BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010519
(508 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 270 bits (691), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 165 PEISHLGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQ 224
PE+ HLG F+LR+L++A++ FS +N+LG GG+G VYKGRL +G+ VAVK+L Q
Sbjct: 18 PEV-HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQ 76
Query: 225 A-EKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNL 283
E +F+ EVE I H+NL+RL G+C+ R+LVY Y+ NG++ L +Q L
Sbjct: 77 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPL 136
Query: 284 TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGE 343
W R ++ +G+A+ LAYLH+ +PK++HRD+K++NIL+D+EF A V DFGLAKL+D +
Sbjct: 137 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 196
Query: 344 SHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPAN--EVNL 401
H+ V GT G++APEY +TG +EK+D++ +GV+LLE +TG+ D R AN +V L
Sbjct: 197 XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 256
Query: 402 VEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
++W+K ++ ++ E +VD +L+ +++ + VAL C +RPKMS+VVRMLE
Sbjct: 257 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
Query: 462 D 462
D
Sbjct: 317 D 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/301 (43%), Positives = 200/301 (66%), Gaps = 4/301 (1%)
Query: 165 PEISHLGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQ 224
PE+ HLG F+LR+L++A++ F +N+LG GG+G VYKGRL +G VAVK+L Q
Sbjct: 10 PEV-HLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQ 68
Query: 225 A-EKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNL 283
E +F+ EVE I H+NL+RL G+C+ R+LVY Y+ NG++ L +Q L
Sbjct: 69 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPL 128
Query: 284 TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGE 343
W R ++ +G+A+ LAYLH+ +PK++HRD+K++NIL+D+EF A V DFGLAKL+D +
Sbjct: 129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 188
Query: 344 SHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPAN--EVNL 401
H+ V G G++APEY +TG +EK+D++ +GV+LLE +TG+ D R AN +V L
Sbjct: 189 XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
Query: 402 VEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
++W+K ++ ++ E +VD +L+ +++ + VAL C +RPKMS+VVRMLE
Sbjct: 249 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
Query: 462 D 462
D
Sbjct: 309 D 309
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 173/284 (60%), Gaps = 4/284 (1%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIG 237
L DLE ATN F + ++G G +G VYKG L +G++VA+K+ Q +EF E+E +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 238 HVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
RH +LV L+G+C E +L+Y+Y+ NGNL++ L+G+ +++WE R+++ IG A+
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL-LDSGESHITTRVMGTFGY 356
L YLH ++HRD+KS NIL+D+ F K++DFG++K + G++H+ V GT GY
Sbjct: 151 GLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEE 416
+ PEY G L EKSD+YSFGV+L E + R + P VNL EW + E+
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 417 VVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+VDPNL K +L++ A++C+ SE RP M V+ LE
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 172/284 (60%), Gaps = 4/284 (1%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIG 237
L DLE ATN F + ++G G +G VYKG L +G++VA+K+ Q +EF E+E +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 238 HVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
RH +LV L+G+C E +L+Y+Y+ NGNL++ L+G+ +++WE R+++ IG A+
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL-LDSGESHITTRVMGTFGY 356
L YLH ++HRD+KS NIL+D+ F K++DFG++K + ++H+ V GT GY
Sbjct: 151 GLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEE 416
+ PEY G L EKSD+YSFGV+L E + R + P VNL EW + E+
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 417 VVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+VDPNL K +L++ A++C+ SE RP M V+ LE
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 170/298 (57%), Gaps = 19/298 (6%)
Query: 174 HWFTLRDLEIATNRFSAE------NVLGEGGYGVVYKGRLINGSEVAVKKLLNNLG---- 223
H F+ +L+ TN F N +GEGG+GVVYKG +N + VAVKKL +
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTE 71
Query: 224 QAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNL 283
+ +++F E++ + +H+NLV LLG+ +G LVY Y+ NG+L L + L
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPL 130
Query: 284 TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDS-G 342
+W R K+ G A + +LHE +HRDIKS+NIL+D+ F AK+SDFGLA+ +
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 343 ESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLV 402
++ + +R++GT Y+APE A G + KSDIYSFGV+LLE +TG VD R ++ L
Sbjct: 188 QTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLD 245
Query: 403 EWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
++ + E+ +D + +T +++ VA +C+ KRP + +V ++L+
Sbjct: 246 IKEEIEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 169/298 (56%), Gaps = 19/298 (6%)
Query: 174 HWFTLRDLEIATNRFSAE------NVLGEGGYGVVYKGRLINGSEVAVKKLLNNLG---- 223
H F+ +L+ TN F N +GEGG+GVVYKG +N + VAVKKL +
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTE 71
Query: 224 QAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNL 283
+ +++F E++ + +H+NLV LLG+ +G LVY Y+ NG+L L + L
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPL 130
Query: 284 TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDS-G 342
+W R K+ G A + +LHE +HRDIKS+NIL+D+ F AK+SDFGLA+ +
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 343 ESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLV 402
++ + R++GT Y+APE A G + KSDIYSFGV+LLE +TG VD R ++ L
Sbjct: 188 QTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLD 245
Query: 403 EWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
++ + E+ +D + +T +++ VA +C+ KRP + +V ++L+
Sbjct: 246 IKEEIEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 168/298 (56%), Gaps = 19/298 (6%)
Query: 174 HWFTLRDLEIATNRFSAE------NVLGEGGYGVVYKGRLINGSEVAVKKLLNNLG---- 223
H F+ +L+ TN F N +GEGG+GVVYKG +N + VAVKKL +
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTE 65
Query: 224 QAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNL 283
+ +++F E++ + +H+NLV LLG+ +G LVY Y+ NG+L L + L
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPL 124
Query: 284 TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDS-G 342
+W R K+ G A + +LHE +HRDIKS+NIL+D+ F AK+SDFGLA+ +
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 343 ESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLV 402
+ + R++GT Y+APE A G + KSDIYSFGV+LLE +TG VD R ++ L
Sbjct: 182 QXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLD 239
Query: 403 EWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
++ + E+ +D + +T +++ VA +C+ KRP + +V ++L+
Sbjct: 240 IKEEIEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 163/298 (54%), Gaps = 19/298 (6%)
Query: 174 HWFTLRDLEIATNRFSAE------NVLGEGGYGVVYKGRLINGSEVAVKKLLNNLG---- 223
H F+ +L+ TN F N GEGG+GVVYKG +N + VAVKKL +
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTE 62
Query: 224 QAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNL 283
+ +++F E++ +H+NLV LLG+ +G LVY Y NG+L L + L
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPL 121
Query: 284 TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGE 343
+W R K+ G A + +LHE +HRDIKS+NIL+D+ F AK+SDFGLA+ +
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 344 SHI-TTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLV 402
+ +R++GT Y APE A G + KSDIYSFGV+LLE +TG VD R ++ L
Sbjct: 179 QXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLD 236
Query: 403 EWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
++ + E+ +D +T +++ VA +C+ KRP + +V ++L+
Sbjct: 237 IKEEIEDEEKTIEDYIDKKXNDADST-SVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 121/226 (53%), Gaps = 8/226 (3%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEK--EFRVEVEAIG 237
D++I + + +G G +G V++ +GS+VAVK L+ AE+ EF EV +
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 238 HVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLH-GAMRNQGNLTWEARMKVIIGTA 296
+RH N+V +G + + +V EY++ G+L + LH R Q L R+ + A
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVA 147
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGY 356
K + YLH P +VHRD+KS N+L+D ++ KV DFGL++ L + + GT +
Sbjct: 148 KGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEW 205
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLV 402
+APE NEKSD+YSFGV+L E T + P PA V V
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV 251
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 124/227 (54%), Gaps = 10/227 (4%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEK--EFRVEVEAIG 237
D++I + + +G G +G V++ +GS+VAVK L+ AE+ EF EV +
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 238 HVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLH-GAMRNQGNLTWEARMKVIIGTA 296
+RH N+V +G + + +V EY++ G+L + LH R Q L R+ + A
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVA 147
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR-VMGTFG 355
K + YLH P +VHR++KS N+L+D ++ KV DFGL++L + ++++ GT
Sbjct: 148 KGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPE 204
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLV 402
++APE NEKSD+YSFGV+L E T + P PA V V
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV 251
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 143/303 (47%), Gaps = 60/303 (19%)
Query: 181 LEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNN----LGQAEKEFRVEVEAI 236
LEI + E ++G GG+G VY+ I G EVAVK ++ + Q + R E +
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 237 GHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLT-WEARMKVIIGT 295
++H N++ L G C++ + LV E+ G L + L G L W ++
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ 114
Query: 296 AKALAYLH-EAIEPKVVHRDIKSSNILIDDEFN--------AKVSDFGLAKLLDSGESHI 346
A+ + YLH EAI P ++HRD+KSSNILI + K++DFGLA+ E H
Sbjct: 115 ARGMNYLHDEAIVP-IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHR 168
Query: 347 TTRV--MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP--------VDYGRPA 396
TT++ G + ++APE M ++ SD++S+GVLL E +TG P V YG
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM 228
Query: 397 NEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
N++ L P+ +P + ++ C +PD RP + ++
Sbjct: 229 NKLAL----------------PIPSTCPEPFAKLME-------DCWNPDPHSRPSFTNIL 265
Query: 457 RML 459
L
Sbjct: 266 DQL 268
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 151/299 (50%), Gaps = 52/299 (17%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGRLI-NGSEVAVKKLLNNLGQAE---------KEFRVE 232
+A N E +G+GG+G+V+KGRL+ + S VA+K L+ LG +E +EF+ E
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLI--LGDSEGETEMIEKFQEFQRE 73
Query: 233 VEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVI 292
V + ++ H N+V+L G + RM V E+V G+L H + + W +++++
Sbjct: 74 VFIMSNLNHPNIVKLYG-LMHNPPRM-VMEFVPCGDL---YHRLLDKAHPIKWSVKLRLM 128
Query: 293 IGTAKALAYLHEAIEPKVVHRDIKSSNILID--DE---FNAKVSDFGLAKLLDSGESHIT 347
+ A + Y+ P +VHRD++S NI + DE AKV+DFGL++ H
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSV 183
Query: 348 TRVMGTFGYVAPEY--ANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLV 402
+ ++G F ++APE A EK+D YSF ++L +TG P D YG+ +
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-------I 236
Query: 403 EWLKMMVGTRRAEEVVDPNL--EVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRML 459
+++ M+ EE + P + + P R V C D +KRP S +V+ L
Sbjct: 237 KFINMI-----REEGLRPTIPEDCPPRLRN------VIELCWSGDPKKRPHFSYIVKEL 284
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 138/281 (49%), Gaps = 31/281 (11%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHK 242
I E V+G G +GVV K + +VA+K++ + K F VE+ + V H
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHP 62
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYL 302
N+V+L G C+ V LV EY G+L LHGA T M + ++ +AYL
Sbjct: 63 NIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGA-EPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 303 HEAIEPK-VVHRDIKSSNILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
H +++PK ++HRD+K N+L+ K+ DFG A + ++H+T G+ ++APE
Sbjct: 120 H-SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPE 174
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVD-YGRPANEVNLVEWLKMMVGTRRAEEVVD 419
+EK D++S+G++L E +T R P D G PA + + GTR
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA----VHNGTR------- 223
Query: 420 PNLEVKPATRALKRSL-LVALRCVDPDSEKRPKMSQVVRML 459
P + L + + + RC D +RP M ++V+++
Sbjct: 224 -----PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 138/281 (49%), Gaps = 31/281 (11%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHK 242
I E V+G G +GVV K + +VA+K++ + K F VE+ + V H
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHP 61
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYL 302
N+V+L G C+ V LV EY G+L LHGA T M + ++ +AYL
Sbjct: 62 NIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGA-EPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 303 HEAIEPK-VVHRDIKSSNILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
H +++PK ++HRD+K N+L+ K+ DFG A + ++H+T G+ ++APE
Sbjct: 119 H-SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPE 173
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVD-YGRPANEVNLVEWLKMMVGTRRAEEVVD 419
+EK D++S+G++L E +T R P D G PA + + GTR
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA----VHNGTR------- 222
Query: 420 PNLEVKPATRALKRSL-LVALRCVDPDSEKRPKMSQVVRML 459
P + L + + + RC D +RP M ++V+++
Sbjct: 223 -----PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 150/299 (50%), Gaps = 52/299 (17%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGRLI-NGSEVAVKKLLNNLGQAE---------KEFRVE 232
+A N E +G+GG+G+V+KGRL+ + S VA+K L+ LG +E +EF+ E
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLI--LGDSEGETEMIEKFQEFQRE 73
Query: 233 VEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVI 292
V + ++ H N+V+L G + RM V E+V G+L H + + W +++++
Sbjct: 74 VFIMSNLNHPNIVKLYG-LMHNPPRM-VMEFVPCGDL---YHRLLDKAHPIKWSVKLRLM 128
Query: 293 IGTAKALAYLHEAIEPKVVHRDIKSSNILID--DE---FNAKVSDFGLAKLLDSGESHIT 347
+ A + Y+ P +VHRD++S NI + DE AKV+DFG ++ H
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSV 183
Query: 348 TRVMGTFGYVAPEY--ANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLV 402
+ ++G F ++APE A EK+D YSF ++L +TG P D YG+ +
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-------I 236
Query: 403 EWLKMMVGTRRAEEVVDPNL--EVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRML 459
+++ M+ EE + P + + P R V C D +KRP S +V+ L
Sbjct: 237 KFINMI-----REEGLRPTIPEDCPPRLRN------VIELCWSGDPKKRPHFSYIVKEL 284
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 150/299 (50%), Gaps = 52/299 (17%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGRLI-NGSEVAVKKLLNNLGQAE---------KEFRVE 232
+A N E +G+GG+G+V+KGRL+ + S VA+K L+ LG +E +EF+ E
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLI--LGDSEGETEMIEKFQEFQRE 73
Query: 233 VEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVI 292
V + ++ H N+V+L G + RM V E+V G+L H + + W +++++
Sbjct: 74 VFIMSNLNHPNIVKLYG-LMHNPPRM-VMEFVPCGDL---YHRLLDKAHPIKWSVKLRLM 128
Query: 293 IGTAKALAYLHEAIEPKVVHRDIKSSNILID--DE---FNAKVSDFGLAKLLDSGESHIT 347
+ A + Y+ P +VHRD++S NI + DE AKV+DF L++ H
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSV 183
Query: 348 TRVMGTFGYVAPEY--ANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLV 402
+ ++G F ++APE A EK+D YSF ++L +TG P D YG+ +
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-------I 236
Query: 403 EWLKMMVGTRRAEEVVDPNL--EVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRML 459
+++ M+ EE + P + + P R V C D +KRP S +V+ L
Sbjct: 237 KFINMI-----REEGLRPTIPEDCPPRLRN------VIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 135/289 (46%), Gaps = 34/289 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE---FRVEVE 234
E+ S + V+G G +G V GRL S+ VA+K L +G EK+ F E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEAS 98
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+G H N++RL G + M+V EY+ NG+L+ +L ++ T + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRG 155
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG- 352
A + YL + VHRD+ + NILI+ KVSDFGLA++L D E+ TTR
Sbjct: 156 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI 212
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGT 411
+ +PE SD++S+G++L E ++ YG RP E++ + +K
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----- 261
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
VD + P + L C D RPK Q+V +L+
Sbjct: 262 -----AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 123/277 (44%), Gaps = 26/277 (9%)
Query: 168 SHLGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNL 222
SH+ + L D EI LG+G +G VY R I +V K L
Sbjct: 2 SHMSKKRQWALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA 54
Query: 223 GQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN 282
G E + R EVE H+RH N++RL GY + L+ EY G + + L +
Sbjct: 55 G-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 113
Query: 283 LTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSG 342
T I A AL+Y H +V+HRDIK N+L+ K++DFG + S
Sbjct: 114 RT----ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 166
Query: 343 ESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEV 399
T + GT Y+ PE M +EK D++S GVL E + G+ P + Y +
Sbjct: 167 RR---TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 400 NLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLL 436
+ VE+ T A +++ L+ P+ R + R +L
Sbjct: 224 SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 135/289 (46%), Gaps = 34/289 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE---FRVEVE 234
E+ S + V+G G +G V GRL S+ VA+K L +G EK+ F E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEAS 98
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+G H N++RL G + M+V EY+ NG+L+ +L ++ T + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRG 155
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG- 352
A + YL + VHRD+ + NILI+ KVSDFGL+++L D E+ TTR
Sbjct: 156 IASGMKYLSDM---GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGT 411
+ +PE SD++S+G++L E ++ YG RP E++ + +K
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----- 261
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
VD + P + L C D RPK Q+V +L+
Sbjct: 262 -----AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 123/269 (45%), Gaps = 26/269 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
+ L D EI LG+G +G VY R I +V K L G E + R
Sbjct: 10 WALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLR 61
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRT----AT 117
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
I A AL+Y H +V+HRDIK N+L+ K++DFG + + + S TT +
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-L 171
Query: 351 MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKM 407
GT Y+ PE M +EK D++S GVL E + G+ P + Y ++ VE+
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLL 436
T A +++ L+ P+ R + R +L
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 135/289 (46%), Gaps = 34/289 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE---FRVEVE 234
E+ S + V+G G +G V GRL S+ VA+K L +G EK+ F E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEAS 98
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+G H N++RL G + M+V EY+ NG+L+ +L ++ T + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRG 155
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG- 352
A + YL + VHRD+ + NILI+ KVSDFGL+++L D E+ TTR
Sbjct: 156 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGT 411
+ +PE SD++S+G++L E ++ YG RP E++ + +K
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----- 261
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
VD + P + L C D RPK Q+V +L+
Sbjct: 262 -----AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 135/289 (46%), Gaps = 34/289 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE---FRVEVE 234
E+ S + V+G G +G V GRL S+ VA+K L +G EK+ F E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEAS 98
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+G H N++RL G + M+V EY+ NG+L+ +L ++ T + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRG 155
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG- 352
A + YL + VHRD+ + NILI+ KVSDFGL+++L D E+ TTR
Sbjct: 156 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGT 411
+ +PE SD++S+G++L E ++ YG RP E++ + +K
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----- 261
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
VD + P + L C D RPK Q+V +L+
Sbjct: 262 -----AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 135/289 (46%), Gaps = 34/289 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE---FRVEVE 234
E+ S + V+G G +G V GRL S+ VA+K L +G EK+ F E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEAS 98
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+G H N++RL G + M+V EY+ NG+L+ +L ++ T + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRG 155
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG- 352
A + YL + VHRD+ + NILI+ KVSDFGL+++L D E+ TTR
Sbjct: 156 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGT 411
+ +PE SD++S+G++L E ++ YG RP E++ + +K
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----- 261
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
VD + P + L C D RPK Q+V +L+
Sbjct: 262 -----AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 135/289 (46%), Gaps = 34/289 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE---FRVEVE 234
E+ S + V+G G +G V GRL S+ VA+K L +G EK+ F E
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEAS 69
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+G H N++RL G + M+V EY+ NG+L+ +L ++ T + ++ G
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRG 126
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG- 352
A + YL + VHRD+ + NILI+ KVSDFGL+++L D E+ TTR
Sbjct: 127 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGT 411
+ +PE SD++S+G++L E ++ YG RP E++ + +K
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----- 232
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
VD + P + L C D RPK Q+V +L+
Sbjct: 233 -----AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 135/289 (46%), Gaps = 34/289 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE---FRVEVE 234
E+ S + V+G G +G V GRL S+ VA+K L +G EK+ F E
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEAS 86
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+G H N++RL G + M+V EY+ NG+L+ +L ++ T + ++ G
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRG 143
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG- 352
A + YL + VHRD+ + NILI+ KVSDFGL+++L D E+ TTR
Sbjct: 144 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 200
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGT 411
+ +PE SD++S+G++L E ++ YG RP E++ + +K
Sbjct: 201 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----- 249
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
VD + P + L C D RPK Q+V +L+
Sbjct: 250 -----AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 293
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 135/289 (46%), Gaps = 34/289 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE---FRVEVE 234
E+ S + V+G G +G V GRL S+ VA+K L +G EK+ F E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEAS 98
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+G H N++RL G + M+V EY+ NG+L+ +L ++ T + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRG 155
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG- 352
A + YL + VHRD+ + NILI+ KVSDFGL+++L D E+ TTR
Sbjct: 156 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGT 411
+ +PE SD++S+G++L E ++ YG RP E++ + +K
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----- 261
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
VD + P + L C D RPK Q+V +L+
Sbjct: 262 -----AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 135/289 (46%), Gaps = 34/289 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE---FRVEVE 234
E+ S + V+G G +G V GRL S+ VA+K L +G EK+ F E
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEAS 96
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+G H N++RL G + M+V EY+ NG+L+ +L ++ T + ++ G
Sbjct: 97 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRG 153
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG- 352
A + YL + VHRD+ + NILI+ KVSDFGL+++L D E+ TTR
Sbjct: 154 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 210
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGT 411
+ +PE SD++S+G++L E ++ YG RP E++ + +K
Sbjct: 211 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----- 259
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
VD + P + L C D RPK Q+V +L+
Sbjct: 260 -----AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 303
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 134/289 (46%), Gaps = 34/289 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE---FRVEVE 234
E+ S + V+G G +G V GRL S+ VA+K L +G EK+ F E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEAS 98
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+G H N++RL G + M+V EY+ NG+L+ +L ++ T + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRG 155
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG- 352
A + YL + VHRD+ + NILI+ KVSDFGL ++L D E+ TTR
Sbjct: 156 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI 212
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGT 411
+ +PE SD++S+G++L E ++ YG RP E++ + +K
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----- 261
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
VD + P + L C D RPK Q+V +L+
Sbjct: 262 -----AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 135/290 (46%), Gaps = 34/290 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRL-INGSE---VAVKKLLNNLGQAEK-EFRVEVEAI 236
EI +R E ++G G G V GRL + G VA+K L + ++ +F E +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 237 GHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
G H N++RL G G M+V EY+ NG+L+ +L + G T + ++ G
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR---THDGQFTIMQLVGMLRGVG 161
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTF 354
+ YL + VHRD+ + N+L+D KVSDFGL+++L D ++ TT
Sbjct: 162 AGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPI 218
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPA-NEVNLVEWLKMMVGTR 412
+ APE + SD++SFGV++ E + YG RP N N R
Sbjct: 219 RWTAPEAIAFRTFSSASDVWSFGVVMWEVLA------YGERPYWNMTN-----------R 261
Query: 413 RAEEVVDPNLEVKPATRALKRSL-LVALRCVDPDSEKRPKMSQVVRMLEA 461
V+ + PA +L + L C D +RP+ SQ+V +L+A
Sbjct: 262 DVISSVEEGYRL-PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 123/269 (45%), Gaps = 26/269 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
+ L D EI LG+G +G VY R I +V K L G E + R
Sbjct: 31 WALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLR 82
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----AT 138
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
I A AL+Y H +V+HRDIK N+L+ K++DFG + + + S TT +
Sbjct: 139 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-L 192
Query: 351 MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKM 407
GT Y+ PE M +EK D++S GVL E + G+ P + Y ++ VE+
Sbjct: 193 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 252
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLL 436
T A +++ L+ P+ R + R +L
Sbjct: 253 DFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 123/269 (45%), Gaps = 26/269 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
+ L D EI LG+G +G VY R I +V K L G E + R
Sbjct: 8 WALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLR 59
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----AT 115
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
I A AL+Y H +V+HRDIK N+L+ K++DFG + + + S TT +
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-L 169
Query: 351 MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKM 407
GT Y+ PE M +EK D++S GVL E + G+ P + Y ++ VE+
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLL 436
T A +++ L+ P+ R + R +L
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 123/269 (45%), Gaps = 26/269 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
+ L D EI LG+G +G VY R I +V K L G E + R
Sbjct: 22 WALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLR 73
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 74 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----AT 129
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
I A AL+Y H +V+HRDIK N+L+ K++DFG + + + S TT +
Sbjct: 130 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-L 183
Query: 351 MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKM 407
GT Y+ PE M +EK D++S GVL E + G+ P + Y ++ VE+
Sbjct: 184 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 243
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLL 436
T A +++ L+ P+ R + R +L
Sbjct: 244 DFVTEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 123/269 (45%), Gaps = 26/269 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
+ L D EI LG+G +G VY R I +V K L G E + R
Sbjct: 10 WALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLR 61
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----AT 117
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
I A AL+Y H +V+HRDIK N+L+ K++DFG + + + S TT +
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-L 171
Query: 351 MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKM 407
GT Y+ PE M +EK D++S GVL E + G+ P + Y ++ VE+
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLL 436
T A +++ L+ P+ R + R +L
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 120/269 (44%), Gaps = 26/269 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
+ L D EI LG+G +G VY R I +V K L G E + R
Sbjct: 5 WALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLR 56
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----AT 112
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
I A AL+Y H +V+HRDIK N+L+ K++DFG + S T +
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TEL 166
Query: 351 MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKM 407
GT Y+ PE M +EK D++S GVL E + G+ P + Y ++ VE+
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLL 436
T A +++ L+ P+ R + R +L
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 123/269 (45%), Gaps = 26/269 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
+ L D EI LG+G +G VY R I +V K L G E + R
Sbjct: 5 WALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLR 56
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----AT 112
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
I A AL+Y H +V+HRDIK N+L+ K++DFG + + + S TT +
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-L 166
Query: 351 MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKM 407
GT Y+ PE M +EK D++S GVL E + G+ P + Y ++ VE+
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLL 436
T A +++ L+ P+ R + R +L
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 120/261 (45%), Gaps = 19/261 (7%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGH 238
A F LG+G +G VY R I +V K L G E + R EVE H
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSH 63
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+RH N++RL GY + L+ EY G + + L + T I A A
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----ATYITELANA 119
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L+Y H +V+HRDIK N+L+ K++DFG + + + S TT + GT Y+
Sbjct: 120 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDYLP 173
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKMMVGTRRAE 415
PE M +EK D++S GVL E + G+ P + Y ++ VE+ T A
Sbjct: 174 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR 233
Query: 416 EVVDPNLEVKPATRALKRSLL 436
+++ L+ P+ R + R +L
Sbjct: 234 DLISRLLKHNPSQRPMLREVL 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 120/261 (45%), Gaps = 19/261 (7%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGH 238
A F LG+G +G VY R I +V K L G E + R EVE H
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSH 67
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+RH N++RL GY + L+ EY G + + L + T I A A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----ATYITELANA 123
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L+Y H +V+HRDIK N+L+ K++DFG + + + S TT + GT Y+
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDYLP 177
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKMMVGTRRAE 415
PE M +EK D++S GVL E + G+ P + Y ++ VE+ T A
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR 237
Query: 416 EVVDPNLEVKPATRALKRSLL 436
+++ L+ P+ R + R +L
Sbjct: 238 DLISRLLKHNPSQRPMLREVL 258
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 117/261 (44%), Gaps = 19/261 (7%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGH 238
A F LG+G +G VY R I +V K L G E + R EVE H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSH 64
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+RH N++RL GY + L+ EY G + + L + T I A A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----ATYITELANA 120
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L+Y H +V+HRDIK N+L+ K++DFG + S T + GT Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TXLCGTLDYLP 174
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKMMVGTRRAE 415
PE M +EK D++S GVL E + G+ P + Y ++ VE+ T A
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR 234
Query: 416 EVVDPNLEVKPATRALKRSLL 436
+++ L+ P+ R + R +L
Sbjct: 235 DLISRLLKHNPSQRPMLREVL 255
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 94
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 95 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 146
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES---HITTRVMGTFGYV 357
YL K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 147 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWM 203
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 258
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 259 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 292
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 120/261 (45%), Gaps = 19/261 (7%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGH 238
A F LG+G +G VY R I +V K L G E + R EVE H
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAG-VEHQLRREVEIQSH 61
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+RH N++RL GY + L+ EY G + + L + T I A A
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----ATYITELANA 117
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L+Y H +V+HRDIK N+L+ K++DFG + + + S TT + GT Y+
Sbjct: 118 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDYLP 171
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKMMVGTRRAE 415
PE M +EK D++S GVL E + G+ P + Y ++ VE+ T A
Sbjct: 172 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR 231
Query: 416 EVVDPNLEVKPATRALKRSLL 436
+++ L+ P+ R + R +L
Sbjct: 232 DLISRLLKHNPSQRPMLREVL 252
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 120/269 (44%), Gaps = 26/269 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
+ L D EI LG+G +G VY R I +V K L G E + R
Sbjct: 6 WALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLR 57
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----AT 113
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
I A AL+Y H +V+HRDIK N+L+ K++DFG + S T +
Sbjct: 114 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTL 167
Query: 351 MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKM 407
GT Y+ PE M +EK D++S GVL E + G+ P + Y ++ VE+
Sbjct: 168 SGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 227
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLL 436
T A +++ L+ P+ R + R +L
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 133/290 (45%), Gaps = 34/290 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRL-INGSE---VAVKKLLNNLGQAEK-EFRVEVEAI 236
EI +R E ++G G G V GRL + G VA+K L + ++ +F E +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 237 GHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
G H N++RL G G M+V EY+ NG+L+ +L + G T + ++ G
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR---THDGQFTIMQLVGMLRGVG 161
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFG- 355
+ YL + VHRD+ + N+L+D KVSDFGL+++L+ T G
Sbjct: 162 AGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPI 218
Query: 356 -YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPA-NEVNLVEWLKMMVGTR 412
+ APE + SD++SFGV++ E + YG RP N N R
Sbjct: 219 RWTAPEAIAFRTFSSASDVWSFGVVMWEVLA------YGERPYWNMTN-----------R 261
Query: 413 RAEEVVDPNLEVKPATRALKRSL-LVALRCVDPDSEKRPKMSQVVRMLEA 461
V+ + PA +L + L C D +RP+ SQ+V +L+A
Sbjct: 262 DVISSVEEGYRL-PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 120/269 (44%), Gaps = 26/269 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
+ L D EI LG+G +G VY R I +V K L G E + R
Sbjct: 6 WALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLR 57
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----AT 113
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
I A AL+Y H +V+HRDIK N+L+ K++DFG + S T +
Sbjct: 114 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDL 167
Query: 351 MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKM 407
GT Y+ PE M +EK D++S GVL E + G+ P + Y ++ VE+
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 227
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLL 436
T A +++ L+ P+ R + R +L
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 113
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 114 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 165
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES---HITTRVMGTFGYV 357
YL K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 166 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 222
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 277
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 278 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 311
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 120/261 (45%), Gaps = 19/261 (7%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGH 238
A F LG+G +G VY R I +V K L G E + R EVE H
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSH 68
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+RH N++RL GY + L+ EY G + + L + T I A A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----ATYITELANA 124
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L+Y H +V+HRDIK N+L+ K++DFG + + + S TT + GT Y+
Sbjct: 125 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDYLP 178
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKMMVGTRRAE 415
PE M +EK D++S GVL E + G+ P + Y ++ VE+ T A
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR 238
Query: 416 EVVDPNLEVKPATRALKRSLL 436
+++ L+ P+ R + R +L
Sbjct: 239 DLISRLLKHNPSQRPMLREVL 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 117/261 (44%), Gaps = 19/261 (7%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGH 238
A F LG+G +G VY R I +V K L G E + R EVE H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSH 64
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+RH N++RL GY + L+ EY G + + L + T I A A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----ATYITELANA 120
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L+Y H +V+HRDIK N+L+ K++DFG + S T + GT Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLP 174
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKMMVGTRRAE 415
PE M +EK D++S GVL E + G+ P + Y ++ VE+ T A
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR 234
Query: 416 EVVDPNLEVKPATRALKRSLL 436
+++ L+ P+ R + R +L
Sbjct: 235 DLISRLLKHNPSQRPMLREVL 255
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 114
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 115 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 166
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES---HITTRVMGTFGYV 357
YL K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 167 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 223
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 278
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 279 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 312
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 117/261 (44%), Gaps = 19/261 (7%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGH 238
A F LG+G +G VY R I +V K L G E + R EVE H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSH 64
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+RH N++RL GY + L+ EY G + + L + T I A A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----ATYITELANA 120
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L+Y H +V+HRDIK N+L+ K++DFG + S T + GT Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLP 174
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKMMVGTRRAE 415
PE M +EK D++S GVL E + G+ P + Y ++ VE+ T A
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR 234
Query: 416 EVVDPNLEVKPATRALKRSLL 436
+++ L+ P+ R + R +L
Sbjct: 235 DLISRLLKHNPSQRPMLREVL 255
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 87
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 88 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 139
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES---HITTRVMGTFGYV 357
YL K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 140 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 196
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 251
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 252 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 285
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 130/269 (48%), Gaps = 24/269 (8%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIE 253
+G G +G+V+ G +N +VA+K + +E++F E E + + H LV+L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 254 GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHR 313
LV+E++ +G L +L +G E + + + + +AYL EA V+HR
Sbjct: 74 QAPICLVFEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEA---SVIHR 127
Query: 314 DIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDI 373
D+ + N L+ + KVSDFG+ + + + +T + +PE + + KSD+
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 374 YSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALK 432
+SFGVL+ E + G+ P + R +EV VE + G R + P L + +
Sbjct: 188 WSFGVLMWEVFSEGKIPYE-NRSNSEV--VE--DISTGFR----LYKPRLASTHVYQIMN 238
Query: 433 RSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
C E RP S+++R L A
Sbjct: 239 -------HCWKERPEDRPAFSRLLRQLAA 260
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 94
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 95 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 146
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES---HITTRVMGTFGYV 357
YL K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 147 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 203
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 258
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 259 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 292
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 93
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 94 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 145
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES---HITTRVMGTFGYV 357
YL K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 146 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 202
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 257
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 258 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 291
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 90
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 91 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 142
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES---HITTRVMGTFGYV 357
YL K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 143 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 199
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 254
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 255 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 288
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 95
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 96 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 147
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES---HITTRVMGTFGYV 357
YL K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 148 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 259
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 260 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 95
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 96 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 147
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES---HITTRVMGTFGYV 357
YL K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 148 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 259
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 260 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 92
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 93 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 144
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES---HITTRVMGTFGYV 357
YL K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 145 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 201
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 256
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 257 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 290
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 119/269 (44%), Gaps = 26/269 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
+ L D EI LG+G +G VY R I +V K L G E + R
Sbjct: 10 WALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLR 61
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EVE H+RH N++RL GY + L+ EY G ++ ++ +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGE----VYKELQKLSKFDEQRTAT 117
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
I A AL+Y H +V+HRDIK N+L+ K++DFG + S +
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXL 171
Query: 351 MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKM 407
GT Y+ PE M +EK D++S GVL E + G+ P + Y ++ VE+
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLL 436
T A +++ L+ P+ R + R +L
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 105/199 (52%), Gaps = 8/199 (4%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIE 253
+G G +G+V+ G +N +VA+K + +E++F E E + + H LV+L G C+E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 254 GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHR 313
LV+E++ +G L +L +G E + + + + +AYL EA V+HR
Sbjct: 72 QAPICLVFEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 125
Query: 314 DIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDI 373
D+ + N L+ + KVSDFG+ + + + +T + +PE + + KSD+
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 374 YSFGVLLLEAVT-GRDPVD 391
+SFGVL+ E + G+ P +
Sbjct: 186 WSFGVLMWEVFSEGKIPYE 204
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 129/265 (48%), Gaps = 31/265 (11%)
Query: 193 VLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYC 251
VLG+G YG+VY GR L N +A+K++ + + E+ H++HKN+V+ LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 252 IEGVHRMLVYEYVNNGNLEQWLH---GAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
E + E V G+L L G +++ +++ G L YLH+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG----LKYLHDN--- 141
Query: 309 KVVHRDIKSSNILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGM- 366
++VHRDIK N+LI+ K+SDFG +K L +G + T GT Y+APE + G
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 367 -LNEKSDIYSFGVLLLEAVTGRDPV-DYGRPANEVNLVEWLKMMVGTRRAEEVVDPNLEV 424
+ +DI+S G ++E TG+ P + G P + V K V P E+
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK-----------VHP--EI 247
Query: 425 KPATRALKRSLLVALRCVDPDSEKR 449
+ A ++ + L+C +PD +KR
Sbjct: 248 PESMSAEAKAFI--LKCFEPDPDKR 270
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 105/199 (52%), Gaps = 8/199 (4%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIE 253
+G G +G+V+ G +N +VA+K + +E++F E E + + H LV+L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 254 GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHR 313
LV+E++ +G L +L +G E + + + + +AYL EA V+HR
Sbjct: 74 QAPICLVFEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 127
Query: 314 DIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDI 373
D+ + N L+ + KVSDFG+ + + + +T + +PE + + KSD+
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 374 YSFGVLLLEAVT-GRDPVD 391
+SFGVL+ E + G+ P +
Sbjct: 188 WSFGVLMWEVFSEGKIPYE 206
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 105/199 (52%), Gaps = 8/199 (4%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIE 253
+G G +G+V+ G +N +VA+K + +E++F E E + + H LV+L G C+E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 254 GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHR 313
LV+E++ +G L +L +G E + + + + +AYL EA V+HR
Sbjct: 77 QAPICLVFEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 130
Query: 314 DIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDI 373
D+ + N L+ + KVSDFG+ + + + +T + +PE + + KSD+
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 374 YSFGVLLLEAVT-GRDPVD 391
+SFGVL+ E + G+ P +
Sbjct: 191 WSFGVLMWEVFSEGKIPYE 209
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 134/289 (46%), Gaps = 34/289 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE---FRVEVE 234
E+ S + V+G G +G V GRL S+ VA+K L +G EK+ F E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEAS 98
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+G H N++RL G + M+V E + NG+L+ +L ++ T + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR---KHDAQFTVIQLVGMLRG 155
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG- 352
A + YL + VHRD+ + NILI+ KVSDFGL+++L D E+ TTR
Sbjct: 156 IASGMKYLSDM---GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGT 411
+ +PE SD++S+G++L E ++ YG RP E++ + +K
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----- 261
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
VD + P + L C D RPK Q+V +L+
Sbjct: 262 -----AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 123/269 (45%), Gaps = 26/269 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
+ L D EI LG+G +G VY R I +V K L G E + R
Sbjct: 7 WALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLR 58
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----AT 114
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
I A AL+Y H +V+HRDIK N+L+ K+++FG + + + S TT +
Sbjct: 115 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT-L 168
Query: 351 MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKM 407
GT Y+ PE M +EK D++S GVL E + G+ P + Y ++ VE+
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 228
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLL 436
T A +++ L+ P+ R + R +L
Sbjct: 229 DFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 119/269 (44%), Gaps = 26/269 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
+ L D EI LG+G +G VY R I +V K L G E + R
Sbjct: 7 WALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLR 58
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----AT 114
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
I A AL+Y H +V+HRDIK N+L+ K++DFG + S +
Sbjct: 115 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXL 168
Query: 351 MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKM 407
GT Y+ PE M +EK D++S GVL E + G+ P + Y ++ VE+
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 228
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLL 436
T A +++ L+ P+ R + R +L
Sbjct: 229 DFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 121/275 (44%), Gaps = 27/275 (9%)
Query: 170 LGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQ 224
LG W L D EI LG+G +G VY R I +V K L G
Sbjct: 3 LGSRQW-ALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG- 53
Query: 225 AEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLT 284
E + R EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 285 WEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES 344
I A AL+Y H +V+HRDIK N+L+ K++DFG + S
Sbjct: 114 ----ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPS 163
Query: 345 HITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNL 401
+ GT Y+ PE M +EK D++S GVL E + G+ P + Y ++
Sbjct: 164 SRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 402 VEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLL 436
VE+ T A +++ L+ P+ R + R +L
Sbjct: 224 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 137/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 96
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 97 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 148
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDS--GESHITTRVMGTFGYV 357
+L K VHRD+ + N ++D++F KV+DFGLA+ +LD H T ++
Sbjct: 149 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWM 205
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 260
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 261 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 294
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 121/275 (44%), Gaps = 27/275 (9%)
Query: 170 LGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQ 224
+G W L D EI LG+G +G VY R I +V K L G
Sbjct: 3 MGSRQW-ALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG- 53
Query: 225 AEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLT 284
E + R EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 285 WEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES 344
I A AL+Y H +V+HRDIK N+L+ K++DFG + S
Sbjct: 114 ----ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 166
Query: 345 HITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNL 401
+ GT Y+ PE M +EK D++S GVL E + G+ P + Y ++
Sbjct: 167 ---AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 402 VEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLL 436
VE+ T A +++ L+ P+ R + R +L
Sbjct: 224 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 134/289 (46%), Gaps = 34/289 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE---FRVEVE 234
E+ S + V+G G +G V GRL S+ VA+K L +G EK+ F E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEAS 98
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+G H N++RL G + M+V E + NG+L+ +L ++ T + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR---KHDAQFTVIQLVGMLRG 155
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG- 352
A + YL + VHRD+ + NILI+ KVSDFGL+++L D E+ TTR
Sbjct: 156 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGT 411
+ +PE SD++S+G++L E ++ YG RP E++ + +K
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----- 261
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
VD + P + L C D RPK Q+V +L+
Sbjct: 262 -----AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 120/261 (45%), Gaps = 19/261 (7%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGH 238
A F LG+G +G VY R I +V K L G E + R EVE H
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSH 67
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+RH N++RL GY + L+ EY G + + L + T I A A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----ATYITELANA 123
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L+Y H +V+HRDIK N+L+ K+++FG + + + S TT + GT Y+
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT-LCGTLDYLP 177
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKMMVGTRRAE 415
PE M +EK D++S GVL E + G+ P + Y ++ VE+ T A
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR 237
Query: 416 EVVDPNLEVKPATRALKRSLL 436
+++ L+ P+ R + R +L
Sbjct: 238 DLISRLLKHNPSQRPMLREVL 258
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 134/289 (46%), Gaps = 34/289 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE---FRVEVE 234
E+ S + V+G G +G V GRL S+ VA+K L +G EK+ F E
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEAS 69
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+G H N++RL G + M+V E + NG+L+ +L ++ T + ++ G
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR---KHDAQFTVIQLVGMLRG 126
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG- 352
A + YL + VHRD+ + NILI+ KVSDFGL+++L D E+ TTR
Sbjct: 127 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGT 411
+ +PE SD++S+G++L E ++ YG RP E++ + +K
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----- 232
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
VD + P + L C D RPK Q+V +L+
Sbjct: 233 -----AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 122/269 (45%), Gaps = 26/269 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
+ L D EI LG+G +G VY R I +V K L G E + R
Sbjct: 6 WALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLR 57
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----AT 113
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
I A AL+Y H +V+HRDIK N+L+ K++DFG + + + S T +
Sbjct: 114 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDT-L 167
Query: 351 MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKM 407
GT Y+ PE M +EK D++S GVL E + G+ P + Y ++ VE+
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 227
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLL 436
T A +++ L+ P+ R + R +L
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 116/261 (44%), Gaps = 19/261 (7%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGH 238
A F LG+G +G VY R I +V K L G E + R EVE H
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSH 67
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+RH N++RL GY + L+ EY G + + L + T I A A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----ATYITELANA 123
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L+Y H +V+HRDIK N+L+ K++DFG + S + GT Y+
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLP 177
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKMMVGTRRAE 415
PE M +EK D++S GVL E + G+ P + Y ++ VE+ T A
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR 237
Query: 416 EVVDPNLEVKPATRALKRSLL 436
+++ L+ P+ R + R +L
Sbjct: 238 DLISRLLKHNPSQRPMLREVL 258
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 118/260 (45%), Gaps = 17/260 (6%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLL--NNLGQA--EKEFRVEVEAIGHV 239
A F LG+G +G VY R N + K+L L +A E + R EVE H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RH N++RL GY + L+ EY G + + L + T I A AL
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRT----ATYITELANAL 121
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAP 359
+Y H KV+HRDIK N+L+ K++DFG + S + GT Y+ P
Sbjct: 122 SYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPP 175
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKMMVGTRRAEE 416
E M +EK D++S GVL E + G+ P + Y ++ VE+ T A +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARD 235
Query: 417 VVDPNLEVKPATRALKRSLL 436
++ L+ P+ R + R +L
Sbjct: 236 LISRLLKHNPSQRPMLREVL 255
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 154
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 155 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 206
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFGYV 357
+L K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 207 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 263
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 318
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 319 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 352
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 129/265 (48%), Gaps = 31/265 (11%)
Query: 193 VLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYC 251
VLG+G YG+VY GR L N +A+K++ + + E+ H++HKN+V+ LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 252 IEGVHRMLVYEYVNNGNLEQWLH---GAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
E + E V G+L L G +++ +++ G L YLH+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG----LKYLHDN--- 127
Query: 309 KVVHRDIKSSNILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGM- 366
++VHRDIK N+LI+ K+SDFG +K L +G + T GT Y+APE + G
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 367 -LNEKSDIYSFGVLLLEAVTGRDPV-DYGRPANEVNLVEWLKMMVGTRRAEEVVDPNLEV 424
+ +DI+S G ++E TG+ P + G P + V K V P E+
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK-----------VHP--EI 233
Query: 425 KPATRALKRSLLVALRCVDPDSEKR 449
+ A ++ + L+C +PD +KR
Sbjct: 234 PESMSAEAKAFI--LKCFEPDPDKR 256
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 116/261 (44%), Gaps = 19/261 (7%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGH 238
A F LG+G +G VY R I +V K L G E + R EVE H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSH 64
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+RH N++RL GY + L+ EY G + + L + T I A A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----ATYITELANA 120
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L+Y H +V+HRDIK N+L+ K++DFG + S + GT Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCGTLDYLP 174
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKMMVGTRRAE 415
PE M +EK D++S GVL E + G+ P + Y ++ VE+ T A
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR 234
Query: 416 EVVDPNLEVKPATRALKRSLL 436
+++ L+ P+ R + R +L
Sbjct: 235 DLISRLLKHNPSQRPMLREVL 255
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 95
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 96 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 147
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFGYV 357
+L K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 148 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 259
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 260 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 93
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 94 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 145
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFGYV 357
+L K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 146 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 202
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 257
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 258 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 100
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 101 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 152
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFGYV 357
+L K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 153 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 209
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 264
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 265 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 298
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 96
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 97 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 148
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFGYV 357
+L K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 149 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 205
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 260
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 261 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 294
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 119/269 (44%), Gaps = 26/269 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
+ L D EI LG+G +G VY R I +V K L G E + R
Sbjct: 31 WALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLR 82
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----AT 138
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
I A AL+Y H +V+HRDIK N+L+ K++DFG + S +
Sbjct: 139 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDL 192
Query: 351 MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKM 407
GT Y+ PE M +EK D++S GVL E + G+ P + Y ++ VE+
Sbjct: 193 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 252
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLL 436
T A +++ L+ P+ R + R +L
Sbjct: 253 DFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 116/261 (44%), Gaps = 19/261 (7%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGH 238
A F LG+G +G VY R I +V K L G E + R EVE H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSH 64
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+RH N++RL GY + L+ EY G + + L + T I A A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----ATYITELANA 120
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L+Y H +V+HRDIK N+L+ K++DFG + S + GT Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLP 174
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKMMVGTRRAE 415
PE M +EK D++S GVL E + G+ P + Y ++ VE+ T A
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR 234
Query: 416 EVVDPNLEVKPATRALKRSLL 436
+++ L+ P+ R + R +L
Sbjct: 235 DLISRLLKHNPSQRPMLREVL 255
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 136/287 (47%), Gaps = 48/287 (16%)
Query: 193 VLGEGGYGVVYKGRLINGS----EVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
V+G G +G VY G L++ AVK L + ++G+ +F E + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 95
Query: 247 LLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG----TAKALA 300
LLG C+ EG ++V Y+ +G+L ++ RN+ T +K +IG AK +
Sbjct: 96 LLGICLRSEG-SPLVVLPYMKHGDLRNFI----RNE---THNPTVKDLIGFGLQVAKGMK 147
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFGYV 357
+L K VHRD+ + N ++D++F KV+DFGLA+ + E H T ++
Sbjct: 148 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR---A 414
A E T KSD++SFGVLL E +T P P +VN + ++ RR
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQP 259
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
E DP E V L+C P +E RP S++V + A
Sbjct: 260 EYCPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 140/289 (48%), Gaps = 34/289 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRL-INGSE---VAVKKLLNNLGQAEKE---FRVEVE 234
EI + + E V+G G +G V GRL + G VA+K L +G EK+ F E
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTL--KVGYTEKQRRDFLGEAS 75
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+G H N++ L G + M+V EY+ NG+L+ +L +N G T + ++ G
Sbjct: 76 IMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK---KNDGQFTVIQLVGMLRG 132
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG- 352
+ + YL + VHRD+ + NILI+ KVSDFGL+++L D E+ TTR
Sbjct: 133 ISAGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 189
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGT 411
+ APE SD++S+G+++ E V+ YG RP E+ + +K +
Sbjct: 190 PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS------YGERPYWEMTNQDVIKAVEEG 243
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
R +D PA AL + + L C + RPK ++V ML+
Sbjct: 244 YRLPSPMD-----CPA--ALYQ---LMLDCWQKERNSRPKFDEIVNMLD 282
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIE 253
+G G +G+V+ G +N +VA+K + +E +F E E + + H LV+L G C+E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEG-SMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 254 GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHR 313
LV+E++ +G L +L +G E + + + + +AYL EA V+HR
Sbjct: 94 QAPICLVFEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 314 DIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDI 373
D+ + N L+ + KVSDFG+ + + + +T + +PE + + KSD+
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 374 YSFGVLLLEAVT-GRDPVD 391
+SFGVL+ E + G+ P +
Sbjct: 208 WSFGVLMWEVFSEGKIPYE 226
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 121/269 (44%), Gaps = 26/269 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
+ L D EI LG+G +G VY R I +V K L G E + R
Sbjct: 10 WALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLR 61
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EVE H+RH N++RL GY + L+ EY G + + L + T
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----AT 117
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
I A AL+Y H +V+HRDIK N+L+ K++DFG + + + S TT +
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-L 171
Query: 351 MGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD---YGRPANEVNLVEWLKM 407
GT Y+ PE +EK D++S GVL E + G+ P + Y ++ VE+
Sbjct: 172 CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLL 436
T A +++ L+ P+ R R +L
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIE 253
+G G +G+V+ G +N +VA+K + +E++F E E + + H LV+L G C+E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 254 GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHR 313
LV E++ +G L +L +G E + + + + +AYL EA V+HR
Sbjct: 75 QAPICLVTEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 128
Query: 314 DIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDI 373
D+ + N L+ + KVSDFG+ + + + +T + +PE + + KSD+
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 188
Query: 374 YSFGVLLLEAVT-GRDPVD 391
+SFGVL+ E + G+ P +
Sbjct: 189 WSFGVLMWEVFSEGKIPYE 207
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 130/291 (44%), Gaps = 36/291 (12%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLI----NGSEVAVKKLLNNLGQAEK-EFRVEVEAI 236
EI + E V+G G +G V +GRL S VA+K L + ++ EF E +
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIM 69
Query: 237 GHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
G H N++RL G + M++ E++ NG L+ +L N G T + ++ G A
Sbjct: 70 GQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR---LNDGQFTVIQLVGMLRGIA 126
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHIT-TRVMG--- 352
+ YL E VHRD+ + NIL++ KVSDFGL++ L+ S T T +G
Sbjct: 127 SGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKI 183
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANE--VNLVEWLKMMV 409
+ APE SD +S+G+++ E ++ G P Y +N+ +N +E
Sbjct: 184 PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP--YWDMSNQDVINAIE------ 235
Query: 410 GTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
D L P L+ L C D RP+ QVV L+
Sbjct: 236 --------QDYRLPPPPDCPTSLHQLM--LDCWQKDRNARPRFPQVVSALD 276
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 105/227 (46%), Gaps = 23/227 (10%)
Query: 170 LGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQ 224
LG +TL D +I LG+G +G VY R I +V K L G
Sbjct: 3 LGSKRQWTLEDFDIG-------RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG- 54
Query: 225 AEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLT 284
E + R EVE H+RH N++RL GY + L+ EY G + + L R T
Sbjct: 55 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRT 114
Query: 285 WEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES 344
I A AL+Y H +V+HRDIK N+L+ K++DFG + + + S
Sbjct: 115 ----ATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSS 165
Query: 345 HITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
TT + GT Y+ PE M +EK D++S GVL E + G P +
Sbjct: 166 RRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 137/286 (47%), Gaps = 24/286 (8%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV 239
D EI + + +G G +G VYKG+ V + + Q + F+ EV +
Sbjct: 6 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 65
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RH N++ +GY + +V ++ +L LH + + + + + TA+ +
Sbjct: 66 RHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGM 121
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLD--SGESHITTRVMGTFGYV 357
YLH ++HRD+KS+NI + ++ K+ DFGLA + SG SH ++ G+ ++
Sbjct: 122 DYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWM 177
Query: 358 APE---YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
APE ++ + +SD+Y+FG++L E +TG+ P Y N ++E MVG
Sbjct: 178 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIE----MVG---- 227
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P+L K + KR + C+ ++RP +++ +E
Sbjct: 228 RGSLSPDLS-KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 136/284 (47%), Gaps = 24/284 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI + +G G +G VYKG+ V + K+++ + + FR EV + RH
Sbjct: 32 EIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRH 91
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
N++ +GY + + +V ++ +L + LH + + + TA+ + Y
Sbjct: 92 VNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLH---VQETKFQMFQLIDIARQTAQGMDY 147
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLD--SGESHITTRVMGTFGYVAP 359
LH ++HRD+KS+NI + + K+ DFGLA + SG + + G+ ++AP
Sbjct: 148 LHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV-EQPTGSVLWMAP 203
Query: 360 E---YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEE 416
E + + +SD+YS+G++L E +TG P + +N + + MVG R
Sbjct: 204 EVIRMQDNNPFSFQSDVYSYGIVLYELMTGE------LPYSHINNRDQIIFMVG--RGYA 255
Query: 417 VVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
D + K +A+KR LVA CV E+RP Q++ +E
Sbjct: 256 SPDLSKLYKNCPKAMKR--LVA-DCVKKVKEERPLFPQILSSIE 296
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI- 252
LG G +G V+ G ++VAVK L + F E + ++H+ LVRL
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
E ++ ++ EY+ NG+L +L + LT + + A+ +A++ E +H
Sbjct: 89 EPIY--IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 141
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RD++++NIL+ D + K++DFGLA+L++ E + APE N G KSD
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 373 IYSFGVLLLEAVT-GRDP 389
++SFG+LL E VT GR P
Sbjct: 202 VWSFGILLTEIVTHGRIP 219
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 35/290 (12%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-----EVAVKKLLNNLGQAEKE---FRVEV 233
EI + + + V+G G +G VYKG L S VA+K L G EK+ F E
Sbjct: 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL--KAGYTEKQRVDFLGEA 97
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+G H N++RL G + M++ EY+ NG L+++L G + + ++
Sbjct: 98 GIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR---EKDGEFSVLQLVGMLR 154
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVM 351
G A + YL VHRD+ + NIL++ KVSDFGL+++L D ++ T+
Sbjct: 155 GIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 352 GTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVG 410
+ APE + SD++SFG+++ E +T YG RP E++ E +K +
Sbjct: 212 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT------YGERPYWELSNHEVMKAIND 265
Query: 411 TRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
R +D A+ + + ++C + +RPK + +V +L+
Sbjct: 266 GFRLPTPMD-------CPSAIYQ---LMMQCWQQERARRPKFADIVSILD 305
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI- 252
LG G +G V+ G ++VAVK L + F E + ++H+ LVRL
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
E ++ ++ EY+ NG+L +L + LT + + A+ +A++ E +H
Sbjct: 80 EPIY--IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RD++++NIL+ D + K++DFGLA+L++ E + APE N G KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 373 IYSFGVLLLEAVT-GRDP 389
++SFG+LL E VT GR P
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI- 252
LG G +G V+ G ++VAVK L + F E + ++H+ LVRL
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
E ++ ++ EY+ NG+L +L + LT + + A+ +A++ E +H
Sbjct: 86 EPIY--IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 138
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RD++++NIL+ D + K++DFGLA+L++ E + APE N G KSD
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 373 IYSFGVLLLEAVT-GRDP 389
++SFG+LL E VT GR P
Sbjct: 199 VWSFGILLTEIVTHGRIP 216
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI- 252
LG G +G V+ G ++VAVK L + F E + ++H+ LVRL
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
E ++ ++ EY+ NG+L +L + LT + + A+ +A++ E +H
Sbjct: 82 EPIY--IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 134
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RD++++NIL+ D + K++DFGLA+L++ E + APE N G KSD
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 373 IYSFGVLLLEAVT-GRDP 389
++SFG+LL E VT GR P
Sbjct: 195 VWSFGILLTEIVTHGRIP 212
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 130/291 (44%), Gaps = 36/291 (12%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLI----NGSEVAVKKLLNNLGQAEK-EFRVEVEAI 236
EI + E V+G G +G V +GRL S VA+K L + ++ EF E +
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIM 71
Query: 237 GHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
G H N++RL G + M++ E++ NG L+ +L N G T + ++ G A
Sbjct: 72 GQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR---LNDGQFTVIQLVGMLRGIA 128
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHIT-TRVMG--- 352
+ YL E VHRD+ + NIL++ KVSDFGL++ L+ S T T +G
Sbjct: 129 SGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI 185
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANE--VNLVEWLKMMV 409
+ APE SD +S+G+++ E ++ G P Y +N+ +N +E
Sbjct: 186 PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP--YWDMSNQDVINAIE------ 237
Query: 410 GTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
D L P L+ L C D RP+ QVV L+
Sbjct: 238 --------QDYRLPPPPDCPTSLHQLM--LDCWQKDRNARPRFPQVVSALD 278
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI- 252
LG G +G V+ G ++VAVK L + F E + ++H+ LVRL
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
E ++ ++ EY+ NG+L +L + LT + + A+ +A++ E +H
Sbjct: 88 EPIY--IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 140
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RD++++NIL+ D + K++DFGLA+L++ E + APE N G KSD
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 200
Query: 373 IYSFGVLLLEAVT-GRDP 389
++SFG+LL E VT GR P
Sbjct: 201 VWSFGILLTEIVTHGRIP 218
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI- 252
LG G +G V+ G ++VAVK L + F E + ++H+ LVRL
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
E ++ ++ EY+ NG+L +L + LT + + A+ +A++ E +H
Sbjct: 81 EPIY--IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 133
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RD++++NIL+ D + K++DFGLA+L++ E + APE N G KSD
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 193
Query: 373 IYSFGVLLLEAVT-GRDP 389
++SFG+LL E VT GR P
Sbjct: 194 VWSFGILLTEIVTHGRIP 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI- 252
LG G +G V+ G ++VAVK L + F E + ++H+ LVRL
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
E ++ ++ EY+ NG+L +L + LT + + A+ +A++ E +H
Sbjct: 80 EPIY--IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RD++++NIL+ D + K++DFGLA+L++ E + APE N G KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 373 IYSFGVLLLEAVT-GRDP 389
++SFG+LL E VT GR P
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 24/286 (8%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV 239
D EI + + +G G +G VYKG+ V + + Q + F+ EV +
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RH N++ +GY + +V ++ +L LH + + + + + TA+ +
Sbjct: 78 RHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGM 133
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA--KLLDSGESHITTRVMGTFGYV 357
YLH ++HRD+KS+NI + ++ K+ DFGLA K SG SH ++ G+ ++
Sbjct: 134 DYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWM 189
Query: 358 APE---YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
APE ++ + +SD+Y+FG++L E +TG+ P Y N ++E MVG
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIE----MVG---- 239
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P+L K + KR + C+ ++RP +++ +E
Sbjct: 240 RGSLSPDLS-KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 135/287 (47%), Gaps = 30/287 (10%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRL-INGSE---VAVKKL-LNNLGQAEKEFRVEVEAI 236
EI + E V+G G +G V GRL + G VA+K L + ++F E +
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 84
Query: 237 GHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
G H N++ L G + M++ EY+ NG+L+ +L +N G T + ++ G
Sbjct: 85 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR---KNDGRFTVIQLVGMLRGIG 141
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG-TF 354
+ YL + VHRD+ + NIL++ KVSDFG++++L D E+ TTR
Sbjct: 142 SGMKYLSDM---SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 198
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGTRR 413
+ APE SD++S+G+++ E ++ YG RP +++ + +K + R
Sbjct: 199 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMS------YGERPYWDMSNQDVIKAIEEGYR 252
Query: 414 AEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P ++ A L L C + RPK Q+V ML+
Sbjct: 253 ----LPPPMDCPIALHQL------MLDCWQKERSDRPKFGQIVNMLD 289
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI- 252
LG G +G V+ G ++VAVK L + F E + ++H+ LVRL
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
E ++ ++ EY+ NG+L +L + LT + + A+ +A++ E +H
Sbjct: 85 EPIY--IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 137
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RD++++NIL+ D + K++DFGLA+L++ E + APE N G KSD
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 373 IYSFGVLLLEAVT-GRDP 389
++SFG+LL E VT GR P
Sbjct: 198 VWSFGILLTEIVTHGRIP 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI- 252
LG G +G V+ G ++VAVK L + F E + ++H+ LVRL
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
E ++ ++ EY+ NG+L +L + LT + + A+ +A++ E +H
Sbjct: 86 EPIY--IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 138
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RD++++NIL+ D + K++DFGLA+L++ E + APE N G KSD
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 373 IYSFGVLLLEAVT-GRDP 389
++SFG+LL E VT GR P
Sbjct: 199 VWSFGILLTEIVTHGRIP 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI- 252
LG G +G V+ G ++VAVK L + F E + ++H+ LVRL
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
E ++ ++ EY+ NG+L +L + LT + + A+ +A++ E +H
Sbjct: 90 EPIY--IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 142
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RD++++NIL+ D + K++DFGLA+L++ E + APE N G KSD
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 202
Query: 373 IYSFGVLLLEAVT-GRDP 389
++SFG+LL E VT GR P
Sbjct: 203 VWSFGILLTEIVTHGRIP 220
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI- 252
LG G +G V+ G ++VAVK L + F E + ++H+ LVRL
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
E ++ ++ EY+ NG+L +L + LT + + A+ +A++ E +H
Sbjct: 80 EPIY--IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RD++++NIL+ D + K++DFGLA+L++ E + APE N G KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 373 IYSFGVLLLEAVT-GRDP 389
++SFG+LL E VT GR P
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 24/286 (8%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV 239
D EI + + +G G +G VYKG+ V + + Q + F+ EV +
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RH N++ +GY +V ++ +L LH + + + + + TA+ +
Sbjct: 78 RHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGM 133
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA--KLLDSGESHITTRVMGTFGYV 357
YLH ++HRD+KS+NI + ++ K+ DFGLA K SG SH ++ G+ ++
Sbjct: 134 DYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWM 189
Query: 358 APE---YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
APE ++ + +SD+Y+FG++L E +TG+ P Y N ++E MVG
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIE----MVG---- 239
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P+L K + KR + C+ ++RP +++ +E
Sbjct: 240 RGSLSPDLS-KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 135/287 (47%), Gaps = 30/287 (10%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRL-INGSE---VAVKKL-LNNLGQAEKEFRVEVEAI 236
EI + E V+G G +G V GRL + G VA+K L + ++F E +
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 237 GHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
G H N++ L G + M++ EY+ NG+L+ +L +N G T + ++ G
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR---KNDGRFTVIQLVGMLRGIG 120
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG-TF 354
+ YL + VHRD+ + NIL++ KVSDFG++++L D E+ TTR
Sbjct: 121 SGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 177
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGTRR 413
+ APE SD++S+G+++ E ++ YG RP +++ + +K + R
Sbjct: 178 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMS------YGERPYWDMSNQDVIKAIEEGYR 231
Query: 414 AEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P ++ A L L C + RPK Q+V ML+
Sbjct: 232 ----LPPPMDCPIALHQL------MLDCWQKERSDRPKFGQIVNMLD 268
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 136/304 (44%), Gaps = 41/304 (13%)
Query: 176 FTLRDLEIATNRFSAE---------NVLGEGGYGVVYKGRL-INGSE---VAVKKLLNNL 222
FT D A F+ E V+G G +G V G L + G VA+K L +
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 223 GQAEK-EFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG 281
+ ++ +F E +G H N++ L G + M++ E++ NG+L+ +L +N G
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR---QNDG 130
Query: 282 NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDS 341
T + ++ G A + YL + VHRD+ + NIL++ KVSDFGL++ L+
Sbjct: 131 QFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
Query: 342 GESHIT-TRVMG---TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPA 396
S T T +G + APE SD++S+G+++ E ++ YG RP
Sbjct: 188 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS------YGERPY 241
Query: 397 NEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
++ + + + R + P ++ A L L C D RPK Q+V
Sbjct: 242 WDMTNQDVINAIEQDYR----LPPPMDCPSALHQL------MLDCWQKDRNHRPKFGQIV 291
Query: 457 RMLE 460
L+
Sbjct: 292 NTLD 295
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI- 252
LG G +G V+ G ++VAVK L + F E + ++H+ LVRL
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
E ++ ++ EY+ NG+L +L + LT + + A+ +A++ E +H
Sbjct: 75 EPIY--IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 127
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RD++++NIL+ D + K++DFGLA+L++ E + APE N G KSD
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 373 IYSFGVLLLEAVT-GRDP 389
++SFG+LL E VT GR P
Sbjct: 188 VWSFGILLTEIVTHGRIP 205
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 135/287 (47%), Gaps = 30/287 (10%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRL-INGSE---VAVKKL-LNNLGQAEKEFRVEVEAI 236
EI + E V+G G +G V GRL + G VA+K L + ++F E +
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 237 GHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
G H N++ L G + M++ EY+ NG+L+ +L +N G T + ++ G
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR---KNDGRFTVIQLVGMLRGIG 126
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHITTRVMG-TF 354
+ YL + VHRD+ + NIL++ KVSDFG++++L D E+ TTR
Sbjct: 127 SGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 183
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGTRR 413
+ APE SD++S+G+++ E ++ YG RP +++ + +K + R
Sbjct: 184 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMS------YGERPYWDMSNQDVIKAIEEGYR 237
Query: 414 AEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P ++ A L L C + RPK Q+V ML+
Sbjct: 238 ----LPPPMDCPIALHQL------MLDCWQKERSDRPKFGQIVNMLD 274
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG+G +G V+ G + VA+K L E F E + + +RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRH 72
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
+ LV+L E +V EY++ G+L +L G M L M I A +AY
Sbjct: 73 EKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+ VHRD++++NIL+ + KV+DFGLA+L++ E + APE
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
A G KSD++SFG+LL E T GR P
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI- 252
LG G G V+ G ++VAVK L + F E + ++H+ LVRL
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
E ++ ++ EY+ NG+L +L + LT + + A+ +A++ E +H
Sbjct: 80 EPIY--IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RD++++NIL+ D + K++DFGLA+L++ E + APE N G KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 373 IYSFGVLLLEAVT-GRDP 389
++SFG+LL E VT GR P
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG+G +G V+ G + VA+K L E F E + + +RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
+ LV+L E +V EY++ G+L +L G M L M I A +AY
Sbjct: 73 EKLVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+ VHRD++++NIL+ + KV+DFGLA+L++ E + APE
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEA 186
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
A G KSD++SFG+LL E T GR P
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG+G +G V+ G + VA+K L E F E + + +RH
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 61
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
+ LV+L E +V EY++ G+L +L G M L M I A +AY
Sbjct: 62 EKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 118
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+ VHRD++++NIL+ + KV+DFGLA+L++ E + APE
Sbjct: 119 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 175
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
A G KSD++SFG+LL E T GR P
Sbjct: 176 ALYGRFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG+G +G V+ G + VA+K L E F E + + +RH
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 63
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
+ LV+L E +V EY++ G+L +L G M L M I A +AY
Sbjct: 64 EKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 120
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+ VHRD++++NIL+ + KV+DFGLA+L++ E + APE
Sbjct: 121 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 177
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
A G KSD++SFG+LL E T GR P
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 101/227 (44%), Gaps = 23/227 (10%)
Query: 170 LGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQ 224
LG +TL D +I LG+G +G VY R I +V K L G
Sbjct: 3 LGSKRQWTLEDFDIG-------RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG- 54
Query: 225 AEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLT 284
E + R EVE H+RH N++RL GY + L+ EY G + + L R T
Sbjct: 55 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRT 114
Query: 285 WEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES 344
I A AL+Y H +V+HRDIK N+L+ K++DFG + S
Sbjct: 115 ----ATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR 167
Query: 345 HITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ GT Y+ PE M +EK D++S GVL E + G P +
Sbjct: 168 DT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG+G +G V+ G + VA+K L E F E + + +RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
+ LV+L E +V EY++ G+L +L G M L M I A +AY
Sbjct: 73 EKLVQLYAVVSEE-PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+ VHRD++++NIL+ + KV+DFGLA+L++ E + APE
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
A G KSD++SFG+LL E T GR P
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 17/215 (7%)
Query: 185 TNRFSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEK---EFRVEVEAIGHVR 240
++R+ +LG GG V+ R L + +VAVK L +L + FR E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 241 HKNLVRLL----GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
H +V + G +V EYV+ L +H +G +T + ++VI
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADAC 126
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGES-HITTRVMGTF 354
+AL + H+ ++HRD+K +NILI KV DFG+A+ + DSG S T V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTA 183
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
Y++PE A ++ +SD+YS G +L E +TG P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG+G +G V+ G + VA+K L E F E + + +RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
+ LV+L E +V EY++ G+L +L G M L M I A +AY
Sbjct: 73 EKLVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+ VHRD++++NIL+ + KV+DFGLA+L++ E + APE
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
A G KSD++SFG+LL E T GR P
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG+G +G V+ G + VA+K L E F E + + +RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
+ LV+L E +V EY++ G+L +L G M L M I A +AY
Sbjct: 73 EKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+ VHRD++++NIL+ + KV+DFGLA+L++ E + APE
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
A G KSD++SFG+LL E T GR P
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG+G +G V+ G + VA+K L E F E + + +RH
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 69
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
+ LV+L E +V EY+N G+L +L G L M I A +AY
Sbjct: 70 EKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQI--ASGMAY 126
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+ VHRD++++NIL+ + KV+DFGLA+L++ E + APE
Sbjct: 127 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 183
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
A G KSD++SFG+LL E T GR P
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG+G +G V+ G + VA+K L E F E + + +RH
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 69
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
+ LV+L E +V EY+N G+L +L G L M I A +AY
Sbjct: 70 EKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQI--ASGMAY 126
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+ VHRD++++NIL+ + KV+DFGLA+L++ E + APE
Sbjct: 127 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEA 183
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
A G KSD++SFG+LL E T GR P
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI- 252
LG G +G V+ G ++VAVK L + F E + ++H+ LVRL
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
E ++ ++ EY+ NG+L +L + LT + + A+ +A++ E +H
Sbjct: 76 EPIY--IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 128
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
R+++++NIL+ D + K++DFGLA+L++ E + APE N G KSD
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 373 IYSFGVLLLEAVT-GRDP 389
++SFG+LL E VT GR P
Sbjct: 189 VWSFGILLTEIVTHGRIP 206
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG+G +G V+ G + VA+K L E F E + + +RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
+ LV+L E +V EY++ G L +L G M L M I A +AY
Sbjct: 73 EKLVQLYAVVSEE-PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+ VHRD++++NIL+ + KV+DFGLA+L++ E + APE
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
A G KSD++SFG+LL E T GR P
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 17/215 (7%)
Query: 185 TNRFSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEK---EFRVEVEAIGHVR 240
++R+ +LG GG V+ R L + +VAVK L +L + FR E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 241 HKNLVRLL----GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
H +V + G +V EYV+ L +H +G +T + ++VI
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADAC 126
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHI-TTRVMGTF 354
+AL + H+ ++HRD+K +NI+I KV DFG+A+ + DSG S T V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
Y++PE A ++ +SD+YS G +L E +TG P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 17/215 (7%)
Query: 185 TNRFSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEK---EFRVEVEAIGHVR 240
++R+ +LG GG V+ R L + +VAVK L +L + FR E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 241 HKNLVRLL----GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
H +V + G +V EYV+ L +H +G +T + ++VI
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADAC 126
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHI-TTRVMGTF 354
+AL + H+ ++HRD+K +NI+I KV DFG+A+ + DSG S T V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
Y++PE A ++ +SD+YS G +L E +TG P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG+G +G V+ G + VA+K L E F E + + +RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
+ LV+L E +V EY++ G L +L G M L M I A +AY
Sbjct: 73 EKLVQLYAVVSEE-PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+ VHRD++++NIL+ + KV+DFGLA+L++ E + APE
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
A G KSD++SFG+LL E T GR P
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAE---KEFRVEVEAIG 237
+I R+ + LG GG VY I +VA+K + + E K F EV
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSS 66
Query: 238 HVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMKVIIGT 295
+ H+N+V ++ E LV EY+ L +++ HG + + + T
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINF---------T 117
Query: 296 AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFG 355
+ L + A + ++VHRDIK NILID K+ DFG+AK L T V+GT
Sbjct: 118 NQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ 177
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
Y +PE A +E +DIYS G++L E + G P
Sbjct: 178 YFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 113/232 (48%), Gaps = 14/232 (6%)
Query: 177 TLRDLEIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEA 235
+L E+ + ++ LG G YG VY+G S VAVK L + + E EF E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 60
Query: 236 IGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGT 295
+ ++H NLV+LLG C ++ E++ GNL +L R E V++
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ------EVSAVVLLYM 114
Query: 296 AKALAYLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMG 352
A ++ E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H +
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-- 172
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVE 403
+ APE + KSD+++FGVLL E T G P P+ L+E
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE 224
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG+G +G V+ G + VA+K L E F E + + +RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
+ LV+L E +V EY++ G+L +L G M L M I A +AY
Sbjct: 73 EKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+ VHRD+ ++NIL+ + KV+DFGLA+L++ E + APE
Sbjct: 130 VERM---NYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
A G KSD++SFG+LL E T GR P
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 28/288 (9%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV 239
D EI + + +G G +G VYKG+ V + + Q + F+ EV +
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RH N++ +GY + +V ++ +L LH + + + TA+ +
Sbjct: 67 RHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGM 122
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLD--SGESHITTRVMGTFGYV 357
YLH ++HRD+KS+NI + ++ K+ DFGLA + SG SH ++ G+ ++
Sbjct: 123 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWM 178
Query: 358 APEYANTGMLNE---KSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
APE N +SD+Y+FG++L E +TG+ P + +N + + MVG
Sbjct: 179 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG---- 228
Query: 415 EEVVDPNL-EVKP-ATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P+L +V+ +A+KR + C+ ++RP Q++ +E
Sbjct: 229 RGYLSPDLSKVRSNCPKAMKR---LMAECLKKKRDERPLFPQILASIE 273
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 28/288 (9%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV 239
D EI + + +G G +G VYKG+ V + + Q + F+ EV +
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RH N++ +GY + +V ++ +L LH + + + TA+ +
Sbjct: 67 RHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGM 122
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLD--SGESHITTRVMGTFGYV 357
YLH ++HRD+KS+NI + ++ K+ DFGLA + SG SH ++ G+ ++
Sbjct: 123 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWM 178
Query: 358 APEYANTGMLNE---KSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
APE N +SD+Y+FG++L E +TG+ P + +N + + MVG
Sbjct: 179 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG---- 228
Query: 415 EEVVDPNL-EVKP-ATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P+L +V+ +A+KR + C+ ++RP Q++ +E
Sbjct: 229 RGYLSPDLSKVRSNCPKAMKR---LMAECLKKKRDERPLFPQILASIE 273
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 28/288 (9%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV 239
D EI + + +G G +G VYKG+ V + + Q + F+ EV +
Sbjct: 29 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 88
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RH N++ +GY + +V ++ +L LH + + + TA+ +
Sbjct: 89 RHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGM 144
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLD--SGESHITTRVMGTFGYV 357
YLH ++HRD+KS+NI + ++ K+ DFGLA + SG SH ++ G+ ++
Sbjct: 145 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWM 200
Query: 358 APEYANTGMLNE---KSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
APE N +SD+Y+FG++L E +TG+ P + +N + + MVG
Sbjct: 201 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG---- 250
Query: 415 EEVVDPNL-EVKP-ATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P+L +V+ +A+KR + C+ ++RP Q++ +E
Sbjct: 251 RGYLSPDLSKVRSNCPKAMKR---LMAECLKKKRDERPLFPQILASIE 295
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 28/288 (9%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV 239
D EI + + +G G +G VYKG+ V + + Q + F+ EV +
Sbjct: 4 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 63
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RH N++ +GY + +V ++ +L LH + + + TA+ +
Sbjct: 64 RHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGM 119
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLD--SGESHITTRVMGTFGYV 357
YLH ++HRD+KS+NI + ++ K+ DFGLA + SG SH ++ G+ ++
Sbjct: 120 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWM 175
Query: 358 APEYANTGMLNE---KSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
APE N +SD+Y+FG++L E +TG+ P + +N + + MVG
Sbjct: 176 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG---- 225
Query: 415 EEVVDPNL-EVKP-ATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P+L +V+ +A+KR + C+ ++RP Q++ +E
Sbjct: 226 RGYLSPDLSKVRSNCPKAMKR---LMAECLKKKRDERPLFPQILASIE 270
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 28/288 (9%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV 239
D EI + + +G G +G VYKG+ V + + Q + F+ EV +
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 89
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RH N++ +GY + +V ++ +L LH + + + TA+ +
Sbjct: 90 RHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGM 145
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLD--SGESHITTRVMGTFGYV 357
YLH ++HRD+KS+NI + ++ K+ DFGLA + SG SH ++ G+ ++
Sbjct: 146 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWM 201
Query: 358 APEYANTGMLNE---KSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
APE N +SD+Y+FG++L E +TG+ P + +N + + MVG
Sbjct: 202 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG---- 251
Query: 415 EEVVDPNL-EVKP-ATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P+L +V+ +A+KR + C+ ++RP Q++ +E
Sbjct: 252 RGYLSPDLSKVRSNCPKAMKR---LMAECLKKKRDERPLFPQILASIE 296
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 28/288 (9%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV 239
D EI + + +G G +G VYKG+ V + + Q + F+ EV +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RH N++ +GY + +V ++ +L LH + + + TA+ +
Sbjct: 62 RHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGM 117
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLD--SGESHITTRVMGTFGYV 357
YLH ++HRD+KS+NI + ++ K+ DFGLA + SG SH ++ G+ ++
Sbjct: 118 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWM 173
Query: 358 APEYANTGMLNE---KSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
APE N +SD+Y+FG++L E +TG+ P + +N + + MVG
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG---- 223
Query: 415 EEVVDPNL-EVKP-ATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P+L +V+ +A+KR + C+ ++RP Q++ +E
Sbjct: 224 RGYLSPDLSKVRSNCPKAMKR---LMAECLKKKRDERPLFPQILASIE 268
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 113/232 (48%), Gaps = 14/232 (6%)
Query: 177 TLRDLEIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEA 235
+L E+ + ++ LG G YG VY+G S VAVK L + + E EF E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 60
Query: 236 IGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGT 295
+ ++H NLV+LLG C ++ E++ GNL +L R E V++
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ------EVSAVVLLYM 114
Query: 296 AKALAYLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMG 352
A ++ E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H +
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF-- 172
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVE 403
+ APE + KSD+++FGVLL E T G P P+ L+E
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE 224
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG+G +G V+ G + VA+K L E F E + + +RH
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 62
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
+ LV+L E +V EY++ G+L +L G L M I A +AY
Sbjct: 63 EKLVQLYAVVSEE-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI--ASGMAY 119
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+ VHRD++++NIL+ + KV+DFGLA+L++ E + APE
Sbjct: 120 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEA 176
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
A G KSD++SFG+LL E T GR P
Sbjct: 177 ALYGRFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 137/288 (47%), Gaps = 28/288 (9%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV 239
D EI + + +G G +G VYKG+ V + + Q + F+ EV +
Sbjct: 22 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 81
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RH N++ +GY + +V ++ +L LH + + + TA+ +
Sbjct: 82 RHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGM 137
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA--KLLDSGESHITTRVMGTFGYV 357
YLH ++HRD+KS+NI + ++ K+ DFGLA K SG SH ++ G+ ++
Sbjct: 138 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWM 193
Query: 358 APEYANTGMLNE---KSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
APE N +SD+Y+FG++L E +TG+ P + +N + + MVG
Sbjct: 194 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG---- 243
Query: 415 EEVVDPNL-EVKP-ATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P+L +V+ +A+KR + C+ ++RP Q++ +E
Sbjct: 244 RGYLSPDLSKVRSNCPKAMKR---LMAECLKKKRDERPLFPQILASIE 288
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 28/288 (9%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV 239
D EI + + +G G +G VYKG+ V + + Q + F+ EV +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RH N++ +GY +V ++ +L LH + + + TA+ +
Sbjct: 62 RHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGM 117
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLD--SGESHITTRVMGTFGYV 357
YLH ++HRD+KS+NI + ++ K+ DFGLA + SG SH ++ G+ ++
Sbjct: 118 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWM 173
Query: 358 APEYANTGMLNE---KSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
APE N +SD+Y+FG++L E +TG+ P + +N + + MVG
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG---- 223
Query: 415 EEVVDPNL-EVKP-ATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P+L +V+ +A+KR + C+ ++RP Q++ +E
Sbjct: 224 RGYLSPDLSKVRSNCPKAMKR---LMAECLKKKRDERPLFPQILASIE 268
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 132/276 (47%), Gaps = 39/276 (14%)
Query: 192 NVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLV 245
VLG G +G VYKG + E VA+K L G +A EF E + + H +LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 246 RLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTAKALAYL 302
RLLG C+ + LV + + +G L +++H N G+ L W + AK + YL
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 156
Query: 303 HEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR-VMGTFGYVAPEY 361
E ++VHRD+ + N+L+ + K++DFGLA+LL+ E ++A E
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEV-NLVEWLKMMVGTRRAEEVVD 419
+ +SD++S+GV + E +T G P D G P E+ +L+E + E +
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYD-GIPTREIPDLLE---------KGERLPQ 263
Query: 420 PNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQV 455
P + +V ++C D++ RPK ++
Sbjct: 264 PPI-------CTIDVYMVMVKCWMIDADSRPKFKEL 292
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 137/288 (47%), Gaps = 28/288 (9%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV 239
D EI + + +G G +G VYKG+ V + + Q + F+ EV +
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 89
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RH N++ +GY + +V ++ +L LH + + + TA+ +
Sbjct: 90 RHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGM 145
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA--KLLDSGESHITTRVMGTFGYV 357
YLH ++HRD+KS+NI + ++ K+ DFGLA K SG SH ++ G+ ++
Sbjct: 146 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWM 201
Query: 358 APEYANTGMLNE---KSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
APE N +SD+Y+FG++L E +TG+ P + +N + + MVG
Sbjct: 202 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG---- 251
Query: 415 EEVVDPNL-EVKP-ATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P+L +V+ +A+KR + C+ ++RP Q++ +E
Sbjct: 252 RGYLSPDLSKVRSNCPKAMKR---LMAECLKKKRDERPLFPQILASIE 296
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 32/289 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRL-INGSE---VAVKKLLNNLGQAEK-EFRVEVEAI 236
EI + E V+G G +G V G L + G VA+K L + + ++ +F E +
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 62
Query: 237 GHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
G H N++ L G + M++ E++ NG+L+ +L +N G T + ++ G A
Sbjct: 63 GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR---QNDGQFTVIQLVGMLRGIA 119
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHIT-TRVMG--- 352
+ YL + VHR + + NIL++ KVSDFGL++ L+ S T T +G
Sbjct: 120 AGMKYLADM---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI 176
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGT 411
+ APE SD++S+G+++ E ++ G P + +N +E
Sbjct: 177 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE-------- 228
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ + P ++ A L L C D RPK Q+V L+
Sbjct: 229 --QDYRLPPPMDCPSALHQL------MLDCWQKDRNHRPKFGQIVNTLD 269
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 39/275 (14%)
Query: 193 VLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVR 246
VLG G +G VYKG + E VA+K L G +A EF E + + H +LVR
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTAKALAYLH 303
LLG C+ + LV + + +G L +++H N G+ L W + AK + YL
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLE 134
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR-VMGTFGYVAPEYA 362
E ++VHRD+ + N+L+ + K++DFGLA+LL+ E ++A E
Sbjct: 135 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 363 NTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEV-NLVEWLKMMVGTRRAEEVVDP 420
+ +SD++S+GV + E +T G P D G P E+ +L+E + E + P
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTFGGKPYD-GIPTREIPDLLE---------KGERLPQP 241
Query: 421 NLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQV 455
+ +V ++C D++ RPK ++
Sbjct: 242 PI-------CTIDVYMVMVKCWMIDADSRPKFKEL 269
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 137/288 (47%), Gaps = 28/288 (9%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV 239
D EI + + +G G +G VYKG+ V + + Q + F+ EV +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RH N++ +GY + +V ++ +L LH + + + TA+ +
Sbjct: 62 RHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGM 117
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA--KLLDSGESHITTRVMGTFGYV 357
YLH ++HRD+KS+NI + ++ K+ DFGLA K SG SH ++ G+ ++
Sbjct: 118 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWM 173
Query: 358 APEYANTGMLNE---KSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
APE N +SD+Y+FG++L E +TG+ P + +N + + MVG
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG---- 223
Query: 415 EEVVDPNL-EVKP-ATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ P+L +V+ +A+KR + C+ ++RP Q++ +E
Sbjct: 224 RGYLSPDLSKVRSNCPKAMKR---LMAECLKKKRDERPLFPQILASIE 268
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG+G +G V+ G + VA+K L E F E + + +RH
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 65
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
+ LV+L E +V EY++ G+L +L G L M I A +AY
Sbjct: 66 EKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI--ASGMAY 122
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+ VHRD++++NIL+ + KV+DFGLA+L++ E + APE
Sbjct: 123 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 179
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
A G KSD++SFG+LL E T GR P
Sbjct: 180 ALYGRFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 36/290 (12%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRL-INGSE---VAVKKLLNNLGQAEKE---FRVEVE 234
E+ + E V+G G +G V GRL + G VA+K L +G EK+ F E
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTL--KVGYTEKQRRDFLCEAS 96
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+G H N+V L G G M+V E++ NG L+ +L ++ G T + ++ G
Sbjct: 97 IMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLR---KHDGQFTVIQLVGMLRG 153
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTF 354
A + YL + VHRD+ + NIL++ KVSDFGL+++++ + T G
Sbjct: 154 IAAGMRYLADM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI 210
Query: 355 G--YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG-RPANEVNLVEWLKMMVGT 411
+ APE SD++S+G+++ E ++ YG RP +++ + +K +
Sbjct: 211 PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS------YGERPYWDMSNQDVIKAIEEG 264
Query: 412 RRAEEVVDPNLEVKPATRALKRSL-LVALRCVDPDSEKRPKMSQVVRMLE 460
R PA L + L C + +RPK Q+V +L+
Sbjct: 265 YRL-----------PAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILD 303
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 68
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R + N V++ A ++
Sbjct: 69 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV------VLLYMATQIS 122
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 123 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWT 180
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R + N V++ A ++
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV------VLLYMATQIS 126
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWT 184
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 8/204 (3%)
Query: 193 VLGEGGYGVVYKGRLINGSEVAVKKLLN--NLGQAEKEFRV-EVEAIGHVRHKNLVRLLG 249
+G G YG K R + ++ V K L+ ++ +AEK+ V EV + ++H N+VR
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 250 YCIEGVHRML--VYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIE 307
I+ + L V EY G+L + + + L E ++V+ AL H +
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 308 P--KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTG 365
V+HRD+K +N+ +D + N K+ DFGLA++L+ S T V GT Y++PE N
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRM 191
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDP 389
NEKSDI+S G LL E P
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPP 215
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 113/232 (48%), Gaps = 14/232 (6%)
Query: 177 TLRDLEIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEA 235
+L E+ + ++ LG G +G VY+G S VAVK L + + E EF E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 60
Query: 236 IGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGT 295
+ ++H NLV+LLG C ++ E++ GNL +L R E V++
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ------EVSAVVLLYM 114
Query: 296 AKALAYLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMG 352
A ++ E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H +
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-- 172
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVE 403
+ APE + KSD+++FGVLL E T G P P+ L+E
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE 224
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R + N V++ A ++
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV------VLLYMATQIS 126
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 184
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 17/215 (7%)
Query: 185 TNRFSAENVLGEGGYGVVYKGRLIN-GSEVAVKKLLNNLGQAEK---EFRVEVEAIGHVR 240
++R+ +LG GG V+ R + +VAVK L +L + FR E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 241 HKNLVRLLGY----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
H +V + G +V EYV+ L +H +G +T + ++VI
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADAC 126
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHI-TTRVMGTF 354
+AL + H+ ++HRD+K +NI+I KV DFG+A+ + DSG S T V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
Y++PE A ++ +SD+YS G +L E +TG P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG+G +G V+ G + VA+K L + + F E + + +RH
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-NMSPEAFLQEAQVMKKLRH 239
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
+ LV+L E +V EY++ G+L +L G M L M I A +AY
Sbjct: 240 EKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 296
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+ VHRD++++NIL+ + KV+DFGL +L++ E + APE
Sbjct: 297 VERM---NYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEA 353
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
A G KSD++SFG+LL E T GR P
Sbjct: 354 ALYGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R + N V++ A ++
Sbjct: 73 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV------VLLYMATQIS 126
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 184
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 155 LVTASPLIGLPEISHLGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVA 214
L T P P+ L W EI E LG+G +G V+ G + VA
Sbjct: 160 LTTVCP-TSKPQTQGLAKDAW------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA 212
Query: 215 VKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLH 274
+K L E F E + + +RH+ LV+L E +V EY++ G+L +L
Sbjct: 213 IKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK 270
Query: 275 GAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFG 334
G L M I A +AY+ VHRD++++NIL+ + KV+DFG
Sbjct: 271 GETGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFG 325
Query: 335 LAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
LA+L++ E + APE A G KSD++SFG+LL E T GR P
Sbjct: 326 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 155 LVTASPLIGLPEISHLGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVA 214
L T P P+ L W EI E LG+G +G V+ G + VA
Sbjct: 243 LTTVCP-TSKPQTQGLAKDAW------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA 295
Query: 215 VKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLH 274
+K L E F E + + +RH+ LV+L E +V EY++ G+L +L
Sbjct: 296 IKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLK 353
Query: 275 GAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFG 334
G L M I A +AY+ VHRD++++NIL+ + KV+DFG
Sbjct: 354 GETGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFG 408
Query: 335 LAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
LA+L++ E + APE A G KSD++SFG+LL E T GR P
Sbjct: 409 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 155 LVTASPLIGLPEISHLGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVA 214
L T P P+ L W EI E LG+G +G V+ G + VA
Sbjct: 160 LTTVCP-TSKPQTQGLAKDAW------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA 212
Query: 215 VKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLH 274
+K L E F E + + +RH+ LV+L E +V EY++ G+L +L
Sbjct: 213 IKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK 270
Query: 275 GAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFG 334
G L M I A +AY+ VHRD++++NIL+ + KV+DFG
Sbjct: 271 GETGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFG 325
Query: 335 LAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
LA+L++ E + APE A G KSD++SFG+LL E T GR P
Sbjct: 326 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 17/215 (7%)
Query: 185 TNRFSAENVLGEGGYGVVYKGRLIN-GSEVAVKKLLNNLGQAEK---EFRVEVEAIGHVR 240
++R+ +LG GG V+ R + +VAVK L +L + FR E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 241 HKNLVRLL----GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
H +V + G +V EYV+ L +H +G +T + ++VI
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADAC 126
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHI-TTRVMGTF 354
+AL + H+ ++HRD+K +NI+I KV DFG+A+ + DSG S T V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
Y++PE A ++ +SD+YS G +L E +TG P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R + N V++ A ++
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV------VLLYMATQIS 126
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 184
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R + N V++ A ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV------VLLYMATQIS 121
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 179
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 69
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R + N V++ A ++
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV------VLLYMATQIS 123
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 181
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 69
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R + N V++ A ++
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV------VLLYMATQIS 123
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 181
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 13 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 71
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R + N V++ A ++
Sbjct: 72 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV------VLLYMATQIS 125
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 126 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 183
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 184 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 216
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 21/272 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL-LNNL--GQAEKEFRVEVEAIGHVRHKN 243
F E +G G + VY+ L++G VA+KK+ + +L +A + E++ + + H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+++ IE +V E + G+L + + + + + K + AL ++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYAN 363
+V+HRDIK +N+ I K+ D GL + S ++ ++GT Y++PE +
Sbjct: 154 SR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF-SSKTTAAHSLVGTPYYMSPERIH 209
Query: 364 TGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPNLE 423
N KSDI+S G LL E + P YG +++NL K + E+ P L
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPF-YG---DKMNLYSLCK------KIEQCDYPPLP 259
Query: 424 VKPATRALKRSLLVALRCVDPDSEKRPKMSQV 455
+ L++ LV + C++PD EKRP ++ V
Sbjct: 260 SDHYSEELRQ--LVNM-CINPDPEKRPDVTYV 288
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R + N V++ A ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV------VLLYMATQIS 121
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 179
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 80
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R + N V++ A ++
Sbjct: 81 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV------VLLYMATQIS 134
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 135 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 193 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 225
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 8/204 (3%)
Query: 193 VLGEGGYGVVYKGRLINGSEVAVKKLLN--NLGQAEKEFRV-EVEAIGHVRHKNLVRLLG 249
+G G YG K R + ++ V K L+ ++ +AEK+ V EV + ++H N+VR
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 250 YCIEGVHRML--VYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIE 307
I+ + L V EY G+L + + + L E ++V+ AL H +
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 308 P--KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTG 365
V+HRD+K +N+ +D + N K+ DFGLA++L+ E +GT Y++PE N
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED-FAKEFVGTPYYMSPEQMNRM 191
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDP 389
NEKSDI+S G LL E P
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPP 215
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 155 LVTASPLIGLPEISHLGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVA 214
L T P P+ L W EI E LG+G +G V+ G + VA
Sbjct: 160 LTTVCP-TSKPQTQGLAKDAW------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA 212
Query: 215 VKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLH 274
+K L E F E + + +RH+ LV+L E +V EY++ G+L +L
Sbjct: 213 IKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVGEYMSKGSLLDFLK 270
Query: 275 GAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFG 334
G L M I A +AY+ VHRD++++NIL+ + KV+DFG
Sbjct: 271 GETGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFG 325
Query: 335 LAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
LA+L++ E + APE A G KSD++SFG+LL E T GR P
Sbjct: 326 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 10/211 (4%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 68
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R + N V++ A ++
Sbjct: 69 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV------VLLYMATQIS 122
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAP 359
E +E K +HRD+ + N L+ + KV+DFGL++L+ + AP
Sbjct: 123 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAP 182
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
E + KSD+++FGVLL E T G P
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 10/211 (4%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 69
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R + N V++ A ++
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV------VLLYMATQIS 123
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAP 359
E +E K +HRD+ + N L+ + KV+DFGL++L+ + AP
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAP 183
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
E + KSD+++FGVLL E T G P
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 17/215 (7%)
Query: 185 TNRFSAENVLGEGGYGVVYKGRLIN-GSEVAVKKLLNNLGQAEK---EFRVEVEAIGHVR 240
++R+ +LG GG V+ R + +VAVK L +L + FR E + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 241 HKNLVRLL----GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
H +V + G +V EYV+ L +H +G +T + ++VI
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADAC 143
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL-DSGESHI-TTRVMGTF 354
+AL + H+ ++HRD+K +NI+I KV DFG+A+ + DSG S T V+GT
Sbjct: 144 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 200
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
Y++PE A ++ +SD+YS G +L E +TG P
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 118/231 (51%), Gaps = 20/231 (8%)
Query: 165 PEISHLGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQ 224
P + LG+G W EI + LG G +GVV G+ +VA+K ++
Sbjct: 9 PSTAGLGYGSW------EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSM 61
Query: 225 AEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLT 284
+E EF E + + ++ H+ LV+L G C + ++ EY+ NG L +L MR++
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHR--FQ 118
Query: 285 WEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGE 343
+ +++ +A+ YL + +HRD+ + N L++D+ KVSDFGL++ +LD E
Sbjct: 119 TQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE 175
Query: 344 SHITTRVMGTFG--YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVD 391
T+ V F + PE + KSDI++FGVL+ E + G+ P +
Sbjct: 176 ---TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 103/224 (45%), Gaps = 29/224 (12%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
FT+ D +I LG+G +G VY R I +V K L G E + R
Sbjct: 11 FTIDDFDIV-------RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG-VEHQLR 62
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEAR 288
E+E H+RH N++R+ Y + L+ E+ G L + L HG Q + T+
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
Query: 289 MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITT 348
+ A AL Y HE KV+HRDIK N+L+ + K++DFG + S +
Sbjct: 123 L------ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRR 169
Query: 349 RVM-GTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
R M GT Y+ PE +EK D++ GVL E + G P D
Sbjct: 170 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 103/224 (45%), Gaps = 29/224 (12%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
FT+ D +I LG+G +G VY R I +V K L G E + R
Sbjct: 11 FTIDDFDIG-------RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG-VEHQLR 62
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEAR 288
E+E H+RH N++R+ Y + L+ E+ G L + L HG Q + T+
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
Query: 289 MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITT 348
+ A AL Y HE KV+HRDIK N+L+ + K++DFG + S +
Sbjct: 123 L------ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRR 169
Query: 349 RVM-GTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
R M GT Y+ PE +EK D++ GVL E + G P D
Sbjct: 170 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 137/297 (46%), Gaps = 36/297 (12%)
Query: 181 LEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
+E+ + LG G +GVV G+ +VAVK ++ +E EF E + + +
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVK-MIKEGSMSEDEFFQEAQTMMKLS 61
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMKVIIGTAKA 298
H LV+ G C + +V EY++NG L +L HG L +++ +
Sbjct: 62 HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-----LEMCYDVCEG 116
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGY 356
+A+L + +HRD+ + N L+D + KVSDFG+ + + D S + T+ +
Sbjct: 117 MAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF--PVKW 171
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRAE 415
APE + + KSD+++FG+L+ E + G+ P D + V LK+ G R
Sbjct: 172 SAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV-----LKVSQGHR--- 223
Query: 416 EVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEADDYPFREDRRN 472
+ P+L A+ + + + C EKRP Q++ +E P RE ++
Sbjct: 224 -LYRPHL----ASDTIYQ---IMYSCWHELPEKRPTFQQLLSSIE----PLREKDKH 268
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 103/224 (45%), Gaps = 29/224 (12%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFR 230
FT+ D +I LG+G +G VY R I +V K L G E + R
Sbjct: 12 FTIDDFDIG-------RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG-VEHQLR 63
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEAR 288
E+E H+RH N++R+ Y + L+ E+ G L + L HG Q + T+
Sbjct: 64 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 123
Query: 289 MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITT 348
+ A AL Y HE KV+HRDIK N+L+ + K++DFG + S +
Sbjct: 124 L------ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRR 170
Query: 349 RVM-GTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
R M GT Y+ PE +EK D++ GVL E + G P D
Sbjct: 171 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R E V++ A ++
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ------EVSAVVLLYMATQIS 126
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 184
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R E V++ A ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ------EVSAVVLLYMATQIS 121
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 179
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R E V++ A ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ------EVSAVVLLYMATQIS 121
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 179
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 18/230 (7%)
Query: 165 PEISHLGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQ 224
P + LG+G W EI + LG G +GVV G+ +VA+K ++
Sbjct: 9 PSTAGLGYGSW------EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSM 61
Query: 225 AEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLT 284
+E EF E + + ++ H+ LV+L G C + ++ EY+ NG L +L MR++
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQT- 119
Query: 285 WEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES 344
+ +++ +A+ YL + +HRD+ + N L++D+ KVSDFGL++ + E
Sbjct: 120 -QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE- 174
Query: 345 HITTRVMGTFG--YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVD 391
T+ V F + PE + KSDI++FGVL+ E + G+ P +
Sbjct: 175 -YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 8/204 (3%)
Query: 193 VLGEGGYGVVYKGRLINGSEVAVKKLLN--NLGQAEKEFRV-EVEAIGHVRHKNLVRLLG 249
+G G YG K R + ++ V K L+ ++ +AEK+ V EV + ++H N+VR
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 250 YCIEGVHRML--VYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIE 307
I+ + L V EY G+L + + + L E ++V+ AL H +
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 308 P--KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTG 365
V+HRD+K +N+ +D + N K+ DFGLA++L+ S V GT Y++PE N
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPYYMSPEQMNRM 191
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDP 389
NEKSDI+S G LL E P
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPP 215
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R E V++ A ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ------EVSAVVLLYMATQIS 121
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 179
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R E V++ A ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ------EVSAVVLLYMATQIS 121
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 179
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 139/295 (47%), Gaps = 45/295 (15%)
Query: 190 AENVLGEGGYGVVYKGRLINGSE----VAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
++ V+G+G +GVVY G I+ ++ A+K L + + Q E R + G + H N
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG-LNHPN 83
Query: 244 LVRLLGYCI--EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
++ L+G + EG+ +L+ Y+ +G+L Q++ RN T + + + A+ + Y
Sbjct: 84 VLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNP---TVKDLISFGLQVARGMEY 139
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLD----SGESHITTRVMGTFGY 356
L E K VHRD+ + N ++D+ F KV+DFGLA+ +LD S + H R+ +
Sbjct: 140 LAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--PVKW 194
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEE 416
A E T KSD++SFGVLL E +T P P ++ + + RR
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAP-----PYRHIDPFDLTHFLAQGRRL-- 247
Query: 417 VVDPNLEVKPATRALKRSLLVALRCVDPDSEKRP-------KMSQVVRMLEADDY 464
P E P + V +C + D RP ++ Q+V L D Y
Sbjct: 248 ---PQPEYCPDS-----LYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHY 294
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 107/218 (49%), Gaps = 14/218 (6%)
Query: 177 TLRDLEIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEA 235
++ E+ + ++ LG G YG VY G S VAVK L + + E EF E
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 81
Query: 236 IGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGT 295
+ ++H NLV+LLG C +V EY+ GNL +L R E V++
Sbjct: 82 MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE------EVTAVVLLYM 135
Query: 296 AKALAYLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMG 352
A ++ E +E K +HRD+ + N L+ + KV+DFGL++L+ D+ +H +
Sbjct: 136 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF-- 193
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
+ APE + KSD+++FGVLL E T G P
Sbjct: 194 PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 111/223 (49%), Gaps = 21/223 (9%)
Query: 194 LGEGGYGVVYKGRLINGSE------VAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRL 247
LGEG +G V+ N VAVK L + A K+F E E + +++H+++V+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 248 LGYCIEGVHRMLVYEYVNNGNLEQWL--HG---AMRNQGN----LTWEARMKVIIGTAKA 298
G C+EG ++V+EY+ +G+L ++L HG + +GN LT + + A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH-ITTRVMGTFGYV 357
+ YL VHRD+ + N L+ + K+ DFG+++ + S + + + M ++
Sbjct: 141 MVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEV 399
PE +SD++S GV+L E T G+ P Y NEV
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW-YQLSNNEV 239
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 52/292 (17%)
Query: 193 VLGEGGYGVVYKGRLINGSEVAV-KKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYC 251
VLG+G +G K EV V K+L+ + ++ F EV+ + + H N+++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 252 IEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVV 311
+ + EY+ G L + +M +Q W R+ A +AYLH ++
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIK-SMDSQ--YPWSQRVSFAKDIASGMAYLHSM---NII 130
Query: 312 HRDIKSSNILIDDEFNAKVSDFGLAKL-------------LDSGESHITTRVMGTFGYVA 358
HRD+ S N L+ + N V+DFGLA+L L + V+G ++A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGR---DP------VDYGRPANEVNLVEWLKMMV 409
PE N +EK D++SFG++L E + GR DP +D+G +N+ +L
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCE-IIGRVNADPDYLPRTMDFG-----LNVRGFL---- 240
Query: 410 GTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
+ PN P+ + +RC D D EKRP ++ LE
Sbjct: 241 -----DRYCPPN--CPPSF------FPITVRCCDLDPEKRPSFVKLEHWLET 279
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 18/258 (6%)
Query: 188 FSAENVLGEGGYGVVYKGRLIN-GSEVAVK----KLLNNLGQAEKEFRVEVEAIGHVRHK 242
F N+LG+G + VY+ I+ G EVA+K K + G ++ + EV+ ++H
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQR-VQNEVKIHCQLKHP 71
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYL 302
+++ L Y + + LV E +NG + ++L ++ M II + YL
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII---TGMLYL 128
Query: 303 HEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEY 361
H ++HRD+ SN+L+ N K++DFGLA L E H T + GT Y++PE
Sbjct: 129 HSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEI 183
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVN---LVEWLKMMVGTRRAEEVV 418
A +SD++S G + + GR P D N +N L ++ + A++++
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLI 243
Query: 419 DPNLEVKPATRALKRSLL 436
L PA R S+L
Sbjct: 244 HQLLRRNPADRLSLSSVL 261
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 26/258 (10%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-EVEAIGHVRHKNLVRLLGYC 251
+G+G G VY + G EVA++++ N Q +KE + E+ + ++ N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 252 IEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVV 311
+ G +V EY+ G+L + ++G + R +AL +LH +V+
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSN---QVI 138
Query: 312 HRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKS 371
HRDIKS NIL+ + + K++DFG + +S +T V GT ++APE K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 372 DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRAL 431
DI+S G++ +E + G P P + L + T E+ +P A+
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYL-------IATNGTPELQNPE-----KLSAI 245
Query: 432 KRSLLVALRCVDPDSEKR 449
R L RC+D D EKR
Sbjct: 246 FRDFLN--RCLDMDVEKR 261
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 255 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 313
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R + N V++ A ++
Sbjct: 314 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV------VLLYMATQIS 367
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HR++ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 368 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 425
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 426 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 458
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 213 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 271
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R + N V++ A ++
Sbjct: 272 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV------VLLYMATQIS 325
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HR++ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 326 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 383
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 384 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 416
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 115/222 (51%), Gaps = 17/222 (7%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKGRLI--NGS--EVAVKKL-LNNLGQAE-KEFRV 231
L D+ I N +LGEG +G V +G L +G+ +VAVK + L+N Q E +EF
Sbjct: 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLS 85
Query: 232 EVEAIGHVRHKNLVRLLGYCIE----GVHR-MLVYEYVNNGNLEQWLHGAMRNQG--NLT 284
E + H N++RLLG CIE G+ + M++ ++ G+L +L + G ++
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 285 WEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES 344
+ +K ++ A + YL +HRD+ + N ++ D+ V+DFGL+K + SG+
Sbjct: 146 LQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
Query: 345 HITTRVMGT-FGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ R+ ++A E + KSD+++FGV + E T
Sbjct: 203 YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 18/225 (8%)
Query: 170 LGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEF 229
LG+G W EI + LG G +GVV G+ +VA+K ++ +E EF
Sbjct: 5 LGYGSW------EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEF 57
Query: 230 RVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++ H+ LV+L G C + ++ EY+ NG L +L MR++ + +
Sbjct: 58 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQT--QQLL 114
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR 349
++ +A+ YL + +HRD+ + N L++D+ KVSDFGL++ + E T+
Sbjct: 115 EMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSS 169
Query: 350 VMGTFG--YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVD 391
V F + PE + KSDI++FGVL+ E + G+ P +
Sbjct: 170 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 131/276 (47%), Gaps = 37/276 (13%)
Query: 192 NVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLV 245
VLG G +G VYKG I E VA+K L N +A KE E + V +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 246 RLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
RLLG C+ + LV + + G L L N+G L + + + AK ++YL +
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCL---LDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDV 138
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITT---RVMGTFGYVAPEYA 362
++VHRD+ + N+L+ + K++DFGLA+LLD E+ +V ++A E
Sbjct: 139 ---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV--PIKWMALESI 193
Query: 363 NTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEV-NLVEWLKMMVGTRRAEEVVDP 420
+SD++S+GV + E +T G P D G PA E+ +L+E + E + P
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMTFGAKPYD-GIPAREIPDLLE---------KGERLPQP 243
Query: 421 NLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
+ ++ ++C DSE RP+ ++V
Sbjct: 244 PI-------CTIDVYMIMVKCWMIDSECRPRFRELV 272
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGS-EVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
E+ + ++ LG G YG VY+G S VAVK L + + E EF E + ++
Sbjct: 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 274
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H NLV+LLG C ++ E++ GNL +L R E V++ A ++
Sbjct: 275 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ------EVSAVVLLYMATQIS 328
Query: 301 YLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYV 357
E +E K +HR++ + N L+ + KV+DFGL++L+ D+ +H + +
Sbjct: 329 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWT 386
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
APE + KSD+++FGVLL E T G P
Sbjct: 387 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 419
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIE 253
LG G +G V+ G N ++VAVK L + F E + ++H LVRL
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 254 GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHR 313
++ EY+ G+L +L G + + A+ +AY+ +HR
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKS--DEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHR 134
Query: 314 DIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDI 373
D++++N+L+ + K++DFGLA++++ E + APE N G KSD+
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 374 YSFGVLLLEAVT-GRDP 389
+SFG+LL E VT G+ P
Sbjct: 195 WSFGILLYEIVTYGKIP 211
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 194 LGEGGYGVVYKGRLINGSE------VAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRL 247
LGEG +G V+ N S VAVK L + A K+F+ E E + +++H+++V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 248 LGYCIEGVHRMLVYEYVNNGNLEQWL--HG--AM--------RNQGNLTWEARMKVIIGT 295
G C +G ++V+EY+ +G+L ++L HG AM + +G L + +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 296 AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH-ITTRVMGTF 354
A + YL VHRD+ + N L+ K+ DFG+++ + S + + + M
Sbjct: 143 ASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
++ PE +SD++SFGV+L E T G+ P
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 18/202 (8%)
Query: 192 NVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYC 251
+G+G +G V G G++VAVK + N+ + F E + +RH NLV+LLG
Sbjct: 18 QTIGKGEFGDVMLGD-YRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 252 IE---GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
+E G++ +V EY+ G+L +L R + L + +K + +A+ YL
Sbjct: 75 VEEKGGLY--IVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGN--- 127
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLN 368
VHRD+ + N+L+ ++ AKVSDFGL K ++ + T ++ + APE +
Sbjct: 128 NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREAAFS 183
Query: 369 EKSDIYSFGVLLLEAVT-GRDP 389
KSD++SFG+LL E + GR P
Sbjct: 184 TKSDVWSFGILLWEIYSFGRVP 205
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 26/258 (10%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-EVEAIGHVRHKNLVRLLGYC 251
+G+G G VY + G EVA++++ N Q +KE + E+ + ++ N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 252 IEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVV 311
+ G +V EY+ G+L + ++G + R +AL +LH +V+
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSN---QVI 138
Query: 312 HRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKS 371
HRDIKS NIL+ + + K++DFG + +S + ++GT ++APE K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 372 DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRAL 431
DI+S G++ +E + G P P + L + T E+ +P A+
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYL-------IATNGTPELQNPE-----KLSAI 245
Query: 432 KRSLLVALRCVDPDSEKR 449
R L RC+D D EKR
Sbjct: 246 FRDFLN--RCLDMDVEKR 261
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 98/200 (49%), Gaps = 14/200 (7%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIE 253
LG G +G V+ G ++VA+K L E F E + + ++H LV+L E
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 254 GVHRMLVYEYVNNGNLEQWL---HGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKV 310
+V EY+N G+L +L G NL + + A +AY+
Sbjct: 76 E-PIYIVTEYMNKGSLLDFLKDGEGRALKLPNL-----VDMAAQVAAGMAYIERM---NY 126
Query: 311 VHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEK 370
+HRD++S+NIL+ + K++DFGLA+L++ E + APE A G K
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 371 SDIYSFGVLLLEAVT-GRDP 389
SD++SFG+LL E VT GR P
Sbjct: 187 SDVWSFGILLTELVTKGRVP 206
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 18/202 (8%)
Query: 192 NVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYC 251
+G+G +G V G G++VAVK + N+ + F E + +RH NLV+LLG
Sbjct: 12 QTIGKGEFGDVMLGD-YRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 252 IE---GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
+E G++ +V EY+ G+L +L R + L + +K + +A+ YL
Sbjct: 69 VEEKGGLY--IVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGN--- 121
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLN 368
VHRD+ + N+L+ ++ AKVSDFGL K ++ + T ++ + APE +
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREKKFS 177
Query: 369 EKSDIYSFGVLLLEAVT-GRDP 389
KSD++SFG+LL E + GR P
Sbjct: 178 TKSDVWSFGILLWEIYSFGRVP 199
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 18/202 (8%)
Query: 192 NVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYC 251
+G+G +G V G G++VAVK + N+ + F E + +RH NLV+LLG
Sbjct: 27 QTIGKGEFGDVMLGD-YRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 252 IE---GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
+E G++ +V EY+ G+L +L R + L + +K + +A+ YL
Sbjct: 84 VEEKGGLY--IVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGN--- 136
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLN 368
VHRD+ + N+L+ ++ AKVSDFGL K ++ + T ++ + APE +
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREKKFS 192
Query: 369 EKSDIYSFGVLLLEAVT-GRDP 389
KSD++SFG+LL E + GR P
Sbjct: 193 TKSDVWSFGILLWEIYSFGRVP 214
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 18/202 (8%)
Query: 192 NVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYC 251
+G+G +G V G G++VAVK + N+ + F E + +RH NLV+LLG
Sbjct: 199 QTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 252 IE---GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
+E G++ +V EY+ G+L +L R + L + +K + +A+ YL
Sbjct: 256 VEEKGGLY--IVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGN--- 308
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLN 368
VHRD+ + N+L+ ++ AKVSDFGL K ++ + T ++ + APE +
Sbjct: 309 NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREKKFS 364
Query: 369 EKSDIYSFGVLLLEAVT-GRDP 389
KSD++SFG+LL E + GR P
Sbjct: 365 TKSDVWSFGILLWEIYSFGRVP 386
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 125/266 (46%), Gaps = 26/266 (9%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-EVEAIGHVRHKNLVRLLGYC 251
+G+G G VY + G EVA++++ N Q +KE + E+ + ++ N+V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 252 IEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVV 311
+ G +V EY+ G+L + ++G + R +AL +LH +V+
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSN---QVI 139
Query: 312 HRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKS 371
HR+IKS NIL+ + + K++DFG + +S +T V GT ++APE K
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 372 DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRAL 431
DI+S G++ +E + G P P + L + T E+ +P A+
Sbjct: 199 DIWSLGIMAIEMIEGEPPYLNENPLRALYL-------IATNGTPELQNPE-----KLSAI 246
Query: 432 KRSLLVALRCVDPDSEKRPKMSQVVR 457
R L RC++ D EKR ++++
Sbjct: 247 FRDFLN--RCLEMDVEKRGSAKELIQ 270
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 125/266 (46%), Gaps = 26/266 (9%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-EVEAIGHVRHKNLVRLLGYC 251
+G+G G VY + G EVA++++ N Q +KE + E+ + ++ N+V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 252 IEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVV 311
+ G +V EY+ G+L + ++G + R +AL +LH +V+
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSN---QVI 139
Query: 312 HRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKS 371
HRDIKS NIL+ + + K++DFG + +S + ++GT ++APE K
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 372 DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRAL 431
DI+S G++ +E + G P P + L + T E+ +P A+
Sbjct: 199 DIWSLGIMAIEMIEGEPPYLNENPLRALYL-------IATNGTPELQNPE-----KLSAI 246
Query: 432 KRSLLVALRCVDPDSEKRPKMSQVVR 457
R L RC++ D EKR ++++
Sbjct: 247 FRDFLN--RCLEMDVEKRGSAKELIQ 270
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 194 LGEGGYGVVYKGRLIN------GSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRL 247
LGEG +G V+ N VAVK L A ++F+ E E + ++H+++VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 248 LGYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRN---------QGNLTWEARMKVIIGTA 296
G C EG ++V+EY+ +G+L ++L HG G L + V A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH-ITTRVMGTFG 355
+ YL VHRD+ + N L+ K+ DFG+++ + S + + + R M
Sbjct: 146 AGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
++ PE +SD++SFGV+L E T G+ P
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 194 LGEGGYGVVYKGRLIN------GSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRL 247
LGEG +G V+ N VAVK L A ++F+ E E + ++H+++VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 248 LGYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRN---------QGNLTWEARMKVIIGTA 296
G C EG ++V+EY+ +G+L ++L HG G L + V A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH-ITTRVMGTFG 355
+ YL VHRD+ + N L+ K+ DFG+++ + S + + + R M
Sbjct: 140 AGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
++ PE +SD++SFGV+L E T G+ P
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 101/223 (45%), Gaps = 27/223 (12%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVY-----KGRLINGSEVAVKKLLNNLGQAEKEFR 230
FT+ D EI LG+G +G VY K I +V K + G E + R
Sbjct: 20 FTIDDFEIG-------RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEG-VEHQLR 71
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTW-EARM 289
E+E H+ H N++RL Y + L+ EY G L + L Q + T+ E R
Sbjct: 72 REIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL------QKSCTFDEQRT 125
Query: 290 KVIIGT-AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITT 348
I+ A AL Y H KV+HRDIK N+L+ + K++DFG + S
Sbjct: 126 ATIMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSV---HAPSLRRK 179
Query: 349 RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ GT Y+ PE M NEK D++ GVL E + G P +
Sbjct: 180 TMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 14/207 (6%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIE 253
LG G +GVV G+ +VA+K ++ +E EF E + + ++ H+ LV+L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 254 GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHR 313
++ EY+ NG L +L MR++ + +++ +A+ YL + +HR
Sbjct: 75 QRPIFIITEYMANGCLLNYLR-EMRHRFQT--QQLLEMCKDVCEAMEYLESK---QFLHR 128
Query: 314 DIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFG--YVAPEYANTGMLNEKS 371
D+ + N L++D+ KVSDFGL++ + E T+ V F + PE + KS
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 372 DIYSFGVLLLEAVT-GRDPVDYGRPAN 397
DI++FGVL+ E + G+ P Y R N
Sbjct: 187 DIWAFGVLMWEIYSLGKMP--YERFTN 211
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIA 128
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 236
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 237 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 131
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 188
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 239
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 240 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 128
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 236
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 237 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 14/207 (6%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIE 253
LG G +GVV G+ +VA+K ++ +E EF E + + ++ H+ LV+L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 254 GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHR 313
++ EY+ NG L +L MR++ + +++ +A+ YL + +HR
Sbjct: 71 QRPIFIITEYMANGCLLNYLR-EMRHRFQT--QQLLEMCKDVCEAMEYLESK---QFLHR 124
Query: 314 DIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFG--YVAPEYANTGMLNEKS 371
D+ + N L++D+ KVSDFGL++ + E T+ V F + PE + KS
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 372 DIYSFGVLLLEAVT-GRDPVDYGRPAN 397
DI++FGVL+ E + G+ P Y R N
Sbjct: 183 DIWAFGVLMWEIYSLGKMP--YERFTN 207
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 235
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 236 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 26/258 (10%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-EVEAIGHVRHKNLVRLLGYC 251
+G+G G VY + G EVA++++ N Q +KE + E+ + ++ N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 252 IEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVV 311
+ G +V EY+ G+L + ++G + R +AL +LH +V+
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSN---QVI 138
Query: 312 HRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKS 371
HRDIKS NIL+ + + K++DFG + +S + ++GT ++APE K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 372 DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRAL 431
DI+S G++ +E + G P P + L + T E+ +P A+
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYL-------IATNGTPELQNPE-----KLSAI 245
Query: 432 KRSLLVALRCVDPDSEKR 449
R L RC++ D EKR
Sbjct: 246 FRDFLN--RCLEMDVEKR 261
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 121
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 122 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 229
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 230 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 264
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 237
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 238 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 238
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 239 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 194 LGEGGYGVVYKGRLIN------GSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRL 247
LGEG +G V+ N VAVK L A ++F+ E E + ++H+++VR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 248 LGYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRN---------QGNLTWEARMKVIIGTA 296
G C EG ++V+EY+ +G+L ++L HG G L + V A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH-ITTRVMGTFG 355
+ YL VHRD+ + N L+ K+ DFG+++ + S + + + R M
Sbjct: 169 AGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
++ PE +SD++SFGV+L E T G+ P
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 133
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 134 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 241
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 242 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 276
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 235
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 236 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 237
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 238 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 238
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 239 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 100 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 152
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 153 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 260
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 261 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 295
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 127/285 (44%), Gaps = 34/285 (11%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G+ VAVK+L ++ +++F+ E++ + + +V+
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 249 GYCIEGVHRM---LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
G G R LV EY+ +G L +L R++ L + K + YL
Sbjct: 79 GVSY-GPGRQSLRLVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR 134
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYAN 363
+ VHRD+ + NIL++ E + K++DFGLAKLL + + R G + APE +
Sbjct: 135 ---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 191
Query: 364 TGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVV----- 418
+ + +SD++SFGV+L E T D + E+L+MM R +
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFTYCD-------KSCSPSAEFLRMMGCERDVPALCRLLEL 244
Query: 419 ---DPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
L PA A L+ C P + RP S + L+
Sbjct: 245 LEEGQRLPAPPACPAEVHELMKL--CWAPSPQDRPSFSALGPQLD 287
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 235
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 236 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 14/207 (6%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIE 253
LG G +GVV G+ +VA+K ++ +E EF E + + ++ H+ LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 254 GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHR 313
++ EY+ NG L +L MR++ + +++ +A+ YL + +HR
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHRFQT--QQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 314 DIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFG--YVAPEYANTGMLNEKS 371
D+ + N L++D+ KVSDFGL++ + E T+ V F + PE + KS
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 372 DIYSFGVLLLEAVT-GRDPVDYGRPAN 397
DI++FGVL+ E + G+ P Y R N
Sbjct: 188 DIWAFGVLMWEIYSLGKMP--YERFTN 212
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 242
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 243 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 127/285 (44%), Gaps = 34/285 (11%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G+ VAVK+L ++ +++F+ E++ + + +V+
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 249 GYCIEGVHRM---LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
G G R LV EY+ +G L +L R++ L + K + YL
Sbjct: 78 GVSY-GPGRQSLRLVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR 133
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYAN 363
+ VHRD+ + NIL++ E + K++DFGLAKLL + + R G + APE +
Sbjct: 134 ---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 190
Query: 364 TGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV------ 417
+ + +SD++SFGV+L E T D + E+L+MM R +
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFTYCD-------KSCSPSAEFLRMMGSERDVPALSRLLEL 243
Query: 418 --VDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
L PA A L+ C P + RP S + L+
Sbjct: 244 LEEGQRLPAPPACPAEVHELMKL--CWAPSPQDRPSFSALGPQLD 286
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 238
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 239 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 7/197 (3%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIE 253
LG G +G V+ G N ++VAVK L + + F E + ++H LVRL +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 254 GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHR 313
++ E++ G+L +L G + + A+ +AY+ +HR
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKS--DEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHR 133
Query: 314 DIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDI 373
D++++N+L+ + K++DFGLA++++ E + APE N G KS++
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 374 YSFGVLLLEAVT-GRDP 389
+SFG+LL E VT G+ P
Sbjct: 194 WSFGILLYEIVTYGKIP 210
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 10/205 (4%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIE 253
LG G +GVV G+ +VA+K ++ +E EF E + + ++ H+ LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 254 GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHR 313
++ EY+ NG L +L MR++ + +++ +A+ YL + +HR
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHRFQT--QQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 314 DIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDI 373
D+ + N L++D+ KVSDFGL++ + E + + PE + KSDI
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 374 YSFGVLLLEAVT-GRDPVDYGRPAN 397
++FGVL+ E + G+ P Y R N
Sbjct: 190 WAFGVLMWEIYSLGKMP--YERFTN 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 104/206 (50%), Gaps = 18/206 (8%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAE-KEFRVEVEAIGHVRHKNLVRL 247
LGEG +G V R G +VAVK L G + + E+E + ++ H+N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 248 LGYCIE--GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
G C E G L+ E++ +G+L+++L +N+ + + ++K + K + YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLP---KNKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITT---RVMGTFGYVAPEYA 362
+ VHRD+ + N+L++ E K+ DFGL K +++ + T R F Y APE
Sbjct: 146 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 201
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRD 388
SD++SFGV L E +T D
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLTYCD 227
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 235
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + +++ ++ D++ RPK +++
Sbjct: 236 ERLPQPPICTIDVYMIMRKCWMI-------DADSRPKFRELI 270
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 130/280 (46%), Gaps = 37/280 (13%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHVRH 241
F VLG G +G VYKG I E VA+K+L +A KE E + V +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTAKA 298
++ RLLG C+ + L+ + + G L ++ N G+ L W + AK
Sbjct: 87 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 139
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E ++
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRAEE 416
A E + +SD++S+GV + E +T G P D G PA+E++ + + E
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKGER 247
Query: 417 VVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
+ P + +++ ++ D++ RPK +++
Sbjct: 248 LPQPPICTIDVYMIMRKCWMI-------DADSRPKFRELI 280
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 238
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + +++ ++ D++ RPK +++
Sbjct: 239 ERLPQPPICTIDVYMIMRKCWMI-------DADSRPKFRELI 273
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 126/284 (44%), Gaps = 44/284 (15%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
F VLG+G +G V K R ++ A+KK+ + + EV + + H+ +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 247 LLGYCIE---------GVHR----MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+E V + + EY NG L +H NQ + + I+
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK---------LLDS--- 341
+AL+Y+H ++HRD+K NI ID+ N K+ DFGLAK LDS
Sbjct: 127 ---EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 342 -GESHITTRVMGTFGYVAPEYAN-TGMLNEKSDIYSFGVLLLEAV----TGRDPVDYGRP 395
G S T +GT YVA E + TG NEK D+YS G++ E + TG + V+ +
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKK 240
Query: 396 ANEVNL-----VEWLKMMVGTRRAEEVVDPNLEVKPATRALKRS 434
V++ + KM V + ++D + +P R L S
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 127/285 (44%), Gaps = 34/285 (11%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G+ VAVK+L ++ +++F+ E++ + + +V+
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 249 GYCIEGVHRM---LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
G G R LV EY+ +G L +L R++ L + K + YL
Sbjct: 91 GVSY-GPGRQSLRLVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR 146
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYAN 363
+ VHRD+ + NIL++ E + K++DFGLAKLL + + R G + APE +
Sbjct: 147 ---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 203
Query: 364 TGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV------ 417
+ + +SD++SFGV+L E T D + E+L+MM R +
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFTYCD-------KSCSPSAEFLRMMGCERDVPALSRLLEL 256
Query: 418 --VDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
L PA A L+ C P + RP S + L+
Sbjct: 257 LEEGQRLPAPPACPAEVHELMKL--CWAPSPQDRPSFSALGPQLD 299
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 104/206 (50%), Gaps = 18/206 (8%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAE-KEFRVEVEAIGHVRHKNLVRL 247
LGEG +G V R G +VAVK L G + + E+E + ++ H+N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 248 LGYCIE--GVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
G C E G L+ E++ +G+L+++L +N+ + + ++K + K + YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLP---KNKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITT---RVMGTFGYVAPEYA 362
+ VHRD+ + N+L++ E K+ DFGL K +++ + T R F Y APE
Sbjct: 134 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 189
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRD 388
SD++SFGV L E +T D
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLTYCD 215
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 135/300 (45%), Gaps = 49/300 (16%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGS---EVAVKKLLNNLGQAE-KEFRVEVEAI---GH 238
N ++V+GEG +G V K R+ + A+K++ + + ++F E+E + GH
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG------------AMRNQGNLTWE 286
H N++ LLG C + L EY +GNL +L A L+ +
Sbjct: 75 --HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 287 ARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI 346
+ A+ + YL + + +HRD+ + NIL+ + + AK++DFGL++ G+
Sbjct: 133 QLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR----GQEVY 185
Query: 347 TTRVMGTFG--YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEW 404
+ MG ++A E N + SD++S+GVLL E V+ G P + E
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG-----GTPYCGMTCAEL 240
Query: 405 LKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV----RMLE 460
+ + R E+ ++ + EV R +C +RP +Q++ RMLE
Sbjct: 241 YEKLPQGYRLEKPLNCDDEVYDLMR----------QCWREKPYERPSFAQILVSLNRMLE 290
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ EY+ G+L +L +++ + ++ K + YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 133
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + NIL+++E K+ DFGL K+L + + G + APE
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE 191
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 194 LGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQAEKE-FRVEVEAIGHVRHKNLVRLLGYC 251
LG GG+G V + G +VA+K+ L +E + +E++ + + H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA-REV 81
Query: 252 IEGVHRM-------LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHE 304
+G+ ++ L EY G+L ++L+ N L ++ + AL YLHE
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLN-QFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 305 AIEPKVVHRDIKSSNILID---DEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+++HRD+K NI++ K+ D G AK LD GE + T +GT Y+APE
Sbjct: 141 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPEL 195
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
D +SFG L E +TG P
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 135/300 (45%), Gaps = 49/300 (16%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGS---EVAVKKLLNNLGQAE-KEFRVEVEAI---GH 238
N ++V+GEG +G V K R+ + A+K++ + + ++F E+E + GH
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG------------AMRNQGNLTWE 286
H N++ LLG C + L EY +GNL +L A L+ +
Sbjct: 85 --HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 287 ARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI 346
+ A+ + YL + + +HRD+ + NIL+ + + AK++DFGL++ G+
Sbjct: 143 QLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR----GQEVY 195
Query: 347 TTRVMGTFG--YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEW 404
+ MG ++A E N + SD++S+GVLL E V+ G P + E
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG-----GTPYCGMTCAEL 250
Query: 405 LKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV----RMLE 460
+ + R E+ ++ + EV R +C +RP +Q++ RMLE
Sbjct: 251 YEKLPQGYRLEKPLNCDDEVYDLMR----------QCWREKPYERPSFAQILVSLNRMLE 300
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 194 LGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQAEKE-FRVEVEAIGHVRHKNLVRLLGYC 251
LG GG+G V + G +VA+K+ L +E + +E++ + + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA-REV 80
Query: 252 IEGVHRM-------LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHE 304
+G+ ++ L EY G+L ++L+ N L ++ + AL YLHE
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLN-QFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 305 AIEPKVVHRDIKSSNILID---DEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
+++HRD+K NI++ K+ D G AK LD GE + T +GT Y+APE
Sbjct: 140 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPEL 194
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
D +SFG L E +TG P
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 125/284 (44%), Gaps = 32/284 (11%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G+ VAVK+L ++ +++F+ E++ + + +V+
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 249 G--YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G Y LV EY+ +G L +L R++ L + K + YL
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR- 130
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ VHRD+ + NIL++ E + K++DFGLAKLL + R G + APE +
Sbjct: 131 --RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSD 188
Query: 365 GMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVV------ 418
+ + +SD++SFGV+L E T D + E+L+MM R +
Sbjct: 189 NIFSRQSDVWSFGVVLYELFTYCD-------KSCSPSAEFLRMMGCERDVPALCRLLELL 241
Query: 419 --DPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
L PA A L+ C P + RP S + L+
Sbjct: 242 EEGQRLPAPPACPAEVHELMKL--CWAPSPQDRPSFSALGPQLD 283
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 124
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
+ + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 125 EGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 232
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 233 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 267
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ EY+ G+L +L +++ + ++ K + YL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 137
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + NIL+++E K+ DFGL K+L + + G + APE
Sbjct: 138 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 196 SKFSVASDVWSFGVVLYELFT 216
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVV-YKGRLINGSEVAVKKL-LNNLGQAEKEFRVEVEAI 236
+D + + +G GG+ V ++ G VA+K + N LG + E+EA+
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 237 GHVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGT 295
++RH+++ +L + +E +++ +V EY G L ++ +Q L+ E V
Sbjct: 63 KNLRHQHICQLY-HVLETANKIFMVLEYCPGGELFDYI----ISQDRLSEEETRVVFRQI 117
Query: 296 AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGL-AKLLDSGESHITTRVMGTF 354
A+AY+H HRD+K N+L D+ K+ DFGL AK + + H+ T G+
Sbjct: 118 VSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSL 173
Query: 355 GYVAPEYAN-TGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRR 413
Y APE L ++D++S G+LL + G P D ++ + + K+M G
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD-----DDNVMALYKKIMRGKYD 228
Query: 414 AEEVVDPN--------LEVKPATRALKRSLL 436
+ + P+ L+V P R ++LL
Sbjct: 229 VPKWLSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ EY+ G+L +L +++ + ++ K + YL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 132
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + NIL+++E K+ DFGL K+L + + G + APE
Sbjct: 133 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 191 SKFSVASDVWSFGVVLYELFT 211
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ EY+ G+L +L ++ ++ K + YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL---LQYTSQICKGMEYLGTK- 136
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + NIL+++E K+ DFGL K+L + + G + APE
Sbjct: 137 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 45/320 (14%)
Query: 188 FSAENVLGEGGYGVVYK------GRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
F LGEG YG VYK G+++ +V V+ L +E E+ +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL-------QEIIKEISIMQQCDS 83
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
++V+ G + +V EY G++ + +RN+ LT + ++ T K L Y
Sbjct: 84 PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR--LRNK-TLTEDEIATILQSTLKGLEY 140
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
LH + +HRDIK+ NIL++ E +AK++DFG+A L + V+GT ++APE
Sbjct: 141 LHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEV 196
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPN 421
N +DI+S G+ +E G+ P P + M+ T P
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI-------FMIPTNPPPTFRKPE 249
Query: 422 LEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEADDYPFREDRRNRKSRTTSME 481
L T +K +C+ E+R +Q+++ +PF R ++ S+
Sbjct: 250 LWSDNFTDFVK-------QCLVKSPEQRATATQLLQ------HPFV-----RSAKGVSIL 291
Query: 482 IESLKESTEIESKVEDSEGR 501
+ + E+ +++ K ++S+ R
Sbjct: 292 RDLINEAMDVKLKRQESQQR 311
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ EY+ G+L +L +++ + ++ K + YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 136
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + NIL+++E K+ DFGL K+L + + G + APE
Sbjct: 137 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ EY+ G+L +L +++ + ++ K + YL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 131
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + NIL+++E K+ DFGL K+L + + G + APE
Sbjct: 132 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 190 SKFSVASDVWSFGVVLYELFT 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ EY+ G+L +L +++ + ++ K + YL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 138
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + NIL+++E K+ DFGL K+L + + G + APE
Sbjct: 139 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 197 SKFSVASDVWSFGVVLYELFT 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ EY+ G+L +L +++ + ++ K + YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 133
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + NIL+++E K+ DFGL K+L + + G + APE
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ EY+ G+L +L +++ + ++ K + YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 133
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + NIL+++E K+ DFGL K+L + + G + APE
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ EY+ G+L +L +++ + ++ K + YL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 139
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + NIL+++E K+ DFGL K+L + + G + APE
Sbjct: 140 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 198 SKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ EY+ G+L +L +++ + ++ K + YL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 164
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + NIL+++E K+ DFGL K+L + + G + APE
Sbjct: 165 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 223 SKFSVASDVWSFGVVLYELFT 243
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VL G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 242
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 243 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ EY+ G+L +L +++ + ++ K + YL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 140
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + NIL+++E K+ DFGL K+L + + G + APE
Sbjct: 141 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 199 SKFSVASDVWSFGVVLYELFT 219
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 37/280 (13%)
Query: 188 FSAENVLGEGGYGVVYKGRLI-NGSEVAVKKLLNNL-----GQAEKEFRVEVEAIGHVRH 241
F VLG G +G VYKG I G +V + + L +A KE E + V +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTAKA 298
++ RLLG C+ + L+ + + G L ++ N G+ L W + AK
Sbjct: 111 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 163
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E ++
Sbjct: 164 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRAEE 416
A E + +SD++S+GV + E +T G P D G PA+E++ + + E
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKGER 271
Query: 417 VVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
+ P + ++ ++C D++ RPK +++
Sbjct: 272 LPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 304
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VL G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 235
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 236 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VLG G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 131
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFG AKLL + E
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 239
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 240 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 129/280 (46%), Gaps = 37/280 (13%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHVRH 241
F VLG G +G VYKG I E VA+K+L +A KE E + V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTAKA 298
++ RLLG C+ + L+ + + G L ++ N G+ L W + AK
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFG AKLL + E ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRAEE 416
A E + +SD++S+GV + E +T G P D G PA+E++ + + E
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKGER 239
Query: 417 VVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
+ P + ++ ++C D++ RPK +++
Sbjct: 240 LPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ EY+ G+L +L +++ + ++ K + YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 151
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + NIL+++E K+ DFGL K+L + + G + APE
Sbjct: 152 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 37/282 (13%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHV 239
F VL G +G VYKG I E VA+K+L +A KE E + V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTA 296
+ ++ RLLG C+ + L+ + + G L ++ N G+ L W + A
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FG 355
K + YL + ++VHRD+ + N+L+ + K++DFGLAKLL + E
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
++A E + +SD++S+GV + E +T G P D G PA+E++ + +
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 242
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E + P + ++ ++C D++ RPK +++
Sbjct: 243 ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ E++ G+L ++L +++ + ++ K + YL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 136
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + NIL+++E K+ DFGL K+L + + G + APE
Sbjct: 137 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ EY+ G+L +L +++ + ++ K + YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 151
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + NIL+++E K+ DFGL K+L + + G + APE
Sbjct: 152 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 129/280 (46%), Gaps = 37/280 (13%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHVRH 241
F VLG G +G VYKG I E VA+K+L +A KE E + V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTAKA 298
++ RLLG C+ + L+ + + G L ++ N G+ L W + AK
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFG AKLL + E ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRAEE 416
A E + +SD++S+GV + E +T G P D G PA+E++ + + E
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKGER 237
Query: 417 VVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
+ P + ++ ++C D++ RPK +++
Sbjct: 238 LPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 129/280 (46%), Gaps = 37/280 (13%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHVRH 241
F VLG G +G VYKG I E VA+K+L +A KE E + V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTAKA 298
++ RLLG C+ + L+ + + G L ++ N G+ L W + AK
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFG AKLL + E ++
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRAEE 416
A E + +SD++S+GV + E +T G P D G PA+E++ + + E
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKGER 244
Query: 417 VVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
+ P + ++ ++C D++ RPK +++
Sbjct: 245 LPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 194 LGEGGYGVVYKGRLI-----NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+G +G V R G VAVKKL ++ + ++F E+E + ++H N+V+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
G C R L+ EY+ G+L +L +++ + ++ K + YL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 134
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HR++ + NIL+++E K+ DFGL K+L + + + G + APE
Sbjct: 135 --RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE 192
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
+ SD++SFGV+L E T
Sbjct: 193 SKFSVASDVWSFGVVLYELFT 213
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 10/210 (4%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG G +G V+ ++VAVK + E F E + ++H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQH 69
Query: 242 KNLVRLLGYCI-EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L E ++ ++ E++ G+L +L ++ L + A+ +A
Sbjct: 70 DKLVKLHAVVTKEPIY--IITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMA 125
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
++ + +HRD++++NIL+ K++DFGLA++++ E + APE
Sbjct: 126 FIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 182
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
N G KSD++SFG+LL+E VT GR P
Sbjct: 183 AINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 29/230 (12%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSE------VAVKKLLNNL-GQAEKEFR 230
L+++ ++ RF E LGE +G VYKG L + VA+K L + G +EFR
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRN----------- 279
E ++H N+V LLG + +++ Y ++G+L ++L MR+
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL--VMRSPHSDVGSTDDD 135
Query: 280 ---QGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA 336
+ L + ++ A + YL VVH+D+ + N+L+ D+ N K+SD GL
Sbjct: 136 RTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLF 192
Query: 337 KLLDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + + + + + + ++APE G + SDI+S+GV+L E +
Sbjct: 193 REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 37/280 (13%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHVRH 241
F VLG G +G VYKG I E VA+K+L +A KE E + V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTAKA 298
++ RLLG C+ + L+ + + G L ++ N G+ L W + AK
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFG AKLL + E ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRAEE 416
A E + +SD++S+GV + E +T G P D G PA+E++ + + E
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKGER 239
Query: 417 VVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
+ P + +++ ++ D++ RPK +++
Sbjct: 240 LPQPPICTIDVYMIMRKCWMI-------DADSRPKFRELI 272
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 17/224 (7%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR---LING---SEVAVKKLLNNLGQAEK-E 228
F + E++ + + LG+G +G+VY+G +I G + VAVK + + E+ E
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 63
Query: 229 FRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG----AMRNQGNL- 283
F E + ++VRLLG +G ++V E + +G+L+ +L A N G
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 123
Query: 284 -TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDS 341
T + +++ A +AYL+ K VHRD+ + N ++ +F K+ DFG+ + + ++
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 180
Query: 342 GESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + ++APE G+ SD++SFGV+L E +
Sbjct: 181 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 17/224 (7%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR---LING---SEVAVKKLLNNLGQAEK-E 228
F + E++ + + LG+G +G+VY+G +I G + VAVK + + E+ E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 229 FRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG----AMRNQGNL- 283
F E + ++VRLLG +G ++V E + +G+L+ +L A N G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 284 -TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDS 341
T + +++ A +AYL+ K VHRD+ + N ++ +F K+ DFG+ + + ++
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
Query: 342 GESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + ++APE G+ SD++SFGV+L E +
Sbjct: 184 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 29/230 (12%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSE------VAVKKLLNNL-GQAEKEFR 230
L+++ ++ RF E LGE +G VYKG L + VA+K L + G +EFR
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRN----------- 279
E ++H N+V LLG + +++ Y ++G+L ++L MR+
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL--VMRSPHSDVGSTDDD 118
Query: 280 ---QGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA 336
+ L + ++ A + YL VVH+D+ + N+L+ D+ N K+SD GL
Sbjct: 119 RTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLF 175
Query: 337 KLLDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + + + + + + ++APE G + SDI+S+GV+L E +
Sbjct: 176 REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 134/300 (44%), Gaps = 39/300 (13%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAI-GHVRHKNLVR 246
F ++G G YG VYKGR + ++A K+++ G E+E + E+ + + H+N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 247 LLGYCIE----GVHRM--LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
G I+ G+ LV E+ G++ + N W A + I + L+
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREI--LRGLS 143
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
+LH+ KV+HRDIK N+L+ + K+ DFG++ LD T +GT ++APE
Sbjct: 144 HLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT-FIGTPYWMAPE 199
Query: 361 YANT-----GMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAE 415
+ KSD++S G+ +E G P+ P + L+
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI------------P 247
Query: 416 EVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEADDYPFREDRRNRKS 475
P L+ K ++ + S + + C+ + +RP Q+++ +PF D+ N +
Sbjct: 248 RNPAPRLKSKKWSKKFQ-SFIES--CLVKNHSQRPATEQLMK------HPFIRDQPNERQ 298
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 37/280 (13%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHVRH 241
F VLG G +G VYKG I E VA+K+L +A KE E + V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGN---LTWEARMKVIIGTAKA 298
++ RLLG C+ + L+ + + G L ++ N G+ L W + AK
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFG AKLL + E ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRAEE 416
A E + +SD++S+GV + E +T G P D G PA+E++ + + E
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKGER 239
Query: 417 VVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
+ P + +++ ++ D++ RPK +++
Sbjct: 240 LPQPPICTIDVYMIMRKCWMI-------DADSRPKFRELI 272
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 135/300 (45%), Gaps = 49/300 (16%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGS---EVAVKKLLNNLGQAE-KEFRVEVEAI---GH 238
N ++V+GEG +G V K R+ + A+K++ + + ++F E+E + GH
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG------------AMRNQGNLTWE 286
H N++ LLG C + L EY +GNL +L A L+ +
Sbjct: 82 --HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 287 ARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI 346
+ A+ + YL + + +HR++ + NIL+ + + AK++DFGL++ G+
Sbjct: 140 QLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR----GQEVY 192
Query: 347 TTRVMGTFG--YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEW 404
+ MG ++A E N + SD++S+GVLL E V+ G P + E
Sbjct: 193 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG-----GTPYCGMTCAEL 247
Query: 405 LKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV----RMLE 460
+ + R E+ ++ + EV R +C +RP +Q++ RMLE
Sbjct: 248 YEKLPQGYRLEKPLNCDDEVYDLMR----------QCWREKPYERPSFAQILVSLNRMLE 297
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 30/293 (10%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGRLINGS----EVAVKKLLNNLGQAEKE-FRVEVEAIG 237
IA +LGEG +G VY+G N VAVK + KE F E +
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 238 HVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
++ H ++V+L+G IE ++ E G L +L RN+ +L + + K
Sbjct: 69 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLE---RNKNSLKVLTLVLYSLQICK 124
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
A+AYL E+I VHRDI NIL+ K+ DFGL++ ++ + + + ++
Sbjct: 125 AMAYL-ESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 181
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRAEE 416
+PE N SD++ F V + E ++ G+ P + + + ++E + +
Sbjct: 182 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE---------KGDR 232
Query: 417 VVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEADDYPFRED 469
+ P+L P L RC D D RP+ +++V L +D Y +D
Sbjct: 233 LPKPDL-CPPVLYTL------MTRCWDYDPSDRPRFTELVCSL-SDVYQMEKD 277
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 30/293 (10%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGRLINGS----EVAVKKLLNNLGQAEKE-FRVEVEAIG 237
IA +LGEG +G VY+G N VAVK + KE F E +
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 238 HVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
++ H ++V+L+G IE ++ E G L +L RN+ +L + + K
Sbjct: 81 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLE---RNKNSLKVLTLVLYSLQICK 136
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
A+AYL E+I VHRDI NIL+ K+ DFGL++ ++ + + + ++
Sbjct: 137 AMAYL-ESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 193
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRAEE 416
+PE N SD++ F V + E ++ G+ P + + + ++E + +
Sbjct: 194 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE---------KGDR 244
Query: 417 VVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEADDYPFRED 469
+ P+L P L RC D D RP+ +++V L +D Y +D
Sbjct: 245 LPKPDL-CPPVLYTL------MTRCWDYDPSDRPRFTELVCSL-SDVYQMEKD 289
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 36/226 (15%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVEVE 234
++L+D +I LG G +G V+ R NG A+K L +KE V ++
Sbjct: 3 YSLQDFQIL-------RTLGTGSFGRVHLIRSRHNGRYYAMKVL-------KKEIVVRLK 48
Query: 235 AIGH----------VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLT 284
+ H V H ++R+ G + ++ +Y+ G L L + R +
Sbjct: 49 QVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA 108
Query: 285 WEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES 344
+V + AL YLH +++RD+K NIL+D + K++DFG AK +
Sbjct: 109 KFYAAEVCL----ALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV----P 157
Query: 345 HITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
+T + GT Y+APE +T N+ D +SFG+L+ E + G P
Sbjct: 158 DVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 30/293 (10%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGRLINGS----EVAVKKLLNNLGQAEKE-FRVEVEAIG 237
IA +LGEG +G VY+G N VAVK + KE F E +
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 238 HVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
++ H ++V+L+G IE ++ E G L +L RN+ +L + + K
Sbjct: 65 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLE---RNKNSLKVLTLVLYSLQICK 120
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
A+AYL E+I VHRDI NIL+ K+ DFGL++ ++ + + + ++
Sbjct: 121 AMAYL-ESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 177
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLKMMVGTRRAEE 416
+PE N SD++ F V + E ++ G+ P + + + ++E + +
Sbjct: 178 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE---------KGDR 228
Query: 417 VVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEADDYPFRED 469
+ P+L P L RC D D RP+ +++V L +D Y +D
Sbjct: 229 LPKPDL-CPPVLYTL------MTRCWDYDPSDRPRFTELVCSL-SDVYQMEKD 273
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 10/210 (4%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG G +G V+ ++VAVK + E F E + ++H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQH 242
Query: 242 KNLVRLLGYCI-EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L E ++ ++ E++ G+L +L ++ L I A+ +A
Sbjct: 243 DKLVKLHAVVTKEPIY--IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMA 298
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
++ + +HRD++++NIL+ K++DFGLA++++ E + APE
Sbjct: 299 FIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 355
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
N G KSD++SFG+LL+E VT GR P
Sbjct: 356 AINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 17/224 (7%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR---LING---SEVAVKKLLNNLGQAEK-E 228
F + E++ + + LG+G +G+VY+G +I G + VAVK + + E+ E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 229 FRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG----AMRNQGNL- 283
F E + ++VRLLG +G ++V E + +G+L+ +L A N G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 284 -TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDS 341
T + +++ A +AYL+ K VHRD+ + N ++ +F K+ DFG+ + + ++
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 342 GESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + ++APE G+ SD++SFGV+L E +
Sbjct: 184 AYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 24/216 (11%)
Query: 186 NRFSAENVLGEGGYGVVYKG--RLINGS-EVAVKKLLNNLGQAE-KEFRVEVEAIGHVRH 241
N A+ LG G +G V +G R+ +VA+K L +A+ +E E + + + +
Sbjct: 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 69
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG-----AMRNQGNLTWEARMKVIIGTA 296
+VRL+G C + MLV E G L ++L G + N L + M
Sbjct: 70 PYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM------- 121
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTF-- 354
+ YL E VHRD+ + N+L+ + AK+SDFGL+K L + +S+ T R G +
Sbjct: 122 -GMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 177
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
+ APE N + +SD++S+GV + EA++ G+ P
Sbjct: 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 125/284 (44%), Gaps = 44/284 (15%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
F VLG+G +G V K R ++ A+KK+ + + EV + + H+ +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 247 LLGYCIE---------GVHR----MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+E V + + EY N L +H NQ + + I+
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK---------LLDS--- 341
+AL+Y+H ++HRD+K NI ID+ N K+ DFGLAK LDS
Sbjct: 127 ---EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 342 -GESHITTRVMGTFGYVAPEYAN-TGMLNEKSDIYSFGVLLLEAV----TGRDPVDYGRP 395
G S T +GT YVA E + TG NEK D+YS G++ E + TG + V+ +
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKK 240
Query: 396 ANEVNL-----VEWLKMMVGTRRAEEVVDPNLEVKPATRALKRS 434
V++ + KM V + ++D + +P R L S
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLING-------SEVAVKKLLNNLGQAEK-EFRVEV 233
E+A + + LG+G +G+VY+G + G + VA+K + E+ EF E
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG---AMRNQGNLTWEARMK 290
+ ++VRLLG +G +++ E + G+L+ +L AM N L + K
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 291 VIIGT---AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHI 346
+I A +AYL+ K VHRD+ + N ++ ++F K+ DFG+ + + ++
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 347 TTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + +++PE G+ SD++SFGV+L E T
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGR---LING---SEVAVKKLLNNLGQAEK-EFRVEVE 234
E++ + + LG+G +G+VY+G +I G + VAVK + + E+ EF E
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG----AMRNQGNL--TWEAR 288
+ ++VRLLG +G ++V E + +G+L+ +L A N G T +
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 289 MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHIT 347
+++ A +AYL+ K VHRD+ + N ++ +F K+ DFG+ + + ++
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 189
Query: 348 TRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + ++APE G+ SD++SFGV+L E +
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 104/221 (47%), Gaps = 21/221 (9%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKGR-LINGSEVAVK---KLLNNLGQAEKEFRVEV 233
+ DL I R +G+G + V R ++ G EVAVK K N +K FR EV
Sbjct: 1 MADLHIGNYRLL--KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EV 57
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMKV 291
+ + H N+V+L LV EY + G + +L HG M+ + EAR K
Sbjct: 58 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEK-----EARAK- 111
Query: 292 IIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVM 351
A+ Y H+ +VHRD+K+ N+L+D + N K++DFG + G T
Sbjct: 112 FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FC 166
Query: 352 GTFGYVAPE-YANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
G+ Y APE + + D++S GV+L V+G P D
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 17/224 (7%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGR---LING---SEVAVKKLLNNLGQAEK-E 228
F + E++ + + LG+G +G+VY+G +I G + VAVK + + E+ E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 229 FRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG----AMRNQGNL- 283
F E + ++VRLLG +G ++V E + +G+L+ +L A N G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 284 -TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDS 341
T + +++ A +AYL+ K VHRD+ + N ++ +F K+ DFG+ + + ++
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 342 GESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + ++APE G+ SD++SFGV+L E +
Sbjct: 184 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLING-------SEVAVKKLLNNLGQAEK-EFRVEV 233
E+A + + LG+G +G+VY+G + G + VA+K + E+ EF E
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 69
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG---AMRNQGNLTWEARMK 290
+ ++VRLLG +G +++ E + G+L+ +L AM N L + K
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 291 VIIGT---AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHI 346
+I A +AYL+ K VHRD+ + N ++ ++F K+ DFG+ + + ++
Sbjct: 130 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 186
Query: 347 TTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + +++PE G+ SD++SFGV+L E T
Sbjct: 187 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 136/304 (44%), Gaps = 45/304 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVY--------KGRLINGSEVAVKKLLNNLGQAE-KEFRVE 232
E ++ + LGEG +G V K + VAVK L ++ + + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLR-ARRPPGMEYSYDINRV 149
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+T++ + A+ + YL K +HRD+ + N+L+ + K++DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPAN 397
+++ + + TT ++APE + +SD++SFGVL+ E T G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-----GSPYP 261
Query: 398 EVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALR-CVDPDSEKRPKMSQVV 456
+ + E K++ R + KPA L + +R C +RP Q+V
Sbjct: 262 GIPVEELFKLLKEGHRMD---------KPAN--CTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 457 RMLE 460
L+
Sbjct: 311 EDLD 314
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 21/201 (10%)
Query: 194 LGEGGYGVVYKGRL-INGSEVAVKKLLNNLGQAEK-EFRVEVEAIGHVRHKNLVRLLGYC 251
+G G +G V+ GRL + + VAVK L K +F E + H N+VRL+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 252 IEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKV-----IIGTAKA-LAYLHEA 305
+ +V E V G+ +L R +G AR++V ++G A A + YL
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL----RTEG-----ARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FGYVAPEYANT 364
+HRD+ + N L+ ++ K+SDFG+++ G + + + APE N
Sbjct: 233 C---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNY 289
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
G + +SD++SFG+LL E +
Sbjct: 290 GRYSSESDVWSFGILLWETFS 310
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 35/245 (14%)
Query: 193 VLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLVRLLGYC 251
V+G G +GVV++ +L+ EVA+KK+L +K F+ E++ + V+H N+V L +
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVDLKAFF 101
Query: 252 I------EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVI----IGTAKALAY 301
+ V LV EYV + ++ A R+ L M +I ++LAY
Sbjct: 102 YSNGDKKDEVFLNLVLEYV-----PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
+H + HRDIK N+L+D K+ DFG AK+L +GE +++ + + Y APE
Sbjct: 157 IHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX--ICSRYYRAPE 211
Query: 361 YANTGMLNEKS--DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV- 417
G N + DI+S G ++ E + G+ P+ G + LVE +K++ GT E++
Sbjct: 212 LI-FGATNYTTNIDIWSTGCVMAELMQGQ-PLFPGESGID-QLVEIIKVL-GTPSREQIK 267
Query: 418 -VDPN 421
++PN
Sbjct: 268 TMNPN 272
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL-------LNNLGQAEKEFRV 231
D + + + LG G +G V G + G +VAVK L L+ +G+ ++E
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE--- 61
Query: 232 EVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEARM 289
++ + RH ++++L +V EYV+ G L ++ HG + EAR
Sbjct: 62 -IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM-----EAR- 114
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR 349
++ A+ Y H + VVHRD+K N+L+D NAK++DFGL+ ++ GE T+
Sbjct: 115 RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS- 170
Query: 350 VMGTFGYVAPEYANTGML-NEKSDIYSFGVLLLEAVTGRDPVD 391
G+ Y APE + + + DI+S GV+L + G P D
Sbjct: 171 -CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLING-------SEVAVKKLLNNLGQAEK-EFRVEV 233
E+A + + LG+G +G+VY+G + G + VA+K + E+ EF E
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 64
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG---AMRNQGNLTWEARMK 290
+ ++VRLLG +G +++ E + G+L+ +L M N L + K
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 291 VIIGT---AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHI 346
+I A +AYL+ K VHRD+ + N ++ ++F K+ DFG+ + + ++
Sbjct: 125 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 181
Query: 347 TTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + +++PE G+ SD++SFGV+L E T
Sbjct: 182 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 193 VLGEGGYGVVYKGR-LINGSEVAVK---KLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
+G+G + V R ++ G EVAVK K N +K FR EV + + H N+V+L
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
LV EY + G + +L HG M+ + EAR K A+ Y H+
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----EARAK-FRQIVSAVQYCHQKF 133
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTG 365
+VHRD+K+ N+L+D + N K++DFG + G T G+ Y APE +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKK 188
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ D++S GV+L V+G P D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 193 VLGEGGYGVVYKGR-LINGSEVAVK---KLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
+G+G + V R ++ G EVAVK K N +K FR EV + + H N+V+L
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
LV EY + G + +L HG M+ + EAR K A+ Y H+
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----EARAK-FRQIVSAVQYCHQKF 133
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTG 365
+VHRD+K+ N+L+D + N K++DFG + G T G+ Y APE +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKK 188
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ D++S GV+L V+G P D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 109/216 (50%), Gaps = 24/216 (11%)
Query: 186 NRFSAENVLGEGGYGVVYKG--RLINGS-EVAVKKLLNNLGQAE-KEFRVEVEAIGHVRH 241
N A+ LG G +G V +G R+ +VA+K L +A+ +E E + + + +
Sbjct: 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 395
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG-----AMRNQGNLTWEARMKVIIGTA 296
+VRL+G C + MLV E G L ++L G + N L + M
Sbjct: 396 PYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM------- 447
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFG- 355
+ YL E VHR++ + N+L+ + AK+SDFGL+K L + +S+ T R G +
Sbjct: 448 -GMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 503
Query: 356 -YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
+ APE N + +SD++S+GV + EA++ G+ P
Sbjct: 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVK---KLLNNLGQAEKEFRVEVEAIGHVRHKN 243
+ + +G+G + V R ++ G EVAVK K N +K FR EV + + H N
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPN 75
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMKVIIGTAKALAY 301
+V+L LV EY + G + +L HG M+ + EAR K A+ Y
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----EARAK-FRQIVSAVQY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE- 360
H+ +VHRD+K+ N+L+D + N K++DFG + G T G+ Y APE
Sbjct: 130 CHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--FCGSPPYAAPEL 184
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ + D++S GV+L V+G P D
Sbjct: 185 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 136/304 (44%), Gaps = 45/304 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVY--------KGRLINGSEVAVKKLLNNLGQAE-KEFRVE 232
E ++ + LGEG +G V K + VAVK L ++ + + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLR-ARRPPGMEYSYDINRV 149
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+T++ + A+ + YL K +HRD+ + N+L+ + K++DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPAN 397
+++ + + TT ++APE + +SD++SFGVL+ E T G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-----GSPYP 261
Query: 398 EVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALR-CVDPDSEKRPKMSQVV 456
+ + E K++ R + KPA L + +R C +RP Q+V
Sbjct: 262 GIPVEELFKLLKEGHRMD---------KPAN--CTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 457 RMLE 460
L+
Sbjct: 311 EDLD 314
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 136/304 (44%), Gaps = 45/304 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVY--------KGRLINGSEVAVKKLLNNLGQAE-KEFRVE 232
E ++ + LGEG +G V K + VAVK L ++ + + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR-ARRPPGMEYSYDINRV 149
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+T++ + A+ + YL K +HRD+ + N+L+ + K++DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 339 LDSGESHI-TTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPAN 397
+++ + + TT ++APE + +SD++SFGVL+ E T G P
Sbjct: 207 INNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-----GSPYP 261
Query: 398 EVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALR-CVDPDSEKRPKMSQVV 456
+ + E K++ R + KPA L + +R C +RP Q+V
Sbjct: 262 GIPVEELFKLLKEGHRMD---------KPAN--CTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 457 RMLE 460
L+
Sbjct: 311 EDLD 314
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 194 LGEGGYGVVYKGRLINGS----EVAVKKLLNN-LGQAEK--EFRVEVEAIGHVRHKNLVR 246
LG+G +GVV +G S VAVK L + L Q E +F EV A+ + H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L G + +M V E G+L L ++QG+ + + A+ + YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK- 130
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + N+L+ K+ DFGL + L + H + F + APE T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 365 GMLNEKSDIYSFGVLLLEAVT-GRDP 389
+ SD + FGV L E T G++P
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 136/304 (44%), Gaps = 45/304 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVY--------KGRLINGSEVAVKKLLNNLGQAE-KEFRVE 232
E ++ + LGEG +G V K + VAVK L ++ + + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSE 90
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR-ARRPPGMEYSYDINRV 149
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+T++ + A+ + YL K +HRD+ + N+L+ + K++DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPAN 397
+++ + + TT ++APE + +SD++SFGVL+ E T G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-----GSPYP 261
Query: 398 EVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALR-CVDPDSEKRPKMSQVV 456
+ + E K++ R + KPA L + +R C +RP Q+V
Sbjct: 262 GIPVEELFKLLKEGHRMD---------KPAN--CTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 457 RMLE 460
L+
Sbjct: 311 EDLD 314
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 194 LGEGGYGVVYKGRLINGS----EVAVKKLLNN-LGQAEK--EFRVEVEAIGHVRHKNLVR 246
LG+G +GVV +G S VAVK L + L Q E +F EV A+ + H+NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L G + +M V E G+L L ++QG+ + + A+ + YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK- 134
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + N+L+ K+ DFGL + L + H + F + APE T
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 365 GMLNEKSDIYSFGVLLLEAVT-GRDP 389
+ SD + FGV L E T G++P
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 19/225 (8%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGRLING-------SEVAVKKLLNNLGQAEK- 227
F + E+A + + LG+G +G+VY+G + G + VA+K + E+
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 228 EFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG---AMRNQGNLT 284
EF E + ++VRLLG +G +++ E + G+L+ +L M N L
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 285 WEARMKVIIGT---AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLD 340
+ K+I A +AYL+ K VHRD+ + N ++ ++F K+ DFG+ + + +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 341 SGESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + + +++PE G+ SD++SFGV+L E T
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 21/223 (9%)
Query: 192 NVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLV 245
VLG G +G V+KG I E V +K + + G Q+ + + AIG + H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 246 RLLGYCIEGVHRMLVYEYVNNGNLEQWLH---GAMRNQGNLTWEARMKVIIGTAKALAYL 302
RLLG C G LV +Y+ G+L + GA+ Q L W ++ AK + YL
Sbjct: 97 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 149
Query: 303 HEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHIT-TRVMGTFGYVAPEY 361
E +VHR++ + N+L+ +V+DFG+A LL + + + ++A E
Sbjct: 150 EEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 206
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVE 403
+ G +SD++S+GV + E +T G +P R A +L+E
Sbjct: 207 IHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 249
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 21/201 (10%)
Query: 194 LGEGGYGVVYKGRL-INGSEVAVKKLLNNLGQAEK-EFRVEVEAIGHVRHKNLVRLLGYC 251
+G G +G V+ GRL + + VAVK L K +F E + H N+VRL+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 252 IEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKV-----IIGTAKA-LAYLHEA 305
+ +V E V G+ +L R +G AR++V ++G A A + YL
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL----RTEG-----ARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT-FGYVAPEYANT 364
+HRD+ + N L+ ++ K+SDFG+++ G + + + APE N
Sbjct: 233 C---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNY 289
Query: 365 GMLNEKSDIYSFGVLLLEAVT 385
G + +SD++SFG+LL E +
Sbjct: 290 GRYSSESDVWSFGILLWETFS 310
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLING-------SEVAVKKLLNNLGQAEK-EFRVEV 233
E+A + + LG+G +G+VY+G + G + VA+K + E+ EF E
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 73
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG---AMRNQGNLTWEARMK 290
+ ++VRLLG +G +++ E + G+L+ +L M N L + K
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 291 VIIGT---AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHI 346
+I A +AYL+ K VHRD+ + N ++ ++F K+ DFG+ + + ++
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 190
Query: 347 TTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + +++PE G+ SD++SFGV+L E T
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 38/247 (15%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLIN--------GSEVAVKKLLNNLGQAE-KEFRVE 232
E+ +R LGEG +G V I ++VAVK L ++ + + + E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ-ARRPPGLEFSFNPSHN 142
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
L+ + + A+ + YL K +HRD+ + N+L+ ++ K++DFGLA+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 339 LDSGESHITTRVMGTFG-----YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDY 392
+ HI T G ++APE + +SD++SFGVLL E T G P
Sbjct: 200 I----HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP- 254
Query: 393 GRPANEV 399
G P E+
Sbjct: 255 GVPVEEL 261
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 28/228 (12%)
Query: 182 EIATNRFSAENVLGEGGYGVVY--------KGRLINGSEVAVKKLLNNLGQAE-KEFRVE 232
E ++ + LGEG +G V K + VAVK L ++ + + + E
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR-ARRPPGMEYSYDINRV 195
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+T++ + A+ + YL K +HRD+ + N+L+ + K++DFGLA+
Sbjct: 196 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 252
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+++ + + TT ++APE + +SD++SFGVL+ E T
Sbjct: 253 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 194 LGEGGYGVVYKGRLINGS----EVAVKKLLNN-LGQAEK--EFRVEVEAIGHVRHKNLVR 246
LG+G +GVV +G S VAVK L + L Q E +F EV A+ + H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L G + +M V E G+L L ++QG+ + + A+ + YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK- 130
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + N+L+ K+ DFGL + L + H + F + APE T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 365 GMLNEKSDIYSFGVLLLEAVT-GRDP 389
+ SD + FGV L E T G++P
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 136/304 (44%), Gaps = 45/304 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVY--------KGRLINGSEVAVKKLLNNLGQAE-KEFRVE 232
E ++ + LGEG +G V K + VAVK L ++ + + + E
Sbjct: 18 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 77
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 78 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR-ARRPPGMEYSYDINRV 136
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+T++ + A+ + YL K +HRD+ + N+L+ + K++DFGLA+
Sbjct: 137 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARD 193
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPAN 397
+++ + + TT ++APE + +SD++SFGVL+ E T G P
Sbjct: 194 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-----GSPYP 248
Query: 398 EVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALR-CVDPDSEKRPKMSQVV 456
+ + E K++ R + KPA L + +R C +RP Q+V
Sbjct: 249 GIPVEELFKLLKEGHRMD---------KPAN--CTNELYMMMRDCWHAVPSQRPTFKQLV 297
Query: 457 RMLE 460
L+
Sbjct: 298 EDLD 301
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 21/223 (9%)
Query: 192 NVLGEGGYGVVYKGRLINGSE-----VAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLV 245
VLG G +G V+KG I E V +K + + G Q+ + + AIG + H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 246 RLLGYCIEGVHRMLVYEYVNNGNLEQWLH---GAMRNQGNLTWEARMKVIIGTAKALAYL 302
RLLG C G LV +Y+ G+L + GA+ Q L W ++ AK + YL
Sbjct: 79 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 131
Query: 303 HEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHIT-TRVMGTFGYVAPEY 361
E +VHR++ + N+L+ +V+DFG+A LL + + + ++A E
Sbjct: 132 EEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 188
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVE 403
+ G +SD++S+GV + E +T G +P R A +L+E
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 231
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 194 LGEGGYGVVYKGRLINGS----EVAVKKLLNN-LGQAEK--EFRVEVEAIGHVRHKNLVR 246
LG+G +GVV +G S VAVK L + L Q E +F EV A+ + H+NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L G + +M V E G+L L ++QG+ + + A+ + YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK- 140
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + N+L+ K+ DFGL + L + H + F + APE T
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 365 GMLNEKSDIYSFGVLLLEAVT-GRDP 389
+ SD + FGV L E T G++P
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 134/304 (44%), Gaps = 45/304 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVY--------KGRLINGSEVAVKKLLNNLGQAE-KEFRVE 232
E ++ + LGEG +G V K + VAVK L ++ + + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR-ARRPPGMEXSYDINRV 149
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+T++ + A+ + YL K +HRD+ + N+L+ + K++DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 339 LDS-GESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPAN 397
+++ TT ++APE + +SD++SFGVL+ E T G P
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-----GSPYP 261
Query: 398 EVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALR-CVDPDSEKRPKMSQVV 456
+ + E K++ R + KPA L + +R C +RP Q+V
Sbjct: 262 GIPVEELFKLLKEGHRMD---------KPAN--CTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 457 RMLE 460
L+
Sbjct: 311 EDLD 314
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 194 LGEGGYGVVYKGRLINGS----EVAVKKLLNN-LGQAEK--EFRVEVEAIGHVRHKNLVR 246
LG+G +GVV +G S VAVK L + L Q E +F EV A+ + H+NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L G + +M V E G+L L ++QG+ + + A+ + YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK- 140
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + N+L+ K+ DFGL + L + H + F + APE T
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 365 GMLNEKSDIYSFGVLLLEAVT-GRDP 389
+ SD + FGV L E T G++P
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 194 LGEGGYGVVYKGRLINGS----EVAVKKLLNN-LGQAEK--EFRVEVEAIGHVRHKNLVR 246
LG+G +GVV +G S VAVK L + L Q E +F EV A+ + H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L G + +M V E G+L L ++QG+ + + A+ + YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK- 130
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + N+L+ K+ DFGL + L + H + F + APE T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 365 GMLNEKSDIYSFGVLLLEAVT-GRDP 389
+ SD + FGV L E T G++P
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 136/304 (44%), Gaps = 45/304 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVY--------KGRLINGSEVAVKKLLNNLGQAE-KEFRVE 232
E ++ + LGEG +G V K + VAVK L ++ + + + E
Sbjct: 20 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 79
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR-ARRPPGMEYSYDINRV 138
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+T++ + A+ + YL K +HRD+ + N+L+ + K++DFGLA+
Sbjct: 139 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 195
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPAN 397
+++ + + TT ++APE + +SD++SFGVL+ E T G P
Sbjct: 196 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-----GSPYP 250
Query: 398 EVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALR-CVDPDSEKRPKMSQVV 456
+ + E K++ R + KPA L + +R C +RP Q+V
Sbjct: 251 GIPVEELFKLLKEGHRMD---------KPAN--CTNELYMMMRDCWHAVPSQRPTFKQLV 299
Query: 457 RMLE 460
L+
Sbjct: 300 EDLD 303
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 136/304 (44%), Gaps = 45/304 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVY--------KGRLINGSEVAVKKLLNNLGQAE-KEFRVE 232
E ++ + LGEG +G V K + VAVK L ++ + + + E
Sbjct: 23 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 82
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR-ARRPPGMEYSYDINRV 141
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+T++ + A+ + YL K +HRD+ + N+L+ + K++DFGLA+
Sbjct: 142 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 198
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPAN 397
+++ + + TT ++APE + +SD++SFGVL+ E T G P
Sbjct: 199 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-----GSPYP 253
Query: 398 EVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALR-CVDPDSEKRPKMSQVV 456
+ + E K++ R + KPA L + +R C +RP Q+V
Sbjct: 254 GIPVEELFKLLKEGHRMD---------KPAN--CTNELYMMMRDCWHAVPSQRPTFKQLV 302
Query: 457 RMLE 460
L+
Sbjct: 303 EDLD 306
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 134/304 (44%), Gaps = 45/304 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVY--------KGRLINGSEVAVKKLLNNLGQAE-KEFRVE 232
E ++ + LGEG +G V K + VAVK L ++ + + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR-ARRPPGMEYSYDINRV 149
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+T++ + A+ + YL K +HRD+ + N+L+ + K++DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 339 LDS-GESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPAN 397
+++ TT ++APE + +SD++SFGVL+ E T G P
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-----GSPYP 261
Query: 398 EVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALR-CVDPDSEKRPKMSQVV 456
+ + E K++ R + KPA L + +R C +RP Q+V
Sbjct: 262 GIPVEELFKLLKEGHRMD---------KPAN--CTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 457 RMLE 460
L+
Sbjct: 311 EDLD 314
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 194 LGEGGYGVVYKGRLINGS----EVAVKKLLNN-LGQAEK--EFRVEVEAIGHVRHKNLVR 246
LG+G +GVV +G S VAVK L + L Q E +F EV A+ + H+NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L G + +M V E G+L L ++QG+ + + A+ + YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK- 134
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG--TFGYVAPEYANT 364
+ +HRD+ + N+L+ K+ DFGL + L + H + F + APE T
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 365 GMLNEKSDIYSFGVLLLEAVT-GRDP 389
+ SD + FGV L E T G++P
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 194 LGEGGYGVVYKG--RLINGSEVAVKKLLNNLGQ---AEKEFRVEVEAIGHVRHKNLVRLL 248
LG G +G V KG ++ + K+L N + E E + + + +VR++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
G C E MLV E G L ++L + E +V +G + YL E+
Sbjct: 437 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLEES--- 488
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFG--YVAPEYANTGM 366
VHRD+ + N+L+ + AK+SDFGL+K L + E++ + G + + APE N
Sbjct: 489 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 548
Query: 367 LNEKSDIYSFGVLLLEAVT-GRDP 389
+ KSD++SFGVL+ EA + G+ P
Sbjct: 549 FSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 194 LGEGGYGVVYKG--RLINGSEVAVKKLLNNLGQ---AEKEFRVEVEAIGHVRHKNLVRLL 248
LG G +G V KG ++ + K+L N + E E + + + +VR++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
G C E MLV E G L ++L + E +V +G + YL E+
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLEES--- 146
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFG--YVAPEYANTGM 366
VHRD+ + N+L+ + AK+SDFGL+K L + E++ + G + + APE N
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 367 LNEKSDIYSFGVLLLEAVT-GRDP 389
+ KSD++SFGVL+ EA + G+ P
Sbjct: 207 FSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 194 LGEGGYGVVYKG--RLINGSEVAVKKLLNNLGQ---AEKEFRVEVEAIGHVRHKNLVRLL 248
LG G +G V KG ++ + K+L N + E E + + + +VR++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
G C E MLV E G L ++L + E +V +G + YL E+
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLEES--- 146
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFG--YVAPEYANTGM 366
VHRD+ + N+L+ + AK+SDFGL+K L + E++ + G + + APE N
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 367 LNEKSDIYSFGVLLLEAVT-GRDP 389
+ KSD++SFGVL+ EA + G+ P
Sbjct: 207 FSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLING-------SEVAVKKLLNNLGQAEK-EFRVEV 233
E+A + + LG+G +G+VY+G + G + VA+K + E+ EF E
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG---AMRNQGNLTWEARMK 290
+ ++VRLLG +G +++ E + G+L+ +L M N L + K
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 139
Query: 291 VIIGT---AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHI 346
+I A +AYL+ K VHRD+ + N ++ ++F K+ DFG+ + + ++
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 347 TTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + +++PE G+ SD++SFGV+L E T
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 26/270 (9%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLN-NLGQA-EKEFRVEVEAIGHV 239
E+ + F + LG G GVV+K V +KL++ + A + E++ +
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
+V G + E+++ G+L+Q L A G + + KV I K L
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGL 136
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYVA 358
YL E + K++HRD+K SNIL++ K+ DFG++ +L+DS + +GT Y++
Sbjct: 137 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMS 190
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVG-------- 410
PE + +SDI+S G+ L+E GR P+ G + + + E L +V
Sbjct: 191 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSG--SGSMAIFELLDYIVNEPPPKLPS 248
Query: 411 ---TRRAEEVVDPNLEVKPATRALKRSLLV 437
+ ++ V+ L PA RA + L+V
Sbjct: 249 GVFSLEFQDFVNKCLIKNPAERADLKQLMV 278
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGR---LING---SEVAVKKLLNNLGQAEK-EFRVEVE 234
E++ + + LG+G +G+VY+G +I G + VAVK + + E+ EF E
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG----AMRNQGNL--TWEAR 288
+ ++VRLLG +G ++V E + +G+L+ +L A N G T +
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 289 MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHIT 347
+++ A +AYL+ K VHRD+ + N ++ +F K+ DFG+ + + ++
Sbjct: 132 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 188
Query: 348 TRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + ++APE G+ SD++SFGV+L E +
Sbjct: 189 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 193 VLGEGGYGVVYKGR-LINGSEVAVK---KLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
+G+G + V R ++ G EVAV+ K N +K FR EV + + H N+V+L
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
LV EY + G + +L HG M+ + EAR K A+ Y H+
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----EARAK-FRQIVSAVQYCHQKF 133
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTG 365
+VHRD+K+ N+L+D + N K++DFG + G T G+ Y APE +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKK 188
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ D++S GV+L V+G P D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 30/243 (12%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLIN--------GSEVAVKKLLNNLGQAE-KEFRVE 232
E+ +R LGEG +G V I ++VAVK L ++ + + + E
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ-ARRPPGLEYCYNPSHN 127
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
L+ + + A+ + YL K +HRD+ + N+L+ ++ K++DFGLA+
Sbjct: 128 PEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD 184
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPA 396
+ + + TT ++APE + +SD++SFGVLL E T G P G P
Sbjct: 185 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-GVPV 243
Query: 397 NEV 399
E+
Sbjct: 244 EEL 246
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 194 LGEGGYGVVYKG--RLINGSEVAVKKLLNNLGQ---AEKEFRVEVEAIGHVRHKNLVRLL 248
LG G +G V KG ++ + K+L N + E E + + + +VR++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
G C E MLV E G L ++L + E +V +G + YL E+
Sbjct: 438 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLEES--- 489
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFG--YVAPEYANTGM 366
VHRD+ + N+L+ + AK+SDFGL+K L + E++ + G + + APE N
Sbjct: 490 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 549
Query: 367 LNEKSDIYSFGVLLLEAVT-GRDP 389
+ KSD++SFGVL+ EA + G+ P
Sbjct: 550 FSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 20/220 (9%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSE--------VAVKKLLNNLGQAEKEFRVEV 233
++ F VLG G YG V+ R I+G + V K + + + R E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVI 292
+ + H+R + L Y + ++ L+ +Y+N G L + H + R + E +++
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL--FTHLSQRERFT---EHEVQIY 164
Query: 293 IG-TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVM 351
+G AL +LH+ +++RDIK NIL+D + ++DFGL+K + E+
Sbjct: 165 VGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC 221
Query: 352 GTFGYVAPEYANTG--MLNEKSDIYSFGVLLLEAVTGRDP 389
GT Y+AP+ G ++ D +S GVL+ E +TG P
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 136/304 (44%), Gaps = 45/304 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVY--------KGRLINGSEVAVKKLLNNLGQAE-KEFRVE 232
E ++ + LGEG +G V K + VAVK L ++ + + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR-ARRPPGMEYSYDINRV 149
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+T++ + A+ + YL K +HRD+ + N+L+ + +++DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARD 206
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPAN 397
+++ + + TT ++APE + +SD++SFGVL+ E T G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-----GSPYP 261
Query: 398 EVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALR-CVDPDSEKRPKMSQVV 456
+ + E K++ R + KPA L + +R C +RP Q+V
Sbjct: 262 GIPVEELFKLLKEGHRMD---------KPAN--CTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 457 RMLE 460
L+
Sbjct: 311 EDLD 314
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 194 LGEGGYGVVYKG--RLINGSEVAVKKLLNNLGQ---AEKEFRVEVEAIGHVRHKNLVRLL 248
LG G +G V KG ++ + K+L N + E E + + + +VR++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
G C E MLV E G L ++L + E +V +G + YL E+
Sbjct: 93 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLEES--- 144
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTF--GYVAPEYANTGM 366
VHRD+ + N+L+ + AK+SDFGL+K L + E++ + G + + APE N
Sbjct: 145 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 204
Query: 367 LNEKSDIYSFGVLLLEAVT-GRDP 389
+ KSD++SFGVL+ EA + G+ P
Sbjct: 205 FSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 31/229 (13%)
Query: 193 VLGEGGYGVVYKGRLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYC 251
V G +G V+K +L+N VAVK + + + E+ EV ++ ++H+N+++ +G
Sbjct: 31 VKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAE 87
Query: 252 IEG----VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI- 306
G V L+ + G+L +L + ++W + A+ LAYLHE I
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLKANV-----VSWNELCHIAETMARGLAYLHEDIP 142
Query: 307 ------EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR-VMGTFGYVAP 359
+P + HRDIKS N+L+ + A ++DFGLA ++G+S T +GT Y+AP
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
Query: 360 EYANTGMLNEKS-----DIYSFGVLLLE----AVTGRDPVD-YGRPANE 398
E + ++ D+Y+ G++L E PVD Y P E
Sbjct: 203 EVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE 251
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLING-------SEVAVKKLLNNLGQAEK-EFRVEV 233
E+A + + LG+G +G+VY+G + G + VA+K + E+ EF E
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 73
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG---AMRNQGNLTWEARMK 290
+ ++VRLLG +G +++ E + G+L+ +L M N L + K
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 291 VIIGT---AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHI 346
+I A +AYL+ K VHRD+ + N ++ ++F K+ DFG+ + + ++
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 190
Query: 347 TTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + +++PE G+ SD++SFGV+L E T
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 30/243 (12%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLIN--------GSEVAVKKLLNNLGQAE-KEFRVE 232
E+ +R LGEG +G V I ++VAVK L ++ + + + E
Sbjct: 17 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 76
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 77 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ-ARRPPGLEYSYNPSHN 135
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
L+ + + A+ + YL K +HRD+ + N+L+ ++ K++DFGLA+
Sbjct: 136 PEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD 192
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPA 396
+ + + TT ++APE + +SD++SFGVLL E T G P G P
Sbjct: 193 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-GVPV 251
Query: 397 NEV 399
E+
Sbjct: 252 EEL 254
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 30/243 (12%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLIN--------GSEVAVKKLLNNLGQAE-KEFRVE 232
E+ +R LGEG +G V I ++VAVK L ++ + + + E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ-ARRPPGLEYCYNPSHN 142
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
L+ + + A+ + YL K +HRD+ + N+L+ ++ K++DFGLA+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPA 396
+ + + TT ++APE + +SD++SFGVLL E T G P G P
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-GVPV 258
Query: 397 NEV 399
E+
Sbjct: 259 EEL 261
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 19/221 (8%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLING-------SEVAVKKLLNNLGQAEK-EFRV 231
+ E+A + + LG+G +G+VY+G + G + VA+K + E+ EF
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 232 EVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG---AMRNQGNLTWEAR 288
E + ++VRLLG +G +++ E + G+L+ +L M N L +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 289 MKVIIGT---AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGES 344
K+I A +AYL+ K VHRD+ + N ++ ++F K+ DFG+ + + ++
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 345 HITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + +++PE G+ SD++SFGV+L E T
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 30/243 (12%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLIN--------GSEVAVKKLLNNLGQAE-KEFRVE 232
E+ +R LGEG +G V I ++VAVK L ++ + + + E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ-ARRPPGLEYSYNPSHN 142
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
L+ + + A+ + YL K +HRD+ + N+L+ ++ K++DFGLA+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPA 396
+ + + TT ++APE + +SD++SFGVLL E T G P G P
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-GVPV 258
Query: 397 NEV 399
E+
Sbjct: 259 EEL 261
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 15/255 (5%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSEVAVKKLLN--NLGQAEKEFRVEVEAIGHVRHKNLV 245
F+ +G+G +G V+KG +V K+++ ++ + E+ + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 246 RLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
+ G ++G ++ EY+ G+ L ++ + +K I+ K L YLH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA--TMLKEIL---KGLDYLHSE 139
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTG 365
K +HRDIK++N+L+ ++ + K++DFG+A L + T V GT ++APE
Sbjct: 140 ---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQS 195
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEW--LKMMVG--TRRAEEVVDPN 421
+ K+DI+S G+ +E G P P + L+ +VG T+ +E +D
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDAC 255
Query: 422 LEVKPATRALKRSLL 436
L P+ R + LL
Sbjct: 256 LNKDPSFRPTAKELL 270
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL-------LNNLGQAEKEFRV 231
D + + + LG G +G V G + G +VAVK L L+ +G+ ++E
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE--- 61
Query: 232 EVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEARM 289
++ + RH ++++L +V EYV+ G L ++ HG + EAR
Sbjct: 62 -IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM-----EAR- 114
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR 349
++ A+ Y H + VVHRD+K N+L+D NAK++DFGL+ ++ GE
Sbjct: 115 RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRD 169
Query: 350 VMGTFGYVAPEYANTGML-NEKSDIYSFGVLLLEAVTGRDPVD 391
G+ Y APE + + + DI+S GV+L + G P D
Sbjct: 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 30/243 (12%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLIN--------GSEVAVKKLLNNLGQAE-KEFRVE 232
E+ +R LGEG +G V I ++VAVK L ++ + + + E
Sbjct: 13 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 72
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 73 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ-ARRPPGLEYSYNPSHN 131
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
L+ + + A+ + YL K +HRD+ + N+L+ ++ K++DFGLA+
Sbjct: 132 PEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD 188
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPA 396
+ + + TT ++APE + +SD++SFGVLL E T G P G P
Sbjct: 189 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-GVPV 247
Query: 397 NEV 399
E+
Sbjct: 248 EEL 250
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 30/243 (12%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLIN--------GSEVAVKKLLNNLGQAE-KEFRVE 232
E+ +R LGEG +G V I ++VAVK L ++ + + + E
Sbjct: 16 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 75
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 76 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ-ARRPPGLEYSYNPSHN 134
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
L+ + + A+ + YL K +HRD+ + N+L+ ++ K++DFGLA+
Sbjct: 135 PEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD 191
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPA 396
+ + + TT ++APE + +SD++SFGVLL E T G P G P
Sbjct: 192 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-GVPV 250
Query: 397 NEV 399
E+
Sbjct: 251 EEL 253
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLING-------SEVAVKKLLNNLGQAEK-EFRVEV 233
E+A + + LG+G +G+VY+G + G + VA+K + E+ EF E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 72
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG---AMRNQGNLTWEARMK 290
+ ++VRLLG +G +++ E + G+L+ +L M N L + K
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 291 VIIGT---AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHI 346
+I A +AYL+ K VHRD+ + N ++ ++F K+ DFG+ + + ++
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 347 TTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + +++PE G+ SD++SFGV+L E T
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLING-------SEVAVKKLLNNLGQAEK-EFRVEV 233
E+A + + LG+G +G+VY+G + G + VA+K + E+ EF E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 72
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG---AMRNQGNLTWEARMK 290
+ ++VRLLG +G +++ E + G+L+ +L M N L + K
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 291 VIIGT---AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHI 346
+I A +AYL+ K VHRD+ + N ++ ++F K+ DFG+ + + ++
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 347 TTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + +++PE G+ SD++SFGV+L E T
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
F ++G GG+G V+K + I+G +K++ N +AE+E V+A+ + H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVH 68
Query: 247 LLGYCIEGVHR-----------------MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
G C +G + E+ + G LEQW+ R L +
Sbjct: 69 YNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE--KRRGEKLDKVLAL 125
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR 349
++ K + Y+H K+++RD+K SNI + D K+ DFGL L + R
Sbjct: 126 ELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--XR 180
Query: 350 VMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
GT Y++PE ++ ++ D+Y+ G++L E
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 213
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 194 LGEGGYGVVYKG--RLINGSEVAVKKLLNNLGQ---AEKEFRVEVEAIGHVRHKNLVRLL 248
LG G +G V KG ++ + K+L N + E E + + + +VR++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
G C E MLV E G L ++L + E +V +G + YL E+
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLEES--- 130
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTF--GYVAPEYANTGM 366
VHRD+ + N+L+ + AK+SDFGL+K L + E++ + G + + APE N
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 367 LNEKSDIYSFGVLLLEAVT-GRDP 389
+ KSD++SFGVL+ EA + G+ P
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 194 LGEGGYGVVYKG--RLINGSEVAVKKLLNNLGQ---AEKEFRVEVEAIGHVRHKNLVRLL 248
LG G +G V KG ++ + K+L N + E E + + + +VR++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
G C E MLV E G L ++L + E +V +G + YL E+
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLEES--- 136
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTF--GYVAPEYANTGM 366
VHRD+ + N+L+ + AK+SDFGL+K L + E++ + G + + APE N
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 367 LNEKSDIYSFGVLLLEAVT-GRDP 389
+ KSD++SFGVL+ EA + G+ P
Sbjct: 197 FSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 192 NVLGEGGYGVVYKGRL-INGSEVAVKKL-------LNNLGQAEKEFRVEVEAIGHVRHKN 243
+ LG G +G V G+ + G +VAVK L L+ +G+ R E++ + RH +
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGK----IRREIQNLKLFRHPH 77
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+++L +V EYV+ G L ++ G L + ++ + Y H
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYIC----KNGRLDEKESRRLFQQILSGVDYCH 133
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYAN 363
+ VVHRD+K N+L+D NAK++DFGL+ ++ GE G+ Y APE +
Sbjct: 134 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRXSCGSPNYAAPEVIS 188
Query: 364 TGML-NEKSDIYSFGVLLLEAVTGRDPVD 391
+ + DI+S GV+L + G P D
Sbjct: 189 GRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 128/275 (46%), Gaps = 28/275 (10%)
Query: 181 LEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLN-NLGQA-EKEFRVEVEAIGH 238
+E+ + F + LG G GVV+K V +KL++ + A + E++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+V G + E+++ G+L+Q L A G + + KV I K
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKG 116
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYV 357
L YL E + K++HRD+K SNIL++ K+ DFG++ +L+DS + +GT Y+
Sbjct: 117 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYM 170
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV-------DYGRPANEVNLVEWL----- 405
+PE + +SDI+S G+ L+E GR P+ D P L++++
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPP 230
Query: 406 -KMMVGTRRAE--EVVDPNLEVKPATRALKRSLLV 437
K+ G E + V+ L PA RA + L+V
Sbjct: 231 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 265
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 193 VLGEGGYGVVYKGR-LINGSEVAVK---KLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
+G+G + V R ++ G EVAV+ K N +K FR EV + + H N+V+L
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
LV EY + G + +L HG M+ + EAR K A+ Y H+
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----EARAK-FRQIVSAVQYCHQKF 133
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTG 365
+VHRD+K+ N+L+D + N K++DFG + G G+ Y APE +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPELFQGKK 188
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ D++S GV+L V+G P D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 194 LGEGGYGVVYKG--RLINGSEVAVKKLLNNLGQ---AEKEFRVEVEAIGHVRHKNLVRLL 248
LG G +G V KG ++ + K+L N + E E + + + +VR++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
G C E MLV E G L ++L + E +V +G + YL E+
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLEES--- 126
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTF--GYVAPEYANTGM 366
VHRD+ + N+L+ + AK+SDFGL+K L + E++ + G + + APE N
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 367 LNEKSDIYSFGVLLLEAVT-GRDP 389
+ KSD++SFGVL+ EA + G+ P
Sbjct: 187 FSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 193 VLGEGGYGVVYKGR-LINGSEVAVK---KLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
+G+G + V R ++ G EVAVK K N +K FR EV + + H N+V+L
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
LV EY + G + +L HG M+ + EAR K A+ Y H+
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----EARAK-FRQIVSAVQYCHQKF 133
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTG 365
+VHRD+K+ N+L+D + N K++DFG + G G Y APE +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGKK 188
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ D++S GV+L V+G P D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 39/225 (17%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLV 245
F LG GG+GVV++ + ++ A+K++ L N A ++ EV+A+ + H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 246 RLLGYCIEG------------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEAR----- 288
R +E V+ + + NL+ W++G T E R
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNG------RCTIEERERSVC 120
Query: 289 MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHIT- 347
+ + + A+A+ +LH ++HRD+K SNI + KV DFGL +D E T
Sbjct: 121 LHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 348 ----------TRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
T +GT Y++PE + + K DI+S G++L E
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 194 LGEGGYGVVYKG--RLINGSEVAVKKLLNNLGQ---AEKEFRVEVEAIGHVRHKNLVRLL 248
LG G +G V KG ++ + K+L N + E E + + + +VR++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
G C E MLV E G L ++L + E +V +G + YL E+
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLEES--- 124
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTF--GYVAPEYANTGM 366
VHRD+ + N+L+ + AK+SDFGL+K L + E++ + G + + APE N
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 367 LNEKSDIYSFGVLLLEAVT-GRDP 389
+ KSD++SFGVL+ EA + G+ P
Sbjct: 185 FSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 193 VLGEGGYGVVYKGR-LINGSEVAVK---KLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
+G+G + V R ++ G EVA+K K N +K FR EV + + H N+V+L
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLF 77
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L+ EY + G + +L HG M+ + EAR K A+ Y H+
Sbjct: 78 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-----EARSK-FRQIVSAVQYCHQK- 130
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTG 365
++VHRD+K+ N+L+D + N K++DFG + G T G+ Y APE +
Sbjct: 131 --RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT--FCGSPPYAAPELFQGKK 186
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ D++S GV+L V+G P D
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLING-------SEVAVKKLLNNLGQAEK-EFRVEV 233
E+A + + LG+G +G+VY+G + G + VA+K + E+ EF E
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 101
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG---AMRNQGNLTWEARMK 290
+ ++VRLLG +G +++ E + G+L+ +L M N L + K
Sbjct: 102 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 161
Query: 291 VIIGT---AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHI 346
+I A +AYL+ K VHRD+ + N ++ ++F K+ DFG+ + + ++
Sbjct: 162 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 218
Query: 347 TTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + +++PE G+ SD++SFGV+L E T
Sbjct: 219 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 101/225 (44%), Gaps = 35/225 (15%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
F VLG+G +G V K R ++ A+KK+ + + EV + + H+ +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVVR 66
Query: 247 LLGYCIE---------GVHR----MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+E V + + EY N L +H NQ + + I+
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK---------LLDS--- 341
+AL+Y+H ++HR++K NI ID+ N K+ DFGLAK LDS
Sbjct: 127 ---EALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 342 -GESHITTRVMGTFGYVAPEYAN-TGMLNEKSDIYSFGVLLLEAV 384
G S T +GT YVA E + TG NEK D YS G++ E +
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 43/226 (19%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
F ++G GG+G V+K + I+G ++++ N +AE+E V+A+ + H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVH 69
Query: 247 LLGYCIEGVHR------------------------------MLVYEYVNNGNLEQWLHGA 276
G C +G + E+ + G LEQW+
Sbjct: 70 YNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE-- 126
Query: 277 MRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA 336
R L +++ K + Y+H K++HRD+K SNI + D K+ DFGL
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 337 KLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
L + TR GT Y++PE ++ ++ D+Y+ G++L E
Sbjct: 184 TSLKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 135/304 (44%), Gaps = 45/304 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVY--------KGRLINGSEVAVKKLLNNLGQAE-KEFRVE 232
E ++ + LGEG +G V K + VAVK L ++ + + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ Y + GNL ++L A R G
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLR-ARRPPGMEYSYDINRV 149
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+T++ + A+ + YL K +HRD+ + N+L+ + K++DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPAN 397
+++ + + TT ++APE + +SD++SFGVL+ E T G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-----GSPYP 261
Query: 398 EVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALR-CVDPDSEKRPKMSQVV 456
+ + E K++ R + KPA L + +R C +RP Q+V
Sbjct: 262 GIPVEELFKLLKEGHRMD---------KPAN--CTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 457 RMLE 460
L+
Sbjct: 311 EDLD 314
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 114/242 (47%), Gaps = 28/242 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLIN--------GSEVAVKKLLNNLGQAE-KEFRVE 232
E+ +R LGEG +G V I ++VAVK L ++ + + + E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG------------AMRN 279
+E + + +HKN++ LLG C + ++ EY + GNL ++L +
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNP 143
Query: 280 QGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL 339
+ L+ + + A+ + YL K +HRD+ + N+L+ ++ K++DFGLA+ +
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 340 DSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPAN 397
+ + TT ++APE + +SD++SFGVLL E T G P G P
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-GVPVE 259
Query: 398 EV 399
E+
Sbjct: 260 EL 261
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 45/304 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLIN--------GSEVAVKKLLNNLGQAE-KEFRVE 232
E+ +R LGEG +G V I ++VAVK L ++ + + + E
Sbjct: 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 124
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ EY + GNL ++L A R G
Sbjct: 125 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ-ARRPPGLEYSYNPSHN 183
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
L+ + + A+ + YL K +HRD+ + N+L+ ++ K++DFGLA+
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD 240
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPAN 397
+ + + TT ++APE + +SD++SFGVLL E T G P
Sbjct: 241 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-----GSPYP 295
Query: 398 EVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALR-CVDPDSEKRPKMSQVV 456
V + E K++ R + KP+ L + +R C +RP Q+V
Sbjct: 296 GVPVEELFKLLKEGHRMD---------KPSN--CTNELYMMMRDCWHAVPSQRPTFKQLV 344
Query: 457 RMLE 460
L+
Sbjct: 345 EDLD 348
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 13/213 (6%)
Query: 181 LEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLN-NLGQA-EKEFRVEVEAIGH 238
+E+ + F + LG G GVV+K V +KL++ + A + E++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+V G + E+++ G+L+Q L + G + + KV I K
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKG 116
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYV 357
L YL E + K++HRD+K SNIL++ K+ DFG++ +L+DS + +GT Y+
Sbjct: 117 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYM 170
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
+PE + +SDI+S G+ L+E GR P+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 19/221 (8%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLING-------SEVAVKKLLNNLGQAEK-EFRV 231
+ E+A + + LG+G +G+VY+G + G + VA+K + E+ EF
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 232 EVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG---AMRNQGNLTWEAR 288
E + ++VRLLG +G +++ E + G+L+ +L M N L +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 289 MKVIIGT---AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGES 344
K+I A +AYL+ K VHRD+ + N + ++F K+ DFG+ + + ++
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 345 HITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + +++PE G+ SD++SFGV+L E T
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 27/224 (12%)
Query: 188 FSAENVLGEGGYGVVYKG-RLINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNL 244
F +++LGEG YGVV G VA+KK+ + A + R E++ + H +H+N+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENI 71
Query: 245 VRLLGY----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
+ + E + + + + + +L + + M + ++ + I T +A+
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRAVK 126
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLD---------SGESHITTRVM 351
LH + V+HRD+K SN+LI+ + KV DFGLA+++D +G+ T +
Sbjct: 127 VLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV 183
Query: 352 GTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGR 394
T Y APE T ++ D++S G +L E R P+ GR
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGR 226
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 13/213 (6%)
Query: 181 LEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLN-NLGQA-EKEFRVEVEAIGH 238
+E+ + F + LG G GVV+K V +KL++ + A + E++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+V G + E+++ G+L+Q L + G + + KV I K
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKG 116
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYV 357
L YL E + K++HRD+K SNIL++ K+ DFG++ +L+DS + +GT Y+
Sbjct: 117 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYM 170
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
+PE + +SDI+S G+ L+E GR P+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 13/213 (6%)
Query: 181 LEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLN-NLGQA-EKEFRVEVEAIGH 238
+E+ + F + LG G GVV+K V +KL++ + A + E++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+V G + E+++ G+L+Q L A G + + KV I K
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKG 116
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYV 357
L YL E + K++HRD+K SNIL++ K+ DFG++ +L+DS + +GT Y+
Sbjct: 117 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYM 170
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
+PE + +SDI+S G+ L+E GR P+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 13/213 (6%)
Query: 181 LEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLN-NLGQA-EKEFRVEVEAIGH 238
+E+ + F + LG G GVV+K V +KL++ + A + E++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 239 VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
+V G + E+++ G+L+Q L A G + + KV I K
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKG 116
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYV 357
L YL E + K++HRD+K SNIL++ K+ DFG++ +L+DS + +GT Y+
Sbjct: 117 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYM 170
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
+PE + +SDI+S G+ L+E GR P+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 27/224 (12%)
Query: 188 FSAENVLGEGGYGVVYKG-RLINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNL 244
F +++LGEG YGVV G VA+KK+ + A + R E++ + H +H+N+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENI 71
Query: 245 VRLLGY----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
+ + E + + + + + +L + + M + ++ + I T +A+
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRAVK 126
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLD---------SGESHITTRVM 351
LH + V+HRD+K SN+LI+ + KV DFGLA+++D +G+ T +
Sbjct: 127 VLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYV 183
Query: 352 GTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGR 394
T Y APE T ++ D++S G +L E R P+ GR
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGR 226
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 16/204 (7%)
Query: 194 LGEGGYGVVYKG--RLINGSEVAVKKLLNNLGQ---AEKEFRVEVEAIGHVRHKNLVRLL 248
LG G +G V KG ++ + K+L N + E E + + + +VR++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
G C E MLV E G L ++L + E +V +G + YL E+
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLEES--- 130
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTF--GYVAPEYANTGM 366
VHRD+ + N+L+ + AK+SDFGL+K L + E+ + G + + APE N
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK 190
Query: 367 LNEKSDIYSFGVLLLEAVT-GRDP 389
+ KSD++SFGVL+ EA + G+ P
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 39/311 (12%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLIN-GSE-----VAVKKLLNNLGQAEKE-FRVEVE 234
E N LG G +G V + G E VAVK L + EKE E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 235 AIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ H+ +H+N+V LLG C G +++ EY G+L +L R L + +
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR---RKSRVLETDPAFAIAN 158
Query: 294 GTAKALAYLHEAIE----------PKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGE 343
TA LH + + +HRD+ + N+L+ + AK+ DFGLA+ + +
Sbjct: 159 STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 344 SHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLV 402
++I ++APE + +SD++S+G+LL E + + L
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-------------LGLN 265
Query: 403 EWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEAD 462
+ ++V ++ + V D +PA A K + C + RP Q+ L+
Sbjct: 266 PYPGILVNSKFYKLVKDGYQMAQPAF-APKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324
Query: 463 DYPFREDRRNR 473
+EDRR R
Sbjct: 325 A---QEDRRER 332
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 133/311 (42%), Gaps = 39/311 (12%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLIN-GSE-----VAVKKLLNNLGQAEKE-FRVEVE 234
E N LG G +G V + G E VAVK L + EKE E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 235 AIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMR--------NQGNLTW 285
+ H+ +H+N+V LLG C G +++ EY G+L +L R N T
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTL 161
Query: 286 EAR--MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGE 343
R + A+ +A+L +HRD+ + N+L+ + AK+ DFGLA+ + +
Sbjct: 162 STRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 344 SHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLV 402
++I ++APE + +SD++S+G+LL E + + L
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-------------LGLN 265
Query: 403 EWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEAD 462
+ ++V ++ + V D +PA A K + C + RP Q+ L+
Sbjct: 266 PYPGILVNSKFYKLVKDGYQMAQPAF-APKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324
Query: 463 DYPFREDRRNR 473
+EDRR R
Sbjct: 325 A---QEDRRER 332
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 137/282 (48%), Gaps = 30/282 (10%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGRLIN-GSEVAVKKLL--NNLGQAEKEFRVEVEAIGHVR 240
+ ++ ++GEG YG+V K R + G VA+KK L ++ +K E++ + +R
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNN---GNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
H+NLV LL C + LV+E+V++ +LE + +G L ++ K +
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-------LDYQVVQKYLFQIIN 135
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ + H ++HRDIK NIL+ K+ DFG A+ L + + + T Y
Sbjct: 136 GIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVATRWYR 191
Query: 358 APEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGT--RRA 414
APE + K+ D+++ G L+ E G +P+ G ++++ + + M +G R
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMG-EPLFPG--DSDIDQLYHIMMCLGNLIPRH 248
Query: 415 EEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
+E+ + N P ++ L ++ +P + PK+S+VV
Sbjct: 249 QELFNKN----PVFAGVR---LPEIKEREPLERRYPKLSEVV 283
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGR---LING---SEVAVKKLLNNLGQAEK-EFRVEVE 234
E++ + + LG+G +G+VY+G +I G + VAVK + + E+ EF E
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG----AMRNQGNL--TWEAR 288
+ ++VRLLG +G ++V E + +G+L+ +L A N G T +
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 289 MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHIT 347
+++ A +AYL+ K VHR++ + N ++ +F K+ DFG+ + + ++
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 348 TRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + ++APE G+ SD++SFGV+L E +
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 30/225 (13%)
Query: 197 GGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEG-- 254
G +G V+K +L+N VAVK Q+ + R E+ + ++H+NL++ + G
Sbjct: 26 GRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQSER-EIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 255 --VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI------ 306
V L+ + + G+L +L G + +TW V ++ L+YLHE +
Sbjct: 84 LEVELWLITAFHDKGSLTDYLKGNI-----ITWNELCHVAETMSRGLSYLHEDVPWCRGE 138
Query: 307 --EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR-VMGTFGYVAPEYAN 363
+P + HRD KS N+L+ + A ++DFGLA + G+ T +GT Y+APE
Sbjct: 139 GHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLE 198
Query: 364 TGMLNEKS-----DIYSFGVLLLEAVT----GRDPVD-YGRPANE 398
+ ++ D+Y+ G++L E V+ PVD Y P E
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEE 243
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 115/225 (51%), Gaps = 22/225 (9%)
Query: 194 LGEGGYGVVYKGRLI----NGSEVAVKKL-LNNLGQAEKE-FRVEVEAIGHVRHKNLVRL 247
+GEG +G K L+ +G + +K++ ++ + E+E R EV + +++H N+V+
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 248 LGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEAR-MKVIIGTAKALAYLHEAI 306
E +V +Y G+L + ++ +G L E + + + AL ++H+
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINA---QKGVLFQEDQILDWFVQICLALKHVHDR- 144
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGM 366
K++HRDIKS NI + + ++ DFG+A++L+S + +GT Y++PE
Sbjct: 145 --KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS-TVELARACIGTPYYLSPEICENKP 201
Query: 367 LNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGT 411
N KSDI++ G +L E T + + G N V LK++ G+
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV-----LKIISGS 241
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGR---LING---SEVAVKKLLNNLGQAEK-EFRVEVE 234
E++ + + LG+G +G+VY+G +I G + VAVK + + E+ EF E
Sbjct: 14 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 73
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG----AMRNQGNL--TWEAR 288
+ ++VRLLG +G ++V E + +G+L+ +L A N G T +
Sbjct: 74 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 133
Query: 289 MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHIT 347
+++ A +AYL+ K VHR++ + N ++ +F K+ DFG+ + + ++
Sbjct: 134 IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 348 TRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT 385
+ + ++APE G+ SD++SFGV+L E +
Sbjct: 191 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 135/304 (44%), Gaps = 45/304 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVY--------KGRLINGSEVAVKKLLNNLGQAE-KEFRVE 232
E ++ + LGEG +G V K + VAVK L ++ + + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 233 VEAIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG---------- 281
+E + + +HKN++ LLG C + ++ Y + GNL ++L A R G
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLR-ARRPPGMEYSYDINRV 149
Query: 282 ---NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+T++ + A+ + YL K +HRD+ + N+L+ + K++DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 339 LDSGESH-ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPAN 397
+++ + + TT ++APE + +SD++SFGVL+ E T G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-----GSPYP 261
Query: 398 EVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALR-CVDPDSEKRPKMSQVV 456
+ + E K++ R + KPA L + +R C +RP Q+V
Sbjct: 262 GIPVEELFKLLKEGHRMD---------KPAN--CTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 457 RMLE 460
L+
Sbjct: 311 EDLD 314
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 26/233 (11%)
Query: 193 VLGEGGYGVVYKGRL-INGSEVAVKKLLNNLG---QAEKEFRVEVEAIGHVRHKNLVRLL 248
+G G YGVV R + G +VA+KK+ N A++ R E++ + H +H N++
Sbjct: 62 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNII--- 117
Query: 249 GYCIEGVHRMLVYE------YVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYL 302
I+ + R V YV +E LH + + LT E + + L Y+
Sbjct: 118 --AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYM 175
Query: 303 HEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES---HITTRVMGTFGYVAP 359
H A +V+HRD+K SN+L+++ K+ DFG+A+ L + + + T + T Y AP
Sbjct: 176 HSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 232
Query: 360 EYA-NTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGT 411
E + + D++S G + E + R + G+ N V+ ++ + M++GT
Sbjct: 233 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQ-LFPGK--NYVHQLQLIMMVLGT 282
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLN-NLGQA-EKEFRVEVEAIGHV 239
E+ + F + LG G GVV+K V +KL++ + A + E++ +
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
+V G + E+++ G+L+Q L A G + + KV I K L
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGL 179
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYVA 358
YL E + K++HRD+K SNIL++ K+ DFG++ +L+DS + +GT Y++
Sbjct: 180 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMS 233
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
PE + +SDI+S G+ L+E GR P+
Sbjct: 234 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 114/232 (49%), Gaps = 26/232 (11%)
Query: 194 LGEGGYGVVYKGRL-INGSEVAVKKLLNNLG---QAEKEFRVEVEAIGHVRHKNLVRLLG 249
+G G YGVV R + G +VA+KK+ N A++ R E++ + H +H N++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNII---- 116
Query: 250 YCIEGVHRMLVYE------YVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
I+ + R V YV +E LH + + LT E + + L Y+H
Sbjct: 117 -AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 175
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES---HITTRVMGTFGYVAPE 360
A +V+HRD+K SN+L+++ K+ DFG+A+ L + + + T + T Y APE
Sbjct: 176 SA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 361 YA-NTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGT 411
+ + D++S G + E + R + G+ N V+ ++ + M++GT
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQ-LFPGK--NYVHQLQLIMMVLGT 281
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLN-NLGQA-EKEFRVEVEAIGHV 239
E+ + F + LG G GVV+K V +KL++ + A + E++ +
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
+V G + E+++ G+L+Q L A G + + KV I K L
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGL 144
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYVA 358
YL E + K++HRD+K SNIL++ K+ DFG++ +L+DS + +GT Y++
Sbjct: 145 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMS 198
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
PE + +SDI+S G+ L+E GR P+
Sbjct: 199 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVK---KLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
+G+G + V R ++ G EVA+K K N +K FR EV + + H N+V+L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIE 307
L+ EY + G + +L HG M+ + EAR K A+ Y H+
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-----EARSK-FRQIVSAVQYCHQK-- 133
Query: 308 PKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGM 366
++VHRD+K+ N+L+D + N K++DFG + G G Y APE +
Sbjct: 134 -RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDAFCGAPPYAAPELFQGKKY 190
Query: 367 LNEKSDIYSFGVLLLEAVTGRDPVD 391
+ D++S GV+L V+G P D
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 133/307 (43%), Gaps = 35/307 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLIN-GSE-----VAVKKLLNNLGQAEKE-FRVEVE 234
E N LG G +G V + G E VAVK L + EKE E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 235 AIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWL----HGAMRNQGNLTWEAR- 288
+ H+ +H+N+V LLG C G +++ EY G+L +L + + E R
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 161
Query: 289 -MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHIT 347
+ A+ +A+L +HRD+ + N+L+ + AK+ DFGLA+ + + ++I
Sbjct: 162 LLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 218
Query: 348 T-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLK 406
++APE + +SD++S+G+LL E + + L +
Sbjct: 219 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-------------LGLNPYPG 265
Query: 407 MMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEADDYPF 466
++V ++ + V D +PA A K + C + RP Q+ L+
Sbjct: 266 ILVNSKFYKLVKDGYQMAQPAF-APKNIYSIMQACWALEPTHRPTFQQICSFLQEQA--- 321
Query: 467 REDRRNR 473
+EDRR R
Sbjct: 322 QEDRRER 328
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 16/212 (7%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFR------VEVEAIGHV 239
++F VLG+G +G V+ + I+GS+ + L +A + R +E + + V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 240 RHKNLVRL-LGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
H +V+L + EG L+ +++ G+L + + T E + A A
Sbjct: 84 NHPFIVKLHYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALA 138
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L +LH +++RD+K NIL+D+E + K++DFGL+K E + GT Y+A
Sbjct: 139 LDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMA 194
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
PE N + +D +SFGVL+ E +TG P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ +GEG YG+V + + VA+KK+ + ++ R E++ + RH+N
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHEN 102
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ +++Q L+ + + + L Y+H
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQ-QLSNDHICYFLYQILRGLKYIH 161
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+LI+ + K+ DFGLA++ D H T + T Y APE
Sbjct: 162 SA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 219 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 251
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 125/268 (46%), Gaps = 26/268 (9%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLN-NLGQA-EKEFRVEVEAIGHV 239
E+ + F + LG G GVV+K V +KL++ + A + E++ +
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
+V G + E+++ G+L+Q L + G + + KV I K L
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGL 120
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYVA 358
YL E + K++HRD+K SNIL++ K+ DFG++ +L+D + +GT Y++
Sbjct: 121 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----EMANEFVGTRSYMS 174
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEV-NLVEW--------LKMMV 409
PE + +SDI+S G+ L+E GR Y RP + L+++ L V
Sbjct: 175 PERLQGTHYSVQSDIWSMGLSLVEMAVGR----YPRPPMAIFELLDYIVNEPPPKLPSAV 230
Query: 410 GTRRAEEVVDPNLEVKPATRALKRSLLV 437
+ ++ V+ L PA RA + L+V
Sbjct: 231 FSLEFQDFVNKCLIKNPAERADLKQLMV 258
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 77
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 78 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRG 133
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 134 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 186
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 27/224 (12%)
Query: 188 FSAENVLGEGGYGVVYKG-RLINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNL 244
F +++LGEG YGVV G VA+KK+ + A + R E++ + H +H+N+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENI 71
Query: 245 VRLLGY----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
+ + E + + + + + +L + + M + ++ + I T +A+
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRAVK 126
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLD---------SGESHITTRVM 351
LH + V+HRD+K SN+LI+ + KV DFGLA+++D +G+ +
Sbjct: 127 VLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV 183
Query: 352 GTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGR 394
T Y APE T ++ D++S G +L E R P+ GR
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGR 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 16/211 (7%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFR------VEVEAIGHV 239
++F VLG+G +G V+ + I+GS+ + L +A + R +E + + V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 240 RHKNLVRL-LGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
H +V+L + EG L+ +++ G+L + + T E + A A
Sbjct: 84 NHPFIVKLHYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALA 138
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L +LH +++RD+K NIL+D+E + K++DFGL+K E + GT Y+A
Sbjct: 139 LDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMA 194
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
PE N + +D +SFGVL+ E +TG P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 16/211 (7%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFR------VEVEAIGHV 239
++F VLG+G +G V+ + I+GS+ + L +A + R +E + + V
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 240 RHKNLVRL-LGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
H +V+L + EG L+ +++ G+L + + T E + A A
Sbjct: 85 NHPFIVKLHYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALA 139
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L +LH +++RD+K NIL+D+E + K++DFGL+K E + GT Y+A
Sbjct: 140 LDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMA 195
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
PE N + +D +SFGVL+ E +TG P
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKGRLI-NGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V + +G ++AVKKL ++ A++ +R E+ + H++H+
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 110
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL E N+ L L GA N LT + +I +
Sbjct: 111 NVIGLLDVFTPATS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 166
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 167 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 219
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N DI+S G ++ E +TGR
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 13/201 (6%)
Query: 194 LGEGGYGVVYKGRL------INGSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVR 246
LG G +G VY+G++ + +VAVK L Q E +F +E I H+N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+G ++ + R ++ E + G+L+ +L R + + M ++ A+ +A + +
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 307 EPK-VVHRDIKSSNILIDDEFN---AKVSDFGLAK-LLDSGESHITTRVMGTFGYVAPEY 361
E +HRDI + N L+ AK+ DFG+A+ + +G M ++ PE
Sbjct: 175 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEA 234
Query: 362 ANTGMLNEKSDIYSFGVLLLE 382
G+ K+D +SFGVLL E
Sbjct: 235 FMEGIFTSKTDTWSFGVLLWE 255
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 87
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 88 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 144 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 196
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 13/201 (6%)
Query: 194 LGEGGYGVVYKGRL------INGSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVR 246
LG G +G VY+G++ + +VAVK L Q E +F +E I H+N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+G ++ + R ++ E + G+L+ +L R + + M ++ A+ +A + +
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 307 EPK-VVHRDIKSSNILIDDEFN---AKVSDFGLAK-LLDSGESHITTRVMGTFGYVAPEY 361
E +HRDI + N L+ AK+ DFG+A+ + +G M ++ PE
Sbjct: 198 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEA 257
Query: 362 ANTGMLNEKSDIYSFGVLLLE 382
G+ K+D +SFGVLL E
Sbjct: 258 FMEGIFTSKTDTWSFGVLLWE 278
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLN-NLGQA-EKEFRVEVEAIGHV 239
E+ + F + LG G GVV K + + +KL++ + A + E++ +
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
+V G + E+++ G+L+Q L A R + E KV I + L
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR----IPEEILGKVSIAVLRGL 127
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYVA 358
AYL E + +++HRD+K SNIL++ K+ DFG++ +L+DS + +GT Y+A
Sbjct: 128 AYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMA 181
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD----------YGRP 395
PE + +SDI+S G+ L+E GR P+ +GRP
Sbjct: 182 PERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRP 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 134/313 (42%), Gaps = 41/313 (13%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLIN-GSE-----VAVKKLLNNLGQAEKE-FRVEVE 234
E N LG G +G V + G E VAVK L + EKE E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 235 AIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWL------------HGAMRNQG 281
+ H+ +H+N+V LLG C G +++ EY G+L +L + + +
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEE 161
Query: 282 NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDS 341
L+ + A+ +A+L +HRD+ + N+L+ + AK+ DFGLA+ + +
Sbjct: 162 QLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 218
Query: 342 GESHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVN 400
++I ++APE + +SD++S+G+LL E + +
Sbjct: 219 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-------------LG 265
Query: 401 LVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
L + ++V ++ + V D +PA A K + C + RP Q+ L+
Sbjct: 266 LNPYPGILVNSKFYKLVKDGYQMAQPAF-APKNIYSIMQACWALEPTHRPTFQQICSFLQ 324
Query: 461 ADDYPFREDRRNR 473
+EDRR R
Sbjct: 325 EQA---QEDRRER 334
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 86
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 87 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 143 LKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRA 195
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 77
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 78 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 134 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 186
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 101
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 102 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 158 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 210
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 100
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 101 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 157 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 209
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 141
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 142 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 199 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 231
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 141
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 142 SA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 199 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 87
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 88 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 144 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 196
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 84
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 143
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 144 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 201 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 233
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 87
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 88 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 144 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 196
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 83
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 84 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 140 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 192
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 24/212 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
EI E LG G +G V+ ++VAVK + E F E + ++H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQH 236
Query: 242 KNLVRLLGYCI-EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L E ++ ++ E++ G+L +L ++ L + A+ +A
Sbjct: 237 DKLVKLHAVVTKEPIY--IITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMA 292
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFG--YVA 358
++ + +HRD++++NIL+ K++DFGLA RV F + A
Sbjct: 293 FIEQR---NYIHRDLRAANILVSASLVCKIADFGLA------------RVGAKFPIKWTA 337
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
PE N G KSD++SFG+LL+E VT GR P
Sbjct: 338 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGRL-INGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 90
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 149
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 150 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 206
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 207 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 239
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGRL-INGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 141
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 142 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 199 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 231
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 86
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 87 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 143 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 195
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 86
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 87 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 143 LKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRA 195
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 86
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 87 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 143 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 195
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 80
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 81 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 136
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 137 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 189
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 141
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 142 SA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 199 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 83
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 84 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 140 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 192
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGXVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 102
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 161
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 162 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 219 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 251
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 78
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 79 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 135 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 187
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 10/197 (5%)
Query: 194 LGEGGYGVVYKGRLI-NGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI 252
+GEG G+V R +G +VAVK + Q + EV + +H N+V + +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
G ++ E++ G L + +Q L E V +ALAYLH V+H
Sbjct: 113 VGEELWVLMEFLQGGALTDIV-----SQVRLNEEQIATVCEAVLQALAYLHAQ---GVIH 164
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RDIKS +IL+ + K+SDFG + S + ++GT ++APE + + + D
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQI-SKDVPKRKXLVGTPYWMAPEVISRSLYATEVD 223
Query: 373 IYSFGVLLLEAVTGRDP 389
I+S G++++E V G P
Sbjct: 224 IWSLGIMVIEMVDGEPP 240
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 83
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 84 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 140 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 192
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 78
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 79 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 135 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 187
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 35/275 (12%)
Query: 184 ATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVK--KLLNNLGQAEKEFRVEVEAIGHVR 240
++++F LG G Y VYKG G VA+K KL + G R E+ + ++
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR-EISLMKELK 61
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVI----IGTA 296
H+N+VRL LV+E+++N +L++++ R GN + ++
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDS--RTVGNTPRGLELNLVKYFQWQLL 118
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGY 356
+ LA+ HE K++HRD+K N+LI+ K+ DFGLA+ + ++ V+ T Y
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWY 174
Query: 357 VAPE-YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAE 415
AP+ + + DI+S G +L E +TG+ P+ G N+ ++ + ++GT
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGK-PLFPG--TNDEEQLKLIFDIMGT---- 227
Query: 416 EVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRP 450
PN + P+ L + +P+ ++RP
Sbjct: 228 ----PNESLWPSVTKLPK--------YNPNIQQRP 250
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 91
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 92 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 147
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 148 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 200
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 92
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 93 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 149 LKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRA 201
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 88
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 89 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 145 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 197
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 93
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 94 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 150 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 202
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 21/279 (7%)
Query: 194 LGEGGYGVV--YKGRLIN---GSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVRL 247
LGEG +G V Y N G VAVK L + G Q ++ E++ + + H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 248 LGYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
G C + + LV EYV G+L +L L A+ + +AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHSQ 136
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG---TFGYVAPEYA 362
+HR++ + N+L+D++ K+ DFGLAK + G + R G F Y APE
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECL 192
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPNL 422
SD++SFGV L E +T D P + L+ + + R E+++
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLTHCDSSQ-SPPTKFLELIGIAQGQMTVLRLTELLERGE 251
Query: 423 EVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
+ + + C + ++ RP ++ +L+
Sbjct: 252 RLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKT 290
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 93
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 94 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 150 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 202
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 194 LGEGGYGVV--YKGRLIN---GSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVRL 247
LGEG +G V Y N G VAVK L G Q ++ E+E + + H+++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 248 LGYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
G C + + LV EYV G+L +L L A+ + +AYLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ-----ICEGMAYLHAQ 130
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG---TFGYVAPEYA 362
+HR + + N+L+D++ K+ DFGLAK + G + R G F Y APE
Sbjct: 131 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECL 186
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRD 388
SD++SFGV L E +T D
Sbjct: 187 KECKFYYASDVWSFGVTLYELLTYCD 212
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 77
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 78 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 134 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 186
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 194 LGEGGYGVV--YKGRLIN---GSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVRL 247
LGEG +G V Y N G VAVK L G Q ++ E+E + + H+++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 248 LGYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
G C + + LV EYV G+L +L L A+ + +AYLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ-----ICEGMAYLHAQ 131
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG---TFGYVAPEYA 362
+HR + + N+L+D++ K+ DFGLAK + G + R G F Y APE
Sbjct: 132 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECL 187
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRD 388
SD++SFGV L E +T D
Sbjct: 188 KECKFYYASDVWSFGVTLYELLTYCD 213
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 100
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 101 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 157 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 209
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHEN 84
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 143
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 144 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 201 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 233
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 92
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 93 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 149 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 201
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHE 93
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 94 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 150 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 202
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 79
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 80 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 135
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 136 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 188
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 101
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 102 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 158 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 210
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 80
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 139
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 140 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 197 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 80
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 139
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 140 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 197 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 87
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 146
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 147 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 203
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 204 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 236
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGS--------EVAVKKLLNNLGQAEKEFRVEVEAIGHV 239
F VLG+GGYG V++ R + G+ +V K ++ + + E + V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
+H +V L+ G L+ EY++ G L L +G + + + AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL----EREGIFMEDTACFYLAEISMAL 134
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAP 359
+LH+ +++RD+K NI+++ + + K++DFGL K + +T GT Y+AP
Sbjct: 135 GHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHXFCGTIEYMAP 190
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
E N D +S G L+ + +TG P
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 88
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 147
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 148 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 204
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 205 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 237
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 79
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 138
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 139 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 195
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 196 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 228
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 145
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 146 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 203 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 235
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 141
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 142 SA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 199 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 231
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 104
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 105 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 161 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 213
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 145
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 146 SA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 203 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 235
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 87
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 88 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 144 LKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRA 196
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 21/279 (7%)
Query: 194 LGEGGYGVV--YKGRLIN---GSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVRL 247
LGEG +G V Y N G VAVK L + G Q ++ E++ + + H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 248 LGYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
G C + + LV EYV G+L +L L A+ + +AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHAQ 136
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG---TFGYVAPEYA 362
+HR++ + N+L+D++ K+ DFGLAK + G + R G F Y APE
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECL 192
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPNL 422
SD++SFGV L E +T D P + L+ + + R E+++
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLTHCDSSQ-SPPTKFLELIGIAQGQMTVLRLTELLERGE 251
Query: 423 EVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
+ + + C + ++ RP ++ +L+
Sbjct: 252 RLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKT 290
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGS--------EVAVKKLLNNLGQAEKEFRVEVEAIGHV 239
F VLG+GGYG V++ R + G+ +V K ++ + + E + V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
+H +V L+ G L+ EY++ G L L +G + + + AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL----EREGIFMEDTACFYLAEISMAL 134
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAP 359
+LH+ +++RD+K NI+++ + + K++DFGL K + +T GT Y+AP
Sbjct: 135 GHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHTFCGTIEYMAP 190
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
E N D +S G L+ + +TG P
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 31/291 (10%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGRLINGSE-VAVKKL-LNNLGQAEKEFRVEVEAIGHVR 240
I + + + V+G G VV E VA+K++ L + E E++A+
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGN----LEQWLHGAMRNQGNLTWEARMKVIIGTA 296
H N+V + LV + ++ G+ ++ + G L ++
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSG----ESHITTRVMG 352
+ L YLH+ + +HRD+K+ NIL+ ++ + +++DFG++ L +G + + +G
Sbjct: 132 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 353 TFGYVAPE-YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGT 411
T ++APE + K+DI+SFG+ +E TG P P +K+++ T
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP---------MKVLMLT 239
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALR-----CVDPDSEKRPKMSQVVR 457
+ + P+LE + + + + R C+ D EKRP ++++R
Sbjct: 240 LQNDP---PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 83
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 84 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D T + T Y A
Sbjct: 140 LKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRA 192
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 193 VLGEGGYGVVYKGR-LINGSEVAVK---KLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
+G+G + V R ++ G EVAVK K N +K FR EV + H N+V+L
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLF 79
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
LV EY + G + +L HG + + EAR K A+ Y H+
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEK-----EARAK-FRQIVSAVQYCHQKF 133
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTG 365
+VHRD+K+ N+L+D + N K++DFG + G G Y APE +
Sbjct: 134 ---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGKK 188
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ D++S GV+L V+G P D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 88
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 89 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHITTRVMGTFGYV 357
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D ++ TR Y
Sbjct: 145 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYR 196
Query: 358 APEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
APE M N+ DI+S G ++ E +TGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 88
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 89 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHITTRVMGTFGYV 357
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D ++ TR Y
Sbjct: 145 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYR 196
Query: 358 APEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
APE M N+ DI+S G ++ E +TGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 88
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 89 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-LLDSGESHITTRVMGTFGYV 357
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D ++ TR Y
Sbjct: 145 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYR 196
Query: 358 APEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
APE M N+ DI+S G ++ E +TGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNN--LGQAEKEFRVE--VEAIGHVRHKNLVRLLG 249
LGEG +G V + K ++ L +++ RVE + + +RH ++++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
++V EY G L ++ R +T + + A+ Y H K
Sbjct: 77 VITTPTDIVMVIEYAG-GELFDYIVEKKR----MTEDEGRRFFQQIICAIEYCHRH---K 128
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGML-N 368
+VHRD+K N+L+DD N K++DFGL+ ++ G T+ G+ Y APE N +
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVINGKLYAG 186
Query: 369 EKSDIYSFGVLLLEAVTGRDPVD 391
+ D++S G++L + GR P D
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 31/291 (10%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGRLINGSE-VAVKKL-LNNLGQAEKEFRVEVEAIGHVR 240
I + + + V+G G VV E VA+K++ L + E E++A+
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 66
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGN----LEQWLHGAMRNQGNLTWEARMKVIIGTA 296
H N+V + LV + ++ G+ ++ + G L ++
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSG----ESHITTRVMG 352
+ L YLH+ + +HRD+K+ NIL+ ++ + +++DFG++ L +G + + +G
Sbjct: 127 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 353 TFGYVAPE-YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGT 411
T ++APE + K+DI+SFG+ +E TG P P +K+++ T
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP---------MKVLMLT 234
Query: 412 RRAEEVVDPNLEVKPATRALKRSLLVALR-----CVDPDSEKRPKMSQVVR 457
+ + P+LE + + + + R C+ D EKRP ++++R
Sbjct: 235 LQNDP---PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 21/278 (7%)
Query: 194 LGEGGYGVV--YKGRLIN---GSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVRL 247
LGEG +G V Y N G VAVK L + G Q ++ E++ + + H+++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 248 LGYCIEG--VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
G C + LV EYV G+L +L L A+ + +AYLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHAQ 153
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG---TFGYVAPEYA 362
+HRD+ + N+L+D++ K+ DFGLAK + G R G F Y APE
Sbjct: 154 ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECL 209
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPNL 422
SD++SFGV L E +T D P + L+ + + R E+++
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLTHCDSSQ-SPPTKFLELIGIAQGQMTVLRLTELLERGE 268
Query: 423 EVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ + + C + ++ RP ++ +L+
Sbjct: 269 RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQ-HLSNDHICYFLYQILRGLKYIH 145
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 146 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 203 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 235
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 28/222 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 102
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGA----MRNQGNLTWEARMKVIIGTAKAL 299
++ I + R E + + L L GA + +L+ + + + L
Sbjct: 103 IIG-----INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGL 157
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYV 357
Y+H A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y
Sbjct: 158 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 358 APEYANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
APE MLN K DI+S G +L E ++ R P+ G+
Sbjct: 215 APEI----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 251
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 13/201 (6%)
Query: 194 LGEGGYGVVYKGRL------INGSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVR 246
LG G +G VY+G++ + +VAVK L Q E +F +E I + H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+G ++ + R ++ E + G+L+ +L R + + M ++ A+ +A + +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 307 EPK-VVHRDIKSSNILIDDEFN---AKVSDFGLAK-LLDSGESHITTRVMGTFGYVAPEY 361
E +HRDI + N L+ AK+ DFG+A+ + + M ++ PE
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 217
Query: 362 ANTGMLNEKSDIYSFGVLLLE 382
G+ K+D +SFGVLL E
Sbjct: 218 FMEGIFTSKTDTWSFGVLLWE 238
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D + + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF----VATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHEN 84
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 143
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 144 SA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 201 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 233
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR-EIKILLRFRHEN 86
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 145
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 146 SA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 203 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 235
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 115/236 (48%), Gaps = 22/236 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVK----KLLNNLGQAEKEFR 230
F I ++R+ + VLG+G +G V+ I G E AVK + + E R
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 81
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EV+ + + H N+++L + + + LV E G L + ++ + +
Sbjct: 82 -EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAAR 136
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDD---EFNAKVSDFGLAKLLDSGESHIT 347
+I + Y+H+ K+VHRD+K N+L++ + N ++ DFGL+ ++ S
Sbjct: 137 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKM 191
Query: 348 TRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVE 403
+GT Y+APE + G +EK D++S GV+L ++G P + ANE ++++
Sbjct: 192 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDILK 243
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 77
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 78 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D + + T Y A
Sbjct: 134 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF----VATRWYRA 186
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D + + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF----VATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 172 WGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQA 225
W +RD+ + +VLG G + V +L+ +A K L G
Sbjct: 10 WKQAEDIRDI------YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSM 63
Query: 226 EKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTW 285
E E V + ++H N+V L G H L+ + V+ G L + +G T
Sbjct: 64 ENEIAV----LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTE 115
Query: 286 EARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNIL---IDDEFNAKVSDFGLAKLLDSG 342
++I A+ YLH+ +VHRD+K N+L +D++ +SDFGL+K+ D G
Sbjct: 116 RDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
Query: 343 ESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
+ + GT GYVAPE ++ D +S GV+ + G P
Sbjct: 173 S--VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 15/215 (6%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGRLINGSEV----AVKKLLNNLGQAEKEFRVEVEAIGH 238
+ F V+G G Y V RL + VKK L N + + E
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 239 VRHKNLVRLLGYCIEGVHRML-VYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
+ + L C + R+ V EYVN G+L H M+ Q L E +
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFH--MQRQRKLPEEHARFYSAEISL 117
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL-LDSGESHITTRVMGTFGY 356
AL YLHE +++RD+K N+L+D E + K++D+G+ K L G++ T+ GT Y
Sbjct: 118 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 172
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
+APE D ++ GVL+ E + GR P D
Sbjct: 173 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 37/254 (14%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYGVVYKGRLI-NGSEVAVKKLLNNLGQAEKEFRVEVE 234
F + +E+ R VL EGG+ VY+ + + +G E A+K+LL+N E++ R ++
Sbjct: 18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQ 74
Query: 235 AIGHVR----HKNLVRLLGYCI-------EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNL 283
+ ++ H N+V+ G L+ + G L ++L M ++G L
Sbjct: 75 EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK-KMESRGPL 133
Query: 284 TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSG- 342
+ + +K+ T +A+ ++H +P ++HRD+K N+L+ ++ K+ DFG A +
Sbjct: 134 SCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYP 192
Query: 343 ------------ESHITTRVMGTFGYVAPE----YANTGMLNEKSDIYSFGVLLLEAVTG 386
E IT T Y PE Y+N + EK DI++ G +L
Sbjct: 193 DYSWSAQRRALVEEEITRNT--TPMYRTPEIIDLYSNFP-IGEKQDIWALGCILYLLCFR 249
Query: 387 RDPVDYGRPANEVN 400
+ P + G VN
Sbjct: 250 QHPFEDGAKLRIVN 263
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKE-FRVEVEAIGHVRHKNLVRLLGYCI 252
LG+G +G VYK + S +A K+++ + E E + VE++ + H N+V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII-GTAKALAYLHEAIEPKVV 311
+ ++ E+ G ++ + + + LT E++++V+ T AL YLH+ K++
Sbjct: 105 YENNLWILIEFCAGGAVDAVM---LELERPLT-ESQIQVVCKQTLDALNYLHDN---KII 157
Query: 312 HRDIKSSNILIDDEFNAKVSDFGLA----KLLDSGESHITTRVMGTFGYVAPEYANTGML 367
HRD+K+ NIL + + K++DFG++ + + +S I T V E +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 368 NEKSDIYSFGVLLLEAVTGRDP 389
+ K+D++S G+ L+E P
Sbjct: 218 DYKADVWSLGITLIEMAEIEPP 239
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA++K+ + ++ R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 145
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H T + T Y APE
Sbjct: 146 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 203 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 235
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKE-FRVEVEAIGHVRHKNLVRLLGYCI 252
LG+G +G VYK + S +A K+++ + E E + VE++ + H N+V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII-GTAKALAYLHEAIEPKVV 311
+ ++ E+ G ++ + + + LT E++++V+ T AL YLH+ K++
Sbjct: 105 YENNLWILIEFCAGGAVDAVM---LELERPLT-ESQIQVVCKQTLDALNYLHDN---KII 157
Query: 312 HRDIKSSNILIDDEFNAKVSDFGLA----KLLDSGESHITTRVMGTFGYVAPEYANTGML 367
HRD+K+ NIL + + K++DFG++ + + +S I T V E +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 368 NEKSDIYSFGVLLLEAVTGRDP 389
+ K+D++S G+ L+E P
Sbjct: 218 DYKADVWSLGITLIEMAEIEPP 239
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 194 LGEGGYGVVYKGRL------INGSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVR 246
LG G +G VY+G++ + +VAVK L Q E +F +E I H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+G ++ + R ++ E + G+L+ +L R + + M ++ A+ +A + +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 307 EPK-VVHRDIKSSNILIDDEFN---AKVSDFGLAK-LLDSGESHITTRVMGTFGYVAPEY 361
E +HRDI + N L+ AK+ DFG+A+ + + M ++ PE
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 217
Query: 362 ANTGMLNEKSDIYSFGVLLLE 382
G+ K+D +SFGVLL E
Sbjct: 218 FMEGIFTSKTDTWSFGVLLWE 238
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSEV----AVKKLLNNLGQAEKEFRVEVEAIGHVRHKN 243
F V+G G Y V RL + VKK L N + + E +
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 244 LVRLLGYCIEGVHRML-VYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYL 302
+ L C + R+ V EYVN G+L H M+ Q L E + AL YL
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDL--MFH--MQRQRKLPEEHARFYSAEISLALNYL 137
Query: 303 HEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL-LDSGESHITTRVMGTFGYVAPEY 361
HE +++RD+K N+L+D E + K++D+G+ K L G++ T+ GT Y+APE
Sbjct: 138 HER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEI 192
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
D ++ GVL+ E + GR P D
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 10/197 (5%)
Query: 194 LGEGGYGVV-YKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI 252
+GEG G+V G +VAVKK+ Q + EV + H N+V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
G +V E++ G L + N+ + V + +AL+YLH V+H
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLHNQ---GVIH 164
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RDIKS +IL+ + K+SDFG + S E ++GT ++APE + + D
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQV-SKEVPKRKXLVGTPYWMAPEVISRLPYGTEVD 223
Query: 373 IYSFGVLLLEAVTGRDP 389
I+S G++++E + G P
Sbjct: 224 IWSLGIMVIEMIDGEPP 240
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 67
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 124
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ T V+ T Y APE
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 180
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 181 GCKYYSTAV-----DIWSLGCIFAEMVTRR 205
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 13/201 (6%)
Query: 194 LGEGGYGVVYKGRL------INGSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVR 246
LG G +G VY+G++ + +VAVK L Q E +F +E I + H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+G ++ + R ++ E + G+L+ +L R + + M ++ A+ +A + +
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 307 EPK-VVHRDIKSSNILIDDEFN---AKVSDFGLAK-LLDSGESHITTRVMGTFGYVAPEY 361
E +HRDI + N L+ AK+ DFG+A+ + + M ++ PE
Sbjct: 172 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 231
Query: 362 ANTGMLNEKSDIYSFGVLLLE 382
G+ K+D +SFGVLL E
Sbjct: 232 FMEGIFTSKTDTWSFGVLLWE 252
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 15/215 (6%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGRLINGSEV----AVKKLLNNLGQAEKEFRVEVEAIGH 238
+ F V+G G Y V RL + VKK L N + + E
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 239 VRHKNLVRLLGYCIEGVHRML-VYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
+ + L C + R+ V EYVN G+L H M+ Q L E +
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFH--MQRQRKLPEEHARFYSAEISL 121
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL-LDSGESHITTRVMGTFGY 356
AL YLHE +++RD+K N+L+D E + K++D+G+ K L G++ T+ GT Y
Sbjct: 122 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 176
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
+APE D ++ GVL+ E + GR P D
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKGRLIN----GSEVAVKKLLNNLGQAEKE-FRVEV 233
RD EI R +GEG +G V++G ++ VA+K N + +E F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ H ++V+L+G E ++ E G L +L + +L + +
Sbjct: 63 LTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKYSLDLASLILYAY 118
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT 353
+ ALAYL + VHRDI + N+L+ K+ DFGL++ ++ + ++
Sbjct: 119 QLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 354 FGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
++APE N SD++ FGV + E
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ D+GLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 136/289 (47%), Gaps = 32/289 (11%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKGRLI-NGSEVAVKKLLNNL-GQAEKEFRVEVE-A 235
++ E+ + LG G YGVV K R + +G +AVK++ + Q +K ++++ +
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 236 IGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGT 295
+ V V G + E ++ +L+++ + + + K+ +
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSI 162
Query: 296 AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTF 354
KAL +LH + V+HRD+K SN+LI+ K+ DFG++ L+DS I G
Sbjct: 163 VKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA---GCK 217
Query: 355 GYVAPEYANTGMLNE-----KSDIYSFGVLLLEAVTGRDPVD-YGRPANEVNLVEWLKMM 408
Y+APE N LN+ KSDI+S G+ ++E R P D +G P ++ V
Sbjct: 218 PYMAPERINPE-LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV------ 270
Query: 409 VGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVR 457
V +P+ ++ PA + + +C+ +S++RP ++++
Sbjct: 271 --------VEEPSPQL-PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 194 LGEGGYGVVYKGRL------INGSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVR 246
LG G +G VY+G++ + +VAVK L Q E +F +E I H+N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+G ++ + R ++ E + G+L+ +L R + + M ++ A+ +A + +
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 307 EPK-VVHRDIKSSNILIDDEFN---AKVSDFGLAK-LLDSGESHITTRVMGTFGYVAPEY 361
E +HRDI + N L+ AK+ DFG+A+ + + M ++ PE
Sbjct: 174 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 233
Query: 362 ANTGMLNEKSDIYSFGVLLLE 382
G+ K+D +SFGVLL E
Sbjct: 234 FMEGIFTSKTDTWSFGVLLWE 254
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 193 VLGEGGYGVVY--KGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGY 250
VLG G + V+ K RL G A+K + + + E+ + ++H+N+V L
Sbjct: 16 VLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 251 CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKV 310
H LV + V+ G L + +G T + VI A+ YLHE +
Sbjct: 75 YESTTHYYLVMQLVSGGEL----FDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GI 127
Query: 311 VHRDIKSSNIL-IDDEFNAKV--SDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGML 367
VHRD+K N+L + E N+K+ +DFGL+K+ +G I + GT GYVAPE
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYVAPEVLAQKPY 184
Query: 368 NEKSDIYSFGVLLLEAVTGRDP 389
++ D +S GV+ + G P
Sbjct: 185 SKAVDCWSIGVITYILLCGYPP 206
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 194 LGEGGYGVVYKGRL------INGSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVR 246
LG G +G VY+G++ + +VAVK L Q E +F +E I H+N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+G ++ + R ++ E + G+L+ +L R + + M ++ A+ +A + +
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 307 EPK-VVHRDIKSSNILIDDEFN---AKVSDFGLAK-LLDSGESHITTRVMGTFGYVAPEY 361
E +HRDI + N L+ AK+ DFG+A+ + + M ++ PE
Sbjct: 164 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 223
Query: 362 ANTGMLNEKSDIYSFGVLLLE 382
G+ K+D +SFGVLL E
Sbjct: 224 FMEGIFTSKTDTWSFGVLLWE 244
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 129/299 (43%), Gaps = 41/299 (13%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQAE-KEFRVEVE 234
E +R + LG G +G V + + VAVK L +E + E++
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 82
Query: 235 AIGHV-RHKNLVRLLGYCIE-GVHRMLVYEYVNNGNLEQWLHGAMRNQ---------GNL 283
+ H+ H N+V LLG C + G M++ E+ GNL +L + RN+ L
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKDLYKDFL 141
Query: 284 TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGE 343
T E + AK + +L K +HRD+ + NIL+ ++ K+ DFGLA+ +
Sbjct: 142 TLEHLICYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 198
Query: 344 SHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNL 401
++ ++APE + +SD++SFGVLL E + G P P +++
Sbjct: 199 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDE 254
Query: 402 VEWLKMMVGTR-RAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRML 459
++ GTR RA + P + L C + +RP S++V L
Sbjct: 255 EFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 194 LGEGGYGVVYKGRL------INGSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVR 246
LG G +G VY+G++ + +VAVK L Q E +F +E I H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+G ++ + R ++ E + G+L+ +L R + + M ++ A+ +A + +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 307 EPK-VVHRDIKSSNILIDDEFN---AKVSDFGLAK-LLDSGESHITTRVMGTFGYVAPEY 361
E +HRDI + N L+ AK+ DFG+A+ + + M ++ PE
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEA 217
Query: 362 ANTGMLNEKSDIYSFGVLLLE 382
G+ K+D +SFGVLL E
Sbjct: 218 FMEGIFTSKTDTWSFGVLLWE 238
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 34/242 (14%)
Query: 192 NVLGEGGYGVVYKGRLIN------GSEVAVKKLLNNLGQAE-KEFRVEVEAIGHVRHKNL 244
LGEG +G V K + + VAVK L N +E ++ E + V H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 245 VRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMR--------------------NQGNLT 284
++L G C + +L+ EY G+L +L + + ++ LT
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 285 WEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES 344
+ ++ + YL E K+VHRD+ + NIL+ + K+SDFGL++ + +S
Sbjct: 149 MGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 345 HITTRVMGTFG--YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNL 401
++ R G ++A E + +SD++SFGVLL E VT G +P P NL
Sbjct: 206 YV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL 264
Query: 402 VE 403
++
Sbjct: 265 LK 266
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 194 LGEGGYGVVYKGRL------INGSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVR 246
LG G +G VY+G++ + +VAVK L Q E +F +E I H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+G ++ + R ++ E + G+L+ +L R + + M ++ A+ +A + +
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 307 EPK-VVHRDIKSSNILIDDEFN---AKVSDFGLAK-LLDSGESHITTRVMGTFGYVAPEY 361
E +HRDI + N L+ AK+ DFG+A+ + + M ++ PE
Sbjct: 157 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 216
Query: 362 ANTGMLNEKSDIYSFGVLLLE 382
G+ K+D +SFGVLL E
Sbjct: 217 FMEGIFTSKTDTWSFGVLLWE 237
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 32/249 (12%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 110
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 169
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFG 355
AY+H + HRDIK N+L+D D K+ DFG AK L GE S+I +R
Sbjct: 170 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 221
Query: 356 YVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
Y APE S D++S G +L E + G+ P+ G + LVE +K++ GT
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTR 278
Query: 415 EEV--VDPN 421
E++ ++PN
Sbjct: 279 EQIREMNPN 287
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 194 LGEGGYGVVYKGRL------INGSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVR 246
LG G +G VY+G++ + +VAVK L Q E +F +E I H+N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+G ++ + R ++ E + G+L+ +L R + + M ++ A+ +A + +
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 307 EPK-VVHRDIKSSNILIDDEFN---AKVSDFGLAK-LLDSGESHITTRVMGTFGYVAPEY 361
E +HRDI + N L+ AK+ DFG+A+ + + M ++ PE
Sbjct: 149 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 208
Query: 362 ANTGMLNEKSDIYSFGVLLLE 382
G+ K+D +SFGVLL E
Sbjct: 209 FMEGIFTSKTDTWSFGVLLWE 229
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 129/299 (43%), Gaps = 41/299 (13%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQAE-KEFRVEVE 234
E +R + LG G +G V + + VAVK L +E + E++
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 82
Query: 235 AIGHV-RHKNLVRLLGYCIE-GVHRMLVYEYVNNGNLEQWLHGAMRNQ---------GNL 283
+ H+ H N+V LLG C + G M++ E+ GNL +L + RN+ L
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKDLYKDFL 141
Query: 284 TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGE 343
T E + AK + +L K +HRD+ + NIL+ ++ K+ DFGLA+ +
Sbjct: 142 TLEHLIXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDP 198
Query: 344 SHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNL 401
++ ++APE + +SD++SFGVLL E + G P P +++
Sbjct: 199 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDE 254
Query: 402 VEWLKMMVGTR-RAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRML 459
++ GTR RA + P + L C + +RP S++V L
Sbjct: 255 EFXRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 194 LGEGGYGVVYKGRL------INGSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVR 246
LG G +G VY+G++ + +VAVK L Q E +F +E I H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+G ++ + R ++ E + G+L+ +L R + + M ++ A+ +A + +
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 307 EPK-VVHRDIKSSNILIDDEFN---AKVSDFGLAK-LLDSGESHITTRVMGTFGYVAPEY 361
E +HRDI + N L+ AK+ DFG+A+ + + M ++ PE
Sbjct: 157 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 216
Query: 362 ANTGMLNEKSDIYSFGVLLLE 382
G+ K+D +SFGVLL E
Sbjct: 217 FMEGIFTSKTDTWSFGVLLWE 237
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKE-FRVEVEAIGHVRHKNLVRLLGYCI 252
LG+G +G VYK + S +A K+++ + E E + VE++ + H N+V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII-GTAKALAYLHEAIEPKVV 311
+ ++ E+ G ++ M E++++V+ T AL YLH+ K++
Sbjct: 105 YENNLWILIEFCAGGAVD----AVMLELERPLTESQIQVVCKQTLDALNYLHDN---KII 157
Query: 312 HRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR--VMGTFGYVAPEY-----ANT 364
HRD+K+ NIL + + K++DFG++ I R +GT ++APE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSA---KNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 365 GMLNEKSDIYSFGVLLLEAVTGRDP 389
+ K+D++S G+ L+E P
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 104
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 105 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSG-ESHITTRVMGTFGYV 357
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D ++ TR Y
Sbjct: 161 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYR 212
Query: 358 APEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
APE M N+ DI+S G ++ E +TGR
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 32/249 (12%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 104
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 163
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFG 355
AY+H + HRDIK N+L+D D K+ DFG AK L GE S+I +R
Sbjct: 164 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 215
Query: 356 YVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
Y APE S D++S G +L E + G+ P+ G + LVE +K++ GT
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTR 272
Query: 415 EEV--VDPN 421
E++ ++PN
Sbjct: 273 EQIREMNPN 281
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 26/246 (10%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
AY+H + HRDIK N+L+D D K+ DFG AK L GE +++ + + Y A
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRA 190
Query: 359 PEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV 417
PE S D++S G +L E + G+ P+ G + LVE +K++ GT E++
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTREQI 247
Query: 418 --VDPN 421
++PN
Sbjct: 248 REMNPN 253
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 194 LGEGGYGVVYKGRL------INGSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVR 246
LG G +G VY+G++ + +VAVK L Q E +F +E I H+N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA----YL 302
+G ++ + R ++ E + G+L+ +L R + + M ++ A+ +A YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 303 HEAIEPKVVHRDIKSSNILIDDEFN---AKVSDFGLAK-LLDSGESHITTRVMGTFGYVA 358
E +HRDI + N L+ AK+ DFG+A+ + + M ++
Sbjct: 184 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 359 PEYANTGMLNEKSDIYSFGVLLLE 382
PE G+ K+D +SFGVLL E
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWE 264
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 115/236 (48%), Gaps = 22/236 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVK----KLLNNLGQAEKEFR 230
F I ++R+ + VLG+G +G V+ I G E AVK + + E R
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EV+ + + H N+++L + + + LV E G L + ++ + +
Sbjct: 76 -EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAAR 130
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDD---EFNAKVSDFGLAKLLDSGESHIT 347
+I + Y+H+ K+VHRD+K N+L++ + N ++ DFGL+ ++ S
Sbjct: 131 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKM 185
Query: 348 TRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVE 403
+GT Y+APE + G +EK D++S GV+L ++G P + ANE ++++
Sbjct: 186 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDILK 237
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 26/246 (10%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 88
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 147
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
AY+H + HRDIK N+L+D D K+ DFG AK L GE +++ + + Y A
Sbjct: 148 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRA 202
Query: 359 PEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV 417
PE S D++S G +L E + G+ P+ G + LVE +K++ GT E++
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTREQI 259
Query: 418 --VDPN 421
++PN
Sbjct: 260 REMNPN 265
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 26/246 (10%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
AY+H + HRDIK N+L+D D K+ DFG AK L GE +++ + + Y A
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRA 190
Query: 359 PEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV 417
PE S D++S G +L E + G+ P+ G + LVE +K++ GT E++
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTREQI 247
Query: 418 --VDPN 421
++PN
Sbjct: 248 REMNPN 253
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 26/246 (10%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 77
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 136
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
AY+H + HRDIK N+L+D D K+ DFG AK L GE +++ + + Y A
Sbjct: 137 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRA 191
Query: 359 PEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV 417
PE S D++S G +L E + G+ P+ G + LVE +K++ GT E++
Sbjct: 192 PELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTREQI 248
Query: 418 --VDPN 421
++PN
Sbjct: 249 REMNPN 254
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 119/282 (42%), Gaps = 36/282 (12%)
Query: 174 HWFTLRDLEIATNRFSAENVLGEGGYGVVYK------GRLINGSEVAVKKLLNNLGQA-- 225
W L + N F VLG+GG+G V G++ ++ K++ G+A
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 226 --EKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGN 282
EK+ +V + V L Y E + LV +N G+L+ H Q
Sbjct: 232 LNEKQILEKVNS-------RFVVSLAYAYETKDALCLVLTLMNGGDLK--FHIYHMGQAG 282
Query: 283 LTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSG 342
EAR + A+ L + ++V+RD+K NIL+DD + ++SD GLA + G
Sbjct: 283 FP-EAR--AVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339
Query: 343 ESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLV 402
++ I RV GT GY+APE D ++ G LL E + G+ P + + V
Sbjct: 340 QT-IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397
Query: 403 EWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDP 444
E L V +E P R+L LL C DP
Sbjct: 398 ERLVKEVPEEYSE-------RFSPQARSLCSQLL----CKDP 428
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 119
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ T V+ T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 194 LGEGGYGVVYKGRL-INGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI 252
+GEG G+V + +G VAVKK+ Q + EV + +H+N+V + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
G +V E++ G L + N+ + V + +AL+ LH V+H
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ---GVIH 270
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RDIKS +IL+ + K+SDFG + S E ++GT ++APE + + D
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 329
Query: 373 IYSFGVLLLEAVTGRDP 389
I+S G++++E V G P
Sbjct: 330 IWSLGIMVIEMVDGEPP 346
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSEV----AVKKLLNNLGQAEKEFRVEVEAIGHVRHKN 243
F V+G G Y V RL + VKK L N + + E +
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 244 LVRLLGYCIEGVHRML-VYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYL 302
+ L C + R+ V EYVN G+L H M+ Q L E + AL YL
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDL--MFH--MQRQRKLPEEHARFYSAEISLALNYL 169
Query: 303 HEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL-LDSGESHITTRVMGTFGYVAPEY 361
HE +++RD+K N+L+D E + K++D+G+ K L G++ T+ GT Y+APE
Sbjct: 170 HER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPEI 224
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
D ++ GVL+ E + GR P D
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 26/246 (10%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
AY+H + HRDIK N+L+D D K+ DFG AK L GE +++ + + Y A
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRA 190
Query: 359 PEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV 417
PE S D++S G +L E + G+ P+ G + LVE +K++ GT E++
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTREQI 247
Query: 418 --VDPN 421
++PN
Sbjct: 248 REMNPN 253
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 120
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ T V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 26/246 (10%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 95
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 154
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
AY+H + HRDIK N+L+D D K+ DFG AK L GE +++ + + Y A
Sbjct: 155 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRA 209
Query: 359 PEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV 417
PE S D++S G +L E + G+ P+ G + LVE +K++ GT E++
Sbjct: 210 PELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTREQI 266
Query: 418 --VDPN 421
++PN
Sbjct: 267 REMNPN 272
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 119
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ T V+ T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 101
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 102 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGLA+ D + T Y A
Sbjct: 158 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGXVATRWYRA 210
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 26/246 (10%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 110
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 169
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
AY+H + HRDIK N+L+D D K+ DFG AK L GE +++ + + Y A
Sbjct: 170 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRA 224
Query: 359 PEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV 417
PE S D++S G +L E + G+ P+ G + LVE +K++ GT E++
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTREQI 281
Query: 418 --VDPN 421
++PN
Sbjct: 282 REMNPN 287
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 48/306 (15%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGR---LINGSE---VAVKKLLNNLGQAEKE-FRVEVE 234
E NR S LG G +G V + LI VAVK L + E+E E++
Sbjct: 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78
Query: 235 AIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ ++ H N+V LLG C G +++ EY G+L +L R + + I+
Sbjct: 79 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR---RKRDSFICSKTSPAIM 135
Query: 294 G-----------------TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA 336
AK +A+L +HRD+ + NIL+ K+ DFGLA
Sbjct: 136 EDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLA 192
Query: 337 KLLDSGESHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGR 394
+ + + +++ ++APE + +SD++S+G+ L E + G P G
Sbjct: 193 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-GM 251
Query: 395 PANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQ 454
P + ++ KM+ + ++ P E PA + C D D KRP Q
Sbjct: 252 PVDS----KFYKMI---KEGFRMLSP--EHAPA-----EMYDIMKTCWDADPLKRPTFKQ 297
Query: 455 VVRMLE 460
+V+++E
Sbjct: 298 IVQLIE 303
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 32/249 (12%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 112
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 171
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFG 355
AY+H + HRDIK N+L+D D K+ DFG AK L GE S+I +R
Sbjct: 172 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 223
Query: 356 YVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
Y APE S D++S G +L E + G+ P+ G + LVE +K++ GT
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTR 280
Query: 415 EEV--VDPN 421
E++ ++PN
Sbjct: 281 EQIREMNPN 289
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 22/221 (9%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNN----LGQAEKEFRVEVEA 235
++ + N FS ++G GG+G VY R + ++ K L+ + Q E E
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 241
Query: 236 IGHVRHKN--LVRLLGYCIEGVHRM-LVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMK 290
+ V + + + Y ++ + + +N G+L L HG ++ ++ + A +
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEADMRFYA-AE 299
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
+I+G L ++H VV+RD+K +NIL+D+ + ++SD GLA + H +
Sbjct: 300 IILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--- 349
Query: 351 MGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPV 390
+GT GY+APE G+ + S D +S G +L + + G P
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 121
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ T V+ T Y APE
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 177
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 178 GCKYYSTAV-----DIWSLGCIFAEMVTRR 202
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 30/248 (12%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
++ V+G G +GVVY+ +L + E VA+KK+L G+A K E++ + + H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--GKAFKN--RELQIMRKLDHCNIVR 77
Query: 247 LLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
L + V+ LV +YV H + Q ++ + ++LA
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 301 YLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFGY 356
Y+H + HRDIK N+L+D D K+ DFG AK L GE S+I +R Y
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 188
Query: 357 VAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAE 415
APE S D++S G +L E + G+ P+ G + LVE +K++ GT E
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTRE 245
Query: 416 EV--VDPN 421
++ ++PN
Sbjct: 246 QIREMNPN 253
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 32/249 (12%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 89
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 148
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFG 355
AY+H + HRDIK N+L+D D K+ DFG AK L GE S+I +R
Sbjct: 149 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 200
Query: 356 YVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
Y APE S D++S G +L E + G+ P+ G + LVE +K++ GT
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTR 257
Query: 415 EEV--VDPN 421
E++ ++PN
Sbjct: 258 EQIREMNPN 266
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 32/249 (12%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFG 355
AY+H + HRDIK N+L+D D K+ DFG AK L GE S+I +R
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 187
Query: 356 YVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
Y APE S D++S G +L E + G+ P+ G + LVE +K++ GT
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTR 244
Query: 415 EEV--VDPN 421
E++ ++PN
Sbjct: 245 EQIREMNPN 253
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 70
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 127
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ T V+ T Y APE
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 184 GCKYYSTAV-----DIWSLGCIFAEMVTRR 208
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 26/246 (10%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 84
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 143
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
AY+H + HRDIK N+L+D D K+ DFG AK L GE +++ + + Y A
Sbjct: 144 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRA 198
Query: 359 PEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV 417
PE S D++S G +L E + G+ P+ G + LVE +K++ GT E++
Sbjct: 199 PELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTREQI 255
Query: 418 --VDPN 421
++PN
Sbjct: 256 REMNPN 261
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 120
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ T V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 177 GXKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 32/249 (12%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 114
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 173
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFG 355
AY+H + HRDIK N+L+D D K+ DFG AK L GE S+I +R
Sbjct: 174 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 225
Query: 356 YVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
Y APE S D++S G +L E + G+ P+ G + LVE +K++ GT
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTR 282
Query: 415 EEV--VDPN 421
E++ ++PN
Sbjct: 283 EQIREMNPN 291
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DFGL + D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 48/306 (15%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGR---LINGSE---VAVKKLLNNLGQAEKE-FRVEVE 234
E NR S LG G +G V + LI VAVK L + E+E E++
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 235 AIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ ++ H N+V LLG C G +++ EY G+L +L R + + I+
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR---RKRDSFICSKTSPAIM 158
Query: 294 G-----------------TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA 336
AK +A+L +HRD+ + NIL+ K+ DFGLA
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLA 215
Query: 337 KLLDSGESHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGR 394
+ + + +++ ++APE + +SD++S+G+ L E + G P G
Sbjct: 216 RHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-GM 274
Query: 395 PANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQ 454
P + ++ KM+ + ++ P E PA + C D D KRP Q
Sbjct: 275 PVDS----KFYKMI---KEGFRMLSP--EHAPA-----EMYDIMKTCWDADPLKRPTFKQ 320
Query: 455 VVRMLE 460
+V+++E
Sbjct: 321 IVQLIE 326
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKGRLIN----GSEVAVKKLLNNLGQAEKE-FRVEV 233
RD EI R +GEG +G V++G ++ VA+K N + +E F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ H ++V+L+G E ++ E G L +L + +L + +
Sbjct: 63 LTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKFSLDLASLILYAY 118
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT 353
+ ALAYL + VHRDI + N+L+ K+ DFGL++ ++ + ++
Sbjct: 119 QLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 354 FGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
++APE N SD++ FGV + E
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 70
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 127
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ T V+ T Y APE
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 184 GXKYYSTAV-----DIWSLGCIFAEMVTRR 208
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 119/282 (42%), Gaps = 36/282 (12%)
Query: 174 HWFTLRDLEIATNRFSAENVLGEGGYGVVYK------GRLINGSEVAVKKLLNNLGQA-- 225
W L + N F VLG+GG+G V G++ ++ K++ G+A
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 226 --EKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGN 282
EK+ +V + V L Y E + LV +N G+L+ H Q
Sbjct: 232 LNEKQILEKVNS-------RFVVSLAYAYETKDALCLVLTLMNGGDLK--FHIYHMGQAG 282
Query: 283 LTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSG 342
EAR + A+ L + ++V+RD+K NIL+DD + ++SD GLA + G
Sbjct: 283 FP-EAR--AVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339
Query: 343 ESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLV 402
++ I RV GT GY+APE D ++ G LL E + G+ P + + V
Sbjct: 340 QT-IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397
Query: 403 EWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDP 444
E L V +E P R+L LL C DP
Sbjct: 398 ERLVKEVPEEYSE-------RFSPQARSLCSQLL----CKDP 428
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE-FRVEV 233
RD EI R +GEG +G V++G ++ VA+K N + +E F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ H ++V+L+G E ++ E G L +L + +L + +
Sbjct: 63 LTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKYSLDLASLILYAY 118
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT 353
+ ALAYL + VHRDI + N+L+ K+ DFGL++ ++ + ++
Sbjct: 119 QLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 354 FGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
++APE N SD++ FGV + E
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 30/248 (12%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
++ V+G G +GVVY+ +L + E VA+KK+L G+A K E++ + + H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--GKAFKN--RELQIMRKLDHCNIVR 77
Query: 247 LLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
L + V+ LV +YV H + Q ++ + ++LA
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 301 YLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFGY 356
Y+H + HRDIK N+L+D D K+ DFG AK L GE S+I +R Y
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 188
Query: 357 VAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAE 415
APE S D++S G +L E + G+ P+ G + LVE +K++ GT E
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTRE 245
Query: 416 EV--VDPN 421
++ ++PN
Sbjct: 246 QIREMNPN 253
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 22/221 (9%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNN----LGQAEKEFRVEVEA 235
++ + N FS ++G GG+G VY R + ++ K L+ + Q E E
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 236 IGHVRHKN--LVRLLGYCIEGVHRM-LVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMK 290
+ V + + + Y ++ + + +N G+L L HG ++ ++ + A +
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEADMRFYA-AE 300
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
+I+G L ++H VV+RD+K +NIL+D+ + ++SD GLA + H +
Sbjct: 301 IILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--- 350
Query: 351 MGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPV 390
+GT GY+APE G+ + S D +S G +L + + G P
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 26/246 (10%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 88
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 147
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
AY+H + HRDIK N+L+D D K+ DFG AK L GE +++ + + Y A
Sbjct: 148 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRA 202
Query: 359 PEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV 417
PE S D++S G +L E + G+ P+ G + LVE +K++ GT E++
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTREQI 259
Query: 418 --VDPN 421
++PN
Sbjct: 260 REMNPN 265
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 120
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ T V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 194 LGEGGYGVVYKGRL------INGSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVR 246
LG G +G VY+G++ + +VAVK L Q E +F +E I H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+G ++ + R ++ E + G+L+ +L R + + M ++ A+ +A + +
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 307 EPK-VVHRDIKSSNILIDDEFN---AKVSDFGLAK-LLDSGESHITTRVMGTFGYVAPEY 361
E +HRDI + N L+ AK+ DFG+A+ + + M ++ PE
Sbjct: 172 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 231
Query: 362 ANTGMLNEKSDIYSFGVLLLE 382
G+ K+D +SFGVLL E
Sbjct: 232 FMEGIFTSKTDTWSFGVLLWE 252
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 22/220 (10%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNN----LGQAEKEFRVEVEA 235
++ + N FS ++G GG+G VY R + ++ K L+ + Q E E
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 236 IGHVRHKN--LVRLLGYCIEGVHRM-LVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMK 290
+ V + + + Y ++ + + +N G+L L HG ++ ++ + A +
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEADMRFYA-AE 300
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
+I+G L ++H VV+RD+K +NIL+D+ + ++SD GLA + H +
Sbjct: 301 IILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--- 350
Query: 351 MGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDP 389
+GT GY+APE G+ + S D +S G +L + + G P
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 22/220 (10%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNN----LGQAEKEFRVEVEA 235
++ + N FS ++G GG+G VY R + ++ K L+ + Q E E
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 236 IGHVRHKN--LVRLLGYCIEGVHRM-LVYEYVNNGNLEQWL--HGAMRNQGNLTWEARMK 290
+ V + + + Y ++ + + +N G+L L HG ++ ++ + A +
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEADMRFYA-AE 300
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV 350
+I+G L ++H VV+RD+K +NIL+D+ + ++SD GLA + H +
Sbjct: 301 IILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--- 350
Query: 351 MGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDP 389
+GT GY+APE G+ + S D +S G +L + + G P
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 32/249 (12%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 155
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 214
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFG 355
AY+H + HRDIK N+L+D D K+ DFG AK L GE S+I +R
Sbjct: 215 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 266
Query: 356 YVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
Y APE S D++S G +L E + G+ P+ G + LVE +K++ GT
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTR 323
Query: 415 EEV--VDPN 421
E++ ++PN
Sbjct: 324 EQIREMNPN 332
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+V+ +L+ ++ + + + + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 119
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ T V+ T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 194 LGEGGYGVVYKGRL-INGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI 252
+GEG G+V + +G VAVKK+ Q + EV + +H+N+V + +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
G +V E++ G L + N+ + V + +AL+ LH V+H
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ---GVIH 148
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RDIKS +IL+ + K+SDFG + S E ++GT ++APE + + D
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 207
Query: 373 IYSFGVLLLEAVTGRDP 389
I+S G++++E V G P
Sbjct: 208 IWSLGIMVIEMVDGEPP 224
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 32/249 (12%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 81
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 140
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGE---SHITTRVMGTFG 355
AY+H + HRDIK N+L+D D K+ DFG AK L GE S+I +R
Sbjct: 141 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 192
Query: 356 YVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
Y APE S D++S G +L E + G+ P+ G + LVE +K++ GT
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTR 249
Query: 415 EEV--VDPN 421
E++ ++PN
Sbjct: 250 EQIREMNPN 258
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE-FRVEV 233
RD EI R +GEG +G V++G ++ VA+K N + +E F E
Sbjct: 8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 67
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ H ++V+L+G E ++ E G L +L + +L + +
Sbjct: 68 LTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAY 123
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT 353
+ ALAYL + VHRDI + N+L+ K+ DFGL++ ++ + ++
Sbjct: 124 QLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 180
Query: 354 FGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
++APE N SD++ FGV + E
Sbjct: 181 IKWMAPESINFRRFTSASDVWMFGVCMWE 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE-FRVEV 233
RD EI R +GEG +G V++G ++ VA+K N + +E F E
Sbjct: 5 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 64
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ H ++V+L+G E ++ E G L +L + +L + +
Sbjct: 65 LTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAY 120
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT 353
+ ALAYL + VHRDI + N+L+ K+ DFGL++ ++ + ++
Sbjct: 121 QLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 177
Query: 354 FGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
++APE N SD++ FGV + E
Sbjct: 178 IKWMAPESINFRRFTSASDVWMFGVCMWE 206
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 48/306 (15%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGR---LINGSE---VAVKKLLNNLGQAEKE-FRVEVE 234
E NR S LG G +G V + LI VAVK L + E+E E++
Sbjct: 37 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 96
Query: 235 AIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ ++ H N+V LLG C G +++ EY G+L +L R + + I+
Sbjct: 97 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR---RKRDSFICSKTSPAIM 153
Query: 294 G-----------------TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA 336
AK +A+L +HRD+ + NIL+ K+ DFGLA
Sbjct: 154 EDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLA 210
Query: 337 KLLDSGESHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGR 394
+ + + +++ ++APE + +SD++S+G+ L E + G P G
Sbjct: 211 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-GM 269
Query: 395 PANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQ 454
P + ++ KM+ + ++ P E PA + C D D KRP Q
Sbjct: 270 PVDS----KFYKMI---KEGFRMLSP--EHAPA-----EMYDIMKTCWDADPLKRPTFKQ 315
Query: 455 VVRMLE 460
+V+++E
Sbjct: 316 IVQLIE 321
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE-FRVEV 233
RD EI R +GEG +G V++G ++ VA+K N + +E F E
Sbjct: 6 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 65
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ H ++V+L+G E ++ E G L +L + +L + +
Sbjct: 66 LTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAY 121
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT 353
+ ALAYL + VHRDI + N+L+ K+ DFGL++ ++ + ++
Sbjct: 122 QLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 178
Query: 354 FGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
++APE N SD++ FGV + E
Sbjct: 179 IKWMAPESINFRRFTSASDVWMFGVCMWE 207
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 184 ATNRFSAEN-----VLGEGGYGVVYKGRLI-NGSEVAVKKLLNNLGQAEKEFRV---EVE 234
++NR +N VLG+G +G V R+ G AVK L ++ + + E
Sbjct: 16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKR 75
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRML-VYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ R+ + L C + R+ V E+VN G+L + + R EAR +
Sbjct: 76 ILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD-----EARARFYA 130
Query: 294 G-TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVM- 351
AL +LH+ +++RD+K N+L+D E + K++DFG+ K + + +TT
Sbjct: 131 AEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFC 185
Query: 352 GTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGT 411
GT Y+APE + D ++ GVLL E + G P + NE +L E +
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE---AENEDDLFEAI------ 236
Query: 412 RRAEEVVDPNLEVKPATRALK 432
+EVV P + AT LK
Sbjct: 237 -LNDEVVYPTWLHEDATGILK 256
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 22/236 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVK----KLLNNLGQAEKEFR 230
F I ++R+ + VLG+G +G V+ I G E AVK + + E R
Sbjct: 39 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 98
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EV+ + + H N+++L + + + LV E G L + R + +
Sbjct: 99 -EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAAR 153
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDD---EFNAKVSDFGLAKLLDSGESHIT 347
+I + Y+H+ K+VHRD+K N+L++ + N ++ DFGL+ ++ S
Sbjct: 154 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKM 208
Query: 348 TRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVE 403
+GT Y+APE + G +EK D++S GV+L ++G P + ANE ++++
Sbjct: 209 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDILK 260
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 26/246 (10%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLV 245
++ V+G G +GVVY+ +L + E VA+KK+L +K F+ E++ + + H N+V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 80
Query: 246 RLLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
RL + V+ LV +YV H + Q ++ + ++L
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 139
Query: 300 AYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
AY+H + HRDIK N+L+D D K+ DFG AK L GE +++ + + Y A
Sbjct: 140 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRA 194
Query: 359 PEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV 417
PE S D++S G +L E + G+ P+ G + LVE +K++ GT E++
Sbjct: 195 PELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTREQI 251
Query: 418 --VDPN 421
++PN
Sbjct: 252 REMNPN 257
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 12/209 (5%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKGRLIN----GSEVAVKKLLNNLGQAEKE-FRVEV 233
RD EI R +GEG +G V++G ++ VA+K N + +E F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ H ++V+L+G E ++ E G L +L + +L + +
Sbjct: 63 LTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKFSLDLASLILYAY 118
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT 353
+ ALAYL + VHRDI + N+L+ K+ DFGL++ ++ ++
Sbjct: 119 QLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLP 175
Query: 354 FGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
++APE N SD++ FGV + E
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 43/301 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQAE-KEFRVEVE 234
E +R LG G +G V + + VAVK L +E + E++
Sbjct: 25 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 84
Query: 235 AIGHV-RHKNLVRLLGYCIE-GVHRMLVYEYVNNGNLEQWLHGAMRNQ-----------G 281
+ H+ H N+V LLG C + G M++ E+ GNL +L + RN+
Sbjct: 85 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKPEDLYKD 143
Query: 282 NLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDS 341
LT E + AK + +L K +HRD+ + NIL+ ++ K+ DFGLA+ +
Sbjct: 144 FLTLEHLIXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 342 GESHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEV 399
+ ++APE + +SD++SFGVLL E + G P P ++
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKI 256
Query: 400 NLVEWLKMMVGTR-RAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRM 458
+ ++ GTR RA + P + L C + +RP S++V
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRPTFSELVEH 304
Query: 459 L 459
L
Sbjct: 305 L 305
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 194 LGEGGYGVVYKGRL-INGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI 252
+GEG G+V + +G VAVKK+ Q + EV + +H+N+V + +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
G +V E++ G L + N+ + V + +AL+ LH V+H
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ---GVIH 150
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RDIKS +IL+ + K+SDFG + S E ++GT ++APE + + D
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 209
Query: 373 IYSFGVLLLEAVTGRDP 389
I+S G++++E V G P
Sbjct: 210 IWSLGIMVIEMVDGEPP 226
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 128/302 (42%), Gaps = 44/302 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQAE-KEFRVEVE 234
E +R + LG G +G V + + VAVK L +E + E++
Sbjct: 24 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 83
Query: 235 AIGHV-RHKNLVRLLGYCIE-GVHRMLVYEYVNNGNLEQWLHGAMRNQ------------ 280
+ H+ H N+V LLG C + G M++ E+ GNL +L + RN+
Sbjct: 84 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKTPEDLYK 142
Query: 281 GNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLD 340
LT E + AK + +L K +HRD+ + NIL+ ++ K+ DFGLA+ +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIX 199
Query: 341 SGESHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANE 398
+ ++APE + +SD++SFGVLL E + G P P +
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVK 255
Query: 399 VNLVEWLKMMVGTR-RAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVR 457
++ ++ GTR RA + P + L C + +RP S++V
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRPTFSELVE 303
Query: 458 ML 459
L
Sbjct: 304 HL 305
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 32/274 (11%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVK--KLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYC 251
L E G ++KGR G+++ VK K+ + + ++F E + H N++ +LG C
Sbjct: 18 LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 252 --IEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
H L+ ++ G+L LH + + +K + A+ +A+LH +EP
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQS--QAVKFALDMARGMAFLH-TLEPL 133
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGM--L 367
+ + S +++ID++ A++S + D S + M +VAPE
Sbjct: 134 IPRHALNSRSVMIDEDMTARIS------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDT 187
Query: 368 NEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPNLEVKP 426
N +S D++SF VLL E VT EV + M +G + A E + P + P
Sbjct: 188 NRRSADMWSFAVLLWELVT-----------REVPFADLSNMEIGMKVALEGLRPTI---P 233
Query: 427 ATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
+ S L+ + C++ D KRPK +V +LE
Sbjct: 234 PGISPHVSKLMKI-CMNEDPAKRPKFDMIVPILE 266
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 172 WGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQA 225
W +RD+ + +VLG G + V +L+ +A + L G
Sbjct: 10 WKQAEDIRDI------YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM 63
Query: 226 EKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTW 285
E E V + ++H N+V L G H L+ + V+ G L + +G T
Sbjct: 64 ENEIAV----LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTE 115
Query: 286 EARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNIL---IDDEFNAKVSDFGLAKLLDSG 342
++I A+ YLH+ +VHRD+K N+L +D++ +SDFGL+K+ D G
Sbjct: 116 RDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
Query: 343 ESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
+ + GT GYVAPE ++ D +S GV+ + G P
Sbjct: 173 S--VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 48/306 (15%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGR---LINGSE---VAVKKLLNNLGQAEKE-FRVEVE 234
E NR S LG G +G V + LI VAVK L + E+E E++
Sbjct: 35 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 94
Query: 235 AIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ ++ H N+V LLG C G +++ EY G+L +L R + + I+
Sbjct: 95 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR---RKRDSFICSKTSPAIM 151
Query: 294 G-----------------TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA 336
AK +A+L +HRD+ + NIL+ K+ DFGLA
Sbjct: 152 EDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLA 208
Query: 337 KLLDSGESHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGR 394
+ + + +++ ++APE + +SD++S+G+ L E + G P G
Sbjct: 209 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-GM 267
Query: 395 PANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQ 454
P + ++ KM+ + ++ P E PA + C D D KRP Q
Sbjct: 268 PVDS----KFYKMI---KEGFRMLSP--EHAPA-----EMYDIMKTCWDADPLKRPTFKQ 313
Query: 455 VVRMLE 460
+V+++E
Sbjct: 314 IVQLIE 319
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 22/236 (9%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVK----KLLNNLGQAEKEFR 230
F I ++R+ + VLG+G +G V+ I G E AVK + + E R
Sbjct: 40 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 99
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EV+ + + H N+++L + + + LV E G L + R + +
Sbjct: 100 -EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAAR 154
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDD---EFNAKVSDFGLAKLLDSGESHIT 347
+I + Y+H+ K+VHRD+K N+L++ + N ++ DFGL+ ++ S
Sbjct: 155 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKM 209
Query: 348 TRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVE 403
+GT Y+APE + G +EK D++S GV+L ++G P + ANE ++++
Sbjct: 210 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDILK 261
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 48/306 (15%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGR---LINGSE---VAVKKLLNNLGQAEKE-FRVEVE 234
E NR S LG G +G V + LI VAVK L + E+E E++
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 235 AIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ ++ H N+V LLG C G +++ EY G+L +L R + + I+
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR---RKRDSFICSKTSPAIM 158
Query: 294 G-----------------TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA 336
AK +A+L +HRD+ + NIL+ K+ DFGLA
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLA 215
Query: 337 KLLDSGESHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGR 394
+ + + +++ ++APE + +SD++S+G+ L E + G P G
Sbjct: 216 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-GM 274
Query: 395 PANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQ 454
P + ++ KM+ + ++ P E PA + C D D KRP Q
Sbjct: 275 PVDS----KFYKMI---KEGFRMLSP--EHAPA-----EMYDIMKTCWDADPLKRPTFKQ 320
Query: 455 VVRMLE 460
+V+++E
Sbjct: 321 IVQLIE 326
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 35/231 (15%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLVRLLGYCI 252
+G+G YG V+ G+ G +VAVK + FR E+ +RH+N++ + I
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTT--EEASWFRETEIYQTVLMRHENILGFIAADI 101
Query: 253 EGV----HRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI-- 306
+G L+ +Y NG+L +L L ++ +K+ + L +LH I
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 307 ---EPKVVHRDIKSSNILIDDEFNAKVSDFGLAK--LLDSGESHI--TTRVMGTFGYVAP 359
+P + HRD+KS NIL+ ++D GLA + D+ E I TRV GT Y+ P
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPP 215
Query: 360 EYANTGMLNEK-------SDIYSFGVLLLE----AVTGRDPVDYGRPANEV 399
E + LN +D+YSFG++L E V+G +Y P +++
Sbjct: 216 EVLDES-LNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 24/245 (9%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE-VAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVR 246
++ V+G G +GVVY+ +L + E VA+KK+L G+A K E++ + + H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--GKAFKN--RELQIMRKLDHCNIVR 77
Query: 247 LLGYCIEG------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
L + V+ LV +YV H + Q ++ + ++LA
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 301 YLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAP 359
Y+H + HRDIK N+L+D D K+ DFG AK L GE +++ + + Y AP
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAP 191
Query: 360 EYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV- 417
E S D++S G +L E + G+ P+ G + LVE +K++ GT E++
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVD-QLVEIIKVL-GTPTREQIR 248
Query: 418 -VDPN 421
++PN
Sbjct: 249 EMNPN 253
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE-FRVEV 233
RD EI R +GEG +G V++G ++ VA+K N + +E F E
Sbjct: 31 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 90
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ H ++V+L+G E ++ E G L +L + +L + +
Sbjct: 91 LTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAY 146
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT 353
+ ALAYL + VHRDI + N+L+ K+ DFGL++ ++ + ++
Sbjct: 147 QLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 203
Query: 354 FGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
++APE N SD++ FGV + E
Sbjct: 204 IKWMAPESINFRRFTSASDVWMFGVCMWE 232
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGRL-INGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 145
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H + T Y APE
Sbjct: 146 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 202
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 203 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 235
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 20/218 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGRL-INGSEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKN 243
R++ + +GEG YG+V +N VA+KK+ + ++ R E++ + RH+N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 87
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ + + Y+ +E L+ ++ Q +L+ + + + L Y+H
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 146
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEY 361
A V+HRD+K SN+L++ + K+ DFGLA++ D H + T Y APE
Sbjct: 147 SA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 203
Query: 362 ANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYGR 394
MLN K DI+S G +L E ++ R P+ G+
Sbjct: 204 ----MLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 128/303 (42%), Gaps = 45/303 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQAE-KEFRVEVE 234
E +R LG G +G V + + VAVK L +E + E++
Sbjct: 25 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 84
Query: 235 AIGHV-RHKNLVRLLGYCIE-GVHRMLVYEYVNNGNLEQWLHGAMRNQ------------ 280
+ H+ H N+V LLG C + G M++ E+ GNL +L + RN+
Sbjct: 85 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKEAPEDLY 143
Query: 281 -GNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL 339
LT E + AK + +L K +HRD+ + NIL+ ++ K+ DFGLA+ +
Sbjct: 144 KDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI 200
Query: 340 DSGESHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPAN 397
++ ++APE + +SD++SFGVLL E + G P P
Sbjct: 201 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGV 256
Query: 398 EVNLVEWLKMMVGTR-RAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
+++ ++ GTR RA + P + L C + +RP S++V
Sbjct: 257 KIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 304
Query: 457 RML 459
L
Sbjct: 305 EHL 307
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ DF LA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 131/304 (43%), Gaps = 35/304 (11%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLIN-GSE-----VAVKKLLNNLGQAEKE-FRVEVE 234
E N LG G +G V + G E VAVK L + EKE E++
Sbjct: 34 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 93
Query: 235 AIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWL----HGAMRNQGNLTWEAR- 288
+ H+ +H+N+V LLG C G +++ EY G+L +L + + E R
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 153
Query: 289 -MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHIT 347
+ A+ +A+L +HRD+ + N+L+ + AK+ DFGLA+ + + ++I
Sbjct: 154 LLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 210
Query: 348 T-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLK 406
++APE + +SD++S+G+LL E + + L +
Sbjct: 211 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-------------LGLNPYPG 257
Query: 407 MMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEADDYPF 466
++V ++ + V D +PA A K + C + RP Q+ L+
Sbjct: 258 ILVNSKFYKLVKDGYQMAQPAF-APKNIYSIMQACWALEPTHRPTFQQICSFLQEQA--- 313
Query: 467 REDR 470
+EDR
Sbjct: 314 QEDR 317
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 194 LGEGGYGVVYKGRL------INGSEVAVKKLLNNLG-QAEKEFRVEVEAIGHVRHKNLVR 246
LG G +G VY+G++ + +VAVK L Q E +F +E I H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+G ++ + R ++ E + G+L+ +L R + + M ++ A+ +A + +
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 307 EPK-VVHRDIKSSNILIDDEFN---AKVSDFGLAK-LLDSGESHITTRVMGTFGYVAPEY 361
E +HRDI + N L+ AK+ DFG+A+ + + M ++ PE
Sbjct: 172 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 231
Query: 362 ANTGMLNEKSDIYSFGVLLLE 382
G+ K+D +SFGVLL E
Sbjct: 232 FMEGIFTSKTDTWSFGVLLWE 252
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 128/303 (42%), Gaps = 45/303 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQAE-KEFRVEVE 234
E +R LG G +G V + + VAVK L +E + E++
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 235 AIGHV-RHKNLVRLLGYCIE-GVHRMLVYEYVNNGNLEQWLHGAMRNQ------------ 280
+ H+ H N+V LLG C + G M++ E+ GNL +L + RN+
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLY 132
Query: 281 -GNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL 339
LT E + AK + +L K +HRD+ + NIL+ ++ K+ DFGLA+ +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 340 DSGESHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPAN 397
++ ++APE + +SD++SFGVLL E + G P P
Sbjct: 190 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGV 245
Query: 398 EVNLVEWLKMMVGTR-RAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
+++ ++ GTR RA + P + L C + +RP S++V
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 293
Query: 457 RML 459
L
Sbjct: 294 EHL 296
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSEV-AVKKLLNNLGQAEKEFR---VEVEAIGHVRHKN 243
F+ VLG+G +G V E+ A+K L ++ + + VE + +
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 244 LVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLH--GAMRNQGNLTWEARMKVIIGTAKALA 300
+ L C + V R+ V EYVN G+L + G + + + A + + L
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI------GLF 134
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK--LLDSGESHITTR-VMGTFGYV 357
+LH+ +++RD+K N+++D E + K++DFG+ K ++D +TTR GT Y+
Sbjct: 135 FLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG----VTTREFCGTPDYI 187
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
APE + D +++GVLL E + G+ P D
Sbjct: 188 APEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---G 124
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 128/303 (42%), Gaps = 45/303 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQAE-KEFRVEVE 234
E +R LG G +G V + + VAVK L +E + E++
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 82
Query: 235 AIGHV-RHKNLVRLLGYCIE-GVHRMLVYEYVNNGNLEQWLHGAMRNQ------------ 280
+ H+ H N+V LLG C + G M++ E+ GNL +L + RN+
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLY 141
Query: 281 -GNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL 339
LT E + AK + +L K +HRD+ + NIL+ ++ K+ DFGLA+ +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 340 DSGESHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPAN 397
++ ++APE + +SD++SFGVLL E + G P P
Sbjct: 199 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGV 254
Query: 398 EVNLVEWLKMMVGTR-RAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
+++ ++ GTR RA + P + L C + +RP S++V
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 302
Query: 457 RML 459
L
Sbjct: 303 EHL 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 172 WGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQA 225
W +RD+ + +VLG G + V +L+ +A + L G
Sbjct: 10 WKQAEDIRDI------YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM 63
Query: 226 EKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTW 285
E E V + ++H N+V L G H L+ + V+ G L + +G T
Sbjct: 64 ENEIAV----LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTE 115
Query: 286 EARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNIL---IDDEFNAKVSDFGLAKLLDSG 342
++I A+ YLH+ +VHRD+K N+L +D++ +SDFGL+K+ D G
Sbjct: 116 RDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
Query: 343 ESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
+ + GT GYVAPE ++ D +S GV+ + G P
Sbjct: 173 S--VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 194 LGEGGYGVVYKGRL-INGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI 252
+GEG G+V + +G VAVKK+ Q + EV + +H+N+V + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
G +V E++ G L + N+ + V + +AL+ LH V+H
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ---GVIH 139
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RDIKS +IL+ + K+SDFG + S E ++GT ++APE + + D
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 198
Query: 373 IYSFGVLLLEAVTGRDP 389
I+S G++++E V G P
Sbjct: 199 IWSLGIMVIEMVDGEPP 215
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 188 FSAENV-----LGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQAE-KEFRVEVEAIGHVR 240
F+AE++ +G G YG V K +G +AVK++ + + + E K+ ++++ +
Sbjct: 19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSS 78
Query: 241 H-KNLVRLLGYCIEGVHRMLVYEYVNNG--NLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
+V+ G + E ++ ++++ + + + E K+ + T K
Sbjct: 79 DCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDV--IPEEILGKITLATVK 136
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGY 356
AL +L E + K++HRDIK SNIL+D N K+ DFG++ +L+DS TR G Y
Sbjct: 137 ALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK---TRDAGCRPY 191
Query: 357 VAPEYANTGMLNE----KSDIYSFGVLLLEAVTGRDP 389
+APE + + +SD++S G+ L E TGR P
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 128/303 (42%), Gaps = 45/303 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQAE-KEFRVEVE 234
E +R LG G +G V + + VAVK L +E + E++
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 235 AIGHV-RHKNLVRLLGYCIE-GVHRMLVYEYVNNGNLEQWLHGAMRNQ------------ 280
+ H+ H N+V LLG C + G M++ E+ GNL +L + RN+
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLY 132
Query: 281 -GNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL 339
LT E + AK + +L K +HRD+ + NIL+ ++ K+ DFGLA+ +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 340 DSGESHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPAN 397
++ ++APE + +SD++SFGVLL E + G P P
Sbjct: 190 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGV 245
Query: 398 EVNLVEWLKMMVGTR-RAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
+++ ++ GTR RA + P + L C + +RP S++V
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 293
Query: 457 RML 459
L
Sbjct: 294 EHL 296
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 172 WGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQA 225
W +RD+ + +VLG G + V +L+ +A + L G
Sbjct: 10 WKQAEDIRDI------YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM 63
Query: 226 EKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTW 285
E E V + ++H N+V L G H L+ + V+ G L + +G T
Sbjct: 64 ENEIAV----LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTE 115
Query: 286 EARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNIL---IDDEFNAKVSDFGLAKLLDSG 342
++I A+ YLH+ +VHRD+K N+L +D++ +SDFGL+K+ D G
Sbjct: 116 RDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
Query: 343 ESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
+ + GT GYVAPE ++ D +S GV+ + G P
Sbjct: 173 S--VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSEVAVKKLLN--NLGQAEKEFRVEVEAIGHVRHKNLV 245
F+ + +G+G +G VYKG + EV K+++ ++ + E+ + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 246 RLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
R G ++ ++ EY+ G+ L G L ++ K L YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLHSE 135
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTG 365
+ +HRDIK++N+L+ ++ + K++DFG+A L + +GT ++APE
Sbjct: 136 ---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQS 191
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDP 389
+ K+DI+S G+ +E G P
Sbjct: 192 AYDFKADIWSLGITAIELAKGEPP 215
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + + YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---G 124
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 194 LGEGGYGVVYKGRLIN-GSEVAVKKLLNNLGQA--EKEFRVEVEAIGHVRHKNLVRLLGY 250
+GEG YGVV+K R + G VA+KK L + +K E+ + ++H NLV LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 251 CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKV 310
LV+EY ++ L H R Q + + T +A+ + H+
Sbjct: 71 FRRKRRLHLVFEYCDHTVL----HELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NC 123
Query: 311 VHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNE 369
+HRD+K NILI K+ DFG A+LL +G S + T Y +PE
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVATRWYRSPELLVGDTQYGP 182
Query: 370 KSDIYSFGVLLLEAVTG 386
D+++ G + E ++G
Sbjct: 183 PVDVWAIGCVFAELLSG 199
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 22/265 (8%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVR-HKNLVRLLGYCI 252
LGEG + + K ++ K+++ + E + E+ A+ H N+V+L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISK--RMEANTQKEITALKLCEGHPNIVKLHEVFH 76
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
+ +H LV E +N G L + ++ + + + ++ A++++H+ VVH
Sbjct: 77 DQLHTFLVMELLNGGELFE----RIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVH 129
Query: 313 RDIKSSNILIDDE---FNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNE 369
RD+K N+L DE K+ DFG A+L + T T Y APE N +E
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDE 188
Query: 370 KSDIYSFGVLLLEAVTGRDPVD-YGRPANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPAT 428
D++S GV+L ++G+ P + R + VE +K + + E E
Sbjct: 189 SCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEG-----EAWKNV 243
Query: 429 RALKRSLLVALRCVDPDSEKRPKMS 453
+ L+ L VDP+ KR KMS
Sbjct: 244 SQEAKDLIQGLLTVDPN--KRLKMS 266
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 34/242 (14%)
Query: 192 NVLGEGGYGVVYKGRLIN------GSEVAVKKLLNNLGQAE-KEFRVEVEAIGHVRHKNL 244
LGEG +G V K + + VAVK L N +E ++ E + V H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 245 VRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMR--------------------NQGNLT 284
++L G C + +L+ EY G+L +L + + ++ LT
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 285 WEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES 344
+ ++ + YL E K+VHRD+ + NIL+ + K+SDFGL++ + +S
Sbjct: 149 MGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 345 HITTRVMGTFG--YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNL 401
+ R G ++A E + +SD++SFGVLL E VT G +P P NL
Sbjct: 206 XV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL 264
Query: 402 VE 403
++
Sbjct: 265 LK 266
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 194 LGEGGYGVVYKGRL-INGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI 252
+GEG G+V + +G VAVKK+ Q + EV + +H+N+V + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
G +V E++ G L + N+ + V + +AL+ LH V+H
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ---GVIH 143
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RDIKS +IL+ + K+SDFG + S E ++GT ++APE + + D
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 202
Query: 373 IYSFGVLLLEAVTGRDP 389
I+S G++++E V G P
Sbjct: 203 IWSLGIMVIEMVDGEPP 219
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 33/211 (15%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLVRLLGYCI 252
+G+G +G V++G+ G EVAVK + + FR E+ +RH+N+ LG+
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENI---LGFIA 103
Query: 253 EG-------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
LV +Y +G+L +L N+ +T E +K+ + TA LA+LH
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 158
Query: 306 I-----EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI---TTRVMGTFGYV 357
I +P + HRD+KS NIL+ ++D GLA DS I +GT Y+
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 358 APEYANTGM------LNEKSDIYSFGVLLLE 382
APE + + +++DIY+ G++ E
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWE 249
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 127/303 (41%), Gaps = 45/303 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQAE-KEFRVEVE 234
E +R LG G +G V + + VAVK L +E + E++
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 82
Query: 235 AIGHV-RHKNLVRLLGYCIE-GVHRMLVYEYVNNGNLEQWLHGAMRNQ------------ 280
+ H+ H N+V LLG C + G M++ E+ GNL +L + RN+
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLY 141
Query: 281 -GNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL 339
LT E + AK + +L K +HRD+ + NIL+ ++ K+ DFGLA+ +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 340 DSGESHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPAN 397
+ ++APE + +SD++SFGVLL E + G P P
Sbjct: 199 XKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGV 254
Query: 398 EVNLVEWLKMMVGTR-RAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
+++ ++ GTR RA + P + L C + +RP S++V
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 302
Query: 457 RML 459
L
Sbjct: 303 EHL 305
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---G 125
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 24/265 (9%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + + YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---G 124
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVDYGRPANEVN-LVEWLKMMVGTRRAEEVVDPNLEVKP 426
E D++S G++L + G P D +P++ +W + + ++P ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD--QPSDSCQEYSDW-------KEKKTYLNPWKKIDS 235
Query: 427 ATRALKRSLLV---ALRCVDPDSEK 448
A AL +LV + R PD +K
Sbjct: 236 APLALLHKILVENPSARITIPDIKK 260
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 177 TLRDLEIATNRFSAENVLGEGGYGVVYKGRLIN----GSEVAVKKLLNNLGQAEKE-FRV 231
+ RD EI R +GEG +G V++G ++ VA+K N + +E F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 232 EVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKV 291
E + H ++V+L+G E ++ E G L +L + +L + +
Sbjct: 441 EALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKFSLDLASLILY 496
Query: 292 IIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVM 351
+ ALAYL + VHRDI + N+L+ K+ DFGL++ ++ + ++
Sbjct: 497 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 352 GTFGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
++APE N SD++ FGV + E
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 128/303 (42%), Gaps = 45/303 (14%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQAE-KEFRVEVE 234
E +R LG G +G V + + VAVK L +E + E++
Sbjct: 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 119
Query: 235 AIGHV-RHKNLVRLLGYCIE-GVHRMLVYEYVNNGNLEQWLHGAMRNQ------------ 280
+ H+ H N+V LLG C + G M++ E+ GNL +L + RN+
Sbjct: 120 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLY 178
Query: 281 -GNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL 339
LT E + AK + +L K +HRD+ + NIL+ ++ K+ DFGLA+ +
Sbjct: 179 KDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI 235
Query: 340 DSGESHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPAN 397
++ ++APE + +SD++SFGVLL E + G P P
Sbjct: 236 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGV 291
Query: 398 EVNLVEWLKMMVGTR-RAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
+++ ++ GTR RA + P + L C + +RP S++V
Sbjct: 292 KIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 339
Query: 457 RML 459
L
Sbjct: 340 EHL 342
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 24/265 (9%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + + YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---G 125
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVDYGRPANEVN-LVEWLKMMVGTRRAEEVVDPNLEVKP 426
E D++S G++L + G P D +P++ +W + + ++P ++
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD--QPSDSCQEYSDW-------KEKKTYLNPWKKIDS 236
Query: 427 ATRALKRSLLV---ALRCVDPDSEK 448
A AL +LV + R PD +K
Sbjct: 237 APLALLHKILVENPSARITIPDIKK 261
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---G 125
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 128/282 (45%), Gaps = 38/282 (13%)
Query: 176 FTLRDLEIATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVK----KLLNNLGQAEKEFR 230
F I ++R+ + VLG+G +G V+ I G E AVK + + E R
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
EV+ + + H N+ +L + + + LV E G L + ++ + +
Sbjct: 76 -EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAAR 130
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDD---EFNAKVSDFGLAKLLDSGESHIT 347
+I + Y H+ K+VHRD+K N+L++ + N ++ DFGL+ ++ S
Sbjct: 131 IIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKX 185
Query: 348 TRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLV----- 402
+GT Y+APE + G +EK D++S GV+L ++G P + ANE +++
Sbjct: 186 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDILKKVEK 241
Query: 403 --------EWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLL 436
+W K+ + A++++ L P+ R R L
Sbjct: 242 GKYTFELPQWKKV---SESAKDLIRKXLTYVPSXRISARDAL 280
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 131/309 (42%), Gaps = 57/309 (18%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQAE-KEFRVEVE 234
E +R LG G +G V + + VAVK L +E + E++
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 82
Query: 235 AIGHV-RHKNLVRLLGYCIE-GVHRMLVYEYVNNGNLEQWLHGAMRNQ------------ 280
+ H+ H N+V LLG C + G M++ E+ GNL +L + RN+
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLY 141
Query: 281 -GNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-- 337
LT E + AK + +L K +HRD+ + NIL+ ++ K+ DFGLA+
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 338 -----LLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVD 391
+ G++ + + ++APE + +SD++SFGVLL E + G P
Sbjct: 199 YKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY- 251
Query: 392 YGRPANEVNLVEWLKMMVGTR-RAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRP 450
P +++ ++ GTR RA + P + L C + +RP
Sbjct: 252 ---PGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRP 296
Query: 451 KMSQVVRML 459
S++V L
Sbjct: 297 TFSELVEHL 305
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 33/211 (15%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLVRLLGYCI 252
+G+G +G V++G+ G EVAVK + + FR E+ +RH+N+ LG+
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENI---LGFIA 65
Query: 253 EG-------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
LV +Y +G+L +L N+ +T E +K+ + TA LA+LH
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 306 I-----EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI---TTRVMGTFGYV 357
I +P + HRD+KS NIL+ ++D GLA DS I +GT Y+
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 180
Query: 358 APEYANTGM------LNEKSDIYSFGVLLLE 382
APE + + +++DIY+ G++ E
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWE 211
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 131/309 (42%), Gaps = 57/309 (18%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQAE-KEFRVEVE 234
E +R LG G +G V + + VAVK L +E + E++
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 235 AIGHV-RHKNLVRLLGYCIE-GVHRMLVYEYVNNGNLEQWLHGAMRNQ------------ 280
+ H+ H N+V LLG C + G M++ E+ GNL +L + RN+
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLY 132
Query: 281 -GNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-- 337
LT E + AK + +L K +HRD+ + NIL+ ++ K+ DFGLA+
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 338 -----LLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVD 391
+ G++ + + ++APE + +SD++SFGVLL E + G P
Sbjct: 190 XKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY- 242
Query: 392 YGRPANEVNLVEWLKMMVGTR-RAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRP 450
P +++ ++ GTR RA + P + L C + +RP
Sbjct: 243 ---PGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRP 287
Query: 451 KMSQVVRML 459
S++V L
Sbjct: 288 TFSELVEHL 296
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 194 LGEGGYGVVYKGRL-INGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI 252
+GEG G+V + +G VAVKK+ Q + EV + +H+N+V + +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
G +V E++ G L + N+ + V + +AL+ LH V+H
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ---GVIH 193
Query: 313 RDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSD 372
RDIKS +IL+ + K+SDFG + S E ++GT ++APE + + D
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 252
Query: 373 IYSFGVLLLEAVTGRDP 389
I+S G++++E V G P
Sbjct: 253 IWSLGIMVIEMVDGEPP 269
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 131/309 (42%), Gaps = 57/309 (18%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKG------RLINGSEVAVKKLLNNLGQAE-KEFRVEVE 234
E +R LG G +G V + + VAVK L +E + E++
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 235 AIGHV-RHKNLVRLLGYCIE-GVHRMLVYEYVNNGNLEQWLHGAMRNQ------------ 280
+ H+ H N+V LLG C + G M++ E+ GNL +L + RN+
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLY 132
Query: 281 -GNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK-- 337
LT E + AK + +L K +HRD+ + NIL+ ++ K+ DFGLA+
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 338 -----LLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVD 391
+ G++ + + ++APE + +SD++SFGVLL E + G P
Sbjct: 190 XKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY- 242
Query: 392 YGRPANEVNLVEWLKMMVGTR-RAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRP 450
P +++ ++ GTR RA + P + L C + +RP
Sbjct: 243 ---PGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRP 287
Query: 451 KMSQVVRML 459
S++V L
Sbjct: 288 TFSELVEHL 296
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 37/274 (13%)
Query: 194 LGEGGYGVVYKGRLI----NGSEVAVKKLLNNLGQAEKE-FRVEVEAIGHVRHKNLVRLL 248
LG G +G V+ L+ +G E +K + + Q E E+E + + H N++++
Sbjct: 30 LGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIF 86
Query: 249 GYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIE 307
E H M +V E G L + + A L+ +++ ALAY H
Sbjct: 87 E-VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-- 143
Query: 308 PKVVHRDIKSSNILIDD---EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANT 364
VVH+D+K NIL D K+ DFGLA+L S E +T GT Y+APE
Sbjct: 144 -HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPEVFKR 200
Query: 365 GMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPN--L 422
+ K DI+S GV++ +TG P G EV K +PN +
Sbjct: 201 D-VTFKCDIWSAGVVMYFLLTGCLPFT-GTSLEEVQQKATYK------------EPNYAV 246
Query: 423 EVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
E +P T +++ + + + D E+RP +QV+
Sbjct: 247 ECRPLT---PQAVDLLKQMLTKDPERRPSAAQVL 277
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + L++ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLSFCH 120
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ T V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + + YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---G 125
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + + YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---G 125
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + + YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---G 125
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 139/284 (48%), Gaps = 43/284 (15%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKE-FRVEVEAIGHVRHKNLVRLLGYCI 252
LG+G +G VYK + +A K++ + E E + VE+E + H +V+LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII-GTAKALAYLHEAIEPKVV 311
++ E+ G ++ + + LT E +++V+ +AL +LH +++
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIM---LELDRGLT-EPQIQVVCRQMLEALNFLHSK---RII 131
Query: 312 HRDIKSSNILIDDEFNAKVSDFGLA----KLLDSGESHITTRVMGTFGYVAPEYANTGML 367
HRD+K+ N+L+ E + +++DFG++ K L +S I GT ++APE +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETM 186
Query: 368 NE-----KSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPNL 422
+ K+DI+S G+ L+E + +P P +E+N M V + A+ DP
Sbjct: 187 KDTPYDYKADIWSLGITLIE-MAQIEP-----PHHELN-----PMRVLLKIAKS--DPPT 233
Query: 423 EVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEADDYPF 466
+ P+ +++ + + +D + E RP +Q++ ++PF
Sbjct: 234 LLTPSKWSVEFRDFLKI-ALDKNPETRPSAAQLL------EHPF 270
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 33/211 (15%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLVRLLGYCI 252
+G+G +G V++G+ G EVAVK + + FR E+ +RH+N+ LG+
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENI---LGFIA 70
Query: 253 EG-------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
LV +Y +G+L +L N+ +T E +K+ + TA LA+LH
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 306 I-----EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI---TTRVMGTFGYV 357
I +P + HRD+KS NIL+ ++D GLA DS I +GT Y+
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 358 APEYANTGM------LNEKSDIYSFGVLLLE 382
APE + + +++DIY+ G++ E
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWE 216
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 33/211 (15%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLVRLLGYCI 252
+G+G +G V++G+ G EVAVK + + FR E+ +RH+N+ LG+
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENI---LGFIA 64
Query: 253 EG-------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
LV +Y +G+L +L N+ +T E +K+ + TA LA+LH
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 119
Query: 306 I-----EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI---TTRVMGTFGYV 357
I +P + HRD+KS NIL+ ++D GLA DS I +GT Y+
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 179
Query: 358 APEYANTGM------LNEKSDIYSFGVLLLE 382
APE + + +++DIY+ G++ E
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWE 210
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 33/211 (15%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLVRLLGYCI 252
+G+G +G V++G+ G EVAVK + + FR E+ +RH+N+ LG+
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENI---LGFIA 90
Query: 253 EG-------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
LV +Y +G+L +L N+ +T E +K+ + TA LA+LH
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 145
Query: 306 I-----EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI---TTRVMGTFGYV 357
I +P + HRD+KS NIL+ ++D GLA DS I +GT Y+
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 205
Query: 358 APEYANTGM------LNEKSDIYSFGVLLLE 382
APE + + +++DIY+ G++ E
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWE 236
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ FGLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 138/284 (48%), Gaps = 43/284 (15%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKE-FRVEVEAIGHVRHKNLVRLLGYCI 252
LG+G +G VYK + +A K++ + E E + VE+E + H +V+LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII-GTAKALAYLHEAIEPKVV 311
++ E+ G ++ + + LT E +++V+ +AL +LH +++
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIM---LELDRGLT-EPQIQVVCRQMLEALNFLHSK---RII 139
Query: 312 HRDIKSSNILIDDEFNAKVSDFGLA----KLLDSGESHITTRVMGTFGYVAPEYANTGML 367
HRD+K+ N+L+ E + +++DFG++ K L +S I GT ++APE +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETM 194
Query: 368 NE-----KSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPNL 422
+ K+DI+S G+ L+E + +P P +E+N + L + + DP
Sbjct: 195 KDTPYDYKADIWSLGITLIE-MAQIEP-----PHHELNPMRVLLKIAKS-------DPPT 241
Query: 423 EVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEADDYPF 466
+ P+ +++ + + +D + E RP +Q++ ++PF
Sbjct: 242 LLTPSKWSVEFRDFLKI-ALDKNPETRPSAAQLL------EHPF 278
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 33/211 (15%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLVRLLGYCI 252
+G+G +G V++G+ G EVAVK + + FR E+ +RH+N+ LG+
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENI---LGFIA 67
Query: 253 EG-------VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
LV +Y +G+L +L N+ +T E +K+ + TA LA+LH
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 306 I-----EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI---TTRVMGTFGYV 357
I +P + HRD+KS NIL+ ++D GLA DS I +GT Y+
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 182
Query: 358 APEYANTGM------LNEKSDIYSFGVLLLE 382
APE + + +++DIY+ G++ E
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWE 213
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + YLH
Sbjct: 71 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---G 123
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + + YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---G 124
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---G 125
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+V+ +L++++ + + + + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 123
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 180 GCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 134/287 (46%), Gaps = 32/287 (11%)
Query: 181 LEIATNRFSAENVLGEGGYGVVYKGRLI-NGSEVAVKKLLNNL-GQAEKEFRVEVE-AIG 237
+E+ + LG G YGVV K R + +G +AVK++ + Q +K ++++ ++
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61
Query: 238 HVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
V V G + E ++ +L+++ + + + K+ + K
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVK 120
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGY 356
AL +LH + V+HRD+K SN+LI+ K+ DFG++ L+D I G Y
Sbjct: 121 ALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPY 175
Query: 357 VAPEYANTGMLNE-----KSDIYSFGVLLLEAVTGRDPVD-YGRPANEVNLVEWLKMMVG 410
+APE N LN+ KSDI+S G+ ++E R P D +G P ++ V
Sbjct: 176 MAPERINPE-LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV-------- 226
Query: 411 TRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVR 457
V +P+ ++ PA + + +C+ +S++RP ++++
Sbjct: 227 ------VEEPSPQL-PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---G 124
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---G 124
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKGRLIN----GSEVAVKKLLNNLGQAEKE-FRVEV 233
RD EI R +GEG +G V++G ++ VA+K N + +E F E
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ H ++V+L+G E ++ E G L +L + +L + +
Sbjct: 443 LTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKFSLDLASLILYAY 498
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGT 353
+ ALAYL + VHRDI + N+L+ K+ DFGL++ ++ + ++
Sbjct: 499 QLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 555
Query: 354 FGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
++APE N SD++ FGV + E
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWE 584
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---G 124
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---G 125
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---G 124
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + + YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---G 124
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---G 124
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 193 VLGE-GGYGVVYKGRLINGSEVAVKKLLNNLGQAEKE-FRVEVEAIGHVRHKNLVRLLGY 250
++GE G +G VYK + S +A K+++ + E E + VE++ + H N+V+LL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 251 CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII-GTAKALAYLHEAIEPK 309
+ ++ E+ G ++ M E++++V+ T AL YLH+ K
Sbjct: 76 FYYENNLWILIEFCAGGAVD----AVMLELERPLTESQIQVVCKQTLDALNYLHDN---K 128
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY-----ANT 364
++HRD+K+ NIL + + K++DFG++ +GT ++APE +
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKD 188
Query: 365 GMLNEKSDIYSFGVLLLEAVTGRDP 389
+ K+D++S G+ L+E P
Sbjct: 189 RPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 45/241 (18%)
Query: 194 LGEGGYGVVYKGRLIN------GSEVAVKKLLNNL-GQAEKEFRVEVEAIGHVRHKNLVR 246
+GEG +G V++ R + VAVK L + +F+ E + + N+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWL------------HGAMRNQGN--------LTWE 286
LLG C G L++EY+ G+L ++L H + + L+
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 287 ARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDS----- 341
++ + A +AYL E K VHRD+ + N L+ + K++DFGL++ + S
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 342 --GESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANE 398
G I R M PE +SD++++GV+L E + G P YG E
Sbjct: 232 ADGNDAIPIRWM------PPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY-YGMAHEE 284
Query: 399 V 399
V
Sbjct: 285 V 285
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG YG V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---G 124
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ D GLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 120
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 176
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 123
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 180 GCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 65
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 122
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 178
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 179 GCKYYSTAV-----DIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 120
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 176
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 119
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 175
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 65
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 122
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 178
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 179 GCKYYSTAV-----DIWSLGCIFAEMVTRR 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 119
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 175
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 123
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 180 GCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ D GLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+ K+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 120
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ T V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+ K+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 119
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ T V+ T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 120
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 176
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 67
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 124
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 180
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 181 GCKYYSTAV-----DIWSLGCIFAEMVTRR 205
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 65
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 122
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 123 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 178
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 179 GCKYYSTAV-----DIWSLGCIFAEMVTRR 203
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 111/244 (45%), Gaps = 41/244 (16%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQ-AEKEFRVEVEAIGHVRHKN 243
N +E +LG G G VV++G G VAVK++L + A E ++ E+ H N
Sbjct: 15 NLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDDH---PN 70
Query: 244 LVRLLGYCIEGVHRMLVYEY-VNNGNLEQWLHGAMRNQGNLTWEAR---MKVIIGTAKAL 299
++R YC E R L + N NL+ + + NL + + ++ A +
Sbjct: 71 VIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 300 AYLHEAIEPKVVHRDIKSSNILI--------DDEFNAK-----VSDFGLAKLLDSGESHI 346
A+LH K++HRD+K NIL+ D + A+ +SDFGL K LDSG+S
Sbjct: 129 AHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 347 TTRV---MGTFGYVAPEYANTG-------MLNEKSDIYSFGVLLLEAVT-GRDPV--DYG 393
T + GT G+ APE L DI+S G + ++ G+ P Y
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 394 RPAN 397
R +N
Sbjct: 246 RESN 249
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 13/197 (6%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLL---NNLGQAEKEFRVEVEAIGHVRHKNLVRLLGY 250
+GEG YGVVYK + G A+KK+ + G R E+ + ++H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDV 68
Query: 251 CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKV 310
+LV+E+++ +L++ L +G L ++ +AY H+ +V
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 311 VHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNE 369
+HRD+K N+LI+ E K++DFGLA+ T V+ T Y AP+ + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 370 KSDIYSFGVLLLEAVTG 386
DI+S G + E V G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 121
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 178 GCKYYSTAV-----DIWSLGCIFAEMVTRR 202
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 13/197 (6%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLL---NNLGQAEKEFRVEVEAIGHVRHKNLVRLLGY 250
+GEG YGVVYK + G A+KK+ + G R E+ + ++H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDV 68
Query: 251 CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKV 310
+LV+E+++ +L++ L +G L ++ +AY H+ +V
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 311 VHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNE 369
+HRD+K N+LI+ E K++DFGLA+ T V+ T Y AP+ + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 370 KSDIYSFGVLLLEAVTG 386
DI+S G + E V G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 121
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 178 GCKYYSTAV-----DIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 121
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 122 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 178 GCKYYSTAV-----DIWSLGCIFAEMVTRR 202
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 96
Query: 242 KNLVRLLGYCIEGVHRMLV-YEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
V+L +C + ++ Y NG L +++ R G+ AL
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 151
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAP 359
YLH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+P
Sbjct: 152 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
E + SD+++ G ++ + V G P G
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 242
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ + +G G YG V G VAVKKL ++ A++ +R E+ + H++H+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQ----GNLTWEARMKVIIGTAKA 298
N++ LL R L E N+ L L GA N LT + +I +
Sbjct: 82 NVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L Y+H A ++HRD+K SN+ ++++ K+ D GLA+ D T + T Y A
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE----MTGYVATRWYRA 190
Query: 359 PEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
PE M N+ DI+S G ++ E +TGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 120
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 176
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSE----VAVKKLLNNLGQAEKE-FRVEVE 234
D EI R +GEG +G V++G ++ VA+K N + +E F E
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+ H ++V+L+G E ++ E G L +L + +L + +
Sbjct: 61 TMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQ 116
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTF 354
+ ALAYL + VHRDI + N+L+ K+ DFGL++ ++ + ++
Sbjct: 117 LSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 173
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLE 382
++APE N SD++ FGV + E
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWE 201
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 132/318 (41%), Gaps = 48/318 (15%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLIN-GSE-----VAVKKLLNNLGQAEKE-FRVEVE 234
E N LG G +G V + G E VAVK L + EKE E++
Sbjct: 27 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 86
Query: 235 AIGHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWL------------------HG 275
+ H+ +H+N+V LLG C G +++ EY G+L +L G
Sbjct: 87 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEG 146
Query: 276 AMRNQGN-LTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFG 334
+ G L + A+ +A+L +HRD+ + N+L+ + AK+ DFG
Sbjct: 147 LDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFG 203
Query: 335 LAKLLDSGESHITT-RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
LA+ + + ++I ++APE + +SD++S+G+LL E +
Sbjct: 204 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-------- 255
Query: 394 RPANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMS 453
+ L + ++V ++ + V D +PA A K + C + RP
Sbjct: 256 -----LGLNPYPGILVNSKFYKLVKDGYQMAQPAF-APKNIYSIMQACWALEPTHRPTFQ 309
Query: 454 QVVRMLEADDYPFREDRR 471
Q+ L+ +EDRR
Sbjct: 310 QICSFLQEQA---QEDRR 324
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 13/197 (6%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLL---NNLGQAEKEFRVEVEAIGHVRHKNLVRLLGY 250
+GEG YGVVYK + G A+KK+ + G R E+ + ++H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDV 68
Query: 251 CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKV 310
+LV+E+++ +L++ L +G L ++ +AY H+ +V
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 311 VHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNE 369
+HRD+K N+LI+ E K++DFGLA+ T ++ T Y AP+ + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYST 180
Query: 370 KSDIYSFGVLLLEAVTG 386
DI+S G + E V G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L+ ++ + + + + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 123
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 180 GCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 34/242 (14%)
Query: 192 NVLGEGGYGVVYKGRLIN------GSEVAVKKLLNNLGQAE-KEFRVEVEAIGHVRHKNL 244
LGEG +G V K + + VAVK L N +E ++ E + V H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 245 VRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMR--------------------NQGNLT 284
++L G C + +L+ EY G+L +L + + ++ LT
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 285 WEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES 344
+ ++ + YL E +VHRD+ + NIL+ + K+SDFGL++ + +S
Sbjct: 149 MGDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 345 HITTRVMGTFG--YVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNL 401
+ R G ++A E + +SD++SFGVLL E VT G +P P NL
Sbjct: 206 XV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL 264
Query: 402 VE 403
++
Sbjct: 265 LK 266
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 124/293 (42%), Gaps = 41/293 (13%)
Query: 193 VLGEGGYGVVYKGRLINGS------EVAVKKLLNNLGQAEKE-FRVEVEAIGHV-RHKNL 244
VLG G +G V S +VAVK L +E+E E++ + + H+N+
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 245 VRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGA----------MRNQGNLTWEARMKVI-- 292
V LLG C L++EY G+L +L NQ L E + V+
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 293 ---IGTAKALAYLHEAIEPK-VVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITT 348
+ A +A E +E K VHRD+ + N+L+ K+ DFGLA+ + S +++
Sbjct: 172 EDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVR 231
Query: 349 -RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWLK 406
++APE G+ KSD++S+G+LL E + G +P G P + N
Sbjct: 232 GNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP-GIPVD-ANFY---- 285
Query: 407 MMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRML 459
+++ ++ A + ++ C DS KRP + L
Sbjct: 286 ---------KLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGR-LINGSE-VAVKKLLNNLGQAEKEFRV--EVEAIGHV 239
A ++ +GEG YG V+K R L NG VA+K++ G+ EV + H+
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 240 R---HKNLVRLLGYCI-----EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKV 291
H N+VRL C LV+E+V+ +L +L + + E +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKV--PEPGVPTETIKDM 125
Query: 292 IIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVM 351
+ + L +LH +VVHRD+K NIL+ K++DFGLA++ S + +T+ V+
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY-SFQMALTS-VV 180
Query: 352 GTFGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
T Y APE D++S G + E
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L+ ++ + + + + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 120
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 176
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGR-LINGSE-VAVKKLLNNLGQAEKEFRV--EVEAIGHV 239
A ++ +GEG YG V+K R L NG VA+K++ G+ EV + H+
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 240 R---HKNLVRLLGYCI-----EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKV 291
H N+VRL C LV+E+V+ +L +L + + E +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKV--PEPGVPTETIKDM 125
Query: 292 IIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVM 351
+ + L +LH +VVHRD+K NIL+ K++DFGLA++ S + +T+ V+
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY-SFQMALTS-VV 180
Query: 352 GTFGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
T Y APE D++S G + E
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 10/232 (4%)
Query: 164 LPEISHLGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGRL-INGSEVAVKKLLNNL 222
L + L + W L + + F VLG GG+G V+ ++ G A KKL
Sbjct: 163 LDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKR 222
Query: 223 GQAEKEFR---VEVEAIGHVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMR 278
+ K ++ VE + + V H + L Y E + LV +N G++ ++
Sbjct: 223 LKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDE 281
Query: 279 NQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+ + I TA+ ++ L + +++RD+K N+L+DD+ N ++SD GLA
Sbjct: 282 DNPGFQ---EPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVE 338
Query: 339 LDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
L +G++ T GT G++APE + D ++ GV L E + R P
Sbjct: 339 LKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 10/232 (4%)
Query: 164 LPEISHLGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGRL-INGSEVAVKKLLNNL 222
L + L + W L + + F VLG GG+G V+ ++ G A KKL
Sbjct: 163 LDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKR 222
Query: 223 GQAEKEFR---VEVEAIGHVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMR 278
+ K ++ VE + + V H + L Y E + LV +N G++ ++
Sbjct: 223 LKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDE 281
Query: 279 NQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+ + I TA+ ++ L + +++RD+K N+L+DD+ N ++SD GLA
Sbjct: 282 DNPGFQ---EPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVE 338
Query: 339 LDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
L +G++ T GT G++APE + D ++ GV L E + R P
Sbjct: 339 LKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 123
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 124 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 180 GCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 184 ATNRFSAENVLGEGGYGVVYKGR-LINGSE-VAVKKLLNNLGQAEKEFRV--EVEAIGHV 239
A ++ +GEG YG V+K R L NG VA+K++ G+ EV + H+
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 240 R---HKNLVRLLGYCI-----EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKV 291
H N+VRL C LV+E+V+ +L +L + + E +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKV--PEPGVPTETIKDM 125
Query: 292 IIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVM 351
+ + L +LH +VVHRD+K NIL+ K++DFGLA++ + T V+
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVV 180
Query: 352 GTFGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
T Y APE D++S G + E
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 10/232 (4%)
Query: 164 LPEISHLGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGRL-INGSEVAVKKLLNNL 222
L + L + W L + + F VLG GG+G V+ ++ G A KKL
Sbjct: 163 LDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKR 222
Query: 223 GQAEKEFR---VEVEAIGHVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMR 278
+ K ++ VE + + V H + L Y E + LV +N G++ ++
Sbjct: 223 LKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDE 281
Query: 279 NQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL 338
+ + I TA+ ++ L + +++RD+K N+L+DD+ N ++SD GLA
Sbjct: 282 DNPGFQ---EPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVE 338
Query: 339 LDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
L +G++ T GT G++APE + D ++ GV L E + R P
Sbjct: 339 LKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L++++ + + + + LA+ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 121
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 122 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 178 GCKYYSTAV-----DIWSLGCIFAEMVTRR 202
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 10/222 (4%)
Query: 174 HWFTLRDLEIATNRFSAENVLGEGGYGVVYKGRL-INGSEVAVKKLLNNLGQAEKEFR-- 230
W L + + F VLG GG+G V+ ++ G A KKL + K ++
Sbjct: 173 QWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA 232
Query: 231 -VEVEAIGHVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEAR 288
VE + + V H + L Y E + LV +N G++ ++ +
Sbjct: 233 MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ---E 288
Query: 289 MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITT 348
+ I TA+ ++ L + +++RD+K N+L+DD+ N ++SD GLA L +G++ T
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TK 347
Query: 349 RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
GT G++APE + D ++ GV L E + R P
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSEV-AVKKLLNNLGQAEKEFR---VEVEAIGHVRHKN 243
FS +G G +G VY R + SEV A+KK+ + Q+ ++++ EV + +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ G + LV EY G+ L + + A V G + LAYLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLH 171
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY-- 361
++HRD+K+ NIL+ + K+ DFG A ++ + GT ++APE
Sbjct: 172 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVIL 223
Query: 362 -ANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
+ G + K D++S G+ +E + P+
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 194 LGEGGYGVVYKG-RLINGSEVAVKKLLNN--LGQAEKEFRVE--VEAIGHVRHKNLVRLL 248
LGEG +G V G +VA+K ++N L +++ + R+E + + +RH ++++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 70
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
++V EY N E + + R++ + EAR + A+ Y H
Sbjct: 71 DVIKSKDEIIMVIEYAGN---ELFDYIVQRDKMS-EQEAR-RFFQQIISAVEYCHRH--- 122
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGML- 367
K+VHRD+K N+L+D+ N K++DFGL+ ++ G T+ G+ Y APE + +
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISGKLYA 180
Query: 368 NEKSDIYSFGVLLLEAVTGRDPVD 391
+ D++S GV+L + R P D
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 181 LEIATNRFSAENVLGEGGYGVVYKGRLINGSEV-AVKKLLNNLGQAEKEFR---VEVEAI 236
+++ F +LG+G +G V+ ++ A+K L ++ + + VE +
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 72
Query: 237 GHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGT 295
H L + + V EY+N G+L + + + ++I+G
Sbjct: 73 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG- 131
Query: 296 AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFG 355
L +LH +V+RD+K NIL+D + + K++DFG+ K G++ T GT
Sbjct: 132 ---LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTPD 184
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
Y+APE N D +SFGVLL E + G+ P
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSEV-AVKKLLNNLGQAEKEFR---VEVEAIGHVRHKN 243
FS +G G +G VY R + SEV A+KK+ + Q+ ++++ EV + +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
++ G + LV EY G+ L + + A V G + LAYLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLH 132
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY-- 361
++HRD+K+ NIL+ + K+ DFG A ++ + GT ++APE
Sbjct: 133 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVIL 184
Query: 362 -ANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
+ G + K D++S G+ +E + P+
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L+ ++ + + + + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 123
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 180 GCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 194 LGEGGYGVVYKG-RLINGSEVAVKKLLNN--LGQAEKEFRVE--VEAIGHVRHKNLVRLL 248
LGEG +G V G +VA+K ++N L +++ + R+E + + +RH ++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 80
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
++V EY N E + + R++ + EAR + A+ Y H
Sbjct: 81 DVIKSKDEIIMVIEYAGN---ELFDYIVQRDKMS-EQEAR-RFFQQIISAVEYCHRH--- 132
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGML- 367
K+VHRD+K N+L+D+ N K++DFGL+ ++ G T+ G+ Y APE + +
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISGKLYA 190
Query: 368 NEKSDIYSFGVLLLEAVTGRDPVD 391
+ D++S GV+L + R P D
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKN 243
F +GEG YGVVYK R + G VA+KK+ G R E+ + + H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 65
Query: 244 LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+V+LL LV+E+++ +L+ ++ + + + + LA+ H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALT--GIPLPLIKSYLFQLLQGLAFCH 122
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE--- 360
+V+HRD+K N+LI+ E K++DFGLA+ V+ T Y APE
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 178
Query: 361 ---YANTGMLNEKSDIYSFGVLLLEAVTGR 387
Y +T + DI+S G + E VT R
Sbjct: 179 GCKYYSTAV-----DIWSLGCIFAEMVTRR 203
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 194 LGEGGYGVVYKG-RLINGSEVAVKKLLNN--LGQAEKEFRVE--VEAIGHVRHKNLVRLL 248
LGEG +G V G +VA+K ++N L +++ + R+E + + +RH ++++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 74
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
++V EY N E + + R++ + EAR + A+ Y H
Sbjct: 75 DVIKSKDEIIMVIEYAGN---ELFDYIVQRDKMS-EQEAR-RFFQQIISAVEYCHRH--- 126
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGML- 367
K+VHRD+K N+L+D+ N K++DFGL+ ++ G T+ G+ Y APE + +
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISGKLYA 184
Query: 368 NEKSDIYSFGVLLLEAVTGRDPVD 391
+ D++S GV+L + R P D
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 15/155 (9%)
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H N+++L LV++ + G L +L + L+ + K++ + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 138
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
LH+ +VHRD+K NIL+DD+ N K++DFG + LD GE V GT Y+APE
Sbjct: 139 ALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPE 193
Query: 361 YANTGM------LNEKSDIYSFGVLLLEAVTGRDP 389
M ++ D++S GV++ + G P
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 194 LGEGGYGVVYKG-RLINGSEVAVKKLLNN--LGQAEKEFRVE--VEAIGHVRHKNLVRLL 248
LGEG +G V G +VA+K ++N L +++ + R+E + + +RH ++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 79
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
++V EY N E + + R++ + EAR + A+ Y H
Sbjct: 80 DVIKSKDEIIMVIEYAGN---ELFDYIVQRDKMS-EQEAR-RFFQQIISAVEYCHRH--- 131
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGML- 367
K+VHRD+K N+L+D+ N K++DFGL+ ++ G T+ G+ Y APE + +
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISGKLYA 189
Query: 368 NEKSDIYSFGVLLLEAVTGRDPVD 391
+ D++S GV+L + R P D
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 15/155 (9%)
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H N+++L LV++ + G L +L + L+ + K++ + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 138
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
LH+ +VHRD+K NIL+DD+ N K++DFG + LD GE V GT Y+APE
Sbjct: 139 ALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LRSVCGTPSYLAPE 193
Query: 361 YANTGM------LNEKSDIYSFGVLLLEAVTGRDP 389
M ++ D++S GV++ + G P
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 15/155 (9%)
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H N+++L LV++ + G L +L + L+ + K++ + +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 125
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
LH+ +VHRD+K NIL+DD+ N K++DFG + LD GE V GT Y+APE
Sbjct: 126 ALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPE 180
Query: 361 YANTGM------LNEKSDIYSFGVLLLEAVTGRDP 389
M ++ D++S GV++ + G P
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLI----NGSEVAVKKLLNNLGQAEKEFRVEVE--AIGHV 239
+ F VLG+G +G V+ R + +G A+K L + R ++E + V
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 240 RHKNLVRL-LGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
H +V+L + EG L+ +++ G+L + + T E + A
Sbjct: 88 NHPFVVKLHYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALG 142
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
L +LH +++RD+K NIL+D+E + K++DFGL+K E + GT Y+A
Sbjct: 143 LDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVEYMA 198
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
PE N + +D +S+GVL+ E +TG P
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 25/225 (11%)
Query: 186 NRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL--------LNNLGQAEKEFRVEVEAI 236
++ ++V+G G VV + G E AVK + L + + R E +
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 237 GHVR-HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGT 295
V H +++ L+ LV++ + G L +L + L+ + ++
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKETRSIMRSL 209
Query: 296 AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFG 355
+A+++LH +VHRD+K NIL+DD ++SDFG + L+ GE + GT G
Sbjct: 210 LEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPG 264
Query: 356 YVAPEYANTGM------LNEKSDIYSFGVLLLEAVTGRDPVDYGR 394
Y+APE M ++ D+++ GV+L + G P + R
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR 309
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGY 250
+GEG YGVVYK + G VA+K++ + G R E+ + + H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHPNIVSLIDV 87
Query: 251 CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII-GTAKALAYLHEAIEPK 309
LV+E+ +E+ L + ++++K+ + + +A+ H+ +
Sbjct: 88 IHSERCLTLVFEF-----MEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---R 139
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLN 368
++HRD+K N+LI+ + K++DFGLA+ T V+ T Y AP+ + +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 369 EKSDIYSFGVLLLEAVTGR 387
DI+S G + E +TG+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 16/237 (6%)
Query: 156 VTASPLIGLPEISHLGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAV 215
VTAS P + L +W + + ++ F E+ LG G +VY+ + +
Sbjct: 26 VTAS---AAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYA 82
Query: 216 KKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHG 275
K+L +K R E+ + + H N+++L LV E V G L
Sbjct: 83 LKVLKKTVD-KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL----FD 137
Query: 276 AMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID---DEFNAKVSD 332
+ +G + + +A+AYLHE +VHRD+K N+L + K++D
Sbjct: 138 RIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIAD 194
Query: 333 FGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
FGL+K+++ + V GT GY APE + D++S G++ + G +P
Sbjct: 195 FGLSKIVE--HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGY 250
+GEG YGVVYK + G VA+K++ + G R E+ + + H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHPNIVSLIDV 87
Query: 251 CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII-GTAKALAYLHEAIEPK 309
LV+E+ +E+ L + ++++K+ + + +A+ H+ +
Sbjct: 88 IHSERCLTLVFEF-----MEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---R 139
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLN 368
++HRD+K N+LI+ + K++DFGLA+ T V+ T Y AP+ + +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 369 EKSDIYSFGVLLLEAVTGR 387
DI+S G + E +TG+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 37/236 (15%)
Query: 190 AENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQ-AEKEFRVEVEAIGHVRHKNLVRL 247
+E +LG G G VV++G G VAVK++L + A E ++ E+ H N++R
Sbjct: 37 SEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDDH---PNVIRY 92
Query: 248 LGYCIEGVHRMLVYEY-VNNGNLEQWLHGAMRNQGNLTWEAR---MKVIIGTAKALAYLH 303
YC E R L + N NL+ + + NL + + ++ A +A+LH
Sbjct: 93 --YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 304 EAIEPKVVHRDIKSSNILI--------DDEFNAK-----VSDFGLAKLLDSGESHITTRV 350
K++HRD+K NIL+ D + A+ +SDFGL K LDSG+ +
Sbjct: 151 SL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 351 ---MGTFGYVAPEY---ANTGMLNEKSDIYSFGVLLLEAVT-GRDPV--DYGRPAN 397
GT G+ APE + L DI+S G + ++ G+ P Y R +N
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN 263
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 37/236 (15%)
Query: 190 AENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQ-AEKEFRVEVEAIGHVRHKNLVRL 247
+E +LG G G VV++G G VAVK++L + A E ++ E+ H N++R
Sbjct: 37 SEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDDH---PNVIRY 92
Query: 248 LGYCIEGVHRMLVYEY-VNNGNLEQWLHGAMRNQGNLTWEAR---MKVIIGTAKALAYLH 303
YC E R L + N NL+ + + NL + + ++ A +A+LH
Sbjct: 93 --YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 304 EAIEPKVVHRDIKSSNILI--------DDEFNAK-----VSDFGLAKLLDSGESHITTRV 350
K++HRD+K NIL+ D + A+ +SDFGL K LDSG+ +
Sbjct: 151 SL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 351 ---MGTFGYVAPEY---ANTGMLNEKSDIYSFGVLLLEAVT-GRDPV--DYGRPAN 397
GT G+ APE + L DI+S G + ++ G+ P Y R +N
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN 263
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 25/225 (11%)
Query: 181 LEIATNRFSAE-------NVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEV 233
L I R+ AE +G G G V+K R V K + G E+ R+ +
Sbjct: 13 LTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILM 72
Query: 234 EAIGHVRHKN---LVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
+ ++ + +V+ G I + E + G + L M QG + K
Sbjct: 73 DLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRM--QGPIPERILGK 128
Query: 291 VIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTR 349
+ + KAL YL E + V+HRD+K SNIL+D+ K+ DFG++ +L+D R
Sbjct: 129 MTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD---DKAKDR 183
Query: 350 VMGTFGYVAPEYANTGMLNE-----KSDIYSFGVLLLEAVTGRDP 389
G Y+APE + + ++D++S G+ L+E TG+ P
Sbjct: 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 188 FSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNN-LGQAEKEFRVEVEAIGHVRHKNLV 245
F + LG G + VV G AVK + L E E+ + ++H+N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 246 RLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
L H LV + V+ G L + +G T + +I A+ YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGEL----FDRIVEKGFYTEKDASTLIRQVLDAVYYLHRM 139
Query: 306 IEPKVVHRDIKSSNILI---DDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYA 362
+VHRD+K N+L D+E +SDFGL+K+ G+ + + GT GYVAPE
Sbjct: 140 ---GIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVL 194
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRDP 389
++ D +S GV+ + G P
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 181 LEIATNRFSAENVLGEGGYGVVYKGRLINGSEV-AVKKLLNNLGQAEKEFR---VEVEAI 236
+++ F +LG+G +G V+ ++ A+K L ++ + + VE +
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 71
Query: 237 GHV-RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGT 295
H L + + V EY+N G+L + + + ++I+G
Sbjct: 72 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG- 130
Query: 296 AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFG 355
L +LH +V+RD+K NIL+D + + K++DFG+ K G++ T GT
Sbjct: 131 ---LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGTPD 183
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
Y+APE N D +SFGVLL E + G+ P
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 11/204 (5%)
Query: 192 NVLGEGGYGVVYKG-RLINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
LGEG G V + VAVK + + + + E+ + H+N+V+ G
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
+ EG + L EY + G L + + + + YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---G 124
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGMLN 368
+ HRDIK N+L+D+ N K+SDFGLA + + + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -EKSDIYSFGVLLLEAVTGRDPVD 391
E D++S G++L + G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE--VAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNL 244
F+ +G+G +G V+KG + N ++ VA+K + L ++ + E+ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 245 VRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHE 304
+ G ++ ++ EY+ G+ L ++ + ++ K L YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHS 122
Query: 305 AIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANT 364
K +HRDIK++N+L+ + K++DFG+A L + T V GT ++APE
Sbjct: 123 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQ 178
Query: 365 GMLNEKSDIYSFGVLLLEAVTGRDP 389
+ K+DI+S G+ +E G P
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPP 203
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 186 NRFSAENVLGEGGYGVV---YKGRLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHV 239
R +G G YG V Y RL +VAVKKL +L A + +R E+ + H+
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHL 84
Query: 240 RHKNLVRLL-----GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+H+N++ LL IE + + + +L + +++Q L+ E ++
Sbjct: 85 KHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADL----NNIVKSQA-LSDEHVQFLVYQ 139
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTF 354
+ L Y+H A ++HRD+K SN+ ++++ ++ DFGLA+ D T + T
Sbjct: 140 LLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATR 192
Query: 355 GYVAPEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
Y APE M N+ DI+S G ++ E + G+
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 69
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 125
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 126 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 215
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 68
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 124
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 125 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 214
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 42/220 (19%)
Query: 193 VLGEGGYGVVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
++G G YG VYKG L + VAVK N + +RV + + H N+ R +
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPL-----MEHDNIARFI 73
Query: 249 ----GYCIEG-VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLH 303
+G + +LV EY NG+L ++L + W + ++ + LAYLH
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHSVTRGLAYLH 128
Query: 304 EAI------EPKVVHRDIKSSNILIDDEFNAKVSDFGLA------KLLDSG-ESHITTRV 350
+ +P + HRD+ S N+L+ ++ +SDFGL+ +L+ G E +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 351 MGTFGYVAPEYANTGMLN--------EKSDIYSFGVLLLE 382
+GT Y+APE G +N ++ D+Y+ G++ E
Sbjct: 189 VGTIRYMAPEVLE-GAVNLRDXESALKQVDMYALGLIYWE 227
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYVAP 359
LH ++HRD+K NIL++++ + +++DFG AK+L +S ++ + V GT YV+P
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSP 203
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
E ++ SD+++ G ++ + V G P G
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 186 NRFSAENVLGEGGYGVV---YKGRLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHV 239
R +G G YG V Y RL +VAVKKL +L A + +R E+ + H+
Sbjct: 20 QRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHL 76
Query: 240 RHKNLVRLL-----GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+H+N++ LL IE + + + +L + ++ Q L+ E ++
Sbjct: 77 KHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADL----NNIVKCQA-LSDEHVQFLVYQ 131
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTF 354
+ L Y+H A ++HRD+K SN+ ++++ ++ DFGLA+ D T + T
Sbjct: 132 LLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEE----MTGYVATR 184
Query: 355 GYVAPEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
Y APE M N+ DI+S G ++ E + G+
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 21/224 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV---EVEAIGHVRHK 242
R++ +LG+G +G V K + I E AVK ++N K+ EVE + + H
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHP 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYL 302
N+++L + +V E G L + + + ++I + Y+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 303 HEAIEPKVVHRDIKSSNILIDD---EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAP 359
H+ +VHRD+K NIL++ + + K+ DFGL+ + + R+ GT Y+AP
Sbjct: 138 HKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAP 192
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVE 403
E G +EK D++S GV+L ++G P YG+ NE ++++
Sbjct: 193 EVLR-GTYDEKCDVWSAGVILYILLSGTPPF-YGK--NEYDILK 232
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 22/214 (10%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL-LNNLGQAEKEFRVE-VEAIGHV 239
+AT+R+ +G G YG VYK R +G VA+K + + N G + V + +
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 240 R------HKNLVRLLGYCIEG-----VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEAR 288
R H N+VRL+ C + LV+E+V+ +L +L A L E
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKA--PPPGLPAETI 122
Query: 289 MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITT 348
++ + L +LH +VHRD+K NIL+ K++DFGLA++ + T
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LT 177
Query: 349 RVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
V+ T Y APE D++S G + E
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE 211
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 66
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 122
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 123 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 212
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 21/224 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV---EVEAIGHVRHK 242
R++ +LG+G +G V K + I E AVK ++N K+ EVE + + H
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHP 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYL 302
N+++L + +V E G L + + + ++I + Y+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 303 HEAIEPKVVHRDIKSSNILIDD---EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAP 359
H+ +VHRD+K NIL++ + + K+ DFGL+ + + R+ GT Y+AP
Sbjct: 138 HKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAP 192
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVE 403
E G +EK D++S GV+L ++G P YG+ NE ++++
Sbjct: 193 EVLR-GTYDEKCDVWSAGVILYILLSGTPPF-YGK--NEYDILK 232
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 21/224 (9%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV---EVEAIGHVRHK 242
R++ +LG+G +G V K + I E AVK ++N K+ EVE + + H
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHP 81
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYL 302
N+++L + +V E G L + + + ++I + Y+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 303 HEAIEPKVVHRDIKSSNILIDD---EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAP 359
H+ +VHRD+K NIL++ + + K+ DFGL+ + + R+ GT Y+AP
Sbjct: 138 HKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAP 192
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVE 403
E G +EK D++S GV+L ++G P YG+ NE ++++
Sbjct: 193 EVLR-GTYDEKCDVWSAGVILYILLSGTPPF-YGK--NEYDILK 232
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 56/292 (19%)
Query: 188 FSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNN-LGQAEKEFRVEVEAIGHVRHKNLV 245
F ++VLG G G +VY+G + + +VAVK++L A++E ++ E+ H N++
Sbjct: 26 FCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECFSFADREVQLLRESD---EHPNVI 81
Query: 246 RLLGYCIEGVHRMLVYEYVN----NGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
R +C E + ++Y+ L++++ ++ +L E + ++ T LA+
Sbjct: 82 RY--FCTEKDRQ---FQYIAIELCAATLQEYV--EQKDFAHLGLEP-ITLLQQTTSGLAH 133
Query: 302 LHEAIEPKVVHRDIKSSNILID-----DEFNAKVSDFGLAKLLDSGESHITTR--VMGTF 354
LH +VHRD+K NILI + A +SDFGL K L G + R V GT
Sbjct: 134 LHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 355 GYVAPEYANTGMLNEKS--------DIYSFGVLLLEAVT-GRDPVDYGRPANEVNLVEWL 405
G++APE ML+E DI+S G + ++ G P +G+ +L
Sbjct: 191 GWIAPE-----MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP--FGK-----SLQRQA 238
Query: 406 KMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVR 457
+++G + L + + R L+ + +DP +KRP V++
Sbjct: 239 NILLGACSLD-----CLHPEKHEDVIARELIEKMIAMDP--QKRPSAKHVLK 283
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 67
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 123
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 124 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 213
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 117/256 (45%), Gaps = 17/256 (6%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE--VAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNL 244
F+ +G+G +G V+KG + N ++ VA+K + L ++ + E+ + +
Sbjct: 29 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 245 VRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHE 304
+ G ++ ++ EY+ G+ L ++ + ++ K L YLH
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHS 142
Query: 305 AIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANT 364
K +HRDIK++N+L+ + K++DFG+A L + T V GT ++APE
Sbjct: 143 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQ 198
Query: 365 GMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEW--LKMMVG--TRRAEEVVDP 420
+ K+DI+S G+ +E G P P + L+ + G ++ +E V+
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA 258
Query: 421 NLEVKPATRALKRSLL 436
L +P+ R + LL
Sbjct: 259 CLNKEPSFRPTAKELL 274
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 92
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 148
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYVAP 359
LH ++HRD+K NIL++++ + +++DFG AK+L +S ++ + V GT YV+P
Sbjct: 149 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSP 204
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
E + SD+++ G ++ + V G P G
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 238
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 89
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 145
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 146 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 89
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 145
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 146 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI------QMELDHERMSYLLYQMLX 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAV------TGRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 73
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 130 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 219
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 186 NRFSAENVLGEGGYGVV---YKGRLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHV 239
R +G G YG V Y RL +VAVKKL +L A + +R E+ + H+
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHL 84
Query: 240 RHKNLVRLL-----GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+H+N++ LL IE + + + +L + ++ Q L+ E ++
Sbjct: 85 KHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADL----NNIVKCQA-LSDEHVQFLVYQ 139
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTF 354
+ L Y+H A ++HRD+K SN+ ++++ ++ DFGLA+ D T + T
Sbjct: 140 LLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATR 192
Query: 355 GYVAPEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
Y APE M N+ DI+S G ++ E + G+
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 92
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 148
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 149 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 238
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 89
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 145
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 146 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 94
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 150
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 151 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 240
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI------QMELDHERMSYLLYQMLX 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAV------TGRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 41/244 (16%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQ-AEKEFRVEVEAIGHVRHKN 243
N +E +LG G G VV++G G VAVK++L + A E ++ E+ H N
Sbjct: 15 NLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDDH---PN 70
Query: 244 LVRLLGYCIEGVHRMLVYEY-VNNGNLEQWLHGAMRNQGNLTWEAR---MKVIIGTAKAL 299
++R YC E R L + N NL+ + + NL + + ++ A +
Sbjct: 71 VIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 300 AYLHEAIEPKVVHRDIKSSNILI--------DDEFNAK-----VSDFGLAKLLDSGESHI 346
A+LH K++HRD+K NIL+ D + A+ +SDFGL K LDSG+
Sbjct: 129 AHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 347 TTRV---MGTFGYVAPEYANTG-------MLNEKSDIYSFGVLLLEAVT-GRDPV--DYG 393
+ GT G+ APE L DI+S G + ++ G+ P Y
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 394 RPAN 397
R +N
Sbjct: 246 RESN 249
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 88
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 144
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL--DSGESHITTRVMGTFGYVAP 359
LH ++HRD+K NIL++++ + +++DFG AK+L +S ++ + V GT YV+P
Sbjct: 145 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSP 200
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
E + SD+++ G ++ + V G P G
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 234
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + V R L E A+K L KE +V E + + + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 88
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 144
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 145 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 234
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 129/281 (45%), Gaps = 37/281 (13%)
Query: 194 LGEGGYGVVYKG--------RLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLV 245
LG+G + ++KG ++ +EV +K L + F + + HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 246 RLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEA 305
G C+ G +LV E+V G+L+ +L +N N+ W +++V A A+ +L E
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKN-KNCINILW--KLEVAKQLAAAMHFLEEN 132
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR----VMGTFGYVAPE- 360
++H ++ + NIL+ E + K + KL D G S IT + +V PE
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQERIPWVPPEC 188
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDP 420
N LN +D +SFG L E +G D +P + ++ ++R + +
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSGGD-----KPLSALD----------SQRKLQFYED 233
Query: 421 NLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
++ PA +A + + L+ C+D + + RP ++R L +
Sbjct: 234 RHQL-PAPKAAELANLIN-NCMDYEPDHRPSFRAIIRDLNS 272
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + VA+KKL N A++ +R E+ + V HK
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 76
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI------QMELDHERMSYLLYQMLX 130
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 131 GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 185
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAV------TGRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI------QMELDHERMSYLLYQMLC 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAV------TGRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 29/215 (13%)
Query: 194 LGEGGYGVVYKGRLING-SEVAVKKLLN-------------NLGQAEKEFRVEVEAIGHV 239
LG G YG V + NG SE A+K + N+ + +E E+ + +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNL-EQWLHGAMRNQGNLTWEARMKVIIGTAKA 298
H N+++L + + LV E+ G L EQ ++ ++ + MK I+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA--NIMKQILS---G 158
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDE---FNAKVSDFGLAKLLDSGESHITTRVMGTFG 355
+ YLH+ +VHRDIK NIL++++ N K+ DFGL+ S + + R +GT
Sbjct: 159 ICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF-SKDYKLRDR-LGTAY 213
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
Y+APE NEK D++S GV++ + G P
Sbjct: 214 YIAPEVLKKKY-NEKCDVWSCGVIMYILLCGYPPF 247
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 17/256 (6%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE--VAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNL 244
F+ +G+G +G V+KG + N ++ VA+K + L ++ + E+ + +
Sbjct: 24 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 245 VRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHE 304
+ G ++ ++ EY+ G+ L ++ + ++ K L YLH
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHS 137
Query: 305 AIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANT 364
K +HRDIK++N+L+ + K++DFG+A L + +GT ++APE
Sbjct: 138 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQ 193
Query: 365 GMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEW--LKMMVG--TRRAEEVVDP 420
+ K+DI+S G+ +E G P P + L+ + G ++ +E V+
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA 253
Query: 421 NLEVKPATRALKRSLL 436
L +P+ R + LL
Sbjct: 254 CLNKEPSFRPTAKELL 269
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V I VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLV 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTG 386
APE E DI+S GV++ E + G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 29/210 (13%)
Query: 193 VLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFR-VEVEAIGHVRHKNLVRLLGYC 251
+G+G YG V++G L +G VAVK + Q+ FR E+ +RH N++ +
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSW--FRETEIYNTVLLRHDNILGFIASD 71
Query: 252 I----EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI- 306
+ L+ Y +G+L +L + L +++ + A LA+LH I
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQ-----RQTLEPHLALRLAVSAACGLAHLHVEIF 126
Query: 307 ----EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI----TTRVMGTFGYVA 358
+P + HRD KS N+L+ ++D GLA + G ++ RV GT Y+A
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMA 185
Query: 359 PEYANTGMLNEK------SDIYSFGVLLLE 382
PE + + + +DI++FG++L E
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWE 215
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 39/282 (13%)
Query: 194 LGEGGYGVVYKG--------RLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLV 245
LG+G + ++KG ++ +EV +K L + F + + HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 246 RLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY-LHE 304
G C G +LV E+V G+L+ +L +N N+ W+ + AK LA+ +H
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKN-KNCINILWK------LEVAKQLAWAMHF 128
Query: 305 AIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR----VMGTFGYVAPE 360
E ++H ++ + NIL+ E + K + KL D G S IT + +V PE
Sbjct: 129 LEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQERIPWVPPE 187
Query: 361 -YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVD 419
N LN +D +SFG L E +G D +P + ++ ++R + +
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSGGD-----KPLSALD----------SQRKLQFYE 232
Query: 420 PNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEA 461
++ PA +A + + L+ C+D + + RP ++R L +
Sbjct: 233 DRHQL-PAPKAAELANLIN-NCMDYEPDHRPSFRAIIRDLNS 272
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 33/208 (15%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVE------------VEAIGHVRH 241
LGEG Y VYKG+ KL +NL A KE R+E V + ++H
Sbjct: 10 LGEGTYATVYKGK---------SKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKH 59
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII-GTAKALA 300
N+V L LV+EY++ +L+Q+L GN+ +K+ + + LA
Sbjct: 60 ANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDC----GNIINMHNVKLFLFQLLRGLA 114
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
Y H KV+HRD+K N+LI++ K++DFGLA+ V+ T Y P+
Sbjct: 115 YCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPD 170
Query: 361 -YANTGMLNEKSDIYSFGVLLLEAVTGR 387
+ + + D++ G + E TGR
Sbjct: 171 ILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSE--VAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNL 244
F+ +G+G +G V+KG + N ++ VA+K + L ++ + E+ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 245 VRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHE 304
+ G ++ ++ EY+ G+ L ++ + ++ K L YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHS 122
Query: 305 AIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANT 364
K +HRDIK++N+L+ + K++DFG+A L + +GT ++APE
Sbjct: 123 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQ 178
Query: 365 GMLNEKSDIYSFGVLLLEAVTGRDP 389
+ K+DI+S G+ +E G P
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPP 203
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V I VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLV 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTG 386
APE E DI+S GV++ E + G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + G VAVKKL N A++ +R E+ + V HK
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHK 81
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q +H + ++ RM ++
Sbjct: 82 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHE-------RMSYLLYQML 134
Query: 298 A-LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGY 356
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ + + + T + T Y
Sbjct: 135 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRYY 189
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTG 386
APE E DI+S G ++ E V G
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 38/222 (17%)
Query: 194 LGEGGYGVVYKG-RLINGSEVAVKKLLN---NLGQAEKEFRVEVEAIGHVR-HKNLVRLL 248
LG+G YG+V+K G VAVKK+ + N A++ FR E+ + + H+N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 249 GYCIEGVHR--MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
R LV++Y +E LH +R L + V+ K + YLH
Sbjct: 76 NVLRADNDRDVYLVFDY-----METDLHAVIR-ANILEPVHKQYVVYQLIKVIKYLHSG- 128
Query: 307 EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDS--------------------GESHI 346
++HRD+K SNIL++ E + KV+DFGL++ + + I
Sbjct: 129 --GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 347 TTRVMGTFGYVAPE-YANTGMLNEKSDIYSFGVLLLEAVTGR 387
T + T Y APE + + D++S G +L E + G+
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 194 LGEGGYGVVYKGRLINGS-EVAVKKLLN-NLGQAEKE-FRVEVEAIGHVRHKNLVRLLG- 249
+G G + VYKG + EVA +L + L ++E++ F+ E E + ++H N+VR
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 250 --------YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNL--TWEARMKVIIGTAKAL 299
CI +LV E +G L+ +L + + +W ++ K L
Sbjct: 94 WESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGL 142
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVA 358
+LH P ++HRD+K NI I + K+ D GLA L + V+GT + A
Sbjct: 143 QFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXA 198
Query: 359 PEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEV 399
PE +E D+Y+FG LE T P + A ++
Sbjct: 199 PEXYEE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQI 238
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 115/230 (50%), Gaps = 23/230 (10%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKGRLI--NGS--EVAVKKLLNNLGQAE--KEFRV 231
L D+ I +F+ +LG+G +G V + +L +GS +VAVK L ++ + +EF
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 232 EVEAIGHVRHKNLVRLLGYCIEGVHR------MLVYEYVNNGNLEQWLHGAM--RNQGNL 283
E + H ++ +L+G + + M++ ++ +G+L +L + N NL
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 284 TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGE 343
+ ++ ++ A + YL +HRD+ + N ++ ++ V+DFGL++ + SG+
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 344 SH---ITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDP 389
+ +++ ++A E + SD+++FGV + E +T G+ P
Sbjct: 192 YYRQGCASKL--PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 25/256 (9%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSEV--AVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLV 245
++ EN +G G +G V K + G+ + A KK+ + F+ E+E + + H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 246 RLLGYCIEGVHRMLVYEYVNNGNL-EQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHE 304
RL + LV E G L E+ +H + + + +++ A+AY H+
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-----RIMKDVLSAVAYCHK 124
Query: 305 AIEPKVVHRDIKSSNILI---DDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
V HRD+K N L + K+ DFGLA G+ + T+V GT YV+P+
Sbjct: 125 L---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-MMRTKV-GTPYYVSPQV 179
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPN 421
G+ + D +S GV++ + G P + P + + LK+ GT E
Sbjct: 180 LE-GLYGPECDEWSAGVMMYVLLCGYPP--FSAPTDXEVM---LKIREGTFTFPE--KDW 231
Query: 422 LEVKPATRALKRSLLV 437
L V P +L R LL
Sbjct: 232 LNVSPQAESLIRRLLT 247
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 25/256 (9%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSEV--AVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLV 245
++ EN +G G +G V K + G+ + A KK+ + F+ E+E + + H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 246 RLLGYCIEGVHRMLVYEYVNNGNL-EQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHE 304
RL + LV E G L E+ +H + + + +++ A+AY H+
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-----RIMKDVLSAVAYCHK 141
Query: 305 AIEPKVVHRDIKSSNILI---DDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEY 361
V HRD+K N L + K+ DFGLA G+ + T+V GT YV+P+
Sbjct: 142 L---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-MMRTKV-GTPYYVSPQV 196
Query: 362 ANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPN 421
G+ + D +S GV++ + G P + P + + LK+ GT E
Sbjct: 197 LE-GLYGPECDEWSAGVMMYVLLCGYPP--FSAPTDXEVM---LKIREGTFTFPE--KDW 248
Query: 422 LEVKPATRALKRSLLV 437
L V P +L R LL
Sbjct: 249 LNVSPQAESLIRRLLT 264
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 125/287 (43%), Gaps = 30/287 (10%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSEV-AVKKLLNNL-GQAEKEFRVEVE-AI 236
+ E+ + LG G YGVV K R + ++ AVK++ + Q +K +++ +
Sbjct: 28 NFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISX 87
Query: 237 GHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
V V G + E + + +L+++ + + + K+ +
Sbjct: 88 RTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 146
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFG 355
KAL +LH + V+HRD+K SN+LI+ K DFG++ L+D I G
Sbjct: 147 KALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA---GCKP 201
Query: 356 YVAPEYANTGM----LNEKSDIYSFGVLLLEAVTGRDPVD-YGRPANEVNLVEWLKMMVG 410
Y APE N + + KSDI+S G+ +E R P D +G P + LK +V
Sbjct: 202 YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQ------LKQVV- 254
Query: 411 TRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVR 457
E P L PA + + +C+ +S++RP ++ +
Sbjct: 255 -----EEPSPQL---PADKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLC 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAV------TGRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVE-VEAIGHVR 240
+AT+R+ +G G YG VYK R +G VA+K + + E+ + V + +R
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLR 58
Query: 241 ------HKNLVRLLGYCIEG-----VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
H N+VRL+ C + LV+E+V+ +L +L A L E
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKA--PPPGLPAETIK 115
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR 349
++ + L +LH +VHRD+K NIL+ K++DFGLA++ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LAP 170
Query: 350 VMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
V+ T Y APE D++S G + E
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE 203
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + VA+KKL N A++ +R E+ + V HK
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 84
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLC 138
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 139 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 193
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAV------TGRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 233
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVE-VEAIGHVR 240
+AT+R+ +G G YG VYK R +G VA+K + + E+ + V + +R
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLR 58
Query: 241 ------HKNLVRLLGYCIEG-----VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
H N+VRL+ C + LV+E+V+ +L +L A L E
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKA--PPPGLPAETIK 115
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR 349
++ + L +LH +VHRD+K NIL+ K++DFGLA++ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP-- 170
Query: 350 VMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
V+ T Y APE D++S G + E
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE 203
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLC 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAV------TGRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 194 LGEGGYGVVYK-GRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI 252
LG G +GVV++ G+ A K ++ ++ R E++ + +RH LV L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
+ +++YE+++ G L ++ + ++ + K L ++HE VH
Sbjct: 119 DDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVH 172
Query: 313 RDIKSSNILIDDEFNA--KVSDFGLAKLLDSGES-HITTRVMGTFGYVAPEYANTGMLNE 369
D+K NI+ + + K+ DFGL LD +S +TT GT + APE A +
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGY 229
Query: 370 KSDIYSFGVLLLEAVTGRDP 389
+D++S GVL ++G P
Sbjct: 230 YTDMWSVGVLSYILLSGLSP 249
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLC 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAV------TGRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + VA+KKL N A++ +R E+ + V HK
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 84
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLC 138
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 139 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 193
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAV------TGRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 233
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + VA+KKL N A++ +R E+ + V HK
Sbjct: 24 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 82
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLC 136
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 137 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 191
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAV------TGRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV-----EVEAIGHVRH 241
F +LGEG + R L E A+K L KE +V E + + + H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 89
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
V+L + Y NG L +++ R G+ AL Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 145
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 360
LH ++HRD+K NIL++++ + +++DFG AK+L +GT YV+PE
Sbjct: 146 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+ SD+++ G ++ + V G P G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + VA+KKL N A++ +R E+ + V HK
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 121
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLC 175
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 176 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 230
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAV------TGRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 270
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 194 LGEGGYGVVYK-GRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI 252
LG G +GVV++ G+ A K ++ ++ R E++ + +RH LV L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
+ +++YE+++ G L ++ + ++ + K L ++HE VH
Sbjct: 225 DDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVH 278
Query: 313 RDIKSSNILIDDEFNA--KVSDFGLAKLLDSGES-HITTRVMGTFGYVAPEYANTGMLNE 369
D+K NI+ + + K+ DFGL LD +S +TT GT + APE A +
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGY 335
Query: 370 KSDIYSFGVLLLEAVTGRDP 389
+D++S GVL ++G P
Sbjct: 336 YTDMWSVGVLSYILLSGLSP 355
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + VA+KKL N A++ +R E+ + V HK
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 76
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLC 130
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 131 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 185
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAV------TGRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + VA+KKL N A++ +R E+ + V HK
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 77
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLC 131
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 132 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 186
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAV------TGRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V I VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLC 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTG 386
APE E DI+S G ++ E + G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVE-VEAIGHVR 240
+AT+R+ +G G YG VYK R +G VA+K + + E+ + V + +R
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLR 58
Query: 241 ------HKNLVRLLGYCIEG-----VHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
H N+VRL+ C + LV+E+V+ +L +L A L E
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKA--PPPGLPAETIK 115
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR 349
++ + L +LH +VHRD+K NIL+ K++DFGLA++ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LDP 170
Query: 350 VMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLE 382
V+ T Y APE D++S G + E
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE 203
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + VA+KKL N A++ +R E+ + V HK
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 77
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLC 131
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 132 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 186
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAV------TGRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 41/236 (17%)
Query: 166 EISHLGWGHWFTLRDLEIATNRFSAENVLGEGGYGVV---YKGRLINGSEVAVKKLLNNL 222
E++ W RDL+ +G G YG V GR G++VA+KKL
Sbjct: 15 EVTKTAWEVRAVYRDLQ----------PVGSGAYGAVCSAVDGR--TGAKVAIKKLYRPF 62
Query: 223 GQ---AEKEFRVEVEAIGHVRHKNLVRLLGYCI------EGVHRMLVYEYVNNGNLEQWL 273
A++ +R E+ + H+RH+N++ LL + LV ++
Sbjct: 63 QSELFAKRAYR-ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTD------ 115
Query: 274 HGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDF 333
G + L + ++ K L Y+H A ++HRD+K N+ ++++ K+ DF
Sbjct: 116 LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 172
Query: 334 GLAKLLDSG-ESHITTRVMGTFGYVAPEYANTGM-LNEKSDIYSFGVLLLEAVTGR 387
GLA+ DS + TR Y APE M + DI+S G ++ E +TG+
Sbjct: 173 GLARQADSEMXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
+H N++ L +G H LV E + G L L +R + EA V+ K +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGEL---LDKILRQKFFSEREASF-VLHTIGKTV 134
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFN----AKVSDFGLAKLLDSGESHITTRVMGTFG 355
YLH VVHRD+K SNIL DE ++ DFG AK L + + T T
Sbjct: 135 EYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TAN 190
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+VAPE +E DI+S G+LL + G P G
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANG 228
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + VA+KKL N A++ +R E+ + V HK
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 121
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLC 175
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 176 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 230
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAV------TGRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 270
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 142/320 (44%), Gaps = 61/320 (19%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKL---LNNLGQAEKEFRVEVE 234
L++ +I + ++G+G +G VY GR EVA++ + +N Q K F+ EV
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRW--HGEVAIRLIDIERDNEDQL-KAFKREVM 81
Query: 235 AIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQG-----NLTWEARM 289
A RH+N+V +G C+ H ++ L+ +R+ N T +
Sbjct: 82 AYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT----LYSVVRDAKIVLDVNKTRQIAQ 137
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKV--SDFGL---AKLLDSGES 344
+++ K + YLH ++H+D+KS N+ D N KV +DFGL + +L +G
Sbjct: 138 EIV----KGMGYLHAK---GILHKDLKSKNVFYD---NGKVVITDFGLFSISGVLQAGRR 187
Query: 345 HITTRVM-GTFGYVAPEY---------ANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGR 394
R+ G ++APE + ++ SD+++ G + E + R+ +
Sbjct: 188 EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE-LHAREWPFKTQ 246
Query: 395 PANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQ 454
PA + W +M G + PNL + + LL C + E+RP ++
Sbjct: 247 PAEAII---W-QMGTGMK-------PNLSQIGMGKEISDILLF---CWAFEQEERPTFTK 292
Query: 455 VVRMLEADDYPFREDRRNRK 474
++ MLE + +RNR+
Sbjct: 293 LMDMLE------KLPKRNRR 306
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V I VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLC 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTG 386
APE E DI+S G ++ E + G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V I VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLC 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTG 386
APE E DI+S G ++ E + G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
+H N++ L +G H LV E + G L L +R + EA V+ K +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGEL---LDKILRQKFFSEREASF-VLHTIGKTV 134
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFN----AKVSDFGLAKLLDSGESHITTRVMGTFG 355
YLH VVHRD+K SNIL DE ++ DFG AK L + + T T
Sbjct: 135 EYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TAN 190
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
+VAPE +E DI+S G+LL + G P G
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANG 228
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 194 LGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQ---AEKEFRVEVEAIGHVRHKNLVRLLG 249
+G G YG V +G +VA+KKL A++ +R E+ + H++H+N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLD 108
Query: 250 YCIEGVHRMLVYE-YVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
Y+ Y+ ++ L M + + E ++ K L Y+H A
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGME--FSEEKIQYLVYQMLKGLKYIHSA--- 163
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES-HITTRVMGTFGYVAPEYANTGM- 366
VVHRD+K N+ ++++ K+ DFGLA+ D+ + ++ TR Y APE + M
Sbjct: 164 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMH 218
Query: 367 LNEKSDIYSFGVLLLEAVTGR 387
N+ DI+S G ++ E +TG+
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGK 239
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 27/239 (11%)
Query: 167 ISHLGWGHWFT--LRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNN--- 221
+ +L W FT ++ + + F V+G G +G V +L N +V K+LN
Sbjct: 53 LEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM 112
Query: 222 LGQAEKE-FRVEVEAIGHVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWL---HGA 276
L +AE FR E + + + K + L Y + + + LV +Y G+L L
Sbjct: 113 LKRAETACFREERDVLVNGDSK-WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR 171
Query: 277 MRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFG-L 335
+ + + A M + I + L Y VHRDIK NIL+D + +++DFG
Sbjct: 172 LPEEMARFYLAEMVIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSC 222
Query: 336 AKLLDSGESHITTRVMGTFGYVAPEYANT-----GMLNEKSDIYSFGVLLLEAVTGRDP 389
KL++ G + V GT Y++PE G + D +S GV + E + G P
Sbjct: 223 LKLMEDGTVQSSVAV-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V I VA+KKL N A++ +R E+ + V HK
Sbjct: 30 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 88
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 89 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLC 142
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 143 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 197
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT------GRDPVD 391
APE E D++S G ++ E V GRD +D
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 237
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 193 VLGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVR-HKNLVRLLGY 250
+LGEG Y V L NG E AVK + G + EVE + + +KN++ L+ +
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 251 CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKV 310
+ LV+E + G++ ++ Q + +V+ A AL +LH +
Sbjct: 80 FEDDTRFYLVFEKLQGGSI----LAHIQKQKHFNEREASRVVRDVAAALDFLHTK---GI 132
Query: 311 VHRDIKSSNILIDDEFN---AKVSDFGLAK--LLDSGESHITTRVM----GTFGYVAPEY 361
HRD+K NIL + K+ DF L L++ + ITT + G+ Y+APE
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 362 A-----NTGMLNEKSDIYSFGVLLLEAVTGRDP 389
+++ D++S GV+L ++G P
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V I VA+KKL N A++ +R E+ + V HK
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 77
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 78 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLC 131
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 132 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 186
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT------GRDPVD 391
APE E D++S G ++ E V GRD +D
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 226
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 193 VLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV--RHKNLVRLLGY 250
+G+G YG V++G G VAVK + + EK + E E V RH+N++ +
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIAS 99
Query: 251 CIEGVHR----MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+ H L+ Y G+L +L L + +++++ A LA+LH I
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 307 -----EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL-------LDSGESHITTRVMGTF 354
+P + HRD+KS NIL+ ++D GLA + LD G + RV GT
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN---PRV-GTK 210
Query: 355 GYVAPEYANTGML------NEKSDIYSFGVLLLE 382
Y+APE + + ++ DI++FG++L E
Sbjct: 211 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 244
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQAEKEFR---VEVEAIG 237
++ N F +LG+G +G V+ G A+K L + A+ E E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 238 HVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
+ RH L L Y + R+ V EY N G L + H + + T E
Sbjct: 61 NTRHPFLT-ALKYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIV 115
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGY 356
AL YLH VV+RDIK N+++D + + K++DFGL K S + + T GT Y
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEY 171
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
+APE D + GV++ E + GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 193 VLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV--RHKNLVRLLGY 250
+G+G YG V++G G VAVK + + EK + E E V RH+N++ +
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 251 CIEGVHR----MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+ H L+ Y G+L +L + + +++++ A LA+LH I
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEI 125
Query: 307 -----EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL-------LDSGESHITTRVMGTF 354
+P + HRD+KS NIL+ ++D GLA + LD G + RV GT
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN---PRV-GTK 181
Query: 355 GYVAPEYANTGML------NEKSDIYSFGVLLLE 382
Y+APE + + ++ DI++FG++L E
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 215
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V I VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLC 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTG 386
APE E DI+S G ++ E + G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V I VA+KKL N A++ +R E+ + V HK
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 84
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLC 138
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 139 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 193
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTG 386
APE E DI+S G ++ E + G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQAEKEFR---VEVEAIG 237
++ N F +LG+G +G V+ G A+K L + A+ E E +
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 238 HVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
+ RH L L Y + R+ V EY N G L + H + + T E
Sbjct: 64 NTRHPFLT-ALKYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIV 118
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGY 356
AL YLH VV+RDIK N+++D + + K++DFGL K S + + T GT Y
Sbjct: 119 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEY 174
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
+APE D + GV++ E + GR P
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 193 VLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHV--RHKNLVRLLGY 250
+G+G YG V++G G VAVK + + EK + E E V RH+N++ +
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 251 CIEGVHR----MLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
+ H L+ Y G+L +L + + +++++ A LA+LH I
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEI 125
Query: 307 -----EPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL-------LDSGESHITTRVMGTF 354
+P + HRD+KS NIL+ ++D GLA + LD G + RV GT
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN---PRV-GTK 181
Query: 355 GYVAPEYANTGML------NEKSDIYSFGVLLLE 382
Y+APE + + ++ DI++FG++L E
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 215
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V I VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLC 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTG 386
APE E DI+S G ++ E + G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V I VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLV 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTG 386
APE E DI+S G ++ E + G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 194 LGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQ---AEKEFRVEVEAIGHVRHKNLVRLLG 249
+G G YG V +G +VA+KKL A++ +R E+ + H++H+N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLD 90
Query: 250 YCIEGVHRMLVYE-YVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
Y+ Y+ ++ L M + + E ++ K L Y+H A
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK--FSEEKIQYLVYQMLKGLKYIHSA--- 145
Query: 309 KVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGES-HITTRVMGTFGYVAPEYANTGM- 366
VVHRD+K N+ ++++ K+ DFGLA+ D+ + ++ TR Y APE + M
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMH 200
Query: 367 LNEKSDIYSFGVLLLEAVTGR 387
N+ DI+S G ++ E +TG+
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGK 221
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 16/212 (7%)
Query: 186 NRFSAENVLGEGGYGVVYK-----GRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
R+ LG+GG+ Y+ + + +V K +L Q EK E+ +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLD 100
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
+ ++V G+ + +V E +L + LH R + EAR + T + +
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHK--RRKAVTEPEARY-FMRQTIQGVQ 156
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYVAP 359
YLH +V+HRD+K N+ ++D+ + K+ DFGLA K+ GE T + GT Y+AP
Sbjct: 157 YLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAP 211
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
E + + DI+S G +L + G+ P +
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 182 EIATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQAEKEFR---VEVEAIG 237
++ N F +LG+G +G V+ G A+K L + A+ E E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 238 HVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
+ RH L L Y + R+ V EY N G L + H + + T E
Sbjct: 61 NTRHPFLT-ALKYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIV 115
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGY 356
AL YLH VV+RDIK N+++D + + K++DFGL K S + + T GT Y
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEY 171
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
+APE D + GV++ E + GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 17/212 (8%)
Query: 194 LGEGGYGVVYKGRLINGSE-VAVKKLL---NNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
+GEG YG V+K + E VA+K++ ++ G R E+ + ++HKN+VRL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLHD 68
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
LV+E+ + +L+++ G+L E + K L + H
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNE 369
V+HRD+K N+LI+ K++DFGLA+ + V+ T Y P+ L
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 370 KS-DIYSFGVLLLEAVTGRDPVDYGRPANEVN 400
S D++S G + E P+ P N+V+
Sbjct: 181 TSIDMWSAGCIFAELANAARPL---FPGNDVD 209
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V I VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLC 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTG 386
APE E DI+S G ++ E + G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 94/218 (43%), Gaps = 18/218 (8%)
Query: 180 DLEIATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQAEKEFR---VEVEA 235
D ++ N F +LG+G +G V+ G A+K L + A+ E E
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 63
Query: 236 IGHVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+ + RH L L Y + R+ V EY N G L + H + + T E
Sbjct: 64 LQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAE 118
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITT--RVMG 352
AL YLH VV+RDIK N+++D + + K++DFGL K G S T G
Sbjct: 119 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCG 172
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
T Y+APE D + GV++ E + GR P
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 107/211 (50%), Gaps = 17/211 (8%)
Query: 180 DLEIATNRFSAENVLGEGGYGVVYKGRLINGSE-VAVKKL-LNNLGQAE----KEFRVEV 233
D++ R+ + LGEG + VYK R N ++ VA+KK+ L + +A+ + E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKV-I 292
+ + + H N++ LL + LV+++ +E L +++ + + +K +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDF-----METDLEVIIKDNSLVLTPSHIKAYM 118
Query: 293 IGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMG 352
+ T + L YLH+ ++HRD+K +N+L+D+ K++DFGLAK S +V+
Sbjct: 119 LMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV- 174
Query: 353 TFGYVAPEYA-NTGMLNEKSDIYSFGVLLLE 382
T Y APE M D+++ G +L E
Sbjct: 175 TRWYRAPELLFGARMYGVGVDMWAVGCILAE 205
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 193 VLGEGGYGVVYKGRLINGSEV-AVKKLLNNLGQAEKEFR---VEVEAIGHVRHKNLVRLL 248
VLG+G +G V E+ AVK L ++ + + VE + + L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 249 GYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIE 307
C + + R+ V EYVN G+L + R + ++ IG L +L
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFFLQSK-- 461
Query: 308 PKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVM-GTFGYVAPEYANTGM 366
+++RD+K N+++D E + K++DFG+ K ++ +TT+ GT Y+APE
Sbjct: 462 -GIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQP 518
Query: 367 LNEKSDIYSFGVLLLEAVTGRDPVD 391
+ D ++FGVLL E + G+ P +
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 130/292 (44%), Gaps = 41/292 (14%)
Query: 194 LGEGGYGVV--YKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYC 251
LGEGG+ V +G L +G A+K++L + Q +E + E + H N++RL+ YC
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 252 IE---GVHRM-LVYEYVNNGNLEQWLHGAMRNQGN-LTWEARMKVIIGTAKALAYLHEAI 306
+ H L+ + G L + ++++GN LT + + +++G + L EAI
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIE-RLKDKGNFLTEDQILWLLLGICRGL----EAI 150
Query: 307 EPK-VVHRDIKSSNILIDDEFNAKVSDFG---LAKLLDSGESHITT-----RVMGTFGYV 357
K HRD+K +NIL+ DE + D G A + G T T Y
Sbjct: 151 HAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 358 APEYANT---GMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
APE + +++E++D++S G +L + G P D + G A
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD-------------MVFQKGDSVA 257
Query: 415 EEVVDP-NLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLEADDYP 465
V + ++ P + LL ++ VDP +RP + ++ LEA P
Sbjct: 258 LAVQNQLSIPQSPRHSSALWQLLNSMMTVDP--HQRPHIPLLLSQLEALQPP 307
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 185 TNRFSAENVLGEGGYGVVYKGRLINGS---EVAVKKLLNNLGQAEKEFRVEVEAI-GHVR 240
T+ + + +G G Y V R I+ + E AVK + +++++ E+E + + +
Sbjct: 21 TDGYEVKEDIGVGSYSVC--KRCIHKATNMEFAVKII----DKSKRDPTEEIEILLRYGQ 74
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H N++ L +G + +V E + G L L +R + EA V+ K +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGEL---LDKILRQKFFSEREAS-AVLFTITKTVE 130
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEF----NAKVSDFGLAKLLDSGESHITTRVMGTFGY 356
YLH VVHRD+K SNIL DE + ++ DFG AK L + + T T +
Sbjct: 131 YLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANF 186
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
VAPE + DI+S GVLL +TG P G
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANG 223
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 39/253 (15%)
Query: 192 NVLGEGGYGVVYKGRLINGSEVAVKKLLNN---LGQAEKEFRVEVEAIGHVRHKNLVRLL 248
++LG+G V++GR ++ K+ NN L + + R E E + + HKN+V+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR-EFEVLKKLNHKNIVKLF 73
Query: 249 GYCIEGV--HRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
E H++L+ E+ G+ L+ + N + +I + ++
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGS----LYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 307 EPKVVHRDIKSSNILI----DDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYA 362
E +VHR+IK NI+ D + K++DFG A+ L+ E ++ + GT Y+ P+
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMY 187
Query: 363 NTGMLNEKS--------DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
+L + D++S GV A TG P RP G RR
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF---RPFE------------GPRRN 232
Query: 415 EEVVDPNLEVKPA 427
+EV+ + KP+
Sbjct: 233 KEVMYKIITGKPS 245
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 185 TNRFSAENVLGEGGYGVVYKGRLINGS---EVAVKKLLNNLGQAEKEFRVEVEAI-GHVR 240
T+ + + +G G Y V R I+ + E AVK + +++++ E+E + + +
Sbjct: 21 TDGYEVKEDIGVGSYSVC--KRCIHKATNXEFAVKII----DKSKRDPTEEIEILLRYGQ 74
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
H N++ L +G + +V E G L L +R + EA V+ K +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGEL---LDKILRQKFFSEREASA-VLFTITKTVE 130
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEF----NAKVSDFGLAKLLDSGESHITTRVMGTFGY 356
YLH VVHRD+K SNIL DE + ++ DFG AK L + + T T +
Sbjct: 131 YLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANF 186
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
VAPE + DI+S GVLL +TG P G
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANG 223
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 187 RFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V + G VAVKKL N A++ +R E+ + V HK
Sbjct: 25 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q +H + ++ RM ++
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHE-------RMSYLLYQML 136
Query: 298 A-LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGY 356
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ + + + T + T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRYY 191
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTG 386
APE DI+S G ++ E V G
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 121/295 (41%), Gaps = 53/295 (17%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKLLNN--LGQAEKEFRV---- 231
+D E + +LG+GG+G V+ G RL + +VA+K + N LG + V
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 232 EVEAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEA 287
EV + V H ++RLL + MLV E Q L + +G L E
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPA---QDLFDYITEKGPLG-EG 139
Query: 288 RMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHI 346
+ G + +A + VVHRDIK NILID AK+ DFG LL
Sbjct: 140 PSRCFFG--QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEP 194
Query: 347 TTRVMGTFGYVAPEYANTGMLNE-KSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWL 405
T GT Y PE+ + + + ++S G+LL + V G P +
Sbjct: 195 YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE-------------- 240
Query: 406 KMMVGTRRAEEVVDPNL----EVKPATRALKRSLLVALRCVDPDSEKRPKMSQVV 456
R +E+++ L V P AL R RC+ P RP + +++
Sbjct: 241 -------RDQEILEAELHFPAHVSPDCCALIR------RCLAPKPSSRPSLEEIL 282
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 29/253 (11%)
Query: 194 LGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQAEKEFRVEVEA--IGHVRHKNLVRLLGY 250
LG+G + VV + +++ G E A K + A ++E EA ++H N+VRL
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 251 CIEGVHRMLVYEYVNNGNL-EQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
E H L+++ V G L E + ++ + + I +A+ + H+
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILEAVLHCHQM---G 141
Query: 310 VVHRDIKSSNILIDDEFNA---KVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGM 366
VVHRD+K N+L+ + K++DFGLA ++ GE GT GY++PE
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 367 LNEKSDIYSFGVLLLEAVTGRDPV---DYGRPANEVNL-------VEWLKMMVGTRRAEE 416
+ D+++ GV+L + G P D R ++ EW + T A++
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV---TPEAKD 257
Query: 417 VVDPNLEVKPATR 429
+++ L + P+ R
Sbjct: 258 LINKMLTINPSKR 270
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 182 EIATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQAEKEFR---VEVEAIG 237
++ N F +LG+G +G V+ G A+K L + A+ E E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 238 HVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
+ RH L L Y + R+ V EY N G L + H + + T E
Sbjct: 61 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIV 115
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITT--RVMGTF 354
AL YLH VV+RDIK N+++D + + K++DFGL K G S T GT
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTP 169
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
Y+APE D + GV++ E + GR P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 194 LGEGGYGVVYKGRLI-NGSEVAVKKLL------NNLGQAEKEFRVEVEAIGHVRHKNLVR 246
LG G + +V K R G E A K + + G + +E EV + +RH N++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L +L+ E V+ G L +L + +LT + + + + YLH
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFLKQILDGVHYLHSK- 134
Query: 307 EPKVVHRDIKSSNILIDDEF----NAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYA 362
++ H D+K NI++ D+ K+ DFG+A +++G + GT +VAPE
Sbjct: 135 --RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIV 190
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRDP 389
N L ++D++S GV+ ++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 113/274 (41%), Gaps = 32/274 (11%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVK--KLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYC 251
L E G ++KGR G+++ VK K+ + + ++F E + H N++ +LG C
Sbjct: 18 LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 252 --IEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
H L+ + G+L LH + + +K + A+ A+LH +EP
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQS--QAVKFALDXARGXAFLH-TLEPL 133
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLDS-GESHITTRVMGTFGYVAPEYANTGMLN 368
+ + S ++ ID++ A++S + S G + V PE N
Sbjct: 134 IPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTN----R 189
Query: 369 EKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPNLE--VKP 426
+D +SF VLL E VT EV + +G + A E + P + + P
Sbjct: 190 RSADXWSFAVLLWELVT-----------REVPFADLSNXEIGXKVALEGLRPTIPPGISP 238
Query: 427 ATRALKRSLLVALRCVDPDSEKRPKMSQVVRMLE 460
L + C + D KRPK +V +LE
Sbjct: 239 HVSKLXKI------CXNEDPAKRPKFDXIVPILE 266
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 194 LGEGGYGVVYKGRLI-NGSEVAVKKLL------NNLGQAEKEFRVEVEAIGHVRHKNLVR 246
LG G + +V K R G E A K + + G + +E EV + +RH N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L +L+ E V+ G L +L + +LT + + + + YLH
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLA----EKESLTEDEATQFLKQILDGVHYLHSK- 127
Query: 307 EPKVVHRDIKSSNILIDDEF----NAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYA 362
++ H D+K NI++ D+ K+ DFG+A +++G + GT +VAPE
Sbjct: 128 --RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIV 183
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRDP 389
N L ++D++S GV+ ++G P
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 186 NRFSAENVLGEGGYGVVYK-----GRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
R+ LG+GG+ Y+ + + +V K +L Q EK E+ +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLD 100
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
+ ++V G+ + +V E +L + LH R + EAR + T + +
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHK--RRKAVTEPEARY-FMRQTIQGVQ 156
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYVAP 359
YLH +V+HRD+K N+ ++D+ + K+ DFGLA K+ GE + GT Y+AP
Sbjct: 157 YLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGTPNYIAP 211
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
E + + DI+S G +L + G+ P +
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 18/215 (8%)
Query: 182 EIATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQAEKEFR---VEVEAIG 237
++ N F +LG+G +G V+ G A+K L + A+ E E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 238 HVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
+ RH L L Y + R+ V EY N G L + H + + T E
Sbjct: 61 NTRHPFLT-ALKYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIV 115
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITT--RVMGTF 354
AL YLH VV+RDIK N+++D + + K++DFGL K G S T GT
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTP 169
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
Y+APE D + GV++ E + GR P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 19/212 (8%)
Query: 188 FSAENVLGEGGYGVVYKGRLINGSEV-AVKKLLNNLGQAEKEFR---VEVEAIGHVRHKN 243
F+ VLG+G +G V E+ AVK L ++ + + VE +
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 244 LVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLH--GAMRNQGNLTWEARMKVIIGTAKALA 300
+ L C + + R+ V EYVN G+L + G + + + A + + L
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI------GLF 135
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVM-GTFGYVAP 359
+L +++RD+K N+++D E + K++DFG+ K ++ +TT+ GT Y+AP
Sbjct: 136 FLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAP 190
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
E + D ++FGVLL E + G+ P +
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 18/215 (8%)
Query: 182 EIATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQAEKEFR---VEVEAIG 237
++ N F +LG+G +G V+ G A+K L + A+ E E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 238 HVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
+ RH L L Y + R+ V EY N G L + H + + T E
Sbjct: 61 NTRHPFLT-ALKYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIV 115
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITT--RVMGTF 354
AL YLH VV+RDIK N+++D + + K++DFGL K G S T GT
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTP 169
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
Y+APE D + GV++ E + GR P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V I VA+KKL N A++ +R E+ + V HK
Sbjct: 27 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 85
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLC 139
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + + T Y
Sbjct: 140 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRYYR 194
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTG 386
APE E DI+S G ++ E + G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V I VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLC 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT------GRDPVD 391
APE E DI+S G ++ E V GRD +D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYID 232
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 184 ATNRF---SAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKE-FRVEVEAIGHV 239
A N F S +LG G +G V+K K++ G +KE + E+ + +
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 240 RHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
H NL++L +LV EYV+ G L + N L MK I + +
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQI---CEGI 200
Query: 300 AYLHEAIEPKVVHRDIKSSNILI--DDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
++H+ ++H D+K NIL D K+ DFGLA+ E GT ++
Sbjct: 201 RHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN--FGTPEFL 255
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
APE N ++ +D++S GV+ ++G P
Sbjct: 256 APEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 42/284 (14%)
Query: 169 HLGWGHWFTLRDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQAEK 227
+G G F + ++ + + LG+G + VV + G E A K ++N + +
Sbjct: 12 QMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK-IINTKKLSAR 70
Query: 228 EF-RVEVEA--IGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNL-EQWLHGAMRNQGNL 283
+F ++E EA ++H N+VRL E LV++ V G L E + ++ +
Sbjct: 71 DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA 130
Query: 284 TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNA---KVSDFGLAKLLD 340
+ I +++AY H +VHR++K N+L+ + K++DFGLA ++
Sbjct: 131 S-----HCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IE 180
Query: 341 SGESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV---------- 390
+S GT GY++PE ++ DI++ GV+L + G P
Sbjct: 181 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA 240
Query: 391 -----DYGRPANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATR 429
Y P+ E + V T A+ ++D L V P R
Sbjct: 241 QIKAGAYDYPSPEWDTV--------TPEAKSLIDSMLTVNPKKR 276
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 186 NRFSAENVLGEGGYGVVYK-----GRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
R+ LG+GG+ Y+ + + +V K +L Q EK E+ +
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLD 84
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
+ ++V G+ + +V E +L + LH R + EAR + T + +
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHK--RRKAVTEPEARY-FMRQTIQGVQ 140
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYVAP 359
YLH +V+HRD+K N+ ++D+ + K+ DFGLA K+ GE + GT Y+AP
Sbjct: 141 YLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAP 195
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
E + + DI+S G +L + G+ P +
Sbjct: 196 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 194 LGEGGYGVVYKGRLI-NGSEVAVKKLL------NNLGQAEKEFRVEVEAIGHVRHKNLVR 246
LG G + +V K R G E A K + + G + +E EV + +RH N++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L +L+ E V+ G L +L + +LT + + + + YLH
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLA----EKESLTEDEATQFLKQILDGVHYLHSK- 148
Query: 307 EPKVVHRDIKSSNILIDDEF----NAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYA 362
++ H D+K NI++ D+ K+ DFG+A +++G + GT +VAPE
Sbjct: 149 --RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIV 204
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRDP 389
N L ++D++S GV+ ++G P
Sbjct: 205 NYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 186 NRFSAENVLGEGGYGVVYK-----GRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVR 240
R+ LG+GG+ Y+ + + +V K +L Q EK E+ +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLD 100
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
+ ++V G+ + +V E +L + LH R + EAR + T + +
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHK--RRKAVTEPEARY-FMRQTIQGVQ 156
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYVAP 359
YLH +V+HRD+K N+ ++D+ + K+ DFGLA K+ GE + GT Y+AP
Sbjct: 157 YLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAP 211
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
E + + DI+S G +L + G+ P +
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEK------EFRVEVEAIGHVRHKNLVR 246
LG G + +V K R G E A K + +A + E EV + V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L +L+ E V+ G L +L + +L+ E I + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLA----QKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 307 EPKVVHRDIKSSNILIDDEF----NAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYA 362
K+ H D+K NI++ D+ + K+ DFGLA ++ G + GT +VAPE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRDP 389
N L ++D++S GV+ ++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 110/253 (43%), Gaps = 39/253 (15%)
Query: 192 NVLGEGGYGVVYKGRLINGSEVAVKKLLNN---LGQAEKEFRVEVEAIGHVRHKNLVRLL 248
++LG+G V++GR ++ K+ NN L + + R E E + + HKN+V+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR-EFEVLKKLNHKNIVKLF 73
Query: 249 GYCIEGV--HRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
E H++L+ E+ G+ L+ + N + +I + ++
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGS----LYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 307 EPKVVHRDIKSSNILI----DDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYA 362
E +VHR+IK NI+ D + K++DFG A+ L+ E + + GT Y+ P+
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGTEEYLHPDMY 187
Query: 363 NTGMLNEKS--------DIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRA 414
+L + D++S GV A TG P RP G RR
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF---RP------------FEGPRRN 232
Query: 415 EEVVDPNLEVKPA 427
+EV+ + KP+
Sbjct: 233 KEVMYKIITGKPS 245
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
E+ + +F+ E G+ Y + I + G + ++ EV + ++H
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR----GVSREDIEREVSILKEIQH 73
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
N++ L +L+ E V G L +L + +LT E + + + Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDD----EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
LH ++ H D+K NI++ D + K+ DFGLA +D G + GT +V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPAFV 184
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
APE N L ++D++S GV+ ++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 22/239 (9%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH-KNLVRLLGYCI 252
LG G Y V++ I +E V K+L + + + + E++ + ++R N++ L
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKK--NKIKREIKILENLRGGPNIITLADIVK 102
Query: 253 EGVHRM--LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKV 310
+ V R LV+E+VNN + +Q Q ++ R + KAL Y H +
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLY------QTLTDYDIRF-YMYEILKALDYCHSM---GI 152
Query: 311 VHRDIKSSNILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLN 368
+HRD+K N++ID E ++ D+GLA+ G+ + RV + + PE + M +
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYD 210
Query: 369 EKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDP-NLEVKP 426
D++S G +L + ++P +G N LV K++ GT + +D N+E+ P
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGH-DNYDQLVRIAKVL-GTEDLYDYIDKYNIELDP 267
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 17/212 (8%)
Query: 194 LGEGGYGVVYKGRLINGSE-VAVKKLL---NNLGQAEKEFRVEVEAIGHVRHKNLVRLLG 249
+GEG YG V+K + E VA+K++ ++ G R E+ + ++HKN+VRL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLHD 68
Query: 250 YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPK 309
LV+E+ + +L+++ G+L E + K L + H
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNE 369
V+HRD+K N+LI+ K+++FGLA+ + V+ T Y P+ L
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 370 KS-DIYSFGVLLLEAVTGRDPVDYGRPANEVN 400
S D++S G + E P+ P N+V+
Sbjct: 181 TSIDMWSAGCIFAELANAGRPL---FPGNDVD 209
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 183 IATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQAEKEFR---VEVEAIGH 238
+ N F +LG+G +G V+ G A+K L + A+ E E + +
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 239 VRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVI-IGTA 296
RH L L Y + R+ V EY N G L + H ++ + E R +
Sbjct: 205 SRHPFLT-ALKYSFQTHDRLCFVMEYANGGEL--FFH---LSRERVFSEDRARFYGAEIV 258
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL-LDSGESHITTRVMGTFG 355
AL YLH E VV+RD+K N+++D + + K++DFGL K + G + T GT
Sbjct: 259 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPE 314
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
Y+APE D + GV++ E + GR P
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 183 IATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQAEKEFR---VEVEAIGH 238
+ N F +LG+G +G V+ G A+K L + A+ E E + +
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 239 VRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVI-IGTA 296
RH L L Y + R+ V EY N G L + H ++ + E R +
Sbjct: 208 SRHPFLT-ALKYSFQTHDRLCFVMEYANGGEL--FFH---LSRERVFSEDRARFYGAEIV 261
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL-LDSGESHITTRVMGTFG 355
AL YLH E VV+RD+K N+++D + + K++DFGL K + G + T GT
Sbjct: 262 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPE 317
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
Y+APE D + GV++ E + GR P
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 187 RFSAENVLGEGGYGVVYKGR-LINGSEVAVKKL---LNNLGQAEKEFRVEVEAIGHVRHK 242
R+ +G G G+V I VA+KKL N A++ +R E+ + V HK
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 243 NLVRLLGY-----CIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
N++ LL +E + + + + NL Q + Q L E ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLC 137
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ +LH A ++HRD+K SNI++ + K+ DFGLA+ +G S + + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYR 192
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVT------GRDPVD 391
APE E D++S G ++ E V GRD +D
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 232
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 180 DLEIATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQAEKEFR---VEVEA 235
D + N F +LG+G +G V+ G A+K L + A+ E E
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 63
Query: 236 IGHVRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
+ + RH L L Y + R+ V EY N G L + H ++ + E R +
Sbjct: 64 LQNSRHPFLT-ALKYSFQTHDRLCFVMEYANGGEL--FFH---LSRERVFSEDRARFYGA 117
Query: 295 -TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL-LDSGESHITTRVMG 352
AL YLH E VV+RD+K N+++D + + K++DFGL K + G + G
Sbjct: 118 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCG 173
Query: 353 TFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
T Y+APE D + GV++ E + GR P
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 18/221 (8%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKE----FRVEV 233
+R L++ + V+G G +G V R +V KLL+ ++ F E
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEER 126
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ + +V+L + + +V EY+ G+L M N A+
Sbjct: 127 DIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN----LMSNYDVPEKWAKFY--- 179
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMG 352
TA+ + L ++HRD+K N+L+D + K++DFG K+ ++G H T V G
Sbjct: 180 -TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-G 237
Query: 353 TFGYVAPEYANT----GMLNEKSDIYSFGVLLLEAVTGRDP 389
T Y++PE + G + D +S GV L E + G P
Sbjct: 238 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 118/268 (44%), Gaps = 42/268 (15%)
Query: 185 TNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQAEKEF-RVEVEA--IGHVR 240
++ + + LG+G + VV + G E A K ++N + ++F ++E EA ++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK-IINTKKLSARDFQKLEREARICRKLQ 63
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNL-EQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
H N+VRL E LV++ V G L E + ++ + + I +++
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESI 118
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNA---KVSDFGLAKLLDSGESHITTRVMGTFGY 356
AY H +VHR++K N+L+ + K++DFGLA ++ +S GT GY
Sbjct: 119 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGY 173
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV---------------DYGRPANEVNL 401
++PE ++ DI++ GV+L + G P Y P+ E +
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT 233
Query: 402 VEWLKMMVGTRRAEEVVDPNLEVKPATR 429
V T A+ ++D L V P R
Sbjct: 234 V--------TPEAKSLIDSMLTVNPKKR 253
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 25/261 (9%)
Query: 185 TNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNL 244
++R+ +G G +GV R +E+ K + + ++ + E+ +RH N+
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI 76
Query: 245 VRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM---KVIIGTAKALAY 301
VR + H +V EY + G L + + A R + EAR ++I G ++Y
Sbjct: 77 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED---EARFFFQQLISG----VSY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNA--KVSDFGLAKLLDSGESHITTR-VMGTFGYVA 358
H +V HRD+K N L+D K+ DFG +K S H + +GT Y+A
Sbjct: 130 CHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIA 183
Query: 359 PEYANTGMLNEK-SDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV 417
PE + K +D++S GV L + G P + P N + + ++ + A
Sbjct: 184 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNFRKTIHRILNVQYA--- 238
Query: 418 VDPNLEVKPATRALKRSLLVA 438
+ + + P R L + VA
Sbjct: 239 IPDYVHISPECRHLISRIFVA 259
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
E+ + +F+ E G+ Y + I + G + ++ EV + ++H
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR----GVSREDIEREVSILKEIQH 73
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
N++ L +L+ E V G L +L + +LT E + + + Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDD----EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
LH ++ H D+K NI++ D + K+ DFGLA +D G + GT +V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
APE N L ++D++S GV+ ++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 194 LGEGGYGVVYK-----GRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+GG+ ++ + + ++ K LL Q EK +E+ + H+++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 87
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM---KVIIGTAKALAYLHEA 305
G+ + +V E +L + LH R + EAR ++++G YLH
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLE-LHK--RRKALTEPEARYYLRQIVLGCQ----YLHRN 140
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYVAPEYANT 364
+V+HRD+K N+ ++++ K+ DFGLA K+ GE T + GT Y+APE +
Sbjct: 141 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSK 195
Query: 365 GMLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ + D++S G ++ + G+ P +
Sbjct: 196 KGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 194 LGEGGYGVVYK-----GRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+GG+ ++ + + ++ K LL Q EK +E+ + H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 83
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM---KVIIGTAKALAYLHEA 305
G+ + +V E +L + LH R + EAR ++++G YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHK--RRKALTEPEARYYLRQIVLGCQ----YLHRN 136
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYVAPEYANT 364
+V+HRD+K N+ ++++ K+ DFGLA K+ GE T + GT Y+APE +
Sbjct: 137 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSK 191
Query: 365 GMLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ + D++S G ++ + G+ P +
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 118/268 (44%), Gaps = 42/268 (15%)
Query: 185 TNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQAEKEF-RVEVEA--IGHVR 240
++ + + LG+G + VV + G E A K ++N + ++F ++E EA ++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK-IINTKKLSARDFQKLEREARICRKLQ 63
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNL-EQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
H N+VRL E LV++ V G L E + ++ + + I +++
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESI 118
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNA---KVSDFGLAKLLDSGESHITTRVMGTFGY 356
AY H +VHR++K N+L+ + K++DFGLA ++ +S GT GY
Sbjct: 119 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGY 173
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV---------------DYGRPANEVNL 401
++PE ++ DI++ GV+L + G P Y P+ E +
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT 233
Query: 402 VEWLKMMVGTRRAEEVVDPNLEVKPATR 429
V T A+ ++D L V P R
Sbjct: 234 V--------TPEAKSLIDSMLTVNPKKR 253
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 194 LGEGGYGVVYK-----GRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+GG+ ++ + + ++ K LL Q EK +E+ + H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 83
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM---KVIIGTAKALAYLHEA 305
G+ + +V E +L + LH R + EAR ++++G YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHK--RRKALTEPEARYYLRQIVLGCQ----YLHRN 136
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYVAPEYANT 364
+V+HRD+K N+ ++++ K+ DFGLA K+ GE T + GT Y+APE +
Sbjct: 137 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSK 191
Query: 365 GMLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ + D++S G ++ + G+ P +
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 118/268 (44%), Gaps = 42/268 (15%)
Query: 185 TNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQAEKEF-RVEVEA--IGHVR 240
++ + + LG+G + VV + G E A K ++N + ++F ++E EA ++
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK-IINTKKLSARDFQKLEREARICRKLQ 62
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNL-EQWLHGAMRNQGNLTWEARMKVIIGTAKAL 299
H N+VRL E LV++ V G L E + ++ + + I +++
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESI 117
Query: 300 AYLHEAIEPKVVHRDIKSSNILIDDEFNA---KVSDFGLAKLLDSGESHITTRVMGTFGY 356
AY H +VHR++K N+L+ + K++DFGLA ++ +S GT GY
Sbjct: 118 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGY 172
Query: 357 VAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV---------------DYGRPANEVNL 401
++PE ++ DI++ GV+L + G P Y P+ E +
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT 232
Query: 402 VEWLKMMVGTRRAEEVVDPNLEVKPATR 429
V T A+ ++D L V P R
Sbjct: 233 V--------TPEAKSLIDSMLTVNPKKR 252
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
E+ + +F+ E G+ Y + I + G + ++ EV + ++H
Sbjct: 18 ELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR----GVSREDIEREVSILKEIQH 73
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
N++ L +L+ E V G L +L + +LT E + + + Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDD----EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
LH ++ H D+K NI++ D + K+ DFGLA +D G + GT +V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
APE N L ++D++S GV+ ++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEK------EFRVEVEAIGHVRHKNLVR 246
LG G + +V K R G E A K + +A + E EV + V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L +L+ E V+ G L +L + +L+ E I + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 307 EPKVVHRDIKSSNILIDDEF----NAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYA 362
K+ H D+K NI++ D+ + K+ DFGLA ++ G + GT +VAPE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRDP 389
N L ++D++S GV+ ++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEK------EFRVEVEAIGHVRHKNLVR 246
LG G + +V K R G E A K + +A + E EV + V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L +L+ E V+ G L +L + +L+ E I + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLA----QKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 307 EPKVVHRDIKSSNILIDDEF----NAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYA 362
K+ H D+K NI++ D+ + K+ DFGLA ++ G + GT +VAPE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRDP 389
N L ++D++S GV+ ++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEK------EFRVEVEAIGHVRHKNLVR 246
LG G + +V K R G E A K + +A + E EV + V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L +L+ E V+ G L +L + +L+ E I + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 307 EPKVVHRDIKSSNILIDDE----FNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYA 362
K+ H D+K NI++ D+ + K+ DFGLA ++ G + GT +VAPE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRDP 389
N L ++D++S GV+ ++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEK------EFRVEVEAIGHVRHKNLVR 246
LG G + +V K R G E A K + +A + E EV + V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L +L+ E V+ G L +L + +L+ E I + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 307 EPKVVHRDIKSSNILIDDEF----NAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYA 362
K+ H D+K NI++ D+ + K+ DFGLA ++ G + GT +VAPE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRDP 389
N L ++D++S GV+ ++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 118/273 (43%), Gaps = 43/273 (15%)
Query: 183 IATNRFSAE----NVLGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQAEKEFRVEVEA-- 235
I RF+ E LG+G + VV + +++ G E A + A ++E EA
Sbjct: 4 ITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARI 63
Query: 236 IGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNL-EQWLHGAMRNQGNLTWEARMKVIIG 294
++H N+VRL E H L+++ V G L E + ++ + + I
Sbjct: 64 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-----HCIQQ 118
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNA---KVSDFGLAKLLDSGESHITTRVM 351
+A+ + H+ VVHR++K N+L+ + K++DFGLA ++ GE
Sbjct: 119 ILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFA 174
Query: 352 GTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV---------------DYGRPA 396
GT GY++PE + D+++ GV+L + G P Y P+
Sbjct: 175 GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS 234
Query: 397 NEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATR 429
E + V T A+++++ L + P+ R
Sbjct: 235 PEWDTV--------TPEAKDLINKMLTINPSKR 259
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEK------EFRVEVEAIGHVRHKNLVR 246
LG G + +V K R G E A K + +A + E EV + V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L +L+ E V+ G L +L + +L+ E I + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 307 EPKVVHRDIKSSNILIDDEF----NAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYA 362
K+ H D+K NI++ D+ + K+ DFGLA ++ G + GT +VAPE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRDP 389
N L ++D++S GV+ ++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
E+ + +F+ E G+ Y + I + G + ++ EV + ++H
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR----GVSREDIEREVSILKEIQH 72
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
N++ L +L+ E V G L +L + +LT E + + + Y
Sbjct: 73 PNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYY 128
Query: 302 LHEAIEPKVVHRDIKSSNILIDD----EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
LH ++ H D+K NI++ D + K+ DFGLA +D G + GT +V
Sbjct: 129 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 183
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
APE N L ++D++S GV+ ++G P
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
E+ + +F+ E G+ Y + I + G + ++ EV + ++H
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR----GVSREDIEREVSILKEIQH 72
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
N++ L +L+ E V G L +L + +LT E + + + Y
Sbjct: 73 PNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYY 128
Query: 302 LHEAIEPKVVHRDIKSSNILIDD----EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
LH ++ H D+K NI++ D + K+ DFGLA +D G + GT +V
Sbjct: 129 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 183
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
APE N L ++D++S GV+ ++G P
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
E+ + +F+ E G+ Y + I + G + ++ EV + ++H
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR----GVSREDIEREVSILKEIQH 73
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
N++ L +L+ E V G L +L + +LT E + + + Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDD----EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
LH ++ H D+K NI++ D + K+ DFGLA +D G + GT +V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
APE N L ++D++S GV+ ++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 113/260 (43%), Gaps = 34/260 (13%)
Query: 188 FSAENVLGEGGYGVVYKGR-----LINGSEVAVKKLLNNLGQAEKEFRVEVEAI-GHVRH 241
F V+G+G +G V R + +V KK + + EK E + +V+H
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK-KKEEKHIMSERNVLLKNVKH 98
Query: 242 KNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV L + + ++ V +Y+N G L + R + L AR A AL
Sbjct: 99 PFLVGL-HFSFQTADKLYFVLDYINGGEL---FYHLQRERCFLEPRARFYAA-EIASALG 153
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVM-GTFGYVAP 359
YLH +V+RD+K NIL+D + + ++DFGL K ++ E + TT GT Y+AP
Sbjct: 154 YLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAP 208
Query: 360 EYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVD 419
E + + D + G +L E + G P Y R E+ + +++
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF-YSRNTAEM--------------YDNILN 253
Query: 420 PNLEVKPATRALKRSLLVAL 439
L++KP R LL L
Sbjct: 254 KPLQLKPNITNSARHLLEGL 273
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 183 IATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQAEKEFR---VEVEAIGH 238
+ N F +LG+G +G V+ G A+K L + A+ E E + +
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 239 VRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVI-IGTA 296
RH L L Y + R+ V EY N G L + H ++ + E R +
Sbjct: 65 SRHPFLT-ALKYSFQTHDRLCFVMEYANGGEL--FFH---LSRERVFSEDRARFYGAEIV 118
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL-LDSGESHITTRVMGTFG 355
AL YLH E VV+RD+K N+++D + + K++DFGL K + G + GT
Sbjct: 119 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPE 174
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
Y+APE D + GV++ E + GR P
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 27/262 (10%)
Query: 185 TNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNL 244
++R+ +G G +GV R +E+ K + + ++ + E+ +RH N+
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNI 77
Query: 245 VRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM---KVIIGTAKALAY 301
VR + H +V EY + G L + + A R + EAR ++I G + A A
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED---EARFFFQQLISGVSYAHAM 134
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNA--KVSDFGLAK--LLDSGESHITTRVMGTFGYV 357
+V HRD+K N L+D K++DFG +K +L S +GT Y+
Sbjct: 135 -------QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ----PKSAVGTPAYI 183
Query: 358 APEYANTGMLNEK-SDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEE 416
APE + K +D++S GV L + G P + P N + + ++ + A
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNFRKTIHRILNVQYA-- 239
Query: 417 VVDPNLEVKPATRALKRSLLVA 438
+ + + P R L + VA
Sbjct: 240 -IPDYVHISPECRHLISRIFVA 260
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
E+ + +F+ E G+ Y + I + G + ++ EV + ++H
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR----GVSREDIEREVSILKEIQH 73
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
N++ L +L+ E V G L +L + +LT E + + + Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDD----EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
LH ++ H D+K NI++ D + K+ DFGLA +D G + GT +V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
APE N L ++D++S GV+ ++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
E+ + +F+ E G+ Y + I + G + ++ EV + ++H
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR----GVSREDIEREVSILKEIQH 73
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
N++ L +L+ E V G L +L + +LT E + + + Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDD----EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
LH ++ H D+K NI++ D + K+ DFGLA +D G + GT +V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
APE N L ++D++S GV+ ++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 183 IATNRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQAEKEFR---VEVEAIGH 238
+ N F +LG+G +G V+ G A+K L + A+ E E + +
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 239 VRHKNLVRLLGYCIEGVHRM-LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVI-IGTA 296
RH L L Y + R+ V EY N G L + H ++ + E R +
Sbjct: 66 SRHPFLT-ALKYSFQTHDRLCFVMEYANGGEL--FFH---LSRERVFSEDRARFYGAEIV 119
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKL-LDSGESHITTRVMGTFG 355
AL YLH E VV+RD+K N+++D + + K++DFGL K + G + GT
Sbjct: 120 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPE 175
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV 390
Y+APE D + GV++ E + GR P
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
E+ + +F+ E G+ Y + I + G + ++ EV + ++H
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR----GVSREDIEREVSILKEIQH 73
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
N++ L +L+ E V G L +L + +LT E + + + Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDD----EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
LH ++ H D+K NI++ D + K+ DFGLA +D G + GT +V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
APE N L ++D++S GV+ ++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 39/267 (14%)
Query: 185 TNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQAEKEFRVEVEA--IGHVRH 241
T+ + +G+G + VV + +L G E A K + A ++E EA ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNL-EQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
N+VRL E LV++ V G L E + ++ + + I +A+
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILEAVL 117
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNA---KVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ H+ VVHRD+K N+L+ + K++DFGLA + G+ GT GY+
Sbjct: 118 HCHQM---GVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV---------------DYGRPANEVNLV 402
+PE + DI++ GV+L + G P Y P+ E + V
Sbjct: 174 SPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTV 233
Query: 403 EWLKMMVGTRRAEEVVDPNLEVKPATR 429
T A+ +++ L + PA R
Sbjct: 234 --------TPEAKNLINQMLTINPAKR 252
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
E+ + +F+ E G+ Y + I + G + ++ EV + ++H
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR----GVSREDIEREVSILKEIQH 73
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
N++ L +L+ E V G L +L + +LT E + + + Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDD----EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
LH ++ H D+K NI++ D + K+ DFGLA +D G + GT +V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
APE N L ++D++S GV+ ++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLL------NNLGQAEKEFRVEVEAIGHVRHKNLVR 246
LG G + VV K R G + A K + + G + ++ EV + ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L +L+ E V G L +L + +LT E + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL- 133
Query: 307 EPKVVHRDIKSSNILIDD----EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYA 362
++ H D+K NI++ D + K+ DFGLA +D G + GT +VAPE
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIV 189
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRDP 389
N L ++D++S GV+ ++G P
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 119/271 (43%), Gaps = 33/271 (12%)
Query: 180 DLEIA--TNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEK-EFRVEVEAI 236
DL I ++R+ +G G +GV R +E+ K + + EK V+ E I
Sbjct: 11 DLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIAANVKREII 67
Query: 237 GH--VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM---KV 291
H +RH N+VR + H +V EY + G L + + A R + EAR ++
Sbjct: 68 NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED---EARFFFQQL 124
Query: 292 IIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNA--KVSDFGLAKLLDSGESHITTR 349
I G ++Y H +V HRD+K N L+D K+ DFG +K S H +
Sbjct: 125 ISG----VSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPK 174
Query: 350 -VMGTFGYVAPEYANTGMLNEK-SDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKM 407
+GT Y+APE + K +D++S GV L + G P + P N + +
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNFRKTIHR 232
Query: 408 MVGTRRAEEVVDPNLEVKPATRALKRSLLVA 438
++ + A + + + P R L + VA
Sbjct: 233 ILNVQYA---IPDYVHISPECRHLISRIFVA 260
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 103/264 (39%), Gaps = 72/264 (27%)
Query: 188 FSAENVLGEGGYGVVYKGR-LINGSEVAVKKL-LNNLGQAEKEFRVEVEAIGHVRHKNLV 245
F +G GG+GVV++ + ++ A+K++ L N A ++ EV+A+ + H +V
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 246 RLLGYCIEG-----------------------------------VHRMLVYEYVNN-GNL 269
R +E + RM + N G L
Sbjct: 68 RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQL 127
Query: 270 EQ-----WLHGAM---RNQGNLTWEAR------------MKVIIGTAKALAYLHEAIEPK 309
+ +L+ M R + W R + + I A+A+ +LH
Sbjct: 128 QPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK---G 184
Query: 310 VVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRV-----------MGTFGYVA 358
++HRD+K SNI + KV DFGL +D E T +GT Y++
Sbjct: 185 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMS 244
Query: 359 PEYANTGMLNEKSDIYSFGVLLLE 382
PE + + K DI+S G++L E
Sbjct: 245 PEQIHGNNYSHKVDIFSLGLILFE 268
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 127/302 (42%), Gaps = 65/302 (21%)
Query: 187 RFSAENVLGEGGYGVVY-----KGRLINGSEVAVKKLLNNLGQAEKE-FRVEVEAIGHVR 240
++ + +G+G YGVV + R I ++ K + + + E + EV + +
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNL------------------------------- 269
H N+ RL + + LV E + G+L
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 270 EQWLHGAMRN-QGNLTWEARMKVIIGTAK----ALAYLHEAIEPKVVHRDIKSSNILI-- 322
E+ ++G++ + +L + R K+I + AL YLH + HRDIK N L
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFST 203
Query: 323 DDEFNAKVSDFGLAK---LLDSGESHITTRVMGTFGYVAPEYANTGMLNE----KSDIYS 375
+ F K+ DFGL+K L++GE + T GT +VAPE NT NE K D +S
Sbjct: 204 NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT--NESYGPKCDAWS 261
Query: 376 FGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPNLEV-KPATRALKRS 434
GVLL + G P P VN + + ++ + E +PN V P R L +
Sbjct: 262 AGVLLHLLLMGAVPF----PG--VNDADTISQVLNKKLCFE--NPNYNVLSPLARDLLSN 313
Query: 435 LL 436
LL
Sbjct: 314 LL 315
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLL------NNLGQAEKEFRVEVEAIGHVRHKNLVR 246
LG G + VV K R G + A K + + G + ++ EV + ++H N++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 247 LLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAI 306
L +L+ E V G L +L + +LT E + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLHSL- 133
Query: 307 EPKVVHRDIKSSNILIDD----EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYA 362
++ H D+K NI++ D + K+ DFGLA +D G + GT +VAPE
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIV 189
Query: 363 NTGMLNEKSDIYSFGVLLLEAVTGRDP 389
N L ++D++S GV+ ++G P
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 18/213 (8%)
Query: 185 TNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGH--VRHK 242
++R+ +G G +GV R E+ K + G A E V+ E I H +RH
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIER-GAAIDE-NVQREIINHRSLRHP 76
Query: 243 NLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYL 302
N+VR + H ++ EY + G L + + A R + EAR ++Y
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSED---EARF-FFQQLLSGVSYC 132
Query: 303 HEAIEPKVVHRDIKSSNILIDDEFNA--KVSDFGLAKLLDSGESHITTR-VMGTFGYVAP 359
H ++ HRD+K N L+D K+ DFG +K S H + +GT Y+AP
Sbjct: 133 HSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAP 186
Query: 360 EYANTGMLNEK-SDIYSFGVLLLEAVTGRDPVD 391
E + K +D++S GV L + G P +
Sbjct: 187 EVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
E+ + +F+ E G+ Y + I + G + ++ EV + ++H
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR----GVSREDIEREVSILKEIQH 73
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
N++ L +L+ E V G L +L + +LT E + + + Y
Sbjct: 74 PNVITLHEVYENKTDVILIGELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDD----EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
LH ++ H D+K NI++ D + K+ DFGLA +D G + GT +V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
APE N L ++D++S GV+ ++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 241
E+ + +F+ E G+ Y + I + G + ++ EV + ++H
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR----GVSREDIEREVSILKEIQH 73
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAY 301
N++ L +L+ E V G L +L + +LT E + + + Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYY 129
Query: 302 LHEAIEPKVVHRDIKSSNILIDD----EFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
LH ++ H D+K NI++ D + K+ DFGLA +D G + GT +V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
APE N L ++D++S GV+ ++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 20/226 (8%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVE 232
+++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 233 VEAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEAR 288
+E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELA 117
Query: 289 MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHIT 347
+A+ + H V+HRDIK NILID + K+ DFG LL + +
Sbjct: 118 RSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVY 171
Query: 348 TRVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
T GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
E+E + + H ++++ + + +V E + G L + G R + EA K
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLK-----EATCK 117
Query: 291 VII-GTAKALAYLHEAIEPKVVHRDIKSSNILI---DDEFNAKVSDFGLAKLLDSGESHI 346
+ A+ YLHE ++HRD+K N+L+ +++ K++DFG +K+L GE+ +
Sbjct: 118 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL 172
Query: 347 TTRVMGTFGYVAPEY---ANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGR 394
+ GT Y+APE T N D +S GV+L ++G P R
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
E+E + + H ++++ + + +V E + G L + G R + EA K
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLK-----EATCK 117
Query: 291 VII-GTAKALAYLHEAIEPKVVHRDIKSSNILI---DDEFNAKVSDFGLAKLLDSGESHI 346
+ A+ YLHE ++HRD+K N+L+ +++ K++DFG +K+L GE+ +
Sbjct: 118 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL 172
Query: 347 TTRVMGTFGYVAPEY---ANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGR 394
+ GT Y+APE T N D +S GV+L ++G P R
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 194 LGEGGYGVVYK-----GRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+GG+ ++ + + ++ K LL Q EK +E+ + H+++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 105
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM---KVIIGTAKALAYLHEA 305
G+ + +V E +L + LH R + EAR ++++G YLH
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLE-LHK--RRKALTEPEARYYLRQIVLGCQ----YLHRN 158
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYVAPEYANT 364
+V+HRD+K N+ ++++ K+ DFGLA K+ GE + GT Y+APE +
Sbjct: 159 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSK 213
Query: 365 GMLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ + D++S G ++ + G+ P +
Sbjct: 214 KGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
E+E + + H ++++ + + +V E + G L + G R + EA K
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLK-----EATCK 116
Query: 291 VII-GTAKALAYLHEAIEPKVVHRDIKSSNILI---DDEFNAKVSDFGLAKLLDSGESHI 346
+ A+ YLHE ++HRD+K N+L+ +++ K++DFG +K+L GE+ +
Sbjct: 117 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL 171
Query: 347 TTRVMGTFGYVAPEY---ANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGR 394
+ GT Y+APE T N D +S GV+L ++G P R
Sbjct: 172 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 222
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
E+E + + H ++++ + + +V E + G L + G R + EA K
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLK-----EATCK 117
Query: 291 VII-GTAKALAYLHEAIEPKVVHRDIKSSNILI---DDEFNAKVSDFGLAKLLDSGESHI 346
+ A+ YLHE ++HRD+K N+L+ +++ K++DFG +K+L GE+ +
Sbjct: 118 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL 172
Query: 347 TTRVMGTFGYVAPEY---ANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGR 394
+ GT Y+APE T N D +S GV+L ++G P R
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 20/226 (8%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVE 232
+++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 233 VEAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEAR 288
+E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELA 117
Query: 289 MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHIT 347
+A+ + H V+HRDIK NILID + K+ DFG LL + +
Sbjct: 118 RSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVY 171
Query: 348 TRVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
T GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
E+E + + H ++++ + + +V E + G L + G R + EA K
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLK-----EATCK 123
Query: 291 VII-GTAKALAYLHEAIEPKVVHRDIKSSNILI---DDEFNAKVSDFGLAKLLDSGESHI 346
+ A+ YLHE ++HRD+K N+L+ +++ K++DFG +K+L GE+ +
Sbjct: 124 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL 178
Query: 347 TTRVMGTFGYVAPEY---ANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGR 394
+ GT Y+APE T N D +S GV+L ++G P R
Sbjct: 179 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 229
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 18/166 (10%)
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
E+E + + H ++++ + + +V E + G L + G R + EA K
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLK-----EATCK 242
Query: 291 VII-GTAKALAYLHEAIEPKVVHRDIKSSNILI---DDEFNAKVSDFGLAKLLDSGESHI 346
+ A+ YLHE ++HRD+K N+L+ +++ K++DFG +K+L GE+ +
Sbjct: 243 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL 297
Query: 347 TTRVMGTFGYVAPEY---ANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
+ GT Y+APE T N D +S GV+L ++G P
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI 252
LG G +G V++ G + AVKK+ + +AE E+ A + +V L G
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 155
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA-KALAYLHEAIEPKVV 311
EG + E + G+L Q ++ QG L E R +G A + L YLH +++
Sbjct: 156 EGPWVNIFMELLEGGSLGQ----LVKEQGCLP-EDRALYYLGQALEGLEYLHSR---RIL 207
Query: 312 HRDIKSSNILI-DDEFNAKVSDFGLAKLLDS---GESHIT-TRVMGTFGYVAPEYANTGM 366
H D+K+ N+L+ D +A + DFG A L G+S +T + GT ++APE
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 367 LNEKSDIYSFGVLLLEAVTGRDP 389
+ K D++S ++L + G P
Sbjct: 268 CDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 20/222 (9%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEVEAI 236
E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +E +
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 237 GHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVI 292
+ ++RLL + +L+ E + Q L + +G L E
Sbjct: 64 LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEP---VQDLFDFITERGALQEELARSFF 120
Query: 293 IGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVM 351
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 121 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFD 174
Query: 352 GTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 175 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 216
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 20/226 (8%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVE 232
+++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 233 VEAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEAR 288
+E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELA 117
Query: 289 MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHIT 347
+A+ + H V+HRDIK NILID + K+ DFG LL + +
Sbjct: 118 RSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVY 171
Query: 348 TRVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
T GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 194 LGEGGYGVVYK-----GRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+GG+ ++ + + ++ K LL Q EK +E+ + H+++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 107
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM---KVIIGTAKALAYLHEA 305
G+ + +V E +L + LH R + EAR ++++G YLH
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE-LHK--RRKALTEPEARYYLRQIVLGCQ----YLHRN 160
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYVAPEYANT 364
+V+HRD+K N+ ++++ K+ DFGLA K+ GE + GT Y+APE +
Sbjct: 161 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSK 215
Query: 365 GMLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ + D++S G ++ + G+ P +
Sbjct: 216 KGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 18/166 (10%)
Query: 231 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMK 290
E+E + + H ++++ + + +V E + G L + G R + EA K
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLK-----EATCK 256
Query: 291 VII-GTAKALAYLHEAIEPKVVHRDIKSSNILI---DDEFNAKVSDFGLAKLLDSGESHI 346
+ A+ YLHE ++HRD+K N+L+ +++ K++DFG +K+L GE+ +
Sbjct: 257 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL 311
Query: 347 TTRVMGTFGYVAPEY---ANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
+ GT Y+APE T N D +S GV+L ++G P
Sbjct: 312 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 194 LGEGGYGVVYK-----GRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLL 248
LG+GG+ ++ + + ++ K LL Q EK +E+ + H+++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 81
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM---KVIIGTAKALAYLHEA 305
G+ + +V E +L + LH R + EAR ++++G YLH
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLE-LHK--RRKALTEPEARYYLRQIVLGCQ----YLHRN 134
Query: 306 IEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMGTFGYVAPEYANT 364
+V+HRD+K N+ ++++ K+ DFGLA K+ GE + GT Y+APE +
Sbjct: 135 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSK 189
Query: 365 GMLNEKSDIYSFGVLLLEAVTGRDPVD 391
+ + D++S G ++ + G+ P +
Sbjct: 190 KGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 20/226 (8%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVE 232
+++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 233 VEAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEAR 288
+E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 83 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELA 139
Query: 289 MKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHIT 347
+A+ + H V+HRDIK NILID + K+ DFG LL + +
Sbjct: 140 RSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVY 193
Query: 348 TRVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
T GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 194 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 239
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 117
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 118 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 171
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 216
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 23/215 (10%)
Query: 191 ENVLGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVR-HKNLVRLL 248
E+VLGEG + V LI E AVK + G EVE + + H+N++ L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
+ E LV+E + G++ +H R N EA + V+ A AL +LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIH--KRRHFN-ELEASV-VVQDVASALDFLHNK--- 130
Query: 309 KVVHRDIKSSNILIDDEFN---AKVSDFGLAK--LLDSGESHITTRVM----GTFGYVAP 359
+ HRD+K NIL + K+ DFGL L+ S I+T + G+ Y+AP
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 360 EYA-----NTGMLNEKSDIYSFGVLLLEAVTGRDP 389
E + +++ D++S GV+L ++G P
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 145
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 146 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 199
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 23/210 (10%)
Query: 228 EFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEA 287
+F+ E++ I ++++ + G ++YEY+ N ++ ++ N T
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 288 RMKVIIGTAKA----LAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGE 343
++VI K+ +Y+H E + HRD+K SNIL+D K+SDFG E
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFG------ESE 200
Query: 344 SHITTRVM---GTFGYVAPE-YANTGMLN-EKSDIYSFGVLLLEAVTGRDPVDYGRPANE 398
+ ++ GT+ ++ PE ++N N K DI+S G+ L P + +
Sbjct: 201 YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF-----SLK 255
Query: 399 VNLVEWLKMMVGTRRAEEVVDPNLEVKPAT 428
++LVE + T+ E +D N + P T
Sbjct: 256 ISLVELFN-NIRTKNIEYPLDRNHFLYPLT 284
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 132
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 133 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 186
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 132
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 133 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 186
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 133
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 134 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 187
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRML-VYEYVNNGNL-------EQWLHGAMRNQGNLTW 285
E + L++ + GV R+L +E ++ L Q L + +G L
Sbjct: 109 EVV-------LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE 161
Query: 286 EARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGES 344
E +A+ + H V+HRDIK NILID + K+ DFG LL +
Sbjct: 162 ELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KD 215
Query: 345 HITTRVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
+ T GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 216 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 264
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRML-VYEYVNNGNL-------EQWLHGAMRNQGNLTW 285
E + L++ + GV R+L +E ++ L Q L + +G L
Sbjct: 96 EVV-------LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE 148
Query: 286 EARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGES 344
E +A+ + H V+HRDIK NILID + K+ DFG LL +
Sbjct: 149 ELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KD 202
Query: 345 HITTRVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
+ T GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 203 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 146
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 147 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 200
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 145
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 146 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 199
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 133
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 134 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 187
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 146
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 147 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 200
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 27/268 (10%)
Query: 180 DLEIA--TNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIG 237
DL I ++R+ +G G +GV R +E+ K + + ++ + E+
Sbjct: 11 DLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHR 70
Query: 238 HVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM---KVIIG 294
+RH N+VR + H +V EY + G L + + A R + EAR ++I G
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED---EARFFFQQLISG 127
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNA--KVSDFGLAKLLDSGESHITTR-VM 351
++Y H +V HRD+K N L+D K+ FG +K S H + +
Sbjct: 128 ----VSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTV 177
Query: 352 GTFGYVAPEYANTGMLNEK-SDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVG 410
GT Y+APE + K +D++S GV L + G P + P N + + ++
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNFRKTIHRILN 235
Query: 411 TRRAEEVVDPNLEVKPATRALKRSLLVA 438
+ A + + + P R L + VA
Sbjct: 236 VQYA---IPDYVHISPECRHLISRIFVA 260
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 145
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 146 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 199
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 146
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 147 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 200
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 160
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 161 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 214
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 25/261 (9%)
Query: 185 TNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNL 244
++R+ +G G +GV R +E+ K + + ++ + E+ +RH N+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI 77
Query: 245 VRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM---KVIIGTAKALAY 301
VR + H +V EY + G L + + A R + EAR ++I G ++Y
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED---EARFFFQQLISG----VSY 130
Query: 302 LHEAIEPKVVHRDIKSSNILIDDEFNA--KVSDFGLAKLLDSGESHITTR-VMGTFGYVA 358
H +V HRD+K N L+D K+ FG +K S H + +GT Y+A
Sbjct: 131 CHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIA 184
Query: 359 PEYANTGMLNEK-SDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEV 417
PE + K +D++S GV L + G P + P N + + ++ + A
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNFRKTIHRILNVQYA--- 239
Query: 418 VDPNLEVKPATRALKRSLLVA 438
+ + + P R L + VA
Sbjct: 240 IPDYVHISPECRHLISRIFVA 260
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 133
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 134 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 187
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 31/219 (14%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKE-FRV----EVEAIGHVRHKNLVRL 247
+G+G +G V+K R G +VA+KK+L + EKE F + E++ + ++H+N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLM---ENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 248 LGYC---IEGVHRMLVYEYVNNGNLEQWLHGAMRN-QGNLTWEARMKVIIGTAKALAYLH 303
+ C +R Y+ E L G + N T +V+ L Y+H
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL----DSGESHITTRVMGTFGYVAP 359
K++HRD+K++N+LI + K++DFGLA+ +S + RV+ T Y P
Sbjct: 143 RN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPP 198
Query: 360 EYANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYG 393
E +L E+ D++ G ++ E T R P+ G
Sbjct: 199 EL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQG 232
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 146
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 147 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 200
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 145
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 146 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 199
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 179 RDLEIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEV 233
++ E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 234 EAIGHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
E + + ++RLL + +L+ E Q L + +G L E
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 160
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITT 348
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 161 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 214
Query: 349 RVMGTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 110/242 (45%), Gaps = 47/242 (19%)
Query: 183 IATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNN--------------------- 221
+ N+++ ++ +G+G YGVV N + K+L+
Sbjct: 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69
Query: 222 -------LGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGV--HRMLVYEYVNNGNLEQ- 271
G E+ ++ E+ + + H N+V+L+ + H +V+E VN G + +
Sbjct: 70 PGGCIQPRGPIEQVYQ-EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV 128
Query: 272 -WLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKV 330
L +Q ++ +K + YLH K++HRDIK SN+L+ ++ + K+
Sbjct: 129 PTLKPLSEDQARFYFQDLIK-------GIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKI 178
Query: 331 SDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTG--MLNEKS-DIYSFGVLLLEAVTGR 387
+DFG++ G + + +GT ++APE + + + K+ D+++ GV L V G+
Sbjct: 179 ADFGVSNEF-KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
Query: 388 DP 389
P
Sbjct: 238 CP 239
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 186 NRFSAENVLGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNL 244
+RF E + G+G +G V G+ G VA+KK++ + +E ++ ++ + + H N+
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNI 81
Query: 245 VRLLGYCI-------EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAK 297
V+L Y ++ +V EYV + L + R Q + +
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIR 140
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDD-EFNAKVSDFGLAKLLDSGESHITTRVMGTFGY 356
++ LH V HRDIK N+L+++ + K+ DFG AK L E ++ + + Y
Sbjct: 141 SIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA--YICSRYY 197
Query: 357 VAPE--YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
APE + N DI+S G + E + G +P+ G
Sbjct: 198 RAPELIFGNQHY-TTAVDIWSVGCIFAEMMLG-EPIFRG 234
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 20/222 (9%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEVEAI 236
E +++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +E +
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 237 GHVR----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVI 292
+ ++RLL + +L+ E Q L + +G L E
Sbjct: 63 LLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFF 119
Query: 293 IGTAKALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVM 351
+A+ + H V+HRDIK NILID + K+ DFG LL + + T
Sbjct: 120 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFD 173
Query: 352 GTFGYVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
GT Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 174 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 215
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 170 LGWGHWFT--LRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNN---LGQ 224
L W FT ++++++ F V+G G +G V ++ N + K+LN L +
Sbjct: 56 LEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR 115
Query: 225 AEKE-FRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNL 283
AE FR E + + + + + L + H LV +Y G+L L + + L
Sbjct: 116 AETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLS---KFEDKL 172
Query: 284 TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFG-LAKLLDSG 342
+ I A+ +H+ VHRDIK N+L+D + +++DFG K+ D G
Sbjct: 173 PEDMARFYIGEMVLAIDSIHQL---HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG 229
Query: 343 ESHITTRVMGTFGYVAPEYANT-----GMLNEKSDIYSFGVLLLEAVTGRDP 389
+ V GT Y++PE G + D +S GV + E + G P
Sbjct: 230 TVQSSVAV-GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 193 VLGEGGYGVVYKGRLIN---GSEVAVK-----KLLNNLGQAEKEFRVEVEAIGHVRHKNL 244
V+G+G + VV R IN G + AVK K ++ G + ++ + E ++H ++
Sbjct: 31 VIGKGAFSVVR--RCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 245 VRLL-GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEAR-----MKVIIGTAKA 298
V LL Y +G+ M V+E+++ +L R + M+ I+ +A
Sbjct: 89 VELLETYSSDGMLYM-VFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQIL---EA 142
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFNA---KVSDFGLAKLLDSGESHITT--RVMGT 353
L Y H+ ++HRD+K N+L+ + N+ K+ DFG+A L GES + RV GT
Sbjct: 143 LRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGGRV-GT 196
Query: 354 FGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYG 393
++APE + D++ GV+L ++G P YG
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF-YG 235
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 18/221 (8%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKE----FRVEV 233
+RDL + + V+G G +G V R + +V KLL+ ++ F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ + +V+L + + +V EY+ G+L M N AR
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN----LMSNYDVPEKWARFY--- 178
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMG 352
TA+ + L +HRD+K N+L+D + K++DFG K+ G T V G
Sbjct: 179 -TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 236
Query: 353 TFGYVAPEYANT----GMLNEKSDIYSFGVLLLEAVTGRDP 389
T Y++PE + G + D +S GV L E + G P
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 186 NRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
+++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +E + +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 241 ----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
++RLL + +L+ E Q L + +G L E
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVMGTFG 355
+A+ + H V+HRDIK NILID + K+ DFG LL + + T GT
Sbjct: 121 EAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 174
Query: 356 YVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKE----FRVEV 233
+RDL + + V+G G +G V R + +V KLL+ ++ F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ + +V+L + + +V EY+ G+L M N AR
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN----LMSNYDVPEKWARFY--- 178
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMG 352
TA+ + L +HRD+K N+L+D + K++DFG K+ G T V G
Sbjct: 179 -TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 236
Query: 353 TFGYVAPEYANT----GMLNEKSDIYSFGVLLLEAVTGRDPV 390
T Y++PE + G + D +S GV L E + G P
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEKE----FRVEV 233
+RDL + + V+G G +G V R + +V KLL+ ++ F E
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVII 293
+ + +V+L + + +V EY+ G+L M N AR
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN----LMSNYDVPEKWARFY--- 173
Query: 294 GTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLA-KLLDSGESHITTRVMG 352
TA+ + L +HRD+K N+L+D + K++DFG K+ G T V G
Sbjct: 174 -TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 231
Query: 353 TFGYVAPEYANT----GMLNEKSDIYSFGVLLLEAVTGRDPV 390
T Y++PE + G + D +S GV L E + G P
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 186 NRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
+++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +E + +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 241 ----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
++RLL + +L+ E Q L + +G L E
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVMGTFG 355
+A+ + H V+HRDIK NILID + K+ DFG LL + + T GT
Sbjct: 121 EAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 174
Query: 356 YVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 31/219 (14%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKE-FRV----EVEAIGHVRHKNLVRL 247
+G+G +G V+K R G +VA+KK+L + EKE F + E++ + ++H+N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLM---ENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 248 LGYC---IEGVHRMLVYEYVNNGNLEQWLHGAMRN-QGNLTWEARMKVIIGTAKALAYLH 303
+ C +R Y+ E L G + N T +V+ L Y+H
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL----DSGESHITTRVMGTFGYVAP 359
K++HRD+K++N+LI + K++DFGLA+ +S + RV+ T Y P
Sbjct: 143 RN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPP 198
Query: 360 EYANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYG 393
E +L E+ D++ G ++ E T R P+ G
Sbjct: 199 EL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQG 232
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 170 LGWGHWFT--LRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNN---LGQ 224
L W FT ++++++ F V+G G +G V ++ N + K+LN L +
Sbjct: 72 LEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR 131
Query: 225 AEKE-FRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNL 283
AE FR E + + + + + L + H LV +Y G+L L + + L
Sbjct: 132 AETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLS---KFEDKL 188
Query: 284 TWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFG-LAKLLDSG 342
+ I A+ +H+ VHRDIK N+L+D + +++DFG K+ D G
Sbjct: 189 PEDMARFYIGEMVLAIDSIHQL---HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG 245
Query: 343 ESHITTRVMGTFGYVAPEYANT-----GMLNEKSDIYSFGVLLLEAVTGRDP 389
+ V GT Y++PE G + D +S GV + E + G P
Sbjct: 246 TVQSSVAV-GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 186 NRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
+++ +LG GG+G VY G R+ + VA+K + +++ G+ RV +E + +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 241 ----HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA 296
++RLL + +L+ E Q L + +G L E
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 297 KALAYLHEAIEPKVVHRDIKSSNILID-DEFNAKVSDFGLAKLLDSGESHITTRVMGTFG 355
+A+ + H V+HRDIK NILID + K+ DFG LL + + T GT
Sbjct: 121 EAVRHCHNX---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 174
Query: 356 YVAPEYANTGMLNEKS-DIYSFGVLLLEAVTGRDPVDY 392
Y PE+ + +S ++S G+LL + V G P ++
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCI 252
LG G +G V++ G + AVKK+ + +AE E+ A + +V L G
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 136
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA-KALAYLHEAIEPKVV 311
EG + E + G+L Q ++ QG L E R +G A + L YLH +++
Sbjct: 137 EGPWVNIFMELLEGGSLGQ----LVKEQGCLP-EDRALYYLGQALEGLEYLHSR---RIL 188
Query: 312 HRDIKSSNILI-DDEFNAKVSDFGLAKLLDS---GESHIT-TRVMGTFGYVAPEYANTGM 366
H D+K+ N+L+ D +A + DFG A L G+ +T + GT ++APE
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 367 LNEKSDIYSFGVLLLEAVTGRDP 389
+ K D++S ++L + G P
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ + G+ A+K L + L Q E E + V
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 85
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G + +R G +
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFE 141
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 142 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPE 194
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 31/219 (14%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKE-FRV----EVEAIGHVRHKNLVRL 247
+G+G +G V+K R G +VA+KK+L + EKE F + E++ + ++H+N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLM---ENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 248 LGYC---IEGVHRMLVYEYVNNGNLEQWLHGAMRN-QGNLTWEARMKVIIGTAKALAYLH 303
+ C +R Y+ E L G + N T +V+ L Y+H
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL----DSGESHITTRVMGTFGYVAP 359
K++HRD+K++N+LI + K++DFGLA+ +S + RV+ T Y P
Sbjct: 143 RN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPP 198
Query: 360 EYANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYG 393
E +L E+ D++ G ++ E T R P+ G
Sbjct: 199 EL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQG 232
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 31/219 (14%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKE-FRV----EVEAIGHVRHKNLVRL 247
+G+G +G V+K R G +VA+KK+L + EKE F + E++ + ++H+N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLM---ENEKEGFPITALREIKILQLLKHENVVNL 81
Query: 248 LGYC---IEGVHRMLVYEYVNNGNLEQWLHGAMRN-QGNLTWEARMKVIIGTAKALAYLH 303
+ C +R Y+ E L G + N T +V+ L Y+H
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 141
Query: 304 EAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLL----DSGESHITTRVMGTFGYVAP 359
K++HRD+K++N+LI + K++DFGLA+ +S + RV+ T Y P
Sbjct: 142 RN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPP 197
Query: 360 EYANTGMLNEKS-----DIYSFGVLLLEAVTGRDPVDYG 393
E +L E+ D++ G ++ E T R P+ G
Sbjct: 198 EL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQG 231
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVE-VEAIGHVRHKNLVRLLGYC 251
LG G +G V++ + G + AVKK+ + FRVE + A + +V L G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEV------FRVEELVACAGLSSPRIVPLYGAV 133
Query: 252 IEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA-KALAYLHEAIEPKV 310
EG + E + G+L Q ++ G L E R +G A + L YLH ++
Sbjct: 134 REGPWVNIFMELLEGGSLGQ----LIKQMGCLP-EDRALYYLGQALEGLEYLHTR---RI 185
Query: 311 VHRDIKSSNILID-DEFNAKVSDFGLAKLLDS---GESHIT-TRVMGTFGYVAPEYANTG 365
+H D+K+ N+L+ D A + DFG A L G+S +T + GT ++APE
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 245
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDP 389
+ K DI+S ++L + G P
Sbjct: 246 PCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F +G G +G V+ + G+ A+K L + L Q E E + V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + KV+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 20/217 (9%)
Query: 182 EIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEK-EFR---VEVEAIG 237
++ + F +G+G +G V + + ++ K +N E+ E R E++ +
Sbjct: 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQ 70
Query: 238 HVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTW-EARMKVIIGT- 295
+ H LV L + +V + + G+L L Q N+ + E +K+ I
Sbjct: 71 GLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL------QQNVHFKEETVKLFICEL 124
Query: 296 AKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFG 355
AL YL +++HRD+K NIL+D+ + ++DF +A +L E+ ITT + GT
Sbjct: 125 VMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITT-MAGTKP 179
Query: 356 YVAPEYANT---GMLNEKSDIYSFGVLLLEAVTGRDP 389
Y+APE ++ + D +S GV E + GR P
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ + G+ A+K L + L Q E E + V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G + +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ + G+ A+K L + L Q E E + V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 156
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ + G+ A+K L + L Q E E + V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ + G+ A+K L + L Q E E + V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ + G+ A+K L + L Q E E + V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ + G+ A+K L + L Q E E + V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 156
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPE 209
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F +G G +G V+ + G+ A+K L + L Q E E + V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EY+ G++ +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + KV+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 23/215 (10%)
Query: 191 ENVLGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVR-HKNLVRLL 248
E+VLGEG + V LI E AVK + G EVE + + H+N++ L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 249 GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEP 308
+ E LV+E + G++ +H R N EA + V+ A AL +LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIH--KRRHFN-ELEASV-VVQDVASALDFLHNK--- 130
Query: 309 KVVHRDIKSSNILIDDEFN---AKVSDFGLAK--LLDSGESHITTRVM----GTFGYVAP 359
+ HRD+K NIL + K+ DF L L+ S I+T + G+ Y+AP
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 360 EYA-----NTGMLNEKSDIYSFGVLLLEAVTGRDP 389
E + +++ D++S GV+L ++G P
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRV--EVEAIGHVRHKNLVRLLGY 250
LG G YG V R + E A+K + ++ EV + + H N+++L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 251 CIEGVHRMLVYEYVNNGNL-EQWLHGAMRNQGNLTWEARMKVIIGTA-KALAYLHEAIEP 308
+ + LV E G L ++ +H N E VII + YLH+
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMKFN------EVDAAVIIKQVLSGVTYLHKH--- 155
Query: 309 KVVHRDIKSSNILIDD-EFNA--KVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTG 365
+VHRD+K N+L++ E +A K+ DFGL+ + ++ + + R +GT Y+APE
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN-QKKMKER-LGTAYYIAPEVLRKK 213
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDP 389
+EK D++S GV+L + G P
Sbjct: 214 -YDEKCDVWSIGVILFILLAGYPP 236
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 29/221 (13%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGH------ 238
++F LG G +G V+ + G+ A+K L +K+ V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKEIEHTLNEKR 93
Query: 239 ----VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
V LV+L + + +V EY G E + H +R G +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG--EMFSH--LRRIGRFSEPHARFYAAQ 149
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTF 354
YLH +++RD+K N++ID + KV+DFGLAK + T + GT
Sbjct: 150 IVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTP 202
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
Y+APE + N+ D ++ GVL+ E G P +P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVE-VEAIGHVRHKNLVRLLGYC 251
+G G +G V++ + G + AVKK+ + FRVE + A + +V L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEV------FRVEELVACAGLSSPRIVPLYGAV 119
Query: 252 IEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA-KALAYLHEAIEPKV 310
EG + E + G+L Q ++ G L E R +G A + L YLH ++
Sbjct: 120 REGPWVNIFMELLEGGSLGQ----LIKQMGCLP-EDRALYYLGQALEGLEYLHTR---RI 171
Query: 311 VHRDIKSSNILID-DEFNAKVSDFGLAKLLDS---GESHIT-TRVMGTFGYVAPEYANTG 365
+H D+K+ N+L+ D A + DFG A L G+S +T + GT ++APE
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDP 389
+ K DI+S ++L + G P
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 194 LGEGGYGVVYKGR-LINGSEVAVKKLLNNLGQAEKEFRVE-VEAIGHVRHKNLVRLLGYC 251
+G G +G V++ + G + AVKK+ + FRVE + A + +V L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEV------FRVEELVACAGLSSPRIVPLYGAV 135
Query: 252 IEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTA-KALAYLHEAIEPKV 310
EG + E + G+L Q ++ G L E R +G A + L YLH ++
Sbjct: 136 REGPWVNIFMELLEGGSLGQ----LIKQMGCLP-EDRALYYLGQALEGLEYLHTR---RI 187
Query: 311 VHRDIKSSNILID-DEFNAKVSDFGLAKLLDS---GESHIT-TRVMGTFGYVAPEYANTG 365
+H D+K+ N+L+ D A + DFG A L G+S +T + GT ++APE
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 366 MLNEKSDIYSFGVLLLEAVTGRDP 389
+ K DI+S ++L + G P
Sbjct: 248 PCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F +G G +G V+ + G+ A+K L + L Q E E + V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EY+ G++ +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + KV+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ +G+ A+K L + L Q E E + V
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 86
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G + +R G +
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFE 142
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID++ +V+DFG AK + T + GT Y+APE
Sbjct: 143 YLHSL---DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 195
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 196 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ +G+ A+K L + L Q E E + V
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 120
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 176
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 177 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA----TWTLCGTPEYLAPE 229
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ + G+ A+K L + L Q E E + V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G + +R G
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFE 156
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ + G+ A+K L + L Q E E + V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSH--LRRIGRFXEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ + G+ A+K L + L Q E E + V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSH--LRRIGRFXEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
YLH +++RD+K N+LID + KV+DFG AK + T + GT Y+
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYL 206
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
APE + N+ D ++ GVL+ E G P +P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 55/275 (20%)
Query: 185 TNRFSAENVLGEGGYGVV-----------YKGRLINGSEVAVKKLLNNLGQAEKEFRVEV 233
T+ + LG+G + VV Y ++IN +++ + + + E+E R+
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSAR----DHQKLEREARI-- 83
Query: 234 EAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNL-EQWLHGAMRNQGNLTWEARMKVI 292
++H N+VRL E LV++ V G L E + ++ + + I
Sbjct: 84 --CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCI 136
Query: 293 IGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNA---KVSDFGLAKLLDSGESHITTR 349
+++ ++H+ +VHRD+K N+L+ + K++DFGLA + GE
Sbjct: 137 HQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFG 192
Query: 350 VMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV---------------DYGR 394
GT GY++PE + DI++ GV+L + G P Y
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF 252
Query: 395 PANEVNLVEWLKMMVGTRRAEEVVDPNLEVKPATR 429
P+ E + V T A+ +++ L + PA R
Sbjct: 253 PSPEWDTV--------TPEAKNLINQMLTINPAKR 279
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 36/225 (16%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSE--VAVKKLLNNLGQAEKEFRVEVEAIGHVRHKN 243
+R+ LG GG G+V+ + N + VA+KK++ Q+ K E++ I + H N
Sbjct: 11 SRYMDLKPLGCGGNGLVFSA-VDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDN 69
Query: 244 LVRLL--------------GYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM 289
+V++ G E +V EY+ +L L QG L E
Sbjct: 70 IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVL-----EQGPLLEEHAR 123
Query: 290 KVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDE-FNAKVSDFGLAKLLDSGESHITT 348
+ + L Y+H A V+HRD+K +N+ I+ E K+ DFGLA+++D SH
Sbjct: 124 LFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH--- 177
Query: 349 RVMGTFGYVAPEYANTGML------NEKSDIYSFGVLLLEAVTGR 387
+ + G V Y + +L + D+++ G + E +TG+
Sbjct: 178 KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ + G+ A+K L + L Q E E + V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EY G E + H +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N++ID + KV+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 39/267 (14%)
Query: 185 TNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQAEKEFRVEVEA--IGHVRH 241
T+ + LG+G + VV + ++ G E A K + A ++E EA ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNL-EQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
N+VRL E LV++ V G L E + ++ + + I +++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILESVN 117
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNA---KVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ H +VHRD+K N+L+ + K++DFGLA + G+ GT GY+
Sbjct: 118 HCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV---------------DYGRPANEVNLV 402
+PE + D+++ GV+L + G P Y P+ E + V
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 233
Query: 403 EWLKMMVGTRRAEEVVDPNLEVKPATR 429
T A+++++ L + PA R
Sbjct: 234 --------TPEAKDLINKMLTINPAKR 252
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 93/225 (41%), Gaps = 34/225 (15%)
Query: 186 NRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNL--------GQAEKEFRVEVEAIG 237
++ ++LGEG YG V + + SE ++ + L E + E++ +
Sbjct: 5 GKYLMGDLLGEGSYGKV---KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLR 61
Query: 238 HVRHKNLVRLLG--YCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKV---- 291
+RHKN+++L+ Y E +V EY G M+ + E R V
Sbjct: 62 RLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG---------MQEMLDSVPEKRFPVCQAH 112
Query: 292 --IIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTR 349
L YLH +VH+DIK N+L+ K+S G+A+ L + T R
Sbjct: 113 GYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 350 V-MGTFGYVAPEYAN--TGMLNEKSDIYSFGVLLLEAVTGRDPVD 391
G+ + PE AN K DI+S GV L TG P +
Sbjct: 170 TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ G+ A+K L + L Q E E + V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 92
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G + +R G +
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFE 148
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 149 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 201
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 29/262 (11%)
Query: 185 TNRFSAENVLGEGGYGVVYKG-RLINGSEVAVKKLLNNLGQAEKEFRVEVEA--IGHVRH 241
T+ + LG+G + VV + ++ G E A K + A ++E EA ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 242 KNLVRLLGYCIEGVHRMLVYEYVNNGNL-EQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
N+VRL E LV++ V G L E + ++ + + I +++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILESVN 117
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNA---KVSDFGLAKLLDSGESHITTRVMGTFGYV 357
+ H +VHRD+K N+L+ + K++DFGLA + G+ GT GY+
Sbjct: 118 HCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPV---DYGRPANEVNL-------VEWLKM 407
+PE + D+++ GV+L + G P D R ++ EW +
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 233
Query: 408 MVGTRRAEEVVDPNLEVKPATR 429
T A+++++ L + PA R
Sbjct: 234 ---TPEAKDLINKMLTINPAKR 252
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ G+ A+K L + L Q E E + V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G + +R G +
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ +G+ A+K L + L Q E E + V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ G+ A+K L + L Q E E + V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 11/199 (5%)
Query: 194 LGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAEK-EFRVEVEAIGHVRHKNLVRLLGYCI 252
LG G +GVV++ V V K +N +K + E+ + + H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 253 EGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVH 312
+ +L+ E+++ G L ++ + + + L ++HE +VH
Sbjct: 119 DKYEMVLILEFLSGGEL---FDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVH 172
Query: 313 RDIKSSNILIDDE--FNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEK 370
DIK NI+ + + + K+ DFGLA L+ E I T + APE + +
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDE--IVKVTTATAEFAAPEIVDREPVGFY 230
Query: 371 SDIYSFGVLLLEAVTGRDP 389
+D+++ GVL ++G P
Sbjct: 231 TDMWAIGVLGYVLLSGLSP 249
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 29/221 (13%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGH------ 238
++F LG G +G V+ + G+ A+K L +K+ V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKEIEHTLNEKR 93
Query: 239 ----VRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIG 294
V LV+L + + +V EY G E + H +R G +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG--EMFSH--LRRIGRFSEPHARFYAAQ 149
Query: 295 TAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTF 354
YLH +++RD+K N++ID + +V+DFGLAK + T + GT
Sbjct: 150 IVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTP 202
Query: 355 GYVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
Y+APE + N+ D ++ GVL+ E G P +P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ G+ A+K L + L Q E E + V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ +G+ A+K L + L Q E E + V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ +G+ A+K L + L Q E E + V
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 156
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
YLH +++RD+K N++ID + KV+DFG AK + T + GT Y+
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYL 205
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
APE + N+ D ++ GVL+ E G P +P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ G+ A+K L + L Q E E + V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G + +R G +
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 26/182 (14%)
Query: 283 LTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSG 342
+T E + A+ + +L K +HRD+ + NIL+ + K+ DFGLA+ +
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKN 252
Query: 343 ESHI---TTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEAVT-GRDPVDYGRPANE 398
++ TR+ ++APE + + KSD++S+GVLL E + G P P +
Sbjct: 253 PDYVRKGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY----PGVQ 306
Query: 399 VNLVEWLKMMVGTR-RAEEVVDPNLEVKPATRALKRSLLVALRCVDPDSEKRPKMSQVVR 457
++ ++ G R RA E P + + L C D ++RP+ +++V
Sbjct: 307 MDEDFCSRLREGMRMRAPEYSTPEI------------YQIMLDCWHRDPKERPRFAELVE 354
Query: 458 ML 459
L
Sbjct: 355 KL 356
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ +G+ A+K L + L Q E E + V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G + +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ G+ A+K L + L Q E E + V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 156
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
YLH +++RD+K N++ID + KV+DFG AK + T + GT Y+
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYL 206
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
APE + N+ D ++ GVL+ E G P +P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
YLH +++RD+K N++ID + KV+DFG AK + T + GT Y+
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYL 206
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
APE + N+ D ++ GVL+ E G P +P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
YLH +++RD+K N++ID + KV+DFG AK + T + GT Y+
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYL 206
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
APE + N+ D ++ GVL+ E G P +P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ G+ A+K L + L Q E E + V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G + +R G +
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
YLH +++RD+K N++ID + KV+DFG AK + T + GT Y+
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYL 206
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
APE + N+ D ++ GVL+ E G P +P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ +G+ A+K L + L Q E E + V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ +G+ A+K L + L Q E E + V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G + +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ +G+ A+K L + L Q E E + V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G + +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ G+ A+K L + L Q E E + V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 92
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G + +R G
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFE 148
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 149 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 201
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ G+ A+K L + L Q E E + V
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 120
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 176
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 177 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 229
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+
Sbjct: 148 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYL 200
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
APE + N+ D ++ GVL+ E G P +P
Sbjct: 201 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 259 LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSS 318
LV+E+VNN + +Q Q ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQLY------QTLTDYDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 319 NILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNEKSDIYSF 376
N+LID E ++ D+GLA+ G+ + RV + + PE + M + D++S
Sbjct: 161 NVLIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSL 218
Query: 377 GVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDP-NLEVKP 426
G +L + ++P +G N LV K++ GT + +D N+E+ P
Sbjct: 219 GCMLASMIFRKEPFFHGH-DNYDQLVRIAKVL-GTEDLYDYIDKYNIELDP 267
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYL 205
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
APE + N+ D ++ GVL+ E G P +P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYL 205
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
APE + N+ D ++ GVL+ E G P +P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYL 205
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
APE + N+ D ++ GVL+ E G P +P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ + G+ A+K L + L Q E E + V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EY G E + H +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N++ID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+
Sbjct: 174 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYL 226
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
APE + N+ D ++ GVL+ E G P +P
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 298 ALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYV 357
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYL 205
Query: 358 APEYANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
APE + N+ D ++ GVL+ E G P +P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 185 TNRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKLLNN---LGQAEKEFRVEVEAIGHVR 240
++R+ LG G YG V+ + G+E A+K + + EV + +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARM--KVIIGTAKA 298
H N+++L + + + LV E G L + +R + + A + +V+ GT
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI--ILRQKFSEVDAAVIMKQVLSGTT-- 135
Query: 299 LAYLHEAIEPKVVHRDIKSSNILIDDEFN---AKVSDFGLAKLLDSGESHITTRVMGTFG 355
YLH+ +VHRD+K N+L++ + K+ DFGL+ + G + R +GT
Sbjct: 136 --YLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKER-LGTAY 188
Query: 356 YVAPEYANTGMLNEKSDIYSFGVLLLEAVTGRDP 389
Y+APE +EK D++S GV+L + G P
Sbjct: 189 YIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPP 221
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ +G+ A+K L + L Q E E + V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ +G+ A+K L + L Q E E + V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G E + H +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSH--LRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N++ID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ E G P +P
Sbjct: 209 IIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 259 LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSS 318
LV+E+VNN + +Q Q ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQLY------QTLTDYDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 319 NILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNEKSDIYSF 376
N++ID E ++ D+GLA+ G+ + RV + + PE + M + D++S
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSL 218
Query: 377 GVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDP-NLEVKP 426
G +L + ++P +G N LV K++ GT + +D N+E+ P
Sbjct: 219 GCMLASMIFRKEPFFHGH-DNYDQLVRIAKVL-GTEDLYDYIDKYNIELDP 267
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 17/215 (7%)
Query: 186 NRFSAENVLGEGGYG-VVYKGRLINGSEVAVKKL----LNNLGQAEKEFRVEVEAIGHVR 240
++F LG G +G V+ +G+ A+K L + L Q E E + V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 241 HKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALA 300
LV+L + + +V EYV G + +R G +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 301 YLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPE 360
YLH +++RD+K N+LID + +V+DFG AK + T + GT Y+APE
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 361 YANTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRP 395
+ N+ D ++ GVL+ + G P +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 259 LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSS 318
LV+E+VNN + +Q Q ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQLY------QTLTDYDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 319 NILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNEKSDIYSF 376
N++ID E ++ D+GLA+ G+ + RV + + PE + M + D++S
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSL 218
Query: 377 GVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDP-NLEVKP 426
G +L + ++P +G N LV K++ GT + +D N+E+ P
Sbjct: 219 GCMLASMIFRKEPFFHGH-DNYDQLVRIAKVL-GTEDLYDYIDKYNIELDP 267
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 33/260 (12%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAE----------- 226
+ +L + ++ + + G YG V G G VA+K++ N +
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 227 KEFRVEVEAIGHVRHKNLVRLLGYCIE----GVHRMLVYEYVNNGNLEQWLHGAMRNQGN 282
K E+ + H H N++ L + +H++ + + +L Q +H +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD---QRIV 130
Query: 283 LTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK--LLD 340
++ + + L LHEA VVHRD+ NIL+ D + + DF LA+ D
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 341 SGESHITTRVMGTFGYVAPEYA-NTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEV 399
+ ++H T Y APE + D++S G ++ E + N++
Sbjct: 188 ANKTHYVTHRW----YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 400 N-LVEWLKMMVGTRRAEEVV 418
N +VE +VGT + E+VV
Sbjct: 244 NKIVE----VVGTPKIEDVV 259
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 259 LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSS 318
LV+E+VNN + +Q Q ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQLY------QTLTDYDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 319 NILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNEKSDIYSF 376
N++ID E ++ D+GLA+ G+ + RV + + PE + M + D++S
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSL 218
Query: 377 GVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDP-NLEVKP 426
G +L + ++P +G N LV K++ GT + +D N+E+ P
Sbjct: 219 GCMLASMIFRKEPFFHGH-DNYDQLVRIAKVL-GTEDLYDYIDKYNIELDP 267
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 33/260 (12%)
Query: 178 LRDLEIATNRFSAENVLGEGGYGVVYKGRLINGSEVAVKKLLNNLGQAE----------- 226
+ +L + ++ + + G YG V G G VA+K++ N +
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 227 KEFRVEVEAIGHVRHKNLVRLLGYCIE----GVHRMLVYEYVNNGNLEQWLHGAMRNQGN 282
K E+ + H H N++ L + +H++ + + +L Q +H +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD---QRIV 130
Query: 283 LTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAK--LLD 340
++ + + L LHEA VVHRD+ NIL+ D + + DF LA+ D
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 341 SGESHITTRVMGTFGYVAPEYA-NTGMLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEV 399
+ ++H T Y APE + D++S G ++ E + N++
Sbjct: 188 ANKTHYVTHRW----YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 400 N-LVEWLKMMVGTRRAEEVV 418
N +VE +VGT + E+VV
Sbjct: 244 NKIVE----VVGTPKIEDVV 259
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 259 LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSS 318
LV+E+VNN + +Q Q ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQLY------QTLTDYDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 319 NILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNEKSDIYSF 376
N++ID E ++ D+GLA+ G+ + RV + + PE + M + D++S
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSL 218
Query: 377 GVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDP-NLEVKP 426
G +L + ++P +G N LV K++ GT + +D N+E+ P
Sbjct: 219 GCMLASMIFRKEPFFHGH-DNYDQLVRIAKVL-GTEDLYDYIDKYNIELDP 267
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 259 LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSS 318
LV+E+VNN + +Q Q ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQLY------QTLTDYDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 319 NILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNEKSDIYSF 376
N++ID E ++ D+GLA+ G+ + RV + + PE + M + D++S
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSL 218
Query: 377 GVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDP-NLEVKP 426
G +L + ++P +G N LV K++ GT + +D N+E+ P
Sbjct: 219 GCMLASMIFRKEPFFHGH-DNYDQLVRIAKVL-GTEDLYDYIDKYNIELDP 267
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 259 LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSS 318
LV+E+VNN + +Q Q ++ R + KAL Y H ++HRD+K
Sbjct: 110 LVFEHVNNTDFKQLY------QTLTDYDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 159
Query: 319 NILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNEKSDIYSF 376
N++ID E ++ D+GLA+ G+ + RV + + PE + M + D++S
Sbjct: 160 NVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSL 217
Query: 377 GVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDP-NLEVKP 426
G +L + ++P +G N LV K++ GT + +D N+E+ P
Sbjct: 218 GCMLASMIFRKEPFFHGH-DNYDQLVRIAKVL-GTEDLYDYIDKYNIELDP 266
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 259 LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSS 318
LV+E+VNN + +Q Q ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQLY------QTLTDYDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 319 NILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNEKSDIYSF 376
N++ID E ++ D+GLA+ G+ + RV + + PE + M + D++S
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSL 218
Query: 377 GVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDP-NLEVKP 426
G +L + ++P +G N LV K++ GT + +D N+E+ P
Sbjct: 219 GCMLASMIFRKEPFFHGH-DNYDQLVRIAKVL-GTEDLYDYIDKYNIELDP 267
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 259 LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSS 318
LV+E+VNN + +Q Q ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQLY------QTLTDYDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 319 NILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNEKSDIYSF 376
N++ID E ++ D+GLA+ G+ + RV + + PE + M + D++S
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSL 218
Query: 377 GVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDP-NLEVKP 426
G +L + ++P +G N LV K++ GT + +D N+E+ P
Sbjct: 219 GCMLASMIFRKEPFFHGH-DNYDQLVRIAKVL-GTEDLYDYIDKYNIELDP 267
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 259 LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSS 318
LV+E+VNN + +Q Q ++ R + KAL Y H ++HRD+K
Sbjct: 110 LVFEHVNNTDFKQLY------QTLTDYDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 159
Query: 319 NILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNEKSDIYSF 376
N++ID E ++ D+GLA+ G+ + RV + + PE + M + D++S
Sbjct: 160 NVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSL 217
Query: 377 GVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDP-NLEVKP 426
G +L + ++P +G N LV K++ GT + +D N+E+ P
Sbjct: 218 GCMLASMIFRKEPFFHGH-DNYDQLVRIAKVL-GTEDLYDYIDKYNIELDP 266
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 259 LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSS 318
LV+E+VNN + +Q Q ++ R + KAL Y H ++HRD+K
Sbjct: 116 LVFEHVNNTDFKQLY------QTLTDYDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 165
Query: 319 NILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNEKSDIYSF 376
N++ID E ++ D+GLA+ G+ + RV + + PE + M + D++S
Sbjct: 166 NVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSL 223
Query: 377 GVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDP-NLEVKP 426
G +L + ++P +G N LV K++ GT + +D N+E+ P
Sbjct: 224 GCMLASMIFRKEPFFHGH-DNYDQLVRIAKVL-GTEDLYDYIDKYNIELDP 272
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 259 LVYEYVNNGNLEQWLHGAMRNQGNLTWEARMKVIIGTAKALAYLHEAIEPKVVHRDIKSS 318
LV+E+VNN + +Q Q ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQLY------QTLTDYDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 319 NILIDDEFNA-KVSDFGLAKLLDSGESHITTRVMGTFGYVAPE-YANTGMLNEKSDIYSF 376
N++ID E ++ D+GLA+ G+ + RV + + PE + M + D++S
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSL 218
Query: 377 GVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDP-NLEVKP 426
G +L + ++P +G N LV K++ GT + +D N+E+ P
Sbjct: 219 GCMLASMIFRKEPFFHGH-DNYDQLVRIAKVL-GTEDLYDYIDKYNIELDP 267
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,499,838
Number of Sequences: 62578
Number of extensions: 583316
Number of successful extensions: 4157
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 216
Number of HSP's that attempted gapping in prelim test: 1539
Number of HSP's gapped (non-prelim): 1143
length of query: 508
length of database: 14,973,337
effective HSP length: 103
effective length of query: 405
effective length of database: 8,527,803
effective search space: 3453760215
effective search space used: 3453760215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)