score=32.98 Aligned_cols=49 Identities=24% Similarity=0.616 Sum_probs=36.5
Q ss_pred CCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccc
Q 010508 167 WDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAG 232 (508)
Q Consensus 167 W~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG 232 (508)
.++.+-||-||-|+|+|.|- .|+++-+-|- |..||++.--.+|+ .|||+
T Consensus 67 f~enSkvI~VeGnI~sGK~k-------------lAKelAe~Lg--f~hfP~~~~d~iyv--dsyg~ 115 (393)
T KOG3877|consen 67 FHENSKVIVVEGNIGSGKTK-------------LAKELAEQLG--FVHFPEFRMDDIYV--DSYGN 115 (393)
T ss_pred hcccceEEEEeCCcccCchh-------------HHHHHHHHhC--Ccccccccccceee--cccCc
Confidence 45667899999999999763 3444444332 67899998888887 68987
No 192
>PRK14731 coaE dephospho-CoA kinase; Provisional
Probab=29.70 E-value=60 Score=31.00 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=25.8
Q ss_pred CCCEEEEECCCCCc--hhhhhhhhcCCCeEEeCC
Q 010508 126 SDPVVIWLTGGPGC--SSELALFYENGPFHIANN 157 (508)
Q Consensus 126 ~dPlvlWlnGGPGc--SS~~glf~E~GP~~i~~~ 157 (508)
..|++|=++||+|| |.+...|.+.|-..++.+
T Consensus 3 ~~~~~igitG~igsGKSt~~~~l~~~g~~v~d~D 36 (208)
T PRK14731 3 SLPFLVGVTGGIGSGKSTVCRFLAEMGCELFEAD 36 (208)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHCCCeEEecc
Confidence 35789999999999 778888888887766643
No 193
>PLN02561 triosephosphate isomerase
Probab=29.32 E-value=91 Score=31.09 Aligned_cols=58 Identities=17% Similarity=0.287 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHHHHh-CCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCCh
Q 010508 200 VSNDLYDFLQAFFAE-HPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDP 268 (508)
Q Consensus 200 ~a~d~~~fL~~F~~~-~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp 268 (508)
-++++.+++++++.+ +..-..+++-|. |||---|.-+..+... .++.|+.||.+-+|+
T Consensus 181 ~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 181 QAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ--------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC--------CCCCeEEEehHhhHH
Confidence 467888999998864 322223344444 9999999999888763 468999999999986
No 194
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=29.31 E-value=1.3e+02 Score=33.02 Aligned_cols=19 Identities=11% Similarity=0.191 Sum_probs=15.1
Q ss_pred CCCEEEEcccccccchHHH
Q 010508 220 KNDFYITGESYAGHYIPAF 238 (508)
Q Consensus 220 ~~~~yI~GESYgG~yvP~l 238 (508)
.+++-|+|||.||..|-.+
T Consensus 194 p~~vTl~G~saGa~~v~~l 212 (545)
T KOG1516|consen 194 PKNVTLFGHSAGAASVSLL 212 (545)
T ss_pred CCeEEEEeechhHHHHHHH
Confidence 3569999999999777543
No 195
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=29.24 E-value=49 Score=34.12 Aligned_cols=65 Identities=20% Similarity=0.305 Sum_probs=37.5
Q ss_pred CceEEEEeCCCCCC-cccc----------cCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHH
Q 010508 170 ASNLLFVDQPTGTG-FSYT----------SDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAF 238 (508)
Q Consensus 170 ~anvLyiDqPvGtG-fSy~----------~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~l 238 (508)
.--|+|-||-|||| |--. ....-.....++-....|.||...|+- ..++|++|-|=|...+-.+
T Consensus 65 ~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~yep-----GD~Iy~FGFSRGAf~aRVl 139 (423)
T COG3673 65 VTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYEP-----GDEIYAFGFSRGAFSARVL 139 (423)
T ss_pred ceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCC-----CCeEEEeeccchhHHHHHH
Confidence 45689999988887 2110 000011122334445677777765542 4579999999985444333
Q ss_pred H
Q 010508 239 A 239 (508)
Q Consensus 239 A 239 (508)
|
T Consensus 140 a 140 (423)
T COG3673 140 A 140 (423)
T ss_pred H
Confidence 3
No 196
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=29.18 E-value=79 Score=29.64 Aligned_cols=40 Identities=15% Similarity=0.435 Sum_probs=22.3
Q ss_pred eEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHh
Q 010508 172 NLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAE 214 (508)
Q Consensus 172 nvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~ 214 (508)
++++.|+|=++|..|... ...++....++..+++..++.+
T Consensus 2 dliitDPPY~~~~~~~~~---~~~~~~~~~~~y~~~~~~~~~~ 41 (231)
T PF01555_consen 2 DLIITDPPYNIGKDYNNY---FDYGDNKNHEEYLEWMEEWLKE 41 (231)
T ss_dssp EEEEE---TSSSCS--------CSCHCCHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcchh---hhccCCCCHHHHHHHHHHHHHH
Confidence 789999999999996221 1223334456677777777764
No 197
>PRK14565 triosephosphate isomerase; Provisional
Probab=28.25 E-value=98 Score=30.55 Aligned_cols=52 Identities=13% Similarity=0.222 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChhh
Q 010508 200 VSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAI 270 (508)
Q Consensus 200 ~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~ 270 (508)
.++++.++++++. ++.-|. |||.--|.-+..+.+. -++.|+.||.+.+++..
T Consensus 175 ~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~--------~~iDG~LvG~asl~~~~ 226 (237)
T PRK14565 175 AIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSI--------NQLSGVLVGSASLDVDS 226 (237)
T ss_pred HHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcC--------CCCCEEEEechhhcHHH
Confidence 4678888888762 223333 9999999999998763 35899999999998753
No 198
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.14 E-value=62 Score=37.25 Aligned_cols=95 Identities=21% Similarity=0.359 Sum_probs=52.5
Q ss_pred CCCEEEEECCCCCc-------hhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChh
Q 010508 126 SDPVVIWLTGGPGC-------SSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEE 198 (508)
Q Consensus 126 ~dPlvlWlnGGPGc-------SS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~ 198 (508)
+-==||++-|--|+ .|....-+.+||++=..+ ..|+++. +-.-+|= .=-||-= .-+...
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~---~d~~~~~----DFFaVDF--nEe~tAm-----~G~~l~ 153 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTED---RDNPFSF----DFFAVDF--NEEFTAM-----HGHILL 153 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhc---ccCcccc----ceEEEcc--cchhhhh-----ccHhHH
Confidence 44457889888887 445566778899973221 2344443 2222331 1111110 001223
Q ss_pred hhHHHHHHHH---HHHHHhCCCCC---CCCEEEEcccccccc
Q 010508 199 GVSNDLYDFL---QAFFAEHPQYA---KNDFYITGESYAGHY 234 (508)
Q Consensus 199 ~~a~d~~~fL---~~F~~~~Pe~~---~~~~yI~GESYgG~y 234 (508)
+.++.+.+++ ..-++.-+||+ ...+.|.||||||.-
T Consensus 154 dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiV 195 (973)
T KOG3724|consen 154 DQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIV 195 (973)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHH
Confidence 3455555555 44555556777 566999999999943
No 199
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=27.55 E-value=79 Score=33.69 Aligned_cols=47 Identities=21% Similarity=0.418 Sum_probs=38.4
Q ss_pred CChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHh
Q 010508 195 HDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHK 244 (508)
Q Consensus 195 ~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~ 244 (508)
.+.+++|+|+-+ |..|+.+ +++.+++.+.|-|+|.-..|..-.++..
T Consensus 303 rtPe~~a~Dl~r-~i~~y~~--~w~~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 303 RTPEQIAADLSR-LIRFYAR--RWGAKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred CCHHHHHHHHHH-HHHHHHH--hhCcceEEEEeecccchhhHHHHHhCCH
Confidence 367789999987 6667776 5888999999999999999987776643
No 200
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=24.82 E-value=1.5e+02 Score=29.41 Aligned_cols=59 Identities=19% Similarity=0.276 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHHHHh-CCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChhh
Q 010508 200 VSNDLYDFLQAFFAE-HPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAI 270 (508)
Q Consensus 200 ~a~d~~~fL~~F~~~-~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~ 270 (508)
.++++.+|+++++.+ +. -...++-|. |||---|.-+..+... -++.|+.||.+.+++..
T Consensus 181 ~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~--------~~vDG~LVG~Asl~~~~ 240 (250)
T PRK00042 181 QAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ--------PDIDGALVGGASLKAED 240 (250)
T ss_pred HHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEeeeeechHH
Confidence 467889999999874 32 122334444 9999999999888764 46899999999987653
No 201
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=24.60 E-value=65 Score=24.48 Aligned_cols=22 Identities=23% Similarity=0.610 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHHHHHhCCCCCC
Q 010508 199 GVSNDLYDFLQAFFAEHPQYAK 220 (508)
Q Consensus 199 ~~a~d~~~fL~~F~~~~Pe~~~ 220 (508)
++-+++++.|+.|++.||.+-.
T Consensus 5 eiPe~L~~~m~~fie~hP~WDQ 26 (57)
T PF10929_consen 5 EIPEDLHQAMKDFIETHPNWDQ 26 (57)
T ss_pred cccHHHHHHHHHHHHcCCCchH
Confidence 4668999999999999998864
No 202
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=24.16 E-value=36 Score=32.81 Aligned_cols=51 Identities=20% Similarity=0.146 Sum_probs=32.1
Q ss_pred HHHHHHh-CCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChh
Q 010508 208 LQAFFAE-HPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPA 269 (508)
Q Consensus 208 L~~F~~~-~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 269 (508)
|..|.++ ++-...+ ..|+|.|+||.-+-.++.+..+ -+.+++.-+|.+++.
T Consensus 102 l~p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd----------~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 102 LIPYIEANYRTDPDR-RAIAGHSMGGYGALYLALRHPD----------LFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHHHHSSEEECC-EEEEEETHHHHHHHHHHHHSTT----------TESEEEEESEESETT
T ss_pred chhHHHHhcccccce-eEEeccCCCcHHHHHHHHhCcc----------ccccccccCcccccc
Confidence 3444443 3333333 8999999999766666665433 367777766666654
No 203
>COG3150 Predicted esterase [General function prediction only]
Probab=24.04 E-value=1.1e+02 Score=28.65 Aligned_cols=62 Identities=18% Similarity=0.233 Sum_probs=42.3
Q ss_pred CCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChhhhh
Q 010508 193 IRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAIQY 272 (508)
Q Consensus 193 ~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~ 272 (508)
.+++..++++.+-..++ ++..+..-|+|-|-||.|..-|+.+. -|+.+ |-||-+-|....
T Consensus 38 l~h~p~~a~~ele~~i~-------~~~~~~p~ivGssLGGY~At~l~~~~------------Girav-~~NPav~P~e~l 97 (191)
T COG3150 38 LPHDPQQALKELEKAVQ-------ELGDESPLIVGSSLGGYYATWLGFLC------------GIRAV-VFNPAVRPYELL 97 (191)
T ss_pred CCCCHHHHHHHHHHHHH-------HcCCCCceEEeecchHHHHHHHHHHh------------CChhh-hcCCCcCchhhh
Confidence 45677777777776666 66777799999999997776666553 23433 457777776554
Q ss_pred hh
Q 010508 273 KE 274 (508)
Q Consensus 273 ~~ 274 (508)
..
T Consensus 98 ~g 99 (191)
T COG3150 98 TG 99 (191)
T ss_pred hh
Confidence 43
No 204
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=23.67 E-value=1e+02 Score=28.84 Aligned_cols=85 Identities=14% Similarity=0.187 Sum_probs=50.6
Q ss_pred ceEEEEeCCCCCCc-ccccCCCCCCCChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhccccc
Q 010508 171 SNLLFVDQPTGTGF-SYTSDKDDIRHDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEK 249 (508)
Q Consensus 171 anvLyiDqPvGtGf-Sy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~ 249 (508)
..+--|+-|+..+. +|. .+...-++++.+.++++..+-| +.++.|+|-|=|+..+-..... ....
T Consensus 40 ~~~~~V~YpA~~~~~~y~-------~S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~----~~l~ 105 (179)
T PF01083_consen 40 VAVQGVEYPASLGPNSYG-------DSVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSG----DGLP 105 (179)
T ss_dssp EEEEE--S---SCGGSCH-------HHHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHH----TTSS
T ss_pred eEEEecCCCCCCCccccc-------ccHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHh----ccCC
Confidence 34555778888877 443 2334556788888999888888 4589999999999666555444 1111
Q ss_pred ccceEeeeee-eccCCCCChh
Q 010508 250 QGIHINLKGF-AIGNGLTDPA 269 (508)
Q Consensus 250 ~~~~inLkGi-~IGNg~~dp~ 269 (508)
....-++.++ .+|||.-.+.
T Consensus 106 ~~~~~~I~avvlfGdP~~~~~ 126 (179)
T PF01083_consen 106 PDVADRIAAVVLFGDPRRGAG 126 (179)
T ss_dssp HHHHHHEEEEEEES-TTTBTT
T ss_pred hhhhhhEEEEEEecCCcccCC
Confidence 1122356664 6898887543
No 205
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=23.52 E-value=1.9e+02 Score=28.50 Aligned_cols=28 Identities=14% Similarity=0.134 Sum_probs=25.7
Q ss_pred CceEEEEeecCcccCchhhHHHHHhccc
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAME 433 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L~ 433 (508)
..+||+..|+.|-+||.....+|-+.++
T Consensus 164 k~Pilfl~ae~D~~~p~~~v~~~ee~lk 191 (242)
T KOG3043|consen 164 KAPILFLFAELDEDVPPKDVKAWEEKLK 191 (242)
T ss_pred CCCEEEEeecccccCCHHHHHHHHHHHh
Confidence 5899999999999999999999988875
No 206
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=23.51 E-value=55 Score=31.01 Aligned_cols=95 Identities=19% Similarity=0.249 Sum_probs=52.3
Q ss_pred CCCCEEEEECCCCCchhhh----hhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCC--cccccCCCCCC----
Q 010508 125 KSDPVVIWLTGGPGCSSEL----ALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTG--FSYTSDKDDIR---- 194 (508)
Q Consensus 125 ~~dPlvlWlnGGPGcSS~~----glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtG--fSy~~~~~~~~---- 194 (508)
...|.||.+++--|..... -.|-+.| | .++-.|.=-|.+ .+...+.....
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~G-y-------------------~v~~pD~f~~~~~~~~~~~~~~~~~~~~~ 71 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLAEEG-Y-------------------VVLAPDLFGGRGAPPSDPEEAFAAMRELF 71 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHHHTT---------------------EEEEE-CCCCTS--CCCHHCHHHHHHHCH
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHHhcC-C-------------------CEEecccccCCCCCccchhhHHHHHHHHH
Confidence 3689999999999886532 3445666 4 334444333333 11111000000
Q ss_pred -CChhhhHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHH
Q 010508 195 -HDEEGVSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFAS 240 (508)
Q Consensus 195 -~~~~~~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~ 240 (508)
...+.+.+++.. ..++++..|+-...++.++|.|+||.++-.+|.
T Consensus 72 ~~~~~~~~~~~~a-a~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~ 117 (218)
T PF01738_consen 72 APRPEQVAADLQA-AVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAA 117 (218)
T ss_dssp HHSHHHHHHHHHH-HHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHH-HHHHHHhccccCCCcEEEEEEecchHHhhhhhh
Confidence 012334455533 456778777777788999999999977665553
No 207
>PF06414 Zeta_toxin: Zeta toxin; InterPro: IPR010488 This entry represents a domain originally identified in bacterial zeta toxin proteins, where it comprises the whole protein []. It has subsequently been found in a number of other proteins, such as polynucleotide kinase and 2',3'-cyclic-nucleotide 3'-phosphodiesterase. It appears to function as a kinase domain [, ].; GO: 0005524 ATP binding, 0016301 kinase activity; PDB: 2P5T_H 1GVN_B 3Q8X_D.
Probab=23.50 E-value=70 Score=30.13 Aligned_cols=23 Identities=30% Similarity=0.561 Sum_probs=17.4
Q ss_pred CCCEEEEECCCCCc--hhhhhhhhc
Q 010508 126 SDPVVIWLTGGPGC--SSELALFYE 148 (508)
Q Consensus 126 ~dPlvlWlnGGPGc--SS~~glf~E 148 (508)
..|+++.+-|+||| |++...+.+
T Consensus 13 ~~P~~~i~aG~~GsGKSt~~~~~~~ 37 (199)
T PF06414_consen 13 EKPTLIIIAGQPGSGKSTLARQLLE 37 (199)
T ss_dssp SS-EEEEEES-TTSTTHHHHHHHHH
T ss_pred cCCEEEEEeCCCCCCHHHHHHHhhh
Confidence 89999999999999 777665554
No 208
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=22.86 E-value=50 Score=22.79 Aligned_cols=11 Identities=45% Similarity=1.135 Sum_probs=5.9
Q ss_pred CEEEEECCCCC
Q 010508 128 PVVIWLTGGPG 138 (508)
Q Consensus 128 PlvlWlnGGPG 138 (508)
-=.||++|-||
T Consensus 25 gRTiWFqGdPG 35 (39)
T PF09292_consen 25 GRTIWFQGDPG 35 (39)
T ss_dssp S-EEEESS---
T ss_pred CCEEEeeCCCC
Confidence 34799999987
No 209
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=22.82 E-value=2.7e+02 Score=29.62 Aligned_cols=116 Identities=21% Similarity=0.334 Sum_probs=65.3
Q ss_pred CCEEEEECCCCCchhhhhhhhcCCCeEEeCCCcccccCCCCCCCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHH
Q 010508 127 DPVVIWLTGGPGCSSELALFYENGPFHIANNLSLVWNDYGWDKASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYD 206 (508)
Q Consensus 127 dPlvlWlnGGPGcSS~~glf~E~GP~~i~~~~~l~~N~~sW~k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~ 206 (508)
.|| |-++|=||.=-. |+..=|..-+++..=..++ -.+.||-=--| |-|||-+.+..+ .+..++|.-+..
T Consensus 153 ~Pl-Ll~HGwPGsv~E---FykfIPlLT~p~~hg~~~d----~~FEVI~PSlP-GygwSd~~sk~G--Fn~~a~Arvmrk 221 (469)
T KOG2565|consen 153 KPL-LLLHGWPGSVRE---FYKFIPLLTDPKRHGNESD----YAFEVIAPSLP-GYGWSDAPSKTG--FNAAATARVMRK 221 (469)
T ss_pred cce-EEecCCCchHHH---HHhhhhhhcCccccCCccc----eeEEEeccCCC-CcccCcCCccCC--ccHHHHHHHHHH
Confidence 454 568999997332 3333344333321111122 23456655555 777777654443 344444443333
Q ss_pred HHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChhh
Q 010508 207 FLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAI 270 (508)
Q Consensus 207 fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~ 270 (508)
.+- ++.-++|||=|--||.....-+|+...+ |+.|+=+-+....|..
T Consensus 222 ----LMl---RLg~nkffiqGgDwGSiI~snlasLyPe----------nV~GlHlnm~~~~s~~ 268 (469)
T KOG2565|consen 222 ----LML---RLGYNKFFIQGGDWGSIIGSNLASLYPE----------NVLGLHLNMCFVNSPF 268 (469)
T ss_pred ----HHH---HhCcceeEeecCchHHHHHHHHHhhcch----------hhhHhhhcccccCCcH
Confidence 332 3556789999888998877777776644 5666666565555543
No 210
>PRK14734 coaE dephospho-CoA kinase; Provisional
Probab=22.66 E-value=90 Score=29.66 Aligned_cols=28 Identities=32% Similarity=0.408 Sum_probs=20.6
Q ss_pred EEEEECCCCCc--hhhhhhhhcCCCeEEeC
Q 010508 129 VVIWLTGGPGC--SSELALFYENGPFHIAN 156 (508)
Q Consensus 129 lvlWlnGGPGc--SS~~glf~E~GP~~i~~ 156 (508)
.+|.++||+|| |...-.|.+.|=..++.
T Consensus 2 ~~igitG~igsGKst~~~~l~~~g~~vid~ 31 (200)
T PRK14734 2 LRIGLTGGIGSGKSTVADLLSSEGFLIVDA 31 (200)
T ss_pred eEEEEECCCCCCHHHHHHHHHHCCCeEEeC
Confidence 47999999999 66677776666555554
No 211
>PRK11524 putative methyltransferase; Provisional
Probab=22.29 E-value=2.2e+02 Score=28.53 Aligned_cols=52 Identities=21% Similarity=0.402 Sum_probs=30.3
Q ss_pred CCceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHHHHHHHHHhC-CCCCC-CCEEEE
Q 010508 169 KASNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYDFLQAFFAEH-PQYAK-NDFYIT 226 (508)
Q Consensus 169 k~anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~~-Pe~~~-~~~yI~ 226 (508)
...++|+.|+|-++|..|....... + .++..++|..|+... .-++. -.+||.
T Consensus 26 ~siDlIitDPPY~~~~~~~~~~~~~--~----~~~~~~~l~~~l~~~~rvLK~~G~i~i~ 79 (284)
T PRK11524 26 ESVDLIFADPPYNIGKNFDGLIEAW--K----EDLFIDWLYEWIDECHRVLKKQGTMYIM 79 (284)
T ss_pred CcccEEEECCCcccccccccccccc--c----HHHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 3579999999999887765332111 1 234555667776642 22332 246665
No 212
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=22.03 E-value=47 Score=35.07 Aligned_cols=29 Identities=28% Similarity=0.246 Sum_probs=15.6
Q ss_pred CCCEEEEECCCCCc----hhhhhhhhcCCCeEE
Q 010508 126 SDPVVIWLTGGPGC----SSELALFYENGPFHI 154 (508)
Q Consensus 126 ~dPlvlWlnGGPGc----SS~~glf~E~GP~~i 154 (508)
+-||||+=+|--|+ |++.+-+--.|=..+
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~ 131 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVA 131 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEE
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEE
Confidence 57999999998777 555555555664443
No 213
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=21.94 E-value=91 Score=30.89 Aligned_cols=52 Identities=25% Similarity=0.230 Sum_probs=33.8
Q ss_pred HHHHHHHHh-CCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCCh
Q 010508 206 DFLQAFFAE-HPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDP 268 (508)
Q Consensus 206 ~fL~~F~~~-~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp 268 (508)
+.|..+.++ ++ ...++++|+|+|+||..+-.++.+-. -.+++++..+|..++
T Consensus 123 ~~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~p----------~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 123 QELPALVAAQFP-LDGERQGITGHSMGGHGALVIALKNP----------DRFKSVSAFAPIVAP 175 (275)
T ss_pred HHHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhCc----------ccceEEEEECCccCc
Confidence 334444444 32 44568999999999966666655422 136788888888765
No 214
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=21.76 E-value=75 Score=30.94 Aligned_cols=27 Identities=19% Similarity=0.252 Sum_probs=22.8
Q ss_pred CceEEEEeecCcccCchhhHHHHHhcc
Q 010508 406 GIRVLIYAGEYDLICNWLGNSKWVHAM 432 (508)
Q Consensus 406 girVLIY~Gd~D~i~n~~G~~~wi~~L 432 (508)
+++++|++|+.|..|+....++.++++
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHH
Confidence 578999999999999998887777653
No 215
>PRK00081 coaE dephospho-CoA kinase; Reviewed
Probab=21.76 E-value=95 Score=29.22 Aligned_cols=29 Identities=41% Similarity=0.466 Sum_probs=22.2
Q ss_pred CEEEEECCCCCc--hhhhhhhhcCCCeEEeC
Q 010508 128 PVVIWLTGGPGC--SSELALFYENGPFHIAN 156 (508)
Q Consensus 128 PlvlWlnGGPGc--SS~~glf~E~GP~~i~~ 156 (508)
+.+|-++||+|| |.....|.+.|-..++.
T Consensus 2 ~~~i~ltG~~gsGKst~~~~l~~~g~~~i~~ 32 (194)
T PRK00081 2 MLIIGLTGGIGSGKSTVANLFAELGAPVIDA 32 (194)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHcCCEEEEe
Confidence 467899999988 77888888877555553
No 216
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.73 E-value=1.5e+02 Score=31.21 Aligned_cols=49 Identities=8% Similarity=0.116 Sum_probs=29.9
Q ss_pred CCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCChhh
Q 010508 220 KNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDPAI 270 (508)
Q Consensus 220 ~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~ 270 (508)
-.++||.+||+|.-.+-..-..+.-++. ......++=+++-.|-+|-+.
T Consensus 190 ~~~I~ilAHSMGtwl~~e~LrQLai~~~--~~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 190 VKRIYLLAHSMGTWLLMEALRQLAIRAD--RPLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred CceEEEEEecchHHHHHHHHHHHhccCC--cchhhhhhheEeeCCCCChhh
Confidence 4579999999998444444444433321 114456777777777666544
No 217
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=21.45 E-value=1.3e+02 Score=28.73 Aligned_cols=63 Identities=16% Similarity=0.257 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCCh
Q 010508 200 VSNDLYDFLQAFFAEHPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDP 268 (508)
Q Consensus 200 ~a~d~~~fL~~F~~~~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp 268 (508)
..++.++.|.+++++..-|- =|.|.|=|+..+..++.......... ....+|-+++-+|+.-+
T Consensus 85 ~~~~sl~~l~~~i~~~GPfd----GvlGFSQGA~lAa~ll~~~~~~~~~~--~~~~~kf~V~~sg~~p~ 147 (212)
T PF03959_consen 85 GLDESLDYLRDYIEENGPFD----GVLGFSQGAALAALLLALQQRGRPDG--AHPPFKFAVFISGFPPP 147 (212)
T ss_dssp --HHHHHHHHHHHHHH---S----EEEEETHHHHHHHHHHHHHHHHST----T----SEEEEES----E
T ss_pred CHHHHHHHHHHHHHhcCCeE----EEEeecHHHHHHHHHHHHHHhhcccc--cCCCceEEEEEcccCCC
Confidence 34566677788877643333 39999999977777776655432211 24566776666666544
No 218
>PTZ00333 triosephosphate isomerase; Provisional
Probab=20.91 E-value=1.6e+02 Score=29.40 Aligned_cols=59 Identities=19% Similarity=0.325 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHHHHHh-CCCCCCCCEEEEcccccccchHHHHHHHHhcccccccceEeeeeeeccCCCCCh
Q 010508 199 GVSNDLYDFLQAFFAE-HPQYAKNDFYITGESYAGHYIPAFASRVHKGNKEKQGIHINLKGFAIGNGLTDP 268 (508)
Q Consensus 199 ~~a~d~~~fL~~F~~~-~Pe~~~~~~yI~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~~dp 268 (508)
+.++++++++++++.. +-.-.....-|. |||---|.-+..+... -++.|+.||.+.+++
T Consensus 183 e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 183 EQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ--------PDIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEehHhhhh
Confidence 3577899999998864 322222334444 9999999999888764 368999999998874
No 219
>PRK14733 coaE dephospho-CoA kinase; Provisional
Probab=20.91 E-value=96 Score=29.79 Aligned_cols=30 Identities=20% Similarity=0.177 Sum_probs=22.2
Q ss_pred CCCEEEEECCCCCc--hhhhhhhhc-CCCeEEe
Q 010508 126 SDPVVIWLTGGPGC--SSELALFYE-NGPFHIA 155 (508)
Q Consensus 126 ~dPlvlWlnGGPGc--SS~~glf~E-~GP~~i~ 155 (508)
-.|.+|=|+||+|| |.....|.| .|--.++
T Consensus 4 ~~~~~IglTG~iGsGKStv~~~l~~~lg~~vid 36 (204)
T PRK14733 4 INTYPIGITGGIASGKSTATRILKEKLNLNVVC 36 (204)
T ss_pred CceEEEEEECCCCCCHHHHHHHHHHHcCCeEEe
Confidence 46899999999999 777777775 4643333
No 220
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=20.67 E-value=57 Score=30.03 Aligned_cols=13 Identities=54% Similarity=0.933 Sum_probs=11.1
Q ss_pred CCEEEEECCCCCc
Q 010508 127 DPVVIWLTGGPGC 139 (508)
Q Consensus 127 dPlvlWlnGGPGc 139 (508)
+|.||||+|=||+
T Consensus 1 ~g~vIwltGlsGs 13 (156)
T PF01583_consen 1 KGFVIWLTGLSGS 13 (156)
T ss_dssp S-EEEEEESSTTS
T ss_pred CCEEEEEECCCCC
Confidence 4899999999998
No 221
>KOG2682 consensus NAD-dependent histone deacetylases and class I sirtuins (SIR2 family) [Chromatin structure and dynamics; Transcription]
Probab=20.17 E-value=49 Score=32.56 Aligned_cols=67 Identities=22% Similarity=0.562 Sum_probs=42.4
Q ss_pred ceEEEEeCCCCCCcccccCCCCCCCChhhhHHHHHH---------HHHHHHHhCCCCCCCCEE-EEcccccccchHHHHH
Q 010508 171 SNLLFVDQPTGTGFSYTSDKDDIRHDEEGVSNDLYD---------FLQAFFAEHPQYAKNDFY-ITGESYAGHYIPAFAS 240 (508)
Q Consensus 171 anvLyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~---------fL~~F~~~~Pe~~~~~~y-I~GESYgG~yvP~lA~ 240 (508)
.-|++. ||.|-|.+..-.|.+.-..+.-+.+-+ |=..||+++|+ ||| ++-|=|-|.|=|.+.+
T Consensus 37 ~rVi~m---VGAGISTsaGIPDFRSP~tGlY~NLqr~~LPYpEAiFel~yF~~nP~----PF~tLAkELyPgnfkPt~~H 109 (314)
T KOG2682|consen 37 RRVIVM---VGAGISTSAGIPDFRSPGTGLYDNLQRYHLPYPEAIFELSYFKKNPE----PFFTLAKELYPGNFKPTITH 109 (314)
T ss_pred ceEEEE---ecCccccccCCCCCCCCCchhhhhHHHhcCCChhhhhccHHhhcCCc----hHHHHHHHhCCCCcCchhHH
Confidence 345554 699999987766666444333222211 22345666653 555 6778899999999888
Q ss_pred HHHh
Q 010508 241 RVHK 244 (508)
Q Consensus 241 ~i~~ 244 (508)
..++
T Consensus 110 Yflr 113 (314)
T KOG2682|consen 110 YFLR 113 (314)
T ss_pred HHHH
Confidence 7765
No 222
>cd02022 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis.
Probab=20.17 E-value=82 Score=29.13 Aligned_cols=21 Identities=48% Similarity=0.607 Sum_probs=16.6
Q ss_pred EEEECCCCCc--hhhhhhhhcCC
Q 010508 130 VIWLTGGPGC--SSELALFYENG 150 (508)
Q Consensus 130 vlWlnGGPGc--SS~~glf~E~G 150 (508)
+|-++||||| |.....|.+.|
T Consensus 1 ii~itG~~gsGKst~~~~l~~~g 23 (179)
T cd02022 1 IIGLTGGIGSGKSTVAKLLKELG 23 (179)
T ss_pred CEEEECCCCCCHHHHHHHHHHCC
Confidence 4789999999 77777777755
No 223
>PRK14738 gmk guanylate kinase; Provisional
Probab=20.06 E-value=99 Score=29.40 Aligned_cols=28 Identities=21% Similarity=0.406 Sum_probs=22.6
Q ss_pred CCCCCEEEEECCCCCc--hhhhhhhhcCCC
Q 010508 124 NKSDPVVIWLTGGPGC--SSELALFYENGP 151 (508)
Q Consensus 124 ~~~dPlvlWlnGGPGc--SS~~glf~E~GP 151 (508)
+|..|.+|-+.|++|| |++...+.+.||
T Consensus 9 ~~~~~~~ivi~GpsG~GK~tl~~~L~~~~~ 38 (206)
T PRK14738 9 KPAKPLLVVISGPSGVGKDAVLARMRERKL 38 (206)
T ss_pred CCCCCeEEEEECcCCCCHHHHHHHHHhcCC
Confidence 4578899999999999 777777777664
Done!