Query 010517
Match_columns 508
No_of_seqs 394 out of 4381
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 01:27:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010517.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010517hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 100.0 5.8E-36 1.2E-40 254.2 10.6 170 13-188 34-205 (226)
2 KOG4412 26S proteasome regulat 100.0 5.1E-34 1.1E-38 242.3 13.1 206 17-239 3-212 (226)
3 PHA02791 ankyrin-like protein; 100.0 1.4E-32 3E-37 265.2 18.8 206 10-236 23-231 (284)
4 PHA02874 ankyrin repeat protei 100.0 3.6E-31 7.9E-36 274.7 22.0 225 10-252 28-275 (434)
5 PHA02878 ankyrin repeat protei 100.0 8.3E-31 1.8E-35 275.2 23.5 211 13-241 33-310 (477)
6 PHA02874 ankyrin repeat protei 100.0 6.3E-30 1.4E-34 265.4 24.2 230 7-253 58-310 (434)
7 PHA02946 ankyin-like protein; 100.0 3.4E-30 7.3E-35 266.1 21.9 240 6-253 61-318 (446)
8 PHA02716 CPXV016; CPX019; EVM0 100.0 2.1E-30 4.6E-35 275.9 19.0 180 8-193 167-404 (764)
9 PHA02791 ankyrin-like protein; 100.0 1.1E-29 2.4E-34 245.0 22.1 163 16-186 60-225 (284)
10 PHA03100 ankyrin repeat protei 100.0 1.2E-29 2.7E-34 267.1 22.4 213 11-239 62-291 (480)
11 PHA02875 ankyrin repeat protei 100.0 1.4E-29 3.1E-34 261.4 22.3 220 7-239 25-246 (413)
12 PHA02716 CPXV016; CPX019; EVM0 100.0 1.1E-29 2.4E-34 270.4 21.3 171 6-181 201-429 (764)
13 KOG0509 Ankyrin repeat and DHH 100.0 2.8E-30 6.1E-35 259.4 15.7 210 17-241 44-255 (600)
14 PHA03095 ankyrin-like protein; 100.0 3.2E-29 7E-34 263.3 23.9 231 7-253 37-278 (471)
15 KOG0509 Ankyrin repeat and DHH 100.0 2E-30 4.3E-35 260.5 13.2 186 7-198 68-255 (600)
16 PHA03100 ankyrin repeat protei 100.0 2.4E-29 5.1E-34 265.0 21.7 227 10-253 28-271 (480)
17 PHA03095 ankyrin-like protein; 100.0 4.4E-29 9.5E-34 262.3 22.2 230 7-252 73-310 (471)
18 PHA02946 ankyin-like protein; 100.0 6.4E-29 1.4E-33 256.6 22.6 220 17-253 37-264 (446)
19 PHA02876 ankyrin repeat protei 100.0 6.3E-29 1.4E-33 272.1 23.8 233 7-252 168-463 (682)
20 PHA02875 ankyrin repeat protei 100.0 1.5E-28 3.2E-33 253.8 23.8 220 17-253 2-223 (413)
21 PHA02859 ankyrin repeat protei 100.0 2.4E-28 5.1E-33 227.3 18.5 177 14-196 18-200 (209)
22 PHA02876 ankyrin repeat protei 100.0 3.6E-28 7.7E-33 266.1 22.7 220 8-242 264-487 (682)
23 PHA02878 ankyrin repeat protei 100.0 3.2E-28 7E-33 255.6 20.4 160 32-199 149-311 (477)
24 PHA02989 ankyrin repeat protei 100.0 1.8E-27 4E-32 250.7 22.7 228 7-252 26-309 (494)
25 PHA02798 ankyrin-like protein; 100.0 4.2E-27 9.1E-32 247.7 20.7 220 17-252 36-311 (489)
26 KOG0510 Ankyrin repeat protein 99.9 9.4E-27 2E-31 238.2 19.2 230 8-252 145-397 (929)
27 KOG0510 Ankyrin repeat protein 99.9 1.1E-26 2.4E-31 237.7 17.3 231 9-252 113-361 (929)
28 PHA02859 ankyrin repeat protei 99.9 2.1E-26 4.5E-31 214.3 17.7 152 10-166 44-203 (209)
29 KOG0514 Ankyrin repeat protein 99.9 3.7E-27 8E-32 220.9 9.6 169 4-177 255-429 (452)
30 KOG0508 Ankyrin repeat protein 99.9 9.1E-27 2E-31 224.8 12.5 160 12-178 79-238 (615)
31 PHA02795 ankyrin-like protein; 99.9 5.7E-26 1.2E-30 227.4 18.3 168 12-185 111-292 (437)
32 KOG0508 Ankyrin repeat protein 99.9 6.7E-27 1.5E-31 225.7 11.1 188 14-208 39-235 (615)
33 PHA02989 ankyrin repeat protei 99.9 8E-26 1.7E-30 238.3 19.7 199 7-209 60-310 (494)
34 PHA02917 ankyrin-like protein; 99.9 3.1E-25 6.6E-30 237.9 21.6 234 7-256 22-300 (661)
35 PHA02798 ankyrin-like protein; 99.9 1.5E-25 3.2E-30 236.0 18.8 200 6-208 60-311 (489)
36 PLN03192 Voltage-dependent pot 99.9 2.2E-24 4.8E-29 239.6 20.1 167 14-188 522-688 (823)
37 PHA02795 ankyrin-like protein; 99.9 2.5E-24 5.5E-29 215.5 17.0 179 9-200 74-266 (437)
38 KOG0502 Integral membrane anky 99.9 5.9E-25 1.3E-29 192.7 9.0 150 11-168 123-272 (296)
39 PHA02730 ankyrin-like protein; 99.9 1.2E-23 2.5E-28 220.4 18.5 197 9-208 32-257 (672)
40 PHA02743 Viral ankyrin protein 99.9 8.7E-24 1.9E-28 189.4 14.5 145 6-155 9-162 (166)
41 KOG4177 Ankyrin [Cell wall/mem 99.9 3.2E-24 6.9E-29 232.8 13.8 228 8-246 431-659 (1143)
42 PHA02917 ankyrin-like protein; 99.9 3.6E-23 7.7E-28 222.0 18.1 208 30-253 12-252 (661)
43 PHA02730 ankyrin-like protein; 99.9 5.1E-23 1.1E-27 215.7 18.5 221 16-252 195-518 (672)
44 KOG0507 CASK-interacting adapt 99.9 1.3E-23 2.8E-28 213.7 12.2 221 5-240 37-263 (854)
45 KOG4177 Ankyrin [Cell wall/mem 99.9 4E-24 8.6E-29 232.1 8.9 219 7-241 397-616 (1143)
46 KOG0502 Integral membrane anky 99.9 1E-24 2.2E-29 191.2 3.1 183 11-201 90-272 (296)
47 PHA02741 hypothetical protein; 99.9 6.6E-23 1.4E-27 184.5 14.1 131 11-144 15-157 (169)
48 PHA02792 ankyrin-like protein; 99.9 6.3E-23 1.4E-27 212.7 15.3 217 6-240 94-452 (631)
49 PHA02743 Viral ankyrin protein 99.9 1.1E-22 2.4E-27 182.2 13.8 143 39-187 9-160 (166)
50 PHA02884 ankyrin repeat protei 99.9 3E-22 6.4E-27 193.3 17.0 156 11-179 26-186 (300)
51 PLN03192 Voltage-dependent pot 99.9 2.1E-22 4.5E-27 223.9 17.5 150 7-164 548-698 (823)
52 PHA02792 ankyrin-like protein; 99.9 4.5E-22 9.8E-27 206.4 18.5 205 9-221 167-478 (631)
53 PHA02741 hypothetical protein; 99.9 7.5E-22 1.6E-26 177.6 14.5 139 30-180 7-157 (169)
54 PHA02736 Viral ankyrin protein 99.9 3.3E-22 7.2E-27 177.3 10.6 133 9-146 9-153 (154)
55 KOG0505 Myosin phosphatase, re 99.9 4.9E-22 1.1E-26 196.1 12.5 172 21-198 44-274 (527)
56 TIGR00870 trp transient-recept 99.9 1.1E-21 2.3E-26 216.9 15.3 227 15-252 15-277 (743)
57 KOG0512 Fetal globin-inducing 99.9 3.7E-21 7.9E-26 162.9 12.8 144 17-166 63-209 (228)
58 KOG0514 Ankyrin repeat protein 99.8 2.4E-21 5.2E-26 182.0 9.4 158 43-207 261-426 (452)
59 PHA02736 Viral ankyrin protein 99.8 4.2E-21 9.2E-26 170.2 10.6 132 43-182 10-153 (154)
60 TIGR00870 trp transient-recept 99.8 1.6E-20 3.5E-25 207.5 15.9 197 7-210 42-279 (743)
61 PHA02884 ankyrin repeat protei 99.8 8.8E-20 1.9E-24 176.2 16.1 131 43-176 25-158 (300)
62 KOG0505 Myosin phosphatase, re 99.8 2.2E-20 4.8E-25 184.5 9.9 153 8-164 64-273 (527)
63 KOG0195 Integrin-linked kinase 99.8 2E-20 4.2E-25 170.6 6.9 155 25-185 8-163 (448)
64 KOG0195 Integrin-linked kinase 99.8 7.8E-20 1.7E-24 166.7 9.6 135 9-146 26-160 (448)
65 KOG0507 CASK-interacting adapt 99.8 3.6E-19 7.8E-24 181.7 14.1 207 18-241 4-231 (854)
66 PF12796 Ank_2: Ankyrin repeat 99.8 2.4E-18 5.1E-23 137.5 11.2 89 21-116 1-89 (89)
67 cd00204 ANK ankyrin repeats; 99.8 1.4E-17 3.1E-22 141.0 14.9 124 13-139 3-126 (126)
68 KOG4369 RTK signaling protein 99.8 8.8E-19 1.9E-23 183.6 8.1 212 15-239 755-967 (2131)
69 KOG0512 Fetal globin-inducing 99.8 8.1E-18 1.7E-22 142.7 11.8 147 53-205 66-215 (228)
70 cd00204 ANK ankyrin repeats; 99.7 8.2E-17 1.8E-21 136.3 15.3 125 45-175 2-126 (126)
71 KOG3676 Ca2+-permeable cation 99.7 1.8E-17 3.8E-22 171.7 13.0 166 9-178 135-331 (782)
72 PF12796 Ank_2: Ankyrin repeat 99.7 2.6E-17 5.6E-22 131.4 11.1 86 54-146 1-86 (89)
73 KOG4369 RTK signaling protein 99.7 5.3E-18 1.1E-22 177.9 7.5 219 7-239 780-1035(2131)
74 COG0666 Arp FOG: Ankyrin repea 99.6 1.8E-15 4E-20 142.0 13.7 129 44-178 67-203 (235)
75 KOG4214 Myotrophin and similar 99.6 1.5E-15 3.3E-20 115.4 9.6 99 20-122 5-103 (117)
76 KOG4214 Myotrophin and similar 99.6 2.3E-15 5E-20 114.4 9.5 102 52-159 4-105 (117)
77 KOG3676 Ca2+-permeable cation 99.6 2E-15 4.2E-20 156.7 11.8 125 14-141 181-330 (782)
78 COG0666 Arp FOG: Ankyrin repea 99.6 2.7E-14 5.8E-19 134.1 15.3 130 10-142 66-203 (235)
79 KOG1710 MYND Zn-finger and ank 99.6 1.2E-14 2.6E-19 133.0 11.5 123 16-140 11-133 (396)
80 PTZ00322 6-phosphofructo-2-kin 99.5 4.5E-14 9.7E-19 153.0 12.4 106 19-127 84-196 (664)
81 PTZ00322 6-phosphofructo-2-kin 99.5 7.5E-14 1.6E-18 151.3 12.3 102 53-159 85-193 (664)
82 KOG4172 Predicted E3 ubiquitin 99.5 1.1E-15 2.5E-20 102.2 -1.4 54 455-508 8-62 (62)
83 KOG0515 p53-interacting protei 99.5 8E-14 1.7E-18 137.1 10.0 121 16-139 549-672 (752)
84 PF13857 Ank_5: Ankyrin repeat 99.5 5.8E-14 1.3E-18 101.1 4.9 55 36-93 1-56 (56)
85 PF13857 Ank_5: Ankyrin repeat 99.4 1E-13 2.2E-18 99.8 4.7 55 70-126 1-56 (56)
86 PF13637 Ank_4: Ankyrin repeat 99.4 2.9E-13 6.2E-18 96.9 6.2 54 17-71 1-54 (54)
87 PF13637 Ank_4: Ankyrin repeat 99.4 4.8E-13 1E-17 95.7 6.7 53 86-138 1-53 (54)
88 KOG1710 MYND Zn-finger and ank 99.4 1.7E-12 3.7E-17 119.0 10.7 120 50-175 12-132 (396)
89 KOG0515 p53-interacting protei 99.4 2.1E-12 4.5E-17 127.2 9.8 121 54-179 554-676 (752)
90 PF13920 zf-C3HC4_3: Zinc fing 99.3 1.7E-12 3.7E-17 90.9 3.2 49 454-502 2-50 (50)
91 KOG4275 Predicted E3 ubiquitin 99.1 4.8E-12 1E-16 115.9 -1.7 51 454-508 300-350 (350)
92 KOG4265 Predicted E3 ubiquitin 99.1 2.9E-11 6.2E-16 115.3 2.9 56 452-507 288-343 (349)
93 KOG0506 Glutaminase (contains 99.0 6E-10 1.3E-14 108.9 5.6 89 16-107 505-594 (622)
94 KOG0320 Predicted E3 ubiquitin 98.9 1.3E-09 2.8E-14 93.5 6.0 51 455-506 132-186 (187)
95 KOG0823 Predicted E3 ubiquitin 98.9 7.7E-10 1.7E-14 99.4 4.3 56 450-506 43-103 (230)
96 PLN03208 E3 ubiquitin-protein 98.9 1.2E-09 2.7E-14 96.5 5.3 54 452-506 16-87 (193)
97 KOG0818 GTPase-activating prot 98.9 4.9E-09 1.1E-13 103.1 9.7 100 43-144 120-225 (669)
98 KOG0783 Uncharacterized conser 98.9 7E-10 1.5E-14 115.0 3.9 94 33-128 33-128 (1267)
99 KOG0317 Predicted E3 ubiquitin 98.9 1.6E-09 3.4E-14 100.3 3.9 47 453-500 238-284 (293)
100 KOG0782 Predicted diacylglycer 98.8 1.2E-08 2.7E-13 101.6 9.6 119 21-142 870-990 (1004)
101 KOG0818 GTPase-activating prot 98.8 1.5E-08 3.3E-13 99.7 9.3 93 13-108 123-222 (669)
102 KOG0783 Uncharacterized conser 98.8 2.7E-09 5.8E-14 110.8 3.8 83 10-95 45-128 (1267)
103 KOG0705 GTPase-activating prot 98.8 1.9E-08 4E-13 100.9 8.3 89 20-111 627-719 (749)
104 PF13923 zf-C3HC4_2: Zinc fing 98.8 4.3E-09 9.4E-14 69.3 2.5 38 457-495 1-39 (39)
105 KOG0506 Glutaminase (contains 98.8 8.2E-09 1.8E-13 101.1 5.4 93 48-143 504-597 (622)
106 KOG1571 Predicted E3 ubiquitin 98.7 2.3E-09 5E-14 102.5 0.8 53 452-508 303-355 (355)
107 PF13639 zf-RING_2: Ring finge 98.7 4.6E-09 1E-13 71.3 2.1 40 456-496 2-44 (44)
108 PHA02929 N1R/p28-like protein; 98.7 9.2E-09 2E-13 95.3 4.3 51 454-505 174-232 (238)
109 PF15227 zf-C3HC4_4: zinc fing 98.7 1.4E-08 3.1E-13 67.6 2.7 38 457-495 1-42 (42)
110 PF13606 Ank_3: Ankyrin repeat 98.7 3.4E-08 7.4E-13 60.7 3.9 27 50-77 2-28 (30)
111 PF00023 Ank: Ankyrin repeat H 98.6 4.5E-08 9.8E-13 61.9 4.3 30 50-80 2-31 (33)
112 PF13606 Ank_3: Ankyrin repeat 98.6 3.7E-08 8.1E-13 60.5 3.6 30 16-45 1-30 (30)
113 PF00023 Ank: Ankyrin repeat H 98.6 4.7E-08 1E-12 61.8 4.0 33 16-48 1-33 (33)
114 KOG0782 Predicted diacylglycer 98.6 1.7E-07 3.7E-12 93.7 9.1 118 54-177 870-989 (1004)
115 KOG3609 Receptor-activated Ca2 98.6 2E-07 4.3E-12 98.4 9.9 123 14-146 22-158 (822)
116 KOG0522 Ankyrin repeat protein 98.6 1.4E-07 3E-12 94.3 7.6 127 20-159 23-151 (560)
117 KOG0522 Ankyrin repeat protein 98.5 1.8E-07 3.8E-12 93.6 7.9 89 52-142 22-111 (560)
118 KOG0705 GTPase-activating prot 98.5 2.6E-07 5.6E-12 92.8 8.3 89 90-181 628-720 (749)
119 PHA02926 zinc finger-like prot 98.5 7.3E-08 1.6E-12 86.0 3.0 51 453-504 169-234 (242)
120 PF14634 zf-RING_5: zinc-RING 98.4 2.4E-07 5.3E-12 62.6 3.1 41 456-497 1-44 (44)
121 PF00097 zf-C3HC4: Zinc finger 98.4 2.1E-07 4.5E-12 62.1 2.4 38 457-495 1-41 (41)
122 cd00162 RING RING-finger (Real 98.4 2.6E-07 5.7E-12 62.8 3.0 43 456-499 1-45 (45)
123 smart00504 Ubox Modified RING 98.3 5E-07 1.1E-11 66.6 3.2 45 455-500 2-46 (63)
124 KOG0521 Putative GTPase activa 98.3 8.1E-07 1.8E-11 96.5 5.8 100 72-174 642-741 (785)
125 COG5574 PEX10 RING-finger-cont 98.3 3.5E-07 7.6E-12 83.8 2.5 45 455-500 216-262 (271)
126 TIGR00599 rad18 DNA repair pro 98.3 5.3E-07 1.1E-11 89.9 3.4 49 452-501 24-72 (397)
127 smart00184 RING Ring finger. E 98.3 9.1E-07 2E-11 57.9 3.3 38 457-495 1-39 (39)
128 KOG2384 Major histocompatibili 98.2 4.3E-06 9.3E-11 73.0 8.2 70 74-145 2-72 (223)
129 KOG0520 Uncharacterized conser 98.2 1.1E-06 2.3E-11 95.0 5.4 126 12-141 569-702 (975)
130 PF13445 zf-RING_UBOX: RING-ty 98.2 7.5E-07 1.6E-11 59.3 2.1 30 457-488 1-34 (43)
131 KOG0521 Putative GTPase activa 98.2 1.5E-06 3.3E-11 94.4 5.6 97 39-138 643-741 (785)
132 KOG2164 Predicted E3 ubiquitin 98.2 9E-07 1.9E-11 88.6 2.9 52 454-506 186-244 (513)
133 KOG3609 Receptor-activated Ca2 98.1 8.9E-06 1.9E-10 86.2 9.3 126 48-184 23-160 (822)
134 PF12678 zf-rbx1: RING-H2 zinc 98.1 3E-06 6.5E-11 64.1 3.4 41 455-496 20-73 (73)
135 KOG2384 Major histocompatibili 98.1 9E-06 1.9E-10 71.1 6.5 65 9-74 4-69 (223)
136 KOG0287 Postreplication repair 98.0 2E-06 4.3E-11 81.1 1.8 46 455-501 24-69 (442)
137 KOG0978 E3 ubiquitin ligase in 98.0 1.2E-06 2.6E-11 92.1 -0.0 51 455-506 644-697 (698)
138 COG5432 RAD18 RING-finger-cont 98.0 2.8E-06 6.1E-11 78.3 2.2 46 455-501 26-71 (391)
139 KOG0511 Ankyrin repeat protein 98.0 1.9E-05 4.1E-10 76.0 7.3 76 18-97 37-112 (516)
140 KOG0520 Uncharacterized conser 98.0 8.8E-06 1.9E-10 88.1 5.5 130 44-177 568-702 (975)
141 KOG0511 Ankyrin repeat protein 97.9 2.2E-05 4.8E-10 75.5 7.3 85 51-141 37-121 (516)
142 KOG1100 Predicted E3 ubiquitin 97.9 3.8E-06 8.2E-11 76.9 0.6 48 456-507 160-207 (207)
143 KOG0824 Predicted E3 ubiquitin 97.8 7.1E-06 1.5E-10 76.6 1.5 48 455-503 8-56 (324)
144 COG5243 HRD1 HRD ubiquitin lig 97.8 9.4E-06 2E-10 77.6 2.1 46 453-499 286-344 (491)
145 COG5540 RING-finger-containing 97.8 1.3E-05 2.8E-10 74.6 2.5 45 455-500 324-372 (374)
146 PF04564 U-box: U-box domain; 97.7 2.7E-05 5.8E-10 59.0 3.5 48 453-501 3-51 (73)
147 KOG4628 Predicted E3 ubiquitin 97.6 3.1E-05 6.8E-10 75.3 3.2 46 455-501 230-279 (348)
148 COG5236 Uncharacterized conser 97.5 7.6E-05 1.7E-09 70.7 4.1 58 444-502 51-110 (493)
149 KOG4692 Predicted E3 ubiquitin 97.5 5.5E-05 1.2E-09 71.9 2.5 51 452-503 420-470 (489)
150 KOG1785 Tyrosine kinase negati 97.4 6E-05 1.3E-09 72.8 2.0 47 455-502 370-418 (563)
151 KOG2177 Predicted E3 ubiquitin 97.4 5E-05 1.1E-09 75.7 1.5 45 452-497 11-55 (386)
152 PF14835 zf-RING_6: zf-RING of 97.4 4.2E-05 9.2E-10 54.6 -0.1 43 455-500 8-51 (65)
153 PF12861 zf-Apc11: Anaphase-pr 97.3 0.00024 5.2E-09 54.2 3.4 34 466-500 46-82 (85)
154 KOG4159 Predicted E3 ubiquitin 97.2 0.00016 3.4E-09 72.4 2.2 49 452-501 82-130 (398)
155 PF14447 Prok-RING_4: Prokaryo 97.2 0.00012 2.5E-09 50.6 0.5 45 454-501 7-51 (55)
156 KOG0311 Predicted E3 ubiquitin 97.1 7.4E-05 1.6E-09 71.5 -1.4 50 453-503 42-93 (381)
157 KOG0802 E3 ubiquitin ligase [P 97.1 0.00022 4.7E-09 76.0 1.9 47 453-500 290-341 (543)
158 KOG1039 Predicted E3 ubiquitin 97.0 0.00034 7.4E-09 68.6 1.9 51 453-504 160-225 (344)
159 PF14570 zf-RING_4: RING/Ubox 96.8 0.00063 1.4E-08 46.0 1.5 42 457-499 1-47 (48)
160 COG5175 MOT2 Transcriptional r 96.7 0.0011 2.4E-08 62.9 3.1 49 452-501 12-65 (480)
161 smart00248 ANK ankyrin repeats 96.6 0.0029 6.3E-08 37.1 3.7 27 50-77 2-28 (30)
162 KOG2505 Ankyrin repeat protein 96.6 0.0035 7.6E-08 62.9 6.0 64 64-127 404-471 (591)
163 smart00248 ANK ankyrin repeats 96.6 0.0035 7.6E-08 36.8 3.9 26 86-111 2-27 (30)
164 KOG2505 Ankyrin repeat protein 96.6 0.0033 7.2E-08 63.1 5.6 64 30-96 404-473 (591)
165 TIGR00570 cdk7 CDK-activating 96.5 0.0022 4.7E-08 61.7 3.4 30 471-501 25-55 (309)
166 KOG2879 Predicted E3 ubiquitin 96.4 0.0029 6.2E-08 58.7 3.5 45 455-500 240-287 (298)
167 KOG1813 Predicted E3 ubiquitin 96.2 0.0015 3.2E-08 61.3 0.5 48 455-503 242-289 (313)
168 COG5152 Uncharacterized conser 96.2 0.0021 4.6E-08 56.4 1.4 47 455-502 197-243 (259)
169 KOG0825 PHD Zn-finger protein 96.1 0.0035 7.5E-08 66.0 2.9 52 453-505 122-176 (1134)
170 PF07800 DUF1644: Protein of u 96.0 0.0072 1.6E-07 51.6 3.5 52 454-505 2-96 (162)
171 KOG0804 Cytoplasmic Zn-finger 95.9 0.0053 1.1E-07 60.9 2.8 41 455-498 176-220 (493)
172 KOG1734 Predicted RING-contain 95.9 0.0035 7.6E-08 57.8 1.3 46 454-500 224-281 (328)
173 KOG0828 Predicted E3 ubiquitin 95.9 0.0038 8.3E-08 62.4 1.6 48 452-500 569-634 (636)
174 PF04641 Rtf2: Rtf2 RING-finge 95.6 0.012 2.7E-07 56.4 4.0 51 453-505 112-168 (260)
175 smart00744 RINGv The RING-vari 95.2 0.023 5E-07 39.1 3.1 40 456-496 1-49 (49)
176 KOG1002 Nucleotide excision re 94.8 0.011 2.5E-07 59.5 1.3 49 451-500 533-586 (791)
177 KOG0297 TNF receptor-associate 94.7 0.011 2.4E-07 60.1 0.9 49 453-502 20-69 (391)
178 KOG3039 Uncharacterized conser 94.7 0.024 5.2E-07 51.8 2.9 52 453-505 220-277 (303)
179 KOG1001 Helicase-like transcri 94.1 0.023 5E-07 61.5 1.7 44 455-500 455-500 (674)
180 PF06128 Shigella_OspC: Shigel 94.0 0.32 6.9E-06 44.4 8.3 114 21-143 157-278 (284)
181 KOG3002 Zn finger protein [Gen 93.7 0.036 7.7E-07 53.8 2.0 44 453-501 47-92 (299)
182 PF06128 Shigella_OspC: Shigel 93.5 0.42 9.1E-06 43.7 8.2 94 17-111 179-279 (284)
183 PF03158 DUF249: Multigene fam 93.5 0.67 1.5E-05 41.1 9.2 139 18-176 47-191 (192)
184 KOG3579 Predicted E3 ubiquitin 93.4 0.16 3.4E-06 47.6 5.5 33 455-488 269-306 (352)
185 PF05290 Baculo_IE-1: Baculovi 93.4 0.055 1.2E-06 44.8 2.2 46 455-501 81-133 (140)
186 COG5194 APC11 Component of SCF 93.3 0.095 2.1E-06 39.1 3.2 34 466-500 48-81 (88)
187 PF11793 FANCL_C: FANCL C-term 93.2 0.022 4.7E-07 42.6 -0.3 46 454-500 2-66 (70)
188 PF05883 Baculo_RING: Baculovi 92.8 0.089 1.9E-06 44.0 2.7 32 455-487 27-67 (134)
189 KOG0826 Predicted E3 ubiquitin 92.5 0.074 1.6E-06 50.9 2.1 54 453-507 299-355 (357)
190 KOG2660 Locus-specific chromos 92.5 0.037 7.9E-07 53.2 0.0 50 455-505 16-66 (331)
191 KOG1814 Predicted E3 ubiquitin 92.4 0.071 1.5E-06 52.7 1.9 31 455-486 185-218 (445)
192 COG5219 Uncharacterized conser 92.2 0.065 1.4E-06 58.0 1.5 47 453-500 1468-1523(1525)
193 PF11789 zf-Nse: Zinc-finger o 92.2 0.11 2.3E-06 37.0 2.1 39 455-494 12-53 (57)
194 KOG1428 Inhibitor of type V ad 91.5 0.17 3.8E-06 57.1 3.8 50 452-502 3484-3546(3738)
195 PF03854 zf-P11: P-11 zinc fin 91.5 0.13 2.8E-06 34.3 1.7 46 456-504 4-50 (50)
196 KOG2932 E3 ubiquitin ligase in 90.9 0.053 1.1E-06 51.3 -0.7 44 455-502 91-136 (389)
197 COG5220 TFB3 Cdk activating ki 90.8 0.12 2.6E-06 47.1 1.5 44 454-498 10-62 (314)
198 KOG2113 Predicted RNA binding 90.0 0.24 5.2E-06 47.1 2.7 50 454-505 343-392 (394)
199 PF10272 Tmpp129: Putative tra 87.0 0.69 1.5E-05 46.0 3.9 28 472-500 311-351 (358)
200 KOG3842 Adaptor protein Pellin 86.9 0.7 1.5E-05 44.1 3.6 53 452-505 339-422 (429)
201 PF04710 Pellino: Pellino; In 86.5 0.21 4.5E-06 49.4 0.0 54 453-507 327-411 (416)
202 KOG1493 Anaphase-promoting com 86.5 0.26 5.7E-06 36.5 0.5 28 471-499 50-80 (84)
203 KOG2930 SCF ubiquitin ligase, 86.1 0.57 1.2E-05 36.9 2.2 32 466-498 75-106 (114)
204 KOG2817 Predicted E3 ubiquitin 85.9 0.58 1.3E-05 46.4 2.6 40 467-507 350-394 (394)
205 PF03158 DUF249: Multigene fam 85.1 5.3 0.00011 35.6 7.9 113 16-140 75-191 (192)
206 PF11929 DUF3447: Domain of un 84.9 2.2 4.9E-05 32.3 5.0 47 19-73 8-54 (76)
207 PHA02862 5L protein; Provision 84.7 0.86 1.9E-05 38.5 2.8 45 455-500 3-53 (156)
208 PF10367 Vps39_2: Vacuolar sor 84.1 0.4 8.6E-06 39.1 0.6 29 454-483 78-108 (109)
209 PHA03096 p28-like protein; Pro 83.8 0.68 1.5E-05 44.7 2.1 44 455-499 179-236 (284)
210 KOG4445 Uncharacterized conser 82.8 0.61 1.3E-05 44.2 1.3 45 455-500 116-186 (368)
211 PHA02825 LAP/PHD finger-like p 82.5 1.4 3E-05 38.1 3.2 47 453-500 7-59 (162)
212 COG5222 Uncharacterized conser 81.3 0.86 1.9E-05 43.1 1.7 42 455-497 275-318 (427)
213 PF11929 DUF3447: Domain of un 81.0 2.9 6.3E-05 31.6 4.3 19 122-140 35-53 (76)
214 KOG1941 Acetylcholine receptor 80.5 0.69 1.5E-05 45.4 0.8 45 455-500 366-416 (518)
215 KOG2113 Predicted RNA binding 78.4 0.54 1.2E-05 44.8 -0.6 52 454-505 136-188 (394)
216 KOG3161 Predicted E3 ubiquitin 76.5 1.2 2.6E-05 46.7 1.2 36 455-493 12-51 (861)
217 KOG4362 Transcriptional regula 74.3 0.92 2E-05 48.5 -0.3 47 454-501 21-70 (684)
218 KOG4217 Nuclear receptors of t 72.7 16 0.00035 37.2 7.8 31 450-486 265-297 (605)
219 KOG3113 Uncharacterized conser 72.2 5.6 0.00012 37.0 4.2 50 453-505 110-165 (293)
220 PF04216 FdhE: Protein involve 71.2 1 2.3E-05 44.0 -0.7 51 455-506 173-228 (290)
221 KOG2068 MOT2 transcription fac 70.7 2.6 5.6E-05 41.0 1.8 46 455-501 250-299 (327)
222 PF02891 zf-MIZ: MIZ/SP-RING z 69.1 3.3 7.2E-05 28.5 1.6 43 455-498 3-50 (50)
223 PF14569 zf-UDP: Zinc-binding 68.2 4.2 9E-05 30.5 2.1 45 455-500 10-62 (80)
224 KOG1940 Zn-finger protein [Gen 67.4 1.7 3.8E-05 41.5 -0.1 48 455-504 159-210 (276)
225 KOG3899 Uncharacterized conser 67.2 3.4 7.4E-05 39.1 1.8 28 472-500 325-365 (381)
226 PRK03564 formate dehydrogenase 66.8 2.4 5.2E-05 41.4 0.8 44 454-497 187-234 (309)
227 KOG4185 Predicted E3 ubiquitin 66.6 3.1 6.8E-05 40.7 1.6 31 468-499 23-54 (296)
228 KOG0827 Predicted E3 ubiquitin 65.3 4.7 0.0001 39.9 2.4 37 462-499 15-55 (465)
229 KOG4218 Nuclear hormone recept 64.5 4.2 9.1E-05 39.4 1.9 43 453-499 14-77 (475)
230 KOG2114 Vacuolar assembly/sort 63.5 2.1 4.6E-05 46.6 -0.3 45 453-501 839-884 (933)
231 TIGR01562 FdhE formate dehydro 63.3 2.4 5.1E-05 41.5 0.0 45 454-498 184-233 (305)
232 KOG0298 DEAD box-containing he 63.0 2.2 4.9E-05 48.6 -0.2 44 455-499 1154-1198(1394)
233 PF12906 RINGv: RING-variant d 59.2 5.3 0.00011 27.1 1.1 39 457-495 1-47 (47)
234 KOG3799 Rab3 effector RIM1 and 57.5 5 0.00011 33.3 1.0 28 452-485 63-91 (169)
235 KOG1952 Transcription factor N 54.5 6.4 0.00014 43.0 1.4 45 452-497 189-244 (950)
236 KOG3053 Uncharacterized conser 54.5 8.1 0.00017 36.1 1.8 53 450-502 16-84 (293)
237 PF04423 Rad50_zn_hook: Rad50 50.5 6.6 0.00014 27.5 0.5 12 489-500 20-31 (54)
238 PF08746 zf-RING-like: RING-li 49.9 17 0.00036 24.1 2.4 38 457-495 1-43 (43)
239 KOG1812 Predicted E3 ubiquitin 48.3 6.1 0.00013 40.2 0.1 31 455-486 147-181 (384)
240 KOG1815 Predicted E3 ubiquitin 47.3 11 0.00024 39.2 1.9 31 455-486 71-102 (444)
241 KOG3039 Uncharacterized conser 46.1 14 0.0003 34.4 2.0 33 451-484 40-72 (303)
242 PF13240 zinc_ribbon_2: zinc-r 45.9 3.3 7.2E-05 23.4 -1.3 22 478-499 2-23 (23)
243 KOG3842 Adaptor protein Pellin 45.3 11 0.00024 36.2 1.3 44 462-506 312-357 (429)
244 cd00350 rubredoxin_like Rubred 45.2 7.4 0.00016 24.1 0.1 15 490-504 18-32 (33)
245 COG5183 SSM4 Protein involved 44.6 21 0.00046 38.9 3.3 53 453-506 11-71 (1175)
246 PF10217 DUF2039: Uncharacteri 44.6 6 0.00013 31.0 -0.5 35 455-498 56-90 (92)
247 PLN02436 cellulose synthase A 44.1 14 0.00029 42.1 1.9 45 455-500 37-89 (1094)
248 KOG0513 Ca2+-independent phosp 44.0 1.6 3.5E-05 45.7 -4.9 139 10-166 48-204 (503)
249 PF04710 Pellino: Pellino; In 43.3 7.9 0.00017 38.7 0.0 40 464-505 301-343 (416)
250 PLN02189 cellulose synthase 41.4 16 0.00035 41.5 2.0 45 455-500 35-87 (1040)
251 PF07191 zinc-ribbons_6: zinc- 34.9 2.7 5.9E-05 31.0 -3.5 40 455-500 2-41 (70)
252 PLN02638 cellulose synthase A 33.9 39 0.00085 38.7 3.5 46 454-500 17-70 (1079)
253 KOG1645 RING-finger-containing 33.5 27 0.00059 35.0 2.0 33 467-500 22-56 (463)
254 PF07975 C1_4: TFIIH C1-like d 33.1 25 0.00054 24.3 1.2 25 471-496 26-50 (51)
255 COG5109 Uncharacterized conser 32.9 25 0.00055 33.9 1.6 40 467-507 352-396 (396)
256 PF10571 UPF0547: Uncharacteri 32.3 9 0.0002 22.4 -0.9 19 478-496 3-21 (26)
257 KOG3970 Predicted E3 ubiquitin 31.9 47 0.001 30.4 3.0 45 455-500 51-105 (299)
258 PF02318 FYVE_2: FYVE-type zin 31.3 5.9 0.00013 32.9 -2.6 45 453-498 53-103 (118)
259 PF10083 DUF2321: Uncharacteri 31.2 26 0.00056 30.3 1.2 26 473-502 27-52 (158)
260 COG4306 Uncharacterized protei 30.1 27 0.00059 28.7 1.1 22 477-501 30-51 (160)
261 KOG4335 FERM domain-containing 28.3 52 0.0011 34.1 3.0 107 19-127 105-219 (558)
262 KOG3268 Predicted E3 ubiquitin 28.2 39 0.00085 29.7 1.8 47 453-500 164-228 (234)
263 KOG0513 Ca2+-independent phosp 28.1 1.8 3.9E-05 45.4 -7.5 99 36-146 122-220 (503)
264 PF13248 zf-ribbon_3: zinc-rib 28.0 11 0.00024 21.9 -1.1 21 478-498 5-25 (26)
265 PLN02400 cellulose synthase 27.4 32 0.0007 39.4 1.5 46 454-500 36-89 (1085)
266 KOG2807 RNA polymerase II tran 27.0 31 0.00067 33.6 1.1 41 455-496 331-374 (378)
267 cd00729 rubredoxin_SM Rubredox 26.3 22 0.00049 22.2 0.0 14 491-504 20-33 (34)
268 KOG3836 HLH transcription fact 26.2 15 0.00033 38.8 -1.1 55 57-114 403-457 (605)
269 PF05605 zf-Di19: Drought indu 26.0 22 0.00048 24.7 -0.0 38 455-500 3-42 (54)
270 PF10764 Gin: Inhibitor of sig 25.6 55 0.0012 22.1 1.8 31 456-488 1-31 (46)
271 COG1379 PHP family phosphoeste 24.6 28 0.0006 34.0 0.3 46 456-502 228-278 (403)
272 PLN02195 cellulose synthase A 24.5 55 0.0012 37.2 2.6 45 455-500 7-59 (977)
273 KOG2034 Vacuolar sorting prote 24.3 38 0.00083 37.6 1.3 30 455-485 818-849 (911)
274 KOG0801 Predicted E3 ubiquitin 24.1 32 0.00069 29.8 0.6 23 452-474 175-200 (205)
275 PLN02915 cellulose synthase A 24.0 65 0.0014 36.9 3.0 46 454-500 15-68 (1044)
276 PRK01343 zinc-binding protein; 23.8 32 0.00068 24.4 0.4 11 491-501 11-21 (57)
277 KOG4591 Uncharacterized conser 23.7 65 0.0014 29.2 2.4 42 121-163 224-268 (280)
278 KOG1709 Guanidinoacetate methy 23.5 65 0.0014 29.8 2.4 40 70-111 1-40 (271)
279 KOG4451 Uncharacterized conser 23.3 50 0.0011 30.4 1.6 23 478-500 252-274 (286)
280 cd00730 rubredoxin Rubredoxin; 22.5 35 0.00076 23.5 0.4 14 491-504 36-49 (50)
281 KOG0825 PHD Zn-finger protein 21.9 53 0.0012 35.9 1.8 46 455-501 100-155 (1134)
282 COG3058 FdhE Uncharacterized p 21.8 64 0.0014 30.8 2.1 43 455-497 186-233 (308)
283 PF04053 Coatomer_WDAD: Coatom 21.5 1.7E+02 0.0036 30.6 5.3 107 18-142 322-429 (443)
284 PF14311 DUF4379: Domain of un 20.7 47 0.001 23.2 0.8 23 471-495 33-55 (55)
285 KOG3836 HLH transcription fact 20.3 25 0.00055 37.2 -0.9 64 93-158 403-466 (605)
286 KOG1595 CCCH-type Zn-finger pr 20.2 15 0.00033 38.2 -2.5 89 49-142 57-155 (528)
287 KOG3576 Ovo and related transc 20.1 91 0.002 28.3 2.6 52 451-502 114-186 (267)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.8e-36 Score=254.21 Aligned_cols=170 Identities=26% Similarity=0.252 Sum_probs=161.9
Q ss_pred ccCCchHHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHc-CCCCcccCCCCCCCcHH
Q 010517 13 QRQSKDELLYQWVIAGDVDAIRALRS-QGASLEWMDKEGKTPLIVACMDSGLINVAKTLIEL-GANINAYRPGGRGGTPL 90 (508)
Q Consensus 13 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~-~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~-ga~~n~~~~d~~g~tpL 90 (508)
.|.+|+|||||||..|+.++|++|++ .+..+|.+|..|+||||+||.. |+.|+|+.|+.+ |+++|.. +..|.|+|
T Consensus 34 ~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~-g~~evVk~Ll~r~~advna~--tn~G~T~L 110 (226)
T KOG4412|consen 34 DDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASN-GNDEVVKELLNRSGADVNAT--TNGGQTCL 110 (226)
T ss_pred ccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhc-CcHHHHHHHhcCCCCCccee--cCCCccee
Confidence 35699999999999999999999994 6788999999999999999997 999999999999 9999999 89999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHH
Q 010517 91 HHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKI 170 (508)
Q Consensus 91 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i 170 (508)
|||+.+|+.+|+++|+++|+.++.+|..|.||||-|+..|+++++++|+..|+.+| .+|..|+|||| .|...++.+.
T Consensus 111 HyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n--~qDk~G~TpL~-~al~e~~~d~ 187 (226)
T KOG4412|consen 111 HYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLN--TQDKYGFTPLH-HALAEGHPDV 187 (226)
T ss_pred hhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCC--cccccCccHHH-HHHhccCchH
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999 8988999999
Q ss_pred HHHhhhCCCCCCCCCccc
Q 010517 171 WVVVIPCGTANPSKPLRF 188 (508)
Q Consensus 171 ~~~Ll~~g~~~~~~~~~~ 188 (508)
..+|+.+|++.+..+..+
T Consensus 188 a~lLV~~gAd~~~edke~ 205 (226)
T KOG4412|consen 188 AVLLVRAGADTDREDKEG 205 (226)
T ss_pred HHHHHHhccceeeccccC
Confidence 999999999998888544
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.1e-34 Score=242.34 Aligned_cols=206 Identities=21% Similarity=0.221 Sum_probs=186.2
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCC-CCCccCC-CCChHHHHHHHhCCCHHHHHHHHH-cCCCCcccCCCCCCCcHHHHH
Q 010517 17 KDELLYQWVIAGDVDAIRALRSQGA-SLEWMDK-EGKTPLIVACMDSGLINVAKTLIE-LGANINAYRPGGRGGTPLHHA 93 (508)
Q Consensus 17 g~t~L~~Aa~~g~~~~v~~Ll~~g~-~~~~~d~-~G~TpLh~Aa~~~g~~~~v~~Ll~-~ga~~n~~~~d~~g~tpLh~A 93 (508)
+.++.+.+++.....-|+.|++... .++.++. +|+|||||||.. |+.+++.+|++ .+..+|.+ |..||||||+|
T Consensus 3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~-g~~eiv~fLlsq~nv~~ddk--DdaGWtPlhia 79 (226)
T KOG4412|consen 3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSF-GHVEIVYFLLSQPNVKPDDK--DDAGWTPLHIA 79 (226)
T ss_pred ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeec-CchhHHHHHHhcCCCCCCCc--cccCCchhhhh
Confidence 4678888888888899999998776 6777776 999999999998 99999999994 56667766 89999999999
Q ss_pred HHcCCHHHHHHHHHC-CCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHHHH
Q 010517 94 AKRGLEPTVRLLLSC-GANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWV 172 (508)
Q Consensus 94 ~~~g~~~~v~~Ll~~-ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~ 172 (508)
+..|+.++|+.|+.+ |+|+|..++.|.|+||||+.+|..+|+++|+++|+.++ ++|..|.|||| -|+..|..++++
T Consensus 80 ~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~--~kD~~~qtplH-RAAavGklkvie 156 (226)
T KOG4412|consen 80 ASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIR--IKDKQGQTPLH-RAAAVGKLKVIE 156 (226)
T ss_pred hhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCc--ccccccCchhH-HHHhccchhhHH
Confidence 999999999999998 99999999999999999999999999999999999999 99999999999 999999999999
Q ss_pred HhhhCCCCCCCCCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhHhhh
Q 010517 173 VVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFAS 239 (508)
Q Consensus 173 ~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~~a~ 239 (508)
+|+..|+..+.+|..+.+++|.+.-+++++....|+.. ++| +...|++| |++..+.
T Consensus 157 ~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~--------gAd--~~~edke~-t~~~~a~ 212 (226)
T KOG4412|consen 157 YLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRA--------GAD--TDREDKEG-TALRIAC 212 (226)
T ss_pred HHHhcCCCCCcccccCccHHHHHHhccCchHHHHHHHh--------ccc--eeeccccC-chHHHHH
Confidence 99999999999999999999999877787766654443 777 88889988 9988775
No 3
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=1.4e-32 Score=265.22 Aligned_cols=206 Identities=15% Similarity=0.131 Sum_probs=182.5
Q ss_pred cccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcH
Q 010517 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTP 89 (508)
Q Consensus 10 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tp 89 (508)
.+.+|.+|.||||+|+..|+.+++++|+++|++++..+ |.||||+|+.. |+.+++++|+++|++++.+ |..|+||
T Consensus 23 a~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~-g~~eiV~lLL~~Gadvn~~--d~~G~Tp 97 (284)
T PHA02791 23 AFKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATL-EDTKIVKILLFSGMDDSQF--DDKGNTA 97 (284)
T ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHC-CCHHHHHHHHHCCCCCCCC--CCCCCCH
Confidence 35679999999999999999999999999999988764 78999999997 9999999999999999998 8899999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCccccCCCCC-cHHHHHHHhCCHHHHHHHHHcCCcccccccc-cCCCCHHHHHHhhcCC
Q 010517 90 LHHAAKRGLEPTVRLLLSCGANALVRNDDCH-TALGVARIKGHINVVRAIESHICYFCGWLRE-FYGPSFLEALAPQLMS 167 (508)
Q Consensus 90 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~-TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~-~~g~tpL~~~A~~~~~ 167 (508)
||+|+..|+.+++++|+++|++++.++..|. ||||+|+..|+.+++++|++++.+.. | ..|.|||| +|+..|+
T Consensus 98 Lh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~----d~~~g~TpLh-~Aa~~g~ 172 (284)
T PHA02791 98 LYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF----DLAILLSCIH-ITIKNGH 172 (284)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCccc----ccccCccHHH-HHHHcCC
Confidence 9999999999999999999999999999885 89999999999999999999976542 3 35899999 9999999
Q ss_pred HHHHHHhhhCCCCCCCCCcccccc-ccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhH
Q 010517 168 RKIWVVVIPCGTANPSKPLRFELV-IYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYK 236 (508)
Q Consensus 168 ~~i~~~Ll~~g~~~~~~~~~~~~~-l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~ 236 (508)
.+++++|+++|++++.++..+.++ ++.++..++...+..|+ .+|++ ++.+|.++ +++.
T Consensus 173 ~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl--------~~Ga~--in~~~~~~-~~l~ 231 (284)
T PHA02791 173 VDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALF--------KYDIN--IYSVNLEN-VLLD 231 (284)
T ss_pred HHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHH--------HCCCC--CccCcccC-ccCC
Confidence 999999999999999988777776 89999888866555444 34788 78888854 5553
No 4
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.98 E-value=3.6e-31 Score=274.70 Aligned_cols=225 Identities=17% Similarity=0.187 Sum_probs=199.8
Q ss_pred cccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCC-------------
Q 010517 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGAN------------- 76 (508)
Q Consensus 10 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~------------- 76 (508)
.+..+..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+.. |+.+++++|+++|++
T Consensus 28 ~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~-~~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 106 (434)
T PHA02874 28 INISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKI-GAHDIIKLLIDNGVDTSILPIPCIEKDM 106 (434)
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHCCCCCCcchhccCCHHH
Confidence 456678899999999999999999999999999999999999999999997 999999999887754
Q ss_pred ----------CcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCccc
Q 010517 77 ----------INAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (508)
Q Consensus 77 ----------~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~ 146 (508)
++.+ |..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 107 i~~ll~~g~d~n~~--~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n 184 (434)
T PHA02874 107 IKTILDCGIDVNIK--DAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYAN 184 (434)
T ss_pred HHHHHHCcCCCCCC--CCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC
Confidence 4555 7889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCHHHHHHhhcCCHHHHHHhhhCCCCCCCCCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCccee
Q 010517 147 GWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTI 226 (508)
Q Consensus 147 ~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~ 226 (508)
.++..|.|||| +|+..|+.+++++|+++|+++...+..+.++++.++..... ++.++. .+.+ ++.
T Consensus 185 --~~~~~g~tpL~-~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~--~i~~Ll--------~~~~--in~ 249 (434)
T PHA02874 185 --VKDNNGESPLH-NAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRS--AIELLI--------NNAS--IND 249 (434)
T ss_pred --CCCCCCCCHHH-HHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChH--HHHHHH--------cCCC--CCC
Confidence 89999999999 99999999999999999999998888899999998876542 222111 2555 788
Q ss_pred ccCCCcchhHhhhhcCCChhHHHHHH
Q 010517 227 YDQATKIRYKFASANEGDKHQLQWLD 252 (508)
Q Consensus 227 ~d~~~~t~l~~a~~~~~~~~~l~~l~ 252 (508)
.|..|.||||+|+........++.|.
T Consensus 250 ~d~~G~TpLh~A~~~~~~~~iv~~Ll 275 (434)
T PHA02874 250 QDIDGSTPLHHAINPPCDIDIIDILL 275 (434)
T ss_pred cCCCCCCHHHHHHhcCCcHHHHHHHH
Confidence 89999999999987666666666665
No 5
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.97 E-value=8.3e-31 Score=275.19 Aligned_cols=211 Identities=20% Similarity=0.181 Sum_probs=185.8
Q ss_pred ccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCH----------------------------
Q 010517 13 QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLI---------------------------- 64 (508)
Q Consensus 13 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~---------------------------- 64 (508)
.+..+.||||+|+..|+.++|++|+++|+++|.+|.+|.||||+||.. |+.
T Consensus 33 ~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~ 111 (477)
T PHA02878 33 ASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKE-PNKLGMKEMIRSINKCSVFYTLVAIKDAFNN 111 (477)
T ss_pred ccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC-ccHhHHHHHHHHHhccccccchhhHHHHHHc
Confidence 345788999999999999999999999999999999999999999975 332
Q ss_pred ------------------------------------HHHHHHHHcCCCCcccCCCCC-CCcHHHHHHHcCCHHHHHHHHH
Q 010517 65 ------------------------------------NVAKTLIELGANINAYRPGGR-GGTPLHHAAKRGLEPTVRLLLS 107 (508)
Q Consensus 65 ------------------------------------~~v~~Ll~~ga~~n~~~~d~~-g~tpLh~A~~~g~~~~v~~Ll~ 107 (508)
+++++|+++|++++.. +.. |+||||+|+..|+.+++++|++
T Consensus 112 ~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~--~~~~g~tpLh~A~~~~~~~iv~~Ll~ 189 (477)
T PHA02878 112 RNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMK--DRHKGNTALHYATENKDQRLTELLLS 189 (477)
T ss_pred CCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCcc--CCCCCCCHHHHHHhCCCHHHHHHHHH
Confidence 3778888899999988 666 9999999999999999999999
Q ss_pred CCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhh-cCCHHHHHHhhhCCCCCCCCCc
Q 010517 108 CGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ-LMSRKIWVVVIPCGTANPSKPL 186 (508)
Q Consensus 108 ~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~-~~~~~i~~~Ll~~g~~~~~~~~ 186 (508)
+|++++..|..|.||||+|+..|+.+++++|++.|++++ .+|..|.|||| +|+. .++.+++++|+++|++++..+.
T Consensus 190 ~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in--~~d~~g~TpLh-~A~~~~~~~~iv~~Ll~~gadvn~~~~ 266 (477)
T PHA02878 190 YGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTD--ARDKCGNTPLH-ISVGYCKDYDILKLLLEHGVDVNAKSY 266 (477)
T ss_pred CCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC--CCCCCCCCHHH-HHHHhcCCHHHHHHHHHcCCCCCccCC
Confidence 999999999999999999999999999999999999999 99999999999 7775 4789999999999999988774
Q ss_pred -cccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhHhhhhc
Q 010517 187 -RFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASAN 241 (508)
Q Consensus 187 -~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~~a~~~ 241 (508)
.+.+++|.+.. ..+.+. .+..+++| ++..|..|.||+++|...
T Consensus 267 ~~g~TpLh~A~~--~~~~v~--------~Ll~~gad--in~~d~~g~TpL~~A~~~ 310 (477)
T PHA02878 267 ILGLTALHSSIK--SERKLK--------LLLEYGAD--INSLNSYKLTPLSSAVKQ 310 (477)
T ss_pred CCCCCHHHHHcc--CHHHHH--------HHHHCCCC--CCCcCCCCCCHHHHHHHH
Confidence 68899999842 322222 23345888 889999999999999864
No 6
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.97 E-value=6.3e-30 Score=265.42 Aligned_cols=230 Identities=20% Similarity=0.173 Sum_probs=198.6
Q ss_pred ccCcccccCCchHHHHHHHHcCCHHHHHHHHHcCC-----------------------CCCccCCCCChHHHHHHHhCCC
Q 010517 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGA-----------------------SLEWMDKEGKTPLIVACMDSGL 63 (508)
Q Consensus 7 ~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-----------------------~~~~~d~~G~TpLh~Aa~~~g~ 63 (508)
+.+++..+..|.||||+|+..|+.++|++|+++|+ +++.+|..|.||||+|+.. |+
T Consensus 58 Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~-~~ 136 (434)
T PHA02874 58 GADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKK-GD 136 (434)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHC-CC
Confidence 34566778899999999999999999999988764 5677889999999999997 99
Q ss_pred HHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCC
Q 010517 64 INVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHIC 143 (508)
Q Consensus 64 ~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga 143 (508)
.+++++|+++|++++.+ |..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++.|+
T Consensus 137 ~~~v~~Ll~~gad~n~~--d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~ 214 (434)
T PHA02874 137 LESIKMLFEYGADVNIE--DDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGN 214 (434)
T ss_pred HHHHHHHHhCCCCCCCc--CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 99999999999999998 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCHHHHHHhhcCCHHHHHHhhhCCCCCCCCCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCc
Q 010517 144 YFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPS 223 (508)
Q Consensus 144 ~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~ 223 (508)
+++ .++..|.|||| .|+..+. +++++|+ .|++++.++..+.+++|.+++......++.++ ..+++|
T Consensus 215 ~i~--~~~~~g~TpL~-~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~L-------l~~gad-- 280 (434)
T PHA02874 215 HIM--NKCKNGFTPLH-NAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDIL-------LYHKAD-- 280 (434)
T ss_pred CCc--CCCCCCCCHHH-HHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHH-------HHCcCC--
Confidence 998 88999999999 8888765 5666666 68889999989999999998765433333322 234778
Q ss_pred ceeccCCCcchhHhhhhcCCChhHHHHHHH
Q 010517 224 LTIYDQATKIRYKFASANEGDKHQLQWLDN 253 (508)
Q Consensus 224 i~~~d~~~~t~l~~a~~~~~~~~~l~~l~~ 253 (508)
++.+|..|+||+++|.........++.+..
T Consensus 281 ~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~ 310 (434)
T PHA02874 281 ISIKDNKGENPIDTAFKYINKDPVIKDIIA 310 (434)
T ss_pred CCCCCCCCCCHHHHHHHhCCccHHHHHHHH
Confidence 888999999999999876545555555553
No 7
>PHA02946 ankyin-like protein; Provisional
Probab=99.97 E-value=3.4e-30 Score=266.10 Aligned_cols=240 Identities=16% Similarity=0.137 Sum_probs=194.7
Q ss_pred cccCcccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCC--CHHHHHHHHHcCCCCcccCCC
Q 010517 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSG--LINVAKTLIELGANINAYRPG 83 (508)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g--~~~~v~~Ll~~ga~~n~~~~d 83 (508)
.+.++|.+|..|.||||+|+..|+.++|++||++|+++|.+|.+|.||||+|+.. + ..+++++|+++|+++|... |
T Consensus 61 ~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~-~~~~~e~v~lLl~~Gadin~~~-d 138 (446)
T PHA02946 61 RGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGT-DDEVIERINLLVQYGAKINNSV-D 138 (446)
T ss_pred CcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc-CCchHHHHHHHHHcCCCccccc-C
Confidence 3567888999999999999999999999999999999999999999999999875 4 4899999999999999632 7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCC--HHHHHHHHHcCCcccccccccCCCCHHHHH
Q 010517 84 GRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGH--INVVRAIESHICYFCGWLREFYGPSFLEAL 161 (508)
Q Consensus 84 ~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~--~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~ 161 (508)
..|.|||| |+..|+.+++++|++.|++++.+|..|.||||+|+..++ .+++++|++.|++++ .+|.+|.|||| +
T Consensus 139 ~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin--~~d~~G~TpLH-~ 214 (446)
T PHA02946 139 EEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPS--KPDHDGNTPLH-I 214 (446)
T ss_pred CCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCc--ccCCCCCCHHH-H
Confidence 89999997 677899999999999999999999999999999987654 689999999999999 89999999999 8
Q ss_pred HhhcC--CHHHHHHhhhCCCCCCCCCccccccccccccccChHHHHHHHHhhhcCCC--------CCCCCC---cceec-
Q 010517 162 APQLM--SRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPK--------FHQPDP---SLTIY- 227 (508)
Q Consensus 162 A~~~~--~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~--------~~~~d~---~i~~~- 227 (508)
|+..+ +.+++++|+. |++++.++..+.++++.++.......+..++........ ..+.+. .++..
T Consensus 215 Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g 293 (446)
T PHA02946 215 VCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKG 293 (446)
T ss_pred HHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcC
Confidence 88875 7899999885 899999999999999999988775444433322111000 000110 01111
Q ss_pred cCCCcchhHhhhhcCCChhHHHHHHH
Q 010517 228 DQATKIRYKFASANEGDKHQLQWLDN 253 (508)
Q Consensus 228 d~~~~t~l~~a~~~~~~~~~l~~l~~ 253 (508)
+..|+||||+|+. .+....++.|..
T Consensus 294 ~~~~~TpLh~Aa~-~g~~eivk~Ll~ 318 (446)
T PHA02946 294 KQYDSTDFKMAVE-VGSIRCVKYLLD 318 (446)
T ss_pred cccCCCHHHHHHH-cCCHHHHHHHHH
Confidence 2356799999986 455666666663
No 8
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.97 E-value=2.1e-30 Score=275.92 Aligned_cols=180 Identities=16% Similarity=0.133 Sum_probs=132.0
Q ss_pred cCcccc-cCCchHHHHHHHH--cCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCC--HHHHHHHHHcCCCCcccCC
Q 010517 8 MNQHQQ-RQSKDELLYQWVI--AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGL--INVAKTLIELGANINAYRP 82 (508)
Q Consensus 8 ~~~~~~-~~~g~t~L~~Aa~--~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~--~~~v~~Ll~~ga~~n~~~~ 82 (508)
.++|.+ |..|.||||+|+. .++.++|++|+++|+++|.+|..|.||||+|+.. |+ .++|++|+++|+++|.+
T Consensus 167 ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~-g~~~~eIVklLLe~GADVN~k-- 243 (764)
T PHA02716 167 VNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLIT-GNVCASVIKKIIELGGDMDMK-- 243 (764)
T ss_pred CCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc-CCCCHHHHHHHHHcCCCCCCC--
Confidence 455666 6777888887654 3567788888888888877777788888888776 53 47788888888888777
Q ss_pred CCCCCcHHHHH-------------------------------------HHcCCHHHHHHHHHCCCCccccCCCCCcHHHH
Q 010517 83 GGRGGTPLHHA-------------------------------------AKRGLEPTVRLLLSCGANALVRNDDCHTALGV 125 (508)
Q Consensus 83 d~~g~tpLh~A-------------------------------------~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~ 125 (508)
|..|+||||+| +..|+.+++++|+++|++++.+|..|+||||+
T Consensus 244 D~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~ 323 (764)
T PHA02716 244 CVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQ 323 (764)
T ss_pred CCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHH
Confidence 67777887754 34577788888888888777777778888887
Q ss_pred HHH--hCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhh--------------cCCHHHHHHhhhCCCCCCCCCcccc
Q 010517 126 ARI--KGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ--------------LMSRKIWVVVIPCGTANPSKPLRFE 189 (508)
Q Consensus 126 A~~--~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~--------------~~~~~i~~~Ll~~g~~~~~~~~~~~ 189 (508)
|+. .++.+++++|+++|++++ .+|..|+|||| +|+. .++.+++++|+++|++++.++..+.
T Consensus 324 Aaa~~~~~~eIVklLLe~GADIN--~kD~~G~TPLH-~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~ 400 (764)
T PHA02716 324 YILRHNISTDIIKLLHEYGNDLN--EPDNIGNTVLH-TYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGY 400 (764)
T ss_pred HHHHhCCCchHHHHHHHcCCCCc--cCCCCCCCHHH-HHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCC
Confidence 654 346777888888887777 77777888887 5543 2567788888888877777777777
Q ss_pred cccc
Q 010517 190 LVIY 193 (508)
Q Consensus 190 ~~l~ 193 (508)
++++
T Consensus 401 TPLh 404 (764)
T PHA02716 401 TPLT 404 (764)
T ss_pred ChHH
Confidence 7775
No 9
>PHA02791 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.1e-29 Score=245.01 Aligned_cols=163 Identities=17% Similarity=0.103 Sum_probs=152.4
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCC-cHHHHHH
Q 010517 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGG-TPLHHAA 94 (508)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~-tpLh~A~ 94 (508)
+|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.+ +..|+ ||||+|+
T Consensus 60 d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~-g~~eivk~Ll~~gadin~~--~~~g~~TpL~~Aa 136 (284)
T PHA02791 60 ENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDS-GNMQTVKLFVKKNWRLMFY--GKTGWKTSFYHAV 136 (284)
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHCCCCcCcc--CCCCCcHHHHHHH
Confidence 478999999999999999999999999999999999999999998 9999999999999999988 67774 8999999
Q ss_pred HcCCHHHHHHHHHCCCCccccC-CCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCH-HHHHHhhcCCHHHHH
Q 010517 95 KRGLEPTVRLLLSCGANALVRN-DDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSF-LEALAPQLMSRKIWV 172 (508)
Q Consensus 95 ~~g~~~~v~~Ll~~ga~~~~~d-~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tp-L~~~A~~~~~~~i~~ 172 (508)
..|+.+++++|++++.+. .| ..|.||||+|+..|+.+++++|+++|++++ .+|..|.|| || +|+..|+.++++
T Consensus 137 ~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n--~~d~~g~t~~L~-~Aa~~~~~e~v~ 211 (284)
T PHA02791 137 MLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTN--TNNSLLFIPDIK-LAIDNKDLEMLQ 211 (284)
T ss_pred HcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCC--cccCCCCChHHH-HHHHcCCHHHHH
Confidence 999999999999987653 23 358999999999999999999999999999 889999987 99 999999999999
Q ss_pred HhhhCCCCCCCCCc
Q 010517 173 VVIPCGTANPSKPL 186 (508)
Q Consensus 173 ~Ll~~g~~~~~~~~ 186 (508)
+|+++|++++.++.
T Consensus 212 lLl~~Ga~in~~~~ 225 (284)
T PHA02791 212 ALFKYDINIYSVNL 225 (284)
T ss_pred HHHHCCCCCccCcc
Confidence 99999999998885
No 10
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.2e-29 Score=267.10 Aligned_cols=213 Identities=17% Similarity=0.174 Sum_probs=101.5
Q ss_pred ccccCCchHHHHH-----HHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHH--HhCCCHHHHHHHHHcCCCCcccCCC
Q 010517 11 HQQRQSKDELLYQ-----WVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVAC--MDSGLINVAKTLIELGANINAYRPG 83 (508)
Q Consensus 11 ~~~~~~g~t~L~~-----Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa--~~~g~~~~v~~Ll~~ga~~n~~~~d 83 (508)
+..+..|.||||+ |+..|+.+++++|+++|++++..|..|.||||+|+ .. |+.+++++|+++|++++.. +
T Consensus 62 ~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~-~~~~iv~~Ll~~g~~~~~~--~ 138 (480)
T PHA03100 62 NSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKS-NSYSIVEYLLDNGANVNIK--N 138 (480)
T ss_pred CCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhccc-ChHHHHHHHHHcCCCCCcc--C
Confidence 3334444444444 44444444444444444444444444444444444 43 4444444444444444444 4
Q ss_pred CCCCcHHHHHHHcC--CHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCC------C
Q 010517 84 GRGGTPLHHAAKRG--LEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYG------P 155 (508)
Q Consensus 84 ~~g~tpLh~A~~~g--~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g------~ 155 (508)
..|.||||+|+..| +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..| .
T Consensus 139 ~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~--~~~~~~~~~~~~~ 216 (480)
T PHA03100 139 SDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADIN--AGDIETLLFTIFE 216 (480)
T ss_pred CCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCcc--CCCCCCCcHHHHH
Confidence 44444444444444 4444444444444444444444445554444444444444444444444 444444 4
Q ss_pred CHHHHHHhhcCC--HHHHHHhhhCCCCCCCCCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcc
Q 010517 156 SFLEALAPQLMS--RKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKI 233 (508)
Q Consensus 156 tpL~~~A~~~~~--~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t 233 (508)
|||| .|+..++ .+++++|+++|++++.++..+.++++.++..+....+..|+ ..|+| ++..|..|.|
T Consensus 217 t~l~-~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll--------~~gad--~n~~d~~g~t 285 (480)
T PHA03100 217 TPLH-IAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLL--------DLGAN--PNLVNKYGDT 285 (480)
T ss_pred hHHH-HHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH--------HcCCC--CCccCCCCCc
Confidence 4444 4444444 45555555555544444444455555554444433222222 12444 4445555555
Q ss_pred hhHhhh
Q 010517 234 RYKFAS 239 (508)
Q Consensus 234 ~l~~a~ 239 (508)
|+++|.
T Consensus 286 pl~~A~ 291 (480)
T PHA03100 286 PLHIAI 291 (480)
T ss_pred HHHHHH
Confidence 555554
No 11
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.4e-29 Score=261.40 Aligned_cols=220 Identities=17% Similarity=0.141 Sum_probs=192.8
Q ss_pred ccCcccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCC
Q 010517 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (508)
Q Consensus 7 ~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g 86 (508)
+.+.+.++..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+.. |+.+++++|++.|++.+... +..|
T Consensus 25 g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~-~~~g 102 (413)
T PHA02875 25 GINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEE-GDVKAVEELLDLGKFADDVF-YKDG 102 (413)
T ss_pred CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHC-CCHHHHHHHHHcCCcccccc-cCCC
Confidence 456677888999999999999999999999999999999999999999999997 99999999999998775432 6789
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcC
Q 010517 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLM 166 (508)
Q Consensus 87 ~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~ 166 (508)
+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++ .+|..|.|||| +|+..|
T Consensus 103 ~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~--~~d~~g~TpL~-~A~~~g 179 (413)
T PHA02875 103 MTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLD--IEDCCGCTPLI-IAMAKG 179 (413)
T ss_pred CCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC--CCCCCCCCHHH-HHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999 89999999999 999999
Q ss_pred CHHHHHHhhhCCCCCCCCCcccc-ccccccccccChHHHHHHHHhhhcCCCCCCCCCcce-eccCCCcchhHhhh
Q 010517 167 SRKIWVVVIPCGTANPSKPLRFE-LVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLT-IYDQATKIRYKFAS 239 (508)
Q Consensus 167 ~~~i~~~Ll~~g~~~~~~~~~~~-~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~-~~d~~~~t~l~~a~ 239 (508)
+.+++++|+++|++++..+..+. ++++.++..+..+.+..|+. +|+|+.+. ..++++.|+++++.
T Consensus 180 ~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~--------~gad~n~~~~~~~~~~t~l~~~~ 246 (413)
T PHA02875 180 DIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIK--------RGADCNIMFMIEGEECTILDMIC 246 (413)
T ss_pred CHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHH--------CCcCcchHhhcCCCchHHHHHHH
Confidence 99999999999999988876665 55666888877665554443 36674332 34677889998765
No 12
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.97 E-value=1.1e-29 Score=270.44 Aligned_cols=171 Identities=18% Similarity=0.186 Sum_probs=152.2
Q ss_pred cccCcccccCCchHHHHHHHHcCC--HHHHHHHHHcCCCCCccCCCCChHHHHHH-------------------------
Q 010517 6 NSMNQHQQRQSKDELLYQWVIAGD--VDAIRALRSQGASLEWMDKEGKTPLIVAC------------------------- 58 (508)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~Aa~~g~--~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa------------------------- 58 (508)
++.++|.+|..|.||||+|+..|+ .++|++||++|+|+|.+|..|.||||+|+
T Consensus 201 ~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~ 280 (764)
T PHA02716 201 NGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKN 280 (764)
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhcccccccc
Confidence 456788899999999999999995 59999999999999999999999999763
Q ss_pred ------------HhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHH--cCCHHHHHHHHHCCCCccccCCCCCcHHH
Q 010517 59 ------------MDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK--RGLEPTVRLLLSCGANALVRNDDCHTALG 124 (508)
Q Consensus 59 ------------~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~--~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh 124 (508)
.. |+.+++++|+++|+++|.+ |..|+||||+|+. .++.+++++|+++|++++.+|..|+||||
T Consensus 281 ~~~~L~~~i~AA~~-g~leiVklLLe~GAdIN~k--D~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH 357 (764)
T PHA02716 281 IPMILHSYITLARN-IDISVVYSFLQPGVKLHYK--DSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLH 357 (764)
T ss_pred chhhhHHHHHHHHc-CCHHHHHHHHhCCCceecc--CCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHH
Confidence 33 7889999999999999998 8899999999875 46899999999999999999999999999
Q ss_pred HHHH--------------hCCHHHHHHHHHcCCcccccccccCCCCHHHHH---HhhcCCHHHHHHhhhCCCCC
Q 010517 125 VARI--------------KGHINVVRAIESHICYFCGWLREFYGPSFLEAL---APQLMSRKIWVVVIPCGTAN 181 (508)
Q Consensus 125 ~A~~--------------~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~---A~~~~~~~i~~~Ll~~g~~~ 181 (508)
+|+. .++.+++++|+++|++++ .+|..|+||||.+ +...++.+++++|++.|+..
T Consensus 358 ~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn--~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~ 429 (764)
T PHA02716 358 TYLSMLSVVNILDPETDNDIRLDVIQCLISLGADIT--AVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLN 429 (764)
T ss_pred HHHHhhhhhccccccccccChHHHHHHHHHCCCCCC--CcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchh
Confidence 9875 368999999999999999 9999999999932 23457899999999988654
No 13
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97 E-value=2.8e-30 Score=259.42 Aligned_cols=210 Identities=25% Similarity=0.243 Sum_probs=186.7
Q ss_pred chHHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHH
Q 010517 17 KDELLYQWVIAGDVDAIRALRSQ-GASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK 95 (508)
Q Consensus 17 g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~ 95 (508)
-...++.|++.|+++.|+.|++. |.+++..|.+|.|+|||||.+ ++++++++|+++|+++|... ...+.||||+|++
T Consensus 44 ~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiN-Nrl~v~r~li~~gadvn~~g-G~l~stPLHWAar 121 (600)
T KOG0509|consen 44 SLDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAIN-NRLDVARYLISHGADVNAIG-GVLGSTPLHWAAR 121 (600)
T ss_pred hhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHc-CcHHHHHHHHHcCCCccccC-CCCCCCcchHHHH
Confidence 35778999999999999999998 999999999999999999998 99999999999999999984 3778999999999
Q ss_pred cCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHHHHHhh
Q 010517 96 RGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVI 175 (508)
Q Consensus 96 ~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll 175 (508)
+|+..+|.+|+++|||++.+|.+|.||||+|++.|+.-+|-+|+.++++++ ++|.+|+|||| +|+.+++...+..|+
T Consensus 122 ~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d--~~D~~grTpLm-wAaykg~~~~v~~LL 198 (600)
T KOG0509|consen 122 NGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADID--LRDNNGRTPLM-WAAYKGFALFVRRLL 198 (600)
T ss_pred cCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCC--CcCCCCCCHHH-HHHHhcccHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 99999999999 999999988888999
Q ss_pred hCCCCCCCCC-ccccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhHhhhhc
Q 010517 176 PCGTANPSKP-LRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASAN 241 (508)
Q Consensus 176 ~~g~~~~~~~-~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~~a~~~ 241 (508)
.-|+....++ .++.+++|.++..++...+. ++ ...+.+ ....|.+|+||+.+|.+.
T Consensus 199 ~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~-Ll-------~~g~~~--~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 199 KFGASLLLTDDNHGNTPLHWAVVGGNLTAVK-LL-------LEGGAD--LDKTNTNGKTPFDLAQER 255 (600)
T ss_pred HhcccccccccccCCchHHHHHhcCCcceEe-hh-------hhcCCc--ccccccCCCCHHHHHHHh
Confidence 9999888777 78999999998888854444 22 223556 777788899999999766
No 14
>PHA03095 ankyrin-like protein; Provisional
Probab=99.97 E-value=3.2e-29 Score=263.32 Aligned_cols=231 Identities=18% Similarity=0.130 Sum_probs=199.9
Q ss_pred ccCcccccCCchHHHHHHHHcC---CHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCC-CHHHHHHHHHcCCCCcccCC
Q 010517 7 SMNQHQQRQSKDELLYQWVIAG---DVDAIRALRSQGASLEWMDKEGKTPLIVACMDSG-LINVAKTLIELGANINAYRP 82 (508)
Q Consensus 7 ~~~~~~~~~~g~t~L~~Aa~~g---~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g-~~~~v~~Ll~~ga~~n~~~~ 82 (508)
+.+++.++..|.||||+|+..| +.+++++|+++|+++|.+|..|.||||+|+.. | +.+++++|+++|++++.+
T Consensus 37 ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~-~~~~~iv~lLl~~ga~in~~-- 113 (471)
T PHA03095 37 GADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYN-ATTLDVIKLLIKAGADVNAK-- 113 (471)
T ss_pred CCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CCcHHHHHHHHHcCCCCCCC--
Confidence 4567788999999999999998 99999999999999999999999999999998 7 699999999999999998
Q ss_pred CCCCCcHHHHHH--HcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhC--CHHHHHHHHHcCCcccccccccCCCCHH
Q 010517 83 GGRGGTPLHHAA--KRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKG--HINVVRAIESHICYFCGWLREFYGPSFL 158 (508)
Q Consensus 83 d~~g~tpLh~A~--~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g--~~~~v~~Ll~~ga~~~~~~~~~~g~tpL 158 (508)
|..|+||||+|+ ..++.+++++|+++|++++..|..|.||||+|+..+ +.+++++|++.|++++ ..|..|.|||
T Consensus 114 ~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~--~~d~~g~t~L 191 (471)
T PHA03095 114 DKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVY--AVDDRFRSLL 191 (471)
T ss_pred CCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCc--ccCCCCCCHH
Confidence 889999999999 567899999999999999999999999999999876 6899999999999998 6699999999
Q ss_pred HHHHhh--cCCHHHHHHhhhCCCCCCCCCccccccccccccccChHH-HHHHHHhhhcCCCCCCCCCcceeccCCCcchh
Q 010517 159 EALAPQ--LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRA-VIALWKAKIDEPKFHQPDPSLTIYDQATKIRY 235 (508)
Q Consensus 159 ~~~A~~--~~~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~-v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l 235 (508)
| .++. .+..+++++|+++|++.+.++..+.+++|.++..+..+. ++. .+...+.+ ++..|..|+|||
T Consensus 192 h-~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~-------~ll~~g~d--in~~d~~g~TpL 261 (471)
T PHA03095 192 H-HHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVL-------PLLIAGIS--INARNRYGQTPL 261 (471)
T ss_pred H-HHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHH-------HHHHcCCC--CCCcCCCCCCHH
Confidence 9 6664 477899999999999999999999999999987765432 221 12233677 888999999999
Q ss_pred HhhhhcCCChhHHHHHHH
Q 010517 236 KFASANEGDKHQLQWLDN 253 (508)
Q Consensus 236 ~~a~~~~~~~~~l~~l~~ 253 (508)
|+|+.. +....++.|..
T Consensus 262 h~A~~~-~~~~~v~~LL~ 278 (471)
T PHA03095 262 HYAAVF-NNPRACRRLIA 278 (471)
T ss_pred HHHHHc-CCHHHHHHHHH
Confidence 999853 45566666663
No 15
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97 E-value=2e-30 Score=260.46 Aligned_cols=186 Identities=25% Similarity=0.214 Sum_probs=173.3
Q ss_pred ccCcccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCC
Q 010517 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMD-KEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (508)
Q Consensus 7 ~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d-~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~ 85 (508)
...++..|.+|-|+|||||.+++++++++||++|+++|... .-|.||||||+++ |++.+|++|+++|||++.+ |.+
T Consensus 68 g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~-G~~~vv~lLlqhGAdpt~~--D~~ 144 (600)
T KOG0509|consen 68 GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARN-GHISVVDLLLQHGADPTLK--DKQ 144 (600)
T ss_pred CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHc-CcHHHHHHHHHcCCCCcee--cCC
Confidence 34567788999999999999999999999999999999998 6799999999998 9999999999999999999 899
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccc-cCCCCHHHHHHhh
Q 010517 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLRE-FYGPSFLEALAPQ 164 (508)
Q Consensus 86 g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~-~~g~tpL~~~A~~ 164 (508)
|.+|||+|+..|+.-+|-+||.+|++++.+|.+|+||||+|+.+|+...++.||+.++.+. .+| .+|.|||| +|+.
T Consensus 145 G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~--~~d~~~g~TpLH-wa~~ 221 (600)
T KOG0509|consen 145 GLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLL--LTDDNHGNTPLH-WAVV 221 (600)
T ss_pred CCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccc--ccccccCCchHH-HHHh
Confidence 9999999999999999999999999999999999999999999999988999999999998 555 99999999 9999
Q ss_pred cCCHHHHHHhhhCCCCCCCCCccccccccccccc
Q 010517 165 LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQD 198 (508)
Q Consensus 165 ~~~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~ 198 (508)
.|+.+++.+|++.|++.+.++..++++...+.+.
T Consensus 222 ~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 222 GGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred cCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 9999999977888888888888888887777544
No 16
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.97 E-value=2.4e-29 Score=264.98 Aligned_cols=227 Identities=21% Similarity=0.202 Sum_probs=203.2
Q ss_pred cccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHH-----HHHhCCCHHHHHHHHHcCCCCcccCCCC
Q 010517 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIV-----ACMDSGLINVAKTLIELGANINAYRPGG 84 (508)
Q Consensus 10 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~-----Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~ 84 (508)
.+.++..+.||||+|+..|+.++|++|+++|++++..+..|.||||+ |+.. ++.+++++|+++|++++.. |.
T Consensus 28 ~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~-~~~~iv~~Ll~~ga~i~~~--d~ 104 (480)
T PHA03100 28 NDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLT-DVKEIVKLLLEYGANVNAP--DN 104 (480)
T ss_pred chhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhh-chHHHHHHHHHCCCCCCCC--CC
Confidence 34567889999999999999999999999999999999999999999 9997 9999999999999999988 88
Q ss_pred CCCcHHHHHH--HcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhC--CHHHHHHHHHcCCcccccccccCCCCHHHH
Q 010517 85 RGGTPLHHAA--KRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKG--HINVVRAIESHICYFCGWLREFYGPSFLEA 160 (508)
Q Consensus 85 ~g~tpLh~A~--~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g--~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~ 160 (508)
.|.||||+|+ ..|+.+++++|+++|++++..+..|.||||+|+..| +.+++++|+++|++++ .++..|.||||
T Consensus 105 ~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din--~~d~~g~tpL~- 181 (480)
T PHA03100 105 NGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDIN--AKNRYGYTPLH- 181 (480)
T ss_pred CCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcc--cccCCCCCHHH-
Confidence 9999999999 999999999999999999999999999999999999 9999999999999999 88999999999
Q ss_pred HHhhcCCHHHHHHhhhCCCCCCCCCccc------cccccccccccC--hHHHHHHHHhhhcCCCCCCCCCcceeccCCCc
Q 010517 161 LAPQLMSRKIWVVVIPCGTANPSKPLRF------ELVIYPSLQDVQ--PRAVIALWKAKIDEPKFHQPDPSLTIYDQATK 232 (508)
Q Consensus 161 ~A~~~~~~~i~~~Ll~~g~~~~~~~~~~------~~~l~~a~~~~~--~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~ 232 (508)
+|+..|+.+++++|+++|++.+..+..+ .++++.++..+. .+.+..|+ ..|.+ ++..|..|.
T Consensus 182 ~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll--------~~g~d--in~~d~~g~ 251 (480)
T PHA03100 182 IAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLL--------SYGVP--INIKDVYGF 251 (480)
T ss_pred HHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHH--------HcCCC--CCCCCCCCC
Confidence 9999999999999999999998877666 777888877666 44444333 23677 888999999
Q ss_pred chhHhhhhcCCChhHHHHHHH
Q 010517 233 IRYKFASANEGDKHQLQWLDN 253 (508)
Q Consensus 233 t~l~~a~~~~~~~~~l~~l~~ 253 (508)
||||+|+.. +....++.|..
T Consensus 252 TpL~~A~~~-~~~~iv~~Ll~ 271 (480)
T PHA03100 252 TPLHYAVYN-NNPEFVKYLLD 271 (480)
T ss_pred CHHHHHHHc-CCHHHHHHHHH
Confidence 999999864 44666676663
No 17
>PHA03095 ankyrin-like protein; Provisional
Probab=99.97 E-value=4.4e-29 Score=262.34 Aligned_cols=230 Identities=19% Similarity=0.170 Sum_probs=203.8
Q ss_pred ccCcccccCCchHHHHHHHHcC-CHHHHHHHHHcCCCCCccCCCCChHHHHHHHh-CCCHHHHHHHHHcCCCCcccCCCC
Q 010517 7 SMNQHQQRQSKDELLYQWVIAG-DVDAIRALRSQGASLEWMDKEGKTPLIVACMD-SGLINVAKTLIELGANINAYRPGG 84 (508)
Q Consensus 7 ~~~~~~~~~~g~t~L~~Aa~~g-~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~-~g~~~~v~~Ll~~ga~~n~~~~d~ 84 (508)
+.++|.++..|.||||+|+..| +.+++++|+++|++++.+|..|.||||+|+.. .++.+++++|+++|++++.+ |.
T Consensus 73 Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~--d~ 150 (471)
T PHA03095 73 GADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNAL--DL 150 (471)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCcc--CC
Confidence 4567888899999999999999 59999999999999999999999999999932 26889999999999999998 88
Q ss_pred CCCcHHHHHHHcC--CHHHHHHHHHCCCCccccCCCCCcHHHHHHHh--CCHHHHHHHHHcCCcccccccccCCCCHHHH
Q 010517 85 RGGTPLHHAAKRG--LEPTVRLLLSCGANALVRNDDCHTALGVARIK--GHINVVRAIESHICYFCGWLREFYGPSFLEA 160 (508)
Q Consensus 85 ~g~tpLh~A~~~g--~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~--g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~ 160 (508)
.|.||||+|+..+ +.+++++|+++|++++..|..|.||||+++.. ++.+++++|++.|++++ .+|..|.||||
T Consensus 151 ~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~--~~d~~g~tpLh- 227 (471)
T PHA03095 151 YGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPA--ATDMLGNTPLH- 227 (471)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCc--ccCCCCCCHHH-
Confidence 9999999999866 68999999999999999999999999999875 78899999999999999 99999999999
Q ss_pred HHhhcCCH--HHHHHhhhCCCCCCCCCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhHhh
Q 010517 161 LAPQLMSR--KIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFA 238 (508)
Q Consensus 161 ~A~~~~~~--~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~~a 238 (508)
+|+..++. .+++.|+..|++++..+..+.+++|.|+..+....+..|+. .|+| +++.|..|+||+++|
T Consensus 228 ~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~--------~gad--~n~~~~~g~tpl~~A 297 (471)
T PHA03095 228 SMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIA--------LGAD--INAVSSDGNTPLSLM 297 (471)
T ss_pred HHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH--------cCCC--CcccCCCCCCHHHHH
Confidence 88888874 68889999999999999999999999999888766665543 3788 888999999999999
Q ss_pred hhcCCChhHHHHHH
Q 010517 239 SANEGDKHQLQWLD 252 (508)
Q Consensus 239 ~~~~~~~~~l~~l~ 252 (508)
... +....++.|.
T Consensus 298 ~~~-~~~~~v~~LL 310 (471)
T PHA03095 298 VRN-NNGRAVRAAL 310 (471)
T ss_pred HHh-CCHHHHHHHH
Confidence 754 4455555555
No 18
>PHA02946 ankyin-like protein; Provisional
Probab=99.96 E-value=6.4e-29 Score=256.61 Aligned_cols=220 Identities=15% Similarity=0.086 Sum_probs=188.5
Q ss_pred chHHHHHHHH--cCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHH
Q 010517 17 KDELLYQWVI--AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAA 94 (508)
Q Consensus 17 g~t~L~~Aa~--~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~ 94 (508)
+.++||.++. .++.++|++|+++|+++|.+|.+|.||||+|+.. |+.++|++|+++|+++|.+ |..|+||||+|+
T Consensus 37 ~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~-g~~eiv~lLL~~GAdin~~--d~~g~TpLh~A~ 113 (446)
T PHA02946 37 NYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKI-NNNRIVAMLLTHGADPNAC--DKQHKTPLYYLS 113 (446)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHc-CCHHHHHHHHHCcCCCCCC--CCCCCCHHHHHH
Confidence 4689998774 4578999999999999999999999999999998 9999999999999999998 889999999999
Q ss_pred HcC--CHHHHHHHHHCCCCccc-cCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcC--CHH
Q 010517 95 KRG--LEPTVRLLLSCGANALV-RNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLM--SRK 169 (508)
Q Consensus 95 ~~g--~~~~v~~Ll~~ga~~~~-~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~--~~~ 169 (508)
..+ ..+++++|+++|++++. .|..|.|||| |+..++.+++++|++.|++++ .+|..|+|||| +|+..+ +.+
T Consensus 114 ~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~--~~d~~G~t~Lh-~A~~~~~~~~~ 189 (446)
T PHA02946 114 GTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEAR--IVDKFGKNHIH-RHLMSDNPKAS 189 (446)
T ss_pred HcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhcccccc--ccCCCCCCHHH-HHHHhcCCCHH
Confidence 866 47899999999999995 6899999997 667799999999999999999 99999999999 776544 468
Q ss_pred HHHHhhhCCCCCCCCCccccccccccccccCh-HHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhHhhhhcCCChhHH
Q 010517 170 IWVVVIPCGTANPSKPLRFELVIYPSLQDVQP-RAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANEGDKHQL 248 (508)
Q Consensus 170 i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~-~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~~a~~~~~~~~~l 248 (508)
++++|+++|++++.++..+.+++|.++..+.. ..++.++. .+++ ++.+|..|+||||+|+........+
T Consensus 190 ~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl--------~gad--in~~d~~G~TpLh~A~~~~~~~~~~ 259 (446)
T PHA02946 190 TISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLL--------PSTD--VNKQNKFGDSPLTLLIKTLSPAHLI 259 (446)
T ss_pred HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHH--------cCCC--CCCCCCCCCCHHHHHHHhCChHHHH
Confidence 99999999999999999999999999976532 22222211 2567 8899999999999999876655556
Q ss_pred HHHHH
Q 010517 249 QWLDN 253 (508)
Q Consensus 249 ~~l~~ 253 (508)
+.|..
T Consensus 260 ~~Ll~ 264 (446)
T PHA02946 260 NKLLS 264 (446)
T ss_pred HHHHh
Confidence 65653
No 19
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.96 E-value=6.3e-29 Score=272.05 Aligned_cols=233 Identities=15% Similarity=0.130 Sum_probs=142.4
Q ss_pred ccCcccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHH---------------
Q 010517 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLI--------------- 71 (508)
Q Consensus 7 ~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll--------------- 71 (508)
+.++|.+|..|.||||+|+..|+.++|++|+++|++++..+.+|.||||+|+.. ++.+++++|+
T Consensus 168 Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~-~~~~ivk~Ll~~~~~~~~~~~~L~~ 246 (682)
T PHA02876 168 GADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDS-KNIDTIKAIIDNRSNINKNDLSLLK 246 (682)
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHc-CCHHHHHHHHhcCCCCCCCcHHHHH
Confidence 456778899999999999999999999999999999887776666666666654 5554444333
Q ss_pred --------------HcCCCCcccCCCCCCCcHHHHHHHcCCH-HHHHHHHHCCCCccccCCCCCcHHHHHHHhC-CHHHH
Q 010517 72 --------------ELGANINAYRPGGRGGTPLHHAAKRGLE-PTVRLLLSCGANALVRNDDCHTALGVARIKG-HINVV 135 (508)
Q Consensus 72 --------------~~ga~~n~~~~d~~g~tpLh~A~~~g~~-~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g-~~~~v 135 (508)
+.|++++.. |..|+||||+|+..++. +++++|++.|++++.+|..|.||||+|+..| +.+++
T Consensus 247 ai~~~~~~~~~~Ll~~g~~vn~~--d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v 324 (682)
T PHA02876 247 AIRNEDLETSLLLYDAGFSVNSI--DDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENI 324 (682)
T ss_pred HHHcCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHH
Confidence 333344444 44566666666665554 3555666666666555555666666665555 24555
Q ss_pred HHHHHcCCcccc--------------------------------cccccCCCCHHHHHHhhcCCHHHHHHhhhCCCCCCC
Q 010517 136 RAIESHICYFCG--------------------------------WLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPS 183 (508)
Q Consensus 136 ~~Ll~~ga~~~~--------------------------------~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~g~~~~~ 183 (508)
++|+..|++++. +.+|..|.|||| +|+..++.+++++|+++|++++.
T Consensus 325 ~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh-~Aa~~~~~~iv~~Ll~~gad~~~ 403 (682)
T PHA02876 325 RTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIH-YAAVRNNVVIINTLLDYGADIEA 403 (682)
T ss_pred HHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHH-HHHHcCCHHHHHHHHHCCCCccc
Confidence 555555554440 044455555555 55555555555555555555554
Q ss_pred CCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhHhhhhcCCChhHHHHHH
Q 010517 184 KPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANEGDKHQLQWLD 252 (508)
Q Consensus 184 ~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~~a~~~~~~~~~l~~l~ 252 (508)
.+..+.++++.++.......++ ..+...+.+ ++.+|..|+||||+|+........++.|.
T Consensus 404 ~~~~g~T~Lh~A~~~~~~~~~v-------k~Ll~~gad--in~~d~~G~TpLh~Aa~~~~~~~iv~lLl 463 (682)
T PHA02876 404 LSQKIGTALHFALCGTNPYMSV-------KTLIDRGAN--VNSKNKDLSTPLHYACKKNCKLDVIEMLL 463 (682)
T ss_pred cCCCCCchHHHHHHcCCHHHHH-------HHHHhCCCC--CCcCCCCCChHHHHHHHhCCcHHHHHHHH
Confidence 4444445555444333322222 223345677 78889999999999987555555566555
No 20
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.96 E-value=1.5e-28 Score=253.78 Aligned_cols=220 Identities=16% Similarity=0.070 Sum_probs=195.6
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHc
Q 010517 17 KDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKR 96 (508)
Q Consensus 17 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~ 96 (508)
.+++||.|+..|+.++|++|+++|++++.++..|.||||+|+.. |+.+++++|+++|++++.. +..+.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~ga~~~~~--~~~~~t~L~~A~~~ 78 (413)
T PHA02875 2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKF-RDSEAIKLLMKHGAIPDVK--YPDIESELHDAVEE 78 (413)
T ss_pred CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHc-CCHHHHHHHHhCCCCcccc--CCCcccHHHHHHHC
Confidence 57899999999999999999999999999999999999999998 9999999999999999987 77899999999999
Q ss_pred CCHHHHHHHHHCCCCcc-ccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHHHHHhh
Q 010517 97 GLEPTVRLLLSCGANAL-VRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVI 175 (508)
Q Consensus 97 g~~~~v~~Ll~~ga~~~-~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll 175 (508)
|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++ .++..|.|||| +|+..|+.+++++|+
T Consensus 79 g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~--~~~~~g~tpLh-~A~~~~~~~~v~~Ll 155 (413)
T PHA02875 79 GDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPD--IPNTDKFSPLH-LAVMMGDIKGIELLI 155 (413)
T ss_pred CCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC--CCCCCCCCHHH-HHHHcCCHHHHHHHH
Confidence 99999999999998764 456789999999999999999999999999999 89999999999 999999999999999
Q ss_pred hCCCCCCCCCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCc-chhHhhhhcCCChhHHHHHHH
Q 010517 176 PCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATK-IRYKFASANEGDKHQLQWLDN 253 (508)
Q Consensus 176 ~~g~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~-t~l~~a~~~~~~~~~l~~l~~ 253 (508)
++|++.+..+..+.++++.++..+..+.+..|+ ..|++ ++..+..|. |++++|.. .+....++.|..
T Consensus 156 ~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll--------~~ga~--~n~~~~~~~~t~l~~A~~-~~~~~iv~~Ll~ 223 (413)
T PHA02875 156 DHKACLDIEDCCGCTPLIIAMAKGDIAICKMLL--------DSGAN--IDYFGKNGCVAALCYAIE-NNKIDIVRLFIK 223 (413)
T ss_pred hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH--------hCCCC--CCcCCCCCCchHHHHHHH-cCCHHHHHHHHH
Confidence 999999999999999999999988865554433 34777 666677664 77887775 456667777763
No 21
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96 E-value=2.4e-28 Score=227.33 Aligned_cols=177 Identities=16% Similarity=0.131 Sum_probs=158.5
Q ss_pred cCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhC-CCHHHHHHHHHcCCCCcccCCCCCCCcHHHH
Q 010517 14 RQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS-GLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (508)
Q Consensus 14 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~-g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~ 92 (508)
.+.+.||||+|+..|+.++|+.|++. ++..|..|.||||+|+..+ ++.+++++|+++|+++|.++ +..|+||||+
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~-~~~g~TpLh~ 93 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKT-RDNNLSALHH 93 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccC-CCCCCCHHHH
Confidence 45679999999999999999999985 5678999999999999752 48999999999999999883 3589999999
Q ss_pred HHHc---CCHHHHHHHHHCCCCccccCCCCCcHHHHHHH--hCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCC
Q 010517 93 AAKR---GLEPTVRLLLSCGANALVRNDDCHTALGVARI--KGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMS 167 (508)
Q Consensus 93 A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~--~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~ 167 (508)
|+.. ++.+++++|+++|++++.+|..|.||||+|+. .++.+++++|++.|++++ .+|.+|.||||.++...++
T Consensus 94 a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin--~~d~~g~t~Lh~~a~~~~~ 171 (209)
T PHA02859 94 YLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFL--NKDFDNNNILYSYILFHSD 171 (209)
T ss_pred HHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcc--cccCCCCcHHHHHHHhcCC
Confidence 8864 47999999999999999999999999999986 468999999999999999 8999999999944677889
Q ss_pred HHHHHHhhhCCCCCCCCCccccccccccc
Q 010517 168 RKIWVVVIPCGTANPSKPLRFELVIYPSL 196 (508)
Q Consensus 168 ~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~ 196 (508)
.+++++|+++|++++.++..+.++++.+.
T Consensus 172 ~~iv~~Ll~~Gadi~~~d~~g~tpl~la~ 200 (209)
T PHA02859 172 KKIFDFLTSLGIDINETNKSGYNCYDLIK 200 (209)
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHh
Confidence 99999999999999999888888877765
No 22
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.96 E-value=3.6e-28 Score=266.11 Aligned_cols=220 Identities=20% Similarity=0.134 Sum_probs=196.1
Q ss_pred cCcccccCCchHHHHHHHHcCCH-HHHHHHHHcCCCCCccCCCCChHHHHHHHhCC-CHHHHHHHHHcCCCCcccCCCCC
Q 010517 8 MNQHQQRQSKDELLYQWVIAGDV-DAIRALRSQGASLEWMDKEGKTPLIVACMDSG-LINVAKTLIELGANINAYRPGGR 85 (508)
Q Consensus 8 ~~~~~~~~~g~t~L~~Aa~~g~~-~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g-~~~~v~~Ll~~ga~~n~~~~d~~ 85 (508)
..++.+|..|.||||+|+..|+. +++++|+++|++++.+|.+|.||||+|+.. | ..+++++|+..|++++.. |..
T Consensus 264 ~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~-g~~~~~v~~Ll~~gadin~~--d~~ 340 (682)
T PHA02876 264 FSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKN-GYDTENIRTLIMLGADVNAA--DRL 340 (682)
T ss_pred CCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHh-CCCHHHHHHHHHcCCCCCCc--ccC
Confidence 45677788999999999999997 699999999999999999999999999998 6 699999999999999998 889
Q ss_pred CCcHHHHHHHc-CCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhh
Q 010517 86 GGTPLHHAAKR-GLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (508)
Q Consensus 86 g~tpLh~A~~~-g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~ 164 (508)
|+||||+|+.. ++.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.|||| +|+.
T Consensus 341 g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~--~~~~~g~T~Lh-~A~~ 417 (682)
T PHA02876 341 YITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIE--ALSQKIGTALH-FALC 417 (682)
T ss_pred CCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc--ccCCCCCchHH-HHHH
Confidence 99999999985 57899999999999999999999999999999999999999999999999 88999999999 7765
Q ss_pred cC-CHHHHHHhhhCCCCCCCCCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhHhhhhcC
Q 010517 165 LM-SRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANE 242 (508)
Q Consensus 165 ~~-~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~~a~~~~ 242 (508)
.+ ...++++|+++|++++.++..+.++++.|+..+....+..++ ...|+| ++.+|..|.||+++|....
T Consensus 418 ~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lL-------l~~Gad--~n~~d~~g~tpl~~a~~~~ 487 (682)
T PHA02876 418 GTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEML-------LDNGAD--VNAINIQNQYPLLIALEYH 487 (682)
T ss_pred cCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHH-------HHCCCC--CCCCCCCCCCHHHHHHHhC
Confidence 54 467899999999999999999999999998766443343333 234888 8899999999999998654
No 23
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.96 E-value=3.2e-28 Score=255.60 Aligned_cols=160 Identities=22% Similarity=0.271 Sum_probs=149.4
Q ss_pred HHHHHHHcCCCCCccCCC-CChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q 010517 32 AIRALRSQGASLEWMDKE-GKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGA 110 (508)
Q Consensus 32 ~v~~Ll~~g~~~~~~d~~-G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga 110 (508)
++++|+++|++++.+|.. |.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+..|+.+++++|++.|+
T Consensus 149 iv~~Ll~~gadin~~~~~~g~tpLh~A~~~-~~~~iv~~Ll~~gad~n~~--d~~g~tpLh~A~~~~~~~iv~~Ll~~ga 225 (477)
T PHA02878 149 ITKLLLSYGADINMKDRHKGNTALHYATEN-KDQRLTELLLSYGANVNIP--DKTNNSPLHHAVKHYNKPIVHILLENGA 225 (477)
T ss_pred HHHHHHHcCCCCCccCCCCCCCHHHHHHhC-CCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHhCCHHHHHHHHHcCC
Confidence 677788889999999998 99999999998 9999999999999999998 8899999999999999999999999999
Q ss_pred CccccCCCCCcHHHHHHHh-CCHHHHHHHHHcCCccccccccc-CCCCHHHHHHhhcCCHHHHHHhhhCCCCCCCCCccc
Q 010517 111 NALVRNDDCHTALGVARIK-GHINVVRAIESHICYFCGWLREF-YGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRF 188 (508)
Q Consensus 111 ~~~~~d~~g~TpLh~A~~~-g~~~~v~~Ll~~ga~~~~~~~~~-~g~tpL~~~A~~~~~~~i~~~Ll~~g~~~~~~~~~~ 188 (508)
+++.+|..|.||||+|+.. ++.+++++|+++|++++ .++. .|.|||| +| .++.+++++|+++|++++..+..+
T Consensus 226 ~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn--~~~~~~g~TpLh-~A--~~~~~~v~~Ll~~gadin~~d~~g 300 (477)
T PHA02878 226 STDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVN--AKSYILGLTALH-SS--IKSERKLKLLLEYGADINSLNSYK 300 (477)
T ss_pred CCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCC--ccCCCCCCCHHH-HH--ccCHHHHHHHHHCCCCCCCcCCCC
Confidence 9999999999999999976 78999999999999999 6665 7999999 88 578899999999999999999999
Q ss_pred ccccccccccc
Q 010517 189 ELVIYPSLQDV 199 (508)
Q Consensus 189 ~~~l~~a~~~~ 199 (508)
.++++.++...
T Consensus 301 ~TpL~~A~~~~ 311 (477)
T PHA02878 301 LTPLSSAVKQY 311 (477)
T ss_pred CCHHHHHHHHc
Confidence 99999988644
No 24
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.96 E-value=1.8e-27 Score=250.73 Aligned_cols=228 Identities=17% Similarity=0.161 Sum_probs=172.9
Q ss_pred ccCcccccCCchHHHHHHHHc--CCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhC-----CCHHHHHHHHHcCCCCcc
Q 010517 7 SMNQHQQRQSKDELLYQWVIA--GDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS-----GLINVAKTLIELGANINA 79 (508)
Q Consensus 7 ~~~~~~~~~~g~t~L~~Aa~~--g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~-----g~~~~v~~Ll~~ga~~n~ 79 (508)
+.++|.+ ..|.|+||+++.. ++.++|++||++|+|+|.++ .+.||||.|+..+ ++.+++++|+++|+++|.
T Consensus 26 GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~ 103 (494)
T PHA02989 26 GFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINL 103 (494)
T ss_pred CCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCC
Confidence 3455666 5688988776644 37899999999999999886 5789999987641 357899999999999999
Q ss_pred cCCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCc-cccCCCCCcHHHHHHHh--CCHHHHHHHHHcCCcccccc-ccc
Q 010517 80 YRPGGRGGTPLHHAAKR---GLEPTVRLLLSCGANA-LVRNDDCHTALGVARIK--GHINVVRAIESHICYFCGWL-REF 152 (508)
Q Consensus 80 ~~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~ga~~-~~~d~~g~TpLh~A~~~--g~~~~v~~Ll~~ga~~~~~~-~~~ 152 (508)
+ |..|.||||.|+.. |+.+++++|+++|+|+ +.+|..|.||||+|+.. ++.+++++|+++|++++ . .+.
T Consensus 104 ~--d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~--~~~~~ 179 (494)
T PHA02989 104 K--TFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLF--EKTSL 179 (494)
T ss_pred C--CCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcc--ccccc
Confidence 8 88999999988765 6789999999999999 78999999999998764 68899999999999998 5 678
Q ss_pred CCCCHHHHHHhhc----CCHHHHHHhhhCCCCCCCCCcccc--------------------------------------c
Q 010517 153 YGPSFLEALAPQL----MSRKIWVVVIPCGTANPSKPLRFE--------------------------------------L 190 (508)
Q Consensus 153 ~g~tpL~~~A~~~----~~~~i~~~Ll~~g~~~~~~~~~~~--------------------------------------~ 190 (508)
.|.|||| ++... ++.+++++|+++|++++..+..++ +
T Consensus 180 ~g~tpL~-~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~T 258 (494)
T PHA02989 180 YGLTPMN-IYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFN 258 (494)
T ss_pred cCCChHH-HHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCC
Confidence 8999999 77654 488999999999998876664333 3
Q ss_pred cccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhHhhhhcCCChhHHHHHH
Q 010517 191 VIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANEGDKHQLQWLD 252 (508)
Q Consensus 191 ~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~~a~~~~~~~~~l~~l~ 252 (508)
+++.++..+..+.+ ..+...|+| ++.+|..|.|||++|... +....++.++
T Consensus 259 pL~~Aa~~~~~~~v--------~~LL~~Gad--in~~d~~G~TpL~~A~~~-~~~~iv~~LL 309 (494)
T PHA02989 259 PLLISAKVDNYEAF--------NYLLKLGDD--IYNVSKDGDTVLTYAIKH-GNIDMLNRIL 309 (494)
T ss_pred HHHHHHHhcCHHHH--------HHHHHcCCC--ccccCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 33333333332222 223344667 677777777777777654 3444455554
No 25
>PHA02798 ankyrin-like protein; Provisional
Probab=99.95 E-value=4.2e-27 Score=247.70 Aligned_cols=220 Identities=18% Similarity=0.167 Sum_probs=133.5
Q ss_pred chHHHHHHHH--cCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHh----CCCHHHHHHHHHcCCCCcccCCCCCCCcHH
Q 010517 17 KDELLYQWVI--AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMD----SGLINVAKTLIELGANINAYRPGGRGGTPL 90 (508)
Q Consensus 17 g~t~L~~Aa~--~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~----~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpL 90 (508)
|.|+++.+.. .++.++|++|+++|+|+|.+|..|.||||+|+.+ .++.+++++|+++|+++|.+ |..|+|||
T Consensus 36 ~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~--d~~G~TpL 113 (489)
T PHA02798 36 EYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKK--NSDGETPL 113 (489)
T ss_pred cchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCC--CCCcCcHH
Confidence 4455443332 2356666666666666666666666666665531 13456666666666666665 55666666
Q ss_pred HHHHHcC---CHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCC---HHHHHHHHHcCCccccccc-ccCCCCHHHHHHh
Q 010517 91 HHAAKRG---LEPTVRLLLSCGANALVRNDDCHTALGVARIKGH---INVVRAIESHICYFCGWLR-EFYGPSFLEALAP 163 (508)
Q Consensus 91 h~A~~~g---~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~---~~~v~~Ll~~ga~~~~~~~-~~~g~tpL~~~A~ 163 (508)
|+|+..+ +.+++++|+++|++++..|..|.||||+|+..++ .+++++|+++|++++ .+ +..|.|||| .+.
T Consensus 114 h~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin--~~~~~~~~t~Lh-~~~ 190 (489)
T PHA02798 114 YCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDIN--THNNKEKYDTLH-CYF 190 (489)
T ss_pred HHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcc--cccCcCCCcHHH-HHH
Confidence 6666653 4566666666666666666666666666666665 666666666666665 44 235666666 443
Q ss_pred hc----CCHHHHHHhhhCCCCC---------------------------------------CCCCccccccccccccccC
Q 010517 164 QL----MSRKIWVVVIPCGTAN---------------------------------------PSKPLRFELVIYPSLQDVQ 200 (508)
Q Consensus 164 ~~----~~~~i~~~Ll~~g~~~---------------------------------------~~~~~~~~~~l~~a~~~~~ 200 (508)
.. ++.+++++|+++|+++ +.++..+.+++|.|+..+.
T Consensus 191 ~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~ 270 (489)
T PHA02798 191 KYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNN 270 (489)
T ss_pred HhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCc
Confidence 32 3556666666665544 4444556677777776666
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhHhhhhcCCChhHHHHHH
Q 010517 201 PRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANEGDKHQLQWLD 252 (508)
Q Consensus 201 ~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~~a~~~~~~~~~l~~l~ 252 (508)
.+.+..| ...|+| ++.+|..|+|||++|... +....++.+.
T Consensus 271 ~~~v~~L--------L~~GAd--in~~d~~G~TpL~~A~~~-~~~~iv~~lL 311 (489)
T PHA02798 271 RKIFEYL--------LQLGGD--INIITELGNTCLFTAFEN-ESKFIFNSIL 311 (489)
T ss_pred HHHHHHH--------HHcCCc--ccccCCCCCcHHHHHHHc-CcHHHHHHHH
Confidence 4444433 344788 888999999999998753 3344444443
No 26
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.95 E-value=9.4e-27 Score=238.17 Aligned_cols=230 Identities=17% Similarity=0.091 Sum_probs=170.6
Q ss_pred cCcccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHH-----cCCCCcccCC
Q 010517 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIE-----LGANINAYRP 82 (508)
Q Consensus 8 ~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~-----~ga~~n~~~~ 82 (508)
.++|..|+.|.||||+|+..++.|..+.|++.|+++-..|.+|.+|+|.|++. |..|+.++.+. .+..+|..
T Consensus 145 ~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s-~s~e~mEi~l~~~g~~r~~~in~~-- 221 (929)
T KOG0510|consen 145 ADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARS-GSKECMEIFLPEHGYERQTHINFD-- 221 (929)
T ss_pred CCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHh-cchhhhhhhhccccchhhcccccc--
Confidence 45666777777777777777777766777777777777777777777777776 77777777776 55666766
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCC---------------ccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccc
Q 010517 83 GGRGGTPLHHAAKRGLEPTVRLLLSCGAN---------------ALVRNDDCHTALGVARIKGHINVVRAIESHICYFCG 147 (508)
Q Consensus 83 d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~---------------~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~ 147 (508)
+..|.||||.|+..|+.++++.+|+.|+. ++..|++|.||||+|++.|+.++++.|+..|++++
T Consensus 222 ~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~- 300 (929)
T KOG0510|consen 222 NNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASIN- 300 (929)
T ss_pred cCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCccc-
Confidence 66788888888888888888888877643 34568888888888888888888888888888888
Q ss_pred cccccCCCCHHHHHHhhcCCHHHHHHhhh-CC-CCCCCCCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCc-c
Q 010517 148 WLREFYGPSFLEALAPQLMSRKIWVVVIP-CG-TANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPS-L 224 (508)
Q Consensus 148 ~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~-~g-~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~-i 224 (508)
.++.++.|||| .|+..|+..+++.|++ .+ ...+..|..+.+++|.+++.++.+.+..|++.. ++.. .
T Consensus 301 -~kn~d~~spLH-~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~G--------A~~~~~ 370 (929)
T KOG0510|consen 301 -SKNKDEESPLH-FAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKG--------ALFLNM 370 (929)
T ss_pred -ccCCCCCCchH-HHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcC--------hhhhcc
Confidence 88888888888 8888888888888887 33 334567778888888888887766666554432 2210 1
Q ss_pred eeccCCCcchhHhhhhcCCChhHHHHHH
Q 010517 225 TIYDQATKIRYKFASANEGDKHQLQWLD 252 (508)
Q Consensus 225 ~~~d~~~~t~l~~a~~~~~~~~~l~~l~ 252 (508)
...|.+|.|+||+|+. ++..+.++.|.
T Consensus 371 ~e~D~dg~TaLH~Aa~-~g~~~av~~Li 397 (929)
T KOG0510|consen 371 SEADSDGNTALHLAAK-YGNTSAVQKLI 397 (929)
T ss_pred cccccCCchhhhHHHH-hccHHHHHHHH
Confidence 1348889999999874 45555566655
No 27
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94 E-value=1.1e-26 Score=237.70 Aligned_cols=231 Identities=19% Similarity=0.159 Sum_probs=193.2
Q ss_pred CcccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCc
Q 010517 9 NQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGT 88 (508)
Q Consensus 9 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~t 88 (508)
+.+.++.++.+|||+|+..|+.++++.|+++|+|+|..|..|.||||+||.. ++.|..++|++.|+++-.. |.+|++
T Consensus 113 d~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~-~~~E~~k~Li~~~a~~~K~--~~~~~~ 189 (929)
T KOG0510|consen 113 DTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARK-NKVEAKKELINKGADPCKS--DIDGNF 189 (929)
T ss_pred CCChhhhhccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhc-ChHHHHHHHHhcCCCCCcc--cCcCCc
Confidence 3445677788888888888888888888888888888888888888888886 8888778888888888776 788888
Q ss_pred HHHHHHHcCCHHHHHHHHH-----CCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccc-------------ccc
Q 010517 89 PLHHAAKRGLEPTVRLLLS-----CGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCG-------------WLR 150 (508)
Q Consensus 89 pLh~A~~~g~~~~v~~Ll~-----~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~-------------~~~ 150 (508)
|+|.|++.|..+++++.+. .+..+|..|..|.||||.|+..|+.++++.+|+.|..+.. +..
T Consensus 190 ~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~ 269 (929)
T KOG0510|consen 190 PIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDE 269 (929)
T ss_pred hHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcc
Confidence 8888888888888888887 5677888899999999999999999999999998865431 356
Q ss_pred ccCCCCHHHHHHhhcCCHHHHHHhhhCCCCCCCCCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCC
Q 010517 151 EFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQA 230 (508)
Q Consensus 151 ~~~g~tpL~~~A~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~ 230 (508)
|.+|.|||| +|++.|+.+.++.|+..|++++.++...++++|.|+.++.-.++..|+.. ....+++..|..
T Consensus 270 d~dg~tpLH-~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~--------~~~rllne~D~~ 340 (929)
T KOG0510|consen 270 DNDGCTPLH-YAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQE--------SDTRLLNESDLH 340 (929)
T ss_pred cccCCchHH-HHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhC--------cCcccccccccc
Confidence 889999999 99999999999999999999999999999999999999999988887762 122347778899
Q ss_pred CcchhHhhhhcCCChhHHHHHH
Q 010517 231 TKIRYKFASANEGDKHQLQWLD 252 (508)
Q Consensus 231 ~~t~l~~a~~~~~~~~~l~~l~ 252 (508)
|.||+|+|+ .++.....+-|.
T Consensus 341 g~tpLHlaa-~~gH~~v~qlLl 361 (929)
T KOG0510|consen 341 GMTPLHLAA-KSGHDRVVQLLL 361 (929)
T ss_pred CCCchhhhh-hcCHHHHHHHHH
Confidence 999999998 445555555554
No 28
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.94 E-value=2.1e-26 Score=214.26 Aligned_cols=152 Identities=14% Similarity=0.109 Sum_probs=137.8
Q ss_pred cccccCCchHHHHHHHHcC--CHHHHHHHHHcCCCCCccC-CCCChHHHHHHHh--CCCHHHHHHHHHcCCCCcccCCCC
Q 010517 10 QHQQRQSKDELLYQWVIAG--DVDAIRALRSQGASLEWMD-KEGKTPLIVACMD--SGLINVAKTLIELGANINAYRPGG 84 (508)
Q Consensus 10 ~~~~~~~g~t~L~~Aa~~g--~~~~v~~Ll~~g~~~~~~d-~~G~TpLh~Aa~~--~g~~~~v~~Ll~~ga~~n~~~~d~ 84 (508)
++..|..|.||||+|+..+ +.++|++|+++|+++|.++ ..|.||||+|+.. .++.+++++|+++|+++|.+ |.
T Consensus 44 ~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~--d~ 121 (209)
T PHA02859 44 VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEE--DE 121 (209)
T ss_pred hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCc--CC
Confidence 5677899999999999855 8999999999999999997 4899999998864 14799999999999999998 88
Q ss_pred CCCcHHHHHHH--cCCHHHHHHHHHCCCCccccCCCCCcHHHH-HHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHH
Q 010517 85 RGGTPLHHAAK--RGLEPTVRLLLSCGANALVRNDDCHTALGV-ARIKGHINVVRAIESHICYFCGWLREFYGPSFLEAL 161 (508)
Q Consensus 85 ~g~tpLh~A~~--~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~-A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~ 161 (508)
.|.||||+|+. .++.+++++|+++|++++.+|..|.||||. |+..++.+++++|+++|++++ .+|..|+|||| +
T Consensus 122 ~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~--~~d~~g~tpl~-l 198 (209)
T PHA02859 122 DGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDIN--ETNKSGYNCYD-L 198 (209)
T ss_pred CCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCC--CCCCCCCCHHH-H
Confidence 99999999986 468999999999999999999999999996 567889999999999999999 99999999999 7
Q ss_pred HhhcC
Q 010517 162 APQLM 166 (508)
Q Consensus 162 A~~~~ 166 (508)
|+..+
T Consensus 199 a~~~~ 203 (209)
T PHA02859 199 IKFRN 203 (209)
T ss_pred Hhhhh
Confidence 76653
No 29
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94 E-value=3.7e-27 Score=220.87 Aligned_cols=169 Identities=25% Similarity=0.374 Sum_probs=152.9
Q ss_pred cccccCcccccCCchHHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCChHHHHHHHh----CCCHHHHHHHHHcCCCCc
Q 010517 4 SLNSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQG-ASLEWMDKEGKTPLIVACMD----SGLINVAKTLIELGANIN 78 (508)
Q Consensus 4 ~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g-~~~~~~d~~G~TpLh~Aa~~----~g~~~~v~~Ll~~ga~~n 78 (508)
.+-.+-+|.-|.+|+|+||||+.++++++|+.||+.| +++|.+|+-|+||+|+++.. ..+.++|..|.+.| |+|
T Consensus 255 ~lL~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVN 333 (452)
T KOG0514|consen 255 PLLEYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVN 333 (452)
T ss_pred HHHHHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccc
Confidence 3344567888999999999999999999999999988 58999999999999999864 14678999999996 888
Q ss_pred ccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHc-CCcccccccccCCCCH
Q 010517 79 AYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESH-ICYFCGWLREFYGPSF 157 (508)
Q Consensus 79 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~g~tp 157 (508)
.+- ...|+|+||+|+.+|+.++|+.||..|+|+|.+|.+|.|+|+.|+.+||.||+++||.. ++|+. +.|.+|.|+
T Consensus 334 aKA-sQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~s--LtD~DgSTA 410 (452)
T KOG0514|consen 334 AKA-SQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDIS--LTDVDGSTA 410 (452)
T ss_pred hhh-hhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccce--eecCCCchh
Confidence 874 67899999999999999999999999999999999999999999999999999999876 47777 899999999
Q ss_pred HHHHHhhcCCHHHHHHhhhC
Q 010517 158 LEALAPQLMSRKIWVVVIPC 177 (508)
Q Consensus 158 L~~~A~~~~~~~i~~~Ll~~ 177 (508)
|+ +|...||.+|..+|..+
T Consensus 411 l~-IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 411 LS-IALEAGHREIAVMLYAH 429 (452)
T ss_pred hh-hHHhcCchHHHHHHHHH
Confidence 99 99999999999877654
No 30
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94 E-value=9.1e-27 Score=224.78 Aligned_cols=160 Identities=25% Similarity=0.302 Sum_probs=152.7
Q ss_pred cccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHH
Q 010517 12 QQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLH 91 (508)
Q Consensus 12 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh 91 (508)
-....|-+||..|+..||+++|+.|+++|+++|.......|||--||.. |++++|++|+++|+|+++. |.+|.|.||
T Consensus 79 ge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfD-G~leivKyLvE~gad~~Ia--nrhGhTcLm 155 (615)
T KOG0508|consen 79 GETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFD-GHLEIVKYLVEHGADPEIA--NRHGHTCLM 155 (615)
T ss_pred CcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhc-chhHHHHHHHHcCCCCccc--ccCCCeeEE
Confidence 3366789999999999999999999999999999999999999999997 9999999999999999998 899999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHHH
Q 010517 92 HAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIW 171 (508)
Q Consensus 92 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~ 171 (508)
+|+.+||.+|+++|++.|+|+|.++..|.|+||.++..|+++++++|+++|+.+. +|.+|.|||. .|+..|+.+++
T Consensus 156 Ia~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~---~d~~GmtPL~-~Aa~tG~~~iV 231 (615)
T KOG0508|consen 156 IACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKID---VDGHGMTPLL-LAAVTGHTDIV 231 (615)
T ss_pred eeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceee---ecCCCCchHH-HHhhhcchHHH
Confidence 9999999999999999999999999999999999999999999999999999886 7888999999 99999999999
Q ss_pred HHhhhCC
Q 010517 172 VVVIPCG 178 (508)
Q Consensus 172 ~~Ll~~g 178 (508)
++|+...
T Consensus 232 e~L~~~~ 238 (615)
T KOG0508|consen 232 ERLLQCE 238 (615)
T ss_pred HHHhcCC
Confidence 9999743
No 31
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94 E-value=5.7e-26 Score=227.37 Aligned_cols=168 Identities=13% Similarity=0.019 Sum_probs=151.4
Q ss_pred cccCCchHHHHHHHH--cCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCccc-CC---CCC
Q 010517 12 QQRQSKDELLYQWVI--AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAY-RP---GGR 85 (508)
Q Consensus 12 ~~~~~g~t~L~~Aa~--~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~-~~---d~~ 85 (508)
.++.+++|+||+++. .|+.++|++||++|+|++.. ++.||||+|+.. ++.+++++|+++|++.+.. +. +..
T Consensus 111 ~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~-~~~eIVk~Lls~Ga~~~n~~~~~l~~~~ 187 (437)
T PHA02795 111 KNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICK-KESSVVEFILNCGIPDENDVKLDLYKII 187 (437)
T ss_pred hccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHc-CcHHHHHHHHhcCCcccccccchhhhhh
Confidence 578889999999999 99999999999999999884 458999999997 9999999999999854322 10 134
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhc
Q 010517 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL 165 (508)
Q Consensus 86 g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~ 165 (508)
|.|++|.|+..++.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.|||| +|+..
T Consensus 188 ~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN--~~d~~G~TpLh-~Aa~~ 264 (437)
T PHA02795 188 QYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVN--AVMSNGYTCLD-VAVDR 264 (437)
T ss_pred ccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CcCCCCCCHHH-HHHHc
Confidence 7899999999999999999999999999999999999999999999999999999999999 99999999999 89888
Q ss_pred C--------CHHHHHHhhhCCCCCCCCC
Q 010517 166 M--------SRKIWVVVIPCGTANPSKP 185 (508)
Q Consensus 166 ~--------~~~i~~~Ll~~g~~~~~~~ 185 (508)
| +.+++++|+++|++++...
T Consensus 265 g~~~~~~~~~~eIvelLL~~gadI~~~~ 292 (437)
T PHA02795 265 GSVIARRETHLKILEILLREPLSIDCIK 292 (437)
T ss_pred CCcccccccHHHHHHHHHhCCCCCCchh
Confidence 7 4699999999999887544
No 32
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94 E-value=6.7e-27 Score=225.68 Aligned_cols=188 Identities=23% Similarity=0.228 Sum_probs=169.5
Q ss_pred cCCchHHHHHHHHcCCHHHHHHHHH-cCCCCCc--------cCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCC
Q 010517 14 RQSKDELLYQWVIAGDVDAIRALRS-QGASLEW--------MDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGG 84 (508)
Q Consensus 14 ~~~g~t~L~~Aa~~g~~~~v~~Ll~-~g~~~~~--------~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~ 84 (508)
+.+|.|||..||++||.++|++|++ -++++.. ...+|-+||-.|+.. ||+++|++|+++|+++|.. ..
T Consensus 39 ~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaA-GHl~vVk~L~~~ga~VN~t--T~ 115 (615)
T KOG0508|consen 39 VQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAA-GHLEVVKLLLRRGASVNDT--TR 115 (615)
T ss_pred ccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhcc-CcHHHHHHHHHhcCccccc--cc
Confidence 5678899999999999999999999 4555432 245788998888876 9999999999999999976 55
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhh
Q 010517 85 RGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (508)
Q Consensus 85 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~ 164 (508)
...|||--||.-|+.++|++|+++|+|++..|..|.|.||+|+.+||.+|+++|++.|+|+| .++..|.|+|| .|++
T Consensus 116 TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn--~ks~kGNTALH-~caE 192 (615)
T KOG0508|consen 116 TNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVN--AKSYKGNTALH-DCAE 192 (615)
T ss_pred cCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcc--hhcccCchHHH-hhhh
Confidence 66799999999999999999999999999999999999999999999999999999999999 89999999999 9999
Q ss_pred cCCHHHHHHhhhCCCCCCCCCccccccccccccccChHHHHHHH
Q 010517 165 LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALW 208 (508)
Q Consensus 165 ~~~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~ 208 (508)
.|+.+++++|+++|+.+.... .+.+++..+...+..+.+..|+
T Consensus 193 sG~vdivq~Ll~~ga~i~~d~-~GmtPL~~Aa~tG~~~iVe~L~ 235 (615)
T KOG0508|consen 193 SGSVDIVQLLLKHGAKIDVDG-HGMTPLLLAAVTGHTDIVERLL 235 (615)
T ss_pred cccHHHHHHHHhCCceeeecC-CCCchHHHHhhhcchHHHHHHh
Confidence 999999999999999886554 6899999998888887777665
No 33
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.94 E-value=8e-26 Score=238.29 Aligned_cols=199 Identities=13% Similarity=0.120 Sum_probs=153.9
Q ss_pred ccCcccccCCchHHHHHHHH------cCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhC--CCHHHHHHHHHcCCCC-
Q 010517 7 SMNQHQQRQSKDELLYQWVI------AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS--GLINVAKTLIELGANI- 77 (508)
Q Consensus 7 ~~~~~~~~~~g~t~L~~Aa~------~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~--g~~~~v~~Ll~~ga~~- 77 (508)
+.++|.++ .+.||||.|+. .|+.++|++||++|+|+|.+|..|.||||.|+..+ ++.+++++|+++|+++
T Consensus 60 GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin 138 (494)
T PHA02989 60 GADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVN 138 (494)
T ss_pred CCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcc
Confidence 34444444 46788887764 46778888888888888888888888888776531 4678888888888888
Q ss_pred cccCCCCCCCcHHHHHHHc--CCHHHHHHHHHCCCCccc-cCCCCCcHHHHHHHhC----CHHHHHHHHHcCCcccc---
Q 010517 78 NAYRPGGRGGTPLHHAAKR--GLEPTVRLLLSCGANALV-RNDDCHTALGVARIKG----HINVVRAIESHICYFCG--- 147 (508)
Q Consensus 78 n~~~~d~~g~tpLh~A~~~--g~~~~v~~Ll~~ga~~~~-~d~~g~TpLh~A~~~g----~~~~v~~Ll~~ga~~~~--- 147 (508)
+.+ |..|+||||+|+.. ++.+++++|+++|++++. .+..|.||||+|++.+ +.+++++|+++|++++.
T Consensus 139 ~~~--d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~ 216 (494)
T PHA02989 139 DVK--NSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNN 216 (494)
T ss_pred ccc--CCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCC
Confidence 666 67788888887653 577888888888888877 5677888888877654 77888888887776541
Q ss_pred ---------------------------------cccccCCCCHHHHHHhhcCCHHHHHHhhhCCCCCCCCCccccccccc
Q 010517 148 ---------------------------------WLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYP 194 (508)
Q Consensus 148 ---------------------------------~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~l~~ 194 (508)
+.+|..|+|||| +|+..++.+++++|+++|++++..+..+.++++.
T Consensus 217 ~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~-~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~ 295 (494)
T PHA02989 217 GSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLL-ISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTY 295 (494)
T ss_pred ccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHH-HHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 145677999999 9999999999999999999999999999999999
Q ss_pred cccccChHHHHHHHH
Q 010517 195 SLQDVQPRAVIALWK 209 (508)
Q Consensus 195 a~~~~~~~~v~~l~~ 209 (508)
+.+.+....+..++.
T Consensus 296 A~~~~~~~iv~~LL~ 310 (494)
T PHA02989 296 AIKHGNIDMLNRILQ 310 (494)
T ss_pred HHHcCCHHHHHHHHh
Confidence 999888766655443
No 34
>PHA02917 ankyrin-like protein; Provisional
Probab=99.93 E-value=3.1e-25 Score=237.92 Aligned_cols=234 Identities=14% Similarity=0.100 Sum_probs=183.8
Q ss_pred ccCcccccCCchHHHHHHHHc---CCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCH----HHHHHHHHcCCCCcc
Q 010517 7 SMNQHQQRQSKDELLYQWVIA---GDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLI----NVAKTLIELGANINA 79 (508)
Q Consensus 7 ~~~~~~~~~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~----~~v~~Ll~~ga~~n~ 79 (508)
....+.+|.+|+||||+|+.. |+.++|++||++|++++.+|..|.||||+|+.. |+. +++++|++.+...|.
T Consensus 22 ~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~-g~~~v~~~~~~~Ll~~~~~~n~ 100 (661)
T PHA02917 22 RDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNS-RHVKVNKDIAMALLEATGYSNI 100 (661)
T ss_pred cCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHc-CChhHHHHHHHHHHhccCCCCC
Confidence 344567799999999997555 889999999999999999999999999999997 874 466888887655555
Q ss_pred cCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHH--HhCCHHHHHHHHHcCCccccccccc---CC
Q 010517 80 YRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVAR--IKGHINVVRAIESHICYFCGWLREF---YG 154 (508)
Q Consensus 80 ~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~--~~g~~~~v~~Ll~~ga~~~~~~~~~---~g 154 (508)
. +. .+++|+|+..|+.++|++|+++|++++..|..|+||||+|+ ..|+.+++++|+++|++++ .+|. .|
T Consensus 101 ~--~~--~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn--~~d~~~~~g 174 (661)
T PHA02917 101 N--DF--NIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL--YEDEDDEYG 174 (661)
T ss_pred C--Cc--chHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc--ccccccccc
Confidence 4 32 37788899999999999999999999999999999999654 5789999999999999997 4443 34
Q ss_pred -----------CCHHHHHHhh-----------cCCHHHHHHhhhCCCCCCCCCccccccccccccccChH-HHHHHHHhh
Q 010517 155 -----------PSFLEALAPQ-----------LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPR-AVIALWKAK 211 (508)
Q Consensus 155 -----------~tpL~~~A~~-----------~~~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~-~v~~l~~~~ 211 (508)
.|||| +|+. .++.+++++|+++|++++.++..+.++++.++..++.+ .++.++..
T Consensus 175 ~~~~~~~~~~~~t~L~-~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~- 252 (661)
T PHA02917 175 YAYDDYQPRNCGTVLH-LYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK- 252 (661)
T ss_pred cccccccccccccHHH-HHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-
Confidence 59999 7764 46899999999999999999999999999999888754 34443321
Q ss_pred hcCCCCCCCCC--cceeccCCCcchhHhhhh------c--CCChhHHHHHHHhhc
Q 010517 212 IDEPKFHQPDP--SLTIYDQATKIRYKFASA------N--EGDKHQLQWLDNACR 256 (508)
Q Consensus 212 ~~~~~~~~~d~--~i~~~d~~~~t~l~~a~~------~--~~~~~~l~~l~~~~~ 256 (508)
+.+. .....|..+.++++++.- . .-+...++.|.....
T Consensus 253 -------g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga 300 (661)
T PHA02917 253 -------GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGK 300 (661)
T ss_pred -------CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCC
Confidence 3331 123456667777777761 1 125566777765553
No 35
>PHA02798 ankyrin-like protein; Provisional
Probab=99.93 E-value=1.5e-25 Score=236.00 Aligned_cols=200 Identities=15% Similarity=0.108 Sum_probs=176.7
Q ss_pred cccCcccccCCchHHHHHHHHc-----CCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhC--CCHHHHHHHHHcCCCCc
Q 010517 6 NSMNQHQQRQSKDELLYQWVIA-----GDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS--GLINVAKTLIELGANIN 78 (508)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~Aa~~-----g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~--g~~~~v~~Ll~~ga~~n 78 (508)
.+.++|.+|..|.||||+|+.+ ++.+++++|+++|+|+|.+|..|.||||+|+..+ ++.+++++|+++|++++
T Consensus 60 ~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn 139 (489)
T PHA02798 60 LGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTT 139 (489)
T ss_pred CCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCcc
Confidence 4567888899999999999864 7899999999999999999999999999999862 37899999999999999
Q ss_pred ccCCCCCCCcHHHHHHHcCC---HHHHHHHHHCCCCccccC-CCCCcHHHHHHHh----CCHHHHHHHHHcCCcccc---
Q 010517 79 AYRPGGRGGTPLHHAAKRGL---EPTVRLLLSCGANALVRN-DDCHTALGVARIK----GHINVVRAIESHICYFCG--- 147 (508)
Q Consensus 79 ~~~~d~~g~tpLh~A~~~g~---~~~v~~Ll~~ga~~~~~d-~~g~TpLh~A~~~----g~~~~v~~Ll~~ga~~~~--- 147 (508)
.+ |..|.||||+|+..++ .+++++|++.|++++..+ ..|.||||.++.. ++.+++++|+++|++++.
T Consensus 140 ~~--d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~ 217 (489)
T PHA02798 140 LL--DKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENK 217 (489)
T ss_pred cc--CCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCc
Confidence 98 8899999999999988 999999999999999885 5789999998765 478999999988875541
Q ss_pred ----------------------------------cccccCCCCHHHHHHhhcCCHHHHHHhhhCCCCCCCCCcccccccc
Q 010517 148 ----------------------------------WLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIY 193 (508)
Q Consensus 148 ----------------------------------~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~l~ 193 (508)
+.+|..|.|||| +|+..++.+++++|+++|++++..+..++++++
T Consensus 218 ~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~-~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~ 296 (489)
T PHA02798 218 SHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLY-YSVSHNNRKIFEYLLQLGGDINIITELGNTCLF 296 (489)
T ss_pred cccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHH-HHHHcCcHHHHHHHHHcCCcccccCCCCCcHHH
Confidence 146778999999 999999999999999999999999999999999
Q ss_pred ccccccChHHHHHHH
Q 010517 194 PSLQDVQPRAVIALW 208 (508)
Q Consensus 194 ~a~~~~~~~~v~~l~ 208 (508)
.++..+....+..++
T Consensus 297 ~A~~~~~~~iv~~lL 311 (489)
T PHA02798 297 TAFENESKFIFNSIL 311 (489)
T ss_pred HHHHcCcHHHHHHHH
Confidence 999888866555443
No 36
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.92 E-value=2.2e-24 Score=239.56 Aligned_cols=167 Identities=15% Similarity=0.149 Sum_probs=156.1
Q ss_pred cCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHH
Q 010517 14 RQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHA 93 (508)
Q Consensus 14 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A 93 (508)
+..+.++||.||..|+.++++.|++.|+|+|..|.+|+||||+|+.+ |+.+++++|+++|+++|.+ |..|+||||+|
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~-g~~~~v~~Ll~~gadin~~--d~~G~TpL~~A 598 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASK-GYEDCVLVLLKHACNVHIR--DANGNTALWNA 598 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-ChHHHHHHHHhcCCCCCCc--CCCCCCHHHHH
Confidence 44678999999999999999999999999999999999999999998 9999999999999999998 88999999999
Q ss_pred HHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHHHHH
Q 010517 94 AKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVV 173 (508)
Q Consensus 94 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~ 173 (508)
+..|+.+++++|++.++..+ ...|.++||.|+..|+.+++++|+++|++++ .+|.+|.|||| +|+..|+.+++++
T Consensus 599 ~~~g~~~iv~~L~~~~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin--~~d~~G~TpLh-~A~~~g~~~iv~~ 673 (823)
T PLN03192 599 ISAKHHKIFRILYHFASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVD--SEDHQGATALQ-VAMAEDHVDMVRL 673 (823)
T ss_pred HHhCCHHHHHHHHhcCcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCC--CCCCCCCCHHH-HHHHCCcHHHHHH
Confidence 99999999999999887654 3467799999999999999999999999999 99999999999 9999999999999
Q ss_pred hhhCCCCCCCCCccc
Q 010517 174 VIPCGTANPSKPLRF 188 (508)
Q Consensus 174 Ll~~g~~~~~~~~~~ 188 (508)
|+++|++++..+..+
T Consensus 674 Ll~~GAdv~~~~~~g 688 (823)
T PLN03192 674 LIMNGADVDKANTDD 688 (823)
T ss_pred HHHcCCCCCCCCCCC
Confidence 999999998776443
No 37
>PHA02795 ankyrin-like protein; Provisional
Probab=99.92 E-value=2.5e-24 Score=215.55 Aligned_cols=179 Identities=12% Similarity=-0.032 Sum_probs=161.8
Q ss_pred CcccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCC------ccCCCCChHHHHHHH--hCCCHHHHHHHHHcCCCCccc
Q 010517 9 NQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLE------WMDKEGKTPLIVACM--DSGLINVAKTLIELGANINAY 80 (508)
Q Consensus 9 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~------~~d~~G~TpLh~Aa~--~~g~~~~v~~Ll~~ga~~n~~ 80 (508)
++|.+..+| +|+..+..+++++|+++|+++| .++..++|+||+++. . |+.++|++|+++||+++..
T Consensus 74 ~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~-n~~eiV~~LI~~GADIn~~ 147 (437)
T PHA02795 74 NIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAY-VEIDIVDFMVDHGAVIYKI 147 (437)
T ss_pred chhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcC-CCHHHHHHHHHCCCCCCCC
Confidence 455555555 9999999999999999999998 788999999999998 6 8999999999999999975
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcccc------CCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCC
Q 010517 81 RPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVR------NDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYG 154 (508)
Q Consensus 81 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~------d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g 154 (508)
.+.||||+|+..++.+++++|+++|++.... +..+.|++|.|...++.+++++|+++|++++ .+|..|
T Consensus 148 ----~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN--~kD~~G 221 (437)
T PHA02795 148 ----ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDIN--QLDAGG 221 (437)
T ss_pred ----CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcC--cCCCCC
Confidence 4479999999999999999999999854222 2347899999999999999999999999999 999999
Q ss_pred CCHHHHHHhhcCCHHHHHHhhhCCCCCCCCCccccccccccccccC
Q 010517 155 PSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQ 200 (508)
Q Consensus 155 ~tpL~~~A~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~ 200 (508)
.|||| +|+..|+.+++++|+++|++++.++..+.++++.|+..+.
T Consensus 222 ~TpLh-~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 222 RTLLY-RAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGS 266 (437)
T ss_pred CCHHH-HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 99999 9999999999999999999999999999999999988774
No 38
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.91 E-value=5.9e-25 Score=192.67 Aligned_cols=150 Identities=25% Similarity=0.203 Sum_probs=74.4
Q ss_pred ccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHH
Q 010517 11 HQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPL 90 (508)
Q Consensus 11 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpL 90 (508)
|..+-.+.+|+++++...+++.+..+.+. .+|..|+.|.|||+||+.+ |++++|++||+.|++++.. .+...++|
T Consensus 123 nevs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~-G~i~vV~fLL~~GAdp~~l--gk~resAL 197 (296)
T KOG0502|consen 123 NEVSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAK-GHIPVVQFLLNSGADPDAL--GKYRESAL 197 (296)
T ss_pred CccccccCChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHhc-CchHHHHHHHHcCCChhhh--hhhhhhhH
Confidence 33444445555555544444444433332 3344455555555555554 5555555555555555544 44444555
Q ss_pred HHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCH
Q 010517 91 HHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSR 168 (508)
Q Consensus 91 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~ 168 (508)
++|...|..++|++||.++.|+|..|.+|.|||-||++-||.+|++.|+..|++++ ..+..|.+++. +|...|+.
T Consensus 198 sLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t--~e~dsGy~~md-lAValGyr 272 (296)
T KOG0502|consen 198 SLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVT--QEDDSGYWIMD-LAVALGYR 272 (296)
T ss_pred hHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcc--cccccCCcHHH-HHHHhhhH
Confidence 55555555555555555555555555555555555555555555555555555554 44455555555 45444444
No 39
>PHA02730 ankyrin-like protein; Provisional
Probab=99.91 E-value=1.2e-23 Score=220.41 Aligned_cols=197 Identities=16% Similarity=0.069 Sum_probs=161.9
Q ss_pred Ccc-cccCCchHHHHHHHHcC---CHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCC--CHHHHHHHHHcCCCC--ccc
Q 010517 9 NQH-QQRQSKDELLYQWVIAG---DVDAIRALRSQGASLEWMDKEGKTPLIVACMDSG--LINVAKTLIELGANI--NAY 80 (508)
Q Consensus 9 ~~~-~~~~~g~t~L~~Aa~~g---~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g--~~~~v~~Ll~~ga~~--n~~ 80 (508)
++| .+|..|+||||+|+..| +.++|++||++|+|++.+|..|.||||+|+.. + +.|+|++|++.|++. +..
T Consensus 32 ~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~-~~~~~eIv~~Ll~~~~~~~~~~~ 110 (672)
T PHA02730 32 NLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKR-KYVKSQIVHLLISSYSNASNELT 110 (672)
T ss_pred chhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHc-CCCcHHHHHHHHhcCCCCCcccc
Confidence 445 77899999999999997 59999999999999999999999999999986 5 799999999997655 655
Q ss_pred CCCCCCCcHHHHHHH--cCCHHHHHHHHH-CCCCccccCC-----CCCcHHHHHHHhCCHHHHHHHHHcCCccccc----
Q 010517 81 RPGGRGGTPLHHAAK--RGLEPTVRLLLS-CGANALVRND-----DCHTALGVARIKGHINVVRAIESHICYFCGW---- 148 (508)
Q Consensus 81 ~~d~~g~tpLh~A~~--~g~~~~v~~Ll~-~ga~~~~~d~-----~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~---- 148 (508)
+..+.+|||.++. .++.++|++|++ .+++++...+ .|.+|++++...++.++|++|+++|+++++.
T Consensus 111 --~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~ 188 (672)
T PHA02730 111 --SNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRS 188 (672)
T ss_pred --cccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCccccccccc
Confidence 7778999999998 899999999997 6688776633 7899999999999999999999999999632
Q ss_pred -ccccCCCCHHHHHH------hhcCCHHHHHHhhhCCCCCCCCCccccccccc--cccccChHHHHHHH
Q 010517 149 -LREFYGPSFLEALA------PQLMSRKIWVVVIPCGTANPSKPLRFELVIYP--SLQDVQPRAVIALW 208 (508)
Q Consensus 149 -~~~~~g~tpL~~~A------~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~l~~--a~~~~~~~~v~~l~ 208 (508)
..+..+.+|+-++. ...++.+++++|+++|++++.++..+++++|. +...++.+.+..|+
T Consensus 189 ~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li 257 (672)
T PHA02730 189 CMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLI 257 (672)
T ss_pred ccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHH
Confidence 24444544443222 46778999999999999999999999999984 33444443333333
No 40
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.91 E-value=8.7e-24 Score=189.37 Aligned_cols=145 Identities=19% Similarity=0.185 Sum_probs=124.8
Q ss_pred cccCcccccCCchHHHHHHHHcCCH----HHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHH---HHHHHHHcCCCCc
Q 010517 6 NSMNQHQQRQSKDELLYQWVIAGDV----DAIRALRSQGASLEWMDKEGKTPLIVACMDSGLIN---VAKTLIELGANIN 78 (508)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~Aa~~g~~----~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~---~v~~Ll~~ga~~n 78 (508)
+.++++..+.++.++||+|++.|++ +++++|++.|++++.+|..|+||||+|+.. |+.+ ++++|+++|+++|
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~-g~~~~~~~i~~Ll~~Gadin 87 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWY-DRANAVMKIELLVNMGADIN 87 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHh-CccCHHHHHHHHHHcCCCCC
Confidence 4566677788888999999999998 566677888999999999999999999987 7654 4889999999999
Q ss_pred ccCCC-CCCCcHHHHHHHcCCHHHHHHHHH-CCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCC
Q 010517 79 AYRPG-GRGGTPLHHAAKRGLEPTVRLLLS-CGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGP 155 (508)
Q Consensus 79 ~~~~d-~~g~tpLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~ 155 (508)
.+ | ..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++++ .++..|.
T Consensus 88 ~~--d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~--~~~~~~~ 162 (166)
T PHA02743 88 AR--ELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCD--DPLSIGL 162 (166)
T ss_pred CC--CCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC--CcccCCc
Confidence 87 5 589999999999999999999995 799999999999999999999999999999999999988 5665553
No 41
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.91 E-value=3.2e-24 Score=232.80 Aligned_cols=228 Identities=23% Similarity=0.199 Sum_probs=184.3
Q ss_pred cCcccccCCchHHHHHHHHcC-CHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCC
Q 010517 8 MNQHQQRQSKDELLYQWVIAG-DVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (508)
Q Consensus 8 ~~~~~~~~~g~t~L~~Aa~~g-~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g 86 (508)
...+..++.|.|++|+|+..| ..++...+++.|+++|..-..|.||||+|+.. |+.+++++|++.++..+.. ...|
T Consensus 431 A~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~-Gh~~~~~llle~~~~~~~~--~~~~ 507 (1143)
T KOG4177|consen 431 ASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQE-GHTEVVQLLLEGGANDNLD--AKKG 507 (1143)
T ss_pred CChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhcc-CCchHHHHhhhcCCccCcc--chhc
Confidence 455667777888888888888 77777777888888888888888888888876 8888888888887766665 5677
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcC
Q 010517 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLM 166 (508)
Q Consensus 87 ~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~ 166 (508)
.|+||+|...++..+++.++++|++++.++..|+||||.|+.+|++.+|++|+++|++++ .+++.|+|||| .|+..|
T Consensus 508 l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~--ak~~~G~TPLH-~Aa~~G 584 (1143)
T KOG4177|consen 508 LTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVN--AKDKLGYTPLH-QAAQQG 584 (1143)
T ss_pred cchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCcccc--ccCCCCCChhh-HHHHcC
Confidence 888888888888888888888899999999999999999999999999999999999999 89999999999 999999
Q ss_pred CHHHHHHhhhCCCCCCCCCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhHhhhhcCCChh
Q 010517 167 SRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANEGDKH 246 (508)
Q Consensus 167 ~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~~a~~~~~~~~ 246 (508)
+.+|+++|+++|++++..+..+.++++.+...++...+..+... ...+ .-.+ ....+..|.+|..+..+...+.+
T Consensus 585 ~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~-~~~~--~~~~--~~~e~~~g~~p~~v~e~~~~~~~ 659 (1143)
T KOG4177|consen 585 HNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVV-TATP--AATD--PVKENRKGAVPEDVAEELDTDRQ 659 (1143)
T ss_pred hHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhc-cCcc--cccc--chhhhhcccChhhHHHHhhhhhh
Confidence 99999999999999999999999999999988886555443322 2221 1122 34456677888887775554444
No 42
>PHA02917 ankyrin-like protein; Provisional
Probab=99.90 E-value=3.6e-23 Score=222.03 Aligned_cols=208 Identities=12% Similarity=0.055 Sum_probs=165.3
Q ss_pred HHHHHHHHHcCCCCCccCCCCChHHHHHHHh--CCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHH----HHH
Q 010517 30 VDAIRALRSQGASLEWMDKEGKTPLIVACMD--SGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEP----TVR 103 (508)
Q Consensus 30 ~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~--~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~----~v~ 103 (508)
++.|+.||.+|..++.+|.+|+||||+|+.. .|+.++|++|++.|++++.+ +..|+||||+|+..|+.+ +++
T Consensus 12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~--~~~g~TpL~~Aa~~g~~~v~~~~~~ 89 (661)
T PHA02917 12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHK--NWRQLTPLEEYTNSRHVKVNKDIAM 89 (661)
T ss_pred HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCcccc--CCCCCCHHHHHHHcCChhHHHHHHH
Confidence 5788999999999999999999999997543 26799999999999999987 889999999999999854 567
Q ss_pred HHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHH-HhhcCCHHHHHHhhhCCCCCC
Q 010517 104 LLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEAL-APQLMSRKIWVVVIPCGTANP 182 (508)
Q Consensus 104 ~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~-A~~~~~~~i~~~Ll~~g~~~~ 182 (508)
+|++.+...+..+. .+++|+|+..++.++|++|+++|++++ .+|.+|+||||.+ ++..++.+++++|+++|++++
T Consensus 90 ~Ll~~~~~~n~~~~--~~~~~~a~~~~~~e~vk~Ll~~Gadin--~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn 165 (661)
T PHA02917 90 ALLEATGYSNINDF--NIFSYMKSKNVDVDLIKVLVEHGFDLS--VKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL 165 (661)
T ss_pred HHHhccCCCCCCCc--chHHHHHhhcCCHHHHHHHHHcCCCCC--ccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc
Confidence 88887544444432 367888999999999999999999999 9999999999932 346789999999999999987
Q ss_pred CCCcc--------------ccccccccccc-----------cChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhHh
Q 010517 183 SKPLR--------------FELVIYPSLQD-----------VQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKF 237 (508)
Q Consensus 183 ~~~~~--------------~~~~l~~a~~~-----------~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~~ 237 (508)
..+.. ..++++.++.. .+. ..++.++.+|+| ++.+|..|.||||+
T Consensus 166 ~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~--------eiv~~Li~~Gad--vn~~d~~G~TpLh~ 235 (661)
T PHA02917 166 YEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRP--------EVVKCLINHGIK--PSSIDKNYCTALQY 235 (661)
T ss_pred ccccccccccccccccccccccHHHHHHhhcccccccccccCcH--------HHHHHHHHCCCC--cccCCCCCCcHHHH
Confidence 54421 14677766431 121 233344556888 99999999999999
Q ss_pred hhhcCCC-hhHHHHHHH
Q 010517 238 ASANEGD-KHQLQWLDN 253 (508)
Q Consensus 238 a~~~~~~-~~~l~~l~~ 253 (508)
|+..... ...++.|..
T Consensus 236 A~~~g~~~~eivk~Li~ 252 (661)
T PHA02917 236 YIKSSHIDIDIVKLLMK 252 (661)
T ss_pred HHHcCCCcHHHHHHHHh
Confidence 9976654 356666654
No 43
>PHA02730 ankyrin-like protein; Provisional
Probab=99.90 E-value=5.1e-23 Score=215.67 Aligned_cols=221 Identities=16% Similarity=0.103 Sum_probs=174.6
Q ss_pred CchHHHHHH------HHcCCHHHHHHHHHcCCCCCccCCCCChHHHH--HHHhCCCHHHHHHHHH---------------
Q 010517 16 SKDELLYQW------VIAGDVDAIRALRSQGASLEWMDKEGKTPLIV--ACMDSGLINVAKTLIE--------------- 72 (508)
Q Consensus 16 ~g~t~L~~A------a~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~--Aa~~~g~~~~v~~Ll~--------------- 72 (508)
...|.||++ ...+..+++++||++|+|+|.+|..|.||||+ ++.. |+.|+|++|++
T Consensus 195 ~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~-~~~eiv~~Li~~~~~~~~~~~~~~~~ 273 (672)
T PHA02730 195 RCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCST-IDIEIVKLLIKDVDTCSVYDDISQPY 273 (672)
T ss_pred ccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCc-ccHHHHHHHHhccccccccccccchh
Confidence 344556644 35678999999999999999999999999995 4444 77999999999
Q ss_pred -----------------cCCCCcc--------------------cCCCCCCCc---------------------HHHHHH
Q 010517 73 -----------------LGANINA--------------------YRPGGRGGT---------------------PLHHAA 94 (508)
Q Consensus 73 -----------------~ga~~n~--------------------~~~d~~g~t---------------------pLh~A~ 94 (508)
+|+|+.+ . +..|.+ -||.-.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~ 351 (672)
T PHA02730 274 IRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSY--DSREYNHYIIDNILKRFRQQDESIVQAMLINYL 351 (672)
T ss_pred hhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccc--cccccchhHHHHHHHhhhccchhHHHHHHHHHH
Confidence 7888866 3 556654 677666
Q ss_pred HcC---CHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCC----HHHHHHHHHcCC--cccccccccCCCCHHHH--HHh
Q 010517 95 KRG---LEPTVRLLLSCGANALVRNDDCHTALGVARIKGH----INVVRAIESHIC--YFCGWLREFYGPSFLEA--LAP 163 (508)
Q Consensus 95 ~~g---~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~----~~~v~~Ll~~ga--~~~~~~~~~~g~tpL~~--~A~ 163 (508)
..+ +.+++++|+++||+++.. ..|.||||+|+..++ .+++++|+++|+ +++ .+|.+|.||||. ++.
T Consensus 352 ~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN--~kd~~G~T~Lh~~i~a~ 428 (672)
T PHA02730 352 HYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAIN--HVSNNGRLCMYGLILSR 428 (672)
T ss_pred hcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCcccc--ccccCCCchHhHHHHHH
Confidence 655 689999999999999985 799999999998875 899999999998 477 889999999982 232
Q ss_pred hcC---------CHHHHHHhhhCCCCCCCCCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccC-CCcc
Q 010517 164 QLM---------SRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQ-ATKI 233 (508)
Q Consensus 164 ~~~---------~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~-~~~t 233 (508)
..+ ..+++++|+.+|++++.++..+.++++.++.......+. .++.+|++ ++.+|. .|.|
T Consensus 429 ~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive--------~LI~~GAd--IN~~d~~~g~T 498 (672)
T PHA02730 429 FNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFAR--------RLLEYGAS--VNTTSRSIINT 498 (672)
T ss_pred hccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHH--------HHHHCCCC--CCCCCCcCCcC
Confidence 222 235799999999999999999999999998877644333 33455888 888887 5899
Q ss_pred hhHhhhhc-CCChhHHHHHH
Q 010517 234 RYKFASAN-EGDKHQLQWLD 252 (508)
Q Consensus 234 ~l~~a~~~-~~~~~~l~~l~ 252 (508)
++++++.. .+....++.|.
T Consensus 499 aL~~Aa~~~~~~~eIv~~LL 518 (672)
T PHA02730 499 AIQKSSYRRENKTKLVDLLL 518 (672)
T ss_pred HHHHHHHhhcCcHHHHHHHH
Confidence 99999864 34455555554
No 44
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.90 E-value=1.3e-23 Score=213.75 Aligned_cols=221 Identities=22% Similarity=0.172 Sum_probs=194.4
Q ss_pred ccccCcccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCC
Q 010517 5 LNSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGG 84 (508)
Q Consensus 5 ~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~ 84 (508)
..+-++|.+|.+|.|+||.|+.+|+.+++++|+++.+-++..|..|.+|||+|++. |+.+++++|+.++..+|.. ..
T Consensus 37 trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~-g~~e~vkmll~q~d~~na~--~~ 113 (854)
T KOG0507|consen 37 TRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWN-GNLEIVKMLLLQTDILNAV--NI 113 (854)
T ss_pred CCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhc-CcchHHHHHHhcccCCCcc--cc
Confidence 34567889999999999999999999999999999998899999999999999998 9999999999999999998 88
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCccc------ccccccCCCCHH
Q 010517 85 RGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC------GWLREFYGPSFL 158 (508)
Q Consensus 85 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~------~~~~~~~g~tpL 158 (508)
.|.||||.|+.+||.+++.+|+.+|+|...+|+.+.|+|.+|++.|..++|++|++...... ...++..+.+||
T Consensus 114 e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~pl 193 (854)
T KOG0507|consen 114 ENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPL 193 (854)
T ss_pred cCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCc
Confidence 99999999999999999999999999999999999999999999999999999998732211 125677899999
Q ss_pred HHHHhhcCCHHHHHHhhhCCCCCCCCCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhHhh
Q 010517 159 EALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFA 238 (508)
Q Consensus 159 ~~~A~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~~a 238 (508)
| +|+.+||.++++.|++.|.+++... ...+++|.++--+....+.-+++.. .+ ..++|..|+|.|++.
T Consensus 194 H-laakngh~~~~~~ll~ag~din~~t-~~gtalheaalcgk~evvr~ll~~g--------in--~h~~n~~~qtaldil 261 (854)
T KOG0507|consen 194 H-LAAKNGHVECMQALLEAGFDINYTT-EDGTALHEAALCGKAEVVRFLLEIG--------IN--THIKNQHGQTALDII 261 (854)
T ss_pred c-hhhhcchHHHHHHHHhcCCCccccc-ccchhhhhHhhcCcchhhhHHHhhc--------cc--cccccccchHHHHHH
Confidence 9 9999999999999999999998877 4568888888777766666555553 34 566788889999877
Q ss_pred hh
Q 010517 239 SA 240 (508)
Q Consensus 239 ~~ 240 (508)
..
T Consensus 262 ~d 263 (854)
T KOG0507|consen 262 ID 263 (854)
T ss_pred Hh
Confidence 64
No 45
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.90 E-value=4e-24 Score=232.10 Aligned_cols=219 Identities=24% Similarity=0.219 Sum_probs=189.0
Q ss_pred ccCcccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCC-CHHHHHHHHHcCCCCcccCCCCC
Q 010517 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSG-LINVAKTLIELGANINAYRPGGR 85 (508)
Q Consensus 7 ~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g-~~~~v~~Ll~~ga~~n~~~~d~~ 85 (508)
....+.+.+.|.||||.|+..++..+|+.++++|++++..+..|+||+|+|+.. | ..+++..++++|+++|.. ...
T Consensus 397 ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~-g~~~~~~~~l~~~g~~~n~~--s~~ 473 (1143)
T KOG4177|consen 397 GADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKK-GRYLQIARLLLQYGADPNAV--SKQ 473 (1143)
T ss_pred cCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhc-ccHhhhhhhHhhcCCCcchh--ccc
Confidence 344677788888888888888888888888888888888888888888888887 6 778888888888888887 678
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhc
Q 010517 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL 165 (508)
Q Consensus 86 g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~ 165 (508)
|.||||+|+..|+.+++.+|++.++..+.....|.|+||+|...++..+++.+++.|++++ .++..|.|||| .|+..
T Consensus 474 G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~--~~~~r~~TpLh-~A~~~ 550 (1143)
T KOG4177|consen 474 GFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVD--LRTGRGYTPLH-VAVHY 550 (1143)
T ss_pred cCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCcee--hhcccccchHH-HHHhc
Confidence 8888888888888888888888888888888888888888888888888888888999998 89999999999 99999
Q ss_pred CCHHHHHHhhhCCCCCCCCCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhHhhhhc
Q 010517 166 MSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASAN 241 (508)
Q Consensus 166 ~~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~~a~~~ 241 (508)
|+.++|++|+++|++.+.++..+.+++|.+++.++...+..|++ +|++ ++..|.+|.|||++|...
T Consensus 551 g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk--------~GA~--vna~d~~g~TpL~iA~~l 616 (1143)
T KOG4177|consen 551 GNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLK--------HGAS--VNAADLDGFTPLHIAVRL 616 (1143)
T ss_pred CCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHH--------cCCC--CCcccccCcchhHHHHHh
Confidence 99999999999999999999999999999999997655555444 3778 889999999999998843
No 46
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.90 E-value=1e-24 Score=191.20 Aligned_cols=183 Identities=19% Similarity=0.142 Sum_probs=166.9
Q ss_pred ccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHH
Q 010517 11 HQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPL 90 (508)
Q Consensus 11 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpL 90 (508)
...+.+|..+++.++-.|+...+..+|..|+..|..+-.+.+|+++++.. .+.+++.+|.+.. +|.. |..|.|||
T Consensus 90 ~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhq-l~L~~~~~~~~n~--VN~~--De~GfTpL 164 (296)
T KOG0502|consen 90 DETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQ-LHLDVVDLLVNNK--VNAC--DEFGFTPL 164 (296)
T ss_pred CCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHH-HHHHHHHHHhhcc--ccCc--cccCchHh
Confidence 34567799999999999999999999999999999999999999999987 8888887777764 5655 89999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHH
Q 010517 91 HHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKI 170 (508)
Q Consensus 91 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i 170 (508)
++|+.+|+..+|++||+.|+|++...+...|+|++|++.|+.+||++||.++.|+| ..|.+|-|||- +|++.+|.+|
T Consensus 165 iWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVN--vyDwNGgTpLl-yAvrgnhvkc 241 (296)
T KOG0502|consen 165 IWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVN--VYDWNGGTPLL-YAVRGNHVKC 241 (296)
T ss_pred HHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcc--eeccCCCceee-eeecCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999 9999999999
Q ss_pred HHHhhhCCCCCCCCCccccccccccccccCh
Q 010517 171 WVVVIPCGTANPSKPLRFELVIYPSLQDVQP 201 (508)
Q Consensus 171 ~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~ 201 (508)
++.|+..|++....+..+...+-.+..-+..
T Consensus 242 ve~Ll~sGAd~t~e~dsGy~~mdlAValGyr 272 (296)
T KOG0502|consen 242 VESLLNSGADVTQEDDSGYWIMDLAVALGYR 272 (296)
T ss_pred HHHHHhcCCCcccccccCCcHHHHHHHhhhH
Confidence 9999999999998887777776666655543
No 47
>PHA02741 hypothetical protein; Provisional
Probab=99.89 E-value=6.6e-23 Score=184.50 Aligned_cols=131 Identities=22% Similarity=0.273 Sum_probs=89.1
Q ss_pred ccccCCchHHHHHHHHcCCHHHHHHHHH------cCCCCCccCCCCChHHHHHHHhCCC----HHHHHHHHHcCCCCccc
Q 010517 11 HQQRQSKDELLYQWVIAGDVDAIRALRS------QGASLEWMDKEGKTPLIVACMDSGL----INVAKTLIELGANINAY 80 (508)
Q Consensus 11 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~------~g~~~~~~d~~G~TpLh~Aa~~~g~----~~~v~~Ll~~ga~~n~~ 80 (508)
+.+|..|.|+||+|+..|+.++|+.|+. .|++++.+|..|.||||+|+.. |+ .+++++|+++|+++|.+
T Consensus 15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~-g~~~~~~~ii~~Ll~~gadin~~ 93 (169)
T PHA02741 15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEK-HEAQLAAEIIDHLIELGADINAQ 93 (169)
T ss_pred hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHc-CChHHHHHHHHHHHHcCCCCCCC
Confidence 4456667777777777777777776643 2466667777777777777765 65 46667777777777766
Q ss_pred CCC-CCCCcHHHHHHHcCCHHHHHHHHH-CCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCc
Q 010517 81 RPG-GRGGTPLHHAAKRGLEPTVRLLLS-CGANALVRNDDCHTALGVARIKGHINVVRAIESHICY 144 (508)
Q Consensus 81 ~~d-~~g~tpLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~ 144 (508)
+ ..|+||||+|+..++.+++++|++ .|++++..|.+|.||||+|+..++.+++++|++.++.
T Consensus 94 --~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~ 157 (169)
T PHA02741 94 --EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT 157 (169)
T ss_pred --CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4 367777777777777777777775 4677777777777777777777777777777666543
No 48
>PHA02792 ankyrin-like protein; Provisional
Probab=99.89 E-value=6.3e-23 Score=212.73 Aligned_cols=217 Identities=14% Similarity=0.024 Sum_probs=168.1
Q ss_pred cccCcccccCCchHHHHHHHH-cCCHHHHHHHHHcCCCC------------------------------------CccCC
Q 010517 6 NSMNQHQQRQSKDELLYQWVI-AGDVDAIRALRSQGASL------------------------------------EWMDK 48 (508)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~Aa~-~g~~~~v~~Ll~~g~~~------------------------------------~~~d~ 48 (508)
+++++|.++..|.++||+|+. .++.++|++||++|+|+ |..|.
T Consensus 94 ~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 173 (631)
T PHA02792 94 KGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDR 173 (631)
T ss_pred cCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCC
Confidence 356777778888888899865 68999999999988763 23456
Q ss_pred CCChHHHHHHHhCC-------CHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcC--CHHHHHHHHH------------
Q 010517 49 EGKTPLIVACMDSG-------LINVAKTLIELGANINAYRPGGRGGTPLHHAAKRG--LEPTVRLLLS------------ 107 (508)
Q Consensus 49 ~G~TpLh~Aa~~~g-------~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g--~~~~v~~Ll~------------ 107 (508)
.|.||||+|+.. + +.|++++|+.+|++++.+ |..|.||||+|+.+. ..+++++|++
T Consensus 174 ~g~t~L~~~i~~-~s~~~~~~~~~v~k~Li~~g~~~~~~--d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l 250 (631)
T PHA02792 174 MGKTVLYYYIIT-RSQDGYATSLDVINYLISHEKEMRYY--TYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNIL 250 (631)
T ss_pred CCCchHHHHHhh-CCcccccCCHHHHHHHHhCCCCcCcc--CCCCChHHHHHHHcccchHHHHHHHHhccccccchHhHH
Confidence 688999999886 6 689999999999999887 778999999988766 4555555553
Q ss_pred -------------------------------------------------------------------------------C
Q 010517 108 -------------------------------------------------------------------------------C 108 (508)
Q Consensus 108 -------------------------------------------------------------------------------~ 108 (508)
+
T Consensus 251 ~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~ 330 (631)
T PHA02792 251 SNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDE 330 (631)
T ss_pred HHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHC
Confidence 2
Q ss_pred CCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCC--CCHHHHHHhhcCCH---HHHHHhhhCCCCCCC
Q 010517 109 GANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYG--PSFLEALAPQLMSR---KIWVVVIPCGTANPS 183 (508)
Q Consensus 109 ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g--~tpL~~~A~~~~~~---~i~~~Ll~~g~~~~~ 183 (508)
|+++. .......++.|+..|+.+++++|+++|++++ .+|.+| .|||| +|...... +++++|+++|++++.
T Consensus 331 Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN--~kD~~g~~~TpLh-~A~~n~~~~v~~IlklLIs~GADIN~ 405 (631)
T PHA02792 331 GATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVV--EDDDNIINIMPLF-PTLSIHESDVLSILKLCKPYIDDINK 405 (631)
T ss_pred CCccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchh--hhcCCCCChhHHH-HHHHhccHhHHHHHHHHHhcCCcccc
Confidence 22211 1124557888889999999999999999998 777775 69999 77666554 467889999999999
Q ss_pred CCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhHhhhh
Q 010517 184 KPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (508)
Q Consensus 184 ~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~~a~~ 240 (508)
++..+.++++.++..+..+.+..| ..+|++ ++.+|..|+|++++|..
T Consensus 406 kD~~G~TPLh~Aa~~~n~eivelL--------Ls~GAD--IN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 406 IDKHGRSILYYCIESHSVSLVEWL--------IDNGAD--INITTKYGSTCIGICVI 452 (631)
T ss_pred ccccCcchHHHHHHcCCHHHHHHH--------HHCCCC--CCCcCCCCCCHHHHHHH
Confidence 999999999999987775444332 344788 88999999999999874
No 49
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.89 E-value=1.1e-22 Score=182.23 Aligned_cols=143 Identities=15% Similarity=0.170 Sum_probs=129.8
Q ss_pred cCCCCCccCCCCChHHHHHHHhCCCH----HHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHH---HHHHHHCCCC
Q 010517 39 QGASLEWMDKEGKTPLIVACMDSGLI----NVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPT---VRLLLSCGAN 111 (508)
Q Consensus 39 ~g~~~~~~d~~G~TpLh~Aa~~~g~~----~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~---v~~Ll~~ga~ 111 (508)
+|++++..+.++.++||+||+. |+. +++++|++.|++++.+ |..|+||||+|+..|+.+. +++|+++|++
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~-g~~~~l~~~~~~l~~~g~~~~~~--d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad 85 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRT-GNIYELMEVAPFISGDGHLLHRY--DHHGRQCTHMVAWYDRANAVMKIELLVNMGAD 85 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHc-CCHHHHHHHHHHHhhcchhhhcc--CCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC
Confidence 5678888899999999999998 877 6777888999999988 8899999999999988654 8999999999
Q ss_pred ccccC-CCCCcHHHHHHHhCCHHHHHHHHH-cCCcccccccccCCCCHHHHHHhhcCCHHHHHHhhhCCCCCCCCCcc
Q 010517 112 ALVRN-DDCHTALGVARIKGHINVVRAIES-HICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLR 187 (508)
Q Consensus 112 ~~~~d-~~g~TpLh~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~g~~~~~~~~~ 187 (508)
++.+| ..|.||||+|+..++.+++++|++ .|++++ .+|..|.|||| +|+..++.+++++|+.+|++++.++..
T Consensus 86 in~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~--~~d~~g~tpL~-~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 160 (166)
T PHA02743 86 INARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLG--AINYQHETAYH-IAYKMRDRRMMEILRANGAVCDDPLSI 160 (166)
T ss_pred CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCcc--CcCCCCCCHHH-HHHHcCCHHHHHHHHHcCCCCCCcccC
Confidence 99998 589999999999999999999995 899999 89999999999 999999999999999999999877643
No 50
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.89 E-value=3e-22 Score=193.34 Aligned_cols=156 Identities=22% Similarity=0.180 Sum_probs=135.9
Q ss_pred ccccCCchH-HHHHHHHcCCHHHHHHHHHcCCCCCccC----CCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCC
Q 010517 11 HQQRQSKDE-LLYQWVIAGDVDAIRALRSQGASLEWMD----KEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (508)
Q Consensus 11 ~~~~~~g~t-~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d----~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~ 85 (508)
..+|+.|.| +||.|++.|+.+++++||++|+|+|.++ ..|.||||+|+.. ++.+++++|+++|+++|.++ +..
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~-~~~eivklLL~~GADVN~~~-~~~ 103 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDC-DNDDAAKLLIRYGADVNRYA-EEA 103 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCcCccc-CCC
Confidence 456777765 5666677799999999999999999874 5899999999997 99999999999999999863 467
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhc
Q 010517 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL 165 (508)
Q Consensus 86 g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~ 165 (508)
|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++.++... ..+..+.+|++ ++
T Consensus 104 g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~-------~~~~~~~~~~~-~~--- 172 (300)
T PHA02884 104 KITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDN-------EISNFYKHPKK-IL--- 172 (300)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCC-------cccccccChhh-hh---
Confidence 99999999999999999999999999999999999999999999999988666532 24567789998 43
Q ss_pred CCHHHHHHhhhCCC
Q 010517 166 MSRKIWVVVIPCGT 179 (508)
Q Consensus 166 ~~~~i~~~Ll~~g~ 179 (508)
++.+++++|++++.
T Consensus 173 ~n~ei~~~Lish~v 186 (300)
T PHA02884 173 INFDILKILVSHFI 186 (300)
T ss_pred ccHHHHHHHHHHHH
Confidence 47899999999987
No 51
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.89 E-value=2.1e-22 Score=223.89 Aligned_cols=150 Identities=21% Similarity=0.135 Sum_probs=140.1
Q ss_pred ccCcccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCC
Q 010517 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (508)
Q Consensus 7 ~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g 86 (508)
+.+.|.+|..|.||||+|+..|+.++|++|+++|+++|.+|.+|.||||+|+.. |+.+++++|++.++..+ ...|
T Consensus 548 G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~-g~~~iv~~L~~~~~~~~----~~~~ 622 (823)
T PLN03192 548 KLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISA-KHHKIFRILYHFASISD----PHAA 622 (823)
T ss_pred CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHh-CCHHHHHHHHhcCcccC----cccC
Confidence 456788999999999999999999999999999999999999999999999997 99999999999987766 3467
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCC-CCHHHHHHhh
Q 010517 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYG-PSFLEALAPQ 164 (508)
Q Consensus 87 ~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g-~tpL~~~A~~ 164 (508)
.++||+|+..|+.+++++|+++|++++.+|.+|.||||+|+..|+.+++++|+++|++++ ..|..| .||++ ++..
T Consensus 623 ~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~--~~~~~g~~t~~~-l~~~ 698 (823)
T PLN03192 623 GDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVD--KANTDDDFSPTE-LREL 698 (823)
T ss_pred chHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC--CCCCCCCCCHHH-HHHH
Confidence 799999999999999999999999999999999999999999999999999999999999 888888 99998 5543
No 52
>PHA02792 ankyrin-like protein; Provisional
Probab=99.89 E-value=4.5e-22 Score=206.42 Aligned_cols=205 Identities=13% Similarity=0.060 Sum_probs=166.2
Q ss_pred CcccccCCchHHHHHHHHcC-------CHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCC--CHHHHHHHH--------
Q 010517 9 NQHQQRQSKDELLYQWVIAG-------DVDAIRALRSQGASLEWMDKEGKTPLIVACMDSG--LINVAKTLI-------- 71 (508)
Q Consensus 9 ~~~~~~~~g~t~L~~Aa~~g-------~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g--~~~~v~~Ll-------- 71 (508)
..|.+|+.|.||||+|+..+ +.++++.||++|++++.+|..|.||||+|+.+ . ..|++++|+
T Consensus 167 ~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~-~~i~~ei~~~L~~~~~~~~~ 245 (631)
T PHA02792 167 TTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDK-CDIKREIFDALFDSNYSGNE 245 (631)
T ss_pred ccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHc-ccchHHHHHHHHhccccccc
Confidence 45678999999999999999 89999999999999999999999999999886 5 344444444
Q ss_pred --------------------------------------------------------------------------------
Q 010517 72 -------------------------------------------------------------------------------- 71 (508)
Q Consensus 72 -------------------------------------------------------------------------------- 71 (508)
T Consensus 246 ~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK 325 (631)
T PHA02792 246 LMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIK 325 (631)
T ss_pred hHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHH
Confidence
Q ss_pred ---HcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCC--CcHHHHHHHhCCH---HHHHHHHHcCC
Q 010517 72 ---ELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDC--HTALGVARIKGHI---NVVRAIESHIC 143 (508)
Q Consensus 72 ---~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g--~TpLh~A~~~g~~---~~v~~Ll~~ga 143 (508)
++|++.+ ...+...+|.|+..|+.++|++|+++||+++.+|..| .||||+|...... +++++|+++|+
T Consensus 326 ~LId~Ga~~~----r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GA 401 (631)
T PHA02792 326 CMIDEGATLY----RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYID 401 (631)
T ss_pred HHHHCCCccc----cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCC
Confidence 4444332 1124567899999999999999999999999999875 6999998776654 46889999999
Q ss_pred cccccccccCCCCHHHHHHhhcCCHHHHHHhhhCCCCCCCCCcccccccccccc--ccChHHHHHHHHhhhcCCCCCCCC
Q 010517 144 YFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQ--DVQPRAVIALWKAKIDEPKFHQPD 221 (508)
Q Consensus 144 ~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~--~~~~~~v~~l~~~~~~~~~~~~~d 221 (508)
+++ .+|..|.|||| .|+..++.+++++|+++|++++.++..++++++.+.. ......+...+...++.++.++.+
T Consensus 402 DIN--~kD~~G~TPLh-~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~ 478 (631)
T PHA02792 402 DIN--KIDKHGRSILY-YCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPT 478 (631)
T ss_pred ccc--cccccCcchHH-HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCC
Confidence 999 89999999999 9999999999999999999999999999999998864 222233333344445555555555
No 53
>PHA02741 hypothetical protein; Provisional
Probab=99.88 E-value=7.5e-22 Score=177.63 Aligned_cols=139 Identities=16% Similarity=0.117 Sum_probs=124.3
Q ss_pred HHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHH------cCCCCcccCCCCCCCcHHHHHHHcCC----H
Q 010517 30 VDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIE------LGANINAYRPGGRGGTPLHHAAKRGL----E 99 (508)
Q Consensus 30 ~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~------~ga~~n~~~~d~~g~tpLh~A~~~g~----~ 99 (508)
..+++.++ +.+|..|.||||+|+.. |+.+++++|+. .|++++.+ |..|+||||+|+..|+ .
T Consensus 7 ~~~~~~~~------~~~~~~g~t~Lh~Aa~~-g~~~~v~~l~~~~~~~~~ga~in~~--d~~g~T~Lh~A~~~g~~~~~~ 77 (169)
T PHA02741 7 MTCLEEMI------AEKNSEGENFFHEAARC-GCFDIIARFTPFIRGDCHAAALNAT--DDAGQMCIHIAAEKHEAQLAA 77 (169)
T ss_pred HHHHHHHh------hccccCCCCHHHHHHHc-CCHHHHHHHHHHhccchhhhhhhcc--CCCCCcHHHHHHHcCChHHHH
Confidence 34555554 45788999999999998 99999999864 36888888 8899999999999999 5
Q ss_pred HHHHHHHHCCCCccccCC-CCCcHHHHHHHhCCHHHHHHHHH-cCCcccccccccCCCCHHHHHHhhcCCHHHHHHhhhC
Q 010517 100 PTVRLLLSCGANALVRND-DCHTALGVARIKGHINVVRAIES-HICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPC 177 (508)
Q Consensus 100 ~~v~~Ll~~ga~~~~~d~-~g~TpLh~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~ 177 (508)
+++++|+++|++++.++. .|+||||+|+..++.+++++|+. .|++++ .+|.+|+|||| +|...++.+++++|++.
T Consensus 78 ~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~--~~n~~g~tpL~-~A~~~~~~~iv~~L~~~ 154 (169)
T PHA02741 78 EIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLH--FCNADNKSPFE-LAIDNEDVAMMQILREI 154 (169)
T ss_pred HHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC--cCCCCCCCHHH-HHHHCCCHHHHHHHHHH
Confidence 899999999999999985 99999999999999999999997 599998 89999999999 99999999999999988
Q ss_pred CCC
Q 010517 178 GTA 180 (508)
Q Consensus 178 g~~ 180 (508)
++.
T Consensus 155 ~~~ 157 (169)
T PHA02741 155 VAT 157 (169)
T ss_pred HHH
Confidence 764
No 54
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.87 E-value=3.3e-22 Score=177.25 Aligned_cols=133 Identities=20% Similarity=0.149 Sum_probs=108.8
Q ss_pred CcccccCCchHHHHHHHHcCCHHHHHHHHHcCC--C-----CCccCCCCChHHHHHHHhCCCH---HHHHHHHHcCCCCc
Q 010517 9 NQHQQRQSKDELLYQWVIAGDVDAIRALRSQGA--S-----LEWMDKEGKTPLIVACMDSGLI---NVAKTLIELGANIN 78 (508)
Q Consensus 9 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~--~-----~~~~d~~G~TpLh~Aa~~~g~~---~~v~~Ll~~ga~~n 78 (508)
..+.+|.+|.||||+|++.|+. +++++..+. + ++.+|.+|+||||+|+.. |+. +++++|+++|+++|
T Consensus 9 ~~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~-~~~~~~e~v~~Ll~~gadin 85 (154)
T PHA02736 9 FASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNP-DKADPQEKLKLLMEWGADIN 85 (154)
T ss_pred HHHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeeccc-CchhHHHHHHHHHHcCCCcc
Confidence 3466788899999999999984 333332222 2 335688899999999987 765 56889999999999
Q ss_pred ccCCC-CCCCcHHHHHHHcCCHHHHHHHHH-CCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCccc
Q 010517 79 AYRPG-GRGGTPLHHAAKRGLEPTVRLLLS-CGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (508)
Q Consensus 79 ~~~~d-~~g~tpLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~ 146 (508)
.+ + ..|+||||+|+..|+.+++++|+. .|++++.+|..|.||||+|+..|+.+++++|+++|++.+
T Consensus 86 ~~--~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 86 GK--ERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred cc--CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 87 5 589999999999999999999997 489999999999999999999999999999999988754
No 55
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.87 E-value=4.9e-22 Score=196.07 Aligned_cols=172 Identities=28% Similarity=0.329 Sum_probs=134.6
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHH
Q 010517 21 LYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEP 100 (508)
Q Consensus 21 L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~ 100 (508)
+.-|+..|+.+-|+.||..|+++|..+.+|.|+||-+|.. .+.+||++|+++|++||.. |..||||||.|+..|+..
T Consensus 44 ~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id-~~~e~v~~l~e~ga~Vn~~--d~e~wtPlhaaascg~~~ 120 (527)
T KOG0505|consen 44 FLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACID-DNLEMVKFLVENGANVNAQ--DNEGWTPLHAAASCGYLN 120 (527)
T ss_pred HHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhc-ccHHHHHHHHHhcCCcccc--ccccCCcchhhcccccHH
Confidence 4445566666667777766666666666777777776665 6667777777777777666 666677777777777777
Q ss_pred HHHHHHHCCCC-----------------------------------------------------------ccccCCCCCc
Q 010517 101 TVRLLLSCGAN-----------------------------------------------------------ALVRNDDCHT 121 (508)
Q Consensus 101 ~v~~Ll~~ga~-----------------------------------------------------------~~~~d~~g~T 121 (508)
++++|+.+|++ .+..+..|.|
T Consensus 121 i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T 200 (527)
T KOG0505|consen 121 IVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGAT 200 (527)
T ss_pred HHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccch
Confidence 77776666654 2456667999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHHHHHhhhCCCCCCCCCccccccccccccc
Q 010517 122 ALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQD 198 (508)
Q Consensus 122 pLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~ 198 (508)
.||+|+.+|+.++.++|++.|.+++ ++|.+|+|||| +|+.++..+++++|+++|++++.....+++++-.+..+
T Consensus 201 ~lHvAaa~Gy~e~~~lLl~ag~~~~--~~D~dgWtPlH-AAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~dee 274 (527)
T KOG0505|consen 201 ALHVAAANGYTEVAALLLQAGYSVN--IKDYDGWTPLH-AAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADEE 274 (527)
T ss_pred HHHHHHhhhHHHHHHHHHHhccCcc--cccccCCCccc-HHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhhh
Confidence 9999999999999999999999999 99999999999 99999999999999999999998887777776665543
No 56
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.87 E-value=1.1e-21 Score=216.86 Aligned_cols=227 Identities=16% Similarity=0.087 Sum_probs=170.4
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCChHHH-HHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHH
Q 010517 15 QSKDELLYQWVIAGDVDAIRALRSQ--GASLEWMDKEGKTPLI-VACMDSGLINVAKTLIELGANINAYRPGGRGGTPLH 91 (508)
Q Consensus 15 ~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~d~~G~TpLh-~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh 91 (508)
..++..|+.|++.|+.+.|+.+++. +.++|..|..|+|||| .|+. +++.+++++|+++|+ . +..|.||||
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~-~~~~eiv~lLl~~g~----~--~~~G~T~Lh 87 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIE-NENLELTELLLNLSC----R--GAVGDTLLH 87 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHh-cChHHHHHHHHhCCC----C--CCcChHHHH
Confidence 4578999999999999999999998 8999999999999999 5555 499999999999997 3 778999999
Q ss_pred HHHHcC---CHHHHHHHHHCCCC------cc----ccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccc-------
Q 010517 92 HAAKRG---LEPTVRLLLSCGAN------AL----VRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLRE------- 151 (508)
Q Consensus 92 ~A~~~g---~~~~v~~Ll~~ga~------~~----~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~------- 151 (508)
.|+..+ ...++.+++..+.+ ++ ..+..|.||||+|+.+|+.++|++|+++|++++ .++
T Consensus 88 ~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~--~~~~~~~~~~ 165 (743)
T TIGR00870 88 AISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVP--ARACGDFFVK 165 (743)
T ss_pred HHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC--cCcCCchhhc
Confidence 999732 23344444444422 11 123579999999999999999999999999998 332
Q ss_pred -------cCCCCHHHHHHhhcCCHHHHHHhhhCCCCCCCCCccccccccccccccChHH-HHHH---HHhhhcCCCCCCC
Q 010517 152 -------FYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRA-VIAL---WKAKIDEPKFHQP 220 (508)
Q Consensus 152 -------~~g~tpL~~~A~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~-v~~l---~~~~~~~~~~~~~ 220 (508)
..|.|||| +|+..++.+++++|+++|++++..+..+.+++|.+......+. ..++ ....+........
T Consensus 166 ~~~~~~~~~g~tpL~-~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~ 244 (743)
T TIGR00870 166 SQGVDSFYHGESPLN-AAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLR 244 (743)
T ss_pred CCCCCcccccccHHH-HHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccC
Confidence 36999999 9999999999999999999999999899999998887652211 0000 1111111111122
Q ss_pred C--CcceeccCCCcchhHhhhhcCCChhHHHHHH
Q 010517 221 D--PSLTIYDQATKIRYKFASANEGDKHQLQWLD 252 (508)
Q Consensus 221 d--~~i~~~d~~~~t~l~~a~~~~~~~~~l~~l~ 252 (508)
+ ....+.|+.|.||+++|+.. +.....+.+.
T Consensus 245 ~~~el~~i~N~~g~TPL~~A~~~-g~~~l~~lLL 277 (743)
T TIGR00870 245 DSKELEVILNHQGLTPLKLAAKE-GRIVLFRLKL 277 (743)
T ss_pred ChHhhhhhcCCCCCCchhhhhhc-CCccHHHHHH
Confidence 2 23467899999999999854 3444444443
No 57
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.86 E-value=3.7e-21 Score=162.93 Aligned_cols=144 Identities=22% Similarity=0.216 Sum_probs=128.1
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHH
Q 010517 17 KDELLYQWVIAGDVDAIRALRSQGAS-LEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK 95 (508)
Q Consensus 17 g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~ 95 (508)
-.-.+.+|+..+.+..|+.||+..++ +|.+|.+|+||||-|+.+ ||.+||+.|+..|++++.+ ...||||||-||.
T Consensus 63 p~rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn-~h~div~~ll~~gAn~~a~--T~~GWTPLhSAck 139 (228)
T KOG0512|consen 63 PIRLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYN-GHLDIVHELLLSGANKEAK--TNEGWTPLHSACK 139 (228)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhc-CchHHHHHHHHccCCcccc--cccCccchhhhhc
Confidence 34568999999999999999998886 899999999999999997 9999999999999999998 8999999999999
Q ss_pred cCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCH-HHHHHHHHc-CCcccccccccCCCCHHHHHHhhcC
Q 010517 96 RGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHI-NVVRAIESH-ICYFCGWLREFYGPSFLEALAPQLM 166 (508)
Q Consensus 96 ~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~-~~v~~Ll~~-ga~~~~~~~~~~g~tpL~~~A~~~~ 166 (508)
-++.+++.+||++|+|||...+...||||+|+...+. ..+++|+.. +.... .++..+.||++ +|-+.+
T Consensus 140 WnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg--~~nn~eeta~~-iARRT~ 209 (228)
T KOG0512|consen 140 WNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPG--LKNNLEETAFD-IARRTS 209 (228)
T ss_pred ccchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChh--hhcCccchHHH-HHHHhh
Confidence 9999999999999999999999999999999987664 456666544 44444 78899999999 887664
No 58
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.85 E-value=2.4e-21 Score=182.02 Aligned_cols=158 Identities=18% Similarity=0.216 Sum_probs=140.0
Q ss_pred CCccCCCCChHHHHHHHhCCCHHHHHHHHHcC-CCCcccCCCCCCCcHHHHHHHc-----CCHHHHHHHHHCCCCccccC
Q 010517 43 LEWMDKEGKTPLIVACMDSGLINVAKTLIELG-ANINAYRPGGRGGTPLHHAAKR-----GLEPTVRLLLSCGANALVRN 116 (508)
Q Consensus 43 ~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~g-a~~n~~~~d~~g~tpLh~A~~~-----g~~~~v~~Ll~~ga~~~~~d 116 (508)
+|.-|.+|.|+||||+.+ +++++|+.||..| +++|.+ +.-|+||+|+++.. .+.++|..|.+.| |+|.+-
T Consensus 261 VNlaDsNGNTALHYsVSH-aNF~VV~~LLDSgvC~VD~q--NrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKA 336 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSH-ANFDVVSILLDSGVCDVDQQ--NRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKA 336 (452)
T ss_pred hhhhcCCCCeeeeeeecc-cchHHHHHHhccCccccccc--ccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhh
Confidence 578899999999999998 9999999999997 689988 88999999999864 4678899998876 566554
Q ss_pred -CCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHHHHHhhhC-CCCCCCCCccccccccc
Q 010517 117 -DDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPC-GTANPSKPLRFELVIYP 194 (508)
Q Consensus 117 -~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~-g~~~~~~~~~~~~~l~~ 194 (508)
..|+|+|++|+.+|+.++|+.||..|+|+| ++|.+|.|+|| .|+.+||++|+++|+.. +.|+..+|..+.+++.+
T Consensus 337 sQ~gQTALMLAVSHGr~d~vk~LLacgAdVN--iQDdDGSTALM-CA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~I 413 (452)
T KOG0514|consen 337 SQHGQTALMLAVSHGRVDMVKALLACGADVN--IQDDDGSTALM-CAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSI 413 (452)
T ss_pred hhhcchhhhhhhhcCcHHHHHHHHHccCCCc--cccCCccHHHh-hhhhhChHHHHHHHhccCcccceeecCCCchhhhh
Confidence 589999999999999999999999999999 99999999999 99999999999988765 46788888889999999
Q ss_pred cccccChHHHHHH
Q 010517 195 SLQDVQPRAVIAL 207 (508)
Q Consensus 195 a~~~~~~~~v~~l 207 (508)
+.+.++.+....|
T Consensus 414 Aleagh~eIa~ml 426 (452)
T KOG0514|consen 414 ALEAGHREIAVML 426 (452)
T ss_pred HHhcCchHHHHHH
Confidence 9998886655443
No 59
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.85 E-value=4.2e-21 Score=170.17 Aligned_cols=132 Identities=17% Similarity=0.131 Sum_probs=112.9
Q ss_pred CCccCCCCChHHHHHHHhCCCHHHHHHHHHcCC--C-----CcccCCCCCCCcHHHHHHHcCCH---HHHHHHHHCCCCc
Q 010517 43 LEWMDKEGKTPLIVACMDSGLINVAKTLIELGA--N-----INAYRPGGRGGTPLHHAAKRGLE---PTVRLLLSCGANA 112 (508)
Q Consensus 43 ~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga--~-----~n~~~~d~~g~tpLh~A~~~g~~---~~v~~Ll~~ga~~ 112 (508)
.+.+|.+|.||||+|++. |+ ++.+|+..+. + ++.+ |..|+||||+|+..|+. +++++|++.|+++
T Consensus 10 ~~~~d~~g~tpLh~A~~~-g~--~~~l~~~~~~~~~~~~~~~~~~--d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadi 84 (154)
T PHA02736 10 ASEPDIEGENILHYLCRN-GG--VTDLLAFKNAISDENRYLVLEY--NRHGKQCVHIVSNPDKADPQEKLKLLMEWGADI 84 (154)
T ss_pred HHhcCCCCCCHHHHHHHh-CC--HHHHHHHHHHhcchhHHHHHHh--cCCCCEEEEeecccCchhHHHHHHHHHHcCCCc
Confidence 356788999999999998 76 3444443332 2 2233 78999999999999987 4689999999999
Q ss_pred cccC-CCCCcHHHHHHHhCCHHHHHHHHH-cCCcccccccccCCCCHHHHHHhhcCCHHHHHHhhhCCCCCC
Q 010517 113 LVRN-DDCHTALGVARIKGHINVVRAIES-HICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANP 182 (508)
Q Consensus 113 ~~~d-~~g~TpLh~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~g~~~~ 182 (508)
+.++ ..|.||||+|+..|+.+++++|++ .|++++ .+|..|.|||| +|+..++.+++++|+.+|++.+
T Consensus 85 n~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n--~~~~~g~tpL~-~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 85 NGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNME--ILNYAFKTPYY-VACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred cccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc--cccCCCCCHHH-HHHHcCCHHHHHHHHHcCCCCC
Confidence 9998 499999999999999999999998 489999 89999999999 9999999999999999998753
No 60
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.84 E-value=1.6e-20 Score=207.51 Aligned_cols=197 Identities=15% Similarity=0.073 Sum_probs=155.6
Q ss_pred ccCcccccCCchHHHH-HHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHh--CCCHHHHHHHHHcCCC------C
Q 010517 7 SMNQHQQRQSKDELLY-QWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMD--SGLINVAKTLIELGAN------I 77 (508)
Q Consensus 7 ~~~~~~~~~~g~t~L~-~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~--~g~~~~v~~Ll~~ga~------~ 77 (508)
..++|..|..|.|||| .|+..++.+++++|+++|+ .+..|.||||.|+.. .+...++++++..+.+ +
T Consensus 42 ~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~ 117 (743)
T TIGR00870 42 KLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELA 117 (743)
T ss_pred ccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhh
Confidence 4677888999999999 8889999999999999987 678899999999962 1222344444444422 1
Q ss_pred ccc--CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccC--------------CCCCcHHHHHHHhCCHHHHHHHHHc
Q 010517 78 NAY--RPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRN--------------DDCHTALGVARIKGHINVVRAIESH 141 (508)
Q Consensus 78 n~~--~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d--------------~~g~TpLh~A~~~g~~~~v~~Ll~~ 141 (508)
+.. +.+..|.||||+|+.+|+.++|++|+++|++++.++ ..|.||||+|+..|+.+++++|+++
T Consensus 118 ~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~ 197 (743)
T TIGR00870 118 NDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSED 197 (743)
T ss_pred ccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcC
Confidence 111 013469999999999999999999999999998653 3689999999999999999999999
Q ss_pred CCcccccccccCCCCHHHHHHhhcC---------CHHHHHHhhhCCCCC-------CCCCccccccccccccccChHHHH
Q 010517 142 ICYFCGWLREFYGPSFLEALAPQLM---------SRKIWVVVIPCGTAN-------PSKPLRFELVIYPSLQDVQPRAVI 205 (508)
Q Consensus 142 ga~~~~~~~~~~g~tpL~~~A~~~~---------~~~i~~~Ll~~g~~~-------~~~~~~~~~~l~~a~~~~~~~~v~ 205 (508)
|++++ .+|..|+|||| +|+..+ ...+.++++..++.. ...+..+.++++.+.+.++...+.
T Consensus 198 gadin--~~d~~g~T~Lh-~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~ 274 (743)
T TIGR00870 198 PADIL--TADSLGNTLLH-LLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFR 274 (743)
T ss_pred Ccchh--hHhhhhhHHHH-HHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHH
Confidence 99999 89999999999 888776 234666676666554 344667889999999888887777
Q ss_pred HHHHh
Q 010517 206 ALWKA 210 (508)
Q Consensus 206 ~l~~~ 210 (508)
.++..
T Consensus 275 lLL~~ 279 (743)
T TIGR00870 275 LKLAI 279 (743)
T ss_pred HHHHH
Confidence 66654
No 61
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.83 E-value=8.8e-20 Score=176.19 Aligned_cols=131 Identities=15% Similarity=0.166 Sum_probs=116.0
Q ss_pred CCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCC--CCCCCcHHHHHHHcCCHHHHHHHHHCCCCcccc-CCCC
Q 010517 43 LEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRP--GGRGGTPLHHAAKRGLEPTVRLLLSCGANALVR-NDDC 119 (508)
Q Consensus 43 ~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~--d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~-d~~g 119 (508)
+..+|..|.|++++++...|+.+++++|+++|+++|.++. +..|.||||+|+..++.+++++|+++|++++.. +..|
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g 104 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAK 104 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCC
Confidence 3457888888766666555899999999999999998732 468999999999999999999999999999986 4689
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHHHHHhhh
Q 010517 120 HTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIP 176 (508)
Q Consensus 120 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~ 176 (508)
.||||+|+..++.+++++|++.|++++ .+|.+|.|||| +|+..++.+++.++..
T Consensus 105 ~TpLh~Aa~~~~~eivklLL~~GAdin--~kd~~G~TpL~-~A~~~~~~~~~~~~~~ 158 (300)
T PHA02884 105 ITPLYISVLHGCLKCLEILLSYGADIN--IQTNDMVTPIE-LALMICNNFLAFMICD 158 (300)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCCHHH-HHHHhCChhHHHHhcC
Confidence 999999999999999999999999999 89999999999 9999888888876653
No 62
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.82 E-value=2.2e-20 Score=184.47 Aligned_cols=153 Identities=27% Similarity=0.326 Sum_probs=140.1
Q ss_pred cCcccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccC------
Q 010517 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYR------ 81 (508)
Q Consensus 8 ~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~------ 81 (508)
.+.+..+.+|.|+||.++...+.++|++|+++|++||..|..|+||||.|+.. |+..++++|+.+|+++-..+
T Consensus 64 a~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaasc-g~~~i~~~li~~gA~~~avNsdg~~P 142 (527)
T KOG0505|consen 64 ASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASC-GYLNIVEYLIQHGANLLAVNSDGNMP 142 (527)
T ss_pred CCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhccc-ccHHHHHHHHHhhhhhhhccCCCCCc
Confidence 44577788999999999999999999999999999999999999999999986 99999999999998765431
Q ss_pred ---------------------------------------------------CCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q 010517 82 ---------------------------------------------------PGGRGGTPLHHAAKRGLEPTVRLLLSCGA 110 (508)
Q Consensus 82 ---------------------------------------------------~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga 110 (508)
++..|.|+||.|+.+|..++.++|+++|.
T Consensus 143 ~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~ 222 (527)
T KOG0505|consen 143 YDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGY 222 (527)
T ss_pred cccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhcc
Confidence 12238899999999999999999999999
Q ss_pred CccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhh
Q 010517 111 NALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (508)
Q Consensus 111 ~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~ 164 (508)
+++.+|.+|+||||.|+..|+.++.++|+++|++++ .....|.||+. +|..
T Consensus 223 ~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d--~~t~~g~~p~d-v~de 273 (527)
T KOG0505|consen 223 SVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMD--AKTKMGETPLD-VADE 273 (527)
T ss_pred CcccccccCCCcccHHHHhhhHhHHHHHHHhhcccc--hhhhcCCCCcc-chhh
Confidence 999999999999999999999999999999999999 89999999999 5543
No 63
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.81 E-value=2e-20 Score=170.63 Aligned_cols=155 Identities=23% Similarity=0.250 Sum_probs=121.4
Q ss_pred HHcCCHHHHHHHHH-cCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHH
Q 010517 25 VIAGDVDAIRALRS-QGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVR 103 (508)
Q Consensus 25 a~~g~~~~v~~Ll~-~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~ 103 (508)
++.|+.-.|++-|+ ..-|+|.-|..|.+|||+||+. |+..+|+.|+..|+.+|.. +.-..||||+|+.+||.++|+
T Consensus 8 cregna~qvrlwld~tehdln~gddhgfsplhwaake-gh~aivemll~rgarvn~t--nmgddtplhlaaahghrdivq 84 (448)
T KOG0195|consen 8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKE-GHVAIVEMLLSRGARVNST--NMGDDTPLHLAAAHGHRDIVQ 84 (448)
T ss_pred hhcCCeEEEEEEecCcccccccccccCcchhhhhhhc-ccHHHHHHHHhcccccccc--cCCCCcchhhhhhcccHHHHH
Confidence 55565555554343 5567888888899999999986 8899999999999888887 556678999999999999999
Q ss_pred HHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHHHHHhhhCCCCCCC
Q 010517 104 LLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPS 183 (508)
Q Consensus 104 ~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~g~~~~~ 183 (508)
.||++.+|+|..|..|.|||||||..|+..+.+-|+..|+.++ +-|++|.|||. .|.-.-...+.++.-++|...+.
T Consensus 85 kll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~--icnk~g~tpld-kakp~l~~~l~e~aek~gq~~nr 161 (448)
T KOG0195|consen 85 KLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVN--ICNKKGMTPLD-KAKPMLKNTLLEIAEKHGQSPNR 161 (448)
T ss_pred HHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceee--ecccCCCCchh-hhchHHHHHHHHHHHHhCCCCCc
Confidence 9999889999999999999999999999889999999998888 88889999988 55444344444555566666654
Q ss_pred CC
Q 010517 184 KP 185 (508)
Q Consensus 184 ~~ 185 (508)
.+
T Consensus 162 ip 163 (448)
T KOG0195|consen 162 IP 163 (448)
T ss_pred cc
Confidence 44
No 64
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.81 E-value=7.8e-20 Score=166.73 Aligned_cols=135 Identities=25% Similarity=0.269 Sum_probs=119.9
Q ss_pred CcccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCc
Q 010517 9 NQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGT 88 (508)
Q Consensus 9 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~t 88 (508)
..|.-|..|.+|||||++.|+..+|+.||.+|+.+|..+.-..||||+|+.+ ||.++|+.|+++.+|+|.. +.+|+|
T Consensus 26 dln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaah-ghrdivqkll~~kadvnav--nehgnt 102 (448)
T KOG0195|consen 26 DLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAH-GHRDIVQKLLSRKADVNAV--NEHGNT 102 (448)
T ss_pred ccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhc-ccHHHHHHHHHHhcccchh--hccCCC
Confidence 3456688899999999999999999999999999999999999999999998 9999999999999999999 899999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCccc
Q 010517 89 PLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (508)
Q Consensus 89 pLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~ 146 (508)
||||||.-|...+.+-|+..|+.++..|++|.|||..|--.-...+.++-.+.|.+++
T Consensus 103 plhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~n 160 (448)
T KOG0195|consen 103 PLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPN 160 (448)
T ss_pred chhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999999999998754333334444455666655
No 65
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.80 E-value=3.6e-19 Score=181.67 Aligned_cols=207 Identities=22% Similarity=0.185 Sum_probs=178.1
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcC-------------CCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCC
Q 010517 18 DELLYQWVIAGDVDAIRALRSQG-------------ASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGG 84 (508)
Q Consensus 18 ~t~L~~Aa~~g~~~~v~~Ll~~g-------------~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~ 84 (508)
.+=|.-|++.|+++.|..||+.. .++|..|.+|.|+||+|+.+ |+.+++++|+++.+-+++. |.
T Consensus 4 ~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Ln-g~~~is~llle~ea~ldl~--d~ 80 (854)
T KOG0507|consen 4 KQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLN-GQNQISKLLLDYEALLDLC--DT 80 (854)
T ss_pred hhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhc-CchHHHHHHhcchhhhhhh--hc
Confidence 46678899999999999999841 24578899999999999998 9999999999999999998 79
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhh
Q 010517 85 RGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (508)
Q Consensus 85 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~ 164 (508)
.|.+|||+|+..|+.++|++|+.++..+|..+..|.||||.|+++||.+++.+|+++|++.- ++|..+.|+|. +|++
T Consensus 81 kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~--i~nns~~t~ld-lA~q 157 (854)
T KOG0507|consen 81 KGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPF--IRNNSKETVLD-LASR 157 (854)
T ss_pred cCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCcc--ccCcccccHHH-HHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 99999999999 9999
Q ss_pred cCCHHHHHHhhhCCCCC--------CCCCccccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhH
Q 010517 165 LMSRKIWVVVIPCGTAN--------PSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYK 236 (508)
Q Consensus 165 ~~~~~i~~~Ll~~g~~~--------~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~ 236 (508)
.|..+++..|+...... ..+++...+++|.+.++++.+.+..++.. +.| ++...+.| |+||
T Consensus 158 fgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~a--------g~d--in~~t~~g-talh 226 (854)
T KOG0507|consen 158 FGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEA--------GFD--INYTTEDG-TALH 226 (854)
T ss_pred hhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhc--------CCC--cccccccc-hhhh
Confidence 99999999988763221 23444567889999999986665554443 556 66655554 7888
Q ss_pred hhhhc
Q 010517 237 FASAN 241 (508)
Q Consensus 237 ~a~~~ 241 (508)
.|+..
T Consensus 227 eaalc 231 (854)
T KOG0507|consen 227 EAALC 231 (854)
T ss_pred hHhhc
Confidence 88854
No 66
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.77 E-value=2.4e-18 Score=137.49 Aligned_cols=89 Identities=36% Similarity=0.517 Sum_probs=71.4
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHH
Q 010517 21 LYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEP 100 (508)
Q Consensus 21 L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~ 100 (508)
||+|++.|+.+++++|++.+.+++. |.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+..|+.+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~-~~~~~~~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~ 73 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAEN-GNLEIVKLLLENGADINSQ--DKNGNTALHYAAENGNLE 73 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHT-TTHHHHHHHHHTTTCTT-B--STTSSBHHHHHHHTTHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHc-CCHHHHHHHHHhccccccc--CCCCCCHHHHHHHcCCHH
Confidence 6888888888888888888877766 77888888887 8888888888888888887 678888888888888888
Q ss_pred HHHHHHHCCCCccccC
Q 010517 101 TVRLLLSCGANALVRN 116 (508)
Q Consensus 101 ~v~~Ll~~ga~~~~~d 116 (508)
++++|+++|++++.+|
T Consensus 74 ~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 74 IVKLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHHHTTT-TTSS-
T ss_pred HHHHHHHcCCCCCCcC
Confidence 8888888888887664
No 67
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.76 E-value=1.4e-17 Score=141.01 Aligned_cols=124 Identities=34% Similarity=0.527 Sum_probs=101.7
Q ss_pred ccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHH
Q 010517 13 QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (508)
Q Consensus 13 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~ 92 (508)
+|.+|.|+||+|+..|+.+++++|++.+.+.+..+..|.||||+|+.. +..+++++|+++|++++.. +..|.||+|+
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~-~~~~~~~~ll~~~~~~~~~--~~~~~~~l~~ 79 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKN-GHLEIVKLLLEKGADVNAR--DKDGNTPLHL 79 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCcccc--CCCCCCHHHH
Confidence 456788888888888888888888888888777888888888888887 7788888888888777776 6778888888
Q ss_pred HHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHH
Q 010517 93 AAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIE 139 (508)
Q Consensus 93 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll 139 (508)
|+..++.+++++|++.+.+++..+..|.|||++|...++.+++++|+
T Consensus 80 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 80 AARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred HHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 88888888888888888778788888888888888888888887763
No 68
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.76 E-value=8.8e-19 Score=183.60 Aligned_cols=212 Identities=24% Similarity=0.220 Sum_probs=181.5
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHH
Q 010517 15 QSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAA 94 (508)
Q Consensus 15 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~ 94 (508)
.+-+|+|-.|+..||-|+|++|+.+|+++..+|+.|.+||.+|+-. ||..+|+.|+++.++++.+. |..+.|+|-+||
T Consensus 755 ~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaata-gh~tvV~~llk~ha~veaQs-drtkdt~lSlac 832 (2131)
T KOG4369|consen 755 PNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATA-GHITVVQDLLKAHADVEAQS-DRTKDTMLSLAC 832 (2131)
T ss_pred ccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhccc-CchHHHHHHHhhhhhhhhhc-ccccCceEEEec
Confidence 4457999999999999999999999999999999999999999986 99999999999999999986 899999999999
Q ss_pred HcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHHHHHh
Q 010517 95 KRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVV 174 (508)
Q Consensus 95 ~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~L 174 (508)
..|+.++|++||.+|++-..++...+|||.+|..-|++++|.+|+..|++++...-.+.|-.||+ +|..+||......|
T Consensus 833 sggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLm-latmngh~~at~~l 911 (2131)
T KOG4369|consen 833 SGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLM-LATMNGHQAATLSL 911 (2131)
T ss_pred CCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhh-hhhhccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999985566778999999 99999999999999
Q ss_pred hhCCCCCCCCC-ccccccccccccccChHHHHHHHHhhhcCCCCCCCCCcceeccCCCcchhHhhh
Q 010517 175 IPCGTANPSKP-LRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFAS 239 (508)
Q Consensus 175 l~~g~~~~~~~-~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~d~~i~~~d~~~~t~l~~a~ 239 (508)
++.|.|++..- ...++++-.+.-.+.+..+..|+... ++ +..+-+.|-|||..++
T Consensus 912 l~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~--------an--vehRaktgltplme~A 967 (2131)
T KOG4369|consen 912 LQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQ--------AN--VEHRAKTGLTPLMEMA 967 (2131)
T ss_pred hcccchhccccccccccceeeccccCcchHHHHHHHHh--------hh--hhhhcccCCcccchhh
Confidence 99999998643 23455565666566666666655442 22 3344455555555444
No 69
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.75 E-value=8.1e-18 Score=142.75 Aligned_cols=147 Identities=21% Similarity=0.094 Sum_probs=119.4
Q ss_pred HHHHHHHhCCCHHHHHHHHHcCCC-CcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCC
Q 010517 53 PLIVACMDSGLINVAKTLIELGAN-INAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGH 131 (508)
Q Consensus 53 pLh~Aa~~~g~~~~v~~Ll~~ga~-~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~ 131 (508)
-+.+|+.. +.+..|+.||+..++ +|.+ |.+|.||||-|+.+||.+||+.|+..|++++.+...|+||||-|+..++
T Consensus 66 l~lwaae~-nrl~eV~~lL~e~an~vNtr--D~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN 142 (228)
T KOG0512|consen 66 LLLWAAEK-NRLTEVQRLLSEKANHVNTR--DEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNN 142 (228)
T ss_pred HHHHHHhh-ccHHHHHHHHHhcccccccc--ccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccc
Confidence 46788887 899999999988776 7888 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcccccccccCCCCHHHHHHhhcC-CHHHHHHhh-hCCCCCCCCCccccccccccccccChHHHH
Q 010517 132 INVVRAIESHICYFCGWLREFYGPSFLEALAPQLM-SRKIWVVVI-PCGTANPSKPLRFELVIYPSLQDVQPRAVI 205 (508)
Q Consensus 132 ~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~-~~~i~~~Ll-~~g~~~~~~~~~~~~~l~~a~~~~~~~~v~ 205 (508)
.+++.+||++|+|++ .......|||| +|+... ....+.+|+ ..+.+...+....++++.++-+.+....+.
T Consensus 143 ~~va~~LLqhgaDVn--A~t~g~ltpLh-laa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~s~~lf 215 (228)
T KOG0512|consen 143 FEVAGRLLQHGADVN--AQTKGLLTPLH-LAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSMSHYLF 215 (228)
T ss_pred hhHHHHHHhccCccc--ccccccchhhH-HhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhhhHHHH
Confidence 999999999999999 78888899999 666554 455566554 344455555555666666655444433333
No 70
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.73 E-value=8.2e-17 Score=136.33 Aligned_cols=125 Identities=35% Similarity=0.475 Sum_probs=117.5
Q ss_pred ccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHH
Q 010517 45 WMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALG 124 (508)
Q Consensus 45 ~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh 124 (508)
.+|.+|.||||+|+.. ++.+++++|++++.+.+.. +..|.||||+|+..++.+++++|++.|++++..+..|.||+|
T Consensus 2 ~~~~~g~t~l~~a~~~-~~~~~i~~li~~~~~~~~~--~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~ 78 (126)
T cd00204 2 ARDEDGRTPLHLAASN-GHLEVVKLLLENGADVNAK--DNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLH 78 (126)
T ss_pred CcCcCCCCHHHHHHHc-CcHHHHHHHHHcCCCCCcc--CCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 4578899999999998 9999999999999998777 889999999999999999999999999999999999999999
Q ss_pred HHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHHHHHhh
Q 010517 125 VARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVI 175 (508)
Q Consensus 125 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll 175 (508)
+|+..++.+++++|++++.+++ ..+..|.||++ .|...++.+++++|+
T Consensus 79 ~a~~~~~~~~~~~L~~~~~~~~--~~~~~~~~~l~-~~~~~~~~~~~~~Ll 126 (126)
T cd00204 79 LAARNGNLDVVKLLLKHGADVN--ARDKDGRTPLH-LAAKNGHLEVVKLLL 126 (126)
T ss_pred HHHHcCcHHHHHHHHHcCCCCc--ccCCCCCCHHH-HHHhcCCHHHHHHhC
Confidence 9999999999999999998888 88999999999 999999999999875
No 71
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.73 E-value=1.8e-17 Score=171.66 Aligned_cols=166 Identities=20% Similarity=0.227 Sum_probs=144.6
Q ss_pred CcccccCCchHHHHHHHH---cCCHHHHHHHHHcCCC-CCc----cCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCccc
Q 010517 9 NQHQQRQSKDELLYQWVI---AGDVDAIRALRSQGAS-LEW----MDKEGKTPLIVACMDSGLINVAKTLIELGANINAY 80 (508)
Q Consensus 9 ~~~~~~~~g~t~L~~Aa~---~g~~~~v~~Ll~~g~~-~~~----~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~ 80 (508)
..+.+...|+|.||.|.. .++.++++.||+.-.. +|. -...|+||||+|+.+ .+.++|++|++.|||++.+
T Consensus 135 ~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~-~~~~~V~lLl~~gADV~aR 213 (782)
T KOG3676|consen 135 KLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVN-RDAELVRLLLAAGADVHAR 213 (782)
T ss_pred ccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHh-ccHHHHHHHHHcCCchhhH
Confidence 345667899999999997 4567999999985432 121 134799999999998 9999999999999999875
Q ss_pred C------C-C--------------CCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHH
Q 010517 81 R------P-G--------------GRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIE 139 (508)
Q Consensus 81 ~------~-d--------------~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll 139 (508)
- + | ..|..||-+||--++.+++++|+++|||++.+|..|+|.||..+..-..++-.+++
T Consensus 214 a~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L 293 (782)
T KOG3676|consen 214 ACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLAL 293 (782)
T ss_pred hhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHH
Confidence 1 0 1 13789999999999999999999999999999999999999999999999999999
Q ss_pred HcCCc--ccccccccCCCCHHHHHHhhcCCHHHHHHhhhCC
Q 010517 140 SHICY--FCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCG 178 (508)
Q Consensus 140 ~~ga~--~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~g 178 (508)
+.|++ .. ++|..|.|||. +|+..|..++.+.+++..
T Consensus 294 ~~ga~~l~~--v~N~qgLTPLt-LAaklGk~emf~~ile~~ 331 (782)
T KOG3676|consen 294 ELGANALEH--VRNNQGLTPLT-LAAKLGKKEMFQHILERR 331 (782)
T ss_pred hcCCCcccc--ccccCCCChHH-HHHHhhhHHHHHHHHHhh
Confidence 99999 66 89999999999 999999999999999883
No 72
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.73 E-value=2.6e-17 Score=131.44 Aligned_cols=86 Identities=35% Similarity=0.470 Sum_probs=78.9
Q ss_pred HHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHH
Q 010517 54 LIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHIN 133 (508)
Q Consensus 54 Lh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~ 133 (508)
||+|+.. |+.+++++|++.+.+++. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 1 L~~A~~~-~~~~~~~~ll~~~~~~~~------~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 73 (89)
T PF12796_consen 1 LHIAAQN-GNLEILKFLLEKGADINL------GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLE 73 (89)
T ss_dssp HHHHHHT-TTHHHHHHHHHTTSTTTS------SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHH
T ss_pred CHHHHHc-CCHHHHHHHHHCcCCCCC------CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHH
Confidence 7999998 999999999999877763 789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccc
Q 010517 134 VVRAIESHICYFC 146 (508)
Q Consensus 134 ~v~~Ll~~ga~~~ 146 (508)
++++|+++|++++
T Consensus 74 ~~~~Ll~~g~~~~ 86 (89)
T PF12796_consen 74 IVKLLLEHGADVN 86 (89)
T ss_dssp HHHHHHHTTT-TT
T ss_pred HHHHHHHcCCCCC
Confidence 9999999999988
No 73
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.72 E-value=5.3e-18 Score=177.87 Aligned_cols=219 Identities=20% Similarity=0.181 Sum_probs=162.9
Q ss_pred ccCcccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCcc-CCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCC
Q 010517 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWM-DKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (508)
Q Consensus 7 ~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~-d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~ 85 (508)
+.|++.+|+.|.+||.+|+..||..+|+.||++.++++.+ |+.+.|+|-+||. +|+.++|++||.+|++-..+ +..
T Consensus 780 ganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacs-ggr~~vvelLl~~gankehr--nvs 856 (2131)
T KOG4369|consen 780 GANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACS-GGRTRVVELLLNAGANKEHR--NVS 856 (2131)
T ss_pred cccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecC-CCcchHHHHHHHhhcccccc--chh
Confidence 4678888899999999999888988888888888887654 6678888888886 47888888888888776665 556
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCccccC--CCCCcHHHHHHHhCCHHHHHHHHHcCCccccc---------------
Q 010517 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRN--DDCHTALGVARIKGHINVVRAIESHICYFCGW--------------- 148 (508)
Q Consensus 86 g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d--~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~--------------- 148 (508)
..|||-+|...|..++|++||.+|+.||.+. +.|-.||++|..+||.+.++.|++.|.++|..
T Consensus 857 DytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fq 936 (2131)
T KOG4369|consen 857 DYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQ 936 (2131)
T ss_pred hcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeecccc
Confidence 6777777777777777777777776666543 45666777777666666666666665555421
Q ss_pred -----------------ccccCCCCHHHHHHhhcCCHHHHHHhhhCCCCCCCCCc--cccccccccccccChHHHHHHHH
Q 010517 149 -----------------LREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPL--RFELVIYPSLQDVQPRAVIALWK 209 (508)
Q Consensus 149 -----------------~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~g~~~~~~~~--~~~~~l~~a~~~~~~~~v~~l~~ 209 (508)
.+-+.|.|||+ -++..|+.++-.+||..|+|.+..+. ...+.+-+.+..++.+.+..++
T Consensus 937 gr~evv~lLLa~~anvehRaktgltplm-e~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~ll- 1014 (2131)
T KOG4369|consen 937 GRPEVVFLLLAAQANVEHRAKTGLTPLM-EMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLL- 1014 (2131)
T ss_pred CcchHHHHHHHHhhhhhhhcccCCcccc-hhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhh-
Confidence 45667899999 89999999999999999999986654 3467777778888866555433
Q ss_pred hhhcCCCCCCCCCcceeccCCCcchhHhhh
Q 010517 210 AKIDEPKFHQPDPSLTIYDQATKIRYKFAS 239 (508)
Q Consensus 210 ~~~~~~~~~~~d~~i~~~d~~~~t~l~~a~ 239 (508)
..|..+...|++|.|+|-+++
T Consensus 1015 ---------n~~atv~v~NkkG~T~Lwla~ 1035 (2131)
T KOG4369|consen 1015 ---------NGDATVRVPNKKGCTVLWLAS 1035 (2131)
T ss_pred ---------CCccceecccCCCCcccchhc
Confidence 234447888888888887776
No 74
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.64 E-value=1.8e-15 Score=142.05 Aligned_cols=129 Identities=29% Similarity=0.362 Sum_probs=96.4
Q ss_pred CccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCC-----HHHHHHHHHCCC---Ccccc
Q 010517 44 EWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGL-----EPTVRLLLSCGA---NALVR 115 (508)
Q Consensus 44 ~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~-----~~~v~~Ll~~ga---~~~~~ 115 (508)
...+..+.+++|+++.. +..+++++|+..|++++.+ |..|.||||+|+..++ .+++++|++.|+ +.+.+
T Consensus 67 ~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~--~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~ 143 (235)
T COG0666 67 AARDLDGRLPLHSAASK-GDDKIVKLLLASGADVNAK--DADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLR 143 (235)
T ss_pred ccCCccccCHHHHHHHc-CcHHHHHHHHHcCCCcccc--cCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCcccc
Confidence 34556677777777776 7777777777777777766 6777777777777777 777777777777 45555
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHHHHHhhhCC
Q 010517 116 NDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCG 178 (508)
Q Consensus 116 d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~g 178 (508)
|..|.||||+|+..|+.+++++|++.|++++ .++..|.|+++ .|...++.++++.++..+
T Consensus 144 ~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~--~~~~~g~t~l~-~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 144 DEDGNTPLHWAALNGDADIVELLLEAGADPN--SRNSYGVTALD-PAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CCCCCchhHHHHHcCchHHHHHHHhcCCCCc--ccccCCCcchh-hhcccchHHHHHHHHhcC
Confidence 7777777777777777777777777777777 66777777777 777777777777777765
No 75
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.64 E-value=1.5e-15 Score=115.36 Aligned_cols=99 Identities=29% Similarity=0.388 Sum_probs=53.7
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCH
Q 010517 20 LLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLE 99 (508)
Q Consensus 20 ~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~ 99 (508)
-++|++++|.++-|+.....|.++|..- .|++|||||+-. |..+++++|+..|++++.+ |+.|-|||.-|+..||.
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~-GQl~ilefli~iGA~i~~k--DKygITPLLsAvwEGH~ 80 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADY-GQLSILEFLISIGANIQDK--DKYGITPLLSAVWEGHR 80 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhc-chHHHHHHHHHhccccCCc--cccCCcHHHHHHHHhhH
Confidence 3455555555555555555555544432 455555555554 5555555555555555544 55555555555555555
Q ss_pred HHHHHHHHCCCCccccCCCCCcH
Q 010517 100 PTVRLLLSCGANALVRNDDCHTA 122 (508)
Q Consensus 100 ~~v~~Ll~~ga~~~~~d~~g~Tp 122 (508)
++|++||+.|++-.....+|.+.
T Consensus 81 ~cVklLL~~GAdrt~~~PdG~~~ 103 (117)
T KOG4214|consen 81 DCVKLLLQNGADRTIHAPDGTAL 103 (117)
T ss_pred HHHHHHHHcCcccceeCCCchhH
Confidence 55555555555554444455443
No 76
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.62 E-value=2.3e-15 Score=114.41 Aligned_cols=102 Identities=26% Similarity=0.292 Sum_probs=94.7
Q ss_pred hHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCC
Q 010517 52 TPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGH 131 (508)
Q Consensus 52 TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~ 131 (508)
--++|+..+ |.++-|+..+..|-++|.. ..|++|||||+-+|..+++++|+..|++++..|++|-|||.-|+..||
T Consensus 4 ~~~~W~vkN-G~~DeVk~~v~~g~nVn~~---~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH 79 (117)
T KOG4214|consen 4 MSVAWNVKN-GEIDEVKQSVNEGLNVNEI---YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGH 79 (117)
T ss_pred hhHhhhhcc-CcHHHHHHHHHccccHHHH---hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhh
Confidence 456788987 9999999999999888864 589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcccccccccCCCCHHH
Q 010517 132 INVVRAIESHICYFCGWLREFYGPSFLE 159 (508)
Q Consensus 132 ~~~v~~Ll~~ga~~~~~~~~~~g~tpL~ 159 (508)
.++|++||++|++-. .+-.+|.+.+.
T Consensus 80 ~~cVklLL~~GAdrt--~~~PdG~~~~e 105 (117)
T KOG4214|consen 80 RDCVKLLLQNGADRT--IHAPDGTALIE 105 (117)
T ss_pred HHHHHHHHHcCcccc--eeCCCchhHHh
Confidence 999999999999988 88888988887
No 77
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.62 E-value=2e-15 Score=156.67 Aligned_cols=125 Identities=26% Similarity=0.286 Sum_probs=117.1
Q ss_pred cCCchHHHHHHHHcCCHHHHHHHHHcCCCCCcc---------C--------------CCCChHHHHHHHhCCCHHHHHHH
Q 010517 14 RQSKDELLYQWVIAGDVDAIRALRSQGASLEWM---------D--------------KEGKTPLIVACMDSGLINVAKTL 70 (508)
Q Consensus 14 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~---------d--------------~~G~TpLh~Aa~~~g~~~~v~~L 70 (508)
...|.|+||+|+.+.+.++|++||+.||||+++ | ..|..||-+||.. ++.||+++|
T Consensus 181 eY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~-nq~eivrlL 259 (782)
T KOG3676|consen 181 EYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACT-NQPEIVRLL 259 (782)
T ss_pred hhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHc-CCHHHHHHH
Confidence 457999999999999999999999999999754 1 1378899999997 999999999
Q ss_pred HHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC--ccccCCCCCcHHHHHHHhCCHHHHHHHHHc
Q 010517 71 IELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGAN--ALVRNDDCHTALGVARIKGHINVVRAIESH 141 (508)
Q Consensus 71 l~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~--~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ 141 (508)
+++|+|++.+ |..|+|.||..+.+-..++..++|++|++ ...+|+.|.|||.+|++.|+.++.+.+++.
T Consensus 260 l~~gAd~~aq--DS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 260 LAHGADPNAQ--DSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred HhcCCCCCcc--ccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 9999999999 99999999999999999999999999999 899999999999999999999999999998
No 78
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.59 E-value=2.7e-14 Score=134.06 Aligned_cols=130 Identities=35% Similarity=0.399 Sum_probs=120.7
Q ss_pred cccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCC-----HHHHHHHHHcCC---CCcccC
Q 010517 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGL-----INVAKTLIELGA---NINAYR 81 (508)
Q Consensus 10 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~-----~~~v~~Ll~~ga---~~n~~~ 81 (508)
.+.++..+.+++|+++..++..++++|+..|++++.+|.+|.||||+|+.. ++ .+++++|++.|+ ..+.+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~-~~~~~~~~~~~~~ll~~g~~~~~~~~~- 143 (235)
T COG0666 66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALN-GNPPEGNIEVAKLLLEAGADLDVNNLR- 143 (235)
T ss_pred cccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhc-CCcccchHHHHHHHHHcCCCCCCcccc-
Confidence 345566789999999999999999999999999999999999999999997 88 999999999999 55555
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcC
Q 010517 82 PGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHI 142 (508)
Q Consensus 82 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g 142 (508)
|..|+||||+|+..|+.+++++|++.|++++..+..|.|+|++|+..++.++++.|++.+
T Consensus 144 -~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 144 -DEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred -CCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 889999999999999999999999999999999999999999999999999999999886
No 79
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.58 E-value=1.2e-14 Score=132.98 Aligned_cols=123 Identities=31% Similarity=0.351 Sum_probs=114.5
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHH
Q 010517 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK 95 (508)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~ 95 (508)
.-..+|.-+...|+.+....||+---++|.+|..|+|+|+.|+.+ |+.++|++||+.|+|+|... +..+.||||+|+.
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAayk-Gnl~~v~lll~~gaDvN~~q-hg~~YTpLmFAAL 88 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYK-GNLTLVELLLELGADVNDKQ-HGTLYTPLMFAAL 88 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhc-CcHHHHHHHHHhCCCcCccc-ccccccHHHHHHH
Confidence 346899999999999999999997556899999999999999998 99999999999999999864 7889999999999
Q ss_pred cCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHH
Q 010517 96 RGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIES 140 (508)
Q Consensus 96 ~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~ 140 (508)
.|+.++.++|++.|+.....|.-|+|+-.+|+.-|+.++|.++-.
T Consensus 89 SGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN 133 (396)
T KOG1710|consen 89 SGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINN 133 (396)
T ss_pred cCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhc
Confidence 999999999999999999999999999999999999999987743
No 80
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.53 E-value=4.5e-14 Score=152.99 Aligned_cols=106 Identities=32% Similarity=0.432 Sum_probs=98.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCC
Q 010517 19 ELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGL 98 (508)
Q Consensus 19 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~ 98 (508)
..||.|+..|+.+.|++|++.|+++|.+|..|.||||+|+.. |+.+++++|+++|+++|.+ |..|+||||+|+..|+
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~-g~~eiv~~LL~~Gadvn~~--d~~G~TpLh~A~~~g~ 160 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACAN-GHVQVVRVLLEFGADPTLL--DKDGKTPLELAEENGF 160 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHC-CCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHCCc
Confidence 458999999999999999999999999999999999999997 9999999999999999998 8899999999999999
Q ss_pred HHHHHHHHHC-------CCCccccCCCCCcHHHHHH
Q 010517 99 EPTVRLLLSC-------GANALVRNDDCHTALGVAR 127 (508)
Q Consensus 99 ~~~v~~Ll~~-------ga~~~~~d~~g~TpLh~A~ 127 (508)
.+++++|+++ |++++..+..|.+|+..+.
T Consensus 161 ~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 161 REVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 9999999998 8888888888888876554
No 81
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.51 E-value=7.5e-14 Score=151.28 Aligned_cols=102 Identities=29% Similarity=0.301 Sum_probs=96.0
Q ss_pred HHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCH
Q 010517 53 PLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHI 132 (508)
Q Consensus 53 pLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~ 132 (508)
.||.|+.. |+.+++++|+++|+++|.+ |..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 85 ~L~~aa~~-G~~~~vk~LL~~Gadin~~--d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~ 161 (664)
T PTZ00322 85 ELCQLAAS-GDAVGARILLTGGADPNCR--DYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFR 161 (664)
T ss_pred HHHHHHHc-CCHHHHHHHHHCCCCCCCc--CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcH
Confidence 58899987 9999999999999999998 88999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHc-------CCcccccccccCCCCHHH
Q 010517 133 NVVRAIESH-------ICYFCGWLREFYGPSFLE 159 (508)
Q Consensus 133 ~~v~~Ll~~-------ga~~~~~~~~~~g~tpL~ 159 (508)
+++++|+++ |++.+ ..+..|.+|+.
T Consensus 162 ~iv~~Ll~~~~~~~~~ga~~~--~~~~~g~~~~~ 193 (664)
T PTZ00322 162 EVVQLLSRHSQCHFELGANAK--PDSFTGKPPSL 193 (664)
T ss_pred HHHHHHHhCCCcccccCCCCC--ccccCCCCccc
Confidence 999999999 78777 77888887777
No 82
>KOG4172 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=1.1e-15 Score=102.25 Aligned_cols=54 Identities=41% Similarity=0.976 Sum_probs=50.5
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhcc-CCccccccccccceeEeeeC
Q 010517 455 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQVIRLYTV 508 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~CP~Cr~~i~~~i~i~~~ 508 (508)
.+|.||+|.+.+.|+..|||++.|++|..++++. ...||+||++|.++|+-|++
T Consensus 8 dECTICye~pvdsVlYtCGHMCmCy~Cg~rl~~~~~g~CPiCRapi~dvIkTY~s 62 (62)
T KOG4172|consen 8 DECTICYEHPVDSVLYTCGHMCMCYACGLRLKKALHGCCPICRAPIKDVIKTYRS 62 (62)
T ss_pred cceeeeccCcchHHHHHcchHHhHHHHHHHHHHccCCcCcchhhHHHHHHHhhcC
Confidence 6999999999999999999999999999999884 67899999999999999874
No 83
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=8e-14 Score=137.09 Aligned_cols=121 Identities=28% Similarity=0.332 Sum_probs=93.8
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHH
Q 010517 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK 95 (508)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~ 95 (508)
+-.-.|.-|+..|.+++|+.++..--|+...|.+|.|+||-|+.. ||.+||++|++.|+++|.. |.+||||||.|+.
T Consensus 549 nPLaLLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCa-ghyeIVkFLi~~ganVNa~--DSdGWTPLHCAAS 625 (752)
T KOG0515|consen 549 NPLALLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICA-GHYEIVKFLIEFGANVNAA--DSDGWTPLHCAAS 625 (752)
T ss_pred chHHHHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhc-chhHHHHHHHhcCCcccCc--cCCCCchhhhhhh
Confidence 334556778888888888888887777878888888888888875 8888888888888888887 8888888888888
Q ss_pred cCCHHHHHHHHHCCCCccccC-CCCCcHHHHHH--HhCCHHHHHHHH
Q 010517 96 RGLEPTVRLLLSCGANALVRN-DDCHTALGVAR--IKGHINVVRAIE 139 (508)
Q Consensus 96 ~g~~~~v~~Ll~~ga~~~~~d-~~g~TpLh~A~--~~g~~~~v~~Ll 139 (508)
.++..+++.|++.|+-|.... .++.|+..-+- ..|+..|.+||-
T Consensus 626 CNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~ 672 (752)
T KOG0515|consen 626 CNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLY 672 (752)
T ss_pred cCchHHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHH
Confidence 888888888888887765543 46667665443 456777777774
No 84
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.46 E-value=5.8e-14 Score=101.07 Aligned_cols=55 Identities=42% Similarity=0.501 Sum_probs=21.9
Q ss_pred HHHcC-CCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHH
Q 010517 36 LRSQG-ASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHA 93 (508)
Q Consensus 36 Ll~~g-~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A 93 (508)
||++| ++++.+|..|+||||+||.. |+.+++++|++.|++++.+ |..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~-g~~~~v~~Ll~~g~d~~~~--d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARY-GHSEVVRLLLQNGADPNAK--DKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHH-T-HHHHHHHHHCT--TT-----TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHc-CcHHHHHHHHHCcCCCCCC--cCCCCCHHHhC
Confidence 45555 56666666666666666665 6666666666666666666 56666666665
No 85
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.44 E-value=1e-13 Score=99.84 Aligned_cols=55 Identities=45% Similarity=0.631 Sum_probs=28.1
Q ss_pred HHHcC-CCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHH
Q 010517 70 LIELG-ANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVA 126 (508)
Q Consensus 70 Ll~~g-a~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A 126 (508)
||++| +++|.+ |..|+||||+|+.+|+.+++++|++.|++++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~--d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQ--DKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT-----TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCc--CCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 56677 777777 77888888888888888888888888888888888888888876
No 86
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.43 E-value=2.9e-13 Score=96.86 Aligned_cols=54 Identities=28% Similarity=0.449 Sum_probs=28.1
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHH
Q 010517 17 KDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLI 71 (508)
Q Consensus 17 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll 71 (508)
|.|+||+|++.|+.+++++|+++|+|+|.+|.+|.||||+|+.. |+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~-g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKN-GNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHT-T-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-cCHHHHHHHC
Confidence 44556666666666666666655555555555566666666654 5556655554
No 87
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.41 E-value=4.8e-13 Score=95.69 Aligned_cols=53 Identities=40% Similarity=0.596 Sum_probs=23.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHH
Q 010517 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAI 138 (508)
Q Consensus 86 g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~L 138 (508)
|+||||+|+..|+.+++++|++.|++++.+|.+|.||||+|+..|+.+++++|
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~L 53 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFL 53 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence 34445555555555555555544444444444455555555555555554444
No 88
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.40 E-value=1.7e-12 Score=119.03 Aligned_cols=120 Identities=23% Similarity=0.221 Sum_probs=110.1
Q ss_pred CChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc-cCCCCCcHHHHHHH
Q 010517 50 GKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALV-RNDDCHTALGVARI 128 (508)
Q Consensus 50 G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~TpLh~A~~ 128 (508)
-..+|..++-+ +..+-...||+.--++|.+ |..|+|+|+.|+.+|+.++|++||+.|+|+|. ++..++||||.|+.
T Consensus 12 ~~~~Lle~i~K-ndt~~a~~LLs~vr~vn~~--D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAAL 88 (396)
T KOG1710|consen 12 PKSPLLEAIDK-NDTEAALALLSTVRQVNQR--DPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAAL 88 (396)
T ss_pred hhhHHHHHHcc-CcHHHHHHHHHHhhhhhcc--CCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHH
Confidence 46789999987 8999999999886779998 88999999999999999999999999999985 45789999999999
Q ss_pred hCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHHHHHhh
Q 010517 129 KGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVI 175 (508)
Q Consensus 129 ~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll 175 (508)
.|+.++-++|++.|+... ..|.-|+|+-. +|+.-|+.++|.++-
T Consensus 89 SGn~dvcrllldaGa~~~--~vNsvgrTAaq-mAAFVG~H~CV~iIN 132 (396)
T KOG1710|consen 89 SGNQDVCRLLLDAGARMY--LVNSVGRTAAQ-MAAFVGHHECVAIIN 132 (396)
T ss_pred cCCchHHHHHHhccCccc--cccchhhhHHH-HHHHhcchHHHHHHh
Confidence 999999999999999998 88999999999 999999999998653
No 89
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.37 E-value=2.1e-12 Score=127.24 Aligned_cols=121 Identities=17% Similarity=0.108 Sum_probs=104.8
Q ss_pred HHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHH
Q 010517 54 LIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHIN 133 (508)
Q Consensus 54 Lh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~ 133 (508)
|.-|+.. |.+++|+.++..--|+..- +..|.||||-|+..||.+||++||++|+++|..|.+|+||||.|+..+++.
T Consensus 554 LLDaaLe-GEldlVq~~i~ev~DpSqp--NdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~ 630 (752)
T KOG0515|consen 554 LLDAALE-GELDLVQRIIYEVTDPSQP--NDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVP 630 (752)
T ss_pred HHhhhhc-chHHHHHHHHHhhcCCCCC--CccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchH
Confidence 4446666 9999999999987788766 889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcccccccccCCCCHHHHHH--hhcCCHHHHHHhhhCCC
Q 010517 134 VVRAIESHICYFCGWLREFYGPSFLEALA--PQLMSRKIWVVVIPCGT 179 (508)
Q Consensus 134 ~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A--~~~~~~~i~~~Ll~~g~ 179 (508)
+++.|++.|+-+.. ..-.++.|+.. -+ -+.|+..|..||..-..
T Consensus 631 ~ckqLVe~GaavfA-sTlSDmeTa~e-KCee~eeGY~~CsqyL~~vqe 676 (752)
T KOG0515|consen 631 MCKQLVESGAAVFA-STLSDMETAAE-KCEEMEEGYDQCSQYLYGVQE 676 (752)
T ss_pred HHHHHHhccceEEe-eecccccchhh-hcchhhhhHHHHHHHHHHHHH
Confidence 99999999987763 55567889988 44 35788899999865433
No 90
>PF13920 zf-C3HC4_3: Zinc finger, C3HC4 type (RING finger); PDB: 2YHN_B 2YHO_G 3T6P_A 2CSY_A 2VJE_B 2VJF_B 2HDP_B 2EA5_A 2ECG_A 3EB5_A ....
Probab=99.29 E-value=1.7e-12 Score=90.87 Aligned_cols=49 Identities=37% Similarity=0.956 Sum_probs=42.6
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccce
Q 010517 454 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQV 502 (508)
Q Consensus 454 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~ 502 (508)
+..|.||++...+++++||||.++|..|+.++...+..||+||++|.++
T Consensus 2 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~V 50 (50)
T PF13920_consen 2 DEECPICFENPRDVVLLPCGHLCFCEECAERLLKRKKKCPICRQPIESV 50 (50)
T ss_dssp HSB-TTTSSSBSSEEEETTCEEEEEHHHHHHHHHTTSBBTTTTBB-SEE
T ss_pred cCCCccCCccCCceEEeCCCChHHHHHHhHHhcccCCCCCcCChhhcCC
Confidence 3689999999999999999999559999999988778999999999864
No 91
>KOG4275 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=4.8e-12 Score=115.86 Aligned_cols=51 Identities=37% Similarity=0.959 Sum_probs=48.9
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEeeeC
Q 010517 454 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYTV 508 (508)
Q Consensus 454 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~i~i~~~ 508 (508)
...|.||||.+++.+|++|||++.|..|.++|.. ||+||+.|.++++||+|
T Consensus 300 ~~LC~ICmDaP~DCvfLeCGHmVtCt~CGkrm~e----CPICRqyi~rvvrif~~ 350 (350)
T KOG4275|consen 300 RRLCAICMDAPRDCVFLECGHMVTCTKCGKRMNE----CPICRQYIVRVVRIFRV 350 (350)
T ss_pred HHHHHHHhcCCcceEEeecCcEEeehhhcccccc----CchHHHHHHHHHhhhcC
Confidence 6799999999999999999999999999999985 99999999999999986
No 92
>KOG4265 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=99.11 E-value=2.9e-11 Score=115.30 Aligned_cols=56 Identities=29% Similarity=0.866 Sum_probs=51.6
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEeee
Q 010517 452 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYT 507 (508)
Q Consensus 452 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~i~i~~ 507 (508)
++..+|+|||...++++++||+|.+.|..|++.+.-+...||+||++|...+.||.
T Consensus 288 ~~gkeCVIClse~rdt~vLPCRHLCLCs~Ca~~Lr~q~n~CPICRqpi~~ll~i~~ 343 (349)
T KOG4265|consen 288 ESGKECVICLSESRDTVVLPCRHLCLCSGCAKSLRYQTNNCPICRQPIEELLEIYV 343 (349)
T ss_pred cCCCeeEEEecCCcceEEecchhhehhHhHHHHHHHhhcCCCccccchHhhheecc
Confidence 44579999999999999999999999999999999777789999999999998874
No 93
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.97 E-value=6e-10 Score=108.90 Aligned_cols=89 Identities=28% Similarity=0.325 Sum_probs=49.4
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHc-CCCCcccCCCCCCCcHHHHHH
Q 010517 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIEL-GANINAYRPGGRGGTPLHHAA 94 (508)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~-ga~~n~~~~d~~g~tpLh~A~ 94 (508)
++...+++|++.|++..++.+.-.|.|++.+|.+.+|+||+||.. |+++++++|++. +.+++.+ |.+|+|||.-|.
T Consensus 505 ~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaE-G~v~v~kfl~~~~kv~~~~k--DRw~rtPlDdA~ 581 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAE-GHVEVVKFLLNACKVDPDPK--DRWGRTPLDDAK 581 (622)
T ss_pred cchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeeccc-CceeHHHHHHHHHcCCCChh--hccCCCcchHhH
Confidence 344555555555555555555555555555555555555555554 555555555544 4455554 555555555555
Q ss_pred HcCCHHHHHHHHH
Q 010517 95 KRGLEPTVRLLLS 107 (508)
Q Consensus 95 ~~g~~~~v~~Ll~ 107 (508)
..+|.+++++|-+
T Consensus 582 ~F~h~~v~k~L~~ 594 (622)
T KOG0506|consen 582 HFKHKEVVKLLEE 594 (622)
T ss_pred hcCcHHHHHHHHH
Confidence 5555555555544
No 94
>KOG0320 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.95 E-value=1.3e-09 Score=93.46 Aligned_cols=51 Identities=35% Similarity=0.876 Sum_probs=44.2
Q ss_pred cccccccccCCceE--EeCCCCchhhHHhHHHHhccCCcccccccccc--ceeEee
Q 010517 455 SSCVICWEAPVEGA--CVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN--QVIRLY 506 (508)
Q Consensus 455 ~~C~iC~~~~~~~~--~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~--~~i~i~ 506 (508)
..|+|||+.....+ ...|||.| |..|++...+...+||+||+.|. ++++||
T Consensus 132 ~~CPiCl~~~sek~~vsTkCGHvF-C~~Cik~alk~~~~CP~C~kkIt~k~~~rI~ 186 (187)
T KOG0320|consen 132 YKCPICLDSVSEKVPVSTKCGHVF-CSQCIKDALKNTNKCPTCRKKITHKQFHRIY 186 (187)
T ss_pred cCCCceecchhhccccccccchhH-HHHHHHHHHHhCCCCCCcccccchhhheecc
Confidence 69999999865444 46999999 99999999887789999999886 588887
No 95
>KOG0823 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.93 E-value=7.7e-10 Score=99.37 Aligned_cols=56 Identities=32% Similarity=0.820 Sum_probs=49.2
Q ss_pred CCCCccccccccccCCceEEeCCCCchhhHHhHHHHhcc---CCcccccccccc--ceeEee
Q 010517 450 DDGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK---KGDCPVCRTKIN--QVIRLY 506 (508)
Q Consensus 450 ~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~---~~~CP~Cr~~i~--~~i~i~ 506 (508)
.++....|.||+|..+++|+..|||.| |+.|+.+|... ++.||+|+..|. ++|.||
T Consensus 43 ~~~~~FdCNICLd~akdPVvTlCGHLF-CWpClyqWl~~~~~~~~cPVCK~~Vs~~~vvPlY 103 (230)
T KOG0823|consen 43 RDGGFFDCNICLDLAKDPVVTLCGHLF-CWPCLYQWLQTRPNSKECPVCKAEVSIDTVVPLY 103 (230)
T ss_pred CCCCceeeeeeccccCCCEEeecccce-ehHHHHHHHhhcCCCeeCCccccccccceEEeee
Confidence 355667999999999999999999999 99999999875 346999999986 688988
No 96
>PLN03208 E3 ubiquitin-protein ligase RMA2; Provisional
Probab=98.92 E-value=1.2e-09 Score=96.49 Aligned_cols=54 Identities=26% Similarity=0.796 Sum_probs=45.8
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhcc----------------CCcccccccccc--ceeEee
Q 010517 452 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK----------------KGDCPVCRTKIN--QVIRLY 506 (508)
Q Consensus 452 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~----------------~~~CP~Cr~~i~--~~i~i~ 506 (508)
+++..|+||++...+++..+|||.| |+.|+..|... ...||+||.+|. +.++||
T Consensus 16 ~~~~~CpICld~~~dPVvT~CGH~F-C~~CI~~wl~~s~~s~~~~~~~~~~k~~~~CPvCR~~Is~~~LvPiy 87 (193)
T PLN03208 16 GGDFDCNICLDQVRDPVVTLCGHLF-CWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDVSEATLVPIY 87 (193)
T ss_pred CCccCCccCCCcCCCcEEcCCCchh-HHHHHHHHHHhccccccccccccccCCCCcCCCCCCcCChhcEEEee
Confidence 3557999999999999999999999 99999988531 247999999996 477776
No 97
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.92 E-value=4.9e-09 Score=103.09 Aligned_cols=100 Identities=29% Similarity=0.381 Sum_probs=87.7
Q ss_pred CCccCCCCChH------HHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccC
Q 010517 43 LEWMDKEGKTP------LIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRN 116 (508)
Q Consensus 43 ~~~~d~~G~Tp------Lh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d 116 (508)
+-.+|.+|.|+ ||-.++. |+.++.--||..|+++|..++ ..|.||||.|++.|+...+++|+-+|||++..|
T Consensus 120 ~~~rDdD~~~~~~LsrQLhasvRt-~nlet~LRll~lGA~~N~~hp-ekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d 197 (669)
T KOG0818|consen 120 LPCRDDDSVTAKDLSKQLHSSVRT-GNLETCLRLLSLGAQANFFHP-EKGNTPLHVAAKAGQILQAELLAVYGADPGAQD 197 (669)
T ss_pred CCCCCcchhhHHHHHHHHHHHhhc-ccHHHHHHHHHcccccCCCCc-ccCCchhHHHHhccchhhhhHHhhccCCCCCCC
Confidence 34567777765 7777775 999999999999999999974 689999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCc
Q 010517 117 DDCHTALGVARIKGHINVVRAIESHICY 144 (508)
Q Consensus 117 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~ 144 (508)
.+|.||+.||-..||-++.+.|++...+
T Consensus 198 ~~GmtP~~~AR~~gH~~laeRl~e~~y~ 225 (669)
T KOG0818|consen 198 SSGMTPVDYARQGGHHELAERLVEIQYE 225 (669)
T ss_pred CCCCcHHHHHHhcCchHHHHHHHHHHHH
Confidence 9999999999999999999888876433
No 98
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.91 E-value=7e-10 Score=114.98 Aligned_cols=94 Identities=20% Similarity=0.252 Sum_probs=82.2
Q ss_pred HHHHH-HcCCC-CCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q 010517 33 IRALR-SQGAS-LEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGA 110 (508)
Q Consensus 33 v~~Ll-~~g~~-~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga 110 (508)
++-.+ +.+.+ .|.+|..|+|+||+|+.. +..+++++||++|++++.+| -..|+||||-|+.+|+.+++-+||.+|+
T Consensus 33 lk~F~~k~c~n~anikD~~GR~alH~~~S~-~k~~~l~wLlqhGidv~vqD-~ESG~taLHRaiyyG~idca~lLL~~g~ 110 (1267)
T KOG0783|consen 33 LKGFSEKSCQNLANIKDRYGRTALHIAVSE-NKNSFLRWLLQHGIDVFVQD-EESGYTALHRAIYYGNIDCASLLLSKGR 110 (1267)
T ss_pred HHHHHHHhhhhhhhHHHhhccceeeeeecc-chhHHHHHHHhcCceeeecc-ccccchHhhHhhhhchHHHHHHHHhcCC
Confidence 44333 34433 577899999999999987 99999999999999999996 5789999999999999999999999999
Q ss_pred CccccCCCCCcHHHHHHH
Q 010517 111 NALVRNDDCHTALGVARI 128 (508)
Q Consensus 111 ~~~~~d~~g~TpLh~A~~ 128 (508)
.+..+|++|..||..-++
T Consensus 111 SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 111 SLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred ceEEecccCCCHHHHHhh
Confidence 999999999999988776
No 99
>KOG0317 consensus Predicted E3 ubiquitin ligase, integral peroxisomal membrane protein [Posttranslational modification, protein turnover, chaperones]
Probab=98.86 E-value=1.6e-09 Score=100.27 Aligned_cols=47 Identities=36% Similarity=0.959 Sum_probs=44.0
Q ss_pred CccccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010517 453 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 500 (508)
Q Consensus 453 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~ 500 (508)
....|.+|+|...++...||||.| |++|+..|...+..||+||+++.
T Consensus 238 a~~kC~LCLe~~~~pSaTpCGHiF-CWsCI~~w~~ek~eCPlCR~~~~ 284 (293)
T KOG0317|consen 238 ATRKCSLCLENRSNPSATPCGHIF-CWSCILEWCSEKAECPLCREKFQ 284 (293)
T ss_pred CCCceEEEecCCCCCCcCcCcchH-HHHHHHHHHccccCCCcccccCC
Confidence 336999999999999999999999 99999999998889999999986
No 100
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.84 E-value=1.2e-08 Score=101.63 Aligned_cols=119 Identities=21% Similarity=0.259 Sum_probs=102.4
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCC--CcccCCCCCCCcHHHHHHHcCC
Q 010517 21 LYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGAN--INAYRPGGRGGTPLHHAAKRGL 98 (508)
Q Consensus 21 L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~--~n~~~~d~~g~tpLh~A~~~g~ 98 (508)
|..|+..+++--+..+-..|.++-.++.+..|.||||+.. |+-++|++||.+|.. ++.. |..|.|+||.|+..++
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~t-g~~eivkyildh~p~elld~~--de~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKT-GNGEIVKYILDHGPSELLDMA--DETGETALHKAACQRN 946 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhc-CChHHHHHHHhcCCHHHHHHH--hhhhhHHHHHHHHhcc
Confidence 6677778887777777778888888899999999999987 999999999999865 4555 7889999999999999
Q ss_pred HHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcC
Q 010517 99 EPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHI 142 (508)
Q Consensus 99 ~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g 142 (508)
..+.++|++.|+.+...|..|.||-.-|-+.|..++..+|..+.
T Consensus 947 r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~rq 990 (1004)
T KOG0782|consen 947 RAVCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESRQ 990 (1004)
T ss_pred hHHHHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhhh
Confidence 99999999999999999999999999999999999998887653
No 101
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.82 E-value=1.5e-08 Score=99.68 Aligned_cols=93 Identities=28% Similarity=0.324 Sum_probs=84.6
Q ss_pred ccCCchH------HHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCC
Q 010517 13 QRQSKDE------LLYQWVIAGDVDAIRALRSQGASLEWMDK-EGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (508)
Q Consensus 13 ~~~~g~t------~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~-~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~ 85 (508)
+|.+|.+ -||-.++.|+.+..-.||..|+++|..+. .|.||||.|++. |...-+++|+-+|+|++.. |..
T Consensus 123 rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~-Gq~~Q~ElL~vYGAD~~a~--d~~ 199 (669)
T KOG0818|consen 123 RDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKA-GQILQAELLAVYGADPGAQ--DSS 199 (669)
T ss_pred CCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhc-cchhhhhHHhhccCCCCCC--CCC
Confidence 4555544 59999999999999999999999999986 699999999998 9999999999999999998 899
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHC
Q 010517 86 GGTPLHHAAKRGLEPTVRLLLSC 108 (508)
Q Consensus 86 g~tpLh~A~~~g~~~~v~~Ll~~ 108 (508)
|+||+.||-..||-++.+.|++.
T Consensus 200 GmtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 200 GMTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred CCcHHHHHHhcCchHHHHHHHHH
Confidence 99999999999999999888864
No 102
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.80 E-value=2.7e-09 Score=110.79 Aligned_cols=83 Identities=22% Similarity=0.213 Sum_probs=78.6
Q ss_pred cccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCc
Q 010517 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDK-EGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGT 88 (508)
Q Consensus 10 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~-~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~t 88 (508)
.|.+|..|+|+||+|+..|..+++++||++|+|++.+|. .|+||||-|+.. |+++++-+||++|+.+.++ |+.|..
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyy-G~idca~lLL~~g~SL~i~--Dkegls 121 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYY-GNIDCASLLLSKGRSLRIK--DKEGLS 121 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhh-chHHHHHHHHhcCCceEEe--cccCCC
Confidence 567899999999999999999999999999999999997 699999999998 9999999999999999999 899999
Q ss_pred HHHHHHH
Q 010517 89 PLHHAAK 95 (508)
Q Consensus 89 pLh~A~~ 95 (508)
||..-++
T Consensus 122 plq~~~r 128 (1267)
T KOG0783|consen 122 PLQFLSR 128 (1267)
T ss_pred HHHHHhh
Confidence 9988776
No 103
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.77 E-value=1.9e-08 Score=100.85 Aligned_cols=89 Identities=27% Similarity=0.377 Sum_probs=57.7
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCC--CC--ccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHH
Q 010517 20 LLYQWVIAGDVDAIRALRSQGAS--LE--WMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK 95 (508)
Q Consensus 20 ~L~~Aa~~g~~~~v~~Ll~~g~~--~~--~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~ 95 (508)
-|..|+...++..+-+||.+|.. +| .-+.+|+|+||+||.. |++.+.++|+-+|+|+-.+ |.+|+|+|.||-.
T Consensus 627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~-gnVvl~QLLiWyg~dv~~r--da~g~t~l~yar~ 703 (749)
T KOG0705|consen 627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARK-GNVVLAQLLIWYGVDVMAR--DAHGRTALFYARQ 703 (749)
T ss_pred HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhh-cchhHHHHHHHhCccceec--ccCCchhhhhHhh
Confidence 35556666666666667766643 22 2345566777777766 6777777777777776666 6677777777777
Q ss_pred cCCHHHHHHHHHCCCC
Q 010517 96 RGLEPTVRLLLSCGAN 111 (508)
Q Consensus 96 ~g~~~~v~~Ll~~ga~ 111 (508)
.|.-+++..||.+|+.
T Consensus 704 a~sqec~d~llq~gcp 719 (749)
T KOG0705|consen 704 AGSQECIDVLLQYGCP 719 (749)
T ss_pred cccHHHHHHHHHcCCC
Confidence 7777777777776653
No 104
>PF13923 zf-C3HC4_2: Zinc finger, C3HC4 type (RING finger); PDB: 3HCU_A 2ECI_A 2JMD_A 3HCS_B 3HCT_A 3ZTG_A 2YUR_A 3L11_A.
Probab=98.76 E-value=4.3e-09 Score=69.30 Aligned_cols=38 Identities=37% Similarity=0.983 Sum_probs=33.2
Q ss_pred cccccccCCce-EEeCCCCchhhHHhHHHHhccCCccccc
Q 010517 457 CVICWEAPVEG-ACVPCGHMAGCMSCLSEIKAKKGDCPVC 495 (508)
Q Consensus 457 C~iC~~~~~~~-~~~pCgH~~~C~~C~~~~~~~~~~CP~C 495 (508)
|+||++...++ ++++|||.| |++|+.++...+.+||+|
T Consensus 1 C~iC~~~~~~~~~~~~CGH~f-C~~C~~~~~~~~~~CP~C 39 (39)
T PF13923_consen 1 CPICLDELRDPVVVTPCGHSF-CKECIEKYLEKNPKCPVC 39 (39)
T ss_dssp ETTTTSB-SSEEEECTTSEEE-EHHHHHHHHHCTSB-TTT
T ss_pred CCCCCCcccCcCEECCCCCch-hHHHHHHHHHCcCCCcCC
Confidence 89999999999 688999999 999999988878899998
No 105
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.76 E-value=8.2e-09 Score=101.12 Aligned_cols=93 Identities=20% Similarity=0.231 Sum_probs=75.9
Q ss_pred CCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCccccCCCCCcHHHHH
Q 010517 48 KEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSC-GANALVRNDDCHTALGVA 126 (508)
Q Consensus 48 ~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~TpLh~A 126 (508)
.++...+++|++. |.+..++.+.-.|.|++.+ |.+.+|+||.||..|+.+++++||+. +.+++.+|..|+|||.-|
T Consensus 504 ~~~~i~~~~aa~~-GD~~alrRf~l~g~D~~~~--DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA 580 (622)
T KOG0506|consen 504 NDTVINVMYAAKN-GDLSALRRFALQGMDLETK--DYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDA 580 (622)
T ss_pred ccchhhhhhhhhc-CCHHHHHHHHHhccccccc--ccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHh
Confidence 4567788888886 8888888888888888887 77778888888888888888888865 678888888888888888
Q ss_pred HHhCCHHHHHHHHHcCC
Q 010517 127 RIKGHINVVRAIESHIC 143 (508)
Q Consensus 127 ~~~g~~~~v~~Ll~~ga 143 (508)
...+|.+++++|.+...
T Consensus 581 ~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 581 KHFKHKEVVKLLEEAQY 597 (622)
T ss_pred HhcCcHHHHHHHHHHhc
Confidence 88888888888876644
No 106
>KOG1571 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.74 E-value=2.3e-09 Score=102.48 Aligned_cols=53 Identities=36% Similarity=0.898 Sum_probs=48.3
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEeeeC
Q 010517 452 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYTV 508 (508)
Q Consensus 452 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~i~i~~~ 508 (508)
.....|+||++.+.+.+|+||||+++|..|...+.+ ||+||+.|...+++|++
T Consensus 303 ~~p~lcVVcl~e~~~~~fvpcGh~ccct~cs~~l~~----CPvCR~rI~~~~k~y~~ 355 (355)
T KOG1571|consen 303 PQPDLCVVCLDEPKSAVFVPCGHVCCCTLCSKHLPQ----CPVCRQRIRLVRKRYRS 355 (355)
T ss_pred CCCCceEEecCCccceeeecCCcEEEchHHHhhCCC----CchhHHHHHHHHHHhcC
Confidence 344799999999999999999999999999998876 99999999999999874
No 107
>PF13639 zf-RING_2: Ring finger domain; PDB: 2KIZ_A 4EPO_C 1IYM_A 2EP4_A 2ECT_A 2JRJ_A 2ECN_A 2ECM_A 3NG2_A 2EA6_A ....
Probab=98.74 E-value=4.6e-09 Score=71.28 Aligned_cols=40 Identities=40% Similarity=0.888 Sum_probs=35.4
Q ss_pred ccccccccC---CceEEeCCCCchhhHHhHHHHhccCCcccccc
Q 010517 456 SCVICWEAP---VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCR 496 (508)
Q Consensus 456 ~C~iC~~~~---~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr 496 (508)
.|+||++.. ..++.++|||.| |..|+..|.+.+..||+||
T Consensus 2 ~C~IC~~~~~~~~~~~~l~C~H~f-h~~Ci~~~~~~~~~CP~CR 44 (44)
T PF13639_consen 2 ECPICLEEFEDGEKVVKLPCGHVF-HRSCIKEWLKRNNSCPVCR 44 (44)
T ss_dssp CETTTTCBHHTTSCEEEETTSEEE-EHHHHHHHHHHSSB-TTTH
T ss_pred CCcCCChhhcCCCeEEEccCCCee-CHHHHHHHHHhCCcCCccC
Confidence 699999985 577788999999 9999999998888999998
No 108
>PHA02929 N1R/p28-like protein; Provisional
Probab=98.72 E-value=9.2e-09 Score=95.26 Aligned_cols=51 Identities=37% Similarity=0.840 Sum_probs=43.3
Q ss_pred ccccccccccCCc--------eEEeCCCCchhhHHhHHHHhccCCccccccccccceeEe
Q 010517 454 SSSCVICWEAPVE--------GACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRL 505 (508)
Q Consensus 454 ~~~C~iC~~~~~~--------~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~i~i 505 (508)
+.+|+||++...+ .+..+|+|.| |..|+..|...+..||+||.++..+++-
T Consensus 174 ~~eC~ICle~~~~~~~~~~~~~vl~~C~H~F-C~~CI~~Wl~~~~tCPlCR~~~~~v~~~ 232 (238)
T PHA02929 174 DKECAICMEKVYDKEIKNMYFGILSNCNHVF-CIECIDIWKKEKNTCPVCRTPFISVIKS 232 (238)
T ss_pred CCCCccCCcccccCccccccceecCCCCCcc-cHHHHHHHHhcCCCCCCCCCEeeEEeee
Confidence 3699999997543 3566899999 9999999988888999999999987765
No 109
>PF15227 zf-C3HC4_4: zinc finger of C3HC4-type, RING; PDB: 2EGP_A 2ECV_A 2ECJ_A 2YSL_A 2YSJ_A.
Probab=98.66 E-value=1.4e-08 Score=67.59 Aligned_cols=38 Identities=37% Similarity=0.905 Sum_probs=30.7
Q ss_pred cccccccCCceEEeCCCCchhhHHhHHHHhccC----Cccccc
Q 010517 457 CVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK----GDCPVC 495 (508)
Q Consensus 457 C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~----~~CP~C 495 (508)
|+||++.+.+++.++|||.| |..|+.++++.. ..||.|
T Consensus 1 CpiC~~~~~~Pv~l~CGH~F-C~~Cl~~~~~~~~~~~~~CP~C 42 (42)
T PF15227_consen 1 CPICLDLFKDPVSLPCGHSF-CRSCLERLWKEPSGSGFSCPEC 42 (42)
T ss_dssp ETTTTSB-SSEEE-SSSSEE-EHHHHHHHHCCSSSST---SSS
T ss_pred CCccchhhCCccccCCcCHH-HHHHHHHHHHccCCcCCCCcCC
Confidence 89999999999999999999 999999998763 259987
No 110
>PF13606 Ank_3: Ankyrin repeat
Probab=98.65 E-value=3.4e-08 Score=60.68 Aligned_cols=27 Identities=44% Similarity=0.748 Sum_probs=11.4
Q ss_pred CChHHHHHHHhCCCHHHHHHHHHcCCCC
Q 010517 50 GKTPLIVACMDSGLINVAKTLIELGANI 77 (508)
Q Consensus 50 G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~ 77 (508)
|+||||+||.. |+.++|++|+++|+|+
T Consensus 2 G~T~Lh~A~~~-g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 2 GNTPLHLAASN-GNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCHHHHHHHh-CCHHHHHHHHHcCCCC
Confidence 34444444443 4444444444444443
No 111
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.64 E-value=4.5e-08 Score=61.88 Aligned_cols=30 Identities=43% Similarity=0.610 Sum_probs=14.2
Q ss_pred CChHHHHHHHhCCCHHHHHHHHHcCCCCccc
Q 010517 50 GKTPLIVACMDSGLINVAKTLIELGANINAY 80 (508)
Q Consensus 50 G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~ 80 (508)
|.||||+|+.+ |+.+++++|+++|++++.+
T Consensus 2 G~TpLh~A~~~-~~~~~v~~Ll~~ga~~~~~ 31 (33)
T PF00023_consen 2 GNTPLHYAAQR-GHPDIVKLLLKHGADINAR 31 (33)
T ss_dssp SBBHHHHHHHT-TCHHHHHHHHHTTSCTTCB
T ss_pred cccHHHHHHHH-HHHHHHHHHHHCcCCCCCC
Confidence 44444444444 4444444444444444443
No 112
>PF13606 Ank_3: Ankyrin repeat
Probab=98.63 E-value=3.7e-08 Score=60.50 Aligned_cols=30 Identities=17% Similarity=0.262 Sum_probs=28.2
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCCc
Q 010517 16 SKDELLYQWVIAGDVDAIRALRSQGASLEW 45 (508)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~ 45 (508)
+|+||||+|+..|+.++|++||++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 589999999999999999999999999874
No 113
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.62 E-value=4.7e-08 Score=61.82 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=31.1
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCCccCC
Q 010517 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDK 48 (508)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~ 48 (508)
+|.||||+|+..|+.+++++||++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 589999999999999999999999999998874
No 114
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.59 E-value=1.7e-07 Score=93.73 Aligned_cols=118 Identities=18% Similarity=0.104 Sum_probs=102.1
Q ss_pred HHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC--ccccCCCCCcHHHHHHHhCC
Q 010517 54 LIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGAN--ALVRNDDCHTALGVARIKGH 131 (508)
Q Consensus 54 Lh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~--~~~~d~~g~TpLh~A~~~g~ 131 (508)
|..|+.. +.+--++.+...|.++-.+ +.+..+-||||+..|+-++|++||++|-. ++..|..|.|+||-|+..++
T Consensus 870 il~av~~-~D~~klqE~h~~gg~ll~~--~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 870 ILRAVLS-SDLMKLQETHLNGGSLLIQ--GPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRN 946 (1004)
T ss_pred HHHHHHh-ccHHHHHHHHhcCCceEee--CcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcc
Confidence 4455555 5555566667778888888 77888999999999999999999999853 56778999999999999999
Q ss_pred HHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHHHHHhhhC
Q 010517 132 INVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPC 177 (508)
Q Consensus 132 ~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~ 177 (508)
..+..+|++.|+.+. ..|..|.||-. -|-+.|..+++.+|-..
T Consensus 947 r~vc~~lvdagasl~--ktd~kg~tp~e-raqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 947 RAVCQLLVDAGASLR--KTDSKGKTPQE-RAQQAGDPDLAAYLESR 989 (1004)
T ss_pred hHHHHHHHhcchhhe--ecccCCCChHH-HHHhcCCchHHHHHhhh
Confidence 999999999999998 89999999999 99999999999988654
No 115
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.59 E-value=2e-07 Score=98.43 Aligned_cols=123 Identities=16% Similarity=0.096 Sum_probs=103.5
Q ss_pred cCCchHHHHHHHHcCCHHHHHHHHHcC----CCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcH
Q 010517 14 RQSKDELLYQWVIAGDVDAIRALRSQG----ASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTP 89 (508)
Q Consensus 14 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g----~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tp 89 (508)
...+.-....|++.|+...|+.+++.. .++|.+|.-|+++|++|..+ .+.|++++|++++... . .+
T Consensus 22 l~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~n-enle~~eLLl~~~~~~--g-------dA 91 (822)
T KOG3609|consen 22 LNEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDN-ENLELQELLLDTSSEE--G-------DA 91 (822)
T ss_pred cchhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceeccccc-ccHHHHHHHhcCcccc--c-------hH
Confidence 445667788999999999999999843 46889999999999999987 9999999999997555 2 48
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCc----------cccCCCCCcHHHHHHHhCCHHHHHHHHHcCCccc
Q 010517 90 LHHAAKRGLEPTVRLLLSCGANA----------LVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (508)
Q Consensus 90 Lh~A~~~g~~~~v~~Ll~~ga~~----------~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~ 146 (508)
|.+|+..|..++|++++.+-... ...-..+-|||.+|+..+|.||+++|+.+|+.+.
T Consensus 92 LL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 92 LLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred HHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 99999999999999999874322 1223467899999999999999999999998875
No 116
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.57 E-value=1.4e-07 Score=94.34 Aligned_cols=127 Identities=20% Similarity=0.209 Sum_probs=88.0
Q ss_pred HHHHHHHcCCHHHHHHHHH--cCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcC
Q 010517 20 LLYQWVIAGDVDAIRALRS--QGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRG 97 (508)
Q Consensus 20 ~L~~Aa~~g~~~~v~~Ll~--~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g 97 (508)
+||+++...+.+-+..++. ....++.+|..|.||||+|+.. |+.+.++.|+..|+++..+ |+.||+|||.|+..|
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~L-g~~~~a~~Ll~a~Adv~~k--N~~gWs~L~EAv~~g 99 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRL-GHVEAARILLSAGADVSIK--NNEGWSPLHEAVSTG 99 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHh-cCHHHHHHHHhcCCCcccc--ccccccHHHHHHHcC
Confidence 4888888877766665443 3346788888899999999987 8899999999999988888 888999999999999
Q ss_pred CHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHH
Q 010517 98 LEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLE 159 (508)
Q Consensus 98 ~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~ 159 (508)
+.+++..+|.+--. + + -.-...+...+++.|.+.+-.+....-+...+-||-
T Consensus 100 ~~q~i~~vlr~~~~---q-----~--~~~~~~~~p~ll~~l~~~~DFYmE~~wdF~SWvPlv 151 (560)
T KOG0522|consen 100 NEQIITEVLRHLKY---Q-----A--WEKWERRLPRLLAKLSEMPDFYMEMKWDFQSWIPLL 151 (560)
T ss_pred CHHHHHHHHHHhHH---H-----H--HHHHHhcchHHHHHHHhCccceEEEEecceeehhhh
Confidence 88887777654210 0 0 011224455666666666544443344555566665
No 117
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.55 E-value=1.8e-07 Score=93.59 Aligned_cols=89 Identities=26% Similarity=0.393 Sum_probs=74.1
Q ss_pred hHHHHHHHhCCCHHHHHHHHHc-CCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhC
Q 010517 52 TPLIVACMDSGLINVAKTLIEL-GANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKG 130 (508)
Q Consensus 52 TpLh~Aa~~~g~~~~v~~Ll~~-ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g 130 (508)
-|||+++.......+.+.|+.. +..++.+ |..|+||||+|+..|+.+.++.|+..|+++..+|+.|++|||.|+..|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~--D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g 99 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRR--DPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTG 99 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccc--cCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcC
Confidence 4599999873344455544444 4456666 889999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcC
Q 010517 131 HINVVRAIESHI 142 (508)
Q Consensus 131 ~~~~v~~Ll~~g 142 (508)
+.+++..++.+-
T Consensus 100 ~~q~i~~vlr~~ 111 (560)
T KOG0522|consen 100 NEQIITEVLRHL 111 (560)
T ss_pred CHHHHHHHHHHh
Confidence 999888887663
No 118
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.52 E-value=2.6e-07 Score=92.85 Aligned_cols=89 Identities=25% Similarity=0.185 Sum_probs=62.4
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCc----cccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhc
Q 010517 90 LHHAAKRGLEPTVRLLLSCGANA----LVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL 165 (508)
Q Consensus 90 Lh~A~~~g~~~~v~~Ll~~ga~~----~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~ 165 (508)
|.-|+...+...+-+||.+|... ..-+.+|+|+||+|++.|++.+.++|+-+|+|+. .+|..|+|+|. +|-+.
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~--~rda~g~t~l~-yar~a 704 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVM--ARDAHGRTALF-YARQA 704 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccce--ecccCCchhhh-hHhhc
Confidence 55666666666667777776432 2334566777777777777777777777777777 77777777777 77777
Q ss_pred CCHHHHHHhhhCCCCC
Q 010517 166 MSRKIWVVVIPCGTAN 181 (508)
Q Consensus 166 ~~~~i~~~Ll~~g~~~ 181 (508)
|..+++.+|+.+|...
T Consensus 705 ~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 705 GSQECIDVLLQYGCPD 720 (749)
T ss_pred ccHHHHHHHHHcCCCc
Confidence 7777777777777643
No 119
>PHA02926 zinc finger-like protein; Provisional
Probab=98.49 E-value=7.3e-08 Score=85.99 Aligned_cols=51 Identities=27% Similarity=0.800 Sum_probs=40.3
Q ss_pred CccccccccccCC---------ceEEeCCCCchhhHHhHHHHhccC------CccccccccccceeE
Q 010517 453 SSSSCVICWEAPV---------EGACVPCGHMAGCMSCLSEIKAKK------GDCPVCRTKINQVIR 504 (508)
Q Consensus 453 ~~~~C~iC~~~~~---------~~~~~pCgH~~~C~~C~~~~~~~~------~~CP~Cr~~i~~~i~ 504 (508)
.+.+|.||||... -.++.+|+|.| |..|+..|...+ ..||+||..+..+++
T Consensus 169 kE~eCgICmE~I~eK~~~~eRrFGIL~~CnHsF-Cl~CIr~Wr~~r~~~~~~rsCPiCR~~f~~I~p 234 (242)
T PHA02926 169 KEKECGICYEVVYSKRLENDRYFGLLDSCNHIF-CITCINIWHRTRRETGASDNCPICRTRFRNITM 234 (242)
T ss_pred CCCCCccCccccccccccccccccccCCCCchH-HHHHHHHHHHhccccCcCCcCCCCcceeeeecc
Confidence 4479999999732 25677999999 999999998742 359999999885543
No 120
>PF14634 zf-RING_5: zinc-RING finger domain
Probab=98.39 E-value=2.4e-07 Score=62.63 Aligned_cols=41 Identities=39% Similarity=0.972 Sum_probs=34.6
Q ss_pred ccccccccC---CceEEeCCCCchhhHHhHHHHhccCCccccccc
Q 010517 456 SCVICWEAP---VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRT 497 (508)
Q Consensus 456 ~C~iC~~~~---~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~ 497 (508)
.|.||++.. ....+++|||.| |..|+..+......||+||+
T Consensus 1 ~C~~C~~~~~~~~~~~l~~CgH~~-C~~C~~~~~~~~~~CP~C~k 44 (44)
T PF14634_consen 1 HCNICFEKYSEERRPRLTSCGHIF-CEKCLKKLKGKSVKCPICRK 44 (44)
T ss_pred CCcCcCccccCCCCeEEcccCCHH-HHHHHHhhcCCCCCCcCCCC
Confidence 489999987 467788999999 99999999844567999985
No 121
>PF00097 zf-C3HC4: Zinc finger, C3HC4 type (RING finger); InterPro: IPR018957 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C3HC4 type zinc-finger (RING finger) is a cysteine-rich domain of 40 to 60 residues that coordinates two zinc ions, and has the consensus sequence: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C where X is any amino acid []. Many proteins containing a RING finger play a key role in the ubiquitination pathway []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1CHC_A 2ECW_A 2Y43_B 1V87_A 2DJB_A 2H0D_B 3RPG_C 3KNV_A 2CKL_B 1JM7_A ....
Probab=98.38 E-value=2.1e-07 Score=62.08 Aligned_cols=38 Identities=37% Similarity=0.909 Sum_probs=34.2
Q ss_pred cccccccCCceE-EeCCCCchhhHHhHHHHhc--cCCccccc
Q 010517 457 CVICWEAPVEGA-CVPCGHMAGCMSCLSEIKA--KKGDCPVC 495 (508)
Q Consensus 457 C~iC~~~~~~~~-~~pCgH~~~C~~C~~~~~~--~~~~CP~C 495 (508)
|.||++...+.+ +++|||.| |..|+.++.. ....||+|
T Consensus 1 C~iC~~~~~~~~~~~~C~H~f-C~~C~~~~~~~~~~~~CP~C 41 (41)
T PF00097_consen 1 CPICLEPFEDPVILLPCGHSF-CRDCLRKWLENSGSVKCPLC 41 (41)
T ss_dssp ETTTSSBCSSEEEETTTSEEE-EHHHHHHHHHHTSSSBTTTT
T ss_pred CCcCCccccCCCEEecCCCcc-hHHHHHHHHHhcCCccCCcC
Confidence 899999999999 88999999 9999999888 34579988
No 122
>cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H)
Probab=98.37 E-value=2.6e-07 Score=62.76 Aligned_cols=43 Identities=44% Similarity=0.990 Sum_probs=35.4
Q ss_pred ccccccccCCceEEe-CCCCchhhHHhHHHHhcc-CCccccccccc
Q 010517 456 SCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAK-KGDCPVCRTKI 499 (508)
Q Consensus 456 ~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~-~~~CP~Cr~~i 499 (508)
.|.||++.....+.+ +|||.| |..|+..+... +..||+||..+
T Consensus 1 ~C~iC~~~~~~~~~~~~C~H~~-c~~C~~~~~~~~~~~Cp~C~~~~ 45 (45)
T cd00162 1 ECPICLEEFREPVVLLPCGHVF-CRSCIDKWLKSGKNTCPLCRTPI 45 (45)
T ss_pred CCCcCchhhhCceEecCCCChh-cHHHHHHHHHhCcCCCCCCCCcC
Confidence 499999998555555 599999 99999998876 66899999764
No 123
>smart00504 Ubox Modified RING finger domain. Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination.
Probab=98.30 E-value=5e-07 Score=66.60 Aligned_cols=45 Identities=18% Similarity=0.249 Sum_probs=41.6
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010517 455 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~ 500 (508)
..|+||.+...+++..+|||.| |..|+..+...+..||+|+.++.
T Consensus 2 ~~Cpi~~~~~~~Pv~~~~G~v~-~~~~i~~~~~~~~~cP~~~~~~~ 46 (63)
T smart00504 2 FLCPISLEVMKDPVILPSGQTY-ERRAIEKWLLSHGTDPVTGQPLT 46 (63)
T ss_pred cCCcCCCCcCCCCEECCCCCEE-eHHHHHHHHHHCCCCCCCcCCCC
Confidence 4799999999999999999999 99999999877778999999984
No 124
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.29 E-value=8.1e-07 Score=96.50 Aligned_cols=100 Identities=22% Similarity=0.125 Sum_probs=70.0
Q ss_pred HcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccc
Q 010517 72 ELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLRE 151 (508)
Q Consensus 72 ~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 151 (508)
.+++++|....-..|.|+||.|+..+..-++++|++.|+++|..|..|+||||.+...|+...+.+|+++|++.+ ..+
T Consensus 642 ~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~--a~~ 719 (785)
T KOG0521|consen 642 AHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPN--AFD 719 (785)
T ss_pred cchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhcccccccc--ccC
Confidence 444555443223456777777777777777777777777777777777777777777777777777777777777 777
Q ss_pred cCCCCHHHHHHhhcCCHHHHHHh
Q 010517 152 FYGPSFLEALAPQLMSRKIWVVV 174 (508)
Q Consensus 152 ~~g~tpL~~~A~~~~~~~i~~~L 174 (508)
.+|.++|+ +|....+.+++-+|
T Consensus 720 ~~~~~~l~-~a~~~~~~d~~~l~ 741 (785)
T KOG0521|consen 720 PDGKLPLD-IAMEAANADIVLLL 741 (785)
T ss_pred ccCcchhh-HHhhhccccHHHHH
Confidence 77777777 66555555555444
No 125
>COG5574 PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.29 E-value=3.5e-07 Score=83.84 Aligned_cols=45 Identities=44% Similarity=1.014 Sum_probs=39.3
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhc-cCC-cccccccccc
Q 010517 455 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKA-KKG-DCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~-~~~-~CP~Cr~~i~ 500 (508)
..|.||++.+..++..||||.| |..|+..++. ++. .||+||+.+.
T Consensus 216 ~kC~lC~e~~~~ps~t~CgHlF-C~~Cl~~~~t~~k~~~CplCRak~~ 262 (271)
T COG5574 216 YKCFLCLEEPEVPSCTPCGHLF-CLSCLLISWTKKKYEFCPLCRAKVY 262 (271)
T ss_pred cceeeeecccCCcccccccchh-hHHHHHHHHHhhccccCchhhhhcc
Confidence 6999999999999999999999 9999999444 444 4999999874
No 126
>TIGR00599 rad18 DNA repair protein rad18. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.26 E-value=5.3e-07 Score=89.88 Aligned_cols=49 Identities=24% Similarity=0.588 Sum_probs=43.5
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010517 452 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 501 (508)
Q Consensus 452 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~ 501 (508)
.....|.||++.+.+++.++|||.| |..|+..+......||+||..+..
T Consensus 24 e~~l~C~IC~d~~~~PvitpCgH~F-Cs~CI~~~l~~~~~CP~Cr~~~~~ 72 (397)
T TIGR00599 24 DTSLRCHICKDFFDVPVLTSCSHTF-CSLCIRRCLSNQPKCPLCRAEDQE 72 (397)
T ss_pred ccccCCCcCchhhhCccCCCCCCch-hHHHHHHHHhCCCCCCCCCCcccc
Confidence 3457999999999999999999999 999999988776789999998753
No 127
>smart00184 RING Ring finger. E3 ubiquitin-protein ligase activity is intrinsic to the RING domain of c-Cbl and is likely to be a general function of this domain; Various RING fingers exhibit binding activity towards E2 ubiquitin-conjugating enzymes (Ubc' s)
Probab=98.25 E-value=9.1e-07 Score=57.87 Aligned_cols=38 Identities=37% Similarity=0.988 Sum_probs=33.9
Q ss_pred cccccccCCceEEeCCCCchhhHHhHHHHhc-cCCccccc
Q 010517 457 CVICWEAPVEGACVPCGHMAGCMSCLSEIKA-KKGDCPVC 495 (508)
Q Consensus 457 C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~-~~~~CP~C 495 (508)
|.||++.....+.++|||.| |..|...+.. .+..||+|
T Consensus 1 C~iC~~~~~~~~~~~C~H~~-c~~C~~~~~~~~~~~CP~C 39 (39)
T smart00184 1 CPICLEELKDPVVLPCGHTF-CRSCIRKWLKSGNNTCPIC 39 (39)
T ss_pred CCcCccCCCCcEEecCCChH-HHHHHHHHHHhCcCCCCCC
Confidence 78999999999999999999 9999999876 45679987
No 128
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.25 E-value=4.3e-06 Score=73.04 Aligned_cols=70 Identities=29% Similarity=0.207 Sum_probs=58.8
Q ss_pred CCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcc
Q 010517 74 GANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCG-ANALVRNDDCHTALGVARIKGHINVVRAIESHICYF 145 (508)
Q Consensus 74 ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~ 145 (508)
+.++|.+ |..||||||.|+..|..+.+.+|+.+| +.+...|..|.+++.+|-+.|+.++++.|.+.-.+-
T Consensus 2 e~~in~r--D~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et 72 (223)
T KOG2384|consen 2 EGNINAR--DAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET 72 (223)
T ss_pred CCCccch--hhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence 4577877 888889999888888888888888888 888888888888888888888888888888775443
No 129
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.24 E-value=1.1e-06 Score=94.99 Aligned_cols=126 Identities=24% Similarity=0.167 Sum_probs=84.9
Q ss_pred cccCCchHHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCChHHHHHHHhCCCHHHHHHHH-HcCCCCcccCCCCCCCcH
Q 010517 12 QQRQSKDELLYQWVIAGDVDAIRALRSQ-GASLEWMDKEGKTPLIVACMDSGLINVAKTLI-ELGANINAYRPGGRGGTP 89 (508)
Q Consensus 12 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll-~~ga~~n~~~~d~~g~tp 89 (508)
.....|.+.||+++..++.-+++.+++- |......|.+|+..+|+++ . ++.+.+-+|+ -.|..++++ |..||||
T Consensus 569 ~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca-~-lg~ewA~ll~~~~~~ai~i~--D~~G~tp 644 (975)
T KOG0520|consen 569 SVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCA-A-LGYEWAFLPISADGVAIDIR--DRNGWTP 644 (975)
T ss_pred cCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhh-h-cCCceeEEEEeecccccccc--cCCCCcc
Confidence 4455677777777777777777777774 5555666777777777744 3 5566655554 346777777 7777777
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCc------cccCCCCCcHHHHHHHhCCHHHHHHHHHc
Q 010517 90 LHHAAKRGLEPTVRLLLSCGANA------LVRNDDCHTALGVARIKGHINVVRAIESH 141 (508)
Q Consensus 90 Lh~A~~~g~~~~v~~Ll~~ga~~------~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ 141 (508)
||+|+.+|+..++..|++.|++. ......|.|+-.+|..+|+..+..+|-+.
T Consensus 645 L~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 645 LHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred cchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 77777777777777777766543 23334577777777777777766666544
No 130
>PF13445 zf-RING_UBOX: RING-type zinc-finger; PDB: 2CT2_A.
Probab=98.20 E-value=7.5e-07 Score=59.27 Aligned_cols=30 Identities=40% Similarity=0.934 Sum_probs=21.2
Q ss_pred cccccccCCc----eEEeCCCCchhhHHhHHHHhcc
Q 010517 457 CVICWEAPVE----GACVPCGHMAGCMSCLSEIKAK 488 (508)
Q Consensus 457 C~iC~~~~~~----~~~~pCgH~~~C~~C~~~~~~~ 488 (508)
|+||.| +.+ ++.++|||.| |..|+.+|...
T Consensus 1 CpIc~e-~~~~~n~P~~L~CGH~~-c~~cl~~l~~~ 34 (43)
T PF13445_consen 1 CPICKE-FSTEENPPMVLPCGHVF-CKDCLQKLSKK 34 (43)
T ss_dssp -TTT-----TTSS-EEE-SSS-EE-EHHHHHHHHHH
T ss_pred CCcccc-ccCCCCCCEEEeCccHH-HHHHHHHHHhc
Confidence 899999 777 8899999999 99999999874
No 131
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.20 E-value=1.5e-06 Score=94.43 Aligned_cols=97 Identities=30% Similarity=0.403 Sum_probs=76.2
Q ss_pred cCCCCCccC--CCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccC
Q 010517 39 QGASLEWMD--KEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRN 116 (508)
Q Consensus 39 ~g~~~~~~d--~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d 116 (508)
+++++|..+ ..|.|+||.|+.. +...++++|+..|+++|.+ |..|+||||.+...|+...+.+|++.|++.+..+
T Consensus 643 ~~~~~n~~~~~~~~~s~lh~a~~~-~~~~~~e~ll~~ga~vn~~--d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~ 719 (785)
T KOG0521|consen 643 HGCCENWPVVLCIGCSLLHVAVGT-GDSGAVELLLQNGADVNAL--DSKGRTPLHHATASGHTSIACLLLKRGADPNAFD 719 (785)
T ss_pred chhhhccchhhhcccchhhhhhcc-chHHHHHHHHhcCCcchhh--hccCCCcchhhhhhcccchhhhhccccccccccC
Confidence 344444432 3578888888886 8888888888888888888 7888888888888888888888888888888888
Q ss_pred CCCCcHHHHHHHhCCHHHHHHH
Q 010517 117 DDCHTALGVARIKGHINVVRAI 138 (508)
Q Consensus 117 ~~g~TpLh~A~~~g~~~~v~~L 138 (508)
.+|.++|++|....+.+++-+|
T Consensus 720 ~~~~~~l~~a~~~~~~d~~~l~ 741 (785)
T KOG0521|consen 720 PDGKLPLDIAMEAANADIVLLL 741 (785)
T ss_pred ccCcchhhHHhhhccccHHHHH
Confidence 8888888888776666655544
No 132
>KOG2164 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.18 E-value=9e-07 Score=88.60 Aligned_cols=52 Identities=29% Similarity=0.768 Sum_probs=43.8
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhccC-----Cccccccccccc--eeEee
Q 010517 454 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK-----GDCPVCRTKINQ--VIRLY 506 (508)
Q Consensus 454 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~-----~~CP~Cr~~i~~--~i~i~ 506 (508)
+..|+||++.+..++.+.|||.| |..|+.+.+... +.||+||..|.- ...+|
T Consensus 186 ~~~CPICL~~~~~p~~t~CGHiF-C~~CiLqy~~~s~~~~~~~CPiC~s~I~~kdl~pv~ 244 (513)
T KOG2164|consen 186 DMQCPICLEPPSVPVRTNCGHIF-CGPCILQYWNYSAIKGPCSCPICRSTITLKDLLPVF 244 (513)
T ss_pred CCcCCcccCCCCcccccccCcee-eHHHHHHHHhhhcccCCccCCchhhhccccceeeee
Confidence 47999999999999999999999 999999987653 479999999874 44443
No 133
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.13 E-value=8.9e-06 Score=86.25 Aligned_cols=126 Identities=22% Similarity=0.177 Sum_probs=101.7
Q ss_pred CCCChHHHHHHHhCCCHHHHHHHHHcC----CCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHH
Q 010517 48 KEGKTPLIVACMDSGLINVAKTLIELG----ANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTAL 123 (508)
Q Consensus 48 ~~G~TpLh~Aa~~~g~~~~v~~Ll~~g----a~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL 123 (508)
..+.--...|+.+ |+...|+..++.. .++|.+ |.-|+++|++|+.+.+.+++++|++++..+ .-+|
T Consensus 23 ~~~e~~fL~a~E~-gd~~~V~k~l~~~~~~~lninc~--d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdAL 92 (822)
T KOG3609|consen 23 NEGEKGFLLAHEN-GDVPLVAKALEYKAVSKLNINCR--DPLGRLALHIAIDNENLELQELLLDTSSEE-------GDAL 92 (822)
T ss_pred chhhHHHHHHHHc-CChHHHHHHHHhccccccchhcc--ChHhhhceecccccccHHHHHHHhcCcccc-------chHH
Confidence 3445556788888 9999888888763 457777 789999999999999999999999987554 3489
Q ss_pred HHHHHhCCHHHHHHHHHcCCcccc--------cccccCCCCHHHHHHhhcCCHHHHHHhhhCCCCCCCC
Q 010517 124 GVARIKGHINVVRAIESHICYFCG--------WLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSK 184 (508)
Q Consensus 124 h~A~~~g~~~~v~~Ll~~ga~~~~--------~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~g~~~~~~ 184 (508)
.+|+..|.+++|++|+.+.....+ -..-..+-|||+ +|+..++.||+++|+.+|+.+...
T Consensus 93 L~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPli-LAAh~NnyEil~~Ll~kg~~i~~P 160 (822)
T KOG3609|consen 93 LLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLM-LAAHLNNFEILQCLLTRGHCIPIP 160 (822)
T ss_pred HHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHH-HHHHhcchHHHHHHHHcCCCCCCC
Confidence 999999999999999987543310 022345789999 999999999999999999987543
No 134
>PF12678 zf-rbx1: RING-H2 zinc finger; InterPro: IPR024766 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This domain constitutes a conserved region found in proteins that participate in diverse functions relevant to chromosome metabolism and cell cycle control [].The domain contains 8 cysteine/ histidine residues which are proposed to be the conserved residues involved in zinc binding.; PDB: 4A0C_D 4A0L_I 4A0K_B 2ECL_A 1LDK_C 3RTR_F 3DQV_Y 1U6G_B 1LDJ_B 2HYE_D ....
Probab=98.08 E-value=3e-06 Score=64.09 Aligned_cols=41 Identities=34% Similarity=0.853 Sum_probs=33.8
Q ss_pred cccccccccC-------------CceEEeCCCCchhhHHhHHHHhccCCcccccc
Q 010517 455 SSCVICWEAP-------------VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCR 496 (508)
Q Consensus 455 ~~C~iC~~~~-------------~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr 496 (508)
..|.||++.. ..++..+|||.| ...|+.+|...+..||+||
T Consensus 20 d~C~IC~~~l~~~~~~~~~~~~~~~i~~~~C~H~F-H~~Ci~~Wl~~~~~CP~CR 73 (73)
T PF12678_consen 20 DNCAICREPLEDPCPECQAPQDECPIVWGPCGHIF-HFHCISQWLKQNNTCPLCR 73 (73)
T ss_dssp SBETTTTSBTTSTTCCHHHCTTTS-EEEETTSEEE-EHHHHHHHHTTSSB-TTSS
T ss_pred CcccccChhhhChhhhhcCCccccceEecccCCCE-EHHHHHHHHhcCCcCCCCC
Confidence 4599999876 444566999999 9999999998888999998
No 135
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.07 E-value=9e-06 Score=71.08 Aligned_cols=65 Identities=18% Similarity=0.130 Sum_probs=39.7
Q ss_pred CcccccCCchHHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcC
Q 010517 9 NQHQQRQSKDELLYQWVIAGDVDAIRALRSQG-ASLEWMDKEGKTPLIVACMDSGLINVAKTLIELG 74 (508)
Q Consensus 9 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g-~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~g 74 (508)
++|.+|..|+|+||.|+..|..+.|.+|+.+| +.+...|..|.+++.+|-+. |+.++++.|.+.-
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~-g~~~fvh~lfe~~ 69 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKG-GAQAFVHSLFEND 69 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhc-ChHHHHHHHHHHh
Confidence 45556666666666666666666666666666 55666666666666666554 6666666665553
No 136
>KOG0287 consensus Postreplication repair protein RAD18 [Replication, recombination and repair]
Probab=98.02 E-value=2e-06 Score=81.06 Aligned_cols=46 Identities=28% Similarity=0.684 Sum_probs=42.9
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010517 455 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 501 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~ 501 (508)
..|.||.|.+..+++.||+|.| |..|+......++.||.|+.++.+
T Consensus 24 LRC~IC~eyf~ip~itpCsHtf-CSlCIR~~L~~~p~CP~C~~~~~E 69 (442)
T KOG0287|consen 24 LRCGICFEYFNIPMITPCSHTF-CSLCIRKFLSYKPQCPTCCVTVTE 69 (442)
T ss_pred HHHhHHHHHhcCceeccccchH-HHHHHHHHhccCCCCCceecccch
Confidence 6999999999999999999999 999999988888899999998863
No 137
>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones]
Probab=98.00 E-value=1.2e-06 Score=92.05 Aligned_cols=51 Identities=24% Similarity=0.621 Sum_probs=45.1
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhcc-CCcccccccccc--ceeEee
Q 010517 455 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKIN--QVIRLY 506 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~CP~Cr~~i~--~~i~i~ 506 (508)
..|++|.+++.++|...|||.| |..|+...-.. ..+||.|.++|. ++.+||
T Consensus 644 LkCs~Cn~R~Kd~vI~kC~H~F-C~~Cvq~r~etRqRKCP~Cn~aFganDv~~I~ 697 (698)
T KOG0978|consen 644 LKCSVCNTRWKDAVITKCGHVF-CEECVQTRYETRQRKCPKCNAAFGANDVHRIH 697 (698)
T ss_pred eeCCCccCchhhHHHHhcchHH-HHHHHHHHHHHhcCCCCCCCCCCCcccccccC
Confidence 5899999999999999999999 99999886554 468999999995 688887
No 138
>COG5432 RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
Probab=97.99 E-value=2.8e-06 Score=78.35 Aligned_cols=46 Identities=28% Similarity=0.547 Sum_probs=42.5
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010517 455 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 501 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~ 501 (508)
..|-||-+++..++..+|||.| |..|+.+.....+.||+||.+...
T Consensus 26 lrC~IC~~~i~ip~~TtCgHtF-CslCIR~hL~~qp~CP~Cr~~~~e 71 (391)
T COG5432 26 LRCRICDCRISIPCETTCGHTF-CSLCIRRHLGTQPFCPVCREDPCE 71 (391)
T ss_pred HHhhhhhheeecceecccccch-hHHHHHHHhcCCCCCccccccHHh
Confidence 5899999999999999999999 999999988888899999998753
No 139
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.97 E-value=1.9e-05 Score=75.96 Aligned_cols=76 Identities=30% Similarity=0.315 Sum_probs=54.5
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcC
Q 010517 18 DELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRG 97 (508)
Q Consensus 18 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g 97 (508)
.--|..|++.|+++.|+.|++.|.++|.+|....+||.+|+.. ||.++|++||+.|+--..- ..+|.- -||++.+.
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLc-GHe~vvklLLenGAiC~rd--tf~G~R-C~YgaLnd 112 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLC-GHEDVVKLLLENGAICSRD--TFDGDR-CHYGALND 112 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHc-CcHHHHHHHHHcCCccccc--ccCcch-hhhhhhhH
Confidence 4457788888888888888888888888888888888888886 8888888888888643321 234433 35655543
No 140
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.96 E-value=8.8e-06 Score=88.09 Aligned_cols=130 Identities=15% Similarity=0.019 Sum_probs=101.0
Q ss_pred CccCCCCChHHHHHHHhCCCHHHHHHHHHc-CCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcH
Q 010517 44 EWMDKEGKTPLIVACMDSGLINVAKTLIEL-GANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTA 122 (508)
Q Consensus 44 ~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~-ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~Tp 122 (508)
......|+|.||+++.. +..-+++.+++. |...+.. |.+|.--+|+++..|..-.+.+..-.|..++.+|..|+||
T Consensus 568 ~~~~~r~~lllhL~a~~-lyawLie~~~e~~~~~~~el--d~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tp 644 (975)
T KOG0520|consen 568 SSVNFRDMLLLHLLAEL-LYAWLIEKVIEWAGSGDLEL--DRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTP 644 (975)
T ss_pred ccCCCcchHHHHHHHHH-hHHHHHHHHhcccccCchhh--cccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcc
Confidence 34556789999999988 999999999987 6666666 6677777888554444434444445678899999999999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCcccc----cccccCCCCHHHHHHhhcCCHHHHHHhhhC
Q 010517 123 LGVARIKGHINVVRAIESHICYFCG----WLREFYGPSFLEALAPQLMSRKIWVVVIPC 177 (508)
Q Consensus 123 Lh~A~~~g~~~~v~~Ll~~ga~~~~----~~~~~~g~tpL~~~A~~~~~~~i~~~Ll~~ 177 (508)
||+|+.+|+..++..|++.|++... ......|.|+-. +|..+|+..+..+|-+.
T Consensus 645 L~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~-la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 645 LHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAAD-LARANGHKGIAGYLSEK 702 (975)
T ss_pred cchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhh-hhhcccccchHHHHhhh
Confidence 9999999999999999988876431 133456889999 89999999999888765
No 141
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.94 E-value=2.2e-05 Score=75.51 Aligned_cols=85 Identities=28% Similarity=0.314 Sum_probs=67.4
Q ss_pred ChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhC
Q 010517 51 KTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKG 130 (508)
Q Consensus 51 ~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g 130 (508)
.--|-+||+. |.++.|+.|++.|.++|.+ |....+||.+|+..||.++|++||++||--..-.-+|.-. ||++.+.
T Consensus 37 f~elceacR~-GD~d~v~~LVetgvnVN~v--D~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC-~YgaLnd 112 (516)
T KOG0511|consen 37 FGELCEACRA-GDVDRVRYLVETGVNVNAV--DRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC-HYGALND 112 (516)
T ss_pred hHHHHHHhhc-ccHHHHHHHHHhCCCcchh--hcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh-hhhhhhH
Confidence 4458899998 9999999999999999999 8899999999999999999999999998665444455554 5555543
Q ss_pred CHHHHHHHHHc
Q 010517 131 HINVVRAIESH 141 (508)
Q Consensus 131 ~~~~v~~Ll~~ 141 (508)
.|-++|++.
T Consensus 113 --~IR~mllsy 121 (516)
T KOG0511|consen 113 --RIRRMLLSY 121 (516)
T ss_pred --HHHHHHHHH
Confidence 334455543
No 142
>KOG1100 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.86 E-value=3.8e-06 Score=76.86 Aligned_cols=48 Identities=27% Similarity=0.665 Sum_probs=43.1
Q ss_pred ccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEeee
Q 010517 456 SCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYT 507 (508)
Q Consensus 456 ~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~i~i~~ 507 (508)
.|..|.++...++++||.|.+.|..|...+.. ||+|+.++...+.+|.
T Consensus 160 ~Cr~C~~~~~~VlllPCrHl~lC~~C~~~~~~----CPiC~~~~~s~~~v~~ 207 (207)
T KOG1100|consen 160 SCRKCGEREATVLLLPCRHLCLCGICDESLRI----CPICRSPKTSSVEVNF 207 (207)
T ss_pred cceecCcCCceEEeecccceEecccccccCcc----CCCCcChhhceeeccC
Confidence 49999999999999999999999999876544 9999999999888874
No 143
>KOG0824 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.82 E-value=7.1e-06 Score=76.63 Aligned_cols=48 Identities=29% Similarity=0.643 Sum_probs=41.6
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhcc-CCcccccccccccee
Q 010517 455 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQVI 503 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~CP~Cr~~i~~~i 503 (508)
.+|.||+....-++.++|+|.| |+.|++..... ++.|++||.+|.+.|
T Consensus 8 ~eC~IC~nt~n~Pv~l~C~HkF-CyiCiKGsy~ndk~~CavCR~pids~i 56 (324)
T KOG0824|consen 8 KECLICYNTGNCPVNLYCFHKF-CYICIKGSYKNDKKTCAVCRFPIDSTI 56 (324)
T ss_pred CcceeeeccCCcCccccccchh-hhhhhcchhhcCCCCCceecCCCCcch
Confidence 5899999999888999999999 99999885544 456999999998754
No 144
>COG5243 HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
Probab=97.80 E-value=9.4e-06 Score=77.58 Aligned_cols=46 Identities=30% Similarity=0.871 Sum_probs=38.9
Q ss_pred CccccccccccC-------------CceEEeCCCCchhhHHhHHHHhccCCccccccccc
Q 010517 453 SSSSCVICWEAP-------------VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKI 499 (508)
Q Consensus 453 ~~~~C~iC~~~~-------------~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i 499 (508)
++..|.||||.. ..+--+||||.+ ..+|.+.|......||+||.++
T Consensus 286 ~D~~C~ICmde~~h~~~~~~~~~~~~~pKrLpCGHil-Hl~CLknW~ERqQTCPICr~p~ 344 (491)
T COG5243 286 SDRTCTICMDEMFHPDHEPLPRGLDMTPKRLPCGHIL-HLHCLKNWLERQQTCPICRRPV 344 (491)
T ss_pred CCCeEEEecccccCCCCccCcccccCCccccccccee-eHHHHHHHHHhccCCCcccCcc
Confidence 347999999982 233567999999 9999999998888999999995
No 145
>COG5540 RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.77 E-value=1.3e-05 Score=74.64 Aligned_cols=45 Identities=31% Similarity=0.713 Sum_probs=38.3
Q ss_pred cccccccccCC---ceEEeCCCCchhhHHhHHHHhc-cCCcccccccccc
Q 010517 455 SSCVICWEAPV---EGACVPCGHMAGCMSCLSEIKA-KKGDCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~~~---~~~~~pCgH~~~C~~C~~~~~~-~~~~CP~Cr~~i~ 500 (508)
.+|.|||+.+. ..+.+||.|.| ...|+.+|-. -+..||+||.+|.
T Consensus 324 veCaICms~fiK~d~~~vlPC~H~F-H~~Cv~kW~~~y~~~CPvCrt~iP 372 (374)
T COG5540 324 VECAICMSNFIKNDRLRVLPCDHRF-HVGCVDKWLLGYSNKCPVCRTAIP 372 (374)
T ss_pred ceEEEEhhhhcccceEEEeccCcee-chhHHHHHHhhhcccCCccCCCCC
Confidence 69999999752 36678999999 9999999987 4678999999874
No 146
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=97.75 E-value=2.7e-05 Score=59.01 Aligned_cols=48 Identities=21% Similarity=0.282 Sum_probs=39.1
Q ss_pred CccccccccccCCceEEeCCCCchhhHHhHHHHhcc-CCccccccccccc
Q 010517 453 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQ 501 (508)
Q Consensus 453 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~CP~Cr~~i~~ 501 (508)
++..|+||.+...++|.+||||.| +..|+.+|... ...||+|+.++..
T Consensus 3 ~~f~CpIt~~lM~dPVi~~~G~ty-er~~I~~~l~~~~~~~P~t~~~l~~ 51 (73)
T PF04564_consen 3 DEFLCPITGELMRDPVILPSGHTY-ERSAIERWLEQNGGTDPFTRQPLSE 51 (73)
T ss_dssp GGGB-TTTSSB-SSEEEETTSEEE-EHHHHHHHHCTTSSB-TTT-SB-SG
T ss_pred cccCCcCcCcHhhCceeCCcCCEE-cHHHHHHHHHcCCCCCCCCCCcCCc
Confidence 447999999999999999999999 99999999887 6789999999874
No 147
>KOG4628 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.65 E-value=3.1e-05 Score=75.31 Aligned_cols=46 Identities=28% Similarity=0.689 Sum_probs=38.4
Q ss_pred cccccccccCC---ceEEeCCCCchhhHHhHHHHhccCC-ccccccccccc
Q 010517 455 SSCVICWEAPV---EGACVPCGHMAGCMSCLSEIKAKKG-DCPVCRTKINQ 501 (508)
Q Consensus 455 ~~C~iC~~~~~---~~~~~pCgH~~~C~~C~~~~~~~~~-~CP~Cr~~i~~ 501 (508)
..|.||+|... ....+||+|.| ...|+..|..+.+ .||+|+..|.+
T Consensus 230 ~~CaIClEdY~~GdklRiLPC~H~F-H~~CIDpWL~~~r~~CPvCK~di~~ 279 (348)
T KOG4628|consen 230 DTCAICLEDYEKGDKLRILPCSHKF-HVNCIDPWLTQTRTFCPVCKRDIRT 279 (348)
T ss_pred ceEEEeecccccCCeeeEecCCCch-hhccchhhHhhcCccCCCCCCcCCC
Confidence 49999999864 34567999999 9999999988764 59999997754
No 148
>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=97.54 E-value=7.6e-05 Score=70.75 Aligned_cols=58 Identities=33% Similarity=0.731 Sum_probs=46.7
Q ss_pred CCCCCCCCCCccccccccccCCceEEeCCCCchhhHHhHHHHhcc--CCccccccccccce
Q 010517 444 SASNVKDDGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK--KGDCPVCRTKINQV 502 (508)
Q Consensus 444 ~~~~~~~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~--~~~CP~Cr~~i~~~ 502 (508)
.++.++.+++...|.||-+...-...+||+|.. |..|+-+++.. .+.||+||..-..+
T Consensus 51 tsSaddtDEen~~C~ICA~~~TYs~~~PC~H~~-CH~Ca~RlRALY~~K~C~~CrTE~e~V 110 (493)
T COG5236 51 TSSADDTDEENMNCQICAGSTTYSARYPCGHQI-CHACAVRLRALYMQKGCPLCRTETEAV 110 (493)
T ss_pred cccccccccccceeEEecCCceEEEeccCCchH-HHHHHHHHHHHHhccCCCccccccceE
Confidence 334445566678999999998888889999999 99999998764 56899999876554
No 149
>KOG4692 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.50 E-value=5.5e-05 Score=71.92 Aligned_cols=51 Identities=27% Similarity=0.785 Sum_probs=44.2
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccccee
Q 010517 452 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVI 503 (508)
Q Consensus 452 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~i 503 (508)
.++..|+||+..+.+.+|.||+|.- |+.|+.+..-..+.|=.|.+.+...+
T Consensus 420 sEd~lCpICyA~pi~Avf~PC~H~S-C~~CI~qHlmN~k~CFfCktTv~~~~ 470 (489)
T KOG4692|consen 420 SEDNLCPICYAGPINAVFAPCSHRS-CYGCITQHLMNCKRCFFCKTTVIDVI 470 (489)
T ss_pred cccccCcceecccchhhccCCCCch-HHHHHHHHHhcCCeeeEecceeeehh
Confidence 4568999999999999999999999 99999987665678999998887544
No 150
>KOG1785 consensus Tyrosine kinase negative regulator CBL [Defense mechanisms]
Probab=97.44 E-value=6e-05 Score=72.79 Aligned_cols=47 Identities=36% Similarity=0.830 Sum_probs=42.2
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhcc--CCccccccccccce
Q 010517 455 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK--KGDCPVCRTKINQV 502 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~--~~~CP~Cr~~i~~~ 502 (508)
..|-||-|..+++-..||||.. |..|...|... ...||.||-.|...
T Consensus 370 eLCKICaendKdvkIEPCGHLl-Ct~CLa~WQ~sd~gq~CPFCRcEIKGt 418 (563)
T KOG1785|consen 370 ELCKICAENDKDVKIEPCGHLL-CTSCLAAWQDSDEGQTCPFCRCEIKGT 418 (563)
T ss_pred HHHHHhhccCCCcccccccchH-HHHHHHhhcccCCCCCCCceeeEeccc
Confidence 5899999999999999999999 99999999865 35799999999753
No 151
>KOG2177 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.43 E-value=5e-05 Score=75.67 Aligned_cols=45 Identities=38% Similarity=0.775 Sum_probs=39.2
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccc
Q 010517 452 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRT 497 (508)
Q Consensus 452 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~ 497 (508)
.++..|+||++.+..+..+||||.| |..|+..++...-.||.||.
T Consensus 11 ~~~~~C~iC~~~~~~p~~l~C~H~~-c~~C~~~~~~~~~~Cp~cr~ 55 (386)
T KOG2177|consen 11 QEELTCPICLEYFREPVLLPCGHNF-CRACLTRSWEGPLSCPVCRP 55 (386)
T ss_pred cccccChhhHHHhhcCccccccchH-hHHHHHHhcCCCcCCcccCC
Confidence 4557999999999999999999999 99999998863347999994
No 152
>PF14835 zf-RING_6: zf-RING of BARD1-type protein; PDB: 1JM7_B.
Probab=97.35 E-value=4.2e-05 Score=54.57 Aligned_cols=43 Identities=35% Similarity=0.859 Sum_probs=23.1
Q ss_pred cccccccccCCceEE-eCCCCchhhHHhHHHHhccCCcccccccccc
Q 010517 455 SSCVICWEAPVEGAC-VPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~-~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~ 500 (508)
..|.+|.+....+|. ..|.|.| |..|+.+-- ...||+|+.|..
T Consensus 8 LrCs~C~~~l~~pv~l~~CeH~f-Cs~Ci~~~~--~~~CPvC~~Paw 51 (65)
T PF14835_consen 8 LRCSICFDILKEPVCLGGCEHIF-CSSCIRDCI--GSECPVCHTPAW 51 (65)
T ss_dssp TS-SSS-S--SS-B---SSS--B--TTTGGGGT--TTB-SSS--B-S
T ss_pred cCCcHHHHHhcCCceeccCccHH-HHHHhHHhc--CCCCCCcCChHH
Confidence 589999999999975 5999999 999986632 235999999874
No 153
>PF12861 zf-Apc11: Anaphase-promoting complex subunit 11 RING-H2 finger
Probab=97.30 E-value=0.00024 Score=54.23 Aligned_cols=34 Identities=29% Similarity=0.620 Sum_probs=27.7
Q ss_pred ceEEeCCCCchhhHHhHHHHhcc---CCcccccccccc
Q 010517 466 EGACVPCGHMAGCMSCLSEIKAK---KGDCPVCRTKIN 500 (508)
Q Consensus 466 ~~~~~pCgH~~~C~~C~~~~~~~---~~~CP~Cr~~i~ 500 (508)
..+.-.|+|.| ...|+.+|... +..||+||++..
T Consensus 46 plv~g~C~H~F-H~hCI~kWl~~~~~~~~CPmCR~~w~ 82 (85)
T PF12861_consen 46 PLVWGKCSHNF-HMHCILKWLSTQSSKGQCPMCRQPWK 82 (85)
T ss_pred ceeeccCccHH-HHHHHHHHHccccCCCCCCCcCCeee
Confidence 34555899999 99999998774 468999999764
No 154
>KOG4159 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.22 E-value=0.00016 Score=72.45 Aligned_cols=49 Identities=31% Similarity=0.807 Sum_probs=43.9
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010517 452 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 501 (508)
Q Consensus 452 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~ 501 (508)
..+..|.||+..+..++..||||.+ |..|+.+....+..||.||.++.+
T Consensus 82 ~sef~c~vc~~~l~~pv~tpcghs~-c~~Cl~r~ld~~~~cp~Cr~~l~e 130 (398)
T KOG4159|consen 82 RSEFECCVCSRALYPPVVTPCGHSF-CLECLDRSLDQETECPLCRDELVE 130 (398)
T ss_pred cchhhhhhhHhhcCCCccccccccc-cHHHHHHHhccCCCCccccccccc
Confidence 3457999999999999999999999 999999977777899999998875
No 155
>PF14447 Prok-RING_4: Prokaryotic RING finger family 4
Probab=97.17 E-value=0.00012 Score=50.60 Aligned_cols=45 Identities=31% Similarity=0.847 Sum_probs=37.2
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010517 454 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 501 (508)
Q Consensus 454 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~ 501 (508)
+..|..|.......+++||||.+ |..|...... ..||+|.++|+.
T Consensus 7 ~~~~~~~~~~~~~~~~~pCgH~I-~~~~f~~~rY--ngCPfC~~~~~~ 51 (55)
T PF14447_consen 7 EQPCVFCGFVGTKGTVLPCGHLI-CDNCFPGERY--NGCPFCGTPFEF 51 (55)
T ss_pred ceeEEEcccccccccccccccee-eccccChhhc--cCCCCCCCcccC
Confidence 36899999998888999999999 9999665443 359999999863
No 156
>KOG0311 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.10 E-value=7.4e-05 Score=71.50 Aligned_cols=50 Identities=24% Similarity=0.610 Sum_probs=39.3
Q ss_pred CccccccccccCCceE-EeCCCCchhhHHhHHH-HhccCCcccccccccccee
Q 010517 453 SSSSCVICWEAPVEGA-CVPCGHMAGCMSCLSE-IKAKKGDCPVCRTKINQVI 503 (508)
Q Consensus 453 ~~~~C~iC~~~~~~~~-~~pCgH~~~C~~C~~~-~~~~~~~CP~Cr~~i~~~i 503 (508)
.+..|+||++...... ..-|.|+| |.+|+.. ++..+..||.||+......
T Consensus 42 ~~v~c~icl~llk~tmttkeClhrf-c~~ci~~a~r~gn~ecptcRk~l~Skr 93 (381)
T KOG0311|consen 42 IQVICPICLSLLKKTMTTKECLHRF-CFDCIWKALRSGNNECPTCRKKLVSKR 93 (381)
T ss_pred hhhccHHHHHHHHhhcccHHHHHHH-HHHHHHHHHHhcCCCCchHHhhccccc
Confidence 4479999999976544 34899999 9999876 4455788999999887543
No 157
>KOG0802 consensus E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.10 E-value=0.00022 Score=75.98 Aligned_cols=47 Identities=36% Similarity=0.767 Sum_probs=41.5
Q ss_pred CccccccccccCCc-----eEEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010517 453 SSSSCVICWEAPVE-----GACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 500 (508)
Q Consensus 453 ~~~~C~iC~~~~~~-----~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~ 500 (508)
....|.||+|.... +-.+||+|.| |..|...|-++...||+||..+.
T Consensus 290 ~~~~C~IC~e~l~~~~~~~~~rL~C~Hif-h~~CL~~W~er~qtCP~CR~~~~ 341 (543)
T KOG0802|consen 290 SDELCIICLEELHSGHNITPKRLPCGHIF-HDSCLRSWFERQQTCPTCRTVLY 341 (543)
T ss_pred cCCeeeeechhhccccccccceeecccch-HHHHHHHHHHHhCcCCcchhhhh
Confidence 34799999999877 6788999999 99999999998889999999543
No 158
>KOG1039 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=96.98 E-value=0.00034 Score=68.63 Aligned_cols=51 Identities=31% Similarity=0.683 Sum_probs=41.7
Q ss_pred CccccccccccCCceE-----E---eCCCCchhhHHhHHHHh--cc-----CCccccccccccceeE
Q 010517 453 SSSSCVICWEAPVEGA-----C---VPCGHMAGCMSCLSEIK--AK-----KGDCPVCRTKINQVIR 504 (508)
Q Consensus 453 ~~~~C~iC~~~~~~~~-----~---~pCgH~~~C~~C~~~~~--~~-----~~~CP~Cr~~i~~~i~ 504 (508)
.+.+|.||||.....+ + .+|.|.| |..|+..|+ ++ .+.||.||.+...++.
T Consensus 160 ~~k~CGICme~i~ek~~~~~rfgilpnC~H~~-Cl~Cir~wr~~~q~~~~~sksCP~CRv~s~~v~p 225 (344)
T KOG1039|consen 160 SEKECGICMETINEKAASERRFGILPNCNHSF-CLNCIRKWRQATQFESKTSKSCPFCRVPSSFVNP 225 (344)
T ss_pred ccccceehhhhccccchhhhhcccCCCcchhh-hhcHhHhhhhhhccccccccCCCcccCccccccc
Confidence 4479999999977666 5 6899999 999999998 33 3679999998876553
No 159
>PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B.
Probab=96.80 E-value=0.00063 Score=45.98 Aligned_cols=42 Identities=31% Similarity=0.755 Sum_probs=21.2
Q ss_pred cccccccC--CceEEe--CCCCchhhHHhHHHHhc-cCCccccccccc
Q 010517 457 CVICWEAP--VEGACV--PCGHMAGCMSCLSEIKA-KKGDCPVCRTKI 499 (508)
Q Consensus 457 C~iC~~~~--~~~~~~--pCgH~~~C~~C~~~~~~-~~~~CP~Cr~~i 499 (508)
|++|.+.. .+..|. +||+.+ |..|..++.. ..+.||-||++.
T Consensus 1 cp~C~e~~d~~d~~~~PC~Cgf~I-C~~C~~~i~~~~~g~CPgCr~~Y 47 (48)
T PF14570_consen 1 CPLCDEELDETDKDFYPCECGFQI-CRFCYHDILENEGGRCPGCREPY 47 (48)
T ss_dssp -TTTS-B--CCCTT--SSTTS-----HHHHHHHTTSS-SB-TTT--B-
T ss_pred CCCcccccccCCCccccCcCCCcH-HHHHHHHHHhccCCCCCCCCCCC
Confidence 56777664 333445 567888 9999999986 468999999875
No 160
>COG5175 MOT2 Transcriptional repressor [Transcription]
Probab=96.74 E-value=0.0011 Score=62.94 Aligned_cols=49 Identities=31% Similarity=0.825 Sum_probs=37.8
Q ss_pred CCccccccccccC--CceEEe--CCCCchhhHHhHHHHhcc-CCccccccccccc
Q 010517 452 GSSSSCVICWEAP--VEGACV--PCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQ 501 (508)
Q Consensus 452 ~~~~~C~iC~~~~--~~~~~~--pCgH~~~C~~C~~~~~~~-~~~CP~Cr~~i~~ 501 (508)
+++..|+.|+|.. .+.-|. |||..+ |..|...++.. +++||-||....+
T Consensus 12 deed~cplcie~mditdknf~pc~cgy~i-c~fc~~~irq~lngrcpacrr~y~d 65 (480)
T COG5175 12 DEEDYCPLCIEPMDITDKNFFPCPCGYQI-CQFCYNNIRQNLNGRCPACRRKYDD 65 (480)
T ss_pred cccccCcccccccccccCCcccCCcccHH-HHHHHHHHHhhccCCChHhhhhccc
Confidence 3446799999973 344455 677777 99999999875 7899999998763
No 161
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.65 E-value=0.0029 Score=37.15 Aligned_cols=27 Identities=44% Similarity=0.758 Sum_probs=13.6
Q ss_pred CChHHHHHHHhCCCHHHHHHHHHcCCCC
Q 010517 50 GKTPLIVACMDSGLINVAKTLIELGANI 77 (508)
Q Consensus 50 G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~ 77 (508)
|.||||+|+.. ++.+++++|++++.++
T Consensus 2 ~~~~l~~~~~~-~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAEN-GNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHc-CCHHHHHHHHHcCCCC
Confidence 44555555544 5555555555554443
No 162
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.64 E-value=0.0035 Score=62.93 Aligned_cols=64 Identities=20% Similarity=0.137 Sum_probs=45.5
Q ss_pred HHHHHHHHHcCCCCccc----CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHH
Q 010517 64 INVAKTLIELGANINAY----RPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVAR 127 (508)
Q Consensus 64 ~~~v~~Ll~~ga~~n~~----~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~ 127 (508)
...+++|.+++.+.|.. ..+..--|+||||+..|..++|.+||+.|+|+...|..|+||..++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 45677777777666542 11334567788888888888888888888888888888888877766
No 163
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.62 E-value=0.0035 Score=36.78 Aligned_cols=26 Identities=54% Similarity=0.736 Sum_probs=12.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCC
Q 010517 86 GGTPLHHAAKRGLEPTVRLLLSCGAN 111 (508)
Q Consensus 86 g~tpLh~A~~~g~~~~v~~Ll~~ga~ 111 (508)
|.||||+|+..++.+++++|++.+.+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 34455555555555555555544443
No 164
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.60 E-value=0.0033 Score=63.09 Aligned_cols=64 Identities=28% Similarity=0.303 Sum_probs=54.5
Q ss_pred HHHHHHHHHcCCCCCc------cCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHc
Q 010517 30 VDAIRALRSQGASLEW------MDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKR 96 (508)
Q Consensus 30 ~~~v~~Ll~~g~~~~~------~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~ 96 (508)
...|++|.+++.+.|. .+..--|+||||+.. |..++|.+||+.|+|+-.+ |..|+||.+++...
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~q-g~~k~v~~~Leeg~Dp~~k--d~~Grtpy~ls~nk 473 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQ-GARKCVKYFLEEGCDPSTK--DGAGRTPYSLSANK 473 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhc-chHHHHHHHHHhcCCchhc--ccCCCCcccccccH
Confidence 5678889998877643 244567999999997 9999999999999999998 89999999999833
No 165
>TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1. All proteins in this family for which functions are known are cyclin dependent protein kinases that are components of TFIIH, a complex that is involved in nucleotide excision repair and transcription initiation. Also known as MAT1 (menage a trois 1). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=96.48 E-value=0.0022 Score=61.68 Aligned_cols=30 Identities=37% Similarity=0.972 Sum_probs=25.8
Q ss_pred CCCCchhhHHhHHHHhcc-CCccccccccccc
Q 010517 471 PCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQ 501 (508)
Q Consensus 471 pCgH~~~C~~C~~~~~~~-~~~CP~Cr~~i~~ 501 (508)
+|||.| |..|+.+++.. ...||.|+.++..
T Consensus 25 ~CGH~~-C~sCv~~l~~~~~~~CP~C~~~lrk 55 (309)
T TIGR00570 25 VCGHTL-CESCVDLLFVRGSGSCPECDTPLRK 55 (309)
T ss_pred CCCCcc-cHHHHHHHhcCCCCCCCCCCCccch
Confidence 899999 99999998754 4579999998864
No 166
>KOG2879 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=96.39 E-value=0.0029 Score=58.75 Aligned_cols=45 Identities=27% Similarity=0.817 Sum_probs=36.5
Q ss_pred cccccccccCCceEEe-CCCCchhhHHhHHHHhc--cCCcccccccccc
Q 010517 455 SSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKA--KKGDCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~--~~~~CP~Cr~~i~ 500 (508)
.+|++|-+.+..+... +|||.+ |+.|+..-.. ..=.||.|..++.
T Consensus 240 ~~C~~Cg~~PtiP~~~~~C~Hiy-CY~Ci~ts~~~~asf~Cp~Cg~~~~ 287 (298)
T KOG2879|consen 240 TECPVCGEPPTIPHVIGKCGHIY-CYYCIATSRLWDASFTCPLCGENVE 287 (298)
T ss_pred ceeeccCCCCCCCeeecccccee-ehhhhhhhhcchhhcccCccCCCCc
Confidence 6999999999888766 699999 9999876443 2336999988876
No 167
>KOG1813 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=96.20 E-value=0.0015 Score=61.34 Aligned_cols=48 Identities=25% Similarity=0.527 Sum_probs=41.7
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccccee
Q 010517 455 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVI 503 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~i 503 (508)
..|-||...+.++|...|+|.| |..|+..--+....|.+|.+.+...+
T Consensus 242 f~c~icr~~f~~pVvt~c~h~f-c~~ca~~~~qk~~~c~vC~~~t~g~~ 289 (313)
T KOG1813|consen 242 FKCFICRKYFYRPVVTKCGHYF-CEVCALKPYQKGEKCYVCSQQTHGSF 289 (313)
T ss_pred ccccccccccccchhhcCCcee-ehhhhccccccCCcceeccccccccc
Confidence 4799999999999999999999 99998876666678999999886544
No 168
>COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only]
Probab=96.19 E-value=0.0021 Score=56.39 Aligned_cols=47 Identities=26% Similarity=0.467 Sum_probs=40.3
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccce
Q 010517 455 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQV 502 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~ 502 (508)
..|.||-.-...+|+..|||.| |..|+.+--+....|-+|.+.....
T Consensus 197 F~C~iCKkdy~spvvt~CGH~F-C~~Cai~~y~kg~~C~~Cgk~t~G~ 243 (259)
T COG5152 197 FLCGICKKDYESPVVTECGHSF-CSLCAIRKYQKGDECGVCGKATYGR 243 (259)
T ss_pred eeehhchhhccchhhhhcchhH-HHHHHHHHhccCCcceecchhhccc
Confidence 5899999999999999999999 9999887666667899998765543
No 169
>KOG0825 consensus PHD Zn-finger protein [General function prediction only]
Probab=96.14 E-value=0.0035 Score=65.98 Aligned_cols=52 Identities=21% Similarity=0.391 Sum_probs=42.3
Q ss_pred CccccccccccCCceE---EeCCCCchhhHHhHHHHhccCCccccccccccceeEe
Q 010517 453 SSSSCVICWEAPVEGA---CVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRL 505 (508)
Q Consensus 453 ~~~~C~iC~~~~~~~~---~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~i~i 505 (508)
....|++|+....+-. -.+|+|.| |..|+..|.+-...||+||..+.+++.+
T Consensus 122 ~~~~CP~Ci~s~~DqL~~~~k~c~H~F-C~~Ci~sWsR~aqTCPiDR~EF~~v~V~ 176 (1134)
T KOG0825|consen 122 VENQCPNCLKSCNDQLEESEKHTAHYF-CEECVGSWSRCAQTCPVDRGEFGEVKVL 176 (1134)
T ss_pred hhhhhhHHHHHHHHHhhcccccccccc-HHHHhhhhhhhcccCchhhhhhheeeee
Confidence 4468999997754433 23999999 9999999998777899999999887765
No 170
>PF07800 DUF1644: Protein of unknown function (DUF1644); InterPro: IPR012866 This family consists of sequences found in a number of hypothetical plant proteins of unknown function. The region of interest contains nine highly conserved cysteine residues and is approximately 160 amino acids in length, which probably represent a zinc-binding domain.
Probab=95.97 E-value=0.0072 Score=51.63 Aligned_cols=52 Identities=29% Similarity=0.691 Sum_probs=37.9
Q ss_pred ccccccccccCCceEEeCCC-Cchh-----------hHHhHHHHhcc-------------------------------CC
Q 010517 454 SSSCVICWEAPVEGACVPCG-HMAG-----------CMSCLSEIKAK-------------------------------KG 490 (508)
Q Consensus 454 ~~~C~iC~~~~~~~~~~pCg-H~~~-----------C~~C~~~~~~~-------------------------------~~ 490 (508)
+..|+||||.+=+.|++-|. |.-. -.-|..+.++. +-
T Consensus 2 d~~CpICme~PHNAVLLlCSS~~kgcRpymc~Ts~rhSNCLdqfkka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 81 (162)
T PF07800_consen 2 DVTCPICMEHPHNAVLLLCSSHEKGCRPYMCDTSYRHSNCLDQFKKAYGKSSSSSSQSSSSAPSDSSSSESSESQEQPEL 81 (162)
T ss_pred CccCceeccCCCceEEEEeccccCCccccccCCccchhHHHHHHHHHhcCCCCccccccccCcCCCcccccccccccccc
Confidence 36899999999999999775 3332 34577776541 12
Q ss_pred ccccccccccceeEe
Q 010517 491 DCPVCRTKINQVIRL 505 (508)
Q Consensus 491 ~CP~Cr~~i~~~i~i 505 (508)
.||+||..|...+.+
T Consensus 82 ~CPLCRG~V~GWtvv 96 (162)
T PF07800_consen 82 ACPLCRGEVKGWTVV 96 (162)
T ss_pred cCccccCceeceEEc
Confidence 499999999887765
No 171
>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]
Probab=95.91 E-value=0.0053 Score=60.93 Aligned_cols=41 Identities=32% Similarity=0.650 Sum_probs=32.6
Q ss_pred cccccccccCC-ce---EEeCCCCchhhHHhHHHHhccCCcccccccc
Q 010517 455 SSCVICWEAPV-EG---ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTK 498 (508)
Q Consensus 455 ~~C~iC~~~~~-~~---~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~ 498 (508)
..|+||+|+.- ++ +-..|.|.| -..|..+|+.. .||+||--
T Consensus 176 PTCpVCLERMD~s~~gi~t~~c~Hsf-h~~cl~~w~~~--scpvcR~~ 220 (493)
T KOG0804|consen 176 PTCPVCLERMDSSTTGILTILCNHSF-HCSCLMKWWDS--SCPVCRYC 220 (493)
T ss_pred CCcchhHhhcCccccceeeeeccccc-chHHHhhcccC--cChhhhhh
Confidence 58999999842 22 455899999 88999999874 59999864
No 172
>KOG1734 consensus Predicted RING-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=95.86 E-value=0.0035 Score=57.84 Aligned_cols=46 Identities=24% Similarity=0.559 Sum_probs=36.8
Q ss_pred ccccccccccCC----------ceEEeCCCCchhhHHhHHHHhcc--CCcccccccccc
Q 010517 454 SSSCVICWEAPV----------EGACVPCGHMAGCMSCLSEIKAK--KGDCPVCRTKIN 500 (508)
Q Consensus 454 ~~~C~iC~~~~~----------~~~~~pCgH~~~C~~C~~~~~~~--~~~CP~Cr~~i~ 500 (508)
++.|.||-.+.- +..-+.|+|.| .+.|++-|... +..||.|.+.|+
T Consensus 224 d~vCaVCg~~~~~s~~eegvienty~LsCnHvF-HEfCIrGWcivGKkqtCPYCKekVd 281 (328)
T KOG1734|consen 224 DSVCAVCGQQIDVSVDEEGVIENTYKLSCNHVF-HEFCIRGWCIVGKKQTCPYCKEKVD 281 (328)
T ss_pred cchhHhhcchheeecchhhhhhhheeeecccch-HHHhhhhheeecCCCCCchHHHHhh
Confidence 369999987643 23356999999 99999999875 457999998886
No 173
>KOG0828 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=95.86 E-value=0.0038 Score=62.38 Aligned_cols=48 Identities=31% Similarity=0.628 Sum_probs=37.4
Q ss_pred CCcccccccccc-----------------CCceEEeCCCCchhhHHhHHHHhcc-CCcccccccccc
Q 010517 452 GSSSSCVICWEA-----------------PVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKIN 500 (508)
Q Consensus 452 ~~~~~C~iC~~~-----------------~~~~~~~pCgH~~~C~~C~~~~~~~-~~~CP~Cr~~i~ 500 (508)
.....|+|||.. .++..+.||.|.| ...|..+|-.. +-.||+||.++.
T Consensus 569 ~~t~dC~ICMt~I~l~~~~s~~~~~~~~~~~nYm~tPC~Hif-H~~CL~~WMd~ykl~CPvCR~pLP 634 (636)
T KOG0828|consen 569 RRTNDCVICMTPIDLRSTGSDCMVASMMVRRNYMLTPCHHIF-HRQCLLQWMDTYKLICPVCRCPLP 634 (636)
T ss_pred hccccceEeccccceeeccCcchhhhhhhhccccccchHHHH-HHHHHHHHHhhhcccCCccCCCCC
Confidence 345789999963 1235567999999 99999998774 447999999874
No 174
>PF04641 Rtf2: Rtf2 RING-finger
Probab=95.58 E-value=0.012 Score=56.40 Aligned_cols=51 Identities=27% Similarity=0.462 Sum_probs=40.5
Q ss_pred CccccccccccC----CceEEeCCCCchhhHHhHHHHhccCCcccccccccc--ceeEe
Q 010517 453 SSSSCVICWEAP----VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN--QVIRL 505 (508)
Q Consensus 453 ~~~~C~iC~~~~----~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~--~~i~i 505 (508)
....|+|....+ .-+++.||||+| ++.++..+. ....||+|-.++. ++|.|
T Consensus 112 ~~~~CPvt~~~~~~~~~fv~l~~cG~V~-s~~alke~k-~~~~Cp~c~~~f~~~DiI~L 168 (260)
T PF04641_consen 112 GRFICPVTGKEFNGKHKFVYLRPCGCVF-SEKALKELK-KSKKCPVCGKPFTEEDIIPL 168 (260)
T ss_pred ceeECCCCCcccCCceeEEEEcCCCCEe-eHHHHHhhc-ccccccccCCccccCCEEEe
Confidence 346999998765 455666999999 999999997 3457999999986 46655
No 175
>smart00744 RINGv The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins. Some of these proteins have been shown both in vivo and in vitro to have ubiquitin E3 ligase activity. The RING-variant domain is reminiscent of both the RING and the PHD domains and may represent an evolutionary intermediate. To describe this domain the term PHD/LAP domain has been used in the past. Extended description: The RING-variant (RINGv) domain contains a C4HC3 zinc-finger-like motif similar to the PHD domain, while some of the spacing between the Cys/His residues follow a pattern somewhat closer to that found in the RING domain. The RINGv domain, similar to the RING, PHD and LIM domains, is thought to bind two zinc ions co-ordinated by the highly conserved Cys and His residues. RING variant domain: C-x (2) -C-x(10-45)-C-x (1) -C-x (7) -H-x(2)-C-x(11-25)-C-x(2)-C As opposed to a PHD: C-x(1-2) -C-x (7-13)-C-x(2-4)-C-x(4-5)-H-x(2)-C-x(10-21)-C-x(2)-C Class
Probab=95.17 E-value=0.023 Score=39.11 Aligned_cols=40 Identities=23% Similarity=0.640 Sum_probs=31.4
Q ss_pred ccccccc--cCCceEEeCCC-----CchhhHHhHHHHhccC--Ccccccc
Q 010517 456 SCVICWE--APVEGACVPCG-----HMAGCMSCLSEIKAKK--GDCPVCR 496 (508)
Q Consensus 456 ~C~iC~~--~~~~~~~~pCg-----H~~~C~~C~~~~~~~~--~~CP~Cr 496 (508)
.|-||++ ...+..+.||. |.+ ...|+.+|...+ ..||+|+
T Consensus 1 ~CrIC~~~~~~~~~l~~PC~C~G~~~~v-H~~Cl~~W~~~~~~~~C~iC~ 49 (49)
T smart00744 1 ICRICHDEGDEGDPLVSPCRCKGSLKYV-HQECLERWINESGNKTCEICK 49 (49)
T ss_pred CccCCCCCCCCCCeeEeccccCCchhHH-HHHHHHHHHHHcCCCcCCCCC
Confidence 4889997 56677788997 556 999999998653 4799994
No 176
>KOG1002 consensus Nucleotide excision repair protein RAD16 [Replication, recombination and repair]
Probab=94.85 E-value=0.011 Score=59.53 Aligned_cols=49 Identities=22% Similarity=0.601 Sum_probs=40.3
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHHHhcc-----CCcccccccccc
Q 010517 451 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-----KGDCPVCRTKIN 500 (508)
Q Consensus 451 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-----~~~CP~Cr~~i~ 500 (508)
..++.+|.+|.|...+.+...|.|.| |..|++..... +..||.|..+++
T Consensus 533 nk~~~~C~lc~d~aed~i~s~ChH~F-CrlCi~eyv~~f~~~~nvtCP~C~i~Ls 586 (791)
T KOG1002|consen 533 NKGEVECGLCHDPAEDYIESSCHHKF-CRLCIKEYVESFMENNNVTCPVCHIGLS 586 (791)
T ss_pred ccCceeecccCChhhhhHhhhhhHHH-HHHHHHHHHHhhhcccCCCCcccccccc
Confidence 34557999999999999999999999 99999775442 357999987654
No 177
>KOG0297 consensus TNF receptor-associated factor [Signal transduction mechanisms]
Probab=94.74 E-value=0.011 Score=60.09 Aligned_cols=49 Identities=33% Similarity=0.737 Sum_probs=42.9
Q ss_pred CccccccccccCCceEEe-CCCCchhhHHhHHHHhccCCccccccccccce
Q 010517 453 SSSSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAKKGDCPVCRTKINQV 502 (508)
Q Consensus 453 ~~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~ 502 (508)
+...|++|+....+++.. .|||.| |..|...+......||.||..+...
T Consensus 20 ~~l~C~~C~~vl~~p~~~~~cgh~f-C~~C~~~~~~~~~~cp~~~~~~~~~ 69 (391)
T KOG0297|consen 20 ENLLCPICMSVLRDPVQTTTCGHRF-CAGCLLESLSNHQKCPVCRQELTQA 69 (391)
T ss_pred ccccCccccccccCCCCCCCCCCcc-cccccchhhccCcCCcccccccchh
Confidence 347999999999999994 999999 9999999888778899998887643
No 178
>KOG3039 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.73 E-value=0.024 Score=51.75 Aligned_cols=52 Identities=19% Similarity=0.382 Sum_probs=42.1
Q ss_pred CccccccccccCCc----eEEeCCCCchhhHHhHHHHhccCCccccccccccc--eeEe
Q 010517 453 SSSSCVICWEAPVE----GACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ--VIRL 505 (508)
Q Consensus 453 ~~~~C~iC~~~~~~----~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~--~i~i 505 (508)
....|+||.+...+ +++.||||+| |++|++++-+....||+|-.+..+ +|.|
T Consensus 220 ~ryiCpvtrd~LtNt~~ca~Lr~sg~Vv-~~ecvEklir~D~v~pv~d~plkdrdiI~L 277 (303)
T KOG3039|consen 220 KRYICPVTRDTLTNTTPCAVLRPSGHVV-TKECVEKLIRKDMVDPVTDKPLKDRDIIGL 277 (303)
T ss_pred cceecccchhhhcCccceEEeccCCcEe-eHHHHHHhccccccccCCCCcCcccceEee
Confidence 44799999998543 4466999999 999999998877789999999874 4443
No 179
>KOG1001 consensus Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily [Transcription; Replication, recombination and repair]
Probab=94.13 E-value=0.023 Score=61.46 Aligned_cols=44 Identities=30% Similarity=0.720 Sum_probs=37.6
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhcc--CCcccccccccc
Q 010517 455 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK--KGDCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~--~~~CP~Cr~~i~ 500 (508)
..|.+|++ ...++..+|+|.+ |.+|....... ...||+||..+.
T Consensus 455 ~~c~ic~~-~~~~~it~c~h~~-c~~c~~~~i~~~~~~~~~~cr~~l~ 500 (674)
T KOG1001|consen 455 HWCHICCD-LDSFFITRCGHDF-CVECLKKSIQQSENAPCPLCRNVLK 500 (674)
T ss_pred cccccccc-cccceeecccchH-HHHHHHhccccccCCCCcHHHHHHH
Confidence 68999999 8888888999999 99998886654 246999998775
No 180
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=94.00 E-value=0.32 Score=44.45 Aligned_cols=114 Identities=12% Similarity=0.042 Sum_probs=55.3
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCC--CCCCCcHHHHHHH--c
Q 010517 21 LYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRP--GGRGGTPLHHAAK--R 96 (508)
Q Consensus 21 L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~--d~~g~tpLh~A~~--~ 96 (508)
|--|+..-+.+.+..++... ++-.++|-+|..+ +..+++-+|+..- +...+|. -..+..-+-|+.. .
T Consensus 157 ledAV~AsN~~~i~~~VtdK-------kdA~~Am~~si~~-~K~dva~~lls~f-~ft~~dv~~~~~~~ydieY~LS~h~ 227 (284)
T PF06128_consen 157 LEDAVKASNYEEISNLVTDK-------KDAHQAMWLSIGN-AKEDVALYLLSKF-NFTKQDVASMEKELYDIEYLLSEHS 227 (284)
T ss_pred HHHHHhhcCHHHHHHHhcch-------HHHHHHHHHHhcc-cHHHHHHHHHhhc-ceecchhhhcCcchhhHHHHHhhcC
Confidence 44455555555544443211 1234666666655 6666776666541 1111100 0112222333332 2
Q ss_pred CCHHHHHHHHHCC-CCccc---cCCCCCcHHHHHHHhCCHHHHHHHHHcCC
Q 010517 97 GLEPTVRLLLSCG-ANALV---RNDDCHTALGVARIKGHINVVRAIESHIC 143 (508)
Q Consensus 97 g~~~~v~~Ll~~g-a~~~~---~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga 143 (508)
.+..+++++|+.| +++|. .-+.|.|.|.-|.+.++.+++.+||++|+
T Consensus 228 a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 228 ASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred CcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 3445556666665 44442 23456666666666666666666666665
No 181
>KOG3002 consensus Zn finger protein [General function prediction only]
Probab=93.72 E-value=0.036 Score=53.80 Aligned_cols=44 Identities=32% Similarity=0.865 Sum_probs=36.7
Q ss_pred CccccccccccCCceEEeCC--CCchhhHHhHHHHhccCCccccccccccc
Q 010517 453 SSSSCVICWEAPVEGACVPC--GHMAGCMSCLSEIKAKKGDCPVCRTKINQ 501 (508)
Q Consensus 453 ~~~~C~iC~~~~~~~~~~pC--gH~~~C~~C~~~~~~~~~~CP~Cr~~i~~ 501 (508)
+..+|+||.+....+++ .| ||.. |..|..++.. +||.||.+|..
T Consensus 47 ~lleCPvC~~~l~~Pi~-QC~nGHla-CssC~~~~~~---~CP~Cr~~~g~ 92 (299)
T KOG3002|consen 47 DLLDCPVCFNPLSPPIF-QCDNGHLA-CSSCRTKVSN---KCPTCRLPIGN 92 (299)
T ss_pred hhccCchhhccCcccce-ecCCCcEe-hhhhhhhhcc---cCCcccccccc
Confidence 44799999999988877 46 7999 9999876655 69999999974
No 182
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=93.54 E-value=0.42 Score=43.67 Aligned_cols=94 Identities=19% Similarity=0.169 Sum_probs=69.4
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCCccC----CCCChHHHHHHHh-CCCHHHHHHHHHcC-CCCccc-CCCCCCCcH
Q 010517 17 KDELLYQWVIAGDVDAIRALRSQGASLEWMD----KEGKTPLIVACMD-SGLINVAKTLIELG-ANINAY-RPGGRGGTP 89 (508)
Q Consensus 17 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d----~~G~TpLh~Aa~~-~g~~~~v~~Ll~~g-a~~n~~-~~d~~g~tp 89 (508)
-.++|.++..++..+++.+||.+ .+....| ..+.--+-|+... +.+..++++.++.| +++|.. .+-+.|.|-
T Consensus 179 A~~Am~~si~~~K~dva~~lls~-f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtM 257 (284)
T PF06128_consen 179 AHQAMWLSIGNAKEDVALYLLSK-FNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTM 257 (284)
T ss_pred HHHHHHHHhcccHHHHHHHHHhh-cceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchH
Confidence 46889999999999999999984 2222222 1233345555433 45788999999998 566643 124679999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCC
Q 010517 90 LHHAAKRGLEPTVRLLLSCGAN 111 (508)
Q Consensus 90 Lh~A~~~g~~~~v~~Ll~~ga~ 111 (508)
|.-|.++++.+++.+||++||-
T Consensus 258 LDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 258 LDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred HHhHHhcCcHHHHHHHHHcCcc
Confidence 9999999999999999999984
No 183
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=93.46 E-value=0.67 Score=41.11 Aligned_cols=139 Identities=17% Similarity=0.090 Sum_probs=95.2
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcC
Q 010517 18 DELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRG 97 (508)
Q Consensus 18 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g 97 (508)
.-.|..|++.+.+.+++..-+...+- -...++..-.||+. .+.|+|+++ |-++... +-.+-+-.|....
T Consensus 47 ~CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~-qkydiV~WI---~qnL~i~----~~~~iFdIA~~~k 115 (192)
T PF03158_consen 47 WCLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEE-QKYDIVKWI---GQNLHIY----NPEDIFDIAFAKK 115 (192)
T ss_pred HHHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHH-ccccHHHHH---hhccCCC----Cchhhhhhhhhcc
Confidence 45678889999999998876643221 13457888899997 999999999 3334433 2235677888888
Q ss_pred CHHHH----HHHHHCCCCccccCCC--CCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHHHHHHhhcCCHHHH
Q 010517 98 LEPTV----RLLLSCGANALVRNDD--CHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIW 171 (508)
Q Consensus 98 ~~~~v----~~Ll~~ga~~~~~d~~--g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL~~~A~~~~~~~i~ 171 (508)
+.++. .+++++...-+..|.. -.--|..|+.+|....+.-.+++|.+++ .+.|. .|+..++.+|+
T Consensus 116 DlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~--------~~vls-~Av~ynhRkIL 186 (192)
T PF03158_consen 116 DLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVD--------IIVLS-QAVKYNHRKIL 186 (192)
T ss_pred chhHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCccc--------HHHHH-HHHHhhHHHHH
Confidence 77652 2233332111011100 0124678999999999999999998876 27888 99999999999
Q ss_pred HHhhh
Q 010517 172 VVVIP 176 (508)
Q Consensus 172 ~~Ll~ 176 (508)
.+++.
T Consensus 187 ~yfi~ 191 (192)
T PF03158_consen 187 DYFIR 191 (192)
T ss_pred HHhhc
Confidence 98874
No 184
>KOG3579 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=93.42 E-value=0.16 Score=47.56 Aligned_cols=33 Identities=33% Similarity=0.727 Sum_probs=28.6
Q ss_pred cccccccccCCceEEeCCC----CchhhHHhHHH-Hhcc
Q 010517 455 SSCVICWEAPVEGACVPCG----HMAGCMSCLSE-IKAK 488 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCg----H~~~C~~C~~~-~~~~ 488 (508)
..|.+|.|+..|.-|+-|- |.| |+.|... |+.+
T Consensus 269 LcCTLC~ERLEDTHFVQCPSVp~HKF-CFPCSResIK~Q 306 (352)
T KOG3579|consen 269 LCCTLCHERLEDTHFVQCPSVPSHKF-CFPCSRESIKQQ 306 (352)
T ss_pred eeehhhhhhhccCceeecCCCcccce-ecccCHHHHHhh
Confidence 6999999999999999995 999 9999877 4443
No 185
>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0.
Probab=93.36 E-value=0.055 Score=44.80 Aligned_cols=46 Identities=30% Similarity=0.669 Sum_probs=39.1
Q ss_pred cccccccccCCceEEe----CCCCchhhHHhHHHHhcc---CCccccccccccc
Q 010517 455 SSCVICWEAPVEGACV----PCGHMAGCMSCLSEIKAK---KGDCPVCRTKINQ 501 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~----pCgH~~~C~~C~~~~~~~---~~~CP~Cr~~i~~ 501 (508)
.+|.||.|...+.-|+ =||-.. |-.|...+|+. -+.||+|+..+.+
T Consensus 81 YeCnIC~etS~ee~FLKPneCCgY~i-Cn~Cya~LWK~~~~ypvCPvCkTSFKs 133 (140)
T PF05290_consen 81 YECNICKETSAEERFLKPNECCGYSI-CNACYANLWKFCNLYPVCPVCKTSFKS 133 (140)
T ss_pred eeccCcccccchhhcCCcccccchHH-HHHHHHHHHHHcccCCCCCcccccccc
Confidence 6999999998888877 499888 99998888875 3689999998864
No 186
>COG5194 APC11 Component of SCF ubiquitin ligase and anaphase-promoting complex [Posttranslational modification, protein turnover, chaperones / Cell division and chromosome partitioning]
Probab=93.32 E-value=0.095 Score=39.08 Aligned_cols=34 Identities=24% Similarity=0.341 Sum_probs=29.0
Q ss_pred ceEEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010517 466 EGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 500 (508)
Q Consensus 466 ~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~ 500 (508)
.++---|.|.| ...|+.+|...+..||++|++..
T Consensus 48 ~v~wG~CnHaF-H~HCI~rWL~Tk~~CPld~q~w~ 81 (88)
T COG5194 48 PVVWGVCNHAF-HDHCIYRWLDTKGVCPLDRQTWV 81 (88)
T ss_pred eEEEEecchHH-HHHHHHHHHhhCCCCCCCCceeE
Confidence 34455899999 99999999998899999998753
No 187
>PF11793 FANCL_C: FANCL C-terminal domain; PDB: 3K1L_A.
Probab=93.20 E-value=0.022 Score=42.58 Aligned_cols=46 Identities=33% Similarity=0.806 Sum_probs=21.7
Q ss_pred ccccccccccCC------ceEEe--CCCCchhhHHhHHHHhcc----C-------Ccccccccccc
Q 010517 454 SSSCVICWEAPV------EGACV--PCGHMAGCMSCLSEIKAK----K-------GDCPVCRTKIN 500 (508)
Q Consensus 454 ~~~C~iC~~~~~------~~~~~--pCgH~~~C~~C~~~~~~~----~-------~~CP~Cr~~i~ 500 (508)
+.+|.||+...- +.+.- .|++.| ...|+..|-.. + +.||.|+++|.
T Consensus 2 ~~~C~IC~~~~~~~~~~p~~~C~n~~C~~~f-H~~CL~~wf~~~~~~~~~~~~~~G~CP~C~~~i~ 66 (70)
T PF11793_consen 2 ELECGICYSYRLDDGEIPDVVCPNPSCGKKF-HLLCLSEWFLSLEKSRQSFIPIFGECPYCSSPIS 66 (70)
T ss_dssp --S-SSS--SS-TT-----B--S-TT----B--SGGGHHHHHHHHSSS-TTT--EEE-TTT-SEEE
T ss_pred CCCCCcCCcEecCCCCcCceEcCCcccCCHH-HHHHHHHHHHHcccCCeeecccccCCcCCCCeee
Confidence 368999998632 23333 788888 89998888542 1 25999999985
No 188
>PF05883 Baculo_RING: Baculovirus U-box/Ring-like domain; InterPro: IPR008573 This family consists of several Baculovirus proteins of around 130 residues in length. The function of this family is unknown, but it appears to be related to the U-box and ring finger domain by profile-profile comparison.
Probab=92.78 E-value=0.089 Score=44.03 Aligned_cols=32 Identities=25% Similarity=0.534 Sum_probs=27.0
Q ss_pred cccccccccCCc---eEEeCCC------CchhhHHhHHHHhc
Q 010517 455 SSCVICWEAPVE---GACVPCG------HMAGCMSCLSEIKA 487 (508)
Q Consensus 455 ~~C~iC~~~~~~---~~~~pCg------H~~~C~~C~~~~~~ 487 (508)
.+|.||+++.-+ +|.++|| |+| |.+|..+|.+
T Consensus 27 ~EC~IC~~~I~~~~GvV~vt~~g~lnLEkmf-c~~C~~rw~~ 67 (134)
T PF05883_consen 27 VECQICFDRIDNNDGVVYVTDGGTLNLEKMF-CADCDKRWRR 67 (134)
T ss_pred eeehhhhhhhhcCCCEEEEecCCeehHHHHH-HHHHHHHHHh
Confidence 699999998654 7778998 777 9999999954
No 189
>KOG0826 consensus Predicted E3 ubiquitin ligase involved in peroxisome organization [Posttranslational modification, protein turnover, chaperones]
Probab=92.52 E-value=0.074 Score=50.90 Aligned_cols=54 Identities=22% Similarity=0.544 Sum_probs=40.9
Q ss_pred CccccccccccCCceE-EeCCCCchhhHHhHHHHhccCCccccccccc--cceeEeee
Q 010517 453 SSSSCVICWEAPVEGA-CVPCGHMAGCMSCLSEIKAKKGDCPVCRTKI--NQVIRLYT 507 (508)
Q Consensus 453 ~~~~C~iC~~~~~~~~-~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i--~~~i~i~~ 507 (508)
+...|+||+....+.. +.-.|-+| |+.|+-.-....+.||+-..|+ .+.+|+|.
T Consensus 299 ~~~~CpvClk~r~Nptvl~vSGyVf-CY~Ci~~Yv~~~~~CPVT~~p~~v~~l~rl~~ 355 (357)
T KOG0826|consen 299 DREVCPVCLKKRQNPTVLEVSGYVF-CYPCIFSYVVNYGHCPVTGYPASVDHLIRLFN 355 (357)
T ss_pred ccccChhHHhccCCCceEEecceEE-eHHHHHHHHHhcCCCCccCCcchHHHHHHHhc
Confidence 4479999998866544 44668888 9999998777678899976665 46777763
No 190
>KOG2660 consensus Locus-specific chromosome binding proteins [Function unknown]
Probab=92.48 E-value=0.037 Score=53.17 Aligned_cols=50 Identities=24% Similarity=0.603 Sum_probs=41.6
Q ss_pred cccccccccCCceEEe-CCCCchhhHHhHHHHhccCCccccccccccceeEe
Q 010517 455 SSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRL 505 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~i~i 505 (508)
..|.+|-.-+.+..-+ -|-|.| |..|+.+-......||.|...|-+...+
T Consensus 16 itC~LC~GYliDATTI~eCLHTF-CkSCivk~l~~~~~CP~C~i~ih~t~pl 66 (331)
T KOG2660|consen 16 ITCRLCGGYLIDATTITECLHTF-CKSCIVKYLEESKYCPTCDIVIHKTHPL 66 (331)
T ss_pred eehhhccceeecchhHHHHHHHH-HHHHHHHHHHHhccCCccceeccCcccc
Confidence 6899999888766543 799999 9999988777788999999988877644
No 191
>KOG1814 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=92.39 E-value=0.071 Score=52.65 Aligned_cols=31 Identities=35% Similarity=0.829 Sum_probs=25.9
Q ss_pred cccccccccCC---ceEEeCCCCchhhHHhHHHHh
Q 010517 455 SSCVICWEAPV---EGACVPCGHMAGCMSCLSEIK 486 (508)
Q Consensus 455 ~~C~iC~~~~~---~~~~~pCgH~~~C~~C~~~~~ 486 (508)
..|.||++... ..+++||+|+| |..|....-
T Consensus 185 f~C~ICf~e~~G~~c~~~lpC~Hv~-Ck~C~kdY~ 218 (445)
T KOG1814|consen 185 FDCCICFEEQMGQHCFKFLPCSHVF-CKSCLKDYF 218 (445)
T ss_pred ccceeeehhhcCcceeeecccchHH-HHHHHHHHH
Confidence 58999999864 46788999999 999987743
No 192
>COG5219 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=92.22 E-value=0.065 Score=58.01 Aligned_cols=47 Identities=28% Similarity=0.750 Sum_probs=36.5
Q ss_pred Ccccccccccc-------CCceEEeCCCCchhhHHhHHHHhcc--CCcccccccccc
Q 010517 453 SSSSCVICWEA-------PVEGACVPCGHMAGCMSCLSEIKAK--KGDCPVCRTKIN 500 (508)
Q Consensus 453 ~~~~C~iC~~~-------~~~~~~~pCgH~~~C~~C~~~~~~~--~~~CP~Cr~~i~ 500 (508)
...+|.||+.. .....+-.|.|.| ...|.-+|-+. +..||+||..|.
T Consensus 1468 G~eECaICYsvL~~vdr~lPskrC~TCknKF-H~~CLyKWf~Ss~~s~CPlCRseit 1523 (1525)
T COG5219 1468 GHEECAICYSVLDMVDRSLPSKRCATCKNKF-HTRCLYKWFASSARSNCPLCRSEIT 1523 (1525)
T ss_pred CcchhhHHHHHHHHHhccCCccccchhhhhh-hHHHHHHHHHhcCCCCCCccccccc
Confidence 44699999864 2344455799999 99999999776 357999998775
No 193
>PF11789 zf-Nse: Zinc-finger of the MIZ type in Nse subunit; PDB: 2YU4_A 3HTK_C.
Probab=92.17 E-value=0.11 Score=37.05 Aligned_cols=39 Identities=21% Similarity=0.381 Sum_probs=28.4
Q ss_pred cccccccccCCceEEe-CCCCchhhHHhHHHHhcc--CCcccc
Q 010517 455 SSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAK--KGDCPV 494 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~--~~~CP~ 494 (508)
..|+|.+..+.++|.- .|||.| ..+.+..+-.. ...||+
T Consensus 12 ~~CPiT~~~~~~PV~s~~C~H~f-ek~aI~~~i~~~~~~~CPv 53 (57)
T PF11789_consen 12 LKCPITLQPFEDPVKSKKCGHTF-EKEAILQYIQRNGSKRCPV 53 (57)
T ss_dssp SB-TTTSSB-SSEEEESSS--EE-EHHHHHHHCTTTS-EE-SC
T ss_pred cCCCCcCChhhCCcCcCCCCCee-cHHHHHHHHHhcCCCCCCC
Confidence 6899999999999875 999999 99999998733 347998
No 194
>KOG1428 consensus Inhibitor of type V adenylyl cyclases/Neuronal presynaptic protein Highwire/PAM/RPM-1 [Signal transduction mechanisms]
Probab=91.54 E-value=0.17 Score=57.14 Aligned_cols=50 Identities=24% Similarity=0.763 Sum_probs=39.0
Q ss_pred CCcccccccccc---CCceEEeCCCCchhhHHhHHHHhccCC----------ccccccccccce
Q 010517 452 GSSSSCVICWEA---PVEGACVPCGHMAGCMSCLSEIKAKKG----------DCPVCRTKINQV 502 (508)
Q Consensus 452 ~~~~~C~iC~~~---~~~~~~~pCgH~~~C~~C~~~~~~~~~----------~CP~Cr~~i~~~ 502 (508)
+.+.+|+||+.. ..-.+.+.|+|+| ...|..++...++ .||+|..+|...
T Consensus 3484 D~DDmCmICFTE~L~AAP~IqL~C~HiF-HlqC~R~vLE~RW~GPRItF~FisCPiC~n~InH~ 3546 (3738)
T KOG1428|consen 3484 DADDMCMICFTEALSAAPAIQLDCSHIF-HLQCCRRVLENRWLGPRITFGFISCPICKNKINHI 3546 (3738)
T ss_pred ccCceEEEEehhhhCCCcceecCCccch-hHHHHHHHHHhcccCCeeEEeeeecccccchhhhH
Confidence 345799999976 3556678999999 9999888765432 499999998753
No 195
>PF03854 zf-P11: P-11 zinc finger; InterPro: IPR003224 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The RING-finger is a specialised type of Zn-finger of 40 to 60 residues that binds two atoms of zinc, and is probably involved in mediating protein-protein interactions [, , ]. There are two different variants, the C3HC4-type and a C3H2C3-type, which is clearly related despite the different cysteine/histidine pattern. The latter type is sometimes referred to as 'RING-H2 finger'. The RING domain is a protein interaction domain which has been implicated in a range of diverse biological processes. Several 3D-structures for RING-fingers are known [, ]. The 3D structure of the zinc ligation system is unique to the RING domain and is referred to as the 'cross-brace' motif. The spacing of the cysteines in such a domain is: C-x(2)-C-x(9 to 39)-C-x(1 to 3)-H-x(2 to 3)-C-x(2)-C-x(4 to 48)-C-x(2)-C Metal ligand pairs one and three co-ordinate to bind one zinc ion, whilst pairs two and four bind the second. This entry represents RING finger protein Z, a small polypeptide found in some negative-strand RNA viruses including Lassa fever virus, which plays a crucial role in virion assembly and budding. RING finger Z has been shown to interact with several host proteins, including promyelocytic leukemia protein and the eukaryotic translation initiation factor 4E [, ]. It is sufficient in the absence of any other viral proteins to release virus-like particles from the infected cell []. This protein is also responsible for arenavirus superinfection exclusion; expression of this protein in a host cell strongly and specifically inhibits areanavirus transcription and replication []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003723 RNA binding, 0008270 zinc ion binding; PDB: 2KO5_A.
Probab=91.46 E-value=0.13 Score=34.34 Aligned_cols=46 Identities=30% Similarity=0.861 Sum_probs=25.6
Q ss_pred ccccccccCCceEEeCCC-CchhhHHhHHHHhccCCccccccccccceeE
Q 010517 456 SCVICWEAPVEGACVPCG-HMAGCMSCLSEIKAKKGDCPVCRTKINQVIR 504 (508)
Q Consensus 456 ~C~iC~~~~~~~~~~pCg-H~~~C~~C~~~~~~~~~~CP~Cr~~i~~~i~ 504 (508)
.|--|.-..... +.|. |.. |..|...|......||+|..++...++
T Consensus 4 nCKsCWf~~k~L--i~C~dHYL-Cl~CLt~ml~~s~~C~iC~~~LPtkir 50 (50)
T PF03854_consen 4 NCKSCWFANKGL--IKCSDHYL-CLNCLTLMLSRSDRCPICGKPLPTKIR 50 (50)
T ss_dssp ---SS-S--SSE--EE-SS-EE-EHHHHHHT-SSSSEETTTTEE----S-
T ss_pred cChhhhhcCCCe--eeecchhH-HHHHHHHHhccccCCCcccCcCccccC
Confidence 455565554444 4587 665 999999999888899999999876654
No 196
>KOG2932 consensus E3 ubiquitin ligase involved in ubiquitination of E-cadherin complex [Posttranslational modification, protein turnover, chaperones]
Probab=90.93 E-value=0.053 Score=51.31 Aligned_cols=44 Identities=25% Similarity=0.791 Sum_probs=29.9
Q ss_pred cccccccccCCceE--EeCCCCchhhHHhHHHHhccCCccccccccccce
Q 010517 455 SSCVICWEAPVEGA--CVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQV 502 (508)
Q Consensus 455 ~~C~iC~~~~~~~~--~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~ 502 (508)
..|.-| |.+..+. .+||.|+| |.+|+..-. .+.||.|-.+|-++
T Consensus 91 HfCd~C-d~PI~IYGRmIPCkHvF-Cl~CAr~~~--dK~Cp~C~d~VqrI 136 (389)
T KOG2932|consen 91 HFCDRC-DFPIAIYGRMIPCKHVF-CLECARSDS--DKICPLCDDRVQRI 136 (389)
T ss_pred Eeeccc-CCcceeeecccccchhh-hhhhhhcCc--cccCcCcccHHHHH
Confidence 456666 4433222 45999999 999987644 24699998777543
No 197
>COG5220 TFB3 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB3 [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
Probab=90.83 E-value=0.12 Score=47.10 Aligned_cols=44 Identities=27% Similarity=0.684 Sum_probs=32.9
Q ss_pred cccccccccc---CCceEEe--C-CCCchhhHHhHHHHhccC-Cccc--ccccc
Q 010517 454 SSSCVICWEA---PVEGACV--P-CGHMAGCMSCLSEIKAKK-GDCP--VCRTK 498 (508)
Q Consensus 454 ~~~C~iC~~~---~~~~~~~--p-CgH~~~C~~C~~~~~~~~-~~CP--~Cr~~ 498 (508)
+..|+||..- ..++.++ | |-|.. |.+|..++-... ..|| -|.+-
T Consensus 10 d~~CPvCksDrYLnPdik~linPECyHrm-CESCvdRIFs~GpAqCP~~gC~kI 62 (314)
T COG5220 10 DRRCPVCKSDRYLNPDIKILINPECYHRM-CESCVDRIFSRGPAQCPYKGCGKI 62 (314)
T ss_pred cccCCccccccccCCCeEEEECHHHHHHH-HHHHHHHHhcCCCCCCCCccHHHH
Confidence 3589999754 3455555 6 99999 999999987764 4799 78553
No 198
>KOG2113 consensus Predicted RNA binding protein, contains KH domain [General function prediction only]
Probab=89.96 E-value=0.24 Score=47.11 Aligned_cols=50 Identities=8% Similarity=-0.074 Sum_probs=41.0
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEe
Q 010517 454 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRL 505 (508)
Q Consensus 454 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~i~i 505 (508)
..+|.+|-+.....+..+|+|+.+|.+|+.. ...+.||.|..-+-..++|
T Consensus 343 ~~~~~~~~~~~~st~~~~~~~n~~~~~~a~~--s~~~~~~~c~~~~~~~~~i 392 (394)
T KOG2113|consen 343 SLKGTSAGFGLLSTIWSGGNMNLSPGSLASA--SASPTSSTCDHNDHTLVPI 392 (394)
T ss_pred hcccccccCceeeeEeecCCcccChhhhhhc--ccCCccccccccceeeeec
Confidence 3699999999999999999999999999983 2346799997755566655
No 199
>PF10272 Tmpp129: Putative transmembrane protein precursor; InterPro: IPR018801 This entry consists of proteins conserved from worms to humans. They are purported to be transmembrane protein-precursors but their function is unknown.
Probab=86.96 E-value=0.69 Score=46.00 Aligned_cols=28 Identities=39% Similarity=0.898 Sum_probs=20.7
Q ss_pred CCCchhhHHhHHHHhc-------------cCCcccccccccc
Q 010517 472 CGHMAGCMSCLSEIKA-------------KKGDCPVCRTKIN 500 (508)
Q Consensus 472 CgH~~~C~~C~~~~~~-------------~~~~CP~Cr~~i~ 500 (508)
|+-+. |.+|.-+|-. ++..||.||+.++
T Consensus 311 CRPmW-C~~Cm~kwFasrQd~~~~~~Wl~~~~~CPtCRa~FC 351 (358)
T PF10272_consen 311 CRPMW-CLECMGKWFASRQDQQHPETWLSGKCPCPTCRAKFC 351 (358)
T ss_pred ccchH-HHHHHHHHhhhcCCCCChhhhhcCCCCCCCCcccce
Confidence 55556 9999988743 2346999999976
No 200
>KOG3842 consensus Adaptor protein Pellino [Signal transduction mechanisms]
Probab=86.89 E-value=0.7 Score=44.05 Aligned_cols=53 Identities=26% Similarity=0.602 Sum_probs=33.7
Q ss_pred CCcccccccccc-------------------CCceEEeCCCCchhhHHhHHHHhcc---------CCccccccccccc--
Q 010517 452 GSSSSCVICWEA-------------------PVEGACVPCGHMAGCMSCLSEIKAK---------KGDCPVCRTKINQ-- 501 (508)
Q Consensus 452 ~~~~~C~iC~~~-------------------~~~~~~~pCgH~~~C~~C~~~~~~~---------~~~CP~Cr~~i~~-- 501 (508)
..+.+|++|+.. +.+..|-||||++ -+.=+.-|.+. ..-||.|-+.+..
T Consensus 339 ~~~r~CPmC~~~gp~V~L~lG~E~~f~vD~G~pthaF~PCGHv~-sekt~~YWs~iplPhGT~~f~a~CPFC~~~L~ge~ 417 (429)
T KOG3842|consen 339 QRERECPMCRVVGPYVPLWLGCEAGFYVDAGPPTHAFNPCGHVC-SEKTVKYWSQIPLPHGTHAFHAACPFCATQLAGEQ 417 (429)
T ss_pred cccCcCCeeeeecceeeeeccccceeEecCCCcccccCCccccc-chhhhhHhhcCcCCCccccccccCcchhhhhccCC
Confidence 346799999864 2345577999995 33334444432 1249999988863
Q ss_pred -eeEe
Q 010517 502 -VIRL 505 (508)
Q Consensus 502 -~i~i 505 (508)
+|++
T Consensus 418 ~~ikl 422 (429)
T KOG3842|consen 418 GYIKL 422 (429)
T ss_pred ceEEE
Confidence 5554
No 201
>PF04710 Pellino: Pellino; InterPro: IPR006800 Pellino is involved in Toll-like signalling pathways, and associates with the kinase domain of the Pelle Ser/Thr kinase [, , ].; PDB: 3EGB_B 3EGA_A.
Probab=86.53 E-value=0.21 Score=49.38 Aligned_cols=54 Identities=28% Similarity=0.615 Sum_probs=0.0
Q ss_pred Ccccccccccc-------------------CCceEEeCCCCchhhHHhHHHHhcc---------CCccccccccccc---
Q 010517 453 SSSSCVICWEA-------------------PVEGACVPCGHMAGCMSCLSEIKAK---------KGDCPVCRTKINQ--- 501 (508)
Q Consensus 453 ~~~~C~iC~~~-------------------~~~~~~~pCgH~~~C~~C~~~~~~~---------~~~CP~Cr~~i~~--- 501 (508)
...+|++|+.. +.+.+|.||||++ =+..+.-|.+. ...||.|-.++..
T Consensus 327 ~~r~CPlCr~~g~~V~L~mG~E~afyvD~~~pthaF~PCGHv~-SekTa~yWs~i~lPhGt~~f~a~CPFCa~~L~g~~g 405 (416)
T PF04710_consen 327 RSRTCPLCRQVGPYVPLWMGCEPAFYVDSGPPTHAFNPCGHVC-SEKTAKYWSQIPLPHGTHAFHAACPFCATPLDGEQG 405 (416)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCCCccccCCceeEeeccccceeecCCCCceeeccccccc-chhhhhhhhcCCCCCCcccccccCCcccCcccCCCC
Confidence 36799999852 3466788999997 66666666552 1359999999974
Q ss_pred eeEeee
Q 010517 502 VIRLYT 507 (508)
Q Consensus 502 ~i~i~~ 507 (508)
++||+|
T Consensus 406 ~vrLiF 411 (416)
T PF04710_consen 406 YVRLIF 411 (416)
T ss_dssp ------
T ss_pred ceEEEE
Confidence 777765
No 202
>KOG1493 consensus Anaphase-promoting complex (APC), subunit 11 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=86.48 E-value=0.26 Score=36.46 Aligned_cols=28 Identities=29% Similarity=0.694 Sum_probs=23.3
Q ss_pred CCCCchhhHHhHHHHhcc---CCccccccccc
Q 010517 471 PCGHMAGCMSCLSEIKAK---KGDCPVCRTKI 499 (508)
Q Consensus 471 pCgH~~~C~~C~~~~~~~---~~~CP~Cr~~i 499 (508)
-|.|.| -..|+.++... ...||+||+..
T Consensus 50 ~C~h~f-h~hCI~~wl~~~tsq~~CPmcRq~~ 80 (84)
T KOG1493|consen 50 YCLHAF-HAHCILKWLNTPTSQGQCPMCRQTW 80 (84)
T ss_pred HHHHHH-HHHHHHHHhcCccccccCCcchhee
Confidence 699999 99999998764 35799999865
No 203
>KOG2930 consensus SCF ubiquitin ligase, Rbx1 component [Posttranslational modification, protein turnover, chaperones]
Probab=86.15 E-value=0.57 Score=36.93 Aligned_cols=32 Identities=22% Similarity=0.419 Sum_probs=27.2
Q ss_pred ceEEeCCCCchhhHHhHHHHhccCCcccccccc
Q 010517 466 EGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTK 498 (508)
Q Consensus 466 ~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~ 498 (508)
.++---|.|.| ...|+.+|.+++..||+|.+.
T Consensus 75 ~VaWG~CNHaF-H~hCisrWlktr~vCPLdn~e 106 (114)
T KOG2930|consen 75 TVAWGVCNHAF-HFHCISRWLKTRNVCPLDNKE 106 (114)
T ss_pred EEEeeecchHH-HHHHHHHHHhhcCcCCCcCcc
Confidence 34444899999 999999999999999999764
No 204
>KOG2817 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=85.85 E-value=0.58 Score=46.38 Aligned_cols=40 Identities=23% Similarity=0.532 Sum_probs=31.0
Q ss_pred eEEeCCCCchhhHHhHHHHhccCC---cccccccccc--ceeEeee
Q 010517 467 GACVPCGHMAGCMSCLSEIKAKKG---DCPVCRTKIN--QVIRLYT 507 (508)
Q Consensus 467 ~~~~pCgH~~~C~~C~~~~~~~~~---~CP~Cr~~i~--~~i~i~~ 507 (508)
++-+.|||+. |.+-+.+|.+... +||+|-.... +..|||+
T Consensus 350 Pm~L~CGHVI-SkdAlnrLS~ng~~sfKCPYCP~e~~~~~~kql~F 394 (394)
T KOG2817|consen 350 PMMLICGHVI-SKDALNRLSKNGSQSFKCPYCPVEQLASDTKQLYF 394 (394)
T ss_pred Ceeeecccee-cHHHHHHHhhCCCeeeeCCCCCcccCHHhcccccC
Confidence 5567899999 9999999987533 7999976553 5777764
No 205
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=85.14 E-value=5.3 Score=35.62 Aligned_cols=113 Identities=19% Similarity=0.128 Sum_probs=75.4
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHH----HHHHHcCCCCcccCCCCCCCcHHH
Q 010517 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVA----KTLIELGANINAYRPGGRGGTPLH 91 (508)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v----~~Ll~~ga~~n~~~~d~~g~tpLh 91 (508)
..++.+-.||+..+.++|+++-+ ++... +-.+-.-+|..+ .+.++. +++..+...-...|++.--..-|.
T Consensus 75 ~~q~LFElAC~~qkydiV~WI~q---nL~i~--~~~~iFdIA~~~-kDlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~ 148 (192)
T PF03158_consen 75 LNQELFELACEEQKYDIVKWIGQ---NLHIY--NPEDIFDIAFAK-KDLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLE 148 (192)
T ss_pred HHHHHHHHHHHHccccHHHHHhh---ccCCC--Cchhhhhhhhhc-cchhHHHHHHHHHHhhcccccccCHHHHHHHHHH
Confidence 45788899999999999999933 32222 223555567665 665542 223333221111111111123477
Q ss_pred HHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHH
Q 010517 92 HAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIES 140 (508)
Q Consensus 92 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~ 140 (508)
.|+..|....|.-.+++|.+++. +.|..|+..+|..++.+++.
T Consensus 149 ~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 149 KAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 89999999999999999987653 79999999999999998864
No 206
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=84.92 E-value=2.2 Score=32.26 Aligned_cols=47 Identities=21% Similarity=0.142 Sum_probs=29.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHc
Q 010517 19 ELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIEL 73 (508)
Q Consensus 19 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ 73 (508)
.-|..|+..|+.++++.+++.+ .++ ...|..|+.. .+.+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~-H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKS-HNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHH-hhHHHHHHHHHh
Confidence 4556777777777777766543 111 3456666665 666777777665
No 207
>PHA02862 5L protein; Provisional
Probab=84.68 E-value=0.86 Score=38.47 Aligned_cols=45 Identities=29% Similarity=0.521 Sum_probs=35.1
Q ss_pred cccccccccCCceEEeCCCC----chhhHHhHHHHhcc--CCcccccccccc
Q 010517 455 SSCVICWEAPVEGACVPCGH----MAGCMSCLSEIKAK--KGDCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCgH----~~~C~~C~~~~~~~--~~~CP~Cr~~i~ 500 (508)
..|=||++...+. ..||+. .++..+|..+|-.. +..|++|+.+..
T Consensus 3 diCWIC~~~~~e~-~~PC~C~GS~K~VHq~CL~~WIn~S~k~~CeLCkteY~ 53 (156)
T PHA02862 3 DICWICNDVCDER-NNFCGCNEEYKVVHIKCMQLWINYSKKKECNLCKTKYN 53 (156)
T ss_pred CEEEEecCcCCCC-cccccccCcchhHHHHHHHHHHhcCCCcCccCCCCeEE
Confidence 5899999986544 479985 45589999999865 357999998774
No 208
>PF10367 Vps39_2: Vacuolar sorting protein 39 domain 2; InterPro: IPR019453 This entry represents a domain found in the vacuolar sorting protein Vps39 and transforming growth factor beta receptor-associated protein Trap1. Vps39, a component of the C-Vps complex, is thought to be required for the fusion of endosomes and other types of transport intermediates with the vacuole [, ]. In Saccharomyces cerevisiae (Baker's yeast), Vps39 has been shown to stimulate nucleotide exchange []. Trap1 plays a role in the TGF-beta/activin signaling pathway. It associates with inactive heteromeric TGF-beta and activin receptor complexes, mainly through the type II receptor, and is released upon activation of signaling [, ]. The precise function of this domain has not been characterised In Vps39 this domain is involved in localisation and in mediating the interactions with Vps11 [].
Probab=84.07 E-value=0.4 Score=39.08 Aligned_cols=29 Identities=31% Similarity=0.814 Sum_probs=22.8
Q ss_pred ccccccccccCCce--EEeCCCCchhhHHhHH
Q 010517 454 SSSCVICWEAPVEG--ACVPCGHMAGCMSCLS 483 (508)
Q Consensus 454 ~~~C~iC~~~~~~~--~~~pCgH~~~C~~C~~ 483 (508)
...|.||....... ++.||||.+ +..|..
T Consensus 78 ~~~C~vC~k~l~~~~f~~~p~~~v~-H~~C~~ 108 (109)
T PF10367_consen 78 STKCSVCGKPLGNSVFVVFPCGHVV-HYSCIK 108 (109)
T ss_pred CCCccCcCCcCCCceEEEeCCCeEE-eccccc
Confidence 36899999986544 455999999 999965
No 209
>PHA03096 p28-like protein; Provisional
Probab=83.82 E-value=0.68 Score=44.73 Aligned_cols=44 Identities=20% Similarity=0.216 Sum_probs=31.4
Q ss_pred cccccccccCC--------ceEEeCCCCchhhHHhHHHHhccC------Cccccccccc
Q 010517 455 SSCVICWEAPV--------EGACVPCGHMAGCMSCLSEIKAKK------GDCPVCRTKI 499 (508)
Q Consensus 455 ~~C~iC~~~~~--------~~~~~pCgH~~~C~~C~~~~~~~~------~~CP~Cr~~i 499 (508)
-.|.||||... ...+-.|.|.| |..|...|...+ +.||.||..+
T Consensus 179 k~c~ic~e~~~~k~~~~~~fgil~~c~h~f-c~~ci~~wr~~~~~~e~~~~c~~~~~~~ 236 (284)
T PHA03096 179 KICGICLENIKAKYIIKKYYGILSEIKHEF-NIFCIKIWMTESLYKETEPENRRLNTVI 236 (284)
T ss_pred hhcccchhhhhhhccccccccccccCCcHH-HHHHHHHHHHhhhhcccCccccchhhHH
Confidence 48999999732 23445899999 999999987642 3466665544
No 210
>KOG4445 consensus Uncharacterized conserved protein, contains RWD domain [Function unknown]
Probab=82.81 E-value=0.61 Score=44.19 Aligned_cols=45 Identities=31% Similarity=0.731 Sum_probs=31.6
Q ss_pred cccccccccCCc---eEEeCCCCchhhHHhHHHHhc------------------c-----CCcccccccccc
Q 010517 455 SSCVICWEAPVE---GACVPCGHMAGCMSCLSEIKA------------------K-----KGDCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~~~~---~~~~pCgH~~~C~~C~~~~~~------------------~-----~~~CP~Cr~~i~ 500 (508)
..|+||+--+.+ ....+|-|.+ ...|..+... . +-.||+||..|.
T Consensus 116 gqCvICLygfa~~~~ft~T~C~Hy~-H~~ClaRyl~~~~~~lrqe~q~~~~~~qh~~~~~eavcpVcre~i~ 186 (368)
T KOG4445|consen 116 GQCVICLYGFASSPAFTVTACDHYM-HFACLARYLTECLTGLRQEIQDAQKERQHMKEQVEAVCPVCRERIK 186 (368)
T ss_pred CceEEEEEeecCCCceeeehhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhhhhHhhhhcc
Confidence 578888766543 4456999999 8888665422 0 124999999985
No 211
>PHA02825 LAP/PHD finger-like protein; Provisional
Probab=82.49 E-value=1.4 Score=38.09 Aligned_cols=47 Identities=21% Similarity=0.383 Sum_probs=35.4
Q ss_pred CccccccccccCCceEEeCCCCc----hhhHHhHHHHhccC--Ccccccccccc
Q 010517 453 SSSSCVICWEAPVEGACVPCGHM----AGCMSCLSEIKAKK--GDCPVCRTKIN 500 (508)
Q Consensus 453 ~~~~C~iC~~~~~~~~~~pCgH~----~~C~~C~~~~~~~~--~~CP~Cr~~i~ 500 (508)
.+..|-||++.... ...||... ++..+|..+|-..+ ..|++|+.+..
T Consensus 7 ~~~~CRIC~~~~~~-~~~PC~CkGs~k~VH~sCL~rWi~~s~~~~CeiC~~~Y~ 59 (162)
T PHA02825 7 MDKCCWICKDEYDV-VTNYCNCKNENKIVHKECLEEWINTSKNKSCKICNGPYN 59 (162)
T ss_pred CCCeeEecCCCCCC-ccCCcccCCCchHHHHHHHHHHHhcCCCCcccccCCeEE
Confidence 34699999998653 34688852 45899999998753 57999998874
No 212
>COG5222 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=81.30 E-value=0.86 Score=43.06 Aligned_cols=42 Identities=24% Similarity=0.561 Sum_probs=33.6
Q ss_pred cccccccccCCceEEe-CCCCchhhHHhHHHHh-ccCCccccccc
Q 010517 455 SSCVICWEAPVEGACV-PCGHMAGCMSCLSEIK-AKKGDCPVCRT 497 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~-~~~~~CP~Cr~ 497 (508)
..|+.|....+.++-. -|+|.| |.+|+.... ...-.||.|..
T Consensus 275 LkCplc~~Llrnp~kT~cC~~~f-c~eci~~al~dsDf~CpnC~r 318 (427)
T COG5222 275 LKCPLCHCLLRNPMKTPCCGHTF-CDECIGTALLDSDFKCPNCSR 318 (427)
T ss_pred ccCcchhhhhhCcccCccccchH-HHHHHhhhhhhccccCCCccc
Confidence 6899999988888777 578999 999988643 33457999976
No 213
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=80.98 E-value=2.9 Score=31.63 Aligned_cols=19 Identities=11% Similarity=-0.031 Sum_probs=8.8
Q ss_pred HHHHHHHhCCHHHHHHHHH
Q 010517 122 ALGVARIKGHINVVRAIES 140 (508)
Q Consensus 122 pLh~A~~~g~~~~v~~Ll~ 140 (508)
.|..|+...+.+++++|++
T Consensus 35 ~l~~AI~~H~n~i~~~l~~ 53 (76)
T PF11929_consen 35 CLEYAIKSHNNEIADWLIE 53 (76)
T ss_pred HHHHHHHHhhHHHHHHHHH
Confidence 3444444444444444443
No 214
>KOG1941 consensus Acetylcholine receptor-associated protein of the synapse (rapsyn) [Extracellular structures]
Probab=80.53 E-value=0.69 Score=45.44 Aligned_cols=45 Identities=31% Similarity=0.692 Sum_probs=35.4
Q ss_pred ccccccccc----CCceEEeCCCCchhhHHhHHHHhccC--Ccccccccccc
Q 010517 455 SSCVICWEA----PVEGACVPCGHMAGCMSCLSEIKAKK--GDCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~----~~~~~~~pCgH~~~C~~C~~~~~~~~--~~CP~Cr~~i~ 500 (508)
.-|..|-+. +...-.+||.|.| ...|+..+...+ ..||-||+-++
T Consensus 366 L~Cg~CGe~~Glk~e~LqALpCsHIf-H~rCl~e~L~~n~~rsCP~CrklrS 416 (518)
T KOG1941|consen 366 LYCGLCGESIGLKNERLQALPCSHIF-HLRCLQEILENNGTRSCPNCRKLRS 416 (518)
T ss_pred hhhhhhhhhhcCCcccccccchhHHH-HHHHHHHHHHhCCCCCCccHHHHHh
Confidence 589999886 4455567999999 999999876554 57999996544
No 215
>KOG2113 consensus Predicted RNA binding protein, contains KH domain [General function prediction only]
Probab=78.44 E-value=0.54 Score=44.79 Aligned_cols=52 Identities=13% Similarity=0.258 Sum_probs=42.3
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhccC-CccccccccccceeEe
Q 010517 454 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK-GDCPVCRTKINQVIRL 505 (508)
Q Consensus 454 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~-~~CP~Cr~~i~~~i~i 505 (508)
...|.+|++.......++|+|.++|..|......++ +.|++|...+.+...|
T Consensus 136 ti~~iqq~tnt~I~T~v~~~~~Vf~Vtg~~~nC~kra~s~eie~ta~~ra~~i 188 (394)
T KOG2113|consen 136 TIKRIQQFTNTYIATPVRCGEPVFCVTGAPKNCVKRARSCEIEQTAVTRAGQI 188 (394)
T ss_pred ccchheecccceEeeeccCCCceEEEecCCcchhhhccccchhhhhhhhhhcc
Confidence 368999999999899999999999999987775544 4599998776665554
No 216
>KOG3161 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=76.51 E-value=1.2 Score=46.69 Aligned_cols=36 Identities=31% Similarity=0.754 Sum_probs=29.2
Q ss_pred cccccccccC----CceEEeCCCCchhhHHhHHHHhccCCccc
Q 010517 455 SSCVICWEAP----VEGACVPCGHMAGCMSCLSEIKAKKGDCP 493 (508)
Q Consensus 455 ~~C~iC~~~~----~~~~~~pCgH~~~C~~C~~~~~~~~~~CP 493 (508)
..|.||+..+ ..++++-|||.. |..|+..+... .||
T Consensus 12 l~c~ic~n~f~~~~~~Pvsl~cghti-c~~c~~~lyn~--scp 51 (861)
T KOG3161|consen 12 LLCDICLNLFVVQRLEPVSLQCGHTI-CGHCVQLLYNA--SCP 51 (861)
T ss_pred hhchHHHHHHHHHhcCcccccccchH-HHHHHHhHhhc--cCC
Confidence 5899997653 467888999999 99999998764 477
No 217
>KOG4362 consensus Transcriptional regulator BRCA1 [Replication, recombination and repair; Transcription]
Probab=74.32 E-value=0.92 Score=48.53 Aligned_cols=47 Identities=26% Similarity=0.622 Sum_probs=38.7
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhcc---CCccccccccccc
Q 010517 454 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK---KGDCPVCRTKINQ 501 (508)
Q Consensus 454 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~---~~~CP~Cr~~i~~ 501 (508)
..+|.||.....+.+.+.|-|.| |..|....... ...||+|+..+.+
T Consensus 21 ~lEc~ic~~~~~~p~~~kc~~~~-l~~~~n~~f~~~~~~~~~~lc~~~~eK 70 (684)
T KOG4362|consen 21 ILECPICLEHVKEPSLLKCDHIF-LKFCLNKLFESKKGPKQCALCKSDIEK 70 (684)
T ss_pred hccCCceeEEeeccchhhhhHHH-HhhhhhceeeccCccccchhhhhhhhh
Confidence 36999999999988999999999 99998875543 2469999977653
No 218
>KOG4217 consensus Nuclear receptors of the nerve growth factor-induced protein B type [Transcription]
Probab=72.71 E-value=16 Score=37.25 Aligned_cols=31 Identities=23% Similarity=0.592 Sum_probs=21.3
Q ss_pred CCCCccccccccccCCceEEeCCCCchh--hHHhHHHHh
Q 010517 450 DDGSSSSCVICWEAPVEGACVPCGHMAG--CMSCLSEIK 486 (508)
Q Consensus 450 ~~~~~~~C~iC~~~~~~~~~~pCgH~~~--C~~C~~~~~ 486 (508)
....+..|.||-|+.. |.|.-+ |+-|---.+
T Consensus 265 ~~~~e~~CAVCgDnAa------CqHYGvRTCEGCKGFFK 297 (605)
T KOG4217|consen 265 SLSAEGLCAVCGDNAA------CQHYGVRTCEGCKGFFK 297 (605)
T ss_pred CCCccceeeecCChHH------hhhcCccccccchHHHH
Confidence 3445689999999875 777543 888844433
No 219
>KOG3113 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.15 E-value=5.6 Score=36.98 Aligned_cols=50 Identities=30% Similarity=0.350 Sum_probs=34.2
Q ss_pred Ccccccccc----ccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccc--ceeEe
Q 010517 453 SSSSCVICW----EAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN--QVIRL 505 (508)
Q Consensus 453 ~~~~C~iC~----~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~--~~i~i 505 (508)
....|+|-- +..+-.++.+|||+| =..-...++. ..|++|.+.+. ++|.|
T Consensus 110 a~fiCPvtgleMng~~~F~~l~~CGcV~-SerAlKeika--s~C~~C~a~y~~~dvIvl 165 (293)
T KOG3113|consen 110 ARFICPVTGLEMNGKYRFCALRCCGCVF-SERALKEIKA--SVCHVCGAAYQEDDVIVL 165 (293)
T ss_pred ceeecccccceecceEEEEEEeccceec-cHHHHHHhhh--ccccccCCcccccCeEee
Confidence 336888843 235566777999999 6666666553 46999999986 35544
No 220
>PF04216 FdhE: Protein involved in formate dehydrogenase formation; InterPro: IPR006452 This family of sequences describe an accessory protein required for the assembly of formate dehydrogenase of certain proteobacteria although not present in the final complex []. The exact nature of the function of FdhE in the assembly of the complex is unknown, but considering the presence of selenocysteine, molybdopterin, iron-sulphur clusters and cytochrome b556, it is likely to be involved in the insertion of cofactors. ; GO: 0005737 cytoplasm; PDB: 2FIY_B.
Probab=71.23 E-value=1 Score=43.98 Aligned_cols=51 Identities=22% Similarity=0.510 Sum_probs=25.8
Q ss_pred cccccccccCCceEEeCC---C--CchhhHHhHHHHhccCCccccccccccceeEee
Q 010517 455 SSCVICWEAPVEGACVPC---G--HMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLY 506 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pC---g--H~~~C~~C~~~~~~~~~~CP~Cr~~i~~~i~i~ 506 (508)
..|+||-..+.-.++..= | |.+ |..|...|...+..||.|-..-...+..|
T Consensus 173 g~CPvCGs~P~~s~l~~~~~~G~R~L~-Cs~C~t~W~~~R~~Cp~Cg~~~~~~l~~~ 228 (290)
T PF04216_consen 173 GYCPVCGSPPVLSVLRGGEREGKRYLH-CSLCGTEWRFVRIKCPYCGNTDHEKLEYF 228 (290)
T ss_dssp SS-TTT---EEEEEEE------EEEEE-ETTT--EEE--TTS-TTT---SS-EEE--
T ss_pred CcCCCCCCcCceEEEecCCCCccEEEE-cCCCCCeeeecCCCCcCCCCCCCcceeeE
Confidence 699999999877776654 3 445 99999999888888999977655444443
No 221
>KOG2068 consensus MOT2 transcription factor [Transcription]
Probab=70.70 E-value=2.6 Score=40.99 Aligned_cols=46 Identities=35% Similarity=0.795 Sum_probs=35.9
Q ss_pred cccccccccC----CceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010517 455 SSCVICWEAP----VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 501 (508)
Q Consensus 455 ~~C~iC~~~~----~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~ 501 (508)
..|+||.+.. ...+-.||+|.. |..|...+......||.||++...
T Consensus 250 ~s~p~~~~~~~~~d~~~lP~~~~~~~-~l~~~~t~~~~~~~~~~~rk~~~~ 299 (327)
T KOG2068|consen 250 PSCPICYEDLDLTDSNFLPCPCGFRL-CLFCHKTISDGDGRCPGCRKPYER 299 (327)
T ss_pred CCCCCCCCcccccccccccccccccc-hhhhhhcccccCCCCCccCCcccc
Confidence 4789998843 233334788996 999999999888899999988764
No 222
>PF02891 zf-MIZ: MIZ/SP-RING zinc finger; InterPro: IPR004181 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents MIZ-type zinc finger domains. Miz1 (Msx-interacting-zinc finger) is a zinc finger-containing protein with homology to the yeast protein, Nfi-1. Miz1 is a sequence specific DNA binding protein that can function as a positive-acting transcription factor. Miz1 binds to the homeobox protein Msx2, enhancing the specific DNA-binding ability of Msx2 []. Other proteins containing this domain include the human pias family (protein inhibitor of activated STAT protein). More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 3I2D_A.
Probab=69.09 E-value=3.3 Score=28.54 Aligned_cols=43 Identities=21% Similarity=0.510 Sum_probs=20.5
Q ss_pred cccccccccCCceEE-eCCCCchhhHHhHHHHhc----cCCcccccccc
Q 010517 455 SSCVICWEAPVEGAC-VPCGHMAGCMSCLSEIKA----KKGDCPVCRTK 498 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~-~pCgH~~~C~~C~~~~~~----~~~~CP~Cr~~ 498 (508)
..|++...+...++- ..|.|.- |++=..-+.. ..+.||+|.++
T Consensus 3 L~CPls~~~i~~P~Rg~~C~H~~-CFDl~~fl~~~~~~~~W~CPiC~~~ 50 (50)
T PF02891_consen 3 LRCPLSFQRIRIPVRGKNCKHLQ-CFDLESFLESNQRTPKWKCPICNKP 50 (50)
T ss_dssp SB-TTTSSB-SSEEEETT--SS---EEHHHHHHHHHHS---B-TTT---
T ss_pred eeCCCCCCEEEeCccCCcCcccc-eECHHHHHHHhhccCCeECcCCcCc
Confidence 479999988877774 4899997 7654333322 23579999864
No 223
>PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A.
Probab=68.18 E-value=4.2 Score=30.51 Aligned_cols=45 Identities=29% Similarity=0.620 Sum_probs=18.0
Q ss_pred cccccccccCC-------ceEEeCCCCchhhHHhHHHH-hccCCcccccccccc
Q 010517 455 SSCVICWEAPV-------EGACVPCGHMAGCMSCLSEI-KAKKGDCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~~~-------~~~~~pCgH~~~C~~C~~~~-~~~~~~CP~Cr~~i~ 500 (508)
..|.||-|..- -++..-|+--+ |..|.+-= +..+..||.|+.+..
T Consensus 10 qiCqiCGD~VGl~~~Ge~FVAC~eC~fPv-Cr~CyEYErkeg~q~CpqCkt~yk 62 (80)
T PF14569_consen 10 QICQICGDDVGLTENGEVFVACHECAFPV-CRPCYEYERKEGNQVCPQCKTRYK 62 (80)
T ss_dssp -B-SSS--B--B-SSSSB--S-SSS------HHHHHHHHHTS-SB-TTT--B--
T ss_pred cccccccCccccCCCCCEEEEEcccCCcc-chhHHHHHhhcCcccccccCCCcc
Confidence 68999998632 12233555555 99997763 334678999998765
No 224
>KOG1940 consensus Zn-finger protein [General function prediction only]
Probab=67.36 E-value=1.7 Score=41.46 Aligned_cols=48 Identities=25% Similarity=0.610 Sum_probs=37.4
Q ss_pred ccccccccc----CCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeE
Q 010517 455 SSCVICWEA----PVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIR 504 (508)
Q Consensus 455 ~~C~iC~~~----~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~i~ 504 (508)
..|+||.+. ...+..++|||.. -..|...+....=.||+|.+ +..+..
T Consensus 159 ~ncPic~e~l~~s~~~~~~~~CgH~~-h~~cf~e~~~~~y~CP~C~~-~~d~~~ 210 (276)
T KOG1940|consen 159 FNCPICKEYLFLSFEDAGVLKCGHYM-HSRCFEEMICEGYTCPICSK-PGDMSH 210 (276)
T ss_pred CCCchhHHHhccccccCCccCcccch-HHHHHHHHhccCCCCCcccc-hHHHHH
Confidence 459999986 5677788999999 78998887766567999988 654433
No 225
>KOG3899 consensus Uncharacterized conserved protein [Function unknown]
Probab=67.20 E-value=3.4 Score=39.09 Aligned_cols=28 Identities=36% Similarity=0.888 Sum_probs=22.0
Q ss_pred CCCchhhHHhHHHHhc-------------cCCcccccccccc
Q 010517 472 CGHMAGCMSCLSEIKA-------------KKGDCPVCRTKIN 500 (508)
Q Consensus 472 CgH~~~C~~C~~~~~~-------------~~~~CP~Cr~~i~ 500 (508)
|+-+. |.+|..+|-. ++..||.||+.++
T Consensus 325 crp~w-c~~cla~~f~~rq~~v~r~~~~~~~~~cp~cr~~fc 365 (381)
T KOG3899|consen 325 CRPLW-CRSCLAQIFIGRQDNVYRYEYHRGSAQCPTCRKNFC 365 (381)
T ss_pred cccHH-HHHHHHHHHhhcccchhHHHHHhcCCCCcchhhceE
Confidence 67777 9999988743 3446999999886
No 226
>PRK03564 formate dehydrogenase accessory protein FdhE; Provisional
Probab=66.80 E-value=2.4 Score=41.44 Aligned_cols=44 Identities=25% Similarity=0.468 Sum_probs=32.9
Q ss_pred ccccccccccCCceEEe---CCCCchh-hHHhHHHHhccCCccccccc
Q 010517 454 SSSCVICWEAPVEGACV---PCGHMAG-CMSCLSEIKAKKGDCPVCRT 497 (508)
Q Consensus 454 ~~~C~iC~~~~~~~~~~---pCgH~~~-C~~C~~~~~~~~~~CP~Cr~ 497 (508)
...|+||-..+...++. .=|+++. |..|...|...+..||.|..
T Consensus 187 ~~~CPvCGs~P~~s~v~~~~~~G~RyL~CslC~teW~~~R~~C~~Cg~ 234 (309)
T PRK03564 187 RQFCPVCGSMPVSSVVQIGTTQGLRYLHCNLCESEWHVVRVKCSNCEQ 234 (309)
T ss_pred CCCCCCCCCcchhheeeccCCCCceEEEcCCCCCcccccCccCCCCCC
Confidence 36999999988655432 2343332 99999999888888999976
No 227
>KOG4185 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=66.60 E-value=3.1 Score=40.74 Aligned_cols=31 Identities=32% Similarity=0.853 Sum_probs=25.4
Q ss_pred EEeCCCCchhhHHhHHHHhcc-CCccccccccc
Q 010517 468 ACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKI 499 (508)
Q Consensus 468 ~~~pCgH~~~C~~C~~~~~~~-~~~CP~Cr~~i 499 (508)
..+.|||.+ |..|+..+... ...||.||.+.
T Consensus 23 ~~l~c~h~~-c~~c~~~l~~~~~i~cpfcR~~~ 54 (296)
T KOG4185|consen 23 RVLKCGHTI-CQNCASKLLGNSRILCPFCRETT 54 (296)
T ss_pred cccccCcee-hHhHHHHHhcCceeeccCCCCcc
Confidence 345699999 99999998765 35799999984
No 228
>KOG0827 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=65.27 E-value=4.7 Score=39.91 Aligned_cols=37 Identities=27% Similarity=0.660 Sum_probs=26.1
Q ss_pred ccCCceEEe-CCCCchhhHHhHHHHhcc---CCccccccccc
Q 010517 462 EAPVEGACV-PCGHMAGCMSCLSEIKAK---KGDCPVCRTKI 499 (508)
Q Consensus 462 ~~~~~~~~~-pCgH~~~C~~C~~~~~~~---~~~CP~Cr~~i 499 (508)
....+.... -|||.| ...|..+|-.. +..||+||-.+
T Consensus 15 p~~~~l~~i~~cGhif-h~~cl~qwfe~~Ps~R~cpic~ik~ 55 (465)
T KOG0827|consen 15 PNDHELGPIGTCGHIF-HTTCLTQWFEGDPSNRGCPICQIKL 55 (465)
T ss_pred ccccccccccchhhHH-HHHHHHHHHccCCccCCCCceeecc
Confidence 333334434 499999 99999999765 24799998333
No 229
>KOG4218 consensus Nuclear hormone receptor betaFTZ-F1 [Transcription]
Probab=64.47 E-value=4.2 Score=39.44 Aligned_cols=43 Identities=26% Similarity=0.559 Sum_probs=25.8
Q ss_pred CccccccccccCCceEEeCCCCchhhHHhHHHHhc---------------------cCCccccccccc
Q 010517 453 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKA---------------------KKGDCPVCRTKI 499 (508)
Q Consensus 453 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~---------------------~~~~CP~Cr~~i 499 (508)
.+..|+||-|+..-.-. |-. .|++|---.++ .+++||.||-.-
T Consensus 14 l~ElCPVCGDkVSGYHY---GLL-TCESCKGFFKRTVQNnK~YtC~e~qnC~iDkTqRKRCP~CRFQK 77 (475)
T KOG4218|consen 14 LGELCPVCGDKVSGYHY---GLL-TCESCKGFFKRTVQNNKQYTCSEEQNCHIDKTQRKRCPSCRFQK 77 (475)
T ss_pred cccccccccCcccccee---eee-ehhhhhhHHHHHhhcCcceecccccccccchHhhccCCchhHHH
Confidence 34689999998764432 222 26776433322 245799998643
No 230
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=63.46 E-value=2.1 Score=46.58 Aligned_cols=45 Identities=27% Similarity=0.537 Sum_probs=32.6
Q ss_pred CccccccccccCC-ceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010517 453 SSSSCVICWEAPV-EGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 501 (508)
Q Consensus 453 ~~~~C~iC~~~~~-~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~ 501 (508)
+...|..|--... -.|...|||.| ...|.. .....||.|+.....
T Consensus 839 q~skCs~C~~~LdlP~VhF~CgHsy-HqhC~e---~~~~~CP~C~~e~~~ 884 (933)
T KOG2114|consen 839 QVSKCSACEGTLDLPFVHFLCGHSY-HQHCLE---DKEDKCPKCLPELRG 884 (933)
T ss_pred eeeeecccCCccccceeeeecccHH-HHHhhc---cCcccCCccchhhhh
Confidence 3468999976643 34556899999 999988 333479999885443
No 231
>TIGR01562 FdhE formate dehydrogenase accessory protein FdhE. The only sequence scoring between trusted and noise is that from Aquifex aeolicus, which shows certain structural differences from the proteobacterial forms in the alignment. However it is notable that A. aeolicus also has a sequence scoring above trusted to the alpha subunit of formate dehydrogenase (TIGR01553).
Probab=63.32 E-value=2.4 Score=41.45 Aligned_cols=45 Identities=22% Similarity=0.449 Sum_probs=33.4
Q ss_pred ccccccccccCCceEEeC----CCCchh-hHHhHHHHhccCCcccccccc
Q 010517 454 SSSCVICWEAPVEGACVP----CGHMAG-CMSCLSEIKAKKGDCPVCRTK 498 (508)
Q Consensus 454 ~~~C~iC~~~~~~~~~~p----CgH~~~-C~~C~~~~~~~~~~CP~Cr~~ 498 (508)
...|+||-..+...++.. =|+++. |..|...|...+..||.|...
T Consensus 184 ~~~CPvCGs~P~~s~~~~~~~~~G~RyL~CslC~teW~~~R~~C~~Cg~~ 233 (305)
T TIGR01562 184 RTLCPACGSPPVASMVRQGGKETGLRYLSCSLCATEWHYVRVKCSHCEES 233 (305)
T ss_pred CCcCCCCCChhhhhhhcccCCCCCceEEEcCCCCCcccccCccCCCCCCC
Confidence 369999999886544332 343332 999999998888889999764
No 232
>KOG0298 consensus DEAD box-containing helicase-like transcription factor/DNA repair protein [Replication, recombination and repair]
Probab=62.99 E-value=2.2 Score=48.57 Aligned_cols=44 Identities=27% Similarity=0.678 Sum_probs=36.8
Q ss_pred cccccccccCC-ceEEeCCCCchhhHHhHHHHhccCCccccccccc
Q 010517 455 SSCVICWEAPV-EGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKI 499 (508)
Q Consensus 455 ~~C~iC~~~~~-~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i 499 (508)
..|.||.|..+ ......|||.+ |..|...|...+..||+|...+
T Consensus 1154 ~~c~ic~dil~~~~~I~~cgh~~-c~~c~~~~l~~~s~~~~~ksi~ 1198 (1394)
T KOG0298|consen 1154 FVCEICLDILRNQGGIAGCGHEP-CCRCDELWLYASSRCPICKSIK 1198 (1394)
T ss_pred cchHHHHHHHHhcCCeeeechhH-hhhHHHHHHHHhccCcchhhhh
Confidence 48999999876 44455899999 9999999999888999996433
No 233
>PF12906 RINGv: RING-variant domain; PDB: 2D8S_A 1VYX_A.
Probab=59.18 E-value=5.3 Score=27.11 Aligned_cols=39 Identities=31% Similarity=0.620 Sum_probs=24.2
Q ss_pred cccccccCC--ceEEeCCCCc----hhhHHhHHHHhcc--CCccccc
Q 010517 457 CVICWEAPV--EGACVPCGHM----AGCMSCLSEIKAK--KGDCPVC 495 (508)
Q Consensus 457 C~iC~~~~~--~~~~~pCgH~----~~C~~C~~~~~~~--~~~CP~C 495 (508)
|-||++... ...+.||+-. ++...|+.+|... +..|++|
T Consensus 1 CrIC~~~~~~~~~li~pC~C~Gs~~~vH~~CL~~W~~~~~~~~C~~C 47 (47)
T PF12906_consen 1 CRICLEGEEEDEPLISPCRCKGSMKYVHRSCLERWIRESGNRKCEIC 47 (47)
T ss_dssp ETTTTEE-SSSS-EE-SSS-SSCCGSEECCHHHHHHHHHT-SB-TTT
T ss_pred CeEeCCcCCCCCceecccccCCCcchhHHHHHHHHHHhcCCCcCCCC
Confidence 678887743 2466799832 4588899998774 3579887
No 234
>KOG3799 consensus Rab3 effector RIM1 and related proteins, contain Rab3a binding domain [Intracellular trafficking, secretion, and vesicular transport]
Probab=57.49 E-value=5 Score=33.32 Aligned_cols=28 Identities=32% Similarity=0.895 Sum_probs=18.6
Q ss_pred CCcccccccccc-CCceEEeCCCCchhhHHhHHHH
Q 010517 452 GSSSSCVICWEA-PVEGACVPCGHMAGCMSCLSEI 485 (508)
Q Consensus 452 ~~~~~C~iC~~~-~~~~~~~pCgH~~~C~~C~~~~ 485 (508)
+++..|.||+.. +.+ -|||. |.+|-.+.
T Consensus 63 ~ddatC~IC~KTKFAD----G~GH~--C~YCq~r~ 91 (169)
T KOG3799|consen 63 GDDATCGICHKTKFAD----GCGHN--CSYCQTRF 91 (169)
T ss_pred CcCcchhhhhhccccc----ccCcc--cchhhhhH
Confidence 345799999875 343 58998 56664443
No 235
>KOG1952 consensus Transcription factor NF-X1, contains NFX-type Zn2+-binding and R3H domains [Transcription]
Probab=54.49 E-value=6.4 Score=43.02 Aligned_cols=45 Identities=27% Similarity=0.672 Sum_probs=33.6
Q ss_pred CCccccccccccCCceE----EeCCCCchhhHHhHHHHhcc-------CCccccccc
Q 010517 452 GSSSSCVICWEAPVEGA----CVPCGHMAGCMSCLSEIKAK-------KGDCPVCRT 497 (508)
Q Consensus 452 ~~~~~C~iC~~~~~~~~----~~pCgH~~~C~~C~~~~~~~-------~~~CP~Cr~ 497 (508)
....+|.||+|+..... ...|-|+| -..|+..|-+. .++||.|+.
T Consensus 189 ~~~yeCmIC~e~I~~t~~~WSC~sCYhVF-Hl~CI~~WArs~ek~~~~~WrCP~Cqs 244 (950)
T KOG1952|consen 189 NRKYECMICTERIKRTAPVWSCKSCYHVF-HLNCIKKWARSSEKTGQDGWRCPACQS 244 (950)
T ss_pred cCceEEEEeeeeccccCCceecchhhhhh-hHHHHHHHHHHhhhccCccccCCcccc
Confidence 45579999999853222 33677999 99999999653 358999974
No 236
>KOG3053 consensus Uncharacterized conserved protein [Function unknown]
Probab=54.45 E-value=8.1 Score=36.09 Aligned_cols=53 Identities=28% Similarity=0.521 Sum_probs=35.6
Q ss_pred CCCCccccccccccCCceE----EeCCCCc----hhhHHhHHHHhccC--------Cccccccccccce
Q 010517 450 DDGSSSSCVICWEAPVEGA----CVPCGHM----AGCMSCLSEIKAKK--------GDCPVCRTKINQV 502 (508)
Q Consensus 450 ~~~~~~~C~iC~~~~~~~~----~~pCgH~----~~C~~C~~~~~~~~--------~~CP~Cr~~i~~~ 502 (508)
+.+.+..|=||+....+-. +.||..+ .+...|..+|-..+ ..||.|++....+
T Consensus 16 ~~e~eR~CWiCF~TdeDn~~a~WV~PCrCRGt~KWVHqsCL~rWiDEK~~~n~~q~V~C~QCqTEYiiv 84 (293)
T KOG3053|consen 16 NQELERCCWICFATDEDNRLAAWVHPCRCRGTTKWVHQSCLSRWIDEKQRGNPLQTVSCPQCQTEYIIV 84 (293)
T ss_pred ccccceeEEEEeccCcccchhhhcccccccCccHHHHHHHHHHHHhHHhcCCCCceeechhhcchheee
Confidence 3445579999998755433 3488733 23899999986532 2599998866543
No 237
>PF04423 Rad50_zn_hook: Rad50 zinc hook motif; InterPro: IPR007517 The Mre11 complex (Mre11 Rad50 Nbs1) is central to chromosomal maintenance and functions in homologous recombination, telomere maintenance and sister chromatid association. The Rad50 coiled-coil region contains a dimer interface at the apex of the coiled coils in which pairs of conserved Cys-X-X-Cys motifs form interlocking hooks that bind one Zn ion. This alignment includes the zinc hook motif and a short stretch of coiled-coil on either side.; GO: 0004518 nuclease activity, 0005524 ATP binding, 0008270 zinc ion binding, 0006281 DNA repair; PDB: 1L8D_B.
Probab=50.48 E-value=6.6 Score=27.45 Aligned_cols=12 Identities=42% Similarity=1.171 Sum_probs=6.3
Q ss_pred CCcccccccccc
Q 010517 489 KGDCPVCRTKIN 500 (508)
Q Consensus 489 ~~~CP~Cr~~i~ 500 (508)
...||+|..++.
T Consensus 20 ~~~CPlC~r~l~ 31 (54)
T PF04423_consen 20 KGCCPLCGRPLD 31 (54)
T ss_dssp SEE-TTT--EE-
T ss_pred CCcCCCCCCCCC
Confidence 347999999886
No 238
>PF08746 zf-RING-like: RING-like domain; InterPro: IPR014857 This is a zinc finger domain that is related to the C3HC4 RING finger domain (IPR001841 from INTERPRO). ; PDB: 3NW0_A 2CT0_A.
Probab=49.92 E-value=17 Score=24.14 Aligned_cols=38 Identities=24% Similarity=0.615 Sum_probs=18.8
Q ss_pred cccccccCCceEEeC---CCCchhhHHhHHHHhccCC--ccccc
Q 010517 457 CVICWEAPVEGACVP---CGHMAGCMSCLSEIKAKKG--DCPVC 495 (508)
Q Consensus 457 C~iC~~~~~~~~~~p---CgH~~~C~~C~~~~~~~~~--~CP~C 495 (508)
|.+|.+.....+.=+ |+=.+ ...|+....+... .||.|
T Consensus 1 C~~C~~iv~~G~~C~~~~C~~r~-H~~C~~~y~r~~~~~~CP~C 43 (43)
T PF08746_consen 1 CEACKEIVTQGQRCSNRDCNVRL-HDDCFKKYFRHRSNPKCPNC 43 (43)
T ss_dssp -TTT-SB-SSSEE-SS--S--EE--HHHHHHHTTT-SS-B-TTT
T ss_pred CcccchhHeeeccCCCCccCchH-HHHHHHHHHhcCCCCCCcCC
Confidence 556666544333322 66556 8889988877643 69987
No 239
>KOG1812 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=48.29 E-value=6.1 Score=40.23 Aligned_cols=31 Identities=29% Similarity=0.765 Sum_probs=21.6
Q ss_pred cccccccccCCce----EEeCCCCchhhHHhHHHHh
Q 010517 455 SSCVICWEAPVEG----ACVPCGHMAGCMSCLSEIK 486 (508)
Q Consensus 455 ~~C~iC~~~~~~~----~~~pCgH~~~C~~C~~~~~ 486 (508)
..|.||+...... ....|+|.| |..|.++--
T Consensus 147 ~~C~iC~~e~~~~~~~f~~~~C~H~f-C~~C~k~~i 181 (384)
T KOG1812|consen 147 EECGICFVEDPEAEDMFSVLKCGHRF-CKDCVKQHI 181 (384)
T ss_pred ccCccCccccccHhhhHHHhcccchh-hhHHhHHHh
Confidence 5899999332211 134799999 999988643
No 240
>KOG1815 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=47.30 E-value=11 Score=39.22 Aligned_cols=31 Identities=29% Similarity=0.524 Sum_probs=26.9
Q ss_pred cccccccccCCc-eEEeCCCCchhhHHhHHHHh
Q 010517 455 SSCVICWEAPVE-GACVPCGHMAGCMSCLSEIK 486 (508)
Q Consensus 455 ~~C~iC~~~~~~-~~~~pCgH~~~C~~C~~~~~ 486 (508)
..|-||++.... .+.+.|||.| |..|.....
T Consensus 71 ~~c~ic~~~~~~~~~~~~c~H~~-c~~cw~~yl 102 (444)
T KOG1815|consen 71 VQCGICVESYDGEIIGLGCGHPF-CPPCWTGYL 102 (444)
T ss_pred ccCCcccCCCcchhhhcCCCcHH-HHHHHHHHh
Confidence 689999999874 7788999999 999988843
No 241
>KOG3039 consensus Uncharacterized conserved protein [Function unknown]
Probab=46.12 E-value=14 Score=34.38 Aligned_cols=33 Identities=12% Similarity=0.121 Sum_probs=29.0
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHH
Q 010517 451 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSE 484 (508)
Q Consensus 451 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~ 484 (508)
...-..|+.|+....++|+.|=||.| |.+|+..
T Consensus 40 iK~FdcCsLtLqPc~dPvit~~Gylf-drEaILe 72 (303)
T KOG3039|consen 40 IKPFDCCSLTLQPCRDPVITPDGYLF-DREAILE 72 (303)
T ss_pred cCCcceeeeecccccCCccCCCCeee-eHHHHHH
Confidence 33447999999999999999999999 9999765
No 242
>PF13240 zinc_ribbon_2: zinc-ribbon domain
Probab=45.89 E-value=3.3 Score=23.38 Aligned_cols=22 Identities=36% Similarity=0.807 Sum_probs=13.6
Q ss_pred hHHhHHHHhccCCccccccccc
Q 010517 478 CMSCLSEIKAKKGDCPVCRTKI 499 (508)
Q Consensus 478 C~~C~~~~~~~~~~CP~Cr~~i 499 (508)
|..|...+......||.|..+|
T Consensus 2 Cp~CG~~~~~~~~fC~~CG~~l 23 (23)
T PF13240_consen 2 CPNCGAEIEDDAKFCPNCGTPL 23 (23)
T ss_pred CcccCCCCCCcCcchhhhCCcC
Confidence 5566666555555677776653
No 243
>KOG3842 consensus Adaptor protein Pellino [Signal transduction mechanisms]
Probab=45.27 E-value=11 Score=36.18 Aligned_cols=44 Identities=20% Similarity=0.600 Sum_probs=24.5
Q ss_pred ccCCceEEeCCCCchhhHH--hHHHHhccCCccccccccccceeEee
Q 010517 462 EAPVEGACVPCGHMAGCMS--CLSEIKAKKGDCPVCRTKINQVIRLY 506 (508)
Q Consensus 462 ~~~~~~~~~pCgH~~~C~~--C~~~~~~~~~~CP~Cr~~i~~~i~i~ 506 (508)
++..-.|++.|||+-.-.. |-+.--....+||+||. +...++||
T Consensus 312 ~~~QP~vYl~CGHV~G~H~WG~~e~~g~~~r~CPmC~~-~gp~V~L~ 357 (429)
T KOG3842|consen 312 DEKQPWVYLNCGHVHGYHNWGVRENTGQRERECPMCRV-VGPYVPLW 357 (429)
T ss_pred cccCCeEEEeccccccccccccccccCcccCcCCeeee-ecceeeee
Confidence 3445577889998763211 11111112357999986 44466663
No 244
>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center. The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.
Probab=45.18 E-value=7.4 Score=24.12 Aligned_cols=15 Identities=27% Similarity=0.618 Sum_probs=11.3
Q ss_pred CccccccccccceeE
Q 010517 490 GDCPVCRTKINQVIR 504 (508)
Q Consensus 490 ~~CP~Cr~~i~~~i~ 504 (508)
..||+|..+-..|++
T Consensus 18 ~~CP~Cg~~~~~F~~ 32 (33)
T cd00350 18 WVCPVCGAPKDKFEK 32 (33)
T ss_pred CcCcCCCCcHHHcEE
Confidence 469999887766654
No 245
>COG5183 SSM4 Protein involved in mRNA turnover and stability [RNA processing and modification]
Probab=44.55 E-value=21 Score=38.91 Aligned_cols=53 Identities=23% Similarity=0.441 Sum_probs=39.1
Q ss_pred Ccccccccccc--CCceEEeCCCCc----hhhHHhHHHHhcc--CCccccccccccceeEee
Q 010517 453 SSSSCVICWEA--PVEGACVPCGHM----AGCMSCLSEIKAK--KGDCPVCRTKINQVIRLY 506 (508)
Q Consensus 453 ~~~~C~iC~~~--~~~~~~~pCgH~----~~C~~C~~~~~~~--~~~CP~Cr~~i~~~i~i~ 506 (508)
+...|-||... +-++.|.||.+. +...+|...|-.. +.+|-+|+.++. +-.||
T Consensus 11 d~~~CRICr~e~~~d~pLfhPCKC~GSIkYiH~eCL~eW~~~s~~~kCdiChy~~~-Fk~IY 71 (1175)
T COG5183 11 DKRSCRICRTEDIRDDPLFHPCKCSGSIKYIHRECLMEWMECSGTKKCDICHYEYK-FKDIY 71 (1175)
T ss_pred cchhceeecCCCCCCCcCcccccccchhHHHHHHHHHHHHhcCCCcceeeecceee-eeeec
Confidence 34689998865 568889999853 4589999998764 357999988764 33343
No 246
>PF10217 DUF2039: Uncharacterized conserved protein (DUF2039); InterPro: IPR019351 This entry is a region of approximately 100 residues containing three pairs of cysteine residues. The region is conserved from plants to humans but its function is unknown.
Probab=44.55 E-value=6 Score=30.99 Aligned_cols=35 Identities=31% Similarity=0.715 Sum_probs=24.8
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccc
Q 010517 455 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTK 498 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~ 498 (508)
..|..|.++-..-+ =|.+ |..|+..+.. |+.|..+
T Consensus 56 ~kC~~C~qktVk~A----Yh~i-C~~Ca~~~~v----CaKC~k~ 90 (92)
T PF10217_consen 56 KKCNKCQQKTVKHA----YHVI-CDPCAKELKV----CAKCGKP 90 (92)
T ss_pred ccccccccchHHHH----HHHH-HHHHHHhhcc----CcccCCC
Confidence 46666666544332 2777 9999999986 9999764
No 247
>PLN02436 cellulose synthase A
Probab=44.07 E-value=14 Score=42.13 Aligned_cols=45 Identities=27% Similarity=0.678 Sum_probs=32.2
Q ss_pred cccccccccC-------CceEEeCCCCchhhHHhHHHHhcc-CCcccccccccc
Q 010517 455 SSCVICWEAP-------VEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~~-------~~~~~~pCgH~~~C~~C~~~~~~~-~~~CP~Cr~~i~ 500 (508)
..|.||-|.. .-+++--|+--+ |..|.+--.+. +..||.|++...
T Consensus 37 ~iCqICGD~Vg~t~dGe~FVACn~C~fpv-Cr~Cyeyer~eg~~~Cpqckt~Y~ 89 (1094)
T PLN02436 37 QTCQICGDEIELTVDGEPFVACNECAFPV-CRPCYEYERREGNQACPQCKTRYK 89 (1094)
T ss_pred ccccccccccCcCCCCCEEEeeccCCCcc-ccchhhhhhhcCCccCcccCCchh
Confidence 5999999973 223344566666 99998765443 568999998876
No 248
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=44.02 E-value=1.6 Score=45.72 Aligned_cols=139 Identities=17% Similarity=-0.036 Sum_probs=81.8
Q ss_pred cccccCCchHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhC----------CCHHH-HHHHH-------
Q 010517 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS----------GLINV-AKTLI------- 71 (508)
Q Consensus 10 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~----------g~~~~-v~~Ll------- 71 (508)
.+.....+.++.+++...|+...++.....+.. +....++.++++... +..++ +.+.+
T Consensus 48 i~~~~s~~~~~~~l~~~~g~~~~~~~a~~fDv~----~~g~~~~gl~~aml~a~~~~~~P~~~a~~~~~~~~~~~~~~ll 123 (503)
T KOG0513|consen 48 INQGVSLAYLELRLQNIDGDPSAARLADYFDVS----IAGTNTGGLITAMLFAPNDCGRPRFGATDILWKFNLEKAPKLL 123 (503)
T ss_pred hhhhhhhcccHHHHHhccCChHhhHhhhccCce----eeccCCchhhhhhhhccccccCccccccchhhhhhhcCCCccc
Confidence 445667788999999999999877766544321 222333333333210 11222 33333
Q ss_pred HcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccc
Q 010517 72 ELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLRE 151 (508)
Q Consensus 72 ~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 151 (508)
....+++.. .....++++........+++..++..+..-...+..|.|+||.+...++. +.. +. ..+
T Consensus 124 ~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~--~~~-------i~--~ld 190 (503)
T KOG0513|consen 124 EKFDDPNFI--KGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENL--LVV-------IP--CLD 190 (503)
T ss_pred ccccccccc--ccccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCc--ceE-------EE--eec
Confidence 333333321 23456788888888888888777776666666677889999999888776 111 11 445
Q ss_pred cCCCCHHHHHHhhcC
Q 010517 152 FYGPSFLEALAPQLM 166 (508)
Q Consensus 152 ~~g~tpL~~~A~~~~ 166 (508)
.++.+|++ +.+...
T Consensus 191 l~~~~P~l-f~~~~~ 204 (503)
T KOG0513|consen 191 LKSLTPNL-FSIYDA 204 (503)
T ss_pred cCcCCcee-eeeecc
Confidence 55566766 444433
No 249
>PF04710 Pellino: Pellino; InterPro: IPR006800 Pellino is involved in Toll-like signalling pathways, and associates with the kinase domain of the Pelle Ser/Thr kinase [, , ].; PDB: 3EGB_B 3EGA_A.
Probab=43.27 E-value=7.9 Score=38.66 Aligned_cols=40 Identities=23% Similarity=0.575 Sum_probs=0.0
Q ss_pred CCceEEeCCCCchhhHHhHHHHhc---cCCccccccccccceeEe
Q 010517 464 PVEGACVPCGHMAGCMSCLSEIKA---KKGDCPVCRTKINQVIRL 505 (508)
Q Consensus 464 ~~~~~~~pCgH~~~C~~C~~~~~~---~~~~CP~Cr~~i~~~i~i 505 (508)
..-.|++.|||+..-.. ...-.. ....||+||. +..+++|
T Consensus 301 ~qP~VYl~CGHVhG~h~-Wg~~~~~~~~~r~CPlCr~-~g~~V~L 343 (416)
T PF04710_consen 301 RQPWVYLNCGHVHGYHN-WGQDSDRDPRSRTCPLCRQ-VGPYVPL 343 (416)
T ss_dssp ---------------------------------------------
T ss_pred cCceeeccccceeeecc-cccccccccccccCCCccc-cCCceeE
Confidence 34467889999873221 111111 1347999987 4444554
No 250
>PLN02189 cellulose synthase
Probab=41.38 E-value=16 Score=41.47 Aligned_cols=45 Identities=27% Similarity=0.685 Sum_probs=31.6
Q ss_pred cccccccccC----CceEEeC---CCCchhhHHhHHHHhcc-CCcccccccccc
Q 010517 455 SSCVICWEAP----VEGACVP---CGHMAGCMSCLSEIKAK-KGDCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~~----~~~~~~p---CgH~~~C~~C~~~~~~~-~~~CP~Cr~~i~ 500 (508)
..|.||-|.. ..-.|+. |+--+ |..|.+--.+. +..||.|++...
T Consensus 35 ~~C~iCgd~vg~~~~g~~fvaC~~C~fpv-Cr~Cyeyer~eg~q~CpqCkt~Y~ 87 (1040)
T PLN02189 35 QVCEICGDEIGLTVDGDLFVACNECGFPV-CRPCYEYERREGTQNCPQCKTRYK 87 (1040)
T ss_pred ccccccccccCcCCCCCEEEeeccCCCcc-ccchhhhhhhcCCccCcccCCchh
Confidence 5899999973 2223444 55555 99998765443 568999998876
No 251
>PF07191 zinc-ribbons_6: zinc-ribbons; InterPro: IPR010807 This family consists of several short, hypothetical bacterial proteins of around 70 residues in length. Members of this family 8 highly conserved cysteine residues. The function of the family is unknown.; PDB: 2JRP_A 2JNE_A.
Probab=34.90 E-value=2.7 Score=31.02 Aligned_cols=40 Identities=25% Similarity=0.630 Sum_probs=16.2
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010517 455 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~ 500 (508)
..|+.|.......- +|.. |..|...... ...||-|.+++.
T Consensus 2 ~~CP~C~~~L~~~~----~~~~-C~~C~~~~~~-~a~CPdC~~~Le 41 (70)
T PF07191_consen 2 NTCPKCQQELEWQG----GHYH-CEACQKDYKK-EAFCPDCGQPLE 41 (70)
T ss_dssp -B-SSS-SBEEEET----TEEE-ETTT--EEEE-EEE-TTT-SB-E
T ss_pred CcCCCCCCccEEeC----CEEE-Ccccccccee-cccCCCcccHHH
Confidence 46777776633221 4444 6666554322 234666666554
No 252
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=33.89 E-value=39 Score=38.67 Aligned_cols=46 Identities=28% Similarity=0.631 Sum_probs=32.4
Q ss_pred ccccccccccC-------CceEEeCCCCchhhHHhHHHHhc-cCCcccccccccc
Q 010517 454 SSSCVICWEAP-------VEGACVPCGHMAGCMSCLSEIKA-KKGDCPVCRTKIN 500 (508)
Q Consensus 454 ~~~C~iC~~~~-------~~~~~~pCgH~~~C~~C~~~~~~-~~~~CP~Cr~~i~ 500 (508)
...|.||-|.. .-+++--|+--+ |..|.+-=.+ .+..||.|++...
T Consensus 17 ~qiCqICGD~vg~~~~Ge~FVAC~eC~FPV-CrpCYEYEr~eG~q~CPqCktrYk 70 (1079)
T PLN02638 17 GQVCQICGDNVGKTVDGEPFVACDVCAFPV-CRPCYEYERKDGNQSCPQCKTKYK 70 (1079)
T ss_pred CceeeecccccCcCCCCCEEEEeccCCCcc-ccchhhhhhhcCCccCCccCCchh
Confidence 35999999872 224455676667 9999865333 3568999998765
No 253
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=33.49 E-value=27 Score=35.05 Aligned_cols=33 Identities=30% Similarity=0.695 Sum_probs=25.5
Q ss_pred eEEeCCCCchhhHHhHHHHhcc--CCcccccccccc
Q 010517 467 GACVPCGHMAGCMSCLSEIKAK--KGDCPVCRTKIN 500 (508)
Q Consensus 467 ~~~~pCgH~~~C~~C~~~~~~~--~~~CP~Cr~~i~ 500 (508)
.+.+-|||.| =..|+++|..+ ...||.|...-.
T Consensus 22 ~vsl~cghlF-gs~cie~wl~k~~~~~cp~c~~kat 56 (463)
T KOG1645|consen 22 IVSLQCGHLF-GSQCIEKWLGKKTKMQCPLCSGKAT 56 (463)
T ss_pred Eeeecccccc-cHHHHHHHHhhhhhhhCcccCChhH
Confidence 4556899999 99999998753 246999976543
No 254
>PF07975 C1_4: TFIIH C1-like domain; InterPro: IPR004595 All proteins in this domain for which functions are known are components of the TFIIH complex which is involved in the initiation of transcription and nucleotide excision repair. It includes the yeast transcription factor Ssl1 (Suppressor of stem-loop protein 1) that is essential for translation initiation and affects UV resistance. The C-terminal region is essential for transcription activity. This regions binds three zinc atoms through two independent domain. The first contains a C4 zinc finger motif, whereas the second is characterised by a CX(2)CX(2-4)FCADCD motif. The solution structure of the second C-terminal domain revealed homology with the regulatory domain of protein kinase C [].; GO: 0006281 DNA repair, 0005634 nucleus; PDB: 1Z60_A.
Probab=33.15 E-value=25 Score=24.35 Aligned_cols=25 Identities=28% Similarity=0.741 Sum_probs=15.6
Q ss_pred CCCCchhhHHhHHHHhccCCcccccc
Q 010517 471 PCGHMAGCMSCLSEIKAKKGDCPVCR 496 (508)
Q Consensus 471 pCgH~~~C~~C~~~~~~~~~~CP~Cr 496 (508)
.|++.| |.+|-.-+-..-..||-|-
T Consensus 26 ~C~~~F-C~dCD~fiHE~LH~CPGC~ 50 (51)
T PF07975_consen 26 KCKNHF-CIDCDVFIHETLHNCPGCE 50 (51)
T ss_dssp TTT--B--HHHHHTTTTTS-SSSTT-
T ss_pred CCCCcc-ccCcChhhhccccCCcCCC
Confidence 788888 9999766655555799883
No 255
>COG5109 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=32.90 E-value=25 Score=33.90 Aligned_cols=40 Identities=23% Similarity=0.505 Sum_probs=27.5
Q ss_pred eEEeCCCCchhhHHhHHHHhccC---Cccccccccc--cceeEeee
Q 010517 467 GACVPCGHMAGCMSCLSEIKAKK---GDCPVCRTKI--NQVIRLYT 507 (508)
Q Consensus 467 ~~~~pCgH~~~C~~C~~~~~~~~---~~CP~Cr~~i--~~~i~i~~ 507 (508)
++.+.|||.. =.+-+.++++.. -+||+|-.-- ...+|+|+
T Consensus 352 P~ml~CgHVI-skeal~~LS~nG~~~FKCPYCP~~~~~~~~~rvrf 396 (396)
T COG5109 352 PVMLECGHVI-SKEALSVLSQNGVLSFKCPYCPEMSKYENILRVRF 396 (396)
T ss_pred Ceeeecccee-eHHHHHHHhhcCcEEeeCCCCCcchhhhhhhcccC
Confidence 5667899999 788788777642 2699995432 35666653
No 256
>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines. Several members are annotated as putative helicases.
Probab=32.28 E-value=9 Score=22.38 Aligned_cols=19 Identities=32% Similarity=0.794 Sum_probs=8.1
Q ss_pred hHHhHHHHhccCCcccccc
Q 010517 478 CMSCLSEIKAKKGDCPVCR 496 (508)
Q Consensus 478 C~~C~~~~~~~~~~CP~Cr 496 (508)
|.+|...+...-..||.|.
T Consensus 3 CP~C~~~V~~~~~~Cp~CG 21 (26)
T PF10571_consen 3 CPECGAEVPESAKFCPHCG 21 (26)
T ss_pred CCCCcCCchhhcCcCCCCC
Confidence 3344333333333455553
No 257
>KOG3970 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=31.88 E-value=47 Score=30.45 Aligned_cols=45 Identities=27% Similarity=0.588 Sum_probs=32.3
Q ss_pred ccccccccc--CCceEEeCCCCchhhHHhHHHHhcc--------CCcccccccccc
Q 010517 455 SSCVICWEA--PVEGACVPCGHMAGCMSCLSEIKAK--------KGDCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~--~~~~~~~pCgH~~~C~~C~~~~~~~--------~~~CP~Cr~~i~ 500 (508)
..|..|--. ..+.+-+-|-|.| .+.|...+... .-.||.|..+|-
T Consensus 51 pNC~LC~t~La~gdt~RLvCyhlf-HW~ClneraA~lPanTAPaGyqCP~Cs~eiF 105 (299)
T KOG3970|consen 51 PNCRLCNTPLASGDTTRLVCYHLF-HWKCLNERAANLPANTAPAGYQCPCCSQEIF 105 (299)
T ss_pred CCCceeCCccccCcceeehhhhhH-HHHHhhHHHhhCCCcCCCCcccCCCCCCccC
Confidence 456666554 3456667899999 99998887643 125999988874
No 258
>PF02318 FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 This entry represents the zinc-binding domain found in rabphilin Rab3A. The small G protein Rab3A plays an important role in the regulation of neurotransmitter release. The crystal structure of the small G protein Rab3A complexed with the effector domain of rabphilin-3A shows that the effector domain of rabphilin-3A contacts Rab3A in two distinct areas. The first interface involves the Rab3A switch I and switch II regions, which are sensitive to the nucleotide-binding state of Rab3A. The second interface consists of a deep pocket in Rab3A that interacts with a SGAWFF structural element of rabphilin-3A. Sequence and structure analysis, and biochemical data suggest that this pocket, or Rab complementarity-determining region (RabCDR), establishes a specific interaction between each Rab protein and its effectors. It has been suggested that RabCDRs could be major determinants of effector specificity during vesicle trafficking and fusion [].; GO: 0008270 zinc ion binding, 0017137 Rab GTPase binding, 0006886 intracellular protein transport; PDB: 2CSZ_A 2ZET_C 1ZBD_B 3BC1_B 2CJS_C 2A20_A.
Probab=31.32 E-value=5.9 Score=32.90 Aligned_cols=45 Identities=27% Similarity=0.539 Sum_probs=30.1
Q ss_pred CccccccccccC-----CceEEeCCCCchhhHHhHHHHhc-cCCcccccccc
Q 010517 453 SSSSCVICWEAP-----VEGACVPCGHMAGCMSCLSEIKA-KKGDCPVCRTK 498 (508)
Q Consensus 453 ~~~~C~iC~~~~-----~~~~~~pCgH~~~C~~C~~~~~~-~~~~CP~Cr~~ 498 (508)
++..|.+|...+ ...+..-|+|.+ |..|...... ..+.|-+|++.
T Consensus 53 ~~~~C~~C~~~fg~l~~~~~~C~~C~~~V-C~~C~~~~~~~~~WlC~vC~k~ 103 (118)
T PF02318_consen 53 GERHCARCGKPFGFLFNRGRVCVDCKHRV-CKKCGVYSKKEPIWLCKVCQKQ 103 (118)
T ss_dssp CCSB-TTTS-BCSCTSTTCEEETTTTEEE-ETTSEEETSSSCCEEEHHHHHH
T ss_pred CCcchhhhCCcccccCCCCCcCCcCCccc-cCccCCcCCCCCCEEChhhHHH
Confidence 346899998753 456778999999 9999665322 23469999763
No 259
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=31.22 E-value=26 Score=30.30 Aligned_cols=26 Identities=27% Similarity=0.567 Sum_probs=20.6
Q ss_pred CCchhhHHhHHHHhccCCccccccccccce
Q 010517 473 GHMAGCMSCLSEIKAKKGDCPVCRTKINQV 502 (508)
Q Consensus 473 gH~~~C~~C~~~~~~~~~~CP~Cr~~i~~~ 502 (508)
.+.| |..|....-. .||-|..+|...
T Consensus 27 ~~~f-C~kCG~~tI~---~Cp~C~~~IrG~ 52 (158)
T PF10083_consen 27 REKF-CSKCGAKTIT---SCPNCSTPIRGD 52 (158)
T ss_pred HHHH-HHHhhHHHHH---HCcCCCCCCCCc
Confidence 3567 9999888655 499999999753
No 260
>COG4306 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.08 E-value=27 Score=28.74 Aligned_cols=22 Identities=27% Similarity=0.736 Sum_probs=16.5
Q ss_pred hhHHhHHHHhccCCccccccccccc
Q 010517 477 GCMSCLSEIKAKKGDCPVCRTKINQ 501 (508)
Q Consensus 477 ~C~~C~~~~~~~~~~CP~Cr~~i~~ 501 (508)
+|..|...--. .||+|.++|..
T Consensus 30 fcskcgeati~---qcp~csasirg 51 (160)
T COG4306 30 FCSKCGEATIT---QCPICSASIRG 51 (160)
T ss_pred HHhhhchHHHh---cCCccCCcccc
Confidence 38999766433 39999999974
No 261
>KOG4335 consensus FERM domain-containing protein KRIT1 [Signal transduction mechanisms]
Probab=28.34 E-value=52 Score=34.14 Aligned_cols=107 Identities=9% Similarity=-0.145 Sum_probs=64.3
Q ss_pred HHHHHHHHcCC--HHHHHHHHHcCCCC-C--ccCCCCCh--HHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHH
Q 010517 19 ELLYQWVIAGD--VDAIRALRSQGASL-E--WMDKEGKT--PLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLH 91 (508)
Q Consensus 19 t~L~~Aa~~g~--~~~v~~Ll~~g~~~-~--~~d~~G~T--pLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh 91 (508)
-.+|.|++.+. ..+++-....+.|- . ..-..|.. +=-+|+..++-..+...+++....+|.. ...++.+||
T Consensus 105 ~qi~~A~~~~~~~Sa~~edv~~~~~~d~~~~~~a~~~~s~~~s~~a~~lg~vs~l~~v~lk~k~~p~~l--~gq~sp~ll 182 (558)
T KOG4335|consen 105 HQIHKAVREVLSLSAIAEDVFAQWVDDFPLHRSACEGDSELLSRNASCLGLVSPLLEVQLKPKHQPNYL--LGQQSPELL 182 (558)
T ss_pred HHHHHhhhhcccchHHHHHHHHhcccccccccchhccchhhhcccccceeccCHHHHHhhccccCCchh--hccCCchhh
Confidence 45777776653 34555555444331 0 00011111 1114455534445666667777778887 778899999
Q ss_pred HHHHcCCHHHHHHHHHCC-CCccccCCCCCcHHHHHH
Q 010517 92 HAAKRGLEPTVRLLLSCG-ANALVRNDDCHTALGVAR 127 (508)
Q Consensus 92 ~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~TpLh~A~ 127 (508)
++...+|.+.+.....+. .+-+..+..|+++..+..
T Consensus 183 l~~~s~h~~~v~~d~~~~~~~rn~~~~~~re~~~~~e 219 (558)
T KOG4335|consen 183 LRFTSAHDDDVAMDEPFLQFRRNVFFPKGRELQIIDE 219 (558)
T ss_pred hhccCCchhhhhccccchHHhhhhhcccCcchhhhHH
Confidence 999999999887766542 445566677888876554
No 262
>KOG3268 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=28.16 E-value=39 Score=29.73 Aligned_cols=47 Identities=26% Similarity=0.699 Sum_probs=32.5
Q ss_pred CccccccccccCC-----ceE--EeCCCCchhhHHhHHHHhcc----C-------Ccccccccccc
Q 010517 453 SSSSCVICWEAPV-----EGA--CVPCGHMAGCMSCLSEIKAK----K-------GDCPVCRTKIN 500 (508)
Q Consensus 453 ~~~~C~iC~~~~~-----~~~--~~pCgH~~~C~~C~~~~~~~----~-------~~CP~Cr~~i~ 500 (508)
+...|.||+.-.- +.+ -..||.-| ..-|...|.+. + +.||+|..||.
T Consensus 164 ~~~~cgicyayqldGTipDqtCdN~qCgkpF-HqiCL~dWLRgilTsRQSFdiiFGeCPYCS~Pia 228 (234)
T KOG3268|consen 164 ELGACGICYAYQLDGTIPDQTCDNIQCGKPF-HQICLTDWLRGILTSRQSFDIIFGECPYCSDPIA 228 (234)
T ss_pred hhhcccceeeeecCCccccccccccccCCcH-HHHHHHHHHHHHhhccceeeeeeccCCCCCCcce
Confidence 3468999986432 222 23799888 88888888652 1 36999999885
No 263
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=28.06 E-value=1.8 Score=45.36 Aligned_cols=99 Identities=10% Similarity=-0.047 Sum_probs=62.5
Q ss_pred HHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcccc
Q 010517 36 LRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVR 115 (508)
Q Consensus 36 Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 115 (508)
|+....+.+.......++++..... ...+++..++.++..-..+ +..|.|+||.+...++. ...++ ..
T Consensus 122 ll~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~l~~~~~~~~~--~~~g~t~L~~tl~~~~~--~~~i~-------~l 189 (503)
T KOG0513|consen 122 LLEKFDDPNFIKGDLNLALRILVSG-DKYSGAEVLLTKYEIADAR--EVLGNTKLHLTLTKENL--LVVIP-------CL 189 (503)
T ss_pred cccccccccccccccccceeeeecC-ccccceeecccccccchhh--hhcCCceeeeeccCCCc--ceEEE-------ee
Confidence 3444444443345677888888875 7778887777766555555 67899999999998877 22222 33
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHcCCccc
Q 010517 116 NDDCHTALGVARIKGHINVVRAIESHICYFC 146 (508)
Q Consensus 116 d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~ 146 (508)
|.++.+|+++.+..+...-+-.++..++..+
T Consensus 190 dl~~~~P~lf~~~~~~~~~~v~~~~~~~~~~ 220 (503)
T KOG0513|consen 190 DLKSLTPNLFSIYDALGTKIVPLLDFKAIDI 220 (503)
T ss_pred ccCcCCceeeeeeccccccchhhhhhhhhhh
Confidence 4455788888776655543333344444443
No 264
>PF13248 zf-ribbon_3: zinc-ribbon domain
Probab=28.04 E-value=11 Score=21.91 Aligned_cols=21 Identities=38% Similarity=0.830 Sum_probs=11.3
Q ss_pred hHHhHHHHhccCCcccccccc
Q 010517 478 CMSCLSEIKAKKGDCPVCRTK 498 (508)
Q Consensus 478 C~~C~~~~~~~~~~CP~Cr~~ 498 (508)
|..|...+......||.|-++
T Consensus 5 Cp~Cg~~~~~~~~fC~~CG~~ 25 (26)
T PF13248_consen 5 CPNCGAEIDPDAKFCPNCGAK 25 (26)
T ss_pred CcccCCcCCcccccChhhCCC
Confidence 555555444434457777554
No 265
>PLN02400 cellulose synthase
Probab=27.41 E-value=32 Score=39.37 Aligned_cols=46 Identities=28% Similarity=0.639 Sum_probs=31.9
Q ss_pred ccccccccccC-------CceEEeCCCCchhhHHhHHHHhc-cCCcccccccccc
Q 010517 454 SSSCVICWEAP-------VEGACVPCGHMAGCMSCLSEIKA-KKGDCPVCRTKIN 500 (508)
Q Consensus 454 ~~~C~iC~~~~-------~~~~~~pCgH~~~C~~C~~~~~~-~~~~CP~Cr~~i~ 500 (508)
...|.||-|.. .-+++.-|+--+ |..|.+-=.+ .+..||.|++...
T Consensus 36 gqiCqICGD~VG~t~dGe~FVAC~eCaFPV-CRpCYEYERkeGnq~CPQCkTrYk 89 (1085)
T PLN02400 36 GQICQICGDDVGVTETGDVFVACNECAFPV-CRPCYEYERKDGTQCCPQCKTRYR 89 (1085)
T ss_pred CceeeecccccCcCCCCCEEEEEccCCCcc-ccchhheecccCCccCcccCCccc
Confidence 36999999872 224455666667 9999854322 3567999998776
No 266
>KOG2807 consensus RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 [Transcription; Replication, recombination and repair]
Probab=27.03 E-value=31 Score=33.59 Aligned_cols=41 Identities=24% Similarity=0.655 Sum_probs=29.8
Q ss_pred cccccccccCC---ceEEeCCCCchhhHHhHHHHhccCCcccccc
Q 010517 455 SSCVICWEAPV---EGACVPCGHMAGCMSCLSEIKAKKGDCPVCR 496 (508)
Q Consensus 455 ~~C~iC~~~~~---~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr 496 (508)
..|-.|.+... ...+-.|.|.| |.+|-.-+-..-..||.|.
T Consensus 331 ~~Cf~C~~~~~~~~~y~C~~Ck~~F-CldCDv~iHesLh~CpgCe 374 (378)
T KOG2807|consen 331 RFCFACQGELLSSGRYRCESCKNVF-CLDCDVFIHESLHNCPGCE 374 (378)
T ss_pred cceeeeccccCCCCcEEchhcccee-eccchHHHHhhhhcCCCcC
Confidence 45999955533 34455899999 9999777666555799995
No 267
>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.
Probab=26.27 E-value=22 Score=22.17 Aligned_cols=14 Identities=21% Similarity=0.745 Sum_probs=10.5
Q ss_pred ccccccccccceeE
Q 010517 491 DCPVCRTKINQVIR 504 (508)
Q Consensus 491 ~CP~Cr~~i~~~i~ 504 (508)
.||+|..+-..+.+
T Consensus 20 ~CP~Cg~~~~~F~~ 33 (34)
T cd00729 20 KCPICGAPKEKFEE 33 (34)
T ss_pred cCcCCCCchHHcEE
Confidence 69999887666554
No 268
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=26.16 E-value=15 Score=38.77 Aligned_cols=55 Identities=31% Similarity=0.376 Sum_probs=38.3
Q ss_pred HHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc
Q 010517 57 ACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALV 114 (508)
Q Consensus 57 Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 114 (508)
|+.. +....+-.|+++++.++.+ |..|.+|+|+++..|..++.+.++....+.+.
T Consensus 403 ~~~~-~~ss~v~~lik~~~~~~~~--d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~ 457 (605)
T KOG3836|consen 403 AALN-NSSSLVFTLIKKGAHPNDD--DKFGFTPLHIPQISGDPRIIQLLLNCKVAISL 457 (605)
T ss_pred hhhc-CCccceeeeecccCccchh--cccccccccccCCCCCHHHhhhhhhhhhhhhc
Confidence 4443 5556666777777777776 77888888888888888888777765544333
No 269
>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins. Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.
Probab=26.02 E-value=22 Score=24.72 Aligned_cols=38 Identities=18% Similarity=0.603 Sum_probs=21.5
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhcc--CCcccccccccc
Q 010517 455 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK--KGDCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~--~~~CP~Cr~~i~ 500 (508)
..|++|.+. -+..-+ +.-|...-... +..||+|...+.
T Consensus 3 f~CP~C~~~-~~~~~L-------~~H~~~~H~~~~~~v~CPiC~~~~~ 42 (54)
T PF05605_consen 3 FTCPYCGKG-FSESSL-------VEHCEDEHRSESKNVVCPICSSRVT 42 (54)
T ss_pred cCCCCCCCc-cCHHHH-------HHHHHhHCcCCCCCccCCCchhhhh
Confidence 578988883 333221 44444443322 246999987654
No 270
>PF10764 Gin: Inhibitor of sigma-G Gin; InterPro: IPR019700 Gin allows sigma-F to delay late forespore transcription by preventing sigma-G to take over before the cell has reached a critical stage of development. Gin is also known as CsfB [].
Probab=25.62 E-value=55 Score=22.09 Aligned_cols=31 Identities=32% Similarity=0.739 Sum_probs=23.7
Q ss_pred ccccccccCCceEEeCCCCchhhHHhHHHHhcc
Q 010517 456 SCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK 488 (508)
Q Consensus 456 ~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~ 488 (508)
.|.||-....+.+.+ .|+.+ |..|-..|...
T Consensus 1 ~CiiC~~~~~~GI~I-~~~fI-C~~CE~~iv~~ 31 (46)
T PF10764_consen 1 KCIICGKEKEEGIHI-YGKFI-CSDCEKEIVNT 31 (46)
T ss_pred CeEeCCCcCCCCEEE-ECeEe-hHHHHHHhccC
Confidence 388998888876554 66666 99999888653
No 271
>COG1379 PHP family phosphoesterase with a Zn ribbon [General function prediction only]
Probab=24.63 E-value=28 Score=33.99 Aligned_cols=46 Identities=24% Similarity=0.480 Sum_probs=27.9
Q ss_pred ccccccccCCceEEeCCCCchhhHHhHHH-----HhccCCccccccccccce
Q 010517 456 SCVICWEAPVEGACVPCGHMAGCMSCLSE-----IKAKKGDCPVCRTKINQV 502 (508)
Q Consensus 456 ~C~iC~~~~~~~~~~pCgH~~~C~~C~~~-----~~~~~~~CP~Cr~~i~~~ 502 (508)
-|-|-...--++.+ -=-|.-+|..|..+ ....++.||.|-..|.+-
T Consensus 228 g~~ivaNyGLdP~L-GKY~~TAC~rC~t~y~le~A~~~~wrCpkCGg~ikKG 278 (403)
T COG1379 228 GCKIVANYGLDPRL-GKYHLTACSRCYTRYSLEEAKSLRWRCPKCGGKIKKG 278 (403)
T ss_pred CceEEEecCcCccc-cchhHHHHHHhhhccCcchhhhhcccCcccccchhhh
Confidence 45554444333433 22377789999844 334457899998877653
No 272
>PLN02195 cellulose synthase A
Probab=24.54 E-value=55 Score=37.16 Aligned_cols=45 Identities=24% Similarity=0.470 Sum_probs=32.0
Q ss_pred cccccccccC-------CceEEeCCCCchhhHHhHHHHhc-cCCcccccccccc
Q 010517 455 SSCVICWEAP-------VEGACVPCGHMAGCMSCLSEIKA-KKGDCPVCRTKIN 500 (508)
Q Consensus 455 ~~C~iC~~~~-------~~~~~~pCgH~~~C~~C~~~~~~-~~~~CP~Cr~~i~ 500 (508)
..|.||-|.. .-+++--|+--+ |..|.+-=.+ .+..||.|.+...
T Consensus 7 ~~c~~cgd~~~~~~~g~~fvaC~eC~~pv-CrpCyeyer~eg~q~CpqCkt~Yk 59 (977)
T PLN02195 7 PICATCGEEVGVDSNGEAFVACHECSYPL-CKACLEYEIKEGRKVCLRCGGPYD 59 (977)
T ss_pred ccceecccccCcCCCCCeEEEeccCCCcc-ccchhhhhhhcCCccCCccCCccc
Confidence 5899999842 224555777777 9999865333 3568999988765
No 273
>KOG2034 consensus Vacuolar sorting protein PEP3/VPS18 [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.30 E-value=38 Score=37.60 Aligned_cols=30 Identities=30% Similarity=0.483 Sum_probs=22.6
Q ss_pred cccccccccC--CceEEeCCCCchhhHHhHHHH
Q 010517 455 SSCVICWEAP--VEGACVPCGHMAGCMSCLSEI 485 (508)
Q Consensus 455 ~~C~iC~~~~--~~~~~~pCgH~~~C~~C~~~~ 485 (508)
..|-+|.-.. +.-++.||||.| .+.|..+.
T Consensus 818 d~C~~C~~~ll~~pF~vf~CgH~F-H~~Cl~~~ 849 (911)
T KOG2034|consen 818 DSCDHCGRPLLIKPFYVFPCGHCF-HRDCLIRH 849 (911)
T ss_pred cchHHhcchhhcCcceeeeccchH-HHHHHHHH
Confidence 5899998764 233344999999 99997664
No 274
>KOG0801 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=24.13 E-value=32 Score=29.77 Aligned_cols=23 Identities=35% Similarity=0.593 Sum_probs=15.5
Q ss_pred CCccccccccccCC---ceEEeCCCC
Q 010517 452 GSSSSCVICWEAPV---EGACVPCGH 474 (508)
Q Consensus 452 ~~~~~C~iC~~~~~---~~~~~pCgH 474 (508)
.+..+|+||+|... ..+-+||-.
T Consensus 175 ddkGECvICLEdL~~GdtIARLPCLC 200 (205)
T KOG0801|consen 175 DDKGECVICLEDLEAGDTIARLPCLC 200 (205)
T ss_pred ccCCcEEEEhhhccCCCceeccceEE
Confidence 34579999999753 344567753
No 275
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=23.99 E-value=65 Score=36.87 Aligned_cols=46 Identities=26% Similarity=0.654 Sum_probs=32.2
Q ss_pred ccccccccccC-------CceEEeCCCCchhhHHhHHHHh-ccCCcccccccccc
Q 010517 454 SSSCVICWEAP-------VEGACVPCGHMAGCMSCLSEIK-AKKGDCPVCRTKIN 500 (508)
Q Consensus 454 ~~~C~iC~~~~-------~~~~~~pCgH~~~C~~C~~~~~-~~~~~CP~Cr~~i~ 500 (508)
...|.||-|.. .-+++--|+--+ |..|.+-=. ..+..||.|.+...
T Consensus 15 ~~~c~iCGd~vg~~~~Ge~FVAC~eC~fpv-Cr~cyeye~~~g~~~cp~c~t~y~ 68 (1044)
T PLN02915 15 AKTCRVCGDEVGVKEDGQPFVACHVCGFPV-CKPCYEYERSEGNQCCPQCNTRYK 68 (1044)
T ss_pred cchhhccccccCcCCCCCEEEEeccCCCcc-ccchhhhhhhcCCccCCccCCchh
Confidence 36899999872 224445666667 999986533 33568999998776
No 276
>PRK01343 zinc-binding protein; Provisional
Probab=23.84 E-value=32 Score=24.41 Aligned_cols=11 Identities=27% Similarity=0.809 Sum_probs=7.3
Q ss_pred ccccccccccc
Q 010517 491 DCPVCRTKINQ 501 (508)
Q Consensus 491 ~CP~Cr~~i~~ 501 (508)
.||+|++++..
T Consensus 11 ~CP~C~k~~~~ 21 (57)
T PRK01343 11 PCPECGKPSTR 21 (57)
T ss_pred cCCCCCCcCcC
Confidence 57777776653
No 277
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=23.74 E-value=65 Score=29.16 Aligned_cols=42 Identities=17% Similarity=-0.013 Sum_probs=19.5
Q ss_pred cHHHHHHHhCCHHHHH-HHHHcCCcccc--cccccCCCCHHHHHHh
Q 010517 121 TALGVARIKGHINVVR-AIESHICYFCG--WLREFYGPSFLEALAP 163 (508)
Q Consensus 121 TpLh~A~~~g~~~~v~-~Ll~~ga~~~~--~~~~~~g~tpL~~~A~ 163 (508)
.|||-|+.-+..+++- ++++..+.+-+ +-.|-+|..+|. +|.
T Consensus 224 ~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALd-iAL 268 (280)
T KOG4591|consen 224 NPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALD-IAL 268 (280)
T ss_pred chhHHhhhccccceeeehhhhccccccccccccCCCchHHHH-HHH
Confidence 4566666555555443 33444333221 133445555555 443
No 278
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=23.53 E-value=65 Score=29.82 Aligned_cols=40 Identities=28% Similarity=0.227 Sum_probs=24.5
Q ss_pred HHHcCCCCcccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q 010517 70 LIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGAN 111 (508)
Q Consensus 70 Ll~~ga~~n~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 111 (508)
|++.|+--|.. |....|+=.+|.++++....+.|++.|+.
T Consensus 1 lle~ga~wn~i--d~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 1 LLEYGAGWNFI--DYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred CcccCCCcccc--ChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 34556666655 45556666666666666666666666643
No 279
>KOG4451 consensus Uncharacterized conserved protein (tumor-associated antigen HCA127 in humans) [Function unknown]
Probab=23.34 E-value=50 Score=30.37 Aligned_cols=23 Identities=35% Similarity=0.933 Sum_probs=19.3
Q ss_pred hHHhHHHHhccCCcccccccccc
Q 010517 478 CMSCLSEIKAKKGDCPVCRTKIN 500 (508)
Q Consensus 478 C~~C~~~~~~~~~~CP~Cr~~i~ 500 (508)
|..|-.++.+.-+.||+|...-.
T Consensus 252 ClsChqqIHRNAPiCPlCKaKsR 274 (286)
T KOG4451|consen 252 CLSCHQQIHRNAPICPLCKAKSR 274 (286)
T ss_pred HHHHHHHHhcCCCCCcchhhccc
Confidence 99999999887788999977543
No 280
>cd00730 rubredoxin Rubredoxin; nonheme iron binding domains containing a [Fe(SCys)4] center. Rubredoxins are small nonheme iron proteins. The iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc. They are believed to be involved in electron transfer.
Probab=22.49 E-value=35 Score=23.49 Aligned_cols=14 Identities=29% Similarity=0.646 Sum_probs=8.2
Q ss_pred ccccccccccceeE
Q 010517 491 DCPVCRTKINQVIR 504 (508)
Q Consensus 491 ~CP~Cr~~i~~~i~ 504 (508)
.||+|..+-.+|..
T Consensus 36 ~CP~C~a~K~~F~~ 49 (50)
T cd00730 36 VCPVCGAGKDDFEP 49 (50)
T ss_pred CCCCCCCcHHHcEe
Confidence 47777666555543
No 281
>KOG0825 consensus PHD Zn-finger protein [General function prediction only]
Probab=21.87 E-value=53 Score=35.95 Aligned_cols=46 Identities=11% Similarity=0.174 Sum_probs=29.1
Q ss_pred ccccccccc----CCceEEeCCCCchhhHHhHHHHhcc------CCccccccccccc
Q 010517 455 SSCVICWEA----PVEGACVPCGHMAGCMSCLSEIKAK------KGDCPVCRTKINQ 501 (508)
Q Consensus 455 ~~C~iC~~~----~~~~~~~pCgH~~~C~~C~~~~~~~------~~~CP~Cr~~i~~ 501 (508)
..|-||+.. +....+-.|+|.+ |..|+..+..+ ...|++|..=|..
T Consensus 100 ~~C~~E~S~~~ds~~i~P~~~~~~~~-CP~Ci~s~~DqL~~~~k~c~H~FC~~Ci~s 155 (1134)
T KOG0825|consen 100 PVCEKEHSPDVDSSNICPVQTHVENQ-CPNCLKSCNDQLEESEKHTAHYFCEECVGS 155 (1134)
T ss_pred chhheecCCcccccCcCchhhhhhhh-hhHHHHHHHHHhhccccccccccHHHHhhh
Confidence 355555555 2222233499999 99999988764 1258888665543
No 282
>COG3058 FdhE Uncharacterized protein involved in formate dehydrogenase formation [Posttranslational modification, protein turnover, chaperones]
Probab=21.85 E-value=64 Score=30.83 Aligned_cols=43 Identities=23% Similarity=0.468 Sum_probs=30.5
Q ss_pred cccccccccCCceEEeCC----CCch-hhHHhHHHHhccCCccccccc
Q 010517 455 SSCVICWEAPVEGACVPC----GHMA-GCMSCLSEIKAKKGDCPVCRT 497 (508)
Q Consensus 455 ~~C~iC~~~~~~~~~~pC----gH~~-~C~~C~~~~~~~~~~CP~Cr~ 497 (508)
..|+||-..+...++.-= |=+| -|.-|...|...+.+|--|..
T Consensus 186 ~~CPvCGS~PvaSmV~~g~~~~GlRYL~CslC~teW~~VR~KC~nC~~ 233 (308)
T COG3058 186 QYCPVCGSMPVASMVQIGETEQGLRYLHCSLCETEWHYVRVKCSNCEQ 233 (308)
T ss_pred ccCCCcCCCCcceeeeecCccccchhhhhhhHHHHHHHHHHHhccccc
Confidence 689999999876665422 2223 299998888776667888854
No 283
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=21.46 E-value=1.7e+02 Score=30.57 Aligned_cols=107 Identities=16% Similarity=0.129 Sum_probs=45.0
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCChHHHHHHHhCCCHHHHHHHHHcCCCCcccCCCCCCCcHHHHHHHcC
Q 010517 18 DELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRG 97 (508)
Q Consensus 18 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~G~TpLh~Aa~~~g~~~~v~~Ll~~ga~~n~~~~d~~g~tpLh~A~~~g 97 (508)
++-+-+|.+.|+++.+..+.+.-- +...+.-|--+|...|+.++++.-+.+..|.+ .-+.+....|
T Consensus 322 ~~rFeLAl~lg~L~~A~~~a~~~~-----~~~~W~~Lg~~AL~~g~~~lAe~c~~k~~d~~---------~L~lLy~~~g 387 (443)
T PF04053_consen 322 DHRFELALQLGNLDIALEIAKELD-----DPEKWKQLGDEALRQGNIELAEECYQKAKDFS---------GLLLLYSSTG 387 (443)
T ss_dssp HHHHHHHHHCT-HHHHHHHCCCCS-----THHHHHHHHHHHHHTTBHHHHHHHHHHCT-HH---------HHHHHHHHCT
T ss_pred HHHhHHHHhcCCHHHHHHHHHhcC-----cHHHHHHHHHHHHHcCCHHHHHHHHHhhcCcc---------ccHHHHHHhC
Confidence 344555555555555554443211 11122333333333366666666555543333 1244555555
Q ss_pred CHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCH-HHHHHHHHcC
Q 010517 98 LEPTVRLLLSCGANALVRNDDCHTALGVARIKGHI-NVVRAIESHI 142 (508)
Q Consensus 98 ~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~-~~v~~Ll~~g 142 (508)
+.+-++.|.+.- ....+-..+++.+...|.. +++++|++.|
T Consensus 388 ~~~~L~kl~~~a----~~~~~~n~af~~~~~lgd~~~cv~lL~~~~ 429 (443)
T PF04053_consen 388 DREKLSKLAKIA----EERGDINIAFQAALLLGDVEECVDLLIETG 429 (443)
T ss_dssp -HHHHHHHHHHH----HHTT-HHHHHHHHHHHT-HHHHHHHHHHTT
T ss_pred CHHHHHHHHHHH----HHccCHHHHHHHHHHcCCHHHHHHHHHHcC
Confidence 555555554321 0001112345555555544 4566665543
No 284
>PF14311 DUF4379: Domain of unknown function (DUF4379)
Probab=20.73 E-value=47 Score=23.16 Aligned_cols=23 Identities=26% Similarity=0.556 Sum_probs=12.8
Q ss_pred CCCCchhhHHhHHHHhccCCccccc
Q 010517 471 PCGHMAGCMSCLSEIKAKKGDCPVC 495 (508)
Q Consensus 471 pCgH~~~C~~C~~~~~~~~~~CP~C 495 (508)
-|||.+-..-.... .....||.|
T Consensus 33 ~Cgh~w~~~v~~R~--~~~~~CP~C 55 (55)
T PF14311_consen 33 KCGHEWKASVNDRT--RRGKGCPYC 55 (55)
T ss_pred CCCCeeEccHhhhc--cCCCCCCCC
Confidence 57787744333222 223469988
No 285
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=20.28 E-value=25 Score=37.23 Aligned_cols=64 Identities=19% Similarity=0.156 Sum_probs=50.4
Q ss_pred HHHcCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCcccccccccCCCCHH
Q 010517 93 AAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFL 158 (508)
Q Consensus 93 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~g~tpL 158 (508)
++..+....+-.|++.++.++..|..|.+|+|+++..|..++++.++....+.+ .+...|.++-
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~--~~~~~~~~~r 466 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAIS--LKSVNGMIAR 466 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhhh--cccccccccc
Confidence 666677777788888999999999999999999999999999999987766555 4444444433
No 286
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=20.15 E-value=15 Score=38.15 Aligned_cols=89 Identities=17% Similarity=0.062 Sum_probs=53.4
Q ss_pred CCChHHHHHHHhCCCHHHHHHHHHcC-CCCcccCCCCCCCcHHHHHHH---cCCHHHHHHHHHCCCCccccCCCCCcH--
Q 010517 49 EGKTPLIVACMDSGLINVAKTLIELG-ANINAYRPGGRGGTPLHHAAK---RGLEPTVRLLLSCGANALVRNDDCHTA-- 122 (508)
Q Consensus 49 ~G~TpLh~Aa~~~g~~~~v~~Ll~~g-a~~n~~~~d~~g~tpLh~A~~---~g~~~~v~~Ll~~ga~~~~~d~~g~Tp-- 122 (508)
+.+|+|++|+.. |.++++.+++..+ .++|-. -.+|.. |.++. .|..+.+..|+..++..+..|..|.-+
T Consensus 57 ~qR~~~~v~~~~-Gs~~~~~~i~~~~~~e~~~~--C~~~~~--~C~~~g~s~~~~e~~~hL~~~k~~~~~tda~g~~~~~ 131 (528)
T KOG1595|consen 57 NQRRRRPVARRD-GSFNYSPDIYCTKYDEVTGI--CPDGDE--HCAVLGRSVGDTERTYHLRYYKTLPCVTDARGNCVKN 131 (528)
T ss_pred ccccccchhhhc-Cccccccceeecchhhcccc--CCCCcc--cchhcccccCCcceeEeccccccccCccccCCCcccC
Confidence 457888888887 8888887777654 333332 233444 44443 355677777777777777777666543
Q ss_pred -HHHHHHhC---CHHHHHHHHHcC
Q 010517 123 -LGVARIKG---HINVVRAIESHI 142 (508)
Q Consensus 123 -Lh~A~~~g---~~~~v~~Ll~~g 142 (508)
||.|...+ -...++.|++.+
T Consensus 132 v~~~~~~~~~~~~r~~~~~l~e~~ 155 (528)
T KOG1595|consen 132 VLHCAFAHGPNDLRPPVEDLLELQ 155 (528)
T ss_pred cccccccCCccccccHHHHHHhcc
Confidence 45444433 234666666665
No 287
>KOG3576 consensus Ovo and related transcription factors [Transcription]
Probab=20.10 E-value=91 Score=28.31 Aligned_cols=52 Identities=19% Similarity=0.406 Sum_probs=28.5
Q ss_pred CCCccccccccccCCceEE----eCCCC---chhhHHhHHHHh------cc-------CC-ccccccccccce
Q 010517 451 DGSSSSCVICWEAPVEGAC----VPCGH---MAGCMSCLSEIK------AK-------KG-DCPVCRTKINQV 502 (508)
Q Consensus 451 ~~~~~~C~iC~~~~~~~~~----~pCgH---~~~C~~C~~~~~------~~-------~~-~CP~Cr~~i~~~ 502 (508)
+.+...|-||+..+.---. +.|-- +..|..|.+-.. +. ++ +|-+|.+.+.++
T Consensus 114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqr 186 (267)
T KOG3576|consen 114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQR 186 (267)
T ss_pred CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhh
Confidence 3556799999987642221 24432 223777744322 11 11 588887776643
Done!