BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010520
(508 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 567 bits (1462), Expect = e-162, Method: Compositional matrix adjust.
Identities = 275/502 (54%), Positives = 350/502 (69%), Gaps = 2/502 (0%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GLS + PG + NG W G ++S P NN+ IA V +A+L +YEE ++
Sbjct: 9 KYSWLKELGLSEDNPGVY-NGSWGGSGEVITSYCPANNEPIARVTQATLAEYEETVQKTR 67
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA K+W ++PAPKRGE+VRQIGDALR+K+ LG L+S+EMGKI EG+GEVQE +D+CD+
Sbjct: 68 EAWKMWADIPAPKRGEIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGVGEVQEYVDVCDY 127
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G V+PSERP H ++E WNP+G+VG+ITAFNFP AV GWN IAL CGN +
Sbjct: 128 AVGLSRMIGGPVLPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIALTCGNVCL 187
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKG K+V+EV E+N LPGAI + CGGA+IG A+AKD R+ L+SFTGST
Sbjct: 188 WKGAPTTPLTSVAVTKIVAEVLEQNNLPGAICSMTCGGADIGTAMAKDERVDLLSFTGST 247
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRL 306
VG MV V +RFG+ LLEL GNN L V S +FA+VGTAGQRCTT RRL
Sbjct: 248 HVGKMVAMMVQERFGRKLLELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRL 307
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
++HES++ V++++ YKQV+IGDP + TL GPLHT ++ + IE K QGG ++
Sbjct: 308 MLHESVHDAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLV 367
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PTI+ ++ A IV E F P+LYV+KF+T EEA NN V QGLS
Sbjct: 368 CGGKVMDRPGNYVEPTIITGLAHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLS 427
Query: 426 SSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQY 485
SSIFT+ +F+WLGP GSD GIVNVNIPT+GAEI SDSWKQY
Sbjct: 428 SSIFTKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQY 487
Query: 486 MRRSTCTINYGNELPLAQGINF 507
MRRSTCTINY +LPLAQGI F
Sbjct: 488 MRRSTCTINYSKDLPLAQGIKF 509
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 540 bits (1391), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/490 (53%), Positives = 334/490 (68%), Gaps = 2/490 (0%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GL E G + NG W G +++ P NN+ IA V +AS+ DYEE +K
Sbjct: 11 QYAWLKELGLREENEGVY-NGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAR 69
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA KIW ++PAPKRGE+VRQIGDALREK+ LG L+S+EMGKIL EG+GEVQE +D+CD+
Sbjct: 70 EAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDY 129
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G ++PSER H ++E WNP+G+VG+ITAFNFP AV GWN IA++CGN +
Sbjct: 130 AVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCL 189
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKG K++++V E NKLPGAI + CGGA+IG A+AKD R++L+SFTGST
Sbjct: 190 WKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGST 249
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFG+ LLEL GNN L V S LFAAVGTAGQRCTT RRL
Sbjct: 250 QVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRL 309
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
IHESI+ V+++L Y Q+++G+P + L GPLHT ++ F +E K +GG ++
Sbjct: 310 FIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVV 369
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PTIV + A I E FAP+LYV KFQ EE NN V QGLS
Sbjct: 370 YGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLS 429
Query: 426 SSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQY 485
SSIFT+ IF+WLGP GSD GIVNVNIPT+GAEI SD+WKQY
Sbjct: 430 SSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQY 489
Query: 486 MRRSTCTINY 495
MRRSTCTINY
Sbjct: 490 MRRSTCTINY 499
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 201/415 (48%), Gaps = 11/415 (2%)
Query: 24 FVNGK---WKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
+++G+ W+ + +NP I+ + + ED + + A A W LPA +R
Sbjct: 10 YIDGQFVTWRGDA-WIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIER 68
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
+R+I +RE+ + L+ E GKI EV D D+ +R+ G +I
Sbjct: 69 ASWLRKISAGIRERATEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQ 128
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXX 200
S+RP +L LGV I +NFP ++ AL+ GN +V K
Sbjct: 129 SDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAF 188
Query: 201 XKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
K+V E+ LP +F G G +GQ +A +P++++VS TGS G + T +
Sbjct: 189 AKIVDEI----GLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKN 244
Query: 260 FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319
K LEL G +LAV++++ + V +GQ C R+ + + IY +++
Sbjct: 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 320 LVDVYKQVKIGDPLEKGTL-LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNF 378
L + + V+ G+P E+ + +GPL + + E+ + +G ++ GG +E +G +
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYY 364
Query: 379 VQPT-IVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
PT ++++ I+ EE F PVL V+ F T EEA+ + N GL+SSI+T++
Sbjct: 365 YPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQN 419
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 199/414 (48%), Gaps = 10/414 (2%)
Query: 22 GCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
G FV W+ + +NP I+ + + ED + + A A W LPA +R
Sbjct: 13 GQFVT--WRGDA-WIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERA 69
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
+R+I +RE+ + L+ E GKI EV D D+ +R+ G +I S
Sbjct: 70 SWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQS 129
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXX 201
+RP +L LGV I +NFP ++ AL+ GN +V K
Sbjct: 130 DRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFA 189
Query: 202 KLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
K+V E+ LP +F G G +GQ +A +P++++VS TGS G + T +
Sbjct: 190 KIVDEI----GLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNI 245
Query: 261 GKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
K LEL G +LAV++++ + V +GQ C R+ + + IY +++L
Sbjct: 246 TKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRL 305
Query: 321 VDVYKQVKIGDPLEKGTL-LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFV 379
+ + V+ G+P E+ + +GPL + + E+ + +G ++ GG +E +G +
Sbjct: 306 GEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYY 365
Query: 380 QPT-IVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
PT ++++ I+ EE F PVL V+ F T E+A+ + N GL+SSI+T++
Sbjct: 366 PPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 201/415 (48%), Gaps = 11/415 (2%)
Query: 24 FVNGK---WKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
+++G+ W+ + +NP I+ + + ED + + A A W LPA +R
Sbjct: 10 YIDGQFVTWRGDA-WIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIER 68
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
+R+I +RE+ + L+ E GKI EV D D+ +R+ G +I
Sbjct: 69 ASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQ 128
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXX 200
S+RP +L LGV I +NFP ++ AL+ GN +V K
Sbjct: 129 SDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAF 188
Query: 201 XKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
K+V E+ LP +F G G +GQ +A +P++++VS TGS G + T +
Sbjct: 189 AKIVDEI----GLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKN 244
Query: 260 FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319
K LEL G +LAV++++ + V +GQ C R+ + + IY +++
Sbjct: 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 320 LVDVYKQVKIGDPLEKGTL-LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNF 378
L + + V+ G+P E+ + +GPL + + E+ + +G ++ GG +E +G +
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYY 364
Query: 379 VQPT-IVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
PT ++++ I+ EE F PVL V+ F T E+A+ + N GL+SSI+T++
Sbjct: 365 YPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 210/437 (48%), Gaps = 19/437 (4%)
Query: 11 LSEIGLSPETPGCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEAS 69
L E L E P +NG+ + S NP +Q + +V +A+ + E+ +++ EA
Sbjct: 29 LVEKELGKEYP-LIINGERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAF 87
Query: 70 KIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVG 129
+ W + +R ++ + +R + H L E GK E + E ID ++
Sbjct: 88 QTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYAR 147
Query: 130 LSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKG 189
+LN RP + P+GV I+ +NF A++ A +V GN VV K
Sbjct: 148 QMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLK- 206
Query: 190 XXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKV 248
K V EV E LP + G GAE+G + P+ SL++FTGS V
Sbjct: 207 --PASTTPVVAAKFV-EVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDV 263
Query: 249 GLMVQQTV------HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTT 302
G+ + + + ++E+ G + LA S+L +A G +GQ+C+
Sbjct: 264 GVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSA 323
Query: 303 CRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIK--S 360
R +IH+ +Y VL++ V + K + +GDP + +GP+ K FEK + I+
Sbjct: 324 GSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVI---DEKAFEKIMSYIEIGK 380
Query: 361 QGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS 419
+ G+++TGG S G F+QPTI+ ++ P A I++EE+F PV+ K F+ A++I N+
Sbjct: 381 KEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANN 440
Query: 420 VPQGLSSSIFTRSPENI 436
GL+ ++ TR+ +I
Sbjct: 441 TEYGLTGAVITRNRAHI 457
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 200/438 (45%), Gaps = 13/438 (2%)
Query: 23 CFVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
+NG+W +G + NP N K+ +V + ++ + A + A W L A +R
Sbjct: 12 ALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKER 71
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
++R + + E L RL+++E GK L E GE+ ++ +++ G IP
Sbjct: 72 ATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIP 131
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXX 200
+ + ++ P+GV IT +NFP A++ A AL G +V K
Sbjct: 132 GHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALA- 190
Query: 201 XKLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
++E+ R +P +F G A +G + +P + +SFTGST++G + + +
Sbjct: 191 ---LAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKD 247
Query: 260 FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319
K LEL GN AV L + AGQ C RL + + +Y ++
Sbjct: 248 IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK 307
Query: 320 LVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFV 379
L ++ IGD L+ G +GPL ++ E+ I + +G +++ GG E GNF
Sbjct: 308 LQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFF 367
Query: 380 QPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
QPTI V++ A + KEE F P+ + +F+ + + N GL++ + R +F+
Sbjct: 368 QPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFR 427
Query: 439 -----WLGPHGSDTGIVN 451
G G +TGI++
Sbjct: 428 VGEALEYGIVGINTGIIS 445
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 200/438 (45%), Gaps = 13/438 (2%)
Query: 23 CFVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
+NG+W +G + NP N K+ +V + ++ + A + A W L A +R
Sbjct: 12 ALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKER 71
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
++R + + E L RL+++E GK L E GE+ ++ +++ G IP
Sbjct: 72 ATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIP 131
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXX 200
+ + ++ P+GV IT +NFP A++ A AL G +V K
Sbjct: 132 GHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALA- 190
Query: 201 XKLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
++E+ R +P +F G A +G + +P + +SFTGST++G + + +
Sbjct: 191 ---LAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKD 247
Query: 260 FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319
K LEL GN AV L + AGQ C RL + + +Y ++
Sbjct: 248 IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK 307
Query: 320 LVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFV 379
L ++ IGD L+ G +GPL ++ E+ I + +G +++ GG E GNF
Sbjct: 308 LQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFF 367
Query: 380 QPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
QPTI V++ A + KEE F P+ + +F+ + + N GL++ + R +F+
Sbjct: 368 QPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFR 427
Query: 439 -----WLGPHGSDTGIVN 451
G G +TGI++
Sbjct: 428 VGEALEYGIVGINTGIIS 445
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 184 bits (468), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 196/425 (46%), Gaps = 19/425 (4%)
Query: 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPAPK 79
F++G+W+ + INP + I + A+ ED E + A A + W
Sbjct: 11 FIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSGAH 70
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGS-- 137
R +R I + EK H +L +I+ GK E + ++ +V ++ G + L+G
Sbjct: 71 RATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALDGKQK 130
Query: 138 ---VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXX 194
+P ER +L PLGVVG+I+ +N+P + W AL G V K
Sbjct: 131 APVTLPMERFKSHVLR--QPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELAS 188
Query: 195 XXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253
++ +EV LP + G G + G + P + ++FTGS+ G V
Sbjct: 189 VTCLEFGEVCNEV----GLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVM 244
Query: 254 QTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+ Q LEL G + V +F T GQ C+ RLL+HESI
Sbjct: 245 ASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIA 304
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
+D+LV K +KI DP E+G LGP+ + K I KS+G IL GGS E
Sbjct: 305 AEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPE 364
Query: 374 --SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+G +++PTIV +IS + I KEE+F PVL V F + +EA+ + N GL++++F+
Sbjct: 365 HLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFS 424
Query: 431 RSPEN 435
E
Sbjct: 425 NDLER 429
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 201/419 (47%), Gaps = 14/419 (3%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
+++G+W A+ T INP N + I TV E + ED E + A A S W + A
Sbjct: 36 YIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAET 95
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
RG+ VR I D ++E L RL +++ GK L E ++ ++ ++ + GL+ + G +I
Sbjct: 96 RGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMI 155
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXX 199
S P+ P+GVV IT +N+P W AL G +V K
Sbjct: 156 DSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIR 215
Query: 200 XXKLVSEV-FERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
+L+ EV F + G I G+E+G ++ + LVSFTG + G + +
Sbjct: 216 VFELMEEVGFPK----GTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAAN 271
Query: 259 RFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318
LEL G N +LAV L AGQ C+ R+L+ SI
Sbjct: 272 NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQ 331
Query: 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----S 374
L+D K++K+G+ + T +GP+ + E R E ++ K++G I GG +
Sbjct: 332 ALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLK 391
Query: 375 EGNFVQPTIVEISPTA-DIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
+G F +PT++ T+ IV+EE+F PV+ V F+T +EA+++ N GL+ ++F++
Sbjct: 392 DGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKD 450
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 203/418 (48%), Gaps = 10/418 (2%)
Query: 23 CFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
F++GKW + + INP + + I + S E+ +E + + ++ LP KR
Sbjct: 2 MFIDGKW-INREDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYN 60
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE 142
++ I ++EK L ++L+I+ GK + + EV+ I A ++ VIPS+
Sbjct: 61 ILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPSD 120
Query: 143 RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXK 202
+ ++ P+G+VG IT FNFP + A+ GN +V K
Sbjct: 121 --DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAK 178
Query: 203 LVSEVFERNKLPGAIFTSFCGGAEI-GQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261
++ ++ +P ++ G E+ G I + +++++SFTGS+KVG ++ T F
Sbjct: 179 IIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELI--TKKAGFK 236
Query: 262 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321
K LEL G N AV +++ + AGQ C + +L+ ESI ++ V
Sbjct: 237 KIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFV 296
Query: 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQP 381
+ K + +G+PL++ T +GPL + E + EK +E +GGK+L GG + + P
Sbjct: 297 NKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGG---KRDKALFYP 353
Query: 382 TIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKW 439
TI+E+ + K E FAPV+ +++ EE + I NS GL S+IFT K+
Sbjct: 354 TILEVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKF 410
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 201/429 (46%), Gaps = 24/429 (5%)
Query: 24 FVNGKWKAH--GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-----SKIWMELP 76
F++G+W+ + +INP I + A+ ED + + A A + W
Sbjct: 11 FIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGRDWSAAS 70
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136
R +R I ++EK LG+L SI+ GK L E + ++ +V+ ++ GL+ +L+
Sbjct: 71 GSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEEALADLDDVVACFEYYAGLAEELDS 130
Query: 137 SVIPSERPNHMMLETWN------PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGX 190
+ P + ++T+ P+GVV +IT +N+P + W AL G + K
Sbjct: 131 K---QKAPISLPMDTFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKPS 187
Query: 191 XXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG 249
++ EV LP + G G E G ++A P + +SFTGS+ G
Sbjct: 188 ELASVTCLELGEICKEV----GLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATG 243
Query: 250 LMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
+ T Q LEL G + +F T GQ C+ RL++H
Sbjct: 244 SKIMTTAAQLVKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVH 303
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369
ESI +D+LV + +KI DPLE+G LGP+ + K I + KS+G ILTGG
Sbjct: 304 ESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGG 363
Query: 370 SVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSS 426
E +G FV+PTI+ +++ + I +EE+F PVL V F T EEA+ + N GL S
Sbjct: 364 RRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGS 423
Query: 427 SIFTRSPEN 435
++ + E
Sbjct: 424 AVMSNDLER 432
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 203/410 (49%), Gaps = 14/410 (3%)
Query: 36 VSSINPVNNQKIATVVEASLEDY-EEGMKACSEASKIWMELPAPKRGEVVRQIGDALREK 94
+ SINP N +++ V + +D+ E+ ++A ++A + W +R V+ + +R K
Sbjct: 53 IVSINPANKEEVVGTVSKATQDHAEKAIQAAAKAFETWRYTDPEERAAVLFRAVAKVRRK 112
Query: 95 LHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNP 154
H LL E GK E + E ID ++ +L + R + P
Sbjct: 113 KHEFSALLVKEAGKPWNEADADTAEAIDFMEYYARQMIELAKGKPVNSREGERNQYVYTP 172
Query: 155 LGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLP 214
GV VI +NF A++ +V GN VV K K V EV E + LP
Sbjct: 173 TGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLK---PASAAPVIAAKFV-EVLEESGLP 228
Query: 215 GAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ------RFGKCLLEL 267
+ G GAE+G + P+ S+++FTGS +VG + + + + + E+
Sbjct: 229 KGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEM 288
Query: 268 SGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQV 327
G + +LA +S+ +A G AGQ+C+ R ++HE +Y VL +++++ +
Sbjct: 289 GGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESK 348
Query: 328 KIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTI-VEI 386
K+G+P +GP+ S IE I + G++++GG +S+G F++PTI ++
Sbjct: 349 KVGEPDSADVYMGPVIDQASFNKIMDYIE-IGKEEGRLVSGGKGDDSKGYFIEPTIFADL 407
Query: 387 SPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENI 436
P A +++EE+F PV+ K +F+EA+++ N+ GL+ ++ T++ ++I
Sbjct: 408 DPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHI 457
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 195/429 (45%), Gaps = 24/429 (5%)
Query: 24 FVNGKWKAH--GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-----SKIWMELP 76
F+NG WKA + INP I + A+ ED + + A A W
Sbjct: 11 FINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATAS 70
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136
R +R I + EK L +L SI+ GK L E ++ +V ++ L+ +L+
Sbjct: 71 GAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDA 130
Query: 137 SVIPSERPNHMMLETWN------PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGX 190
+ P + ++T+ P+GVVG+IT +N+P + W AL G + K
Sbjct: 131 R---QKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPS 187
Query: 191 XXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG 249
++ EV LP + G G E G +A P + V+FTGS+ G
Sbjct: 188 ELASLTCLELGEICKEV----GLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243
Query: 250 LMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
+ Q LEL G + A +F T GQ C+ RL++H
Sbjct: 244 SKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILH 303
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369
ESI L+++V K +KI DPLE+G LGP+ + + K + N KS+G ILTGG
Sbjct: 304 ESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGG 363
Query: 370 SVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSS 426
S E +G F++PTI+ +++ I +EE+F PVL V F T EEA+ + N GL +
Sbjct: 364 SRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGA 423
Query: 427 SIFTRSPEN 435
++ + E
Sbjct: 424 AVISNDLER 432
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 211/445 (47%), Gaps = 17/445 (3%)
Query: 19 ETPGCFVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELP 76
E ++ G++ + G T +INP N + +A V AS ED E +++ E K+W +
Sbjct: 5 EEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMT 64
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLN 135
A +R ++R+ D LRE+ L L +++ GK L E ++ D+ ++ GL +
Sbjct: 65 AMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIE 124
Query: 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXX 195
G IP R + PLGVV I A+N+P + W + AL GN +++K
Sbjct: 125 GEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPL 183
Query: 196 XXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
++E++ +P +F G G E+GQ + + P I +SFTG T G V
Sbjct: 184 TALK----LAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 239
Query: 255 TV-HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+ + +EL G + A + A ++GQ CT R+ IH S
Sbjct: 240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 299
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
++++ +++++GDP ++ T GPL + ++ IE+ K+Q ++L GG +
Sbjct: 300 ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVT 359
Query: 374 S----EGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
+G +V PT+ + IV+EE+F PV+ ++ + +EA++ N GL++ +
Sbjct: 360 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 419
Query: 429 FTRSPENIFKWLGPHGSDTGIVNVN 453
T+ + + H + GI +N
Sbjct: 420 VTQDLARAHRAI--HRLEAGICWIN 442
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 211/445 (47%), Gaps = 17/445 (3%)
Query: 19 ETPGCFVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELP 76
E ++ G++ + G T +INP N + +A V AS ED E +++ E K+W +
Sbjct: 4 EEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMT 63
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLN 135
A +R ++R+ D LRE+ L L +++ GK L E ++ D+ ++ GL +
Sbjct: 64 AMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIE 123
Query: 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXX 195
G IP R + PLGVV I A+N+P + W + AL GN +++K
Sbjct: 124 GEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPL 182
Query: 196 XXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
++E++ +P +F G G E+GQ + + P I +SFTG T G V
Sbjct: 183 TALK----LAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 238
Query: 255 TV-HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+ + +EL G + A + A ++GQ CT R+ IH S
Sbjct: 239 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 298
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
++++ +++++GDP ++ T GPL + ++ IE+ K+Q ++L GG +
Sbjct: 299 ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVT 358
Query: 374 S----EGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
+G +V PT+ + IV+EE+F PV+ ++ + +EA++ N GL++ +
Sbjct: 359 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 418
Query: 429 FTRSPENIFKWLGPHGSDTGIVNVN 453
T+ + + H + GI +N
Sbjct: 419 VTQDLARAHRAI--HRLEAGICWIN 441
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 210/478 (43%), Gaps = 12/478 (2%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++NG+W +NP + + V ++ ED + + +EA K W ++ P+R
Sbjct: 9 YINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRA 68
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
++ L + L L++IE GK E +GEV I+ +FA G + G + S
Sbjct: 69 RILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLAS 128
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXX 201
+ P+GVVG I FNFP V W +A+ GN + K
Sbjct: 129 IATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILK---PSERTPLLTE 185
Query: 202 KLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261
KLV E+FE+ LP +F G ++ I + P I +SF GS VG V + +
Sbjct: 186 KLV-ELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLK 244
Query: 262 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321
+ N + V +++ AA G+AG+RC C + + E I + +L
Sbjct: 245 RVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQ 304
Query: 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV-IESEGNFVQ 380
+ +KIG+ L+ G LGP+ +++K IE +G +++ G + +G FV
Sbjct: 305 EKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVG 364
Query: 381 PTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKW 439
PTI + ++ I K+E+FAPVL V++ + +EA++I N + +FT S N ++
Sbjct: 365 PTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFT-SNSNAIRY 423
Query: 440 LGPHGSDTGI--VNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRSTCTINY 495
D G+ +N+ +P A DS Y R+ T Y
Sbjct: 424 F-RENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 210/445 (47%), Gaps = 17/445 (3%)
Query: 19 ETPGCFVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELP 76
E ++ G++ + G T +INP N + +A V AS ED E +++ E K+W +
Sbjct: 4 EEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMT 63
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLN 135
A +R ++R+ D LRE+ L L +++ GK L E ++ D+ ++ GL +
Sbjct: 64 AMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIE 123
Query: 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXX 195
G IP R + PLGVV I A+N+P + W + AL GN +++K
Sbjct: 124 GEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPL 182
Query: 196 XXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
++E++ +P +F G G E+GQ + + P I +SFTG T G V
Sbjct: 183 TALK----LAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 238
Query: 255 TV-HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+ + + L G + A + A ++GQ CT R+ IH S
Sbjct: 239 SASSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 298
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
++++ +++++GDP ++ T GPL + ++ IE+ K+Q ++L GG +
Sbjct: 299 ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVT 358
Query: 374 S----EGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
+G +V PT+ + IV+EE+F PV+ ++ + +EA++ N GL++ +
Sbjct: 359 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 418
Query: 429 FTRSPENIFKWLGPHGSDTGIVNVN 453
T+ + + H + GI +N
Sbjct: 419 VTQDLARAHRAI--HRLEAGICWIN 441
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 210/445 (47%), Gaps = 17/445 (3%)
Query: 19 ETPGCFVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELP 76
E ++ G++ + G T +INP N + +A V AS ED E +++ E K+W +
Sbjct: 5 EEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMT 64
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLN 135
A +R ++R+ D LRE+ L L +++ GK L E ++ D+ ++ GL +
Sbjct: 65 AMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIE 124
Query: 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXX 195
G IP R + PLGVV I A+N+P + W + AL GN +++K
Sbjct: 125 GEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPL 183
Query: 196 XXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
++E++ +P +F G G E+GQ + + P I +SFTG T G V
Sbjct: 184 TALK----LAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 239
Query: 255 TV-HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+ + +EL G + A + A ++GQ T R+ IH S
Sbjct: 240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQ 299
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
++++ +++++GDP ++ T GPL + ++ IE+ K+Q ++L GG +
Sbjct: 300 ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVT 359
Query: 374 S----EGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
+G +V PT+ + IV+EE+F PV+ ++ + +EA++ N GL++ +
Sbjct: 360 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 419
Query: 429 FTRSPENIFKWLGPHGSDTGIVNVN 453
T+ + + H + GI +N
Sbjct: 420 VTQDLARAHRAI--HRLEAGICWIN 442
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 210/445 (47%), Gaps = 17/445 (3%)
Query: 19 ETPGCFVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELP 76
E ++ G++ + G T +INP N + +A V AS ED E +++ E K+W +
Sbjct: 5 EEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMT 64
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLN 135
A +R ++R+ D LRE+ L L +++ GK L E ++ D+ ++ GL +
Sbjct: 65 AMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIE 124
Query: 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXX 195
G IP R + PLGVV I A+N+P + W + AL GN +++K
Sbjct: 125 GEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPL 183
Query: 196 XXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
++E++ +P +F G G E+GQ + + P I +SFTG T G V
Sbjct: 184 TALK----LAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 239
Query: 255 TV-HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+ + +EL G + A + A ++GQ T R+ IH S
Sbjct: 240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQ 299
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
++++ +++++GDP ++ T GPL + ++ IE+ K+Q ++L GG +
Sbjct: 300 ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVT 359
Query: 374 S----EGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
+G +V PT+ + IV+EE+F PV+ ++ + +EA++ N GL++ +
Sbjct: 360 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 419
Query: 429 FTRSPENIFKWLGPHGSDTGIVNVN 453
T+ + + H + GI +N
Sbjct: 420 VTQDLARAHRAI--HRLEAGICWIN 442
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 210/445 (47%), Gaps = 17/445 (3%)
Query: 3 FAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEG 61
F K + +++G +T F+NGK + ++NP ++ + + +A + +
Sbjct: 517 FPKHIAQVRTQLG---KTYPLFINGKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDA 573
Query: 62 MKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVI 121
+ A A W + R E + + A R++L L +E+GK + +V E I
Sbjct: 574 IAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAI 633
Query: 122 DMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVC 181
D ++ +L P + + P GV VI +NFP A+ A A+V
Sbjct: 634 DFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVT 693
Query: 182 GNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLV 240
GNCVV+K + E+F LP +F G G+ +G + P ISL+
Sbjct: 694 GNCVVFKPSGITSIIGWH----LVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLI 749
Query: 241 SFTGSTKVGLMVQQ---TVH---QRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVG 294
+FTGS + GL + + VH K + E+ G N AV VL++A G
Sbjct: 750 AFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFG 809
Query: 295 TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG 354
GQ+C+ C R+++ +++Y +++LV + K K+G + +G + ++ K+ ++
Sbjct: 810 FQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEY 869
Query: 355 IENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413
E I + G +L V EG FV TI+ I P I +EE+F PVL VM+ + F++A
Sbjct: 870 AE-IGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQA 928
Query: 414 VKINNSVPQGLSSSIFTRSPENIFK 438
++ NS L+ IF+RSPE++ K
Sbjct: 929 IEWANSTQFALTGGIFSRSPEHLAK 953
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 185/417 (44%), Gaps = 12/417 (2%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W G T NP +KI V EA ED ++ +KA EA ++ W + A
Sbjct: 24 FINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDAS 83
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGS 137
+RG+++ ++ D + L L SI GK+ + ++ I + G + ++ G
Sbjct: 84 ERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGR 143
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXX 197
IP + P+GV G+I +N P +L AL CGN V+ K
Sbjct: 144 TIPVDG-EFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTA 202
Query: 198 XXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
L+ E PG + G G AI+ + V+FTGST+VG M+Q+
Sbjct: 203 LHVASLIKEA---GFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAA 259
Query: 258 Q-RFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ + LEL N AV GQ C +L + E+IY
Sbjct: 260 KSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIYDEF 319
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+ + V+ K+ G+PL G GP + IE+ K +G K+ GG ++G
Sbjct: 320 VQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKG 379
Query: 377 NFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
F+QPT+ ++ I KEE+F PV +MKF++ +E +K N+ GL + +FT+
Sbjct: 380 YFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKD 436
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 184/417 (44%), Gaps = 12/417 (2%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W T ++NP + I V E ED ++ +KA A ++ W + A
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGS 137
RG ++ ++ D + +L L +++ GK + + ++ V+ + G + + +G
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXX 197
IP + + P+GV G I +NFP + W AL GN VV K
Sbjct: 143 TIPIDG-DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 198 XXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV- 256
L+ E PG + G G AIA + V+FTGST++G ++Q
Sbjct: 202 LYVANLIKEA---GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 258
Query: 257 HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ L+L G + AV FA GQ C+ R + E IY
Sbjct: 259 SSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDEF 318
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+++ V K +G+P + T GP K I K +G K+L GG + G
Sbjct: 319 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG 378
Query: 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
F+QPT+ ++ I KEE+F PV+ ++KF+T EE V N+ GL++++FT+
Sbjct: 379 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKD 435
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 183/417 (43%), Gaps = 12/417 (2%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W T ++NP + I V E ED ++ +KA A ++ W + A
Sbjct: 17 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 76
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGS 137
RG ++ ++ D + +L L +++ GK + + ++ V+ + G + + +G
Sbjct: 77 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 136
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXX 197
IP + + P+GV G I +NFP + W AL GN VV K
Sbjct: 137 TIPIDG-DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 195
Query: 198 XXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV- 256
L+ E PG + G G AIA + V+FTGST++G ++Q
Sbjct: 196 LYVANLIKEA---GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 252
Query: 257 HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ LEL G + AV FA GQ C R + E IY
Sbjct: 253 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEF 312
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+++ V K +G+P + T GP K I K +G K+L GG + G
Sbjct: 313 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG 372
Query: 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
F+QPT+ ++ I KEE+F PV+ ++KF+T EE V N+ GL++++FT+
Sbjct: 373 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKD 429
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 183/417 (43%), Gaps = 12/417 (2%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W T ++NP + I V E ED ++ +KA A ++ W + A
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGS 137
RG ++ ++ D + +L L +++ GK + + ++ V+ + G + + +G
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXX 197
IP + + P+GV G I +NFP + W AL GN VV K
Sbjct: 143 TIPIDG-DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 198 XXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV- 256
L+ E PG + G G AIA + V+FTGST++G ++Q
Sbjct: 202 LYVANLIKEA---GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 258
Query: 257 HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ LEL G + AV FA GQ C R + E IY
Sbjct: 259 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEF 318
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+++ V K +G+P + T GP K I K +G K+L GG + G
Sbjct: 319 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG 378
Query: 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
F+QPT+ ++ I KEE+F PV+ ++KF+T EE V N+ GL++++FT+
Sbjct: 379 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKD 435
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 183/417 (43%), Gaps = 12/417 (2%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W T ++NP + I V E ED ++ +KA A ++ W + A
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGS 137
RG ++ ++ D + +L L +++ GK + + ++ V+ + G + + +G
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXX 197
IP + + P+GV G I +NFP + W AL GN VV K
Sbjct: 143 TIPIDG-DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 198 XXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV- 256
L+ E PG + G G AIA + V+FTGST++G ++Q
Sbjct: 202 LYVANLIKEA---GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 258
Query: 257 HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ LEL G + AV FA GQ C R + E IY
Sbjct: 259 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEF 318
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+++ V K +G+P + T GP K I K +G K+L GG + G
Sbjct: 319 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG 378
Query: 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
F+QPT+ ++ I KEE+F PV+ ++KF+T EE V N+ GL++++FT+
Sbjct: 379 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKD 435
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 183/417 (43%), Gaps = 12/417 (2%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W T ++NP + I V E ED ++ +KA A ++ W + A
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGS 137
RG ++ ++ D + +L L +++ GK + + ++ V+ + G + + +G
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXX 197
IP + + P+GV G I +NFP + W AL GN VV K
Sbjct: 143 TIPIDG-DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 198 XXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV- 256
L+ E PG + G G AIA + V+FTGST++G ++Q
Sbjct: 202 LYVANLIKEA---GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 258
Query: 257 HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ LEL G + AV FA GQ C R + E IY
Sbjct: 259 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEF 318
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+++ V K +G+P + T GP K I K +G K+L GG + G
Sbjct: 319 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG 378
Query: 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
F+QPT+ ++ I KEE+F PV+ ++KF+T EE V N+ GL++++FT+
Sbjct: 379 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKD 435
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 197/424 (46%), Gaps = 24/424 (5%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-----IWMELP 76
FV+G+W+ A G + +NP I + + ED + + A A K W P
Sbjct: 28 FVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGRDWARAP 87
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVID----MCDFAVGLSR 132
R + +R I + E+ L +L +++ GK E ++ +V D A L +
Sbjct: 88 GAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQAEALDK 147
Query: 133 QLNGSV-IPSER-PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGX 190
+ N V +P E H+ E P+GVVG+IT +N+P + W AL G V K
Sbjct: 148 RQNSPVSLPMETFKCHLRRE---PIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPS 204
Query: 191 XXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG 249
+ EV LP + G G + G ++ P + V+FTGS + G
Sbjct: 205 ELASVTCLELADICKEV----GLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETG 260
Query: 250 LMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
+ + LEL G + AV LF T GQ C+ RLLIH
Sbjct: 261 KKIMASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIH 320
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369
I + +++V K +K+ DPLE+G LGP+ + + +K I N KSQG ILTGG
Sbjct: 321 TKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGG 380
Query: 370 --SVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSS 426
+G F++PTI+ +I+ + +I +EE+F PVL V +F T +EA+++ N GL+
Sbjct: 381 VRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAG 440
Query: 427 SIFT 430
++ +
Sbjct: 441 AVIS 444
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 187/415 (45%), Gaps = 12/415 (2%)
Query: 24 FVNGKWKAH--GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W + G NP +K+ V E ED ++ +KA +A +I W + A
Sbjct: 24 FINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDAS 83
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGS 137
+RG ++ ++ D + L + ++ GK+ + ++ I + G + ++ G
Sbjct: 84 ERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGR 143
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXX 197
IP + N P+GV G I +NFP + W AL CGN VV K
Sbjct: 144 TIPMDG-NFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTA 202
Query: 198 XXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV- 256
L+ E PG + G G AI+ + V+FTGST+VG ++++
Sbjct: 203 LHMGSLIKEA---GFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 259
Query: 257 HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ LEL G + AV GQ C RL + ESIY
Sbjct: 260 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEF 319
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+ + V+ K+ +G+PL G GP E + IE+ K +G K+ GG ++G
Sbjct: 320 VRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKG 379
Query: 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
F+QPT+ +++ I KEE+F PV +MKF++ ++ +K N+ GLS+ IFT
Sbjct: 380 YFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFT 434
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 201/426 (47%), Gaps = 20/426 (4%)
Query: 23 CFVNGKWKAHGPTVSSINP-VNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++ G+W + S+NP ++ + T +A + E ++A +A K W + P R
Sbjct: 40 LYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRS 99
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF---AVGLSRQLNGSV 138
++ + +R + L L E+GK E +V E ID ++ A R V
Sbjct: 100 RLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEV 159
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXX 198
+P P + PLG VI +NFP A+ + GN V+ K
Sbjct: 160 VPY--PGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA 217
Query: 199 XXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV- 256
V E+F P + G G E+G + + PRI ++FTGS +VGL + +
Sbjct: 218 K----VFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAG 273
Query: 257 -----HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHES 311
F + +E G N LA V+ +A G GQ+C+ RL++ +
Sbjct: 274 RLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQG 333
Query: 312 IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV 371
Y+ VL++++ +++ +G P E+ LGP+ + E + IE K++G +++ GG
Sbjct: 334 AYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKR 391
Query: 372 IESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+E EG F+ PT+ E+ P A I +EE+F PVL V++ + F EA+++ N P GL+ +++
Sbjct: 392 LEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYS 451
Query: 431 RSPENI 436
R E++
Sbjct: 452 RKREHL 457
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 203/442 (45%), Gaps = 18/442 (4%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
++ G+W+ + INP + I + A+ ED + ++A +A W +
Sbjct: 27 YIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGSTTGAQ 86
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R + +R I + EK L L S++ GK L E ++ +V ++ GL+ L+ +
Sbjct: 87 RAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYAGLAEALDSRRM 146
Query: 140 PSERPNHMMLETW---NPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXX 196
N +++ PLGVVG+IT +N+P + W AL G + K
Sbjct: 147 TPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASIT 206
Query: 197 XXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255
++ E+ LP G G E G +A P + +SFTGS G +
Sbjct: 207 CLELGEICREI----GLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTA 262
Query: 256 VHQRFGKCLLELSGNN-XXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
Q LEL G + +A LF GQ C+ RL++ E+I
Sbjct: 263 AAQLVKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIAS 322
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE- 373
+D+L+ K +KI DPLE+ LGP+ + + K I N KS+G IL GG +
Sbjct: 323 AFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQH 382
Query: 374 -SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+G +VQPTI+ +++ + +I KEE+F PVL V F+T E+A+++ N GL +++ ++
Sbjct: 383 LKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSK 442
Query: 432 SPENIFKWLGPHGSDTGIVNVN 453
+ ++ TGI+ +N
Sbjct: 443 DVKRCERFT--KAFQTGIIWIN 462
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 182/417 (43%), Gaps = 12/417 (2%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W T ++NP + I V E ED ++ +KA A ++ W + A
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGS 137
RG ++ ++ D + +L L +++ GK + + ++ V+ + G + + +G
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXX 197
IP + + P+GV G I +NFP + W AL GN VV K
Sbjct: 143 TIPIDG-DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 198 XXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV- 256
L+ E PG + G G AIA + V+F GST++G ++Q
Sbjct: 202 LYVANLIKEA---GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAAG 258
Query: 257 HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ LEL G + AV FA GQ C R + E IY
Sbjct: 259 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEF 318
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+++ V K +G+P + T GP K I K +G K+L GG + G
Sbjct: 319 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG 378
Query: 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
F+QPT+ ++ I KEE+F PV+ ++KF+T EE V N+ GL++++FT+
Sbjct: 379 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKD 435
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 196/414 (47%), Gaps = 17/414 (4%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
+VNG+WK + P + ++ +V S E+ + + +A W L +R
Sbjct: 8 YVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAY 67
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAV--GLSRQ---LNGSV 138
+ ++ D L +G +LS E+ K + EV ++ ++A GL + L G
Sbjct: 68 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 127
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXX 198
+ + + P+G+V I+ FN+P + G AL+ GN + +K
Sbjct: 128 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL 187
Query: 199 XXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
L++E F LP +F + G G+EIG I + ++ ++FTGST +G + +
Sbjct: 188 ----LLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG 243
Query: 258 QRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
R +LEL G + +L ++++ A G +GQRCT +R+L+ ES+ ++
Sbjct: 244 MR--PIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 301
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN 377
+++ + + IG+P E + PL +S E I + +G LT I+ EGN
Sbjct: 302 EKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTE---IKREGN 357
Query: 378 FVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+ P + + ++ + EE F PVL +++ + EEA++I+N GL +SIFT
Sbjct: 358 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFT 411
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 201/426 (47%), Gaps = 20/426 (4%)
Query: 23 CFVNGKWKAHGPTVSSINP-VNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++ G+W + S+NP ++ + T +A + E ++A +A K W + P R
Sbjct: 40 LYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRS 99
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF---AVGLSRQLNGSV 138
++ + +R + L L E+GK E +V E ID ++ A R V
Sbjct: 100 RLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEV 159
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXX 198
+P P + PLG VI +NFP A+ + GN V+ K
Sbjct: 160 VPY--PGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA 217
Query: 199 XXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV- 256
V E+F P + G G E+G + + PRI ++FTGS +VGL + +
Sbjct: 218 K----VFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAG 273
Query: 257 -----HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHES 311
F + +E G + LA V+ +A G GQ+C+ RL++ +
Sbjct: 274 RLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQG 333
Query: 312 IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV 371
Y+ VL++++ +++ +G P E+ LGP+ + E + IE K++G +++ GG
Sbjct: 334 AYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKR 391
Query: 372 IESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+E EG F+ PT+ E+ P A I +EE+F PVL V++ + F EA+++ N P GL+ +++
Sbjct: 392 LEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYS 451
Query: 431 RSPENI 436
R E++
Sbjct: 452 RKREHL 457
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 187/435 (42%), Gaps = 10/435 (2%)
Query: 23 CFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
++ G+W+A T +P + + TV + + ++A A W A +R
Sbjct: 15 AYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKER 74
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
++R+ D + L +L+ E GK L E GE+ ++ +++ G +P
Sbjct: 75 AAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLP 134
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXX 200
+ N ++ P+GV IT +NFP A++ AL G +V K
Sbjct: 135 TPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAM 194
Query: 201 XKLVSEVFERNKLPGAIFTSFCGGAE-IGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
L ER +P + + G + IG I +P + +SFTGST VG ++
Sbjct: 195 AFLA----ERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPT 250
Query: 260 FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319
K LEL GN AV + + GQ C R +HE +Y D+
Sbjct: 251 VKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADK 310
Query: 320 LVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFV 379
L ++K+G E G LGPL + K E I + ++G ++TGG F
Sbjct: 311 LAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFF 370
Query: 380 QPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
+PT++ + P D+ KEE F P+ + +F + EE V++ N GL++ +++R +
Sbjct: 371 EPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRV-- 428
Query: 439 WLGPHGSDTGIVNVN 453
W + G+V +N
Sbjct: 429 WRVAEALEYGMVGIN 443
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 202/442 (45%), Gaps = 18/442 (4%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
++ G+W+ + INP + I + A+ ED + ++A +A W +
Sbjct: 27 YIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGSTTGAQ 86
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R + +R I + EK L L S++ GK L E ++ +V ++ GL+ L+ +
Sbjct: 87 RAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYAGLAEALDSRRM 146
Query: 140 PSERPNHMMLETW---NPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXX 196
N +++ PLGVVG+IT +N+P + W AL G + K
Sbjct: 147 TPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASIT 206
Query: 197 XXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255
++ E+ LP G G E G +A P + +SFTGS G +
Sbjct: 207 CLELGEICREI----GLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTA 262
Query: 256 VHQRFGKCLLELSGNN-XXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
Q L L G + +A LF GQ C+ RL++ E+I
Sbjct: 263 AAQLVKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIAS 322
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE- 373
+D+L+ K +KI DPLE+ LGP+ + + K I N KS+G IL GG +
Sbjct: 323 AFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQH 382
Query: 374 -SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+G +VQPTI+ +++ + +I KEE+F PVL V F+T E+A+++ N GL +++ ++
Sbjct: 383 LKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSK 442
Query: 432 SPENIFKWLGPHGSDTGIVNVN 453
+ ++ TGI+ +N
Sbjct: 443 DVKRCERFT--KAFQTGIIWIN 462
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 196/414 (47%), Gaps = 17/414 (4%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
+VNG+WK + P + ++ +V S E+ + + +A W L +R
Sbjct: 8 YVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAY 67
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAV--GLSRQ---LNGSV 138
+ ++ D L +G +LS E+ K + EV ++ ++A GL + L G
Sbjct: 68 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 127
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXX 198
+ + + P+G+V I+ FN+P + G AL+ GN + +K
Sbjct: 128 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL 187
Query: 199 XXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
L++E F LP +F + G G+EIG I + ++ ++F+GST +G + +
Sbjct: 188 ----LLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAG 243
Query: 258 QRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
R +LEL G + +L ++++ A G +GQRCT +R+L+ ES+ ++
Sbjct: 244 MR--PIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 301
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN 377
+++ + + IG+P E + PL +S E I + +G LT I+ EGN
Sbjct: 302 EKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTE---IKREGN 357
Query: 378 FVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+ P + + ++ + EE F PVL +++ + EEA++I+N GL +SIFT
Sbjct: 358 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFT 411
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 182/417 (43%), Gaps = 12/417 (2%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W T ++NP + I V E ED ++ +KA A ++ W + A
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGS 137
RG ++ ++ D + +L L +++ GK + + ++ V+ + G + + +G
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXX 197
IP + + P+GV G I +NFP + W AL GN VV K
Sbjct: 143 TIPIDG-DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 198 XXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV- 256
L+ E PG + G G AIA + V+FTGST++G ++Q
Sbjct: 202 LYVANLIKEA---GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 258
Query: 257 HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ LEL G + AV FA GQ R + E IY
Sbjct: 259 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEF 318
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+++ V K +G+P + T GP K I K +G K+L GG + G
Sbjct: 319 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG 378
Query: 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
F+QPT+ ++ I KEE+F PV+ ++KF+T EE V N+ GL++++FT+
Sbjct: 379 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKD 435
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 185/416 (44%), Gaps = 15/416 (3%)
Query: 33 GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALR 92
G T S++P N+ + + + KA EA + W A +R + +I + +
Sbjct: 41 GETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIE 100
Query: 93 EKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQ-LNGSVIPSERPNHMMLET 151
+ L + ++ G++L +V + F + + P +R + +
Sbjct: 101 KHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDR-DWLYYTV 159
Query: 152 WNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERN 211
P G VG+IT +N P + W AL GN VV K ++E+ +
Sbjct: 160 RVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATK----LAEILKEA 215
Query: 212 KLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGN 270
LP +F G G E G A+ P + L++ TG T+ G +V + + EL G
Sbjct: 216 DLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGK 275
Query: 271 NXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330
+ + A+ +V+F G+RCT RLL+ E I++ + ++V+ + +++G
Sbjct: 276 SPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVG 335
Query: 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--------SEGNFVQPT 382
PL+ T +GPL PE + +E K +G ++L GG + S GN++ PT
Sbjct: 336 HPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPT 395
Query: 383 IVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
+ I +EE+F PVL + F+ EEA++ N GL++ +FTR E +
Sbjct: 396 VFVGENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHR 451
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 182/417 (43%), Gaps = 12/417 (2%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W T ++NP + I V E ED ++ +KA A ++ W + A
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGS 137
RG ++ ++ D + +L L +++ GK + + ++ V+ + G + + +G
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXX 197
IP + + P+GV G I +NFP + W AL GN VV K
Sbjct: 143 TIPIDG-DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 198 XXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV- 256
L+ E PG + G G AIA + V+FTGST++G ++Q
Sbjct: 202 LYVANLIKEA---GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 258
Query: 257 HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ LEL G + AV FA GQ R + E IY
Sbjct: 259 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEF 318
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+++ V K +G+P + T GP K I K +G K+L GG + G
Sbjct: 319 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG 378
Query: 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
F+QPT+ ++ I KEE+F PV+ ++KF+T EE V N+ GL++++FT+
Sbjct: 379 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKD 435
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 182/417 (43%), Gaps = 12/417 (2%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W T ++NP + I V E ED ++ +KA A ++ W + A
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGS 137
RG ++ ++ D + +L L +++ GK + + ++ V+ + G + + +G
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXX 197
IP + + P+GV G I +NFP + W AL GN VV K
Sbjct: 143 TIPIDG-DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 198 XXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV- 256
L+ E PG + G G AIA + V+FTGST++G ++Q
Sbjct: 202 LYVANLIKEA---GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 258
Query: 257 HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ LEL G + AV FA GQ R + E IY
Sbjct: 259 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQEDIYDEF 318
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+++ V K +G+P + T GP K I K +G K+L GG + G
Sbjct: 319 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG 378
Query: 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
F+QPT+ ++ I KEE+F PV+ ++KF+T EE V N+ GL++++FT+
Sbjct: 379 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKD 435
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 195/414 (47%), Gaps = 17/414 (4%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
+VNG+WK + P + ++ +V S E+ + + +A W L +R
Sbjct: 8 YVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAY 67
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAV--GLSRQ---LNGSV 138
+ ++ D L +G +LS E+ K + EV ++ ++A GL + L G
Sbjct: 68 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 127
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXX 198
+ + + P+G+V I+ FN+P + G AL+ GN + +K
Sbjct: 128 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL 187
Query: 199 XXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
L++E F LP +F + G G+EIG I + ++ ++FTGST +G + +
Sbjct: 188 ----LLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG 243
Query: 258 QRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
R +L L G + +L ++++ A G +GQRCT +R+L+ ES+ ++
Sbjct: 244 MR--PIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 301
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN 377
+++ + + IG+P E + PL +S E I + +G LT I+ EGN
Sbjct: 302 EKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTE---IKREGN 357
Query: 378 FVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+ P + + ++ + EE F PVL +++ + EEA++I+N GL +SIFT
Sbjct: 358 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFT 411
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 186/421 (44%), Gaps = 12/421 (2%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
F+ G++ T+ ++P + I + D E ++ A K W +L A R
Sbjct: 16 FIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQ 75
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
++R + +RE H L +L E GK+L EV D+ + + G ++PS
Sbjct: 76 NMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPS 135
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXX 201
+ + + P GVV ITA+NFP A+ G AL+ GN +V K
Sbjct: 136 DNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELG 195
Query: 202 KLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
++ E LP + G G+ +GQ + + P +++ TGST G + +T +
Sbjct: 196 RIAKEA----GLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYM 251
Query: 261 GKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
+LEL G A L+ GQ CT RL +H S+Y + +
Sbjct: 252 TPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKF 311
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE----G 376
+ + K +K+GDP++ + +GP N + + QG + TGG E G
Sbjct: 312 LPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGG 371
Query: 377 NFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435
+ +PT+ V++ +V EE F P+L ++K + E+A++ N GLS+ + T+S N
Sbjct: 372 CWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFAN 431
Query: 436 I 436
I
Sbjct: 432 I 432
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 183/418 (43%), Gaps = 14/418 (3%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W T ++NP I V E D + +KA A ++ W + A
Sbjct: 22 FINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRRMDAS 81
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGS 137
+RG ++ ++ D + +L L +++ GK + + ++ V+ + G + + +G
Sbjct: 82 ERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGK 141
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXX 197
IP + ++ P+GV G I +NFP + W AL GN VV K
Sbjct: 142 TIPIDG-DYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 200
Query: 198 XXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
L+ E P + G G G AIA + V+FTGST+VG ++Q
Sbjct: 201 LYVANLIKEA----GFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAA 256
Query: 257 -HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
+ LE+ G + AV FA GQ C R + E IY
Sbjct: 257 GKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAE 316
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375
+++ V K +G+P + T GP K I++ K +G K+L GG
Sbjct: 317 FVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAADR 376
Query: 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
G F+QPT+ ++ I KEE+F PV+ ++KF++ EE V N+ GL++++FT+
Sbjct: 377 GYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKD 434
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 197/436 (45%), Gaps = 13/436 (2%)
Query: 23 CFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
F+NGKW G T +NP + I T A+ + E+ +A K W + R
Sbjct: 9 SFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDR 68
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG-SVI 139
V+++ L E + +++ E G + + E+++ I + D A+ + +L G +
Sbjct: 69 KAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEV 128
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXX 199
PS+ PLGV+ I+ FNFP + + A+ GN VV K
Sbjct: 129 PSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHK---PDIQTAIS 185
Query: 200 XXKLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
++++ FE LP + EIG + +P L+SFTGST VG + + +
Sbjct: 186 GGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGR 245
Query: 259 RFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318
F + LEL GNN AV + +F GQ C R+++H+ +Y ++
Sbjct: 246 AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVE 305
Query: 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNF 378
+ KQ+ GD + T++GPL + + IE K+ G ++ G + GN
Sbjct: 306 KFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRV---GNV 362
Query: 379 VQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIF 437
+ P + V + I + ELFAP+ ++K + +EA+ + N GLSS++FT E
Sbjct: 363 LTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGE 422
Query: 438 KWLGPHGSDTGIVNVN 453
K+ D+G+ +VN
Sbjct: 423 KF--ALQIDSGMTHVN 436
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 195/414 (47%), Gaps = 17/414 (4%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
+VNG+WK + P + ++ +V S E+ + + +A W L +R
Sbjct: 8 YVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAY 67
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAV--GLSRQ---LNGSV 138
+ ++ D L +G +LS E+ K + EV ++ ++A GL + L G
Sbjct: 68 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 127
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXX 198
+ + + P+G+V I+ FN+P + G AL+ GN + +K
Sbjct: 128 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL 187
Query: 199 XXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
L++E F LP +F + G G+EIG I + ++ ++FTGST +G + +
Sbjct: 188 ----LLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG 243
Query: 258 QRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
R +LEL G + +L ++++ A G +GQR T +R+L+ ES+ ++
Sbjct: 244 MR--PIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADELV 301
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN 377
+++ + + IG+P E + PL +S E I + +G LT I+ EGN
Sbjct: 302 EKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTE---IKREGN 357
Query: 378 FVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+ P + + ++ + EE F PVL +++ + EEA++I+N GL +SIFT
Sbjct: 358 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFT 411
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 191/419 (45%), Gaps = 20/419 (4%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA---SKIWMELPAP 78
F+N +W+ G NP +++ V EA D ++ ++A A +W + A
Sbjct: 22 FINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMDAS 81
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGS 137
+RG ++ ++ D + L + S+ GK + ++Q VI + G + +++G
Sbjct: 82 ERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGM 141
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXX 197
IP + ++ P+GV G I +NFP + W AL CGN VV K
Sbjct: 142 TIPVDG-DYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSA 200
Query: 198 XXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
L+ E P + G G G AIA I ++FTGST+VG ++Q+
Sbjct: 201 LYMGALIKEA----GFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAA 256
Query: 257 -HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
+ LEL G + AV GQ CT R+ + ESIY+
Sbjct: 257 GRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEE 316
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS---QGGKILTGGSVI 372
+ + V+ K+ +G P + T GP +K + K +E I+S +G K+ GG +
Sbjct: 317 FVKRSVERAKRRIVGSPFDPTTEQGPQI---DKKQYNKILELIQSGVAEGAKLECGGKGL 373
Query: 373 ESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+G F++PT+ ++ I KEE+F PV +++F+T +E ++ N+ GL +++FT
Sbjct: 374 GRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFT 432
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 200/426 (46%), Gaps = 20/426 (4%)
Query: 23 CFVNGKWKAHGPTVSSINP-VNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++ G+W + S+NP ++ + T +A + E ++A +A K W + P R
Sbjct: 40 LYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRS 99
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF---AVGLSRQLNGSV 138
++ + +R + L L E+GK E +V E ID ++ A R V
Sbjct: 100 RLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEV 159
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXX 198
+P P + PLG VI +NFP A+ + GN V+ K
Sbjct: 160 VPY--PGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA 217
Query: 199 XXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV- 256
V E+F P + G G E+G + + PRI ++FTGS +VGL + +
Sbjct: 218 K----VFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAG 273
Query: 257 -----HQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHES 311
F + +E G + LA V+ +A G GQ+ + RL++ +
Sbjct: 274 RLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQG 333
Query: 312 IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV 371
Y+ VL++++ +++ +G P E+ LGP+ + E + IE K++G +++ GG
Sbjct: 334 AYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKR 391
Query: 372 IESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+E EG F+ PT+ E+ P A I +EE+F PVL V++ + F EA+++ N P GL+ +++
Sbjct: 392 LEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYS 451
Query: 431 RSPENI 436
R E++
Sbjct: 452 RKREHL 457
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 198/423 (46%), Gaps = 12/423 (2%)
Query: 24 FVNGKW--KAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAP 78
V+GK A G T+ ++P + + + T EAS +D + + A +A + W
Sbjct: 26 LVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRXSGA 85
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSV 138
+R + ++ D + + L + S+E+GK + + GE+ D+ +A G +R L G
Sbjct: 86 ERSRLXFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQT 145
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXX 198
+ + + L P+GVVG+IT +NFP + A+ G VV K
Sbjct: 146 HNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSI 205
Query: 199 XXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
+L E +P +F G G GQ +A+DP + V+FTGS +VG + +
Sbjct: 206 RLAELAREA----GIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAA 261
Query: 258 QRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
+ + LEL G A + + AGQ C + RLL+ E I +
Sbjct: 262 RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALX 321
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE-G 376
++L+D+ ++V GDPL + T +G + + + + G ++L GG I E G
Sbjct: 322 ERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAG 381
Query: 377 NFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435
+ PT+ ++P I +EE+F PVL + F+T +EAV + N+ GLS+S+++ + E
Sbjct: 382 LYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLET 441
Query: 436 IFK 438
+
Sbjct: 442 ALQ 444
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 186/414 (44%), Gaps = 10/414 (2%)
Query: 23 CFVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
C VNG+W A G T+ NP + I TV S+ +E + A ++A W A +R
Sbjct: 35 CLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKER 94
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
++R+ D + + +++ E GK L E GEV ++ ++++ G IP
Sbjct: 95 AGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIP 154
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXX 200
+ + + P+GV IT +NFP A++ A AL G ++ +
Sbjct: 155 APQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALAL 214
Query: 201 XKLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
L E+ +P + G A EIG + + + +SFTGST+VG ++
Sbjct: 215 GVLA----EKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPT 270
Query: 260 FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319
+ LEL GN AV + + AGQ C R+ + +Y ++
Sbjct: 271 IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEK 330
Query: 320 LVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFV 379
L K++K+G+ E G ++GP+ ++ + IE+ S+G K++TGG E G F
Sbjct: 331 LAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGK--ELGGLFF 388
Query: 380 QPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
+P I+ ++ + KEE F P+ + F T EE + N GL++ +T +
Sbjct: 389 EPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTEN 442
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 181/413 (43%), Gaps = 14/413 (3%)
Query: 28 KWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQI 87
K K T P + + +V E+ ++ +++ A W ++ +R V+ +
Sbjct: 30 KSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEA 89
Query: 88 GDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHM 147
+RE+ ++ +L I GK + E ++ ++ GL+ L+G I + P
Sbjct: 90 ARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHI--QLPGGA 147
Query: 148 MLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSE 206
T PLGV I A+N+P + W AL CGN VV+K +++E
Sbjct: 148 FAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV----ILAE 203
Query: 207 VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLE 266
+F +P + GGAE G + P ++ VSFTGS G V + + LE
Sbjct: 204 IFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLE 263
Query: 267 LSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ 326
L G + + AVR L A T GQ CT R+ + I L+++V K
Sbjct: 264 LGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKA 323
Query: 327 VKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE------SEGNFVQ 380
+ +GDPL T +G L + + K +G ++L GG + G F+
Sbjct: 324 IVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMS 383
Query: 381 PTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
P +++ VKEE+F PV+ V+ F T EE ++ N+ GL+S +FTR
Sbjct: 384 PCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRD 436
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 10/396 (2%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97
S+NP Q +A A+ ++ E + + K W +R + +R IG ALR
Sbjct: 11 SVNPATGQTLAAXPWANAQEIEHALSLAASGFKKWKXTSVAQRAQTLRDIGQALRAHAEE 70
Query: 98 LGRLLSIEMGKILPEGIGEVQEVIDMCD-FAVGLSRQLNGSVIPSERPNHMMLETWNPLG 156
+ ++ E GK + + EV + +CD +A LN P+ N + + PLG
Sbjct: 71 XAQCITREXGKPIKQARAEVTKSAALCDWYAEHGPAXLNPE--PTLVENQQAVIEYRPLG 128
Query: 157 VVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGA 216
V+ I +NFP + A L+ GN + K ++++E P
Sbjct: 129 VILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEA----GTPAG 184
Query: 217 IFTSFCGGAE-IGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXX 275
++ E + Q I DPRI+ V+ TGS + G + KC+LEL G++
Sbjct: 185 VYGWVNANNEGVSQXI-NDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV 243
Query: 276 XXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEK 335
+LAV++ + GQ C +R ++ E I Q D+ V +K GDPL +
Sbjct: 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVE 303
Query: 336 GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVK 394
LGP + R + ++ ++G ++L GG I EGN+ T++ +++P +
Sbjct: 304 ENDLGPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDXTAFR 363
Query: 395 EELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+ELF PV + + A+ + N GLS++IFT
Sbjct: 364 QELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 197/435 (45%), Gaps = 26/435 (5%)
Query: 11 LSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK 70
+ E G P P ++ G+W G + +P++ IA V+ S E+ E + + +
Sbjct: 10 IKEKGGVPVYP-SYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGR 68
Query: 71 IW--MELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAV 128
W ++P +R V+R+ D + L +L + GK +GEV+ +D A
Sbjct: 69 -WSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAE 127
Query: 129 GLSRQLNGSVIPSERPNHMMLET-----WNPLGVVGVITAFNFPCAVLGWNACIALVCGN 183
+++ G IP + + LET PLGVV IT FN+P + + GN
Sbjct: 128 LDLKKIGGDYIPGDW-TYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGN 186
Query: 184 CVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFT 243
VV K K + + P AI G E + I D R++ VSFT
Sbjct: 187 AVVVKPSISDPLPAAMAVK---ALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSFT 242
Query: 244 GSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTC 303
GST+VG V + + + ++EL G + LA + AGQRC
Sbjct: 243 GSTEVGERVVKVGGVK--QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAI 300
Query: 304 RRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG 363
+ +L +Y +++++ +++GDP + +GPL +P + IE+ +GG
Sbjct: 301 KLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGG 360
Query: 364 KILTGGSVIESEGNFVQPTIVEISPTADIVKE------ELFAPVLYVMKFQTFEEAVKIN 417
++L GG + +VQPT+VE AD VK+ E+FAPV ++ + ++A+++
Sbjct: 361 RVLAGGRRLGP--TYVQPTLVEAP--ADRVKDMVLYKREVFAPVALAVEVKDLDQAIELA 416
Query: 418 NSVPQGLSSSIFTRS 432
N P GL +++F R
Sbjct: 417 NGRPYGLDAAVFGRD 431
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 184/415 (44%), Gaps = 14/415 (3%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
F++G + G SI P + IA + A+ E + + A K W + RG
Sbjct: 18 FIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARG 77
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLS-RQLNGSVI 139
++++ D +RE+ L L +++ GK + E I + D +F G++ LNG I
Sbjct: 78 RILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGDYI 137
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXX 199
P PLGV I A+N+P + W A ALV GN +V+K
Sbjct: 138 P--LGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALK 195
Query: 200 XXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
++E+ LP +F G + G + P ++ VS TGS G V
Sbjct: 196 ----IAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGH 251
Query: 260 FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319
+EL G + + AV + ++GQ C+ R+ + + L+
Sbjct: 252 LKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLEN 311
Query: 320 LVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV---IESEG 376
L + + +GDPL+ T LGPL + ++ IE K++G ++TGG + + EG
Sbjct: 312 LKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEG 371
Query: 377 NFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+VQPT+ +++ I +EE+F PV+ V+ F +E + N+ GL+ +FT
Sbjct: 372 AYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFT 426
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 198/435 (45%), Gaps = 26/435 (5%)
Query: 11 LSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK 70
+ E G P P ++ G+W G + +P++ IA V+ S E+ E + + +
Sbjct: 10 IKEKGGVPVYP-SYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGR 68
Query: 71 IW--MELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAV 128
W ++P +R V+R+ D + L +L + GK +GEV+ +D A
Sbjct: 69 -WSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAE 127
Query: 129 GLSRQLNGSVIPSERPNHMMLET-----WNPLGVVGVITAFNFPCAVLGWNACIALVCGN 183
+++ G IP + + LET PLGVV IT FN+P + + GN
Sbjct: 128 LDLKKIGGDYIPGDW-TYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGN 186
Query: 184 CVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFT 243
VV K K + + P AI G E + +A D R++ VSFT
Sbjct: 187 AVVVKPSISDPLPAAMAVK---ALLDAGFPPDAIALLNLPGKEAEKIVADD-RVAAVSFT 242
Query: 244 GSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTC 303
GST+VG V + + + ++EL G + LA + AGQRC
Sbjct: 243 GSTEVGERVVKVGGVK--QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAI 300
Query: 304 RRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG 363
+ +L +Y +++++ +++GDP + +GPL +P + IE+ +GG
Sbjct: 301 KLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGG 360
Query: 364 KILTGGSVIESEGNFVQPTIVEISPTADIVKE------ELFAPVLYVMKFQTFEEAVKIN 417
++L GG + +VQPT+VE AD VK+ E+FAPV ++ + ++A+++
Sbjct: 361 RVLAGGRRLGP--TYVQPTLVEAP--ADRVKDMVLYKREVFAPVASAVEVKDLDQAIELA 416
Query: 418 NSVPQGLSSSIFTRS 432
N P GL +++F R
Sbjct: 417 NGRPYGLDAAVFGRD 431
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 196/435 (45%), Gaps = 26/435 (5%)
Query: 11 LSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK 70
+ E G P P ++ G+W G + +P++ IA V+ S E+ E + + +
Sbjct: 10 IKEKGGVPVYP-SYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGR 68
Query: 71 IW--MELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAV 128
W ++P +R V+R+ D + L +L + GK +GEV+ +D A
Sbjct: 69 -WSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAE 127
Query: 129 GLSRQLNGSVIPSERPNHMMLET-----WNPLGVVGVITAFNFPCAVLGWNACIALVCGN 183
+++ G IP + + LET PLGVV IT FN+P + + GN
Sbjct: 128 LDLKKIGGDYIPGDW-TYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGN 186
Query: 184 CVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFT 243
VV K K + + P AI G E + I D R++ VSFT
Sbjct: 187 AVVVKPSISDPLPAAMAVK---ALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSFT 242
Query: 244 GSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTC 303
GST+VG V + + + ++EL G + LA + AGQRC
Sbjct: 243 GSTEVGERVVKVGGVK--QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAI 300
Query: 304 RRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG 363
+ +L +Y +++++ +++GDP + +GPL +P + IE+ +GG
Sbjct: 301 KLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGG 360
Query: 364 KILTGGSVIESEGNFVQPTIVEISPTADIVKE------ELFAPVLYVMKFQTFEEAVKIN 417
++L GG + +VQPT VE AD VK+ E+FAPV ++ + ++A+++
Sbjct: 361 RVLAGGRRLGP--TYVQPTFVEAP--ADRVKDMVLYKREVFAPVALAVEVKDLDQAIELA 416
Query: 418 NSVPQGLSSSIFTRS 432
N P GL +++F R
Sbjct: 417 NGRPYGLDAAVFGRD 431
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 170/396 (42%), Gaps = 7/396 (1%)
Query: 40 NPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99
NP + + EAS E + ++A A W + R E + ++ D + E
Sbjct: 44 NPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFA 103
Query: 100 RLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVV 158
L S GK L E+ ++D+ F G +R LNG H + +PLGVV
Sbjct: 104 ELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVV 163
Query: 159 GVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIF 218
I +N+P + W AL GNCVV K +L ++F G +
Sbjct: 164 ASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFP----AGVVN 219
Query: 219 TSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXX 278
F G +G + P++ +VS TGS G + + +EL G
Sbjct: 220 ILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDD 279
Query: 279 XXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTL 338
+ V V AGQ CT R+ + IY T++++L +K G P ++ T
Sbjct: 280 ADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTE 339
Query: 339 LGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESEGNFVQPTIVEISPTAD-IVKEE 396
LGPL + + K +E K+ G K++TGG + G + PT++ + D IV++E
Sbjct: 340 LGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKE 399
Query: 397 LFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
+F PV+ V F E+ V N GL+SS++T+
Sbjct: 400 VFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKD 435
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 198/423 (46%), Gaps = 19/423 (4%)
Query: 24 FVNGKW-KAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
F+ G++ A G T ++INP + I V A + D ++ + A EA + +W ++ A
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSV 138
RG ++ ++ D + + L + +++ G + + V I + G ++ G+
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 139 IP--SERPN-HMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXX 195
IP RPN ++ L P+GV G++ +N+P +L W L GN VV K
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 196 XXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
+E+ + +P + G G+ +GQ ++ P + + FTGST+VG + +
Sbjct: 220 TALK----FAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMK 275
Query: 255 TVH-QRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+ K LEL G + AV+ + + G+ C RL + ESI+
Sbjct: 276 SCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIH 335
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPL-HTPESRKNFEKGIENIKSQGGKILTGGSVI 372
+ ++V+ +++KIG+PLE+ T GP H RK E +K +G ++ GG+ +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVK-EGATLVCGGNQV 394
Query: 373 ESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQ--TFEEAVKINNSVPQGLSSSIF 429
G F QPT+ ++ I KEE F P++ + +F + + N+ GL+S +F
Sbjct: 395 PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVF 454
Query: 430 TRS 432
TR
Sbjct: 455 TRD 457
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 198/423 (46%), Gaps = 19/423 (4%)
Query: 24 FVNGKW-KAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
F+ G++ A G T ++INP + I V A + D ++ + A EA + +W ++ A
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSV 138
RG ++ ++ D + + L + +++ G + + V I + G ++ G+
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 139 IP--SERPN-HMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXX 195
IP RPN ++ L P+GV G++ +N+P +L W L GN VV K
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 196 XXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
+E+ + +P + G G+ +GQ ++ P + + FTGST+VG + +
Sbjct: 220 TALK----FAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMK 275
Query: 255 TVH-QRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+ K L+L G + AV+ + + G+ C RL + ESI+
Sbjct: 276 SCALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIH 335
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPL-HTPESRKNFEKGIENIKSQGGKILTGGSVI 372
+ ++V+ +++KIG+PLE+ T GP H RK E +K +G ++ GG+ +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVK-EGATLVCGGNQV 394
Query: 373 ESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQ--TFEEAVKINNSVPQGLSSSIF 429
G F QPT+ ++ I KEE F P++ + +F + + N+ GL+S +F
Sbjct: 395 PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVF 454
Query: 430 TRS 432
TR
Sbjct: 455 TRD 457
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 197/423 (46%), Gaps = 19/423 (4%)
Query: 24 FVNGKW-KAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
F+ G++ A G T ++INP + I V A + D ++ + A EA + +W ++ A
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSV 138
RG ++ ++ D + + L + +++ G + + V I + G ++ G+
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 139 IP--SERPN-HMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXX 195
IP RPN ++ L P+GV G++ +N+P +L W L GN VV K
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 196 XXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
+E+ + +P + G G+ +GQ ++ P + + FTGST+VG + +
Sbjct: 220 TALK----FAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMK 275
Query: 255 TVH-QRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+ K L L G + AV+ + + G+ C RL + ESI+
Sbjct: 276 SCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIH 335
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPL-HTPESRKNFEKGIENIKSQGGKILTGGSVI 372
+ ++V+ +++KIG+PLE+ T GP H RK E +K +G ++ GG+ +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVK-EGATLVCGGNQV 394
Query: 373 ESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQ--TFEEAVKINNSVPQGLSSSIF 429
G F QPT+ ++ I KEE F P++ + +F + + N+ GL+S +F
Sbjct: 395 PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVF 454
Query: 430 TRS 432
TR
Sbjct: 455 TRD 457
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 205/448 (45%), Gaps = 27/448 (6%)
Query: 24 FVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
++ G+W A G T+ S++PV + + A + + A EA W P +R E
Sbjct: 9 YIAGQWLAGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIE 68
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE 142
++ + L+ + L R++ E GK L E EV ++ +V R+ G E
Sbjct: 69 LLERFAATLKSRADELARVIGEETGKPLWESATEVTSXVNKVAISVQAFRERTG-----E 123
Query: 143 RPNHMMLET----WNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXX 198
+ + T P GVV V +NFP + + AL+ GNCVV+K
Sbjct: 124 KSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFK----PSELTP 179
Query: 199 XXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
+L + + + LP + GG E G A+A + + FTGS++ G ++ H
Sbjct: 180 KVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLL----HS 235
Query: 259 RFG----KCL-LELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+FG K L LE GNN AV +++ +A +AGQRCT RRLL+ + +
Sbjct: 236 QFGGQPQKILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAW 295
Query: 314 -QTVLDQLVDVYKQVKIGDPLEK-GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV 371
+L +LV V +++G E+ G + + + ++ K E++ +G + L +
Sbjct: 296 GDALLARLVAVSATLRVGRFDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQ 355
Query: 372 IESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+ P I+++S A+ EE F P+L V+++ F A++ N+ GL++ + +
Sbjct: 356 PIDGAALLTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSD 415
Query: 432 SPENIFKWLGPHGSDTGIVNVNIPTNGA 459
S E ++L S GIVN N GA
Sbjct: 416 SRERFEQFLVE--SRAGIVNWNKQLTGA 441
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 198/433 (45%), Gaps = 6/433 (1%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
FV G+W T +P + + V + + + ++A EA W E+ A +R +
Sbjct: 16 FVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSL 75
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER 143
+R+ + + + L R+++ E GK L E GE+ ++ +R++ G +I +
Sbjct: 76 LRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPA 135
Query: 144 PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKL 203
+ L P+GV VIT +NFP A++ AL G VV K +L
Sbjct: 136 KDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAEL 195
Query: 204 VSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263
S+ + + I S E+G+AI DP +S +SFTGST G ++ +
Sbjct: 196 ASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRV 255
Query: 264 LLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323
+EL G AV + + GQ C + L+ I+ + +
Sbjct: 256 SMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEA 315
Query: 324 YKQ-VKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPT 382
K+ +++G+ E+GT GPL ++ + EK + + S+G ++TGG + NF +PT
Sbjct: 316 MKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPT 375
Query: 383 IVEISPTADIV--KEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440
++ + T D++ EE F P+ V+KF T EEA+ I N+ GL+ +++ P I W
Sbjct: 376 LL-CNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI--WR 432
Query: 441 GPHGSDTGIVNVN 453
+ G+V VN
Sbjct: 433 VAEQLEVGMVGVN 445
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 197/423 (46%), Gaps = 19/423 (4%)
Query: 24 FVNGKW-KAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
F+ G++ A G T ++INP + I V A + D ++ + A EA + +W ++ A
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSV 138
RG ++ ++ D + + L + +++ G + + V I + G ++ G+
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 139 IP--SERPN-HMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXX 195
IP RPN ++ L P+GV G++ +N+P +L W L GN VV K
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 196 XXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
+E+ + +P + G G+ +GQ ++ P + + FTGST+VG + +
Sbjct: 220 TALK----FAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMK 275
Query: 255 TVH-QRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+ K LEL G + AV+ + + G+ RL + ESI+
Sbjct: 276 SCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIH 335
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPL-HTPESRKNFEKGIENIKSQGGKILTGGSVI 372
+ ++V+ +++KIG+PLE+ T GP H RK E +K +G ++ GG+ +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVK-EGATLVCGGNQV 394
Query: 373 ESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQ--TFEEAVKINNSVPQGLSSSIF 429
G F QPT+ ++ I KEE F P++ + +F + + N+ GL+S +F
Sbjct: 395 PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVF 454
Query: 430 TRS 432
TR
Sbjct: 455 TRD 457
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 197/423 (46%), Gaps = 19/423 (4%)
Query: 24 FVNGKW-KAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
F+ G++ A G T ++INP + I V A + D ++ + A EA + +W ++ A
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSV 138
RG ++ ++ D + + L + +++ G + + V I + G ++ G+
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 139 IP--SERPN-HMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXX 195
IP RPN ++ L P+GV G++ +N+P +L W L GN VV K
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 196 XXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
+E+ + +P + G G+ +GQ ++ P + + FTGST+VG + +
Sbjct: 220 TALK----FAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMK 275
Query: 255 TVH-QRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+ K LEL G + AV+ + + G+ RL + ESI+
Sbjct: 276 SCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIH 335
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPL-HTPESRKNFEKGIENIKSQGGKILTGGSVI 372
+ ++V+ +++KIG+PLE+ T GP H RK E +K +G ++ GG+ +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVK-EGATLVCGGNQV 394
Query: 373 ESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQ--TFEEAVKINNSVPQGLSSSIF 429
G F QPT+ ++ I KEE F P++ + +F + + N+ GL+S +F
Sbjct: 395 PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVF 454
Query: 430 TRS 432
TR
Sbjct: 455 TRD 457
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 184/395 (46%), Gaps = 12/395 (3%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97
S+NP N+ A+ + + +E + K W R E++ I +AL+E
Sbjct: 8 SVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDE 67
Query: 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQ-LNGSVIPSERPNHMMLETWNPLG 156
L + ++E GK+L E EV+ + +C++ + L + + S+ N L+ G
Sbjct: 68 LAKXXTLEXGKLLSESKEEVELCVSICNYYADHGPEXLKPTKLNSDLGNAYYLK--QSTG 125
Query: 157 VVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLP-G 215
V+ +NFP + + GN ++ K L +++ +R P G
Sbjct: 126 VIXACEPWNFPLYQVIRVFAPNFIVGNPILLK----HAHNVPGSAALTAKIIKRAGAPEG 181
Query: 216 AIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXX 275
++ + ++ IA DPRI V+ TGS + G V + + K EL GN+
Sbjct: 182 SLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAGKNLKKSTXELGGNDAFIV 240
Query: 276 XXXXXXKLAVRSVL-FAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334
++ +R+VL A GQ CT+ +R+++ +S Y VL +L +V+ +K GDPLE
Sbjct: 241 LDDADPQV-LRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299
Query: 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIV 393
T L P ++ ++++ E ++ G K+ I+S+G F +PTI+ +I+ +
Sbjct: 300 ADTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVF 359
Query: 394 KEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
+E+F P+ V + A+++ N GL SS+
Sbjct: 360 DKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSV 394
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 196/423 (46%), Gaps = 19/423 (4%)
Query: 24 FVNGKW-KAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
F+ G++ A G T ++INP + I V A + D ++ + A EA + +W ++ A
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSV 138
RG ++ ++ D + + L + +++ G + + V I + G ++ G+
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 139 IP--SERPN-HMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXX 195
IP RPN ++ L P+GV G++ +N+P +L W L GN VV K
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 196 XXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
+E+ + +P + G G+ +GQ ++ P + + FTGST+VG + +
Sbjct: 220 TALK----FAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMK 275
Query: 255 TVH-QRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+ K L L G + AV+ + + G+ RL + ESI+
Sbjct: 276 SCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIH 335
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPL-HTPESRKNFEKGIENIKSQGGKILTGGSVI 372
+ ++V+ +++KIG+PLE+ T GP H RK E +K +G ++ GG+ +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVK-EGATLVCGGNQV 394
Query: 373 ESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQ--TFEEAVKINNSVPQGLSSSIF 429
G F QPT+ ++ I KEE F P++ + +F + + N+ GL+S +F
Sbjct: 395 PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVF 454
Query: 430 TRS 432
TR
Sbjct: 455 TRD 457
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 202/439 (46%), Gaps = 19/439 (4%)
Query: 26 NGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
NG+W G +S P + + ++ S E+ + ++ +A KIW P +R ++
Sbjct: 17 NGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDL 76
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER 143
+ D L E+ +G L+ E+ K IGEV D+ + +LNG + ++
Sbjct: 77 LYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQ 136
Query: 144 -----PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXX 198
+ L PLGVV I+ FN+P + ALV GN VV+K
Sbjct: 137 FKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFK---PATQGSL 193
Query: 199 XXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
K+V + + G I G+ IG + + P I +++FTG T G + +
Sbjct: 194 SGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA-- 251
Query: 259 RFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318
+ +LEL G + KL ++ A +GQRCT +R+ + +S+ ++
Sbjct: 252 KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVA 311
Query: 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNF 378
+ ++ +Q+ +G P E + P+ +S + I++ G +L+G + +GN
Sbjct: 312 NIKELVEQLTVGSP-EDDADITPVIDEKSAAFIQGLIDDALENGATLLSGN---KRQGNL 367
Query: 379 VQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIF 437
+ PT++ +++P + EE F PVL +++ + EA+ ++N GL +SIFT+ +
Sbjct: 368 LSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAI 427
Query: 438 KWLGPHGSDTGIVNVNIPT 456
+G H + G V++N T
Sbjct: 428 N-IGKH-LEVGTVHINAKT 444
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 197/433 (45%), Gaps = 6/433 (1%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
FV G+W T +P + + V + + + ++A EA W E+ A +R +
Sbjct: 16 FVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSL 75
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER 143
+R+ + + + L R+++ E GK L E GE+ ++ +R++ G +I +
Sbjct: 76 LRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPA 135
Query: 144 PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKL 203
+ L P+GV VIT +NFP A++ AL G VV K +L
Sbjct: 136 KDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAEL 195
Query: 204 VSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263
S+ + + I S E+G+AI DP +S +SFTGST G ++ +
Sbjct: 196 ASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRV 255
Query: 264 LLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323
+EL G AV + + GQ + L+ I+ + +
Sbjct: 256 SMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIHDAFVKAFAEA 315
Query: 324 YKQ-VKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPT 382
K+ +++G+ E+GT GPL ++ + EK + + S+G ++TGG + NF +PT
Sbjct: 316 MKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPT 375
Query: 383 IVEISPTADIV--KEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440
++ + T D++ EE F P+ V+KF T EEA+ I N+ GL+ +++ P I W
Sbjct: 376 LL-CNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI--WR 432
Query: 441 GPHGSDTGIVNVN 453
+ G+V VN
Sbjct: 433 VAEQLEVGMVGVN 445
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 190/429 (44%), Gaps = 29/429 (6%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++NG+W T+ INP + I V + + D ++ ++A + + +R
Sbjct: 11 YINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQ 70
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
++ +I + + + ++ E+G P + E + V L+
Sbjct: 71 ALLDKIVKEYENRKDDIVQAITDELG--APLSLSERVHYQXGLNHFVAARDALDNYEFEE 128
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXX 201
R + ++++ +GV G+IT +NFP A G+ VV K
Sbjct: 129 RRGDDLVVK--EAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAV--- 183
Query: 202 KLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
+++E+F++ +P +F G GA +G +++ P++ SFTGS G + + + F
Sbjct: 184 -ILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAAKDF 242
Query: 261 GKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
K LEL G + K A ++ V GQ CT R+L+ I L +L
Sbjct: 243 KKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAEL 302
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFE-------KGIENIKSQGGKILTGGSVIE 373
+ + QV++G+P E GT +GP+ S+K F+ KGIE +G ++ GG
Sbjct: 303 KEQFSQVRVGNPREDGTQVGPII---SKKQFDQVQNYINKGIE----EGAELFYGGPGKP 355
Query: 374 ---SEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429
+G F +PTI + + I +EE+F PV V+ + +EA++I N GL+ +
Sbjct: 356 EGLEKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVI 415
Query: 430 TRSPENIFK 438
+ E + K
Sbjct: 416 GKDKETLHK 424
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 162/398 (40%), Gaps = 9/398 (2%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
+NP I + EAS + + A A W + +R + +I DA+ ++
Sbjct: 45 LNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEF 104
Query: 99 GRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGV 157
L ++ GK I E+ +ID F G R L+ P H +P+G+
Sbjct: 105 AALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSXIRRDPIGI 164
Query: 158 VGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAI 217
VG I +N+P W A+ GN VV+K +L++++ LP +
Sbjct: 165 VGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-----LPEGV 219
Query: 218 FTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXX 276
G G +G A+ P++ VS TG G V + + LEL G
Sbjct: 220 VNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVY 279
Query: 277 XXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336
+ V + AGQ CT R+ IY+ ++ L ++ +
Sbjct: 280 GDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTE 339
Query: 337 TLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESEGNFVQPTIVEISPTAD-IVK 394
+GPL + R +E Q +I TGG EG F QPT+V + D IV+
Sbjct: 340 NEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVR 399
Query: 395 EELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
E+F PV+ V +F ++AV N GL+SS++T+
Sbjct: 400 REVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKD 437
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 197/436 (45%), Gaps = 14/436 (3%)
Query: 24 FVNGKW-KAHGPTVSS-INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+ G+W + + +S+ INP ++ IA +AS+ D + +A +A W PA +R
Sbjct: 16 LIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERS 75
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
++ + + L E + L E G + E+ ++ + +++G + PS
Sbjct: 76 AIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGRISPS 135
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXX 201
P GVVGVI+ +NFP + + AL GN VV K
Sbjct: 136 NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGV-- 193
Query: 202 KLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ-- 258
+ + +FE +P + ++ G G+EIG L+SFTGST VG V +
Sbjct: 194 -IPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGG 252
Query: 259 RFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318
LEL GN A ++ A GQ C + R+++ +++ L+
Sbjct: 253 PMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLE 312
Query: 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNF 378
+ V+ K + GDP +GTL+GP+ ++ IE K +G + G + EG
Sbjct: 313 KFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRL 369
Query: 379 VQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIF 437
V P + +++ +I +EE+F P++ V+K A ++ N+ GLS++++++ +
Sbjct: 370 VHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAA 429
Query: 438 KWLGPHGSDTGIVNVN 453
++ D+G+V++N
Sbjct: 430 QFA--LQIDSGMVHIN 443
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 165/374 (44%), Gaps = 20/374 (5%)
Query: 72 WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLS 131
W PA R + Q L + H LL E GK L + + E++E D C +
Sbjct: 566 WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQG 625
Query: 132 RQLNGSVI----PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVW 187
R+L GS P+ N + T GV I+ +NFP A+ AL+ GN VV
Sbjct: 626 RKLFGSETAMPGPTGESNAL---TMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVA 682
Query: 188 KGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTK 247
K L+ E +P + G IG A+ P I+ V FTGST+
Sbjct: 683 KPAEQTPRIAREAVALLHEA----GIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTE 738
Query: 248 VGLMVQQTVHQRFGK---CLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCR 304
V + + + + G + E G N + V+ +A +AGQRC+ R
Sbjct: 739 VARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALR 798
Query: 305 RLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGK 364
L + E + +++ + +++KIGDP + T +GP+ E+++ + I +K++
Sbjct: 799 LLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL 858
Query: 365 ILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKF--QTFEEAVKINNSVPQ 422
G + EG FV P I E++ + EE+F P+L+V+++ + E ++
Sbjct: 859 HFAGPA---PEGCFVAPHIFELTEAGQLT-EEVFGPILHVVRYRPENLERVLRAIERTGY 914
Query: 423 GLSSSIFTRSPENI 436
GL+ + +R ++I
Sbjct: 915 GLTLGVHSRIDDSI 928
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 163/365 (44%), Gaps = 13/365 (3%)
Query: 72 WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQE---VIDMCDFAV 128
W P +R V+ L E+ +LL+ E G+ P I E + ++
Sbjct: 64 WPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQ--PPTIIETMHWMGSMGAMNYFA 121
Query: 129 GLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 188
G + ++ + + ++ P+GVVG I A+N P + AL+ G +V K
Sbjct: 122 GAADKVTWTETRTGSYGQSIVSR-EPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLK 180
Query: 189 GXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKV 248
++EVF LP + + GG E GQA+ +P I + +FTGS+ V
Sbjct: 181 ----PAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAV 236
Query: 249 GLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLI 308
G V + + C LEL G + A+ ++F+ V AGQ C R+L
Sbjct: 237 GREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILA 296
Query: 309 HESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTG 368
S Y ++ + + + +G P + +GPL + + R E I +G +++ G
Sbjct: 297 PRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCG 356
Query: 369 GSVIE--SEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
G E G F+QPT+ ++ I +EE+F PVL ++ + T E+A+ I N GL+
Sbjct: 357 GGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLA 416
Query: 426 SSIFT 430
S++T
Sbjct: 417 GSVWT 421
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 186/426 (43%), Gaps = 40/426 (9%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++NG W + + I+P + A + S D ++ + A +A + W +R
Sbjct: 29 YINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERL 88
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMC---DFAVGLSRQLNGSV 138
V +I + ++ + + +S+EMG IDM A G S N
Sbjct: 89 GFVEKILEIYEKRSSDMAKTISMEMGA-----------PIDMALNAQTATGSSHIRNFIK 137
Query: 139 IPSE--------RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGX 190
E N + ++ +GVVG+IT +N+P + AL+ G +V K
Sbjct: 138 AYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLK-- 195
Query: 191 XXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG 249
L +E+ + LP +F G GA +G ++ P + ++SFTGST+ G
Sbjct: 196 --PSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAG 253
Query: 250 LMVQQTVHQRFGKCLLELSG---NNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRL 306
+ + + LEL G N + VR + +GQ C R+
Sbjct: 254 KDISKNASNTLKRVCLELGGKGANIIFADADIDALQRGVRHCFY----NSGQSCNAPTRM 309
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
L+ ++IY + D+ ++ ++G + G +GP+ + E + I++ +G ++
Sbjct: 310 LVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLV 369
Query: 367 TGGSVIE---SEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422
TGG+ + G +V+PT+ ++ P I +EE+F PVL ++ F T +EAV + N
Sbjct: 370 TGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEY 429
Query: 423 GLSSSI 428
GL++ I
Sbjct: 430 GLTNYI 435
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 171/416 (41%), Gaps = 9/416 (2%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++ G+WK A G T NP IA V ED ++A A ++ P R
Sbjct: 15 YIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIETRR 74
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
+ + I D L+E +GR+L E GK E GEV D+ L+ IP
Sbjct: 75 KWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPE 134
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXX 201
+ + + P+GV G+I +NFP + AL G V K
Sbjct: 135 KPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLTXIA-- 192
Query: 202 KLVSEVFERNKLPGAIFTSFCGGAE-IGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
V ++ LP G A IG+ + + + +SFTGST+VG + ++
Sbjct: 193 --FFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTAEQV 250
Query: 261 GKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
K LEL GN + A +++ GQ C R+ +HE + +L
Sbjct: 251 KKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKL 310
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-SEGNFV 379
+ + +GD G +GPL + ++ +++ +G ++ G E +G F
Sbjct: 311 AERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFF 370
Query: 380 QPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
PT+V+ + +EE F P++ F+T EE + N GL+S +FT E
Sbjct: 371 PPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTADAE 426
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 182/442 (41%), Gaps = 14/442 (3%)
Query: 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
G F++GK A G + NP + TV AS D +++ A W +
Sbjct: 28 GHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQR 87
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R V + L + + L LS E GK + + G++ +++C+F +G+
Sbjct: 88 RARVFXKFVQLLNDNXNELAEXLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFT 147
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXX 199
P P+G+ IT FNFP + W A+ CGN + K
Sbjct: 148 EGAGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIR 207
Query: 200 XXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
+L E LP I G AI P I+ VSF GST + V T
Sbjct: 208 LAELXIEA----GLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXN 263
Query: 260 FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLL-IHESIYQTVLD 318
+ N A +++ A G+AG+RC + + E ++D
Sbjct: 264 GKRAQCFGGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLID 323
Query: 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----S 374
+LV + ++IG ++ GP+ T E+ + I++ QG K++ G +
Sbjct: 324 KLVPXVESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYE 383
Query: 375 EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
G+F+ + +++P DI K E+F PVL V++ + +EEA+ + G +I+TR
Sbjct: 384 NGHFIGGCLFDDVTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDG 443
Query: 434 ENIFKWLGPHGSDTGIVNVNIP 455
+ + + G V VN+P
Sbjct: 444 DAARDFA--SRINIGXVGVNVP 463
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 174/414 (42%), Gaps = 29/414 (7%)
Query: 39 INPVNN-QKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALR--EKL 95
++P N+ K+A A + A A K W P R +V + D L +
Sbjct: 82 LSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRA 141
Query: 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG----SVIPSERPNHMMLET 151
L + + + ++ I E+ID F + +L G SV PS NH +
Sbjct: 142 EVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPST--NHTVYRG 199
Query: 152 WNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERN 211
G V I+ FNF A+ G A + GN V+WK +++ E
Sbjct: 200 LE--GFVAAISPFNF-TAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA---- 252
Query: 212 KLPGAIFTSF-CGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKCL 264
LP I G G + + ++FTGS + + V Q F +
Sbjct: 253 GLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLA 312
Query: 265 LELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVY 324
E G N V L +A GQ+C+ C RL + +S++ + +L++ +
Sbjct: 313 GECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEH 372
Query: 325 KQVKIGDPLEK-GTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESEGNFVQPT 382
++K+GDP E GT + ++ +K +E+ +S IL GG ES G +V+P
Sbjct: 373 SRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPC 432
Query: 383 IVEI-SPTADIVKEELFAPVL--YVMKFQTFEEAVK-INNSVPQGLSSSIFTRS 432
I+E P I+KEE+F PVL YV + E +K ++++ GL+ ++F +
Sbjct: 433 IIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQD 486
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 179/417 (42%), Gaps = 31/417 (7%)
Query: 39 INPVNN-QKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALR--EKL 95
++P N+ K+A A + ++A A K W P R ++ + D L +
Sbjct: 85 VSPFNHGHKVAKFCYADKSLLNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRA 144
Query: 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG----SVIPSERPN-HMMLE 150
L + + + ++ I E+ID F + +L G SV PS + LE
Sbjct: 145 EILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLE 204
Query: 151 TWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFER 210
G V I+ FNF A+ G A + GN V+WK +++ E
Sbjct: 205 -----GFVAAISPFNF-TAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA--- 255
Query: 211 NKLPGAIFTSF-CGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKC 263
LP I G G + + ++FTGS + + V Q F +
Sbjct: 256 -GLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRL 314
Query: 264 LLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323
E G N + V L +A GQ+C+ C RL + S++ + +L++
Sbjct: 315 AGECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEE 374
Query: 324 YKQVKIGDPLEK-GTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESEGNFVQP 381
+ ++K+GDP E GT + +S +K +E+ +S IL GG +S G FV+P
Sbjct: 375 HSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEP 434
Query: 382 TIVEI-SPTADIVKEELFAPVL--YVMKFQTFEEAVK-INNSVPQGLSSSIFTRSPE 434
IVE P I+KEE+F PVL YV ++E ++ ++++ GL+ ++F++ +
Sbjct: 435 CIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKD 491
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 179/417 (42%), Gaps = 31/417 (7%)
Query: 39 INPVNN-QKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALR--EKL 95
++P N+ K+A A + ++A A K W P R ++ + D L +
Sbjct: 85 VSPFNHGHKVAKFCYADKSLLNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRA 144
Query: 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG----SVIPSERPN-HMMLE 150
L + + + ++ I E+ID F + +L G SV PS + LE
Sbjct: 145 EILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLE 204
Query: 151 TWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFER 210
G V I+ FNF A+ G A + GN V+WK +++ E
Sbjct: 205 -----GFVAAISPFNF-TAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA--- 255
Query: 211 NKLPGAIFTSF-CGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKC 263
LP I G G + + ++FTGS + + V Q F +
Sbjct: 256 -GLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRL 314
Query: 264 LLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323
E G N + V L +A GQ+C+ C RL + S++ + +L++
Sbjct: 315 AGECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEE 374
Query: 324 YKQVKIGDPLEK-GTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESEGNFVQP 381
+ ++K+GDP E GT + +S +K +E+ +S IL GG +S G FV+P
Sbjct: 375 HSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEP 434
Query: 382 TIVEI-SPTADIVKEELFAPVL--YVMKFQTFEEAVK-INNSVPQGLSSSIFTRSPE 434
IVE P I+KEE+F PVL YV ++E ++ ++++ GL+ ++F++ +
Sbjct: 435 CIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKD 491
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 179/417 (42%), Gaps = 31/417 (7%)
Query: 39 INPVNN-QKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALR--EKL 95
++P N+ K+A A + ++A A K W P R ++ + D L +
Sbjct: 85 VSPFNHGHKVAKFCYADKSLLNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRA 144
Query: 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG----SVIPSERPN-HMMLE 150
L + + + ++ I E+ID F + +L G SV PS + LE
Sbjct: 145 EILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLE 204
Query: 151 TWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFER 210
G V I+ FNF A+ G A + GN V+WK +++ E
Sbjct: 205 -----GFVAAISPFNF-TAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA--- 255
Query: 211 NKLPGAIFTSF-CGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKC 263
LP I G G + + ++FTGS + + V Q F +
Sbjct: 256 -GLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRL 314
Query: 264 LLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323
E G N + V L +A GQ+C+ C RL + S++ + +L++
Sbjct: 315 AGECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEE 374
Query: 324 YKQVKIGDPLEK-GTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESEGNFVQP 381
+ ++K+GDP E GT + +S +K +E+ +S IL GG +S G FV+P
Sbjct: 375 HSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEP 434
Query: 382 TIVEI-SPTADIVKEELFAPVL--YVMKFQTFEEAVK-INNSVPQGLSSSIFTRSPE 434
IVE P I+KEE+F PVL YV ++E ++ ++++ GL+ ++F++ +
Sbjct: 435 CIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKD 491
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 166/383 (43%), Gaps = 15/383 (3%)
Query: 63 KACSEASKI---WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQE 119
+ C+ A + W EL R ++Q A+ + L L + G+ L + E+
Sbjct: 32 QQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR-LSITVLEIDS 90
Query: 120 VIDMCDFAVGLSRQL-NGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178
+ D GL+ +L S + P + ++ P +VGVI+ +NFP + + A
Sbjct: 91 FLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSXIDTIPA 150
Query: 179 LVCGNCVVWKGXXXXXXXXXXXXKLVSEVFE-RNKLPGAIFTSFCGGAEIGQAIAKDPRI 237
L+ G VV K ++ V E R+ L IF GG E G + +
Sbjct: 151 LLAGCAVVVKPSEIAPRFVAPLLXALNTVPELRDVL---IFVE--GGGETGANLIN--YV 203
Query: 238 SLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAG 297
V FTGS G V +T +RF LEL G + +LA ++L+ AV G
Sbjct: 204 DFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTG 263
Query: 298 QRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN 357
Q C + R+ + ES ++ QL+ ++++ PL + +GP+ + I +
Sbjct: 264 QSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILD 323
Query: 358 IKSQGGKILTGGSVIESEGN-FVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVK 415
+G I GG V E G + +PT+ ++ + + EE F P+ V F EEAV
Sbjct: 324 AVEKGAVIHCGGKVEELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAVY 383
Query: 416 INNSVPQGLSSSIFTRSPENIFK 438
+ N GLS+++F S + K
Sbjct: 384 LANDTIYGLSAAVFAGSEDEALK 406
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 137/309 (44%), Gaps = 19/309 (6%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKL 213
PLGVV VI A+N+P + A+ GN V+ K L+ + ++N
Sbjct: 103 PLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQN-- 160
Query: 214 PGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXX 273
++ GG + K+ R + +TGST VG +V + LEL G +
Sbjct: 161 ---LYLVVKGGVPETTELLKE-RFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPC 216
Query: 274 XXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333
+A R + + +GQ C +L SI ++++L K G+
Sbjct: 217 YVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDA 275
Query: 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTI-VEISPTADI 392
++ G + + + I+N K+ GG+ +S ++ PTI V++ P + +
Sbjct: 276 KQSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGTWDQS-SRYIAPTILVDVDPQSPV 329
Query: 393 VKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGS-----DT 447
++EE+F PV+ ++ ++ EEA++ N + L+ +F+ + + I K + S +
Sbjct: 330 MQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTAND 389
Query: 448 GIVNVNIPT 456
IV++ +PT
Sbjct: 390 VIVHITVPT 398
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 133/289 (46%), Gaps = 14/289 (4%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKL 213
PLGVV VI +N+P + A+ GN VV K ++ + +++
Sbjct: 120 PLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLDKD-- 177
Query: 214 PGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXX 273
++ GG + K+ R + +TGST VG ++ + LEL G +
Sbjct: 178 ---LYPVINGGVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPC 233
Query: 274 XXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333
+A R + + +GQ C +L SI ++++L K+ G+
Sbjct: 234 YVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDA 292
Query: 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADI 392
+K G + S ++F++ + I +G K+ GG+ ++ ++ PTI+ ++ P + +
Sbjct: 293 KKSRDYGRII---SARHFQRVMGLI--EGQKVAYGGTG-DAATRYIAPTILTDVDPQSPV 346
Query: 393 VKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLG 441
++EE+F PVL ++ ++ EEA++ N + L+ +F+ + + I K +
Sbjct: 347 MQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIA 395
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 138/339 (40%), Gaps = 33/339 (9%)
Query: 110 LPEGIGEVQEVIDMC---------DFAVGLSRQLNGSVIPSERPNHMMLE------TWNP 154
L E +G+ ++V+D+ DFA+ L+ V P P+ ++ P
Sbjct: 74 LAEDLGKPKDVVDLAEIGAVLHEIDFALA---HLDEWVAPVSVPSPDIIAPSECYVVQEP 130
Query: 155 LGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLP 214
GV +I FN+P + A++ GN + K K+++E F +
Sbjct: 131 YGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYV- 189
Query: 215 GAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXX 274
GG + + P + FTGS VG +V Q + +LEL G
Sbjct: 190 ----AVIQGGRDENSHLLSLP-FDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLI 244
Query: 275 XXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334
V ++F +GQ C L +H S+ +L++LV+ +VK P
Sbjct: 245 VLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVKDALLERLVE---RVKTELPEI 301
Query: 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVK 394
T G L T + ++ + +++ G++L G S+ + + ++
Sbjct: 302 NST--GKLVT---ERQVQRLVSLLEATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMS 356
Query: 395 EELFAPVLYVMKFQTFEEAV-KINNSVPQGLSSSIFTRS 432
EELF P+L V++F + A+ ++N P+ L+ +F +
Sbjct: 357 EELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKD 395
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 137/339 (40%), Gaps = 33/339 (9%)
Query: 110 LPEGIGEVQEVIDMC---------DFAVGLSRQLNGSVIPSERPNHMMLE------TWNP 154
L E +G+ ++V+D+ DFA+ L+ V P P+ ++ P
Sbjct: 74 LAEDLGKPKDVVDLAEIGAVLHEIDFALA---HLDEWVAPVSVPSPDIIAPSECYVVQEP 130
Query: 155 LGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLP 214
GV +I FN+P + A++ GN + K K+++E F +
Sbjct: 131 YGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYV- 189
Query: 215 GAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXX 274
GG + + P + FTGS VG +V Q + +LEL G
Sbjct: 190 ----AVIQGGRDENSHLLSLP-FDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLI 244
Query: 275 XXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334
V ++F +GQ L +H S+ +L++LV+ +VK P
Sbjct: 245 VLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVE---RVKTELPEI 301
Query: 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVK 394
T G L T + ++ + +++ G++L G S+ + + ++
Sbjct: 302 NST--GKLVT---ERQVQRLVSLLEATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMS 356
Query: 395 EELFAPVLYVMKFQTFEEAV-KINNSVPQGLSSSIFTRS 432
EELF P+L V++F + A+ ++N P+ L+ +F +
Sbjct: 357 EELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKD 395
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 121/293 (41%), Gaps = 28/293 (9%)
Query: 156 GVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPG 215
GV I AFNFP L A AL+ G V+ K ++V++V + LP
Sbjct: 151 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVK---PATATAWLTQRMVADVVDAGILPP 207
Query: 216 AIFTSFCGGAE--IGQAIAKDPRISLVSFTGS--TKVGLMVQQTVHQRFGKCLLELSGNN 271
+ CG + + Q + D +VSFTGS T L QR + +E N
Sbjct: 208 GALSIICGSSAGLLDQIRSFD----VVSFTGSADTAATLRAHPAFVQRGARLNVEADSLN 263
Query: 272 XX-----XXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ 326
L ++ V+ +GQ+CT RR + E+ + VL+ L +
Sbjct: 264 SAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAK 323
Query: 327 VKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV--IESEGNF---VQP 381
+ +G+P +G L + E +N GI ++ + +V I+++ N V P
Sbjct: 324 ITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAP 383
Query: 382 T--IVEISPTADIVKE-ELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+V A ++ + E+F PV V ++ + N++P+ + ++ R
Sbjct: 384 HLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTD----TNALPEAHAVALARR 432
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 121/293 (41%), Gaps = 28/293 (9%)
Query: 156 GVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPG 215
GV I AFNFP L A AL+ G V+ K ++V++V + LP
Sbjct: 153 GVALFINAFNFPSWGLWAKAAPALLSGVPVIVK---PATATAWLTQRMVADVVDAGILPP 209
Query: 216 AIFTSFCGGAE--IGQAIAKDPRISLVSFTGS--TKVGLMVQQTVHQRFGKCLLELSGNN 271
+ CG + + Q + D +VSFTGS T L QR + +E N
Sbjct: 210 GALSIICGSSAGLLDQIRSFD----VVSFTGSADTAATLRAHPAFVQRGARLNVEADSLN 265
Query: 272 XX-----XXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ 326
L ++ V+ +GQ+CT RR + E+ + VL+ L +
Sbjct: 266 SAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAK 325
Query: 327 VKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV--IESEGNF---VQP 381
+ +G+P +G L + E +N GI ++ + +V I+++ N V P
Sbjct: 326 ITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAP 385
Query: 382 T--IVEISPTADIVKE-ELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+V A ++ + E+F PV V ++ + N++P+ + ++ R
Sbjct: 386 HLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTD----TNALPEAHAVALARR 434
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 121/293 (41%), Gaps = 28/293 (9%)
Query: 156 GVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPG 215
GV I AFNFP L A AL+ G V+ K ++V++V + LP
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVK---PATATAWLTQRMVADVVDAGILPP 209
Query: 216 AIFTSFCGGAE--IGQAIAKDPRISLVSFTGS--TKVGLMVQQTVHQRFGKCLLELSGNN 271
+ CG + + Q + D +VSFTGS T L QR + +E N
Sbjct: 210 GALSIICGSSAGLLDQIRSFD----VVSFTGSADTAATLRAHPAFVQRGARLNVEADSLN 265
Query: 272 XX-----XXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ 326
L ++ V+ +GQ+CT RR + E+ + VL+ L +
Sbjct: 266 SAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAK 325
Query: 327 VKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV--IESEGNF---VQP 381
+ +G+P +G L + E +N GI ++ + +V I+++ N V P
Sbjct: 326 ITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAP 385
Query: 382 T--IVEISPTADIVKE-ELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+V A ++ + E+F PV V ++ + N++P+ + ++ R
Sbjct: 386 HLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTD----TNALPEAHAVALARR 434
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 121/293 (41%), Gaps = 28/293 (9%)
Query: 156 GVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPG 215
GV I AFNFP L A AL+ G V+ K ++V++V + LP
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVK---PATATAWLTQRMVADVVDAGILPP 209
Query: 216 AIFTSFCGGAE--IGQAIAKDPRISLVSFTGS--TKVGLMVQQTVHQRFGKCLLELSGNN 271
+ CG + + Q + D +VSFTGS T L QR + ++ N
Sbjct: 210 GALSIICGSSAGLLDQIRSFD----VVSFTGSADTAATLRAHPAFVQRGARLNVQADSLN 265
Query: 272 XX-----XXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ 326
L ++ V+ +GQ+CT RR + E+ + VL+ L +
Sbjct: 266 SAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAK 325
Query: 327 VKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV--IESEGNF---VQP 381
+ +G+P +G L + E +N GI ++ + +V I+++ N V P
Sbjct: 326 ITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAP 385
Query: 382 T--IVEISPTADIVKE-ELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+V A ++ + E+F PV V ++ + N++P+ + ++ R
Sbjct: 386 HLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTD----TNALPEAHAVALARR 434
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 120/293 (40%), Gaps = 28/293 (9%)
Query: 156 GVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPG 215
GV I AFNFP L A AL+ G V+ K ++V++V + LP
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVK---PATATAWLTQRMVADVVDAGILPP 209
Query: 216 AIFTSFCGGAE--IGQAIAKDPRISLVSFTGS--TKVGLMVQQTVHQRFGKCLLELSGNN 271
+ CG + + Q + D +VSFTGS T L QR + +E N
Sbjct: 210 GALSIICGSSAGLLDQIRSFD----VVSFTGSADTAATLRAHPAFVQRGARLNVEADSLN 265
Query: 272 XX-----XXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ 326
L ++ V+ +GQ+ T RR + E+ + VL+ L +
Sbjct: 266 SAILCADATPDTPAFDLFIKEVVREMTVKSGQKATAIRRAFVPEAALEPVLEALKAKLAK 325
Query: 327 VKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV--IESEGNF---VQP 381
+ +G+P +G L + E +N GI ++ + +V I+++ N V P
Sbjct: 326 ITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAP 385
Query: 382 T--IVEISPTADIVKE-ELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+V A ++ + E+F PV V ++ + N++P+ + ++ R
Sbjct: 386 HLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTD----TNALPEAHAVALARR 434
>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi
Length = 510
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 78/202 (38%), Gaps = 31/202 (15%)
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG--IGEVQEVIDMCDFAVGLSRQLNG 136
KR ++R I L + + +E LPE GE+ + +L
Sbjct: 53 KRASLLRTIASELEARSDDIIARAHLETA--LPEVRLTGEIARTANQL--------RLFA 102
Query: 137 SVIPSERPNHMMLETWNP----------------LGVVGVITAFNFPCA--VLGWNACIA 178
V+ S + +L+T NP LG V V A NFP A G + A
Sbjct: 103 DVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASA 162
Query: 179 LVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAE-IGQAIAKDPRI 237
L G V+ KG + + + ++ +LP AIFT G +GQA+ P I
Sbjct: 163 LAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEI 222
Query: 238 SLVSFTGSTKVGLMVQQTVHQR 259
V FTGS G + H+R
Sbjct: 223 KAVGFTGSVGGGRALFNLAHER 244
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 94/243 (38%), Gaps = 25/243 (10%)
Query: 24 FVNGKWKAHGPTVSSI---NPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
V G+W T +S P ++ + TV E +A EA + +R
Sbjct: 33 LVAGEWLDGAGTFASAPAHGPAHDFAVGTV-----ELVNRACEAAEEAFWTYGYSSRKER 87
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEG---------IGEVQEVIDMCDFAVGLS 131
+R I D + + + + S E G LPE G+++ D + L
Sbjct: 88 AAFLRAIADEIEARAEAITEIGSQETG--LPEARLNGERGRTTGQLRLFADHIEKGDYLD 145
Query: 132 RQLNGSVIPSERP--NHMMLETWNPLGVVGVITAFNFPCA--VLGWNACIALVCGNCVVW 187
R+++ + P +P + P+G V V A NFP A G + AL G VV
Sbjct: 146 RRVD-AAXPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVV 204
Query: 188 KGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGST 246
KG + V + + +F+ GG+ ++G A+ + P I V FTGS
Sbjct: 205 KGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSL 264
Query: 247 KVG 249
G
Sbjct: 265 AGG 267
>pdb|3SAE|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
Prospective Target For Advanced Biofuels Production
pdb|3SDQ|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
Prospective Target For Advanced Biofuels Production
pdb|3SDR|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
Prospective Target For Advanced Biofuels Production
pdb|3SDT|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
Prospective Target For Advanced Biofuels Production
pdb|3SDU|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
Prospective Target For Advanced Biofuels Production
pdb|3SDV|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
Prospective Target For Advanced Biofuels Production
Length = 817
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Query: 225 AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLA 284
A I + + K P ++ F K+ + Q++HQ K + ++ +
Sbjct: 474 ARIAKCVYKLPYVNNEKFLELGKLDFNIIQSIHQEEMKNVTSWFRDSGLPLFTFARER-P 532
Query: 285 VRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVY 324
+ A GT + CR L + QTVLD + D Y
Sbjct: 533 LEFYFLVAAGTYEPQYAKCRFLFTKVACLQTVLDDMYDTY 572
>pdb|1O20|A Chain A, Crystal Structure Of Gamma-glutamyl Phosphate Reductase
(tm0293) From Thermotoga Maritima At 2.00 A Resolution
Length = 427
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 106/284 (37%), Gaps = 25/284 (8%)
Query: 60 EGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGE--- 116
E K EA + ++ + +++I + L E+ + I++ K G+ E
Sbjct: 18 EKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLV 77
Query: 117 ---------VQEVIDMCDFAVGLSRQLNGSVIPS-ERPNHMMLETWN-PLGVVGVITAFN 165
+ E I C+ +GL + G VI S R + + + P+G +G+I +
Sbjct: 78 DRLALNDKRIDEXIKACETVIGLKDPV-GEVIDSWVREDGLRIARVRVPIGPIGII--YE 134
Query: 166 FPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAI--FTSFCG 223
V +AL GN ++ +G + E + ++P + F
Sbjct: 135 SRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTD 194
Query: 224 GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS-GNNXXXXXXXXXXK 282
+ + + I +SLV G G + V +LE GN K
Sbjct: 195 RSLVLEXIRLREYLSLVIPRG----GYGLISFVRDNATVPVLETGVGNCHIFVDESADLK 250
Query: 283 LAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ 326
AV ++ A G C +LL+HE I + L +V+ ++
Sbjct: 251 KAVPVIINAKTQRPGT-CNAAEKLLVHEKIAKEFLPVIVEELRK 293
>pdb|3U9M|A Chain A, Structure Of Reduced Human Fbxl5 Hemerythrin Like Domain
pdb|3U9M|C Chain C, Structure Of Reduced Human Fbxl5 Hemerythrin Like Domain
pdb|3U9M|E Chain E, Structure Of Reduced Human Fbxl5 Hemerythrin Like Domain
pdb|3U9M|G Chain G, Structure Of Reduced Human Fbxl5 Hemerythrin Like Domain
Length = 160
Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 21/122 (17%)
Query: 313 YQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHT--------------PESRKNFEKGIENI 358
++ +L L +K+ K+ + +E ++G L E FEKG++N+
Sbjct: 40 FRALLQSLYATFKEFKMHEQIENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNV 99
Query: 359 KSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINN 418
K++ ++ + E F + + + +EE+F P+L M++ T+EE I
Sbjct: 100 KNEYEQLNYAKQLKERLEAFTRDFLPHMKE-----EEEVFQPML--MEYFTYEELKDIKK 152
Query: 419 SV 420
V
Sbjct: 153 KV 154
>pdb|3V5X|A Chain A, Structure Of Fbxl5 Hemerythrin Domain, C2 Cell
pdb|3V5X|B Chain B, Structure Of Fbxl5 Hemerythrin Domain, C2 Cell
pdb|3V5Y|A Chain A, Structure Of Fbxl5 Hemerythrin Domain, P2(1) Cell
pdb|3V5Y|B Chain B, Structure Of Fbxl5 Hemerythrin Domain, P2(1) Cell
pdb|3V5Y|C Chain C, Structure Of Fbxl5 Hemerythrin Domain, P2(1) Cell
pdb|3V5Y|D Chain D, Structure Of Fbxl5 Hemerythrin Domain, P2(1) Cell
pdb|3V5Z|A Chain A, Structure Of Fbxl5 Hemerythrin Domain, C2 Cell, Grown
Anaerobically
pdb|3V5Z|B Chain B, Structure Of Fbxl5 Hemerythrin Domain, C2 Cell, Grown
Anaerobically
Length = 161
Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 21/122 (17%)
Query: 313 YQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHT--------------PESRKNFEKGIENI 358
++ +L L +K+ K+ + +E ++G L E FEKG++N+
Sbjct: 40 FRALLQSLYATFKEFKMHEQIENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNV 99
Query: 359 KSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINN 418
K++ ++ + E F + + + +EE+F P+L M++ T+EE I
Sbjct: 100 KNEYEQLNYAKQLKERLEAFTRDFLPHMKE-----EEEVFQPML--MEYFTYEELKDIKK 152
Query: 419 SV 420
V
Sbjct: 153 KV 154
>pdb|3D7A|A Chain A, Crystal Structure Of Duf54 Family Protein Ph1010 From
Hyperthermophilic Archaea Pyrococcus Horikoshii Ot3
pdb|3D7A|B Chain B, Crystal Structure Of Duf54 Family Protein Ph1010 From
Hyperthermophilic Archaea Pyrococcus Horikoshii Ot3
Length = 138
Score = 30.4 bits (67), Expect = 2.2, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 19/87 (21%)
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
+G +IL ++ EG F + I+++ V YV K V N
Sbjct: 65 RGQQILDTARMMLEEGYFGEEIIIKVHKQ-----------VAYVGK-------VNFNEDS 106
Query: 421 PQG-LSSSIFTRSPENIFKWLGPHGSD 446
P G ++ +I T+ P+ + KWL P D
Sbjct: 107 PLGPITITIRTKEPQKLMKWLAPRTKD 133
>pdb|3L4T|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Bj2661
pdb|3L4U|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With De-O-Sulfonated Kotalanol
pdb|3L4V|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Kotalanol
pdb|3L4W|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Miglitol
pdb|3L4X|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Nr4-8
pdb|3L4Y|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Nr4-8ii
pdb|3L4Z|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Salacinol
Length = 875
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 35/155 (22%)
Query: 26 NGKWKAH-----GPTVSSINPVNNQK----IATVVEASLEDYEEGMKACSEASKIWMELP 76
N W H GP + I PV ++ +A V +A DYE G + K+ MELP
Sbjct: 663 NSTWDVHQQFLWGPGLL-ITPVLDEGAEKVMAYVPDAVWYDYETGSQVRWRKQKVEMELP 721
Query: 77 APKRGEVVR---------QIGDALREKLHHLGRLLSIEMGKILPEGIGEV---------- 117
K G +R L + + LG +++++ K E GE+
Sbjct: 722 GDKIGLHLRGGYIFPTQQPNTTTLASRKNPLGLIIALDENK---EAKGELFWDDGETKDT 778
Query: 118 --QEVIDMCDFAVGLSR-QLNGSVIPSERPNHMML 149
+V +C+F+V +R ++N S + PN++
Sbjct: 779 VANKVYLLCEFSVTQNRLEVNISQSTYKDPNNLAF 813
>pdb|2QLY|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|2QMJ|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
pdb|3CTT|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Casuarine
Length = 870
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 35/155 (22%)
Query: 26 NGKWKAH-----GPTVSSINPVNNQK----IATVVEASLEDYEEGMKACSEASKIWMELP 76
N W H GP + I PV ++ +A V +A DYE G + K+ MELP
Sbjct: 663 NSTWDVHQQFLWGPGLL-ITPVLDEGAEKVMAYVPDAVWYDYETGSQVRWRKQKVEMELP 721
Query: 77 APKRGEVVR---------QIGDALREKLHHLGRLLSIEMGKILPEGIGEV---------- 117
K G +R L + + LG +++++ K E GE+
Sbjct: 722 GDKIGLHLRGGYIFPTQQPNTTTLASRKNPLGLIIALDENK---EAKGELFWDDGETKDT 778
Query: 118 --QEVIDMCDFAVGLSR-QLNGSVIPSERPNHMML 149
+V +C+F+V +R ++N S + PN++
Sbjct: 779 VANKVYLLCEFSVTQNRLEVNISQSTYKDPNNLAF 813
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,475,264
Number of Sequences: 62578
Number of extensions: 561106
Number of successful extensions: 1579
Number of sequences better than 100.0: 101
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1198
Number of HSP's gapped (non-prelim): 102
length of query: 508
length of database: 14,973,337
effective HSP length: 103
effective length of query: 405
effective length of database: 8,527,803
effective search space: 3453760215
effective search space used: 3453760215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)