Query 010520
Match_columns 508
No_of_seqs 244 out of 1857
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 08:34:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010520.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010520hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 1E-107 4E-112 857.7 54.5 470 20-497 6-485 (490)
2 2j6l_A Aldehyde dehydrogenase 100.0 7E-105 2E-109 842.1 56.6 491 4-495 8-499 (500)
3 3ifg_A Succinate-semialdehyde 100.0 5E-104 2E-108 831.6 53.8 468 20-494 12-483 (484)
4 3ed6_A Betaine aldehyde dehydr 100.0 2E-103 6E-108 832.8 55.3 470 20-496 32-511 (520)
5 3ek1_A Aldehyde dehydrogenase; 100.0 1E-103 5E-108 830.8 53.4 467 21-496 33-503 (504)
6 4e4g_A Methylmalonate-semialde 100.0 1E-103 4E-108 834.8 51.5 483 10-498 16-508 (521)
7 3rh9_A Succinate-semialdehyde 100.0 3E-103 9E-108 829.0 53.8 470 19-496 10-485 (506)
8 4f3x_A Putative aldehyde dehyd 100.0 2E-103 6E-108 829.7 51.8 469 19-495 24-497 (498)
9 3pqa_A Lactaldehyde dehydrogen 100.0 5E-103 2E-107 823.6 54.5 467 23-500 2-469 (486)
10 3k2w_A Betaine-aldehyde dehydr 100.0 4E-103 1E-107 828.4 53.2 475 15-496 7-489 (497)
11 3u4j_A NAD-dependent aldehyde 100.0 1E-102 4E-107 828.2 55.3 475 19-500 21-503 (528)
12 3iwj_A Putative aminoaldehyde 100.0 2E-102 8E-107 823.6 55.7 474 16-496 3-490 (503)
13 2o2p_A Formyltetrahydrofolate 100.0 2E-102 6E-107 824.7 54.2 468 21-495 37-517 (517)
14 3prl_A NADP-dependent glyceral 100.0 2E-102 7E-107 822.6 54.7 471 19-501 10-489 (505)
15 2d4e_A 5-carboxymethyl-2-hydro 100.0 7E-102 2E-106 821.2 57.8 473 20-500 26-510 (515)
16 3jz4_A Succinate-semialdehyde 100.0 9E-102 3E-106 816.2 56.2 469 20-495 9-481 (481)
17 3qan_A 1-pyrroline-5-carboxyla 100.0 4E-102 2E-106 825.3 53.3 475 18-500 35-521 (538)
18 2imp_A Lactaldehyde dehydrogen 100.0 6E-102 2E-106 816.9 53.7 471 17-494 3-478 (479)
19 1bxs_A Aldehyde dehydrogenase; 100.0 1E-101 5E-106 815.8 55.9 470 19-496 19-497 (501)
20 1a4s_A ALDH, betaine aldehyde 100.0 7E-102 2E-106 819.3 52.0 469 19-496 18-497 (503)
21 3b4w_A Aldehyde dehydrogenase; 100.0 8E-102 3E-106 817.3 51.8 470 20-498 8-485 (495)
22 3i44_A Aldehyde dehydrogenase; 100.0 2E-101 6E-106 814.4 53.7 465 17-492 22-495 (497)
23 1o04_A Aldehyde dehydrogenase, 100.0 1E-101 4E-106 815.7 52.4 469 20-496 19-496 (500)
24 3r64_A NAD dependent benzaldeh 100.0 5E-101 2E-105 814.0 57.2 475 19-503 11-493 (508)
25 3r31_A BADH, betaine aldehyde 100.0 7E-102 2E-106 820.0 49.5 469 17-496 11-489 (517)
26 1wnd_A Putative betaine aldehy 100.0 3E-101 9E-106 812.4 53.3 466 21-495 24-495 (495)
27 2w8n_A Succinate-semialdehyde 100.0 2E-101 8E-106 812.6 51.6 476 12-495 4-486 (487)
28 4dng_A Uncharacterized aldehyd 100.0 8E-101 3E-105 810.2 53.1 471 18-497 4-480 (485)
29 1uxt_A Glyceraldehyde-3-phosph 100.0 4E-101 1E-105 812.6 50.9 478 11-500 10-497 (501)
30 2ve5_A BADH, betaine aldehyde 100.0 2E-100 7E-105 808.2 54.6 472 17-496 3-484 (490)
31 1euh_A NADP dependent non phos 100.0 2E-100 6E-105 805.0 52.4 465 18-495 2-474 (475)
32 1t90_A MMSDH, probable methylm 100.0 3E-100 9E-105 805.1 52.1 470 20-496 5-481 (486)
33 3ros_A NAD-dependent aldehyde 100.0 1E-100 4E-105 805.1 49.0 454 34-496 4-459 (484)
34 1uzb_A 1-pyrroline-5-carboxyla 100.0 6E-100 2E-104 807.3 54.7 469 19-495 36-516 (516)
35 3ty7_A Putative aldehyde dehyd 100.0 2.9E-99 1E-103 796.9 47.4 461 19-492 6-474 (478)
36 4e3x_A Delta-1-pyrroline-5-car 100.0 9E-99 3E-103 801.4 51.2 482 9-495 52-551 (563)
37 3etf_A Putative succinate-semi 100.0 3E-98 1E-102 786.5 52.4 455 32-494 5-460 (462)
38 3ju8_A Succinylglutamic semial 100.0 4.9E-97 2E-101 781.1 51.6 462 21-495 6-471 (490)
39 4h7n_A Aldehyde dehydrogenase; 100.0 4.1E-96 1E-100 771.6 50.9 460 32-500 4-469 (474)
40 4f9i_A Proline dehydrogenase/d 100.0 1E-95 3E-100 817.8 52.2 472 18-496 529-1011(1026)
41 2y53_A Aldehyde dehydrogenase 100.0 2.8E-94 9.6E-99 767.7 46.1 464 20-494 7-518 (534)
42 3lns_A Benzaldehyde dehydrogen 100.0 2.6E-93 8.9E-98 747.0 49.1 444 33-493 5-455 (457)
43 3v4c_A Aldehyde dehydrogenase 100.0 1.2E-92 4.1E-97 754.1 45.0 469 12-498 21-520 (528)
44 3sza_A Aldehyde dehydrogenase, 100.0 1.3E-91 4.5E-96 734.6 47.5 430 51-495 13-448 (469)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 2.2E-89 7.6E-94 726.1 46.8 444 32-491 5-479 (510)
46 3haz_A Proline dehydrogenase; 100.0 7.9E-87 2.7E-91 744.5 48.6 437 50-496 544-988 (1001)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 7.1E-83 2.4E-87 666.8 29.8 410 37-496 10-436 (463)
48 3k9d_A LMO1179 protein, aldehy 100.0 3.9E-82 1.3E-86 663.7 29.2 428 49-501 5-455 (464)
49 1vlu_A Gamma-glutamyl phosphat 100.0 2.6E-80 8.9E-85 648.3 24.6 400 57-496 15-441 (468)
50 1o20_A Gamma-glutamyl phosphat 100.0 1E-77 3.5E-82 623.3 30.2 390 55-495 13-422 (427)
51 4ghk_A Gamma-glutamyl phosphat 100.0 2.6E-77 9E-82 623.2 32.0 392 55-495 25-439 (444)
52 3my7_A Alcohol dehydrogenase/a 100.0 3.2E-77 1.1E-81 624.4 30.5 418 50-494 1-448 (452)
53 4gic_A HDH, histidinol dehydro 97.6 0.058 2E-06 53.9 27.6 342 71-496 26-403 (423)
54 1kae_A HDH, histidinol dehydro 97.1 0.27 9.4E-06 49.1 28.2 259 145-491 114-392 (434)
55 2fiu_A Conserved hypothetical 74.4 6.5 0.00022 30.8 6.0 60 344-422 16-76 (99)
56 3lo3_A Uncharacterized conserv 67.1 7.6 0.00026 30.1 4.8 60 344-422 15-75 (94)
57 1b93_A Protein (methylglyoxal 50.0 28 0.00095 29.6 5.7 113 156-297 12-135 (152)
58 2xw6_A MGS, methylglyoxal synt 47.7 8.3 0.00028 32.1 2.0 77 177-267 26-112 (134)
59 2yvq_A Carbamoyl-phosphate syn 43.0 26 0.00088 29.3 4.5 59 208-267 63-132 (143)
60 1vmd_A MGS, methylglyoxal synt 41.9 22 0.00074 31.1 3.8 118 151-297 22-151 (178)
61 3hhl_A RPA0582; alpha-beta-bar 36.8 26 0.00088 29.5 3.4 65 342-422 45-110 (143)
62 3fgh_A Transcription factor A, 30.2 1.2E+02 0.004 21.2 5.7 36 64-99 29-64 (67)
63 1s7i_A Hypothetical protein PA 26.1 1.8E+02 0.0062 23.4 6.8 28 395-423 81-108 (124)
64 2ioj_A Hypothetical protein AF 24.3 54 0.0019 26.9 3.4 47 216-262 53-100 (139)
65 2co9_A Thymus high mobility gr 24.3 2E+02 0.0069 22.0 6.6 39 65-103 49-87 (102)
66 2eqz_A High mobility group pro 23.7 1.6E+02 0.0055 21.7 5.7 37 63-99 47-83 (86)
67 3pm6_A Putative fructose-bisph 21.7 3.3E+02 0.011 25.8 8.5 93 175-268 44-152 (306)
68 2crj_A SWI/SNF-related matrix- 21.5 1.6E+02 0.0056 22.0 5.4 35 65-99 39-73 (92)
69 1hry_A Human SRY; DNA, DNA-bin 21.5 1.3E+02 0.0045 21.5 4.7 31 65-95 36-66 (76)
70 2xzm_K RPS14E; ribosome, trans 21.1 1.7E+02 0.0058 24.6 5.7 56 154-215 27-92 (151)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.3e-107 Score=857.68 Aligned_cols=470 Identities=29% Similarity=0.529 Sum_probs=441.4
Q ss_pred CCCceecCEEe--cCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010520 20 TPGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 20 ~~~~~i~g~~~--~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
+.++||||+|+ .++++++++||+||+++++++.++.+|+++|+++|++|++.|+.+|.++|.++|+++++.|++++++
T Consensus 6 ~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 85 (490)
T 2wme_A 6 EQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDE 85 (490)
T ss_dssp CBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46799999999 3678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhh-hHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHH
Q 010520 98 LGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 176 (508)
|+++++.|+|||+.+++. ++...++.++|++...+.+.++..+.. ++...+.+++|+|||++|+|||||+.+.+++++
T Consensus 86 la~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a 164 (490)
T 2wme_A 86 LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSA 164 (490)
T ss_dssp HHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEE-TTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccccc-CCcceeEEecceeEEEEeccccCcchhhhhhHH
Confidence 999999999999999986 699999999999998888776554433 455678899999999999999999999999999
Q ss_pred HHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH-
Q 010520 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ- 254 (508)
Q Consensus 177 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~- 254 (508)
+||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.++++.|++||+||+|+||||+.+|+.|++
T Consensus 165 ~ALaaGNtVVlKPse~tp~ta~~l~----~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 240 (490)
T 2wme_A 165 PALAAGNAMIFKPSEVTPLTALKLA----EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 240 (490)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHH----HHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCeEEEECCcCCHHHHHHHH----HHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHh
Confidence 9999999999999999999998775 556788999999999999 7889999999999999999999999998876
Q ss_pred HhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCC
Q 010520 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 255 ~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.+
T Consensus 241 ~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~ 320 (490)
T 2wme_A 241 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQD 320 (490)
T ss_dssp HHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCcc
Confidence 55667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEeCC
Q 010520 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~ 409 (508)
+++++||+++..+++++.++|++++++|+++++||...+ .+|+|++|||+ +++++|.+++||+||||++|++|+|
T Consensus 321 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 400 (490)
T 2wme_A 321 ENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD 400 (490)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESC
T ss_pred ccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCC
Confidence 999999999999999999999999999999999998743 36999999987 7999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhee
Q 010520 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489 (508)
Q Consensus 410 ~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k 489 (508)
+||||+++|+++|||++||||+|.+++++++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|
T Consensus 401 ~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~~-~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K 477 (490)
T 2wme_A 401 EDEAIRRANDTEYGLAAGVVTQDLARAHRAI--HRLEAGICWINTWGE-SPAEMPVGGYKQSGVGRENGLTTLAHYTRIK 477 (490)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCCSEEEESCCSC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEEcCCHHHHHHHH--HHCCeeEEEEeCCCC-CCCCCCcccccccccCchhHHHHHHHhhcee
Confidence 9999999999999999999999999999999 789999999998543 4567999999999999999999999999999
Q ss_pred EEEEeCCC
Q 010520 490 TCTINYGN 497 (508)
Q Consensus 490 ~v~~~~~~ 497 (508)
+|+++++.
T Consensus 478 ~v~i~~g~ 485 (490)
T 2wme_A 478 SVQVELGD 485 (490)
T ss_dssp EEEEECSC
T ss_pred EEEEECCC
Confidence 99999853
No 2
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=7.1e-105 Score=842.10 Aligned_cols=491 Identities=59% Similarity=1.029 Sum_probs=461.1
Q ss_pred cchhhhhhhhcCCCCCCCCceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHH
Q 010520 4 AKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83 (508)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~ 83 (508)
..-++++|+.+. ...+++.||||+|+.++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++
T Consensus 8 ~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~ 86 (500)
T 2j6l_A 8 NQPQYAWLKELG-LREENEGVYNGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEI 86 (500)
T ss_dssp GSGGGGGGGGGT-CCSEEECEESSSEECCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred ccchhHHHHhcC-CCCCCCceECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHH
Confidence 345778999999 4578899999999976788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeC
Q 010520 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITA 163 (508)
Q Consensus 84 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 163 (508)
|+++++.|+++.++|+++++.|+|||..+++.|+...++.+++++...+.+.+...+...++...+..++|+|||++|+|
T Consensus 87 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P 166 (500)
T 2j6l_A 87 VRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITA 166 (500)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECC
Confidence 99999999999999999999999999999999999999999999988776655443333344455778999999999999
Q ss_pred CCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEe
Q 010520 164 FNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFT 243 (508)
Q Consensus 164 ~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ft 243 (508)
||||+.+.++++++||++||+||+|||+.+|+++..+++++.++|+++|+|+|++|+|+|+.+.++.|++||+||+|+||
T Consensus 167 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FT 246 (500)
T 2j6l_A 167 FNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFT 246 (500)
T ss_dssp SSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEE
T ss_pred CcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred CCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHh
Q 010520 244 GSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323 (508)
Q Consensus 244 Gs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~ 323 (508)
||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 247 GS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 326 (500)
T 2j6l_A 247 GSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKA 326 (500)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCccccccccccee
Q 010520 324 YKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVL 402 (508)
Q Consensus 324 ~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl 402 (508)
++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ ++++++.+++||+||||+
T Consensus 327 ~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 406 (500)
T 2j6l_A 327 YAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPIL 406 (500)
T ss_dssp HHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEE
T ss_pred hhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceE
Confidence 9999999999999999999999999999999999999999999999864457999999988 699999999999999999
Q ss_pred EeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHH
Q 010520 403 YVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW 482 (508)
Q Consensus 403 ~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~ 482 (508)
+|++|+|+||||+++|+++|||+++|||+|.++++++++..++++|+|+||+++....+.+||||+|.||+|+++|.+++
T Consensus 407 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~ 486 (500)
T 2j6l_A 407 YVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAW 486 (500)
T ss_dssp EEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGG
T ss_pred EEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHH
Confidence 99999999999999999999999999999999999998545699999999987655556889999999999999999999
Q ss_pred HHhhheeEEEEeC
Q 010520 483 KQYMRRSTCTINY 495 (508)
Q Consensus 483 ~~~~~~k~v~~~~ 495 (508)
++|++.|+|++++
T Consensus 487 ~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 487 KQYMRRSTCTINY 499 (500)
T ss_dssp GGGEEEEEEEEEC
T ss_pred HHhhceEEEEEeC
Confidence 9999999999874
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=5.2e-104 Score=831.56 Aligned_cols=468 Identities=27% Similarity=0.479 Sum_probs=441.9
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010520 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
..++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++|++.|+.++.++|.++|+++++.|+++.++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999983 567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHH
Q 010520 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 177 (508)
|++++++|+|||+.+++.|+..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+.+.++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 171 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP 171 (484)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHH
Confidence 99999999999999999999999999999998877765554443334566788999999999999999999999999999
Q ss_pred HhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHh
Q 010520 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (508)
Q Consensus 178 ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (508)
||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||+|+||||+.+|+.|++.+
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~----~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~a 247 (484)
T 3ifg_A 172 ALAAGCPIVVKPAESTPFSALAMA----FLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQS 247 (484)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHH----HHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHH----HHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 999999999999999999998764 557889999999999999 678999999999999999999999999999999
Q ss_pred hhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCC
Q 010520 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (508)
Q Consensus 257 ~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 336 (508)
+++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.+++
T Consensus 248 a~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 248 APTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp GGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred hccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHH
Q 010520 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK 415 (508)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 415 (508)
+++||+++..+++++.+++++++++|+++++||...+.+|+|++|||+ +++++|++++||+||||++|++|+|+||||+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR 407 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999875557999999988 7999999999999999999999999999999
Q ss_pred HhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEe
Q 010520 416 INNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 416 ~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 494 (508)
++|+++|||+++|||+|.+++++++ .++++|+|+||+.. ...+.+||||+|.||+|+++|.+++++|++.|+|++.
T Consensus 408 ~aN~~~~GL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~-~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 408 LANDTEFGLAAYLYSRDIGRVWRVA--EALEYGMVGINTGL-ISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHCSSEESEEEEECCBHHHHHHHH--HHCCCSEEEESCSC-CCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEEcCCC-CCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999 78999999999864 3456899999999999999999999999999999875
No 4
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.8e-103 Score=832.79 Aligned_cols=470 Identities=30% Similarity=0.494 Sum_probs=444.3
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHh--HHhccCChhHHHHHHHHHHHHHHHhH
Q 010520 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEAS--KIWMELPAPKRGEVVRQIGDALREKL 95 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
.+++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++|+ +.|+.++.++|.++|+++++.|+++.
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR 111 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhH
Confidence 567999999994 56899999999999999999999999999999999999 88999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHH
Q 010520 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 175 (508)
++|++++++|+|||+.+++.|+..+++.+++++...+.+.+...+...++...+..++|+|||++|+|||||+.+.++++
T Consensus 112 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 191 (520)
T 3ed6_A 112 EALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKI 191 (520)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999998877665544433245567889999999999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH
Q 010520 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (508)
++||++||+||+|||+.+|+++.+++ +++.++|+|+|++|+|+| +.+.++.|++||+||+|+||||+.+|+.|++
T Consensus 192 apALaaGNtVVlKPs~~tp~t~~~l~----~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~ 267 (520)
T 3ed6_A 192 APALATGCSLVMKPSEITPLTTIRVF----ELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMK 267 (520)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHH----HHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEEcCCcchHHHHHHH----HHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999998764 556789999999999999 7889999999999999999999999999999
Q ss_pred HhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCC
Q 010520 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 255 ~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|
T Consensus 268 ~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 268 NAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred HhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEEeCC
Q 010520 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~ 409 (508)
+++++||+++..+++++.+++++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999998642 47999999988 6999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhee
Q 010520 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489 (508)
Q Consensus 410 ~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k 489 (508)
+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+.... .+.+||||+|.||+|+++|.+++++|++.|
T Consensus 428 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a--~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k 504 (520)
T 3ed6_A 428 EQEAIQLANDSIYGLAGAVFSKDIGKAQRVA--NKLKLGTVWINDFHPY-FAQAPWGGYKQSGIGRELGKEGLEEYLVSK 504 (520)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHH--HHSCCSEEEESCSCCC-CTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHH--HHCCcceEEECCCCCC-CCCCCcCCcCcCcCCccchHHHHHHhhceE
Confidence 9999999999999999999999999999999 7899999999997654 568999999999999999999999999999
Q ss_pred EEEEeCC
Q 010520 490 TCTINYG 496 (508)
Q Consensus 490 ~v~~~~~ 496 (508)
+|+++++
T Consensus 505 ~v~~~~~ 511 (520)
T 3ed6_A 505 HILTNTN 511 (520)
T ss_dssp EEEEESS
T ss_pred EEEEcCC
Confidence 9999985
No 5
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.3e-103 Score=830.81 Aligned_cols=467 Identities=27% Similarity=0.479 Sum_probs=441.8
Q ss_pred CCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHH
Q 010520 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (508)
Q Consensus 21 ~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (508)
.++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++|
T Consensus 33 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 112 (504)
T 3ek1_A 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDI 112 (504)
T ss_dssp SSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999984 5679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHH
Q 010520 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (508)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 178 (508)
+++++.|+|||+.+++.|+...++.++|++...+...+...+...++...+..++|+|||++|+|||||+.+.++++++|
T Consensus 113 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~A 192 (504)
T 3ek1_A 113 ALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPA 192 (504)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999998877665544443445667889999999999999999999999999999
Q ss_pred hhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhh
Q 010520 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (508)
Q Consensus 179 LaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (508)
|++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|++.++
T Consensus 193 LaaGN~VVlKPs~~tp~t~~~l----~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 193 LAAGCTMIVRPADLTPLTALAL----GVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHTCEEEEECCTTSCHHHHHH----HHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHcCCEEEEECCCcChHHHHHH----HHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 9999999999999999999876 4567889999999999998 6789999999999999999999999999999999
Q ss_pred hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCC
Q 010520 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337 (508)
Q Consensus 258 ~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~ 337 (508)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++
T Consensus 269 ~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 348 (504)
T 3ek1_A 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGV 348 (504)
T ss_dssp GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHH
Q 010520 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKI 416 (508)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 416 (508)
++||+++.++++++.+++++++++|+++++||.. .+|+|++|||+ ++++++.+++||+||||++|++|+|+||||++
T Consensus 349 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 426 (504)
T 3ek1_A 349 VIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQ 426 (504)
T ss_dssp CBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999999999976 36999999987 79999999999999999999999999999999
Q ss_pred hccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeCC
Q 010520 417 NNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 417 ~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
+|+++|||+++|||+|.+++++++ .++++|+|+||++. ...+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 427 aN~~~~GL~a~v~t~d~~~a~~~a--~~l~aG~V~vN~~~-~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~g 503 (504)
T 3ek1_A 427 ANDTIFGLAAYFYTENFSRAIRVS--EALEYGMVGHNTGL-ISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503 (504)
T ss_dssp HHCSSCCSEEEEECCBHHHHHHHH--HHSCCSEEEESCSC-CCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEECC
T ss_pred HhCCCCCeEEEEEcCCHHHHHHHH--HhCCcCeEEECCCC-CCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEecC
Confidence 999999999999999999999999 78999999999865 345679999999999999999999999999999998764
No 6
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1e-103 Score=834.83 Aligned_cols=483 Identities=26% Similarity=0.418 Sum_probs=446.0
Q ss_pred hhhhcCCCCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHH
Q 010520 10 FLSEIGLSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQI 87 (508)
Q Consensus 10 ~~~~~~~~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~ 87 (508)
.=+|++++-..+++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++
T Consensus 16 ~~~~~~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 95 (521)
T 4e4g_A 16 ENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKF 95 (521)
T ss_dssp --------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred hhhhHhhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 3458888877889999999994 46799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCc
Q 010520 88 GDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFP 167 (508)
Q Consensus 88 a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 167 (508)
++.|++++++|+++++.|+|||+.+++.|+...++.+++++...+.+.+...+...++...+..++|+|||++|+|||||
T Consensus 96 a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P 175 (521)
T 4e4g_A 96 VQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFP 175 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCT
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcch
Confidence 99999999999999999999999999999999999999999887776654332222344677889999999999999999
Q ss_pred hhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHH
Q 010520 168 CAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTK 247 (508)
Q Consensus 168 ~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~ 247 (508)
+.+.++++++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+|+.+.++.|++||+||+|+||||+.
T Consensus 176 ~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~----~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~ 251 (521)
T 4e4g_A 176 GMIPMWMFAPAIACGNAFILKPSERDPSVPIRLA----ELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTP 251 (521)
T ss_dssp THHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHH----HHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHH----HHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHH
Confidence 9999999999999999999999999999998764 557889999999999999777889999999999999999999
Q ss_pred HHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecc-cHHHHHHHHHHhhhh
Q 010520 248 VGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHES-IYQTVLDQLVDVYKQ 326 (508)
Q Consensus 248 ~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~L~~~~~~ 326 (508)
+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +||+|+++|++++++
T Consensus 252 vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~ 331 (521)
T 4e4g_A 252 IARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVES 331 (521)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc----CCCCceeccEEE-ecCCCCcccccccccce
Q 010520 327 VKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI----ESEGNFVQPTIV-EISPTADIVKEELFAPV 401 (508)
Q Consensus 327 ~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~----~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPv 401 (508)
+++|+|.++++++||+++..+++++.+++++++++|+++++||... +.+|+|++|||+ +++++|++++||+||||
T Consensus 332 ~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 411 (521)
T 4e4g_A 332 LRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPV 411 (521)
T ss_dssp CCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred ccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcE
Confidence 9999999999999999999999999999999999999999999752 247999999988 79999999999999999
Q ss_pred eEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC--CcchH
Q 010520 402 LYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG--REAGS 479 (508)
Q Consensus 402 l~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g--~~~g~ 479 (508)
++|++|+|+||||+++|+++|||++||||+|.+++++++ .++++|+|+||+++....+.+||||+|.||+| +++|.
T Consensus 412 l~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~ 489 (521)
T 4e4g_A 412 LSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFA--SRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGT 489 (521)
T ss_dssp EEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHH--HHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHH
T ss_pred EEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHH--HhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchH
Confidence 999999999999999999999999999999999999999 78999999999986655567899999999999 78999
Q ss_pred HHHHHhhheeEEEEeCCCC
Q 010520 480 DSWKQYMRRSTCTINYGNE 498 (508)
Q Consensus 480 ~~~~~~~~~k~v~~~~~~~ 498 (508)
+++++|++.|+|+++++..
T Consensus 490 ~gl~~ft~~K~v~~~~~~~ 508 (521)
T 4e4g_A 490 DSIKFWTRTKTITSRWPSG 508 (521)
T ss_dssp HHHHHTEEEEEEEECCCCC
T ss_pred HHHHHhheEEEEEEecCcc
Confidence 9999999999999987654
No 7
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=2.5e-103 Score=829.05 Aligned_cols=470 Identities=28% Similarity=0.474 Sum_probs=442.6
Q ss_pred CCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHH
Q 010520 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 19 ~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENRE 89 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4567899999994 56899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEE-eecceEEEEeCCCCchhhhHHHH
Q 010520 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETW-NPLGVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~~~l 175 (508)
+|+++++.|+|||+.+++.|+...++.+++++...+...+...+.. .+...+..+ +|+|||++|+|||||+.+.++++
T Consensus 90 ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 168 (506)
T 3rh9_A 90 EIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKL 168 (506)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeeEeecccceEEEEECCCchHHHHHHHHH
Confidence 9999999999999999999999999999999998887766544332 345667788 99999999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH
Q 010520 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (508)
++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|++
T Consensus 169 a~ALaaGN~VVlKps~~tp~t~~~l~----~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~ 244 (506)
T 3rh9_A 169 SAALAAGCPSVIKPASETPLTMIAFF----SVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIV 244 (506)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHH----HHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEEcCCccHHHHHHHH----HHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence 99999999999999999999998764 557789999999999999 6789999999999999999999999999999
Q ss_pred HhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCC
Q 010520 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 255 ~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 245 ~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 245 DTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp HTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred HhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC-CCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHH
Q 010520 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES-EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEE 412 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~-~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~e 412 (508)
+++++||+++.++++++.+++++++++|+++++||...+. .|+|++|||+ ++++++++++||+||||++|++|+|+||
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 404 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEE 404 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHH
Confidence 9999999999999999999999999999999999986554 7999999988 7999999999999999999999999999
Q ss_pred HHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEE
Q 010520 413 AVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 413 ai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~ 492 (508)
||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 405 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~ 481 (506)
T 3rh9_A 405 VIDAGNDTEFGLASYVFTADAERAQRVA--AGLRFGHVGWNTGTGP-TPEAPFGGMKASGIGREGGLEGLFEFVEAQTVP 481 (506)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHH--HHCCCSEEEESCCCCC-CTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEE
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcceEEEcCCCCC-CCCCCccCcCcCcCCcCccHHHHHHhcceEEEE
Confidence 9999999999999999999999999999 7899999999997653 467999999999999999999999999999998
Q ss_pred EeCC
Q 010520 493 INYG 496 (508)
Q Consensus 493 ~~~~ 496 (508)
++..
T Consensus 482 ~~~~ 485 (506)
T 3rh9_A 482 RGFA 485 (506)
T ss_dssp EC--
T ss_pred EcCc
Confidence 8753
No 8
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1.7e-103 Score=829.66 Aligned_cols=469 Identities=25% Similarity=0.416 Sum_probs=441.4
Q ss_pred CCCCceecCEEecCCC-eEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010520 19 ETPGCFVNGKWKAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 19 ~~~~~~i~g~~~~~~~-~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
...++||||+|+.+.. +++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++.++
T Consensus 24 ~~~~~~I~G~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 103 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADE 103 (498)
T ss_dssp CCCCEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cccCeeECCEEeeCCCCeEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4567999999995333 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhh-hhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHH
Q 010520 98 LGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 176 (508)
|+++++.|+|||..++ +.|+...++.+++++...+.+.+...+...++...+..++|+|||++|+|||||+.+.+++++
T Consensus 104 la~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 183 (498)
T 4f3x_A 104 FAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLA 183 (498)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHHH
Confidence 9999999999999999 889999999999999988776554433223455678899999999999999999999999999
Q ss_pred HHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHH
Q 010520 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (508)
Q Consensus 177 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (508)
+||++||+||+|||+.+|+++..+++ ++.++ +|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|++.
T Consensus 184 ~ALaaGNtVVlKPs~~tp~t~~~l~~----l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~ 258 (498)
T 4f3x_A 184 PAIGGGNTVVFKPSEQTPLTALKLAR----LIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAA 258 (498)
T ss_dssp HHHHTTCEEEEECCTTCCHHHHHHHH----HHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCeEEEECCcccHHHHHHHHH----HHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999988754 56777 99999999999 77899999999999999999999999999999
Q ss_pred hhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCC
Q 010520 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEK 335 (508)
Q Consensus 256 a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~ 335 (508)
++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 259 aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~ 338 (498)
T 4f3x_A 259 AAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDT 338 (498)
T ss_dssp HHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGG
T ss_pred HHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHHHHHHHHHHHHHCCC-eEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHH
Q 010520 336 GTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (508)
Q Consensus 336 ~~~~gpl~~~~~~~~~~~~v~~a~~~ga-~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 413 (508)
++++||+++..+++++.+++++++++|+ ++++||...+.+|+|++|||+ ++++++.+++||+||||++|++|+|+|||
T Consensus 339 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 418 (498)
T 4f3x_A 339 ENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDA 418 (498)
T ss_dssp GCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCH
T ss_pred cCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHH
Confidence 9999999999999999999999999999 999999875568999999988 78999999999999999999999999999
Q ss_pred HHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010520 414 VKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 414 i~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
|+++|+++|||+++|||+|.+++++++ .++++|+|+||+++... +.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 419 i~~aN~~~~GL~a~v~t~d~~~a~~~a--~~l~aG~V~vN~~~~~~-~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~ 495 (498)
T 4f3x_A 419 VAWANDSDYGLASSVWTKDISKAMRAA--SRLQYGCTWINTHFMLT-NEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMI 495 (498)
T ss_dssp HHHHHSSSCCSEEEEECSBHHHHHHHH--HHCCSSEEEESCCSCCC-TTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHhcCCCCceEEEECCCHHHHHHHH--HhCCcceEEEcCCCCCC-CCCCcCCcCcCCcCccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999 78999999999976543 789999999999999999999999999999998
Q ss_pred eC
Q 010520 494 NY 495 (508)
Q Consensus 494 ~~ 495 (508)
++
T Consensus 496 ~~ 497 (498)
T 4f3x_A 496 NH 497 (498)
T ss_dssp EC
T ss_pred eC
Confidence 75
No 9
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=5.3e-103 Score=823.56 Aligned_cols=467 Identities=30% Similarity=0.501 Sum_probs=434.0
Q ss_pred ceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHH
Q 010520 23 CFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLL 102 (508)
Q Consensus 23 ~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~ 102 (508)
+||||+|+.+++ ++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++|++++
T Consensus 2 ~~I~G~~~~~~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~ 80 (486)
T 3pqa_A 2 MFIDGKWINRED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKIL 80 (486)
T ss_dssp -------CCCCC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred eeECCEEecCCC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999997667 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcC
Q 010520 103 SIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCG 182 (508)
Q Consensus 103 ~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaG 182 (508)
+.|+|||..+++.|+...++.+++++...+.+.+...+. ++...+..++|+|||++|+|||||+.+.++++++||++|
T Consensus 81 ~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaG 158 (486)
T 3pqa_A 81 AIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATG 158 (486)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC--TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC--CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999887765544332 245678899999999999999999999999999999999
Q ss_pred CEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccC
Q 010520 183 NCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261 (508)
Q Consensus 183 N~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~ 261 (508)
|+||+|||+.+|+++..+++++.++++++|+|+|++|+|+| +.++++.|++||+||+|+||||+.+|+.|++.++ ++
T Consensus 159 N~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~ 236 (486)
T 3pqa_A 159 NVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FK 236 (486)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SS
T ss_pred CEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CC
Confidence 99999999999999999999999999999999999999999 6778999999999999999999999999999987 89
Q ss_pred ceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCC
Q 010520 262 KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGP 341 (508)
Q Consensus 262 ~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gp 341 (508)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||
T Consensus 237 ~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 316 (486)
T 3pqa_A 237 KIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGP 316 (486)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCC
T ss_pred ceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCC
Q 010520 342 LHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVP 421 (508)
Q Consensus 342 l~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 421 (508)
+++..+++++.+++++++++|+++++||.. .|+|++|||++++++|++++||+||||++|++|+| ||||+++|+++
T Consensus 317 li~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~ 392 (486)
T 3pqa_A 317 LISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTILEVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTE 392 (486)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSS
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEEeCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCC
Confidence 999999999999999999999999999975 58999999889999999999999999999999999 99999999999
Q ss_pred CCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeCCCCCC
Q 010520 422 QGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGNELP 500 (508)
Q Consensus 422 ~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~~~~ 500 (508)
|||+++|||+|.+++++++ .++++|+|+||+++......+||||+|.||+|+++|.+++++|++.|+|++++....+
T Consensus 393 ~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~~~~~ 469 (486)
T 3pqa_A 393 YGLHSAIFTNDINKSLKFA--ENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAENLY 469 (486)
T ss_dssp CCSEEEEECSBHHHHHHHH--HHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC-----
T ss_pred CCcEEEEECCCHHHHHHHH--HhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCCccCC
Confidence 9999999999999999999 7899999999997654445789999999999999999999999999999998765544
No 10
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=3.7e-103 Score=828.38 Aligned_cols=475 Identities=28% Similarity=0.490 Sum_probs=444.4
Q ss_pred CCCCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHH
Q 010520 15 GLSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALR 92 (508)
Q Consensus 15 ~~~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~ 92 (508)
..+..++++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+
T Consensus 7 ~~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~ 86 (497)
T 3k2w_A 7 DLHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIR 86 (497)
T ss_dssp CCCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred cccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 34456778999999994 4679999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhH
Q 010520 93 EKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (508)
Q Consensus 93 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 172 (508)
++.++|+++++.|+|||..+++.|+...++.+++++...+...+...+....+...+..++|+|||++|+|||||+.+.+
T Consensus 87 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 166 (497)
T 3k2w_A 87 ENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAG 166 (497)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHH
Confidence 99999999999999999999999999999999999988877665544333345567888999999999999999999999
Q ss_pred HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHH
Q 010520 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (508)
Q Consensus 173 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (508)
+++++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||+|+||||+.+|+.
T Consensus 167 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~----~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~ 242 (497)
T 3k2w_A 167 RKIGPALITGNTMVLKPTQETPLATTELG----RIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQ 242 (497)
T ss_dssp HHHHHHHHTTCEEEEECCSSSCHHHHHHH----HHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCChHHHHHHH----HHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHH
Confidence 99999999999999999999999998764 557889999999999999 7789999999999999999999999999
Q ss_pred HHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCC
Q 010520 252 VQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (508)
Q Consensus 252 i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 331 (508)
|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 243 i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~ 322 (497)
T 3k2w_A 243 IYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGD 322 (497)
T ss_dssp HHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcc--cCC--CCceeccEEE-ecCCCCcccccccccceeEeEE
Q 010520 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV--IES--EGNFVQPTIV-EISPTADIVKEELFAPVLYVMK 406 (508)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~--~~~--~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~ 406 (508)
|.++++++||+++.++++++.+++++++++|+++++||.. .+. +|+|++|||+ ++++++++++||+||||++|++
T Consensus 323 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (497)
T 3k2w_A 323 PMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVK 402 (497)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEE
Confidence 9999999999999999999999999999999999999973 233 7999999988 7999999999999999999999
Q ss_pred eCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhh
Q 010520 407 FQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486 (508)
Q Consensus 407 ~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~ 486 (508)
|+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++|+
T Consensus 403 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~-~~~~PfGG~k~SG~G~~~G~~gl~~ft 479 (497)
T 3k2w_A 403 VSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAI--SDLEVGEVYINRGMGE-QHQGFHNGWKQSGFGGEDGKFGLEQYL 479 (497)
T ss_dssp ESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHH--HHCCSSEEEESCCSCC-CTTSCBCCEETSEESCBSHHHHHHTTE
T ss_pred eCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHH--HhCCeeEEEEcCCCCC-CCCCCcCCcCCCcCCccchHHHHHHhc
Confidence 9999999999999999999999999999999999 7899999999997654 468999999999999999999999999
Q ss_pred heeEEEEeCC
Q 010520 487 RRSTCTINYG 496 (508)
Q Consensus 487 ~~k~v~~~~~ 496 (508)
+.|+|+++++
T Consensus 480 ~~k~v~~~~~ 489 (497)
T 3k2w_A 480 EKKTVYINEA 489 (497)
T ss_dssp EEEEEEEECC
T ss_pred ceEEEEEEcc
Confidence 9999999875
No 11
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.1e-102 Score=828.17 Aligned_cols=475 Identities=28% Similarity=0.480 Sum_probs=445.9
Q ss_pred CCCCceecCEEec--CCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHh--HHhccCChhHHHHHHHHHHHHHHH
Q 010520 19 ETPGCFVNGKWKA--HGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEAS--KIWMELPAPKRGEVVRQIGDALRE 93 (508)
Q Consensus 19 ~~~~~~i~g~~~~--~~~~~~v~~P~~-g~~i~~v~~~~~~~v~~al~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~ 93 (508)
..+++||||+|+. ++++++++||+| |+++++++.++.+|+++++++|++|+ ..|+.++.++|.++|+++++.|++
T Consensus 21 ~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3u4j_A 21 SRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILA 100 (528)
T ss_dssp CBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHH
Confidence 3567999999994 467999999999 99999999999999999999999999 789999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHH
Q 010520 94 KLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (508)
Q Consensus 94 ~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 173 (508)
+.++|+++++.|+|||..+++.|+...++.+++++...+...+...+....+...+..++|+|||++|+|||||+.+.++
T Consensus 101 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 101 RQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence 99999999999999999999999999999999999988776654444332455678899999999999999999999999
Q ss_pred HHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHH
Q 010520 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (508)
Q Consensus 174 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (508)
++++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~----~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 256 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLA----ELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKL 256 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHH----HHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCccHHHHHHHH----HHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHH
Confidence 9999999999999999999999998775 456788999999999999 78899999999999999999999999999
Q ss_pred HHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCC
Q 010520 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (508)
Q Consensus 253 ~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p 332 (508)
++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 257 ~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 336 (528)
T 3u4j_A 257 GEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDP 336 (528)
T ss_dssp HHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECT
T ss_pred HHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC-CCceeccEEE-ecCCCCcccccccccceeEeEEeCCH
Q 010520 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES-EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~-~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
.++++++||+++.++++++.+++++++++|+++++||...+. +|+|++|||+ ++++++++++||+||||++|++|+|+
T Consensus 337 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 416 (528)
T 3u4j_A 337 LNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTA 416 (528)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCH
Confidence 999999999999999999999999999999999999987544 7999999988 78999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeE
Q 010520 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~ 490 (508)
||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 417 deAi~~aN~~~~GL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~ 493 (528)
T 3u4j_A 417 DEAVALANATEFGLSASVWSTNLETALQTI--RRIRAGRCWINSVID-GTPELPIGGYKKSGLGRELGRYGFDEYSQFKG 493 (528)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCCSEEEESCCSC-CCTTSCBCCSGGGEESCBSTTHHHHHTEEEEE
T ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHH--HhCCeeEEEECCCCC-CCCCCCcCCcCcCCCCcCchHHHHHHhhceEE
Confidence 999999999999999999999999999999 789999999999754 35689999999999999999999999999999
Q ss_pred EEEeCCCCCC
Q 010520 491 CTINYGNELP 500 (508)
Q Consensus 491 v~~~~~~~~~ 500 (508)
|+++++...+
T Consensus 494 v~~~~~~~~~ 503 (528)
T 3u4j_A 494 VHVTLGRPAP 503 (528)
T ss_dssp EEEESSCCCC
T ss_pred EEEeCCCCCC
Confidence 9999864333
No 12
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=2.3e-102 Score=823.56 Aligned_cols=474 Identities=30% Similarity=0.497 Sum_probs=443.1
Q ss_pred CCCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH-----HhccCChhHHHHHHHHHH
Q 010520 16 LSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-----IWMELPAPKRGEVVRQIG 88 (508)
Q Consensus 16 ~~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~-----~w~~~~~~~R~~~L~~~a 88 (508)
++....++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++
T Consensus 3 ~~~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a 82 (503)
T 3iwj_A 3 IPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIA 82 (503)
T ss_dssp -CCCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHH
T ss_pred CCCCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHH
Confidence 4456778999999983 567899999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcc---cCCCCCceeEEEEeecceEEEEeCCC
Q 010520 89 DALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI---PSERPNHMMLETWNPLGVVGVITAFN 165 (508)
Q Consensus 89 ~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~GVv~~i~p~n 165 (508)
+.|++++++|++++++|+|||+.+++.|+..+++.+++++...+.+.+... .....+...+..++|+|||++|+|||
T Consensus 83 ~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 162 (503)
T 3iwj_A 83 AKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWN 162 (503)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCc
Confidence 999999999999999999999999999999999999999988776544321 11123446788999999999999999
Q ss_pred CchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeC
Q 010520 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244 (508)
Q Consensus 166 ~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftG 244 (508)
||+.+.++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||+||.|+|||
T Consensus 163 ~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTG 238 (503)
T 3iwj_A 163 YPMLMATWKVAPALAAGCAAILKPSELASLTCLEL----GEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTG 238 (503)
T ss_dssp SHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEES
T ss_pred hHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHH----HHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEEC
Confidence 99999999999999999999999999999999876 4557889999999999999 668999999999999999999
Q ss_pred CHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhh
Q 010520 245 STKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVY 324 (508)
Q Consensus 245 s~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~ 324 (508)
|+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 239 S~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 318 (503)
T 3iwj_A 239 SSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWI 318 (503)
T ss_dssp CHHHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceeccEEE-ecCCCCcccccccccce
Q 010520 325 KQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPV 401 (508)
Q Consensus 325 ~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPv 401 (508)
+++++|||.++++++||+++.++++++.+++++++++|+++++||...+ ..|+|++|||+ +++++|.+++||+||||
T Consensus 319 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 398 (503)
T 3iwj_A 319 KNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPV 398 (503)
T ss_dssp HTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred HhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCce
Confidence 9999999999999999999999999999999999999999999998644 57999999988 79999999999999999
Q ss_pred eEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHH
Q 010520 402 LYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDS 481 (508)
Q Consensus 402 l~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~ 481 (508)
++|++|+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.++
T Consensus 399 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~~-~~~~~PfGG~k~SG~G~~~G~~g 475 (503)
T 3iwj_A 399 LCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVT--KAFKAGIVWVNCSQP-CFTQAPWGGVKRSGFGRELGEWG 475 (503)
T ss_dssp EEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHH--HHCCSSEEEESSSCC-CCTTSCBCCSGGGEECCBSHHHH
T ss_pred EEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHH--HhCCcceEEEcCCCC-CCCCCCcCCcCcccCCCcchHHH
Confidence 999999999999999999999999999999999999999 789999999998643 45679999999999999999999
Q ss_pred HHHhhheeEEEEeCC
Q 010520 482 WKQYMRRSTCTINYG 496 (508)
Q Consensus 482 ~~~~~~~k~v~~~~~ 496 (508)
+++|++.|+|+++++
T Consensus 476 ~~~f~~~k~v~~~~~ 490 (503)
T 3iwj_A 476 LDNYLSVKQVTQYIS 490 (503)
T ss_dssp HHTTEEEEEEEEECC
T ss_pred HHHhhCeEEEEEeCC
Confidence 999999999999875
No 13
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=1.7e-102 Score=824.73 Aligned_cols=468 Identities=26% Similarity=0.509 Sum_probs=438.5
Q ss_pred CCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhccCChhHHHHHHHHHHHHHHHhHH
Q 010520 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 21 ~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
.++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+++.+
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999994 467899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCC---CCCceeEEEEeecceEEEEeCCCCchhhhH
Q 010520 97 HLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSE---RPNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 172 (508)
+|+++++.|+|||+.+++ .|+..+++.++|++...+.+.+...+.. ..+...+..++|+|||++|+|||||+..++
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 999999999999999998 8999999999999988877655433321 122256788999999999999999999999
Q ss_pred HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHH
Q 010520 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (508)
Q Consensus 173 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (508)
+++++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.+++|++||+||+|+||||+.+|+.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~----~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~ 272 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFA----ELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHH----HHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHH----HHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHH
Confidence 99999999999999999999999998774 556789999999999999 6788999999999999999999999999
Q ss_pred HHHHhh-hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccC
Q 010520 252 VQQTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (508)
Q Consensus 252 i~~~a~-~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g 330 (508)
|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 273 I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG 352 (517)
T 2o2p_A 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352 (517)
T ss_dssp HHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred HHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCC
Confidence 999999 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCC
Q 010520 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (508)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~ 409 (508)
||.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 353 dp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 432 (517)
T 2o2p_A 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFAD 432 (517)
T ss_dssp CTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECT
T ss_pred CCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCC
Confidence 999999999999999999999999999999999999999864446999999987 7999999999999999999999999
Q ss_pred --HHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhh
Q 010520 410 --FEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487 (508)
Q Consensus 410 --~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~ 487 (508)
+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++
T Consensus 433 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~ 509 (517)
T 2o2p_A 433 GDVDAVLSRANATEFGLASGVFTRDINKALYVS--DKLQAGTVFINTYNK-TDVAAPFGGFKQSGFGKDLGEAALNEYLR 509 (517)
T ss_dssp TCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHH--HHCCSSEEEESCSSC-CCTTSCBCCCGGGEECCBSHHHHHHTTEE
T ss_pred CCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHH--HhcCEeEEEECCCCC-CCCCCCcCCcCcCCcCccChHHHHHHhCC
Confidence 9999999999999999999999999999999 789999999998643 34679999999999999999999999999
Q ss_pred eeEEEEeC
Q 010520 488 RSTCTINY 495 (508)
Q Consensus 488 ~k~v~~~~ 495 (508)
.|+|++++
T Consensus 510 ~k~v~~~~ 517 (517)
T 2o2p_A 510 IKTVTFEY 517 (517)
T ss_dssp EEEEEEEC
T ss_pred ceEEEeeC
Confidence 99998864
No 14
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=2.1e-102 Score=822.61 Aligned_cols=471 Identities=27% Similarity=0.468 Sum_probs=438.2
Q ss_pred CCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHH
Q 010520 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 19 ~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
...++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.+
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKE 89 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4457899999994 45789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCC-C----CceeEEEEeecceEEEEeCCCCchhhh
Q 010520 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER-P----NHMMLETWNPLGVVGVITAFNFPCAVL 171 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~P~GVv~~i~p~n~P~~~~ 171 (508)
+|+++++.|+|||..+++.|+..+++.+++++...+...+...+... + +...+..++|+|||++|+|||||+.+.
T Consensus 90 ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 90 IIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 99999999999999999999999999999999888776554332211 2 345678899999999999999999999
Q ss_pred HHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHH
Q 010520 172 GWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGL 250 (508)
Q Consensus 172 ~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~ 250 (508)
++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l----~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~ 245 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKM----VEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGE 245 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHH----HHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHH
Confidence 99999999999999999999999999876 5667899999999999999 678999999999999999999999999
Q ss_pred HHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccC
Q 010520 251 MVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (508)
Q Consensus 251 ~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g 330 (508)
.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 246 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 246 RISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 9999988 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCC
Q 010520 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (508)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~ 409 (508)
||. +++++||+++.++++++.+++++++++|+++++||.. .|+|++|||+ ++++++++++||+||||++|++|+|
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~ 399 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKD 399 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCC
Confidence 999 9999999999999999999999999999999999974 6899999988 6999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhee
Q 010520 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489 (508)
Q Consensus 410 ~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k 489 (508)
+||||+++|+++|||++||||+|.+++++++ .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|
T Consensus 400 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k 477 (505)
T 3prl_A 400 ANEAISLSNQSDYGLQASIFTKDTDRAINIG--KHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRER 477 (505)
T ss_dssp HHHHHHHHHTSSEESEEEEECSCHHHHHHHH--HTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEE
T ss_pred HHHHHHHHhCCCCCeEEEEEcCCHHHHHHHH--HHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceE
Confidence 9999999999999999999999999999999 78999999999976655678999999999999999999999999999
Q ss_pred EEEEeCCCCCCC
Q 010520 490 TCTINYGNELPL 501 (508)
Q Consensus 490 ~v~~~~~~~~~~ 501 (508)
+|+++++...++
T Consensus 478 ~v~~~~~~~~~~ 489 (505)
T 3prl_A 478 VTVLNLAENLYF 489 (505)
T ss_dssp EEEEEC------
T ss_pred EEEEeCCCcccC
Confidence 999998776654
No 15
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=7.3e-102 Score=821.19 Aligned_cols=473 Identities=26% Similarity=0.463 Sum_probs=443.2
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010520 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++
T Consensus 26 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (515)
T 2d4e_A 26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADE 105 (515)
T ss_dssp CBCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456899999994 457899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHH
Q 010520 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 177 (508)
|+++++.|+|||+.+++.|+..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+.+.++++++
T Consensus 106 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 185 (515)
T 2d4e_A 106 LAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAP 185 (515)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhH
Confidence 99999999999999999999999999999999887766544333233445678999999999999999999999999999
Q ss_pred HhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHh
Q 010520 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (508)
Q Consensus 178 ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (508)
||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||+|+||||+.+|+.|++.+
T Consensus 186 ALaaGN~VVlKps~~tp~t~~~l~----~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~a 261 (515)
T 2d4e_A 186 ALAFGNTVVLKPAEWSPFTATKLA----EILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNA 261 (515)
T ss_dssp HHHTTCCEEEECCTTSCHHHHHHH----HHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCeeeecCCCCcHHHHHHHH----HHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHH
Confidence 999999999999999999998774 556789999999999999 678899999999999999999999999999999
Q ss_pred hhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCC
Q 010520 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (508)
Q Consensus 257 ~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 336 (508)
+++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 262 a~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 341 (515)
T 2d4e_A 262 ADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPE 341 (515)
T ss_dssp GGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred hhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--------CCCceeccEEE-ecCCCCcccccccccceeEeEEe
Q 010520 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--------SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (508)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~--------~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~ 407 (508)
+++||+++.++++++.+++++++++|+++++||...+ ..|+|++|||+ + +++|.+++||+||||++|++|
T Consensus 342 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~ 420 (515)
T 2d4e_A 342 TEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPF 420 (515)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEE
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEee
Confidence 9999999999999999999999999999999997633 26999999987 6 889999999999999999999
Q ss_pred CCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhh
Q 010520 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487 (508)
Q Consensus 408 ~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~ 487 (508)
+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++|++
T Consensus 421 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~ 497 (515)
T 2d4e_A 421 KDEEEALRKANDTKYGLAAYVFTRDLERAHRLA--LELEAGMVYLNSHNV-RHLPTPFGGVKGSGDRREGGTYALDFYTD 497 (515)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCSSEEEESSSCC-CCTTSCBCCSGGGBCSCBSHHHHHHHHEE
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH--HhCCeeEEEECCCCC-CCCCCCCCCcCCCCCCccchHHHHHHhCc
Confidence 999999999999999999999999999999999 789999999998654 45679999999999999999999999999
Q ss_pred eeEEEEeCCCCCC
Q 010520 488 RSTCTINYGNELP 500 (508)
Q Consensus 488 ~k~v~~~~~~~~~ 500 (508)
.|+|+++++.+.|
T Consensus 498 ~K~v~~~~~~~~~ 510 (515)
T 2d4e_A 498 LKTIALPLRPPHV 510 (515)
T ss_dssp EEEEEEESSCCCC
T ss_pred eeEEEEcCCCCCC
Confidence 9999999876666
No 16
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=8.5e-102 Score=816.22 Aligned_cols=469 Identities=28% Similarity=0.528 Sum_probs=441.8
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010520 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999994 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHH
Q 010520 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 177 (508)
|+++++.|+|||..+++.|+..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+.+.++++++
T Consensus 89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 168 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 168 (481)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999998876655544443334556788999999999999999999999999999
Q ss_pred HhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHh
Q 010520 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (508)
Q Consensus 178 ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (508)
||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|++.+
T Consensus 169 ALaaGN~VVlKps~~tp~~~~~l~----~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~a 244 (481)
T 3jz4_A 169 ALAAGCTMVLKPASQTPFSALALA----ELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQC 244 (481)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHH----HHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCCCcHHHHHHH----HHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999998764 557888999999999999 788999999999999999999999999999999
Q ss_pred hhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCC
Q 010520 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (508)
Q Consensus 257 ~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 336 (508)
+++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 245 a~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 245 AKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp TTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred hhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHH
Q 010520 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK 415 (508)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 415 (508)
+++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ ++++++.+++||+||||++|++|+|+||||+
T Consensus 325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 404 (481)
T 3jz4_A 325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIA 404 (481)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHH
Confidence 999999999999999999999999999999999875557899999988 7999999999999999999999999999999
Q ss_pred HhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010520 416 INNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 416 ~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
++|+++|||+++|||+|.+++++++ .++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++|++.|+|++.+
T Consensus 405 ~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~~ 481 (481)
T 3jz4_A 405 QANDTEFGLAAYFYARDLSRVFRVG--EALEYGIVGINTGII-SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481 (481)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHH--HHCCCSEEEESCSCC-CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHhcCCCCceEEEECCCHHHHHHHH--HhCCeeeEEECCCCC-CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEeC
Confidence 9999999999999999999999999 789999999999654 4567999999999999999999999999999998753
No 17
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=4.5e-102 Score=825.32 Aligned_cols=475 Identities=29% Similarity=0.478 Sum_probs=443.4
Q ss_pred CCCCCceecCEEecCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHH
Q 010520 18 PETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 18 ~~~~~~~i~g~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
+.++++||||+|+.++.+++++||+| |+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++++
T Consensus 35 ~~~~~~~I~G~~~~~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (538)
T 3qan_A 35 GKEYPLIINGERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKH 114 (538)
T ss_dssp TEEECEEETTEEECCSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CcccceeECCEEecCCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34678999999998788999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhh-hhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHH
Q 010520 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGL-SRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 175 (508)
+|+++++.|+|||..+++.|+..+++.+++++.. .+...+...+.. .+...+..++|+|||++|+|||||+.+.++++
T Consensus 115 ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 193 (538)
T 3qan_A 115 EFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSR-PGEQNRYFYTPMGVTVTISPWNFALAIMVGTA 193 (538)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-TTEEEEEEEEECCEEEEECCSTTTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccc-CCcceeeecCCCcEEEEECCCchHHHHHHHHH
Confidence 9999999999999999999999999999999988 666665544432 35567889999999999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH
Q 010520 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (508)
++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|++
T Consensus 194 a~ALaaGN~VVlKps~~tp~ta~~l----~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 269 (538)
T 3qan_A 194 VAPIVTGNTVVLKPASTTPVVAAKF----VEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYE 269 (538)
T ss_dssp HHHHHTTCEEEEECCTTSHHHHHHH----HHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCccHHHHHHH----HHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999876 4567889999999999999 7789999999999999999999999999999
Q ss_pred Hhhhc------cCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcc
Q 010520 255 TVHQR------FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328 (508)
Q Consensus 255 ~a~~~------~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~ 328 (508)
.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 270 ~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 349 (538)
T 3qan_A 270 RAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLT 349 (538)
T ss_dssp HHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCC
T ss_pred HhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhcc
Confidence 99988 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEe
Q 010520 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (508)
Q Consensus 329 ~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~ 407 (508)
+|||.++++++||+++..+++++.+++++++++| ++++||...+..|+|++|||+ ++++++++++||+||||++|++|
T Consensus 350 vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 428 (538)
T 3qan_A 350 VGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKA 428 (538)
T ss_dssp BSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEe
Confidence 9999999999999999999999999999999999 999999875447999999988 78999999999999999999999
Q ss_pred CCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEc-CCCCCCCCCCCccCCCCCCCC-CcchHHHHHHh
Q 010520 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVN-IPTNGAEIGGAFGGEKATGGG-REAGSDSWKQY 485 (508)
Q Consensus 408 ~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN-~~~~~~~~~~pfGG~~~SG~g-~~~g~~~~~~~ 485 (508)
+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+|| ..+....+.+||||+|.||+| +++|.+++++|
T Consensus 429 ~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~f 506 (538)
T 3qan_A 429 NDFDHALEIANNTEYGLTGAVITRNRAHIEQAK--REFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALH 506 (538)
T ss_dssp SSHHHHHHHHHCSSEESEEEEECSCHHHHHHHH--HHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGG
T ss_pred CCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHH--HhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHh
Confidence 999999999999999999999999999999999 78999999999 554444678999999999999 99999999999
Q ss_pred hheeEEEEeCCCCCC
Q 010520 486 MRRSTCTINYGNELP 500 (508)
Q Consensus 486 ~~~k~v~~~~~~~~~ 500 (508)
++.|+|++++....+
T Consensus 507 t~~k~v~~~~~~~~~ 521 (538)
T 3qan_A 507 MQAKTVSEMYAENLY 521 (538)
T ss_dssp EEEEEEEEEC-----
T ss_pred hCeEEEEEecCCccc
Confidence 999999998865443
No 18
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=6.2e-102 Score=816.88 Aligned_cols=471 Identities=28% Similarity=0.503 Sum_probs=440.7
Q ss_pred CCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHh
Q 010520 17 SPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREK 94 (508)
Q Consensus 17 ~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
....+++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++
T Consensus 3 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 82 (479)
T 2imp_A 3 VPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRER 82 (479)
T ss_dssp CCEECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CCcccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 345667899999994 457899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHH
Q 010520 95 LHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 174 (508)
+++|+++++.|+|||+.+++.|+..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+.+.+++
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 83 ASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 99999999999999999999999999999999998877665544333223446678899999999999999999999999
Q ss_pred HHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHH
Q 010520 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (508)
Q Consensus 175 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (508)
+++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|+
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~----~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 238 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFA----KIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 238 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHH----HHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHH----HHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 999999999999999999999998775 456789999999999999 567899999999999999999999999999
Q ss_pred HHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCC
Q 010520 254 QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (508)
Q Consensus 254 ~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~ 333 (508)
+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 239 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 318 (479)
T 2imp_A 239 ATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA 318 (479)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHH
Q 010520 334 E-KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (508)
Q Consensus 334 ~-~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ 411 (508)
+ +++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ ++++++++++||+||||++|++|+|+|
T Consensus 319 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~ 398 (479)
T 2imp_A 319 ERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLE 398 (479)
T ss_dssp TCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHH
T ss_pred ccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHH
Confidence 9 99999999999999999999999999999999999764446999999987 799999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010520 412 EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 412 eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 399 eAi~~aN~~~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v 475 (479)
T 2imp_A 399 DAISMANDSDYGLTSSIYTQNLNVAMKAI--KGLKFGETYINRENFE-AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475 (479)
T ss_dssp HHHHHHHCSSEESEEEEECCCHHHHHHHH--HHCCSSEEEESSCCCC-CTTSCBCCEETTEESCBSHHHHHHTTEEEEEE
T ss_pred HHHHHHhcCCCCeeEEEECCCHHHHHHHH--HhCCEeEEEECCCCCC-CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEE
Confidence 99999999999999999999999999999 7899999999987654 56899999999999999999999999999999
Q ss_pred EEe
Q 010520 492 TIN 494 (508)
Q Consensus 492 ~~~ 494 (508)
+++
T Consensus 476 ~~~ 478 (479)
T 2imp_A 476 YLQ 478 (479)
T ss_dssp EEE
T ss_pred Eec
Confidence 874
No 19
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1.3e-101 Score=815.78 Aligned_cols=470 Identities=29% Similarity=0.510 Sum_probs=439.9
Q ss_pred CCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH---HhccCChhHHHHHHHHHHHHHHH
Q 010520 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK---IWMELPAPKRGEVVRQIGDALRE 93 (508)
Q Consensus 19 ~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~ 93 (508)
...++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++
T Consensus 19 ~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (501)
T 1bxs_A 19 KYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIER 98 (501)
T ss_dssp CCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred cccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHH
Confidence 3456899999994 367899999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhH
Q 010520 94 KLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (508)
Q Consensus 94 ~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 172 (508)
+.++|++++++|+|||+.++. .|+...++.+++++...+.+.+...+. ..+...+..++|+|||++|+|||||+.+.+
T Consensus 99 ~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 177 (501)
T 1bxs_A 99 DRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFL 177 (501)
T ss_dssp THHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHH
Confidence 999999999999999999875 799999999999998887765543332 234456788999999999999999999999
Q ss_pred HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHH
Q 010520 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (508)
Q Consensus 173 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (508)
+++++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.
T Consensus 178 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~----~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~ 253 (501)
T 1bxs_A 178 WKIGPALSCGNTVVVKPAEQTPLTALHMG----SLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKL 253 (501)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHH----HHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCeeeccCCCccHHHHHHHH----HHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 99999999999999999999999998764 557889999999999999 7889999999999999999999999999
Q ss_pred HHHHhh-hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccC
Q 010520 252 VQQTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (508)
Q Consensus 252 i~~~a~-~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g 330 (508)
|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 254 i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 333 (501)
T 1bxs_A 254 IKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLG 333 (501)
T ss_dssp HHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBS
T ss_pred HHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCC
Confidence 999999 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCC
Q 010520 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (508)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~ 409 (508)
||.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ ++++++.+++||+||||++|++|+|
T Consensus 334 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (501)
T 1bxs_A 334 NPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKS 413 (501)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred CCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCC
Confidence 999999999999999999999999999999999999999864456999999987 7899999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhee
Q 010520 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489 (508)
Q Consensus 410 ~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k 489 (508)
+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++|++.|
T Consensus 414 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K 490 (501)
T 1bxs_A 414 LDDVIKRANNTFYGLSAGIFTNDIDKAITVS--SALQSGTVWVNCYSV-VSAQCPFGGFKMSGNGRELGEYGFHEYTEVK 490 (501)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCCSEEEESCCCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred HHHHHHHHhcCCCCeeEEEEcCCHHHHHHHH--HhcCeeEEEECCCCC-CCCCCCCCCcCcCCcCccchHHHHHHhhCee
Confidence 9999999999999999999999999999999 789999999998654 3467999999999999999999999999999
Q ss_pred EEEEeCC
Q 010520 490 TCTINYG 496 (508)
Q Consensus 490 ~v~~~~~ 496 (508)
+|++++.
T Consensus 491 ~v~~~~~ 497 (501)
T 1bxs_A 491 TVTIKIS 497 (501)
T ss_dssp EEEEECS
T ss_pred EEEEccC
Confidence 9999864
No 20
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=6.6e-102 Score=819.27 Aligned_cols=469 Identities=27% Similarity=0.479 Sum_probs=439.4
Q ss_pred CCCCceecCEEec--CCCe-EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhH
Q 010520 19 ETPGCFVNGKWKA--HGPT-VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (508)
Q Consensus 19 ~~~~~~i~g~~~~--~~~~-~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
..+++||||+|+. ++.+ ++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 97 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERR 97 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 4567899999984 3567 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHH
Q 010520 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 175 (508)
++|+++++.|+|||+.+++.|+..+++.+++++...+...+...+.. ++...+..++|+|||++|+|||||+.+.++++
T Consensus 98 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 176 (503)
T 1a4s_A 98 DNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKC 176 (503)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHHH
Confidence 99999999999999999999999999999999988877655433322 33456788999999999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH
Q 010520 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (508)
++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| + +.++.|++||+||+|+||||+.+|+.|++
T Consensus 177 a~ALaaGN~VVlKps~~tp~ta~~l~----~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~ 251 (503)
T 1a4s_A 177 APALACGNAVVFKPSPMTPVTGVILA----EIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVME 251 (503)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHH----HHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHH----HHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999998774 557789999999999999 6 88999999999999999999999999999
Q ss_pred HhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCC
Q 010520 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 255 ~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.+
T Consensus 252 ~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 331 (503)
T 1a4s_A 252 MSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331 (503)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc--C----CCCceeccEEE-ecCCCCcccccccccceeEeEEe
Q 010520 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI--E----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~--~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~ 407 (508)
+++++||+++..+++++.+++++++++|+++++||... + ..|+|++|||+ +++++|++++||+||||++|++|
T Consensus 332 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 411 (503)
T 1a4s_A 332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPF 411 (503)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred cCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEec
Confidence 99999999999999999999999999999999999764 2 36999999987 78999999999999999999999
Q ss_pred CCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhh
Q 010520 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487 (508)
Q Consensus 408 ~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~ 487 (508)
+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++
T Consensus 412 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~f~~ 488 (503)
T 1a4s_A 412 DTEEEVLQRANNTTFGLASGVFTRDISRAHRVA--ANLEAGTCYINTYSI-SPVEVPFGGYKMSGFGRENGQATVDYYSQ 488 (503)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCSSEEEESCCCC-CCTTSCBCCSGGGEECCBSTTGGGGGSEE
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH--HHCceeEEEECCCCC-CCCCCCCCCcCCCCCCccchHHHHHHhcC
Confidence 999999999999999999999999999999999 789999999998654 44678999999999999999999999999
Q ss_pred eeEEEEeCC
Q 010520 488 RSTCTINYG 496 (508)
Q Consensus 488 ~k~v~~~~~ 496 (508)
.|+|+++++
T Consensus 489 ~k~v~~~~~ 497 (503)
T 1a4s_A 489 LKTVIVEMG 497 (503)
T ss_dssp EEEEEECCS
T ss_pred ceEEEEccC
Confidence 999998753
No 21
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.7e-102 Score=817.26 Aligned_cols=470 Identities=27% Similarity=0.459 Sum_probs=440.0
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhccCChhHHHHHHHHHHHHHHHhH
Q 010520 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKL 95 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
+.++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++ .|+.++.++|.++|+++++.|++++
T Consensus 8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~ 87 (495)
T 3b4w_A 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERK 87 (495)
T ss_dssp CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 346899999994 457899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHH
Q 010520 96 HHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (508)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 174 (508)
++|++++++|+|||+.+++ .|+...++.+++++...+.+.+...+.. .+...+..++|+|||++|+|||||+.+.+++
T Consensus 88 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 88 DLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTG-SYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEE-TTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 9999999999999999998 8999999999999988877665443321 2335678899999999999999999999999
Q ss_pred HHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH
Q 010520 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (508)
Q Consensus 175 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (508)
+++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+|+.+.++.|++||+||.|+||||+.+|+.|++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~----~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~ 242 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALA----EVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGR 242 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHH----HHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHH----HHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 999999999999999999999998774 5567899999999999998789999999999999999999999999999
Q ss_pred HhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCC
Q 010520 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 255 ~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.+
T Consensus 243 ~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 322 (495)
T 3b4w_A 243 RAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSD 322 (495)
T ss_dssp HHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTC
T ss_pred HhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHH
Q 010520 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ 411 (508)
+++++||+++.++++++.+++++++++|+++++||...+ ..|+|++|||+ ++++++++++||+||||++|++|+|+|
T Consensus 323 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 402 (495)
T 3b4w_A 323 PAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEE 402 (495)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHH
Confidence 999999999999999999999999999999999997643 36999999987 689999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010520 412 EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 412 eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++ ..+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 403 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v 478 (495)
T 3b4w_A 403 DAIAIANDSVYGLAGSVWTTDVPKGIKIS--QQIRTGTYGINWYA--FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSV 478 (495)
T ss_dssp HHHHHHHCSSCCSCCEEECSCHHHHHHHH--HHSCCSCCEESSCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEE
T ss_pred HHHHHHhcCCCCeEEEEECCCHHHHHHHH--HhCCEeEEEECCCC--CCCCCCCCCCCCCCcCccchHHHHHHhcceeEE
Confidence 99999999999999999999999999999 78999999999875 456899999999999999999999999999999
Q ss_pred EEeCCCC
Q 010520 492 TINYGNE 498 (508)
Q Consensus 492 ~~~~~~~ 498 (508)
+++++.+
T Consensus 479 ~~~~~~~ 485 (495)
T 3b4w_A 479 LLPMGYT 485 (495)
T ss_dssp ECCTTCC
T ss_pred EEccCcc
Confidence 9876543
No 22
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.6e-101 Score=814.41 Aligned_cols=465 Identities=24% Similarity=0.434 Sum_probs=431.6
Q ss_pred CCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHh
Q 010520 17 SPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREK 94 (508)
Q Consensus 17 ~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
+....++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++
T Consensus 22 m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (497)
T 3i44_A 22 MLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKR 101 (497)
T ss_dssp CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Confidence 334678999999984 456899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEE-EeecceEEEEeCCCCchhhhH
Q 010520 95 LHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLET-WNPLGVVGVITAFNFPCAVLG 172 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~ 172 (508)
.++|+++++.|+|||+.+++ .|+...++.+++++...+......... .+...+.. ++|+|||++|+|||||+.+.+
T Consensus 102 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (497)
T 3i44_A 102 SSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI--EGNEQAILHYDAIGVVGLITPWNWPMNQVT 179 (497)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS--TTCSSCEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc--CCceeEEEeecCceEEEEECCCcchHHHHH
Confidence 99999999999999999999 899999999999887765543221111 13335566 999999999999999999999
Q ss_pred HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHH
Q 010520 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (508)
Q Consensus 173 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (508)
+++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.
T Consensus 180 ~~~a~ALaaGN~VVlKps~~tp~t~~~l----~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~ 255 (497)
T 3i44_A 180 LKVIPALLAGCTMVLKPSEIAPLSAMLF----AEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKD 255 (497)
T ss_dssp HHHHHHHHHTCEEEEECCTTSCHHHHHH----HHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCcccHHHHHHH----HHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHH
Confidence 9999999999999999999999999876 5557899999999999999 7789999999999999999999999999
Q ss_pred HHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCC
Q 010520 252 VQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (508)
Q Consensus 252 i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 331 (508)
|++.++++++|+++|+|||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 256 i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (497)
T 3i44_A 256 ISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGP 334 (497)
T ss_dssp HHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred HHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCc-ccC--CCCceeccEEE-ecCCCCcccccccccceeEeEEe
Q 010520 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGS-VIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (508)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~-~~~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~ 407 (508)
|.++++++||+++..+++++.+++++++++|+++++||. ..+ ..|+|++|||+ ++++++++++||+||||++|++|
T Consensus 335 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 414 (497)
T 3i44_A 335 GHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPF 414 (497)
T ss_dssp TTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEec
Confidence 999999999999999999999999999999999999994 322 26999999988 79999999999999999999999
Q ss_pred CCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhh
Q 010520 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487 (508)
Q Consensus 408 ~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~ 487 (508)
+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||. ....+.+||||+|.||+|+++|.+++++|++
T Consensus 415 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a--~~l~aG~V~iN~--~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~ 490 (497)
T 3i44_A 415 NTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIA--AQVRSGMVEVNG--HELPGGSYFGGVKFSGRAREGGLWGIKEFLD 490 (497)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHH--HHSCCSEEEETT--CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEE
T ss_pred CCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHH--HhCCcCeEEECC--CCCCCCCCcCCcCcCcCCccchHHHHHHhcc
Confidence 999999999999999999999999999999999 789999999995 3345678999999999999999999999999
Q ss_pred eeEEE
Q 010520 488 RSTCT 492 (508)
Q Consensus 488 ~k~v~ 492 (508)
.|+|+
T Consensus 491 ~K~v~ 495 (497)
T 3i44_A 491 TKAIS 495 (497)
T ss_dssp EEEES
T ss_pred eeEEE
Confidence 99884
No 23
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1.3e-101 Score=815.67 Aligned_cols=469 Identities=29% Similarity=0.484 Sum_probs=438.8
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH---HhccCChhHHHHHHHHHHHHHHHh
Q 010520 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK---IWMELPAPKRGEVVRQIGDALREK 94 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 19 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 98 (500)
T 1o04_A 19 CNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERD 98 (500)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHH
Confidence 346899999994 467899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHH
Q 010520 95 LHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 173 (508)
.++|++++++|+|||+.++. .|+...++.++|++...+...+...+. .++...+..++|+|||++|+|||||+.+.++
T Consensus 99 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 177 (500)
T 1o04_A 99 RTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAW 177 (500)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHH
Confidence 99999999999999999875 699999999999998877665543332 2344567889999999999999999999999
Q ss_pred HHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHH
Q 010520 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (508)
Q Consensus 174 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (508)
++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|++||+||+|+||||+.+|+.|
T Consensus 178 ~~a~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i 253 (500)
T 1o04_A 178 KLGPALATGNVVVMKVAEQTPLTALYV----ANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVI 253 (500)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCccChHHHHHH----HHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999876 4557889999999999999 78899999999999999999999999999
Q ss_pred HHHhh-hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCC
Q 010520 253 QQTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (508)
Q Consensus 253 ~~~a~-~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 331 (508)
++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 254 ~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 333 (500)
T 1o04_A 254 QVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333 (500)
T ss_dssp HHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCC
T ss_pred HHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCC
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCH
Q 010520 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
|.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+
T Consensus 334 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 413 (500)
T 1o04_A 334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413 (500)
T ss_dssp TTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCH
Confidence 99999999999999999999999999999999999999864346999999987 78999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeE
Q 010520 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~ 490 (508)
||||+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 414 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~ 490 (500)
T 1o04_A 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLS--QALQAGTVWVNCYDV-FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKT 490 (500)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHCCSSEEEESCSSC-CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEE
T ss_pred HHHHHHHhcCCCCceEEEECCCHHHHHHHH--HhCCeeEEEECCCCC-CCCCCCCCCcCCCCCCccchHHHHHHhcceEE
Confidence 999999999999999999999999999999 789999999998654 34679999999999999999999999999999
Q ss_pred EEEeCC
Q 010520 491 CTINYG 496 (508)
Q Consensus 491 v~~~~~ 496 (508)
|++++.
T Consensus 491 v~~~~~ 496 (500)
T 1o04_A 491 VTVKVP 496 (500)
T ss_dssp EEEECS
T ss_pred EEEecC
Confidence 999864
No 24
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.4e-101 Score=813.97 Aligned_cols=475 Identities=27% Similarity=0.446 Sum_probs=429.9
Q ss_pred CCCCceecCEEe--cCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHH
Q 010520 19 ETPGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 19 ~~~~~~i~g~~~--~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
+..++||||+|+ .++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.+
T Consensus 11 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 90 (508)
T 3r64_A 11 DATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHRE 90 (508)
T ss_dssp CTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHH
Confidence 456799999999 356899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCC-CCCceeEEEEeecceEEEEeCCCCchhhhHHHH
Q 010520 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE-RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 175 (508)
+|+++++.|+|||..+++.|+..+++.+++++...+...+ ..+.. .++...+..++|+|||++|+|||||+.+.++++
T Consensus 91 ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 169 (508)
T 3r64_A 91 EIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSV 169 (508)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 9999999999999999999999999999999988776655 33322 234567889999999999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHH-HHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHH
Q 010520 176 CIALVCGNCVVWKGAPTTPLIT-IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~-~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (508)
++||++||+||+|||+.+|+++ ..+ .+++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|+
T Consensus 170 ~~ALaaGN~VVlKps~~tp~t~~~~l----~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~ 245 (508)
T 3r64_A 170 APALAVGNAVVIKPASDTPVTGGVIP----ARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVG 245 (508)
T ss_dssp HHHHHTTCEEEEECCTTCHHHHTHHH----HHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHH
T ss_pred HHHHhcCCEEEEECCCCChHHHHHHH----HHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHH
Confidence 9999999999999999999999 765 5668899999999999999 688999999999999999999999999999
Q ss_pred HHhhh--ccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCC
Q 010520 254 QTVHQ--RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (508)
Q Consensus 254 ~~a~~--~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 331 (508)
+.+++ +++|+++|+|||||+||++|||++.|++.|++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 246 ~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 325 (508)
T 3r64_A 246 ELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGD 325 (508)
T ss_dssp HHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSC
T ss_pred HHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 99998 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCH
Q 010520 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
|.++++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+ ++++++++++||+||||++|++|+|+
T Consensus 326 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 402 (508)
T 3r64_A 326 PSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDE 402 (508)
T ss_dssp TTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSH
T ss_pred CccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCH
Confidence 9999999999999999999999999999999999999975 6899999987 79999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeE
Q 010520 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~ 490 (508)
||||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 403 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~ 480 (508)
T 3r64_A 403 AHAAELANASDFGLSAAVWSKDIDRAAQFA--LQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRW 480 (508)
T ss_dssp HHHHHHHTSSSCCSCEEEECSCHHHHHHHH--TTSCSSEEEECC--------------------CCCHHHHHHHTEEEEE
T ss_pred HHHHHHHhCCCCCcEEEEEcCCHHHHHHHH--HhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEE
Confidence 999999999999999999999999999999 789999999999765456778999999999999999999999999999
Q ss_pred EEEeCCCCCCCcc
Q 010520 491 CTINYGNELPLAQ 503 (508)
Q Consensus 491 v~~~~~~~~~~~~ 503 (508)
|++++....+..+
T Consensus 481 v~~~~~~~~~~~~ 493 (508)
T 3r64_A 481 IGIKRSAENLYFQ 493 (508)
T ss_dssp EEEECCSTTCCCC
T ss_pred EEEecccchhcch
Confidence 9999887766433
No 25
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=7.2e-102 Score=820.00 Aligned_cols=469 Identities=28% Similarity=0.488 Sum_probs=440.5
Q ss_pred CCCCCCceecCEEe--cCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHh
Q 010520 17 SPETPGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREK 94 (508)
Q Consensus 17 ~~~~~~~~i~g~~~--~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
....+++||||+|+ .++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++
T Consensus 11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 90 (517)
T 3r31_A 11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRER 90 (517)
T ss_dssp TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHH
Confidence 34567899999998 3567999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhh----hcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhh
Q 010520 95 LHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQ----LNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAV 170 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 170 (508)
.++|+++++.|+|||..++ |+...++.+++++...+. +.+...+. .++. .+..++|+|||++|+|||||+.+
T Consensus 91 ~~ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P~~~ 166 (517)
T 3r31_A 91 NDALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYPQQI 166 (517)
T ss_dssp HHHHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCccccc-CCCc-ceEEEcCccEEEEECCCcchHHH
Confidence 9999999999999999998 999999999999988877 66554433 2344 78899999999999999999999
Q ss_pred hHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHH
Q 010520 171 LGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGL 250 (508)
Q Consensus 171 ~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~ 250 (508)
.++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.+.++.|++||+||.|+||||+.+|+
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l----~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~ 242 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKI----AEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGR 242 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHH----HHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCcccHHHHHHH----HHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHH
Confidence 999999999999999999999999999876 4557789999999999999888999999999999999999999999
Q ss_pred HHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccC
Q 010520 251 MVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (508)
Q Consensus 251 ~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g 330 (508)
.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 243 ~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 322 (517)
T 3r31_A 243 KVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG 322 (517)
T ss_dssp HHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceeccEEE-ecCCCCcccccccccceeEeEE
Q 010520 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMK 406 (508)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~---~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~ 406 (508)
||.++++++||+++.++++++.++|++++++|+++++||...+ .+|+|++|||+ ++++++++++||+||||++|++
T Consensus 323 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (517)
T 3r31_A 323 DPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLD 402 (517)
T ss_dssp CTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEE
T ss_pred CCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEE
Confidence 9999999999999999999999999999999999999993122 37999999987 7999999999999999999999
Q ss_pred eCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhh
Q 010520 407 FQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486 (508)
Q Consensus 407 ~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~ 486 (508)
|+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+.+. ..+.+||||+|.||+|+++|.+++++|+
T Consensus 403 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~ft 479 (517)
T 3r31_A 403 FDDEDEVLARANATEFGLAGGVFTADLARAHRVV--DGLEAGTLWINTYNL-CPVEIPFGGSKQSGFGRENSAAALEHYS 479 (517)
T ss_dssp ECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHH--HHSCCSEEEESSCCC-CCTTSCBCCEETTEECCBSTGGGGGGSE
T ss_pred eCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHH--HHCCcceEEECCCCC-CCCCCCcCCcCcCCCCcCchHHHHHHhh
Confidence 9999999999999999999999999999999999 789999999999653 4578999999999999999999999999
Q ss_pred heeEEEEeCC
Q 010520 487 RRSTCTINYG 496 (508)
Q Consensus 487 ~~k~v~~~~~ 496 (508)
+.|+|++++.
T Consensus 480 ~~K~v~~~~~ 489 (517)
T 3r31_A 480 ELKTVYVSTG 489 (517)
T ss_dssp EEEEEEECCC
T ss_pred ceEEEEEcCC
Confidence 9999999864
No 26
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=2.7e-101 Score=812.36 Aligned_cols=466 Identities=27% Similarity=0.445 Sum_probs=435.9
Q ss_pred CCceecCEEecC-CCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010520 21 PGCFVNGKWKAH-GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 21 ~~~~i~g~~~~~-~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
.++||||+|+.+ +.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+
T Consensus 24 ~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 103 (495)
T 1wnd_A 24 HKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFA 103 (495)
T ss_dssp CCEEETTEEECCCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred cCeEECCEEecCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568999999943 3789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhh-hHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHH
Q 010520 100 RLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (508)
Q Consensus 100 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 178 (508)
++++.|+|||+.+++. |+...++.+++++...+...++..+...++...+..++|+|||++|+|||||+.+.++++++|
T Consensus 104 ~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~A 183 (495)
T 1wnd_A 104 ELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPA 183 (495)
T ss_dssp HHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHH
Confidence 9999999999999987 999999999999988776654433322234456788999999999999999999999999999
Q ss_pred hhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhh
Q 010520 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (508)
Q Consensus 179 LaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (508)
|++||+||+|||+.+|+++..+++ ++.++ +|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|++.++
T Consensus 184 LaaGN~VVlKps~~tp~t~~~l~~----l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 258 (495)
T 1wnd_A 184 LAAGNCVVLKPSEITPLTALKLAE----LAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 258 (495)
T ss_dssp HHTTCEEEEECCTTCCHHHHHHHH----HHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHcCCeeEeeCCCCChHHHHHHHH----HHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 999999999999999999988754 56677 99999999999 7889999999999999999999999999999999
Q ss_pred hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCC
Q 010520 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337 (508)
Q Consensus 258 ~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~ 337 (508)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++
T Consensus 259 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 338 (495)
T 1wnd_A 259 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDEST 338 (495)
T ss_dssp GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTC
T ss_pred hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHCC-CeEeeCCc-ccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHH
Q 010520 338 LLGPLHTPESRKNFEKGIENIKSQG-GKILTGGS-VIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAV 414 (508)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~g-a~v~~gg~-~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 414 (508)
++||+++..+++++.+++++++++| +++++||. .. +.|+|++|||+ +++++|++++||+||||++|++|+|+||||
T Consensus 339 ~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 417 (495)
T 1wnd_A 339 ELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVV 417 (495)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred CccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHH
Confidence 9999999999999999999999999 99999997 53 36999999987 799999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEe
Q 010520 415 KINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 415 ~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 494 (508)
+++|+++|||+++|||+|.+++++++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 418 ~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 418 NWANDSQYGLASSVWTKDVGRAHRVS--ARLQYGCTWVNTHFM-LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHHSSSCCSEEEEECSBHHHHHHHH--HHCCSSEEEESCCCC-CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhcCCCCeeEEEECCCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 99999999999999999999999999 789999999998654 346799999999999999999999999999999886
Q ss_pred C
Q 010520 495 Y 495 (508)
Q Consensus 495 ~ 495 (508)
+
T Consensus 495 ~ 495 (495)
T 1wnd_A 495 H 495 (495)
T ss_dssp C
T ss_pred C
Confidence 4
No 27
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=2.4e-101 Score=812.58 Aligned_cols=476 Identities=26% Similarity=0.470 Sum_probs=441.2
Q ss_pred hhcCCCCCCCCceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHH
Q 010520 12 SEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDAL 91 (508)
Q Consensus 12 ~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l 91 (508)
+.|--.....++||||+|+.+..+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|
T Consensus 4 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l 83 (487)
T 2w8n_A 4 AGLSAALLRTDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLM 83 (487)
T ss_dssp ----CCCCCCSEEETTEEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred cccCccccccCeeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 33333334467899999995448899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhh
Q 010520 92 REKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVL 171 (508)
Q Consensus 92 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 171 (508)
+++.++|+++++.|+|||..+++.|+...++.+++++...+.+.+...+...++...+..++|+|||++|+|||||+.+.
T Consensus 84 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 163 (487)
T 2w8n_A 84 IQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMI 163 (487)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence 99999999999999999999999999999999999998887766554333233456678899999999999999999999
Q ss_pred HHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEec---C-ChhhHHHHHcCCCcCEEEEeCCHH
Q 010520 172 GWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFC---G-GAEIGQAIAKDPRISLVSFTGSTK 247 (508)
Q Consensus 172 ~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~---g-~~~~~~~L~~~~~v~~v~ftGs~~ 247 (508)
++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+ | +.+.++.|++||+||+|+||||+.
T Consensus 164 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~ 239 (487)
T 2w8n_A 164 TRKVGAALAAGCTVVVKPAEDTPFSALAL----AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTT 239 (487)
T ss_dssp HHHHHHHHHHTCEEEEECCTTCCHHHHHH----HHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHH
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHH----HHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHH
Confidence 99999999999999999999999999876 455688999999999999 8 778899999999999999999999
Q ss_pred HHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhh-
Q 010520 248 VGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ- 326 (508)
Q Consensus 248 ~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~- 326 (508)
+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++++
T Consensus 240 ~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 319 (487)
T 2w8n_A 240 TGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKN 319 (487)
T ss_dssp HHHHHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCc-eeccEEE-ecCCCCcccccccccceeEe
Q 010520 327 VKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN-FVQPTIV-EISPTADIVKEELFAPVLYV 404 (508)
Q Consensus 327 ~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~-~~~Ptv~-~~~~~~~~~~~E~fgPvl~v 404 (508)
+++|||.++++++||+++..+++++.+++++++++|+++++||... ..|+ |++|||+ ++++++++++||+||||++|
T Consensus 320 ~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v 398 (487)
T 2w8n_A 320 LRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPV 398 (487)
T ss_dssp CCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEE
T ss_pred cccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEE
Confidence 9999999999999999999999999999999999999999999763 3689 9999988 79999999999999999999
Q ss_pred EEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHH
Q 010520 405 MKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQ 484 (508)
Q Consensus 405 ~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~ 484 (508)
++|+|+||||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++
T Consensus 399 ~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~-~~~~PfGG~~~SG~G~~~G~~~l~~ 475 (487)
T 2w8n_A 399 IKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVA--EQLEVGMVGVNEGLIS-SVECPFGGVKQSGLGREGSKYGIDE 475 (487)
T ss_dssp EEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHH--HHSCSSEEEESCSCCC-CTTSCBCCSGGGEESCBSTTTGGGG
T ss_pred EEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHH--HhCCeeeEEEcCCCCC-CCCCCCCCCCCCCcCCCchHHHHHH
Confidence 999999999999999999999999999999999999 7899999999986654 4569999999999999999999999
Q ss_pred hhheeEEEEeC
Q 010520 485 YMRRSTCTINY 495 (508)
Q Consensus 485 ~~~~k~v~~~~ 495 (508)
|++.|+|++++
T Consensus 476 f~~~k~v~~~~ 486 (487)
T 2w8n_A 476 YLELKYVCYGG 486 (487)
T ss_dssp GEEEEEEEECC
T ss_pred hcCccEEEEec
Confidence 99999998753
No 28
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=8e-101 Score=810.20 Aligned_cols=471 Identities=27% Similarity=0.413 Sum_probs=420.1
Q ss_pred CCCCCceecCEEe--cCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhH
Q 010520 18 PETPGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (508)
Q Consensus 18 ~~~~~~~i~g~~~--~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
.+.+++||||+|+ .++++++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (485)
T 4dng_A 4 ETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENR 83 (485)
T ss_dssp GGCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 3456899999999 35689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCC-CCCceeEEEEeecceEEEEeCCCCchhhhHHH
Q 010520 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE-RPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (508)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 174 (508)
++|++++++|+|||+.+++.|+..+++.+++++...+.+.+...+.. .++...+..++|+|||++|+|||||+.+.+++
T Consensus 84 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 163 (485)
T 4dng_A 84 DDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRS 163 (485)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999998887766544432 23456788999999999999999999999999
Q ss_pred HHHHhhcCCEEEeeCCCCChhHH-HHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHH
Q 010520 175 ACIALVCGNCVVWKGAPTTPLIT-IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (508)
Q Consensus 175 l~~ALaaGN~VVlkps~~~~~~~-~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (508)
+++||++||+||+|||+.+|+++ ..+ .+++.++|+|+|++|+|+| +.+.++.|++||++|.|+||||+.+|+.|
T Consensus 164 ~~~ALaaGN~VVlKps~~tp~~~~~~l----~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i 239 (485)
T 4dng_A 164 IAPAIALGNSVVHKPDIQTAISGGTII----AKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI 239 (485)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHTHHH----HHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHH----HHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHH
Confidence 99999999999999999999999 765 6678899999999999999 55689999999999999999999999999
Q ss_pred HHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCC
Q 010520 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (508)
Q Consensus 253 ~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p 332 (508)
++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 240 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~ 319 (485)
T 4dng_A 240 GEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQ 319 (485)
T ss_dssp HHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHH
Q 010520 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (508)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~ 411 (508)
.++++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+ ++++++++++||+||||++|++|+|+|
T Consensus 320 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ 396 (485)
T 4dng_A 320 TDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQ 396 (485)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHH
T ss_pred CcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHH
Confidence 999999999999999999999999999999999999975 6999999988 799999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010520 412 EAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 412 eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
|||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 397 eAi~~an~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v 474 (485)
T 4dng_A 397 EAIDMANDTEYGLSSAVFTSDLEKGEKFA--LQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWI 474 (485)
T ss_dssp HHHHHHHCSSCCSEEEEECSCHHHHHHHH--TTSCSSEEEESCC----------------------CHHHHHHHEEEEEE
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHH--HhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEE
Confidence 99999999999999999999999999999 7899999999997655567899999999999999999999999999999
Q ss_pred EEeCCC
Q 010520 492 TINYGN 497 (508)
Q Consensus 492 ~~~~~~ 497 (508)
++++..
T Consensus 475 ~~~~~~ 480 (485)
T 4dng_A 475 SIQKQY 480 (485)
T ss_dssp EEEC--
T ss_pred EEecCC
Confidence 998753
No 29
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=4.4e-101 Score=812.62 Aligned_cols=478 Identities=26% Similarity=0.420 Sum_probs=441.9
Q ss_pred hhhcCCCCCCCCceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH-HhccCChhHHHHHHHHHHH
Q 010520 11 LSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-IWMELPAPKRGEVVRQIGD 89 (508)
Q Consensus 11 ~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~-~w~~~~~~~R~~~L~~~a~ 89 (508)
|+++.... .+++||||+|+.+..+++++||+||+++++++.++.+|+++++++|++|++ .|+.++.++|.++|+++++
T Consensus 10 ~~~~~~~~-~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~ 88 (501)
T 1uxt_A 10 IKEKGGVP-VYPSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAAD 88 (501)
T ss_dssp SEEETTEE-EECEECSSSEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHhcCCc-ccceeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHH
Confidence 33444333 567899999995448899999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCC--CC--CceeEEEEeecceEEEEeCCC
Q 010520 90 ALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE--RP--NHMMLETWNPLGVVGVITAFN 165 (508)
Q Consensus 90 ~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~P~GVv~~i~p~n 165 (508)
.|+++.++|+++++.|+|||..+++.|+..+++.+++++...+...+...+.. .. +...+..++|+|||++|+|||
T Consensus 89 ~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 168 (501)
T 1uxt_A 89 IIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFN 168 (501)
T ss_dssp HHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTT
T ss_pred HHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCc
Confidence 99999999999999999999999999999999999999998877755443322 12 235678899999999999999
Q ss_pred CchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCC
Q 010520 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGS 245 (508)
Q Consensus 166 ~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs 245 (508)
||+.+.++++++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+|+.+.++.|++||+||.|+||||
T Consensus 169 ~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~----~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS 244 (501)
T 1uxt_A 169 YPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAV----KALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGS 244 (501)
T ss_dssp STTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHH----HHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESC
T ss_pred cHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHH----HHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCc
Confidence 999999999999999999999999999999998774 5567899999999999994488999999999999999999
Q ss_pred HHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhh
Q 010520 246 TKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYK 325 (508)
Q Consensus 246 ~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~ 325 (508)
+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 245 ~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 322 (501)
T 1uxt_A 245 TEVGERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLS 322 (501)
T ss_dssp HHHHHHHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHH
Confidence 999999999987 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCC-ceeccEEE-ecC---CCCcccccccccc
Q 010520 326 QVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG-NFVQPTIV-EIS---PTADIVKEELFAP 400 (508)
Q Consensus 326 ~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g-~~~~Ptv~-~~~---~~~~~~~~E~fgP 400 (508)
++++|||.++++++||+++..+++++.+++++++++|+++++||.. .| +|++|||+ +++ ++|.+++||+|||
T Consensus 323 ~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGP 399 (501)
T 1uxt_A 323 SLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAP 399 (501)
T ss_dssp TCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSS
T ss_pred hccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCc
Confidence 9999999999999999999999999999999999999999999975 57 99999988 788 9999999999999
Q ss_pred eeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHH
Q 010520 401 VLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD 480 (508)
Q Consensus 401 vl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~ 480 (508)
|++|++|+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++....+.+||||+|.||+|+++|.+
T Consensus 400 Vl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~ 477 (501)
T 1uxt_A 400 VALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAV--RLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGY 477 (501)
T ss_dssp EEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHH--HHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTT
T ss_pred eEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHH--HhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHH
Confidence 9999999999999999999999999999999999999999 78999999999863334568999999999999999999
Q ss_pred HHHHhhheeEEEEeCCCCCC
Q 010520 481 SWKQYMRRSTCTINYGNELP 500 (508)
Q Consensus 481 ~~~~~~~~k~v~~~~~~~~~ 500 (508)
++++|++.|+|++++..+.+
T Consensus 478 ~l~~f~~~k~v~~~~~~~~~ 497 (501)
T 1uxt_A 478 AVEAVTAYKTIVFNYKGKGV 497 (501)
T ss_dssp THHHHEEEEEEEEECTTSSS
T ss_pred HHHHhCceeEEEEecCCCcc
Confidence 99999999999998755444
No 30
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2e-100 Score=808.22 Aligned_cols=472 Identities=29% Similarity=0.528 Sum_probs=443.1
Q ss_pred CCCCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHh
Q 010520 17 SPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREK 94 (508)
Q Consensus 17 ~~~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
+-..+++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++
T Consensus 3 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 82 (490)
T 2ve5_A 3 RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRER 82 (490)
T ss_dssp CSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Confidence 345678999999994 567999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhhh-hHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHH
Q 010520 95 LHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (508)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 173 (508)
.++|+++++.|+|||..+++. |+...++.+++++...+.+.+...+. ..+...+..++|+|||++|+|||||+.+.++
T Consensus 83 ~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~ 161 (490)
T 2ve5_A 83 NDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp HHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeeEeeccccEEEEECCCcchHHHHHH
Confidence 999999999999999999996 99999999999998887765543332 2345677889999999999999999999999
Q ss_pred HHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHH
Q 010520 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (508)
Q Consensus 174 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (508)
++++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|
T Consensus 162 ~~~~ALaaGN~vVlKps~~tp~t~~~l~----~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i 237 (490)
T 2ve5_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLA----EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKV 237 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHH----HHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcchHHHHHHH----HHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHH
Confidence 9999999999999999999999998775 456788999999999999 88999999999999999999999999999
Q ss_pred HHHh-hhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCC
Q 010520 253 QQTV-HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (508)
Q Consensus 253 ~~~a-~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 331 (508)
++.+ +++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 238 ~~~a~a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 317 (490)
T 2ve5_A 238 MASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGD 317 (490)
T ss_dssp HHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred HHhchhccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceeccEEE-ecCCCCcccccccccceeEeEE
Q 010520 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMK 406 (508)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~----~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~ 406 (508)
|.++++++||+++..+++++.+++++++++|+++++||...+ .+|+|++|||+ ++++++++++||+||||++|++
T Consensus 318 p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~ 397 (490)
T 2ve5_A 318 PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 397 (490)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEE
Confidence 999999999999999999999999999999999999998632 36999999988 7999999999999999999999
Q ss_pred eCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhh
Q 010520 407 FQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486 (508)
Q Consensus 407 ~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~ 486 (508)
|+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|+
T Consensus 398 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~-~~~~~pfGG~k~SG~G~~~G~~~~~~f~ 474 (490)
T 2ve5_A 398 YDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAI--HRLEAGICWINTWGE-SPAEMPVGGYKQSGVGRENGLTTLAHYT 474 (490)
T ss_dssp ESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCCSEEEESCCSC-CCTTSCBCCSGGGEESCBSHHHHHHTTE
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCcCCCCCCCCCCcchHHHHHHhh
Confidence 9999999999999999999999999999999999 789999999999654 3568999999999999999999999999
Q ss_pred heeEEEEeCC
Q 010520 487 RRSTCTINYG 496 (508)
Q Consensus 487 ~~k~v~~~~~ 496 (508)
+.|+|+++++
T Consensus 475 ~~k~v~~~~~ 484 (490)
T 2ve5_A 475 RIKSVQVELG 484 (490)
T ss_dssp EEEEEEEECS
T ss_pred eeEEEEEccC
Confidence 9999999875
No 31
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=1.8e-100 Score=804.95 Aligned_cols=465 Identities=25% Similarity=0.458 Sum_probs=434.2
Q ss_pred CCCCCceecCEEecCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010520 18 PETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 18 ~~~~~~~i~g~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
++++++||||+|+.+..+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++
T Consensus 2 ~~~~~~~i~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 81 (475)
T 1euh_A 2 TKQYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 81 (475)
T ss_dssp CCBCCEEETTEEECCSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CcccceeECCEEecCCCceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45678999999995444999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCC----cee-EEEEeecceEEEEeCCCCchhhhH
Q 010520 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPN----HMM-LETWNPLGVVGVITAFNFPCAVLG 172 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~~~~ 172 (508)
|+++++.|+|||+.+++.|+..+++.+++++...+...++..+...++ ... +..++|+|||++|+|||||+.+.+
T Consensus 82 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (475)
T 1euh_A 82 IGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAG 161 (475)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHH
Confidence 999999999999999999999999999999988776554432222233 355 788999999999999999999999
Q ss_pred HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHH
Q 010520 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (508)
Q Consensus 173 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (508)
+++++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||++|.|+||||+.+|+.
T Consensus 162 ~~~~~ALaaGN~vVlKps~~tp~t~~~l~----~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~ 237 (475)
T 1euh_A 162 SKIAPALIAGNVIAFKPPTQGSISGLLLA----EAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237 (475)
T ss_dssp HHHHHHHHTTCEEEEECCSTTHHHHHHHH----HHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEeCCCcChHHHHHHH----HHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHH
Confidence 99999999999999999999999998875 456789999999999999 4678999999999999999999999999
Q ss_pred HHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCC
Q 010520 252 VQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (508)
Q Consensus 252 i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 331 (508)
|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 238 i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 315 (475)
T 1euh_A 238 IGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN 315 (475)
T ss_dssp HHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSC
T ss_pred HHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 999987 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCH
Q 010520 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
|.+ ++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+ ++++++++++||+||||++|++|+|+
T Consensus 316 p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 391 (475)
T 1euh_A 316 PED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391 (475)
T ss_dssp GGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCH
T ss_pred ccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCH
Confidence 999 999999999999999999999999999999999975 5899999987 68999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcC-CCCCCCCCCCccCCCCCCCCCcchHHHHHHhhhee
Q 010520 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNI-PTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~-~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k 489 (508)
||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+ ++. ..+.+||||+|.||+|+++|.+++++|++.|
T Consensus 392 ~eai~~an~~~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~vN~~~~~-~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 468 (475)
T 1euh_A 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIA--EQLEVGTVHINNKTQR-GTDNFPFLGAKKSGAGIQGVKYSIEAMTTVK 468 (475)
T ss_dssp HHHHHHHHHSSEESEEEEECSCHHHHHHHH--HHSCSSEEEESSCCCC-CSTTSCBCCEETTEESCBSHHHHHHHTEEEE
T ss_pred HHHHHHHhCCCCCeeEEEEeCCHHHHHHHH--HhCCEeeEEECCCCCC-CCCCCCcCCCCCCCcCCCccHHHHHHhCCee
Confidence 999999999999999999999999999999 789999999998 554 3568999999999999999999999999999
Q ss_pred EEEEeC
Q 010520 490 TCTINY 495 (508)
Q Consensus 490 ~v~~~~ 495 (508)
+|++++
T Consensus 469 ~v~~~~ 474 (475)
T 1euh_A 469 SVVFDI 474 (475)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 998864
No 32
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.7e-100 Score=805.07 Aligned_cols=470 Identities=28% Similarity=0.473 Sum_probs=438.3
Q ss_pred CCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010520 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 20 ~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
++++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 84 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEE 84 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 367899999984 457899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHH
Q 010520 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 177 (508)
|++++++|+|||+.+++.|+..+++.+++++...+.+.+...+...++...+..++|+|||++|+|||||+.+.++++++
T Consensus 85 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 164 (486)
T 1t90_A 85 LAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPM 164 (486)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHH
Confidence 99999999999999999999999999999988777665543321123345678899999999999999999999999999
Q ss_pred HhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhh
Q 010520 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (508)
Q Consensus 178 ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (508)
||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+|+.+.++.|++||+||.|+||||+.+|+.|++.++
T Consensus 165 ALaaGN~VVlKps~~tp~t~~~l~----~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa 240 (486)
T 1t90_A 165 AIALGNTFILKPSERTPLLTEKLV----ELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240 (486)
T ss_dssp HHHTTCEEEEECCSSSCHHHHHHH----HHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCCChHHHHHHH----HHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh
Confidence 999999999999999999998774 5567899999999999997788999999999999999999999999999999
Q ss_pred hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCce-EEEecccHHHHHHHHHHhhhhcccCCCCCCC
Q 010520 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRR-LLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (508)
Q Consensus 258 ~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~-v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 336 (508)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ ||+|+++|+++++++++|+|.+++
T Consensus 241 ~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~ 319 (486)
T 1t90_A 241 ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDG 319 (486)
T ss_dssp HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccC
Confidence 999999999999999999999999999999999999999999999999 999999 999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHH
Q 010520 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAV 414 (508)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~-~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 414 (508)
+++||+++..+++++.+++++++++|+++++||...+ ..|+|++|||+ ++++++++++||+||||++|++|+|+||||
T Consensus 320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai 399 (486)
T 1t90_A 320 VFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAI 399 (486)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHH
Confidence 9999999999999999999999999999999997532 36999999987 689999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC--CcchHHHHHHhhheeEEE
Q 010520 415 KINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG--REAGSDSWKQYMRRSTCT 492 (508)
Q Consensus 415 ~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g--~~~g~~~~~~~~~~k~v~ 492 (508)
+++|+++|||+++|||+|.+++++++ .++++|+|+||++....++.+||||+|.||+| +++|.+|+++|++.|+|+
T Consensus 400 ~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~ 477 (486)
T 1t90_A 400 EIANKSEFANGACLFTSNSNAIRYFR--ENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVT 477 (486)
T ss_dssp HHHHHSSEESEEEEECCBHHHHHHHH--HHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEE
T ss_pred HHHhCCCCCeEEEEEcCCHHHHHHHH--HhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999 78999999999865544567899999999999 899999999999999999
Q ss_pred EeCC
Q 010520 493 INYG 496 (508)
Q Consensus 493 ~~~~ 496 (508)
++++
T Consensus 478 ~~~~ 481 (486)
T 1t90_A 478 ARYP 481 (486)
T ss_dssp EECC
T ss_pred EecC
Confidence 9864
No 33
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.3e-100 Score=805.06 Aligned_cols=454 Identities=25% Similarity=0.392 Sum_probs=428.9
Q ss_pred CeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhh
Q 010520 34 PTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG 113 (508)
Q Consensus 34 ~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 113 (508)
.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++
T Consensus 4 ~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 83 (484)
T 3ros_A 4 SKYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSES 83 (484)
T ss_dssp CCCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred CccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCC
Q 010520 114 IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTT 193 (508)
Q Consensus 114 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~ 193 (508)
+.|+...++.+++++...+...+...+.. .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus 84 ~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~t 162 (484)
T 3ros_A 84 KEEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNV 162 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCEEECC-TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeeccC-CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCC
Confidence 99999999999999988877665543332 34577889999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCe
Q 010520 194 PLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272 (508)
Q Consensus 194 ~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~ 272 (508)
|+++..+ .+++.++|+|+|++|+|+| +.+.++ |++||+||.|+||||+.+|+.|++.++++++|+++|+|||||
T Consensus 163 p~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p 237 (484)
T 3ros_A 163 PGSAALT----AKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDA 237 (484)
T ss_dssp HHHHHHH----HHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCE
T ss_pred hHHHHHH----HHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCc
Confidence 9999876 4556788999999999999 556677 999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHH
Q 010520 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFE 352 (508)
Q Consensus 273 ~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~ 352 (508)
+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++++||+++.++++++.
T Consensus 238 ~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~ 317 (484)
T 3ros_A 238 FIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLE 317 (484)
T ss_dssp EEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHH
T ss_pred ceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecC
Q 010520 353 KGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431 (508)
Q Consensus 353 ~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~ 431 (508)
+++++++++|+++++||...+..|+|++|||+ ++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 318 ~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~ 397 (484)
T 3ros_A 318 AQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGS 397 (484)
T ss_dssp HHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECS
T ss_pred HHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECC
Confidence 99999999999999999875678999999988 69999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeCC
Q 010520 432 SPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 432 d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|++++.
T Consensus 398 d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 398 DIDRAKKVS--AQIETGMTVINGRWI-TSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp CHHHHHHHH--HHSCSSCCEETSCCC-CCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred CHHHHHHHH--HhCccceEEECCCCC-CCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 999999999 789999999999643 45789999999999999999999999999999998764
No 34
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=6.3e-100 Score=807.27 Aligned_cols=469 Identities=27% Similarity=0.478 Sum_probs=436.4
Q ss_pred CCCCceecCEEecCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010520 19 ETPGCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 19 ~~~~~~i~g~~~~~~~~~~v~~P~-~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
..+++||||+|+.++.+++++||+ ||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++
T Consensus 36 ~~~~~~i~G~~~~~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (516)
T 1uzb_A 36 RHYPLYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRE 115 (516)
T ss_dssp EEECEEETTEEECCSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cccceeECCEEecCCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456899999999767889999999 6999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCccc-CCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHH
Q 010520 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP-SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 176 (508)
|+++++.|+|||+.+++.|+...++.+++++...+.+.+...+ ...++...+..++|+|||++|+|||||+.+.+++++
T Consensus 116 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 195 (516)
T 1uzb_A 116 LEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIV 195 (516)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHH
Confidence 9999999999999999999999999999999887776654322 222344567889999999999999999999999999
Q ss_pred HHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHH
Q 010520 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (508)
Q Consensus 177 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (508)
+||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|++||+||.|+||||+.+|+.|++.
T Consensus 196 ~ALaaGN~VVlKps~~tp~ta~~l~----~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~ 271 (516)
T 1uzb_A 196 GPVAVGNTVIAKPAEDAVVVGAKVF----EIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHTTCEEEEECCGGGHHHHHHHH----HHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCeEEEeCCCCCHHHHHHHH----HHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHH
Confidence 9999999999999999999998764 556789999999999999 78899999999999999999999999999999
Q ss_pred hh------hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhccc
Q 010520 256 VH------QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329 (508)
Q Consensus 256 a~------~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~ 329 (508)
++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 272 aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 351 (516)
T 1uzb_A 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred hhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence 98 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeC
Q 010520 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ 408 (508)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~ 408 (508)
|+| ++++++||+++..+++++.+++++++++| ++++||...+..|+|++|||+ +++++|++++||+||||++|++|+
T Consensus 352 G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 429 (516)
T 1uzb_A 352 GPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp SCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeC
Confidence 999 99999999999999999999999999888 899999763346999999987 799999999999999999999999
Q ss_pred CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCC-CCCCCCccCCCCCCCCC-cchHHHHHHhh
Q 010520 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNG-AEIGGAFGGEKATGGGR-EAGSDSWKQYM 486 (508)
Q Consensus 409 ~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~-~~~~~pfGG~~~SG~g~-~~g~~~~~~~~ 486 (508)
|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++.. ..+.+||||+|.||+|+ .+|.+++++|+
T Consensus 430 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~ 507 (516)
T 1uzb_A 430 DFAEALEVANDTPYGLTGGVYSRKREHLEWAR--REFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFL 507 (516)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHH--HHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHH--HhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcC
Confidence 99999999999999999999999999999999 7899999999986543 34578999999999995 68999999999
Q ss_pred heeEEEEeC
Q 010520 487 RRSTCTINY 495 (508)
Q Consensus 487 ~~k~v~~~~ 495 (508)
+.|+|++++
T Consensus 508 ~~k~v~~~~ 516 (516)
T 1uzb_A 508 EMKAVAERF 516 (516)
T ss_dssp EEEEEEEEC
T ss_pred CeeEEEecC
Confidence 999998864
No 35
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=2.9e-99 Score=796.90 Aligned_cols=461 Identities=26% Similarity=0.456 Sum_probs=411.5
Q ss_pred CCCCceecCEEec--CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHH
Q 010520 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 19 ~~~~~~i~g~~~~--~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
...++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.+
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 85 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKD 85 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4567999999984 66799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhh-hhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHH
Q 010520 97 HLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 175 (508)
+|+++++.|+|||..++ +.|+...++.+++++...+...+... ....+..++|+|||++|+|||||+.+.++++
T Consensus 86 ~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 160 (478)
T 3ty7_A 86 DIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKL 160 (478)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHH
Confidence 99999999999999999 68999999999999988776654321 2346778999999999999999999999999
Q ss_pred HHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHH
Q 010520 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (508)
Q Consensus 176 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (508)
++||++||+||+|||+.+|+++..++ +++.++|+|+|++|+|+| +.+.++.|+.||+||.|+||||+.+|+.|++
T Consensus 161 ~~ALaaGN~VVlKps~~tp~t~~~l~----~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~ 236 (478)
T 3ty7_A 161 AAAFAAGSPVVLKPSEETPFAAVILA----EIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIME 236 (478)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHH----HHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--C
T ss_pred HHHHHcCCeEEEECCCcchHHHHHHH----HHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999998764 556788999999999999 7789999999999999999999999999999
Q ss_pred HhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCC
Q 010520 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 255 ~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.+
T Consensus 237 ~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 316 (478)
T 3ty7_A 237 KAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPRE 316 (478)
T ss_dssp STTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcc-cC--CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCH
Q 010520 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV-IE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~-~~--~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~ 410 (508)
+++++||+++.++++++.+++++++++|+++++||.. .+ ..|+|++|||+ ++++++++++||+||||++|++|+|+
T Consensus 317 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 396 (478)
T 3ty7_A 317 DGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDL 396 (478)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCH
Confidence 9999999999999999999999999999999999943 22 47999999987 79999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeE
Q 010520 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490 (508)
Q Consensus 411 ~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~ 490 (508)
||||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+ ....+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 397 ~eAi~~an~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~vN~--~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~ 472 (478)
T 3ty7_A 397 DEAIQIANDTKYGLAGYVIGKDKETLHKVA--RSIEAGTVEINE--AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKS 472 (478)
T ss_dssp HHHHHHHTCSSCCSEEEEECSCHHHHHHHH--HHSCSSEEEETT--CC----------------------CCGGGEEEEE
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHH--HhCCcCeEEECC--CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEE
Confidence 999999999999999999999999999999 789999999999 3345678999999999999999999999999999
Q ss_pred EE
Q 010520 491 CT 492 (508)
Q Consensus 491 v~ 492 (508)
|+
T Consensus 473 v~ 474 (478)
T 3ty7_A 473 IA 474 (478)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 36
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=9e-99 Score=801.38 Aligned_cols=482 Identities=24% Similarity=0.360 Sum_probs=440.7
Q ss_pred hhhhhcCCCCCCCCceecCEEecCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHH
Q 010520 9 EFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQI 87 (508)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~ 87 (508)
++|.++.....++++||||+|+.++..+.++||+| ++++++++.++.+|+++|+++|++|++.|+.++.++|.++|+++
T Consensus 52 ~a~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~ 131 (563)
T 4e3x_A 52 KALKDLKGQTEAIPCVVGDEEVWTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKA 131 (563)
T ss_dssp HHHHTTTTCCEECCEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHhCCccCCeEECCEEeecCCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 45666766677899999999997777888999998 78999999999999999999999999999999999999999999
Q ss_pred HHHHHHh-HHHHHHHHHHHhCCChhhhhhh-HHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCC
Q 010520 88 GDALREK-LHHLGRLLSIEMGKILPEGIGE-VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFN 165 (508)
Q Consensus 88 a~~l~~~-~~~la~~~~~e~Gk~~~~a~~e-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n 165 (508)
+++|+++ +++|+.+++.|+|||+.+++.+ +..+++.+++++...+.+.+.......++...+.++.|+|||++|+|||
T Consensus 132 a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwN 211 (563)
T 4e3x_A 132 ADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFN 211 (563)
T ss_dssp HHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSS
T ss_pred HHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCch
Confidence 9999999 9999999999999999999876 9999999999999887776543222222233455666789999999999
Q ss_pred CchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeC
Q 010520 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244 (508)
Q Consensus 166 ~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftG 244 (508)
||+....+++++|| +||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+| +.+.++.|++||+|++|+|||
T Consensus 212 fP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l----~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTG 286 (563)
T 4e3x_A 212 FTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAV----YRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTG 286 (563)
T ss_dssp CHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEES
T ss_pred HHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHH----HHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEEC
Confidence 99999999999999 59999999999999999876 5567889999999999999 677899999999999999999
Q ss_pred CHHHHHHHHHHhhhccCc------eeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHH
Q 010520 245 STKVGLMVQQTVHQRFGK------CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318 (508)
Q Consensus 245 s~~~g~~i~~~a~~~~~~------~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~ 318 (508)
|+.+|+.|++.++++++| +++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|++
T Consensus 287 St~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~ 366 (563)
T 4e3x_A 287 SVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKG 366 (563)
T ss_dssp CHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHH
Confidence 999999999999998884 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcccCCC-CCCCCccCCCCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCCCCceeccEEE-ecCCCCccccc
Q 010520 319 QLVDVYKQVKIGDP-LEKGTLLGPLHTPESRKNFEKGIENIKS-QGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKE 395 (508)
Q Consensus 319 ~L~~~~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~v~~a~~-~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~ 395 (508)
+|+++++++++||| .|+++++||+++..+++++.++|+++++ .|+++++||...+..|+|++|||+ ++++++.+++|
T Consensus 367 ~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~e 446 (563)
T 4e3x_A 367 RLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKE 446 (563)
T ss_dssp HHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTS
T ss_pred HHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcC
Confidence 99999999999999 9999999999999999999999999996 799999999876668999999987 79999999999
Q ss_pred ccccceeEeEEeCC--HHHHHHHh-ccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCC-CCCCCccCCCCC
Q 010520 396 ELFAPVLYVMKFQT--FEEAVKIN-NSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGA-EIGGAFGGEKAT 471 (508)
Q Consensus 396 E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfGG~~~S 471 (508)
|+||||++|++|+| +||||+++ |+++|||+++|||+|.+.+++++++.++++|+|+||+.++.. ...+||||+|.|
T Consensus 447 EiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~S 526 (563)
T 4e3x_A 447 EIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARAS 526 (563)
T ss_dssp CCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETT
T ss_pred CCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCcccc
Confidence 99999999999986 79999999 799999999999999999999984333459999999975443 456899999999
Q ss_pred CCC-CcchHHHHHHhhheeEEEEeC
Q 010520 472 GGG-REAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 472 G~g-~~~g~~~~~~~~~~k~v~~~~ 495 (508)
|+| +.+|++++++|++.|+|..++
T Consensus 527 G~g~~~~G~~~l~~~~~~k~v~~~~ 551 (563)
T 4e3x_A 527 GTNDKPGGPHYILRWTSPQVIKETH 551 (563)
T ss_dssp BCCCCTTSTTGGGGGBCCEEEEEEC
T ss_pred CCCCccCCHHHHHHhCceEEEEEeC
Confidence 998 889999999999999999986
No 37
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=3e-98 Score=786.54 Aligned_cols=455 Identities=27% Similarity=0.446 Sum_probs=429.9
Q ss_pred CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChh
Q 010520 32 HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP 111 (508)
Q Consensus 32 ~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 111 (508)
+..+++++||+||+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCC
Q 010520 112 EGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (508)
Q Consensus 112 ~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 191 (508)
+++.|+..+++.+++++...+...+.. +...++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 85 ~a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~ 163 (462)
T 3etf_A 85 QARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAP 163 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCC
Confidence 999999999999999998877665543 2223345678899999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccC
Q 010520 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271 (508)
Q Consensus 192 ~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~ 271 (508)
.+|+++..+ .+++.++|+|+|++|+|+|+.+.+..|++||+++.|+||||+.+|+.|++.++++++|+++|+||||
T Consensus 164 ~tp~~~~~l----~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~ 239 (462)
T 3etf_A 164 NVTGCAQMI----ARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSD 239 (462)
T ss_dssp TCHHHHHHH----HHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCE
T ss_pred CCcHHHHHH----HHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCC
Confidence 999999876 5567899999999999999888889999999999999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHH
Q 010520 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351 (508)
Q Consensus 272 ~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 351 (508)
|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEec
Q 010520 352 EKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (508)
Q Consensus 352 ~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s 430 (508)
.+++++++++|+++++||...+..|+|++|||+ ++++++++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t 399 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEEC
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEEC
Confidence 999999999999999999865678999999988 7999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEe
Q 010520 431 RSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 431 ~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 494 (508)
+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 400 ~d~~~a~~~~--~~l~aG~v~vN~~~~-~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 400 ADDTLAAEMA--ARLECGGVFINGYSA-SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKN 460 (462)
T ss_dssp SCHHHHHHHH--HHCCSSEEEESSCCC-CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEC
T ss_pred CCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEe
Confidence 9999999999 789999999999653 456789999999999999999999999999999875
No 38
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.9e-97 Score=781.08 Aligned_cols=462 Identities=27% Similarity=0.443 Sum_probs=431.9
Q ss_pred CCceecCEEec-CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010520 21 PGCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 21 ~~~~i~g~~~~-~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
.++||||+|+. .+.++.++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+
T Consensus 6 ~~~~I~G~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 85 (490)
T 3ju8_A 6 STHYIAGQWLAGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA 85 (490)
T ss_dssp CCEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred cCceECCEEecCCCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999994 45689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHh
Q 010520 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (508)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 179 (508)
++++.|+|||..+++.|+...++.+++++...+...+...+.. .+...+..++|+|||++|+|||||+.+.++++++||
T Consensus 86 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 164 (490)
T 3ju8_A 86 RVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPL-ADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPAL 164 (490)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEE-TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHH
Confidence 9999999999999999999999999999888776655433211 233456679999999999999999999999999999
Q ss_pred hcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhc
Q 010520 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (508)
Q Consensus 180 aaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (508)
++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.+.++.|++||+||+|+||||+.+|+.|++.++++
T Consensus 165 aaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~ 240 (490)
T 3ju8_A 165 LAGNCVVFKPSELTPKVAELT----LKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQ 240 (490)
T ss_dssp HHTCEEEEECCTTCHHHHHHH----HHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTC
T ss_pred HcCCeEEEECCCCCcHHHHHH----HHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhcc
Confidence 999999999999999999876 4567889999999999999889999999999999999999999999999999999
Q ss_pred cCce-eeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEeccc-HHHHHHHHHHhhhhcccCC-CCCCC
Q 010520 260 FGKC-LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESI-YQTVLDQLVDVYKQVKIGD-PLEKG 336 (508)
Q Consensus 260 ~~~~-~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~L~~~~~~~~~g~-p~~~~ 336 (508)
++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |.+++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 9998 7999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHH
Q 010520 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKI 416 (508)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 416 (508)
+++||+++.++++++.+++++++++|+++++||...+.+|+|++|||+.+++++++++||+||||++|++|+|+||||++
T Consensus 321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~ 400 (490)
T 3ju8_A 321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIRE 400 (490)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEECTTCSSCCCCCCCSSEEEEEEESSHHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEEeCCCCccccccccccEEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999987667899999998888899999999999999999999999999999
Q ss_pred hccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010520 417 NNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 417 ~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
+|+++|||+++|||+|.+++++++ .++++|+|+||+++.+..+.+||||+|.||++ ++++|++.|+|++..
T Consensus 401 aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 401 ANATQYGLAAGLLSDSRERFEQFL--VESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp HHCSSCCSEEEEECSCHHHHHHHH--HHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred HhcCCCCceEEEEcCCHHHHHHHH--HhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 999999999999999999999999 78999999999977656678999999999975 478999999998876
No 39
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=4.1e-96 Score=771.61 Aligned_cols=460 Identities=24% Similarity=0.378 Sum_probs=424.8
Q ss_pred CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChh
Q 010520 32 HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP 111 (508)
Q Consensus 32 ~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 111 (508)
+.++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+||+.
T Consensus 4 ~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 82 (474)
T 4h7n_A 4 MTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS- 82 (474)
T ss_dssp CCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-
T ss_pred CCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhhcC-CcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCC
Q 010520 112 EGIGEVQEVIDMCDFAVGLSRQLNG-SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 190 (508)
Q Consensus 112 ~a~~ev~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps 190 (508)
++..|+...++.+++++........ .......+.......++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 83 ~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps 162 (474)
T 4h7n_A 83 ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS 162 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence 4567999999999988877655433 222333344556677899999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCcc
Q 010520 191 PTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGN 270 (508)
Q Consensus 191 ~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~ 270 (508)
+.+|.++..+ .+++.++|+|+|++|+++|+.+.+..|+.| ++.|+||||+.+|+.|++.++++++|+++|+|||
T Consensus 163 ~~tp~~~~~l----~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk 236 (474)
T 4h7n_A 163 EIAPRFVAPL----LMALNTVPELRDVLIFVEGGGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELGGK 236 (474)
T ss_dssp TTSCTTHHHH----HHHHTTCTTTTTTEEECCCCHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCC
T ss_pred ccCchHHHHH----Hhhhhhhcccccceeeccccchhhhhhhhc--cceEEeccccchhhhhhhhhhcccccccccCCCc
Confidence 9999998766 456789999999999999988999999976 8999999999999999999999999999999999
Q ss_pred CeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHH
Q 010520 271 NAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKN 350 (508)
Q Consensus 271 ~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 350 (508)
||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+.++
T Consensus 237 ~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 316 (474)
T 4h7n_A 237 DPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGI 316 (474)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHH
T ss_pred CccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCeEeeCCcccC-CCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEE
Q 010520 351 FEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428 (508)
Q Consensus 351 ~~~~v~~a~~~ga~v~~gg~~~~-~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si 428 (508)
+.+++++++++|+++++||...+ .+|+|++|||+ ++++++++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 317 v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v 396 (474)
T 4h7n_A 317 INDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAV 396 (474)
T ss_dssp HHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEE
T ss_pred HHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEE
Confidence 99999999999999999998643 57899999988 79999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHhhcccCcceeEEEEcCCCCCC-CCCCCccCCCCCCCC-CcchHHHHHHhhheeEEEEeCC-CCCC
Q 010520 429 FTRSPENIFKWLGPHGSDTGIVNVNIPTNGA-EIGGAFGGEKATGGG-REAGSDSWKQYMRRSTCTINYG-NELP 500 (508)
Q Consensus 429 ~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfGG~~~SG~g-~~~g~~~~~~~~~~k~v~~~~~-~~~~ 500 (508)
||+|.+++++++ .++++|+|+||+.+... .+..||||+|.||+| +++|.+|+++|++.|+|+++.. .+.|
T Consensus 397 ~t~d~~~a~~~a--~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p 469 (474)
T 4h7n_A 397 FAGSEDEALKVA--RQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDP 469 (474)
T ss_dssp ECSSHHHHHHHH--TTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCT
T ss_pred EeCCHHHHHHHH--HhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCC
Confidence 999999999999 88999999999865433 456899999999998 7899999999999999999864 4455
No 40
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=1e-95 Score=817.79 Aligned_cols=472 Identities=30% Similarity=0.497 Sum_probs=441.8
Q ss_pred CCCCCceecCEEecCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHH
Q 010520 18 PETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (508)
Q Consensus 18 ~~~~~~~i~g~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (508)
...+++||||+|+.++.+++++||+| ++++++++.++.+++++|+++|++|++.|+.+|.++|.++|+++++.|+++++
T Consensus 529 ~~~~~~~I~G~~~~~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~ 608 (1026)
T 4f9i_A 529 GKTYPLFINGKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLF 608 (1026)
T ss_dssp CEEECEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccccCceECCEEecCCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45788999999998888999999998 88999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHH
Q 010520 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (508)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 176 (508)
+|+++++.|+|||..+++.|+..+++.++|++...+.+.+.......++...+..++|+|||++|+|||||+.+.+++++
T Consensus 609 eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a 688 (1026)
T 4f9i_A 609 ELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMAS 688 (1026)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999988877654433323455667789999999999999999999999999
Q ss_pred HHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHH
Q 010520 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (508)
Q Consensus 177 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (508)
+||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.
T Consensus 689 ~ALaaGNtVVlKPse~tplsa~~l----~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~ 764 (1026)
T 4f9i_A 689 AAIVTGNCVVFKPSGITSIIGWHL----VELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIER 764 (1026)
T ss_dssp HHHHTTCEEEEECCGGGHHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCEEEEEcCccchHHHHHH----HHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHH
Confidence 999999999999999999999876 5567889999999999999 67899999999999999999999999999999
Q ss_pred hh------hccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhccc
Q 010520 256 VH------QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329 (508)
Q Consensus 256 a~------~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~ 329 (508)
++ ++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|+++++||||+++||+|+++|+++++++++
T Consensus 765 aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 765 AAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred hhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 88 467999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeC
Q 010520 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ 408 (508)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~ 408 (508)
|+|.++++++||+++..+++++.++|++++++| ++++||...+..|+|++|||+ ++++++.+++||+||||++|++|+
T Consensus 845 G~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 923 (1026)
T 4f9i_A 845 GPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923 (1026)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeC
Confidence 999999999999999999999999999999998 999999764445999999988 599999999999999999999999
Q ss_pred CHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCC-CCCCCccCCCCCCCCC-cchHHHHHHhh
Q 010520 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGA-EIGGAFGGEKATGGGR-EAGSDSWKQYM 486 (508)
Q Consensus 409 ~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfGG~~~SG~g~-~~g~~~~~~~~ 486 (508)
|+||||+++|+++|||+++|||+|.+.+++++ .++++|+|+||+.+.+. ...+||||+|.||+|+ .+|++++++|+
T Consensus 924 d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~--~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~ 1001 (1026)
T 4f9i_A 924 DFDQAIEWANSTQFALTGGIFSRSPEHLAKAR--REFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFM 1001 (1026)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECCCHHHHHHHH--HHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGE
T ss_pred CHHHHHHHHHcCCCCCeEEEECCCHHHHHHHH--HhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhc
Confidence 99999999999999999999999999999999 78999999999976544 3568999999999995 57899999999
Q ss_pred heeEEEEeCC
Q 010520 487 RRSTCTINYG 496 (508)
Q Consensus 487 ~~k~v~~~~~ 496 (508)
+.|+|++++.
T Consensus 1002 ~~k~v~~~~~ 1011 (1026)
T 4f9i_A 1002 DPRVVTENTM 1011 (1026)
T ss_dssp EEEEEEEECC
T ss_pred eEEEEEEecc
Confidence 9999999875
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=2.8e-94 Score=767.67 Aligned_cols=464 Identities=22% Similarity=0.304 Sum_probs=415.7
Q ss_pred CCCceecCEEec-CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHH-hHHhccCChhHHHHHHHHHHHHHHHhHHH
Q 010520 20 TPGCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-SKIWMELPAPKRGEVVRQIGDALREKLHH 97 (508)
Q Consensus 20 ~~~~~i~g~~~~-~~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
++++||||+|+. ++.+++++||+||+++++++.++ +|+++++++|++| |+.|+.++.++|.++|+++++.|++++++
T Consensus 7 ~~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 7 LLKNHVAGQWIAGTGAGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp ECCEEETTEEECCSSSCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhhEECCEEecCCCCeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 367899999983 34679999999999999999998 9999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhhcCC-------cccCCCCCc-eeEEEEeec-ceEEEEeCCCCch
Q 010520 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGS-------VIPSERPNH-MMLETWNPL-GVVGVITAFNFPC 168 (508)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~P~-GVv~~i~p~n~P~ 168 (508)
|++++++|+|||+.+++.|+...++.+++++...+.+.+. ..+...++. ..+..++|+ |||++|+|||||+
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~ 165 (534)
T 2y53_A 86 YYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPS 165 (534)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHH
Confidence 9999999999999999989999999999998877665321 112111222 346788997 9999999999999
Q ss_pred hhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCC-CCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCH
Q 010520 169 AVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK-LPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGST 246 (508)
Q Consensus 169 ~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aG-lP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~ 246 (508)
.++++++++||++||+||+|||+.+|+++..++ +++.++| +|+|++|+|+| +.+.++. .+++|+|+||||+
T Consensus 166 ~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~----~l~~~aG~lP~gvv~vv~g~~~~l~~~---l~~vd~V~FTGS~ 238 (534)
T 2y53_A 166 WGLWEKAAPALLSGVPVIVKPATATAWLTQRMV----ADVVDAGILPPGALSIICGSSAGLLDQ---IRSFDVVSFTGSA 238 (534)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHH----HHHHHHTCSCTTSEEECCSCCTTSGGG---CCTTCEEEEESCH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHH----HHHHHhCCCCCCeEEEEeCChHHHHhc---ccccCEEEEECCH
Confidence 999999999999999999999999999998764 5567899 79999999998 4333332 2679999999999
Q ss_pred HHHHHHHHHhh--hccCceeeccCccCeEEEcCCC-----CHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHH
Q 010520 247 KVGLMVQQTVH--QRFGKCLLELSGNNAIIIMDDA-----DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319 (508)
Q Consensus 247 ~~g~~i~~~a~--~~~~~~~~elgG~~~~iV~~da-----Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~ 319 (508)
.+|+.|++.++ ++++|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++||+|+++
T Consensus 239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 99999998875 7899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-----C-CCCceeccEEE-ecCCC--C
Q 010520 320 LVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI-----E-SEGNFVQPTIV-EISPT--A 390 (508)
Q Consensus 320 L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~-----~-~~g~~~~Ptv~-~~~~~--~ 390 (508)
|+++++++++|||.++++++||+++..+++++.++|+++ .+|+++++||... + ..|+|++|||+ +++++ +
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 999999999999999999999999999999999999999 6899999999742 1 36999999987 67766 6
Q ss_pred cccccccccceeEeEEeC---CH-----HHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCc--ceeEEEEcCCCC---
Q 010520 391 DIVKEELFAPVLYVMKFQ---TF-----EEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGS--DTGIVNVNIPTN--- 457 (508)
Q Consensus 391 ~~~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~--~~g~V~iN~~~~--- 457 (508)
.+++||+||||++|++|+ |+ ||||+++|+++|||+++|||+|.+++++++ .++ ++|+|+||+++.
T Consensus 398 ~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~~aG~V~vN~~~~~~~ 475 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLA--LELADSHGRVHAISPSVQHS 475 (534)
T ss_dssp STTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHH--HHHTTTEEEEEEECGGGTTT
T ss_pred HHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH--HHHHhhCCEEEEcCCccccc
Confidence 899999999999999999 99 999999999999999999999999999999 778 899999998532
Q ss_pred -----CCCCCCCccCCCCCCCCCc-chHHHHHHhhheeEEEEe
Q 010520 458 -----GAEIGGAFGGEKATGGGRE-AGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 458 -----~~~~~~pfGG~~~SG~g~~-~g~~~~~~~~~~k~v~~~ 494 (508)
...+.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus 476 ~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 476 QTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp CCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred ccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 1245789999999999999 699999999999998763
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=2.6e-93 Score=747.00 Aligned_cols=444 Identities=21% Similarity=0.275 Sum_probs=393.5
Q ss_pred CCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhh
Q 010520 33 GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE 112 (508)
Q Consensus 33 ~~~~~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 112 (508)
-..+++.||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 5 ~~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 84 (457)
T 3lns_A 5 HHHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDV 84 (457)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHH
T ss_pred cccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-hhHHHHHHHHHHHhhhhhhhcCC-cccC--CCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEee
Q 010520 113 GI-GEVQEVIDMCDFAVGLSRQLNGS-VIPS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 188 (508)
Q Consensus 113 a~-~ev~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlk 188 (508)
++ .|+...++.+++++...+..... .... ...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 85 a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlK 164 (457)
T 3lns_A 85 VDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIK 164 (457)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEE
Confidence 98 59999999999998877654332 1111 11234677899999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccC
Q 010520 189 GAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS 268 (508)
Q Consensus 189 ps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elg 268 (508)
||+.+|+++..+++++ .++ +|+|++|+|+|+.+.+..|++ ++||.|+||||+.+|+.|++.++++++|+++|+|
T Consensus 165 ps~~tp~t~~~l~~l~----~~a-lP~gvv~vv~g~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElG 238 (457)
T 3lns_A 165 PSETTPETSAVIEKII----AEA-FAPEYVAVIQGGRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELG 238 (457)
T ss_dssp CCTTCHHHHHHHHHHH----HHH-CCTTTEEECCCCHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECC
T ss_pred CCCCChHHHHHHHHHH----HHh-CCHhhEEEecCCHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECC
Confidence 9999999999886665 445 999999999998889999998 7999999999999999999999999999999999
Q ss_pred ccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHH
Q 010520 269 GNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESR 348 (508)
Q Consensus 269 G~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~ 348 (508)
||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++||+++.+++
T Consensus 239 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~ 313 (457)
T 3lns_A 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQV 313 (457)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHH
T ss_pred CCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987 6665 99999999999
Q ss_pred HHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhcc-CCCCcEE
Q 010520 349 KNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS-VPQGLSS 426 (508)
Q Consensus 349 ~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~ 426 (508)
+++.++++++ ++++++||.. +.+|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+ ++|||++
T Consensus 314 ~rv~~~i~~a---~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a 389 (457)
T 3lns_A 314 QRLVSLLEAT---QGQVLVGSQA-DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAV 389 (457)
T ss_dssp HHHHHHHHHC---CSEEEECCCE-EGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEE
T ss_pred HHHHHHHHhc---CCeEEeCCcc-CCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEE
Confidence 9999999985 3699999976 347999999987 78999999999999999999999999999999999 9999999
Q ss_pred EEecCCHHHHHHhhcccCcceeEEEEcCCCC-CCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEE
Q 010520 427 SIFTRSPENIFKWLGPHGSDTGIVNVNIPTN-GAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTI 493 (508)
Q Consensus 427 si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~-~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~ 493 (508)
+|||+|.+++++++ .++++|+|+||+++. ...+.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 390 ~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 390 YVFGKDMDVAKGII--NQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp EEECSCHHHHHHHH--HTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred EEECCCHHHHHHHH--HhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEe
Confidence 99999999999999 889999999999753 345679999999999999999999999999999976
No 43
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.2e-92 Score=754.11 Aligned_cols=469 Identities=19% Similarity=0.200 Sum_probs=420.2
Q ss_pred hhcCCCCCCCCceecCEEecCCCeEEeecCCCCceEE-EEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHH
Q 010520 12 SEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIA-TVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDA 90 (508)
Q Consensus 12 ~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~~g~~i~-~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~ 90 (508)
..+.+.....++||||+|+.+.. ++||+||++++ +++.++.+|+++++++|++|++.|+.++.++|.++|+++++.
T Consensus 21 ~~~~~~~~~~~~~I~G~~~~~~~---v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~ 97 (528)
T 3v4c_A 21 QSMMIFTPKGKHLVAGEWLDGAG---TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADE 97 (528)
T ss_dssp --CCSCCCCCCEEETTEEECCSS---EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHhhhcccccCceECCEEecCCC---ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 34445667788999999996544 99999999998 999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhhhhhhh--cCCcc----cCC--CCCceeEEEEeecceEEEEe
Q 010520 91 LREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQL--NGSVI----PSE--RPNHMMLETWNPLGVVGVIT 162 (508)
Q Consensus 91 l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~--~~~~~----~~~--~~~~~~~~~~~P~GVv~~i~ 162 (508)
|++++++|+++++.|+|||+.+++.|+...++.+++++...+.. .+... +.. .++...+..++|+|||++|+
T Consensus 98 l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 177 (528)
T 3v4c_A 98 IEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFG 177 (528)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEEC
T ss_pred HHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEEC
Confidence 99999999999999999999999999999999999999887652 22111 111 12234677899999999999
Q ss_pred CCCCchhhhH--HHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCE
Q 010520 163 AFNFPCAVLG--WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISL 239 (508)
Q Consensus 163 p~n~P~~~~~--~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~ 239 (508)
|||||+.+.+ +++++||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+| +.+.++.|++||+||+
T Consensus 178 PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~ 257 (528)
T 3v4c_A 178 ASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKA 257 (528)
T ss_dssp CSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCE
T ss_pred CCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCE
Confidence 9999999855 899999999999999999999999999999999999999999999999999 7789999999999999
Q ss_pred EEEeCCHHHHHHHHHHhhhcc--CceeeccCccCeEEEcCCC---CHHHHHHHHHHHHHhhcCCCcCCCceEEEecc-cH
Q 010520 240 VSFTGSTKVGLMVQQTVHQRF--GKCLLELSGNNAIIIMDDA---DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHES-IY 313 (508)
Q Consensus 240 v~ftGs~~~g~~i~~~a~~~~--~~~~~elgG~~~~iV~~da---Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-i~ 313 (508)
|+||||+.+|+.|++.+++++ +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +|
T Consensus 258 V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~ 337 (528)
T 3v4c_A 258 VGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA 337 (528)
T ss_dssp EEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH
T ss_pred EEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH
Confidence 999999999999999999999 9999999999999999999 88999999999999999999999999999997 99
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEE-ecCCC---
Q 010520 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPT--- 389 (508)
Q Consensus 314 ~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~--- 389 (508)
|+|+++|+++++++++ ++.+||+++..+.+++.++++ ++|+++++||.. .|+|++|||+ +++++
T Consensus 338 d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 338 DRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCccccc
Confidence 9999999999998864 367889988777777666653 379999999975 7999999988 46666
Q ss_pred CcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecC--CHHHHHHhhcccCcc--eeEEEEcCCCCC--CCCCC
Q 010520 390 ADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR--SPENIFKWLGPHGSD--TGIVNVNIPTNG--AEIGG 463 (508)
Q Consensus 390 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~--d~~~~~~~~~~~~~~--~g~V~iN~~~~~--~~~~~ 463 (508)
+.+++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++ .+++ +|+|+||+++.. ..+.+
T Consensus 406 ~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a--~~l~~~aG~V~vN~~~~~~~~~~~~ 483 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLR--PVLERKAGRVLVNGFPTGVEVVDSM 483 (528)
T ss_dssp CGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHH--HHHHHHEEEEEESSCTTCCCCSTTC
T ss_pred ChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHH--HHHhhcCcEEEEcCCCCCCccCCCC
Confidence 899999999999999999999999999999999999999999 889999999 7787 999999996543 34678
Q ss_pred CccC-CCCCCCCCcc--hHHHHHHhhheeEEEEeCCCC
Q 010520 464 AFGG-EKATGGGREA--GSDSWKQYMRRSTCTINYGNE 498 (508)
Q Consensus 464 pfGG-~~~SG~g~~~--g~~~~~~~~~~k~v~~~~~~~ 498 (508)
|||| +|.||+|+++ |++|+++|++.|+ +.++|..
T Consensus 484 pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~-~q~~p~~ 520 (528)
T 3v4c_A 484 VHGGPYPASTNFGATSVGTMSIRRFLRPVA-YQNMPED 520 (528)
T ss_dssp CCCCTTTTBSCTTCCSSSGGGGGGGEEEEE-EESCCGG
T ss_pred CCCCCCCCCCCCCCCCCcHHHHHHhchhHH-hhcCCcc
Confidence 9999 9999999986 9999999999986 4667654
No 44
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.3e-91 Score=734.56 Aligned_cols=430 Identities=21% Similarity=0.336 Sum_probs=389.1
Q ss_pred cCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhh-hhHHHHHHHHHHHhh
Q 010520 51 VEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVG 129 (508)
Q Consensus 51 ~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~ 129 (508)
...+.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++ .|+...++.+++++.
T Consensus 13 ~~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 13 RGSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp -----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4556779999999999999999999999999999999999999999999999999999999997 599888888888766
Q ss_pred hhhhhcCC-ccc--CCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHH
Q 010520 130 LSRQLNGS-VIP--SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSE 206 (508)
Q Consensus 130 ~~~~~~~~-~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~ 206 (508)
..+..... ... ........++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..++++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l--- 169 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATI--- 169 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHH---
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHH---
Confidence 54432211 110 011234577889999999999999999999999999999999999999999999999887655
Q ss_pred HHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHH
Q 010520 207 VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVR 286 (508)
Q Consensus 207 ~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~ 286 (508)
+.++ +|+|++|+|+|+.+.+..|+.| ++|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++
T Consensus 170 -~~~a-lP~gvv~vv~g~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~ 246 (469)
T 3sza_A 170 -IPQY-LDKDLYPVINGGVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACR 246 (469)
T ss_dssp -HHHH-SCTTTSCBCCCSHHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHH
T ss_pred -HHHh-CCcceEEEEECCHHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHH
Confidence 4556 9999999999976667778887 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEe
Q 010520 287 SVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366 (508)
Q Consensus 287 ~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~ 366 (508)
.+++++|.|+||.|++++|||||+++||+|+++|+++++++ .|+|.++++++||+++.++++++.+++ +|++++
T Consensus 247 ~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~ 320 (469)
T 3sza_A 247 RIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVA 320 (469)
T ss_dssp HHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEE
T ss_pred HHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEE
Confidence 99999999999999999999999999999999999999988 599999999999999999999999988 689999
Q ss_pred eCCcccCCCCceeccEEE-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCc
Q 010520 367 TGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGS 445 (508)
Q Consensus 367 ~gg~~~~~~g~~~~Ptv~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~ 445 (508)
+||.. +..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++ .++
T Consensus 321 ~GG~~-~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l 397 (469)
T 3sza_A 321 YGGTG-DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMI--AET 397 (469)
T ss_dssp ECCCE-ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHH--HHC
T ss_pred eCCcc-CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHH--HhC
Confidence 99986 457999999987 79999999999999999999999999999999999999999999999999999999 789
Q ss_pred ceeEEEEcCCCC-CCCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeC
Q 010520 446 DTGIVNVNIPTN-GAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 446 ~~g~V~iN~~~~-~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 495 (508)
++|+|+||+... ...+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 398 ~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 398 SSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp CCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred CcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 999999999753 34567899999999999999999999999999999874
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=2.2e-89 Score=726.06 Aligned_cols=444 Identities=19% Similarity=0.259 Sum_probs=403.9
Q ss_pred CCCeEEeecCCCCceE-EEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh
Q 010520 32 HGPTVSSINPVNNQKI-ATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL 110 (508)
Q Consensus 32 ~~~~~~v~~P~~g~~i-~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 110 (508)
++.+++++||+||+++ ++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+|||+
T Consensus 5 ~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 84 (510)
T 1ez0_A 5 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPE 84 (510)
T ss_dssp CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 4568999999999999 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhh--hcCCcc----cCCCC-C-ceeEEEEeecceEEEEeCCCCchhhh--HHHHHHHhh
Q 010520 111 PEGIGEVQEVIDMCDFAVGLSRQ--LNGSVI----PSERP-N-HMMLETWNPLGVVGVITAFNFPCAVL--GWNACIALV 180 (508)
Q Consensus 111 ~~a~~ev~~~~~~~~~~~~~~~~--~~~~~~----~~~~~-~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l~~ALa 180 (508)
.+++.|+...++.+++++...+. ..+... +...+ + ...+..++|+|||++|+|||||+.+. .+++++||+
T Consensus 85 ~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALa 164 (510)
T 1ez0_A 85 VRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALA 164 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHH
Confidence 99999999999999999887764 222211 11111 1 13567899999999999999999984 499999999
Q ss_pred cCCEEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhc
Q 010520 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (508)
Q Consensus 181 aGN~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (508)
+||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+| +.+.++.|++||+||+|+||||+.+|+.|++.++++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 244 (510)
T 1ez0_A 165 AGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER 244 (510)
T ss_dssp HTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHS
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999 788999999999999999999999999999999988
Q ss_pred c--CceeeccCccCeEEEcCCCCHH--HHHHHHHHHHHhhcCCCcCCCceEEEecc-cHHHHHHHHHHhhhhcccCCCCC
Q 010520 260 F--GKCLLELSGNNAIIIMDDADIK--LAVRSVLFAAVGTAGQRCTTCRRLLIHES-IYQTVLDQLVDVYKQVKIGDPLE 334 (508)
Q Consensus 260 ~--~~~~~elgG~~~~iV~~daDl~--~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~L~~~~~~~~~g~p~~ 334 (508)
+ +|+++|+|||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++++
T Consensus 245 l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~----- 319 (510)
T 1ez0_A 245 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP----- 319 (510)
T ss_dssp SSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC-----
T ss_pred CCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC-----
Confidence 6 9999999999999999999999 99999999999999999999999999999 999999999999998874
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCCCCceeccEEE-ecCCC---CcccccccccceeEeEEeCC
Q 010520 335 KGTLLGPLHTPESRKNFEKGIENIKS-QGGKILTGGSVIESEGNFVQPTIV-EISPT---ADIVKEELFAPVLYVMKFQT 409 (508)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~-~ga~v~~gg~~~~~~g~~~~Ptv~-~~~~~---~~~~~~E~fgPvl~v~~~~~ 409 (508)
||++++.+.+++.++++++++ +|+++++||. +|+|++|||+ +++++ +.+++||+||||++|++|+|
T Consensus 320 -----gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~ 390 (510)
T 1ez0_A 320 -----STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCEN 390 (510)
T ss_dssp -----BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESS
T ss_pred -----CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCC
Confidence 588899999999999999984 7999999996 2899999988 56566 89999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEecCCH--HHHHHhhcccCc--ceeEEEEcCCCCC--CCCCCCccC-CCCCCCCCc--chHH
Q 010520 410 FEEAVKINNSVPQGLSSSIFTRSP--ENIFKWLGPHGS--DTGIVNVNIPTNG--AEIGGAFGG-EKATGGGRE--AGSD 480 (508)
Q Consensus 410 ~~eai~~~n~~~~gl~~si~s~d~--~~~~~~~~~~~~--~~g~V~iN~~~~~--~~~~~pfGG-~~~SG~g~~--~g~~ 480 (508)
+||||+++|+++|||++||||+|. +++++++ .++ ++|+|+||+++.. ..+.+|||| +|.||+|+. +|.+
T Consensus 391 ~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~--~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~ 468 (510)
T 1ez0_A 391 VADMLSLSEMLAGSLTATIHATEEDYPQVSQLI--PRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAE 468 (510)
T ss_dssp HHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHH--HHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGG
T ss_pred HHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHH--HHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHH
Confidence 999999999999999999999987 7899998 667 7999999986542 235789999 799998854 7999
Q ss_pred HHHHhhheeEE
Q 010520 481 SWKQYMRRSTC 491 (508)
Q Consensus 481 ~~~~~~~~k~v 491 (508)
++++|++.|++
T Consensus 469 gl~~~~~~k~~ 479 (510)
T 1ez0_A 469 AIHRWLRPVAY 479 (510)
T ss_dssp GGGGGEEEEEE
T ss_pred HHHHhheEEEE
Confidence 99999998865
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=7.9e-87 Score=744.49 Aligned_cols=437 Identities=27% Similarity=0.420 Sum_probs=403.8
Q ss_pred EcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHHHhh
Q 010520 50 VVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVG 129 (508)
Q Consensus 50 v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~ 129 (508)
++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|+++.++|+++++.|+|||+.+++.|+..+++.++|++.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCcc-cCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHH
Q 010520 130 LSRQLNGSVI-PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208 (508)
Q Consensus 130 ~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l 208 (508)
..+...+... .....+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..++ +++
T Consensus 624 ~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~----ell 699 (1001)
T 3haz_A 624 QGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAV----ALL 699 (1001)
T ss_dssp HHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHH----HHH
T ss_pred HHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHH----HHH
Confidence 8877654321 12223456778899999999999999999999999999999999999999999999998774 556
Q ss_pred HhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhc---cCceeeccCccCeEEEcCCCCHHHHH
Q 010520 209 ERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR---FGKCLLELSGNNAIIIMDDADIKLAV 285 (508)
Q Consensus 209 ~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~---~~~~~~elgG~~~~iV~~daDl~~aa 285 (508)
.++|+|+|++|+|+|+...+..|++||+|++|+||||+.+|+.|++.++++ ++|+++|+|||||+||++|||++.|+
T Consensus 700 ~eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 700 HEAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HHhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 788999999999999443399999999999999999999999999998864 79999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeE
Q 010520 286 RSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI 365 (508)
Q Consensus 286 ~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v 365 (508)
+.+++|+|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++..+.+++.+++++++++| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888 88
Q ss_pred eeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCC--HHHHHHHhccCCCCcEEEEecCCHHHHHHhhccc
Q 010520 366 LTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQT--FEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPH 443 (508)
Q Consensus 366 ~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~ 443 (508)
+||.. +..|+|++|||+.. +++.+++||+||||++|++|++ ++|||+++|+++|||+++|||+|.+.+++++ .
T Consensus 859 -~gg~~-~~~G~fv~PTvl~~-~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a--~ 933 (1001)
T 3haz_A 859 -HFAGP-APEGCFVAPHIFEL-TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAII--D 933 (1001)
T ss_dssp -EEECC-CCSSSCCCCEEEEC-SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHH--H
T ss_pred -ecccc-CCCCcEEeeEEecC-CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHH--H
Confidence 88876 44699999999975 6788999999999999999986 8999999999999999999999999999999 7
Q ss_pred CcceeEEEEcCCCCCCC-CCCCccCCCCCCCC-CcchHHHHHHhhheeEEEEeCC
Q 010520 444 GSDTGIVNVNIPTNGAE-IGGAFGGEKATGGG-REAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 444 ~~~~g~V~iN~~~~~~~-~~~pfGG~~~SG~g-~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
++++|+|+||+++.+.. ..+||||+|.||+| +.+|++++++|++.|+|++++.
T Consensus 934 ~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~~ 988 (1001)
T 3haz_A 934 RVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINTA 988 (1001)
T ss_dssp HCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEECG
T ss_pred hCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECCc
Confidence 89999999999765443 45799999999999 5678999999999999999874
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.1e-83 Score=666.83 Aligned_cols=410 Identities=17% Similarity=0.153 Sum_probs=338.3
Q ss_pred EeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHh-------CCC
Q 010520 37 SSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEM-------GKI 109 (508)
Q Consensus 37 ~v~~P~~g~~i~~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------Gk~ 109 (508)
-++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 699
Q ss_pred hh----hhhhhHHHHHHHHHHHhhhhhhhcCCcccCC--CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCC
Q 010520 110 LP----EGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGN 183 (508)
Q Consensus 110 ~~----~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN 183 (508)
.. +++.|+..+++.+++++...+...+...+.. .++...+..++|+|||++|+||| |.+.. +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 87 5678999999999999977665555432211 12335678899999999999887 87766 89999999999
Q ss_pred EEEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCce
Q 010520 184 CVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263 (508)
Q Consensus 184 ~VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~ 263 (508)
+||+|||+.+|+++..+++++.++|.++| |+|++|+|+|+.++++.|++||+||+|+||||+.+|+.|++.++ ++|+
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv 244 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPV 244 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCB
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCE
Confidence 99999999999999999999999988889 99999999997778999999999999999999999999999887 8999
Q ss_pred eeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCC
Q 010520 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLH 343 (508)
Q Consensus 264 ~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~ 343 (508)
++|+|||||+||++|||++.|++.+++++|.| ||.|++++|||||+++|| ||+
T Consensus 245 ~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p~- 297 (463)
T 2h5g_A 245 MGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TPL- 297 (463)
T ss_dssp CSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SHH-
T ss_pred EEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hHH-
Confidence 99999999999999999999999999999999 999999999999999998 232
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCC
Q 010520 344 TPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQG 423 (508)
Q Consensus 344 ~~~~~~~~~~~v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 423 (508)
+++++++++++|++++.|+.. ...|+|+ ++++.+++||+||||++|++|+|+||||+++|+++||
T Consensus 298 -------~~~~i~~~~~~Ga~v~~G~~~-~~~g~~~-------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~g 362 (463)
T 2h5g_A 298 -------FDQIIDMLRVEQVKIHAGPKF-ASYLTFS-------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSS 362 (463)
T ss_dssp -------HHHHHHHHHHTTCEEEECHHH-HC----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCS
T ss_pred -------HHHHHHHHHhCCCEEEeCCcc-cccCccC-------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCC
Confidence 233577888899999855432 2345554 4689999999999999999999999999999999999
Q ss_pred cEEEEecCCHHHHHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC--Cc--chHHHHHHhhheeEEEEeCC
Q 010520 424 LSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG--RE--AGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 424 l~~si~s~d~~~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g--~~--~g~~~~~~~~~~k~v~~~~~ 496 (508)
|+++|||+|.+++++++ .++++|+|+||+++. ..+.+||||+|.||+| ++ +|.+++++|++.|+|+++..
T Consensus 363 Laa~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~ 436 (463)
T 2h5g_A 363 HTDVIVTEDENTAEFFL--QHVDSACVFWNASTR-FSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD 436 (463)
T ss_dssp SEEEEECSCHHHHHHHH--HHCCSSEEEESSCGG-GCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS
T ss_pred ceEEEEeCCHHHHHHHH--HhCCeeEEEEeCCcc-CCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC
Confidence 99999999999999999 789999999998654 3467999999999999 65 89999999999999998764
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=3.9e-82 Score=663.65 Aligned_cols=428 Identities=15% Similarity=0.172 Sum_probs=376.9
Q ss_pred EEcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh-hHHHHHHHHHHH
Q 010520 49 TVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFA 127 (508)
Q Consensus 49 ~v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~ 127 (508)
.++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+||+..+++. +....++.+..+
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~ 84 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNY 84 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHh
Confidence 4556788999999999999999999999999999999999999999999999999999999988753 333344433332
Q ss_pred hhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHH
Q 010520 128 VGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (508)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~ 207 (508)
. +...........++...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++|.++
T Consensus 85 ~---~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~ 161 (464)
T 3k9d_A 85 I---KDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEA 161 (464)
T ss_dssp H---TTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred h---hcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHH
Confidence 2 2211111111123446678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccC-ccCeEEEcCCCCHHHHH
Q 010520 208 FERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS-GNNAIIIMDDADIKLAV 285 (508)
Q Consensus 208 l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elg-G~~~~iV~~daDl~~aa 285 (508)
+.++|+|+|++|+|+| +.+.++.|++||+||+|+||||+. +++.++++++|+ +|+| ||+|+||++|||++.|+
T Consensus 162 ~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa 236 (464)
T 3k9d_A 162 AEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAV 236 (464)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHH
T ss_pred HHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHH
Confidence 9999999999999999 789999999999999999999998 456677788998 7888 99999999999999999
Q ss_pred HHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhh-------hhcccCCCC-CCCCccCCCCCHHHHHHHHHHHHH
Q 010520 286 RSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVY-------KQVKIGDPL-EKGTLLGPLHTPESRKNFEKGIEN 357 (508)
Q Consensus 286 ~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~-------~~~~~g~p~-~~~~~~gpl~~~~~~~~~~~~v~~ 357 (508)
+.|++|+|+|+||.|+++++||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.++++.
T Consensus 237 ~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~ 316 (464)
T 3k9d_A 237 KHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGL 316 (464)
T ss_dssp HHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999986 456788887 678999999999999999999998
Q ss_pred HHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHH----HHhccCCCCcEEEEecCCH
Q 010520 358 IKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAV----KINNSVPQGLSSSIFTRSP 433 (508)
Q Consensus 358 a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~si~s~d~ 433 (508)
++.+|+++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+++|||+|.
T Consensus 317 a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~ 382 (464)
T 3k9d_A 317 TVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDK 382 (464)
T ss_dssp CCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred hhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCH
Confidence 88889999999864 355677755 89999999999999999997 7999999999999999999
Q ss_pred HHHHHhhcccCcceeEEEEcCCCCC--------CCCCCCccCCCCCCCCCcchHHHHHHhhheeEEEEeCCCCCCC
Q 010520 434 ENIFKWLGPHGSDTGIVNVNIPTNG--------AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGNELPL 501 (508)
Q Consensus 434 ~~~~~~~~~~~~~~g~V~iN~~~~~--------~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~~~~~ 501 (508)
+++++++ .++++|+|+||+++.+ ..+.+|||| |.+|.|+++|..++++|++.|+|....+...++
T Consensus 383 ~~a~~~~--~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~~~~~~ 455 (464)
T 3k9d_A 383 EIIREFA--LKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVLELEDI 455 (464)
T ss_dssp HHHHHHH--HHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCCCHHHH
T ss_pred HHHHHHH--HhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCCchhhh
Confidence 9999999 7899999999997642 457899999 889999999999999999999998877654433
No 49
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=2.6e-80 Score=648.30 Aligned_cols=400 Identities=18% Similarity=0.194 Sum_probs=325.2
Q ss_pred HHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh----hhhh-hhHHH-HHHHHHHHhhh
Q 010520 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL----PEGI-GEVQE-VIDMCDFAVGL 130 (508)
Q Consensus 57 ~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~-~ev~~-~~~~~~~~~~~ 130 (508)
.+++++++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+|||. .+++ .|+.. .++.+++++..
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999998 8875 78888 77888888876
Q ss_pred hhhhc------CCcccCC-C-CCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHH
Q 010520 131 SRQLN------GSVIPSE-R-PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202 (508)
Q Consensus 131 ~~~~~------~~~~~~~-~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~ 202 (508)
.+... +...+.. . .+...+..++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 66544 2221211 1 1334578899999999999999 9 9999999999999999999999999999999999
Q ss_pred HHHHHHHh----CCCCCCeEEEecCChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCC
Q 010520 203 LVSEVFER----NKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (508)
Q Consensus 203 ~l~~~l~~----aGlP~g~~~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~d 278 (508)
++.++|.+ +|+|+|++|+|+++.++++.|.+||+||.|+||||+.+|+.|++.+ .+|+++|+|||||+||++|
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~d 249 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDED 249 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECTT
T ss_pred HHHHHHHhhchhcCCCCCcEEEECCHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECCC
Confidence 99988899 9999999999993337899999999999999999999999999887 6999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhccc---CCCCCCCCccCCCCCHHHHHHHHHH-
Q 010520 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI---GDPLEKGTLLGPLHTPESRKNFEKG- 354 (508)
Q Consensus 279 aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~~~~- 354 (508)
||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |||.+ .++
T Consensus 250 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~ 310 (468)
T 1vlu_A 250 ADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAY 310 (468)
T ss_dssp CCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHH
T ss_pred CCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hccc
Confidence 9999999999999999999 99999999999999 9999999999999987 76633 334
Q ss_pred HHHHHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHH
Q 010520 355 IENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434 (508)
Q Consensus 355 v~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~ 434 (508)
++++. ++++||. | ++||++ +++++.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 311 i~~a~----~~~~gG~-----g--~~Ptvl-v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 378 (468)
T 1vlu_A 311 FDKLN----ELGKLTE-----A--IQCKTV-DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKA 378 (468)
T ss_dssp HHHHH----HHTCCCH-----H--HHTTBC--------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHH
T ss_pred ccccc----eeeccCC-----C--CCCcee-eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHH
Confidence 55554 4677775 4 689877 8889999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCcceeEEEEcCCCCCCCCCCCcc-----CCCCCCCCCcchHHHHHHhhheeEEEEeCC
Q 010520 435 NIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFG-----GEKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 435 ~~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfG-----G~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
++++++ .++++|+|+||+++. ..++.||| |+|.||+|++ |.+++++|++.|+|+++..
T Consensus 379 ~a~~~~--~~l~aG~V~vN~~~~-~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~~ 441 (468)
T 1vlu_A 379 NAEKFM--KGVDSSGVYWNASTR-FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGDG 441 (468)
T ss_dssp HHHHHH--HHCCCSEEEESSCGG-GCC-----------------------CCSGGGEEEEEEEECSS
T ss_pred HHHHHH--HhCCeeEEEEcCCCC-CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECCC
Confidence 999999 789999999998654 34578999 9999999999 9999999999999998753
No 50
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1e-77 Score=623.32 Aligned_cols=390 Identities=22% Similarity=0.299 Sum_probs=343.8
Q ss_pred HHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh----hhhh--------hhHHHHHH
Q 010520 55 LEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL----PEGI--------GEVQEVID 122 (508)
Q Consensus 55 ~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~ev~~~~~ 122 (508)
.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+||+. .+++ .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999986 5553 58999999
Q ss_pred HHHHHhhhhhhhcCCcccCC--CCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHH
Q 010520 123 MCDFAVGLSRQLNGSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200 (508)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l 200 (508)
.+++++.+.+. .+...+.. ..+...+..++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++..+
T Consensus 93 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l 169 (427)
T 1o20_A 93 ACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAI 169 (427)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHH
Confidence 99999876654 23222211 12334678899999999999875 478999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCeEEEecC-C-hhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCC
Q 010520 201 TKLVSEVFERNKLPGAIFTSFCG-G-AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (508)
Q Consensus 201 ~~~l~~~l~~aGlP~g~~~~v~g-~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~d 278 (508)
++++.++|.++|+|+|++|+|+| + .+.++.|.+||+||.|+||||+.+|+.|++.+ .+|+++|+|||||+||++|
T Consensus 170 ~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~d 246 (427)
T 1o20_A 170 VSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDES 246 (427)
T ss_dssp HHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCC
Confidence 99999999999999999999998 5 45788899999999999999999999999887 5999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHH
Q 010520 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENI 358 (508)
Q Consensus 279 aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a 358 (508)
||++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 247 ADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 297 (427)
T 1o20_A 247 ADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE---------------------------- 297 (427)
T ss_dssp SCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE----------------------------
T ss_pred CCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe----------------------------
Confidence 9999999999999999999 99999999999999999999999999987652
Q ss_pred HHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHH
Q 010520 359 KSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438 (508)
Q Consensus 359 ~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~ 438 (508)
+.||... .+ |+ ||| +++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 298 -------~~gg~~~--~~-~~-Ptl--~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 364 (427)
T 1o20_A 298 -------VRGCEKT--RE-IV-PDV--VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKK 364 (427)
T ss_dssp -------EEECHHH--HH-HS-TTS--EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHH
T ss_pred -------eecChhh--hh-hC-Ccc--cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHH
Confidence 1222211 12 33 886 34568899999999999999999999999999999999999999999999999
Q ss_pred hhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC----CcchHHHHHHhhheeEEEEeC
Q 010520 439 WLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG----REAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 439 ~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g----~~~g~~~~~~~~~~k~v~~~~ 495 (508)
++ .++++|+|+||++.. ..+..||||.|.||+| +++|.+++++|++.|+|+++.
T Consensus 365 ~~--~~l~~G~V~iN~~~~-~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 365 FV--SEIDAAAVYVNASTR-FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HH--HHCCSSEEEESSCGG-GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HH--HhCCccEEEECCCCc-cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 99 789999999998654 3467899999999997 467999999999999998875
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=2.6e-77 Score=623.18 Aligned_cols=392 Identities=17% Similarity=0.203 Sum_probs=334.5
Q ss_pred HHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh----hhhh--------hhHHHHHH
Q 010520 55 LEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL----PEGI--------GEVQEVID 122 (508)
Q Consensus 55 ~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~ev~~~~~ 122 (508)
.+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++|+++++.|+||+. .+++ .++..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999985 3554 37888899
Q ss_pred HHHHHhhhhhhhcCCcccC--CCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHH
Q 010520 123 MCDFAVGLSRQLNGSVIPS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200 (508)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l 200 (508)
.+++++.+.+.. +...+. ...+...+..++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus 105 ~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 999988776533 222221 113446678899999999999998 8 68899999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCeEEEecC-Ch-hhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCC
Q 010520 201 TKLVSEVFERNKLPGAIFTSFCG-GA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (508)
Q Consensus 201 ~~~l~~~l~~aGlP~g~~~~v~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~d 278 (508)
++++.++|.++|+|+|++|+|+| +. +.++.|.+||+||.|+||||+.+|+.|++.+ ++|+++|+|||||+||++|
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~d 258 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDR 258 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCC
Confidence 99999999999999999999998 55 5788888999999999999999999998876 6999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhccc---CCCCCCCCccCCCCCHHHHHHHHHHH
Q 010520 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI---GDPLEKGTLLGPLHTPESRKNFEKGI 355 (508)
Q Consensus 279 aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (508)
||++.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |+|.+ .+++
T Consensus 259 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~-----------------~~~i 320 (444)
T 4ghk_A 259 ASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADA-----------------RAVL 320 (444)
T ss_dssp CCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHHH-----------------HHHH
T ss_pred CCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHHH-----------------HHHH
Confidence 9999999999999999999 9999999999999999999999999999887 65421 3445
Q ss_pred HHHHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHH
Q 010520 356 ENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435 (508)
Q Consensus 356 ~~a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~ 435 (508)
+++. . | + .+++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 321 ~~a~-~--------------G------~-~~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 378 (444)
T 4ghk_A 321 EAAG-V--------------G------P-LVDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDR 378 (444)
T ss_dssp HHTT-C--------------C------C-CEECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHH
T ss_pred Hhcc-c--------------C------c-ccCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHH
Confidence 5431 1 1 1 134578999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCcceeEEEEcCCCCCCCCCCCccCCCCCCCC----CcchHHHHHHhhheeEEEEeC
Q 010520 436 IFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGEKATGGG----REAGSDSWKQYMRRSTCTINY 495 (508)
Q Consensus 436 ~~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~g----~~~g~~~~~~~~~~k~v~~~~ 495 (508)
+++++ .++++|+|+||+++.. .+..||||.+.||+| +++|.+++++||+.|+|+++.
T Consensus 379 a~~~a--~~l~aG~V~vN~~~~~-~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 379 AMRFL--REVDSASVMVNASTRF-ADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp HHHHH--HHCCSSEEEEEECGGG-CSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred HHHHH--HhCCcceEEEcCCCcc-CCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 99999 7899999999997643 467899999999988 678999999999999999875
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=3.2e-77 Score=624.39 Aligned_cols=418 Identities=19% Similarity=0.213 Sum_probs=345.8
Q ss_pred EcCCCHHHHHHHHHHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChhhhhh-hHHHHHHHH-HHH
Q 010520 50 VVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMC-DFA 127 (508)
Q Consensus 50 v~~~~~~~v~~al~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~-~~~ 127 (508)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++. ++...++.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 467889999999999999999999999999999999999999999999999999999999999875 666666655 333
Q ss_pred hhhhhhhcCCcccCCCCCceeEEEEeecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHH
Q 010520 128 VGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (508)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~ 207 (508)
... ...+. . ...++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 81 ~~~--~~~g~-~-~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KDE--QTCGI-L-EEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TTC--CCSEE-C--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhc--ccccc-c-cCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 321 11111 1 1122335678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCeEEEecC-ChhhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHH
Q 010520 208 FERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVR 286 (508)
Q Consensus 208 l~~aGlP~g~~~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~ 286 (508)
+.++|+|+|++|+|+| +.+.++.|++||+|++|+||||+.++ +.++++++|+++|+|||+|+||++|||++.|++
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~ 232 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKRAVA 232 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHHHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHH
Confidence 9999999999999999 78999999999999999999999854 456678999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEe
Q 010520 287 SVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366 (508)
Q Consensus 287 ~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~ 366 (508)
.|++|+|+|+||.|+++++||||+++||+|+++|+++ +||+++.++.+++.++++.+...|+++
T Consensus 233 ~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v- 296 (452)
T 3my7_A 233 SVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI- 296 (452)
T ss_dssp HHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-
T ss_pred HHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-
Confidence 9999999999999999999999999999999999875 389999999999999998765567776
Q ss_pred eCCccc---CCCCceeccEE-------E-ecCCCCcccccccccceeEeEEeCCHHHHHHHhccCC----CCcEEEEecC
Q 010520 367 TGGSVI---ESEGNFVQPTI-------V-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVP----QGLSSSIFTR 431 (508)
Q Consensus 367 ~gg~~~---~~~g~~~~Ptv-------~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~si~s~ 431 (508)
+||... +..|+|++||+ + ++++++++.+ |+||||++|++|+|+||||+++|++. |||+++|||+
T Consensus 297 ~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~ 375 (452)
T 3my7_A 297 VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTN 375 (452)
T ss_dssp TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESC
T ss_pred ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcC
Confidence 476542 13699999995 3 4677888775 89999999999999999999999974 9999999999
Q ss_pred CHHHHHH---hhcccCcceeEEEEcCCCCCCCCCC------C---ccCCCCCCCCCcchHHHHHHhhheeEEEEe
Q 010520 432 SPENIFK---WLGPHGSDTGIVNVNIPTNGAEIGG------A---FGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
Q Consensus 432 d~~~~~~---~~~~~~~~~g~V~iN~~~~~~~~~~------p---fGG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 494 (508)
|.+.+++ ++ .++++|+|+||+++.+...+. + .-|++..|.+...+..+.++|++.|+|..+
T Consensus 376 d~~~a~~i~~~a--~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~~ 448 (452)
T 3my7_A 376 QDVNADRIRYFG--DKMKTARILINIPTTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKR 448 (452)
T ss_dssp TTTCHHHHHHHH--HHCCCSEEEESCCCC----------------------------CCCCCGGGGEEEEEEECC
T ss_pred CHHHHHHHHHHH--HhCCEEEEEECCCCCCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEee
Confidence 9887777 88 789999999999765321111 0 014455566666677788999999998654
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.62 E-value=0.058 Score=53.85 Aligned_cols=342 Identities=16% Similarity=0.153 Sum_probs=174.1
Q ss_pred HhccCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHh-CCC------hhhhhhhHHHH--------HHHHHHHhhhh----
Q 010520 71 IWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEM-GKI------LPEGIGEVQEV--------IDMCDFAVGLS---- 131 (508)
Q Consensus 71 ~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-Gk~------~~~a~~ev~~~--------~~~~~~~~~~~---- 131 (508)
.|+..+..+-.+..+.+.+.++++-|+-....++.. |.. +.-...|++.+ .+.++......
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l~~~~~~ai~~A~~~I~~fh 105 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQALPAEQAKALREAAERIRAYA 105 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 355555666666677777777777666555555543 211 11111222211 12222222211
Q ss_pred hhhcC-CcccCCCCCceeEEEEeecceEEEEeCCC---CchhhhHHHHHHHhhcCCE--EEeeCCCCChhHHHHHHHHHH
Q 010520 132 RQLNG-SVIPSERPNHMMLETWNPLGVVGVITAFN---FPCAVLGWNACIALVCGNC--VVWKGAPTTPLITIAITKLVS 205 (508)
Q Consensus 132 ~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~l~~ALaaGN~--VVlkps~~~~~~~~~l~~~l~ 205 (508)
+.... .......++.....++.|+--|++..|.- ||-. ++....||-.+|.. |+.-|.+........+
T Consensus 106 ~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL----- 179 (423)
T 4gic_A 106 ERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSS-VLMNAVPAKVAGVPELIMAVPAPRGELNALVL----- 179 (423)
T ss_dssp HHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHH-HHHHHHHHHHHTCSEEEEECCCGGGCCCHHHH-----
T ss_pred HhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhH-HHHhhccHHHhCCCeEEEecCCCCCCccHHHH-----
Confidence 11211 11122334556667889999999999944 7754 44578899999985 3445543211111111
Q ss_pred HHHHhCCCCCCeEEEec-CChhhHHHHHc----CCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccC-ccCe--EEEcC
Q 010520 206 EVFERNKLPGAIFTSFC-GGAEIGQAIAK----DPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS-GNNA--IIIMD 277 (508)
Q Consensus 206 ~~l~~aGlP~g~~~~v~-g~~~~~~~L~~----~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elg-G~~~--~iV~~ 277 (508)
-+...+|+-+ +.. ||.+.-.+|.- -|.||.|+=.|..=+..+=.... ..+-..+- |.+= +|-++
T Consensus 180 ~AA~l~Gv~e----Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~----g~VgIDm~AGPSEilViAD~ 251 (423)
T 4gic_A 180 AAAYISGVDR----VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF----GQVGIDMVAGPSEILVISDG 251 (423)
T ss_dssp HHHHHHTCCE----EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB----TTBEECCCCCCCEEEEEECS
T ss_pred HHHHhcCCcE----EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc----CCcCcccccccceEEEEeCC
Confidence 1234556533 332 56666666653 67899999888876543322221 22222221 3333 34444
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHH
Q 010520 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN 357 (508)
Q Consensus 278 daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~ 357 (508)
++|.+..+..++.-+=... . .+.++|..+ ++|.+++.+.+.+..-.-| . .+.. ..
T Consensus 252 ~a~p~~vAaDLlsQAEHd~----~-a~~iLvT~s--~~la~~V~~~i~~~l~~l~-----------r---~~i~----~~ 306 (423)
T 4gic_A 252 RTDPDWIAMDLFSQAEHDE----D-AQAILISPD--AAHLEAVQASIERLLPGME-----------R---AEVI----RT 306 (423)
T ss_dssp CSCHHHHHHHHHHHHTTCT----T-CEEEEEESC--HHHHHHHHHHHHHHGGGCT-----------T---HHHH----HH
T ss_pred CCCHHHHHHHHHHhhccCC----C-CeEEEEeCc--HHHHHHHHHHHHHHHhhCc-----------c---HHHH----HH
Confidence 6899998888876543332 2 345666555 3455555554443211100 1 1111 11
Q ss_pred HHHCCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHH
Q 010520 358 IKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIF 437 (508)
Q Consensus 358 a~~~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~ 437 (508)
+..+ +| .++.++|++|+++++|..-.= -.-|.++|.+...
T Consensus 307 sl~~------------------------------------~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~~~l 346 (423)
T 4gic_A 307 SLER------------------------------------RG---GMILVDDLEQAAAVANRIAPE-HLELSVESPEVLV 346 (423)
T ss_dssp HHHH------------------------------------HC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHHHHG
T ss_pred HHhc------------------------------------Cc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHHHHH
Confidence 2111 01 345679999999999986332 4677888876643
Q ss_pred HhhcccCcceeEEEEcCCCC--CCCCC-CCccCCCCCCCCCcchHHHHHHhhheeEEEEeCC
Q 010520 438 KWLGPHGSDTGIVNVNIPTN--GAEIG-GAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
Q Consensus 438 ~~~~~~~~~~g~V~iN~~~~--~~~~~-~pfGG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 496 (508)
.-. -.+|.|++...++ ..+.. -|--=-..+|+.|+.+.-+...|+++.++ +.++
T Consensus 347 ~~i----~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~~F~K~~s~-~~~s 403 (423)
T 4gic_A 347 ESI----RNAGAIFMGRYTAEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSL-IYCS 403 (423)
T ss_dssp GGC----CCCSEEEEC----------------CCCCTTGGGTCCCCCGGGGEEEEEE-EC--
T ss_pred hhC----cEeceeecCCCCchhhhhcCcCCCccCCCCCcccccCCCCHHHeeeeeeE-EEEC
Confidence 322 4689999976442 11110 01001134566666666778889887654 4443
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=97.11 E-value=0.27 Score=49.14 Aligned_cols=259 Identities=16% Similarity=0.165 Sum_probs=148.4
Q ss_pred CceeEEEEeecceEEEEeCC---CCchhhhHHHHHHHhhcCCE--EEeeCCCCChhHHHHHHHHHHHHHHhCCCCCCeEE
Q 010520 145 NHMMLETWNPLGVVGVITAF---NFPCAVLGWNACIALVCGNC--VVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFT 219 (508)
Q Consensus 145 ~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~--VVlkps~~~~~~~~~l~~~l~~~l~~aGlP~g~~~ 219 (508)
+.....++.|+.-|++..|. -||- +++....||-.+|.. |+.-|..-.|.+- -+...+|+-+ ++.
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~i~p~iL--------~AA~l~Gv~e-Iy~ 183 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADEIL--------YAAQLCGVQD-VFN 183 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSSCCHHHH--------HHHHHTTCCE-EEE
T ss_pred CcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCCCCHHHH--------HHHHHcCCCE-Eee
Confidence 44556678999999999996 4774 444578899999884 3445542333321 1245566643 222
Q ss_pred EecCChhhHHHHH----cCCCcCEEEEeCCHHHHHHHHHHhhhccCceeeccC-ccCe--EEEcCCCCHHHHHHHHHHHH
Q 010520 220 SFCGGAEIGQAIA----KDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS-GNNA--IIIMDDADIKLAVRSVLFAA 292 (508)
Q Consensus 220 ~v~g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elg-G~~~--~iV~~daDl~~aa~~i~~~~ 292 (508)
-||.+.-.+|. .-|.||.|+=.|..=+...=.. .....+.+-..+- |.+= +|-+++||.+..+..++.-+
T Consensus 184 --vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~-Vs~~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQA 260 (434)
T 1kae_A 184 --VGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQ-VSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQA 260 (434)
T ss_dssp --CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHH-HHHCTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHH
T ss_pred --cccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHH-hHhhcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 25666656565 3588999988887654332111 1111223332222 3333 34455689999888887654
Q ss_pred HhhcCCCcCCCceEEEecccHHHHHHHHHHhhhhcccCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCeEeeCCccc
Q 010520 293 VGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI 372 (508)
Q Consensus 293 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ga~v~~gg~~~ 372 (508)
=... . .+.++|..+ ++|.+++.+.+.+..-.-| . .+. ++.+.
T Consensus 261 EHd~----~-a~aiLvT~s--~~la~~V~~ev~~ql~~lp-----------r---~~i----a~~sl------------- 302 (434)
T 1kae_A 261 EHGP----D-SQVILLTPA--ADMARRVAEAVERQLAELP-----------R---AET----ARQAL------------- 302 (434)
T ss_dssp TTCT----T-CEEEEEESC--HHHHHHHHHHHHHHHTTCT-----------T---HHH----HHHHH-------------
T ss_pred ccCC----C-CcEEEEECC--HHHHHHHHHHHHHHHHhCC-----------h---HHH----HHHHH-------------
Confidence 3332 2 345566555 3455555444443210000 1 111 11121
Q ss_pred CCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCCCcEEEEecCCHHHHHHhhcccCcceeEEEE
Q 010520 373 ESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNV 452 (508)
Q Consensus 373 ~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~si~s~d~~~~~~~~~~~~~~~g~V~i 452 (508)
..- .|+.++|++||++++|..-.= -.-|.++|......-. -.+|.|++
T Consensus 303 --------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~~~l~~I----~nAGaIFl 350 (434)
T 1kae_A 303 --------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNARELVDSI----TSAGSVFL 350 (434)
T ss_dssp --------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHHHHGGGC----CSCSEEEE
T ss_pred --------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHHHHHhhc----Ccccchhc
Confidence 112 566789999999999986432 4678889986654332 47899999
Q ss_pred cCCCC--------CCCCCCCccCCCCCCCCCcchHHHHHHhhheeEE
Q 010520 453 NIPTN--------GAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
Q Consensus 453 N~~~~--------~~~~~~pfGG~~~SG~g~~~g~~~~~~~~~~k~v 491 (508)
...++ +.+.-+|- +|+.|+.+.-+...|+++.++
T Consensus 351 G~~tpe~~GDY~aG~NHvLPT-----~G~AR~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 351 GDWSPESAGDYASGTNHVLPT-----YGYTATCSSLGLADFQKRMTV 392 (434)
T ss_dssp STTCCHHHHHHTSSSCCCCCC-----TTGGGTCCCSCGGGGEEEEEE
T ss_pred CCCCchhhcccccCCCcccCC-----CCceeccCCCcHHhccceeeE
Confidence 87553 22223444 455566666678888887654
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=74.38 E-value=6.5 Score=30.83 Aligned_cols=60 Identities=20% Similarity=0.216 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHHHHHH-CCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCC
Q 010520 344 TPESRKNFEKGIENIKS-QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422 (508)
Q Consensus 344 ~~~~~~~~~~~v~~a~~-~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 422 (508)
+.+..+++.+.+..+.+ .|++++..|.. |.+++-++ .+-+.|+.|+|.++|.++.|+..|
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~---------~~~~eG~~----------~~~~viieFpS~~aa~~~~~s~~Y 76 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS---------VTELEGTA----------RARNVVIEFPSVQHAIDCYNSPEY 76 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC---------EEEEESCC----------CSEEEEEEESSHHHHHHHHHSHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC---------ceEEecCC----------cCeEEEEECCCHHHHHHHHcCHHH
Confidence 34444444444444443 58888876654 33332221 237789999999999999997655
No 56
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=67.12 E-value=7.6 Score=30.12 Aligned_cols=60 Identities=13% Similarity=0.166 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHHHHHHC-CCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccCCC
Q 010520 344 TPESRKNFEKGIENIKSQ-GGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422 (508)
Q Consensus 344 ~~~~~~~~~~~v~~a~~~-ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 422 (508)
+++..+++.+.+..+.++ |++++..| . +.+++-+. -...+.|+.|+|.+.|.++.|+..|
T Consensus 15 d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~---------~~~lEG~~---------~~~~~viieFps~~aa~a~y~SpeY 75 (94)
T 3lo3_A 15 DAEKLQQYGARVASTLAKYSGEVLVKG-S---------VEQLHGKF---------EHKAQVILEFPSREDAYNWYHSEEY 75 (94)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEEE-E---------CEEEESCC---------CCSEEEEEEESSHHHHHHHHHSHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEc-c---------cccccCCC---------CCCeEEEEECCCHHHHHHHHCCHHH
Confidence 444555555555555544 88888776 4 22222110 1357899999999999999998765
No 57
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=49.95 E-value=28 Score=29.60 Aligned_cols=113 Identities=8% Similarity=-0.038 Sum_probs=73.2
Q ss_pred ceEEEEeCCCC-chhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHh-CCCCCCeEEEec-C-ChhhHHHH
Q 010520 156 GVVGVITAFNF-PCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFER-NKLPGAIFTSFC-G-GAEIGQAI 231 (508)
Q Consensus 156 GVv~~i~p~n~-P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~-aGlP~g~~~~v~-g-~~~~~~~L 231 (508)
|.|+++..-+- +-...+.+-...+..|..++- |.-|+.. |++ .|+|...++=++ | +.++++.+
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~A-----T~gTa~~--------L~e~~Gl~v~~v~k~~eGG~p~I~d~I 78 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA-----TGTTGNL--------ISRATGMNVNAMLSGPMGGDQQVGALI 78 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEE-----ETTHHHH--------HHHHHCCCCEEECCGGGTHHHHHHHHH
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEE-----ccHHHHH--------HHHHhCceeEEEEecCCCCCchHHHHH
Confidence 76666655444 322333333446777998885 2334433 455 899987766443 2 34566655
Q ss_pred HcCCCcCEEEEeCC-------HHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcC
Q 010520 232 AKDPRISLVSFTGS-------TKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAG 297 (508)
Q Consensus 232 ~~~~~v~~v~ftGs-------~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~G 297 (508)
.+..|++|+||=+ ..-+..|.+.|-.+..|+..-+ ..++.++.+.+++..
T Consensus 79 -~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 79 -SEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp -HTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred -HCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 4678999999876 4578889999998888887443 456777777776654
No 58
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=47.72 E-value=8.3 Score=32.13 Aligned_cols=77 Identities=16% Similarity=0.005 Sum_probs=51.6
Q ss_pred HHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHh-CCCCCCeEEEec-C-ChhhHHHHHcCCCcCEEEEeCC-------H
Q 010520 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFER-NKLPGAIFTSFC-G-GAEIGQAIAKDPRISLVSFTGS-------T 246 (508)
Q Consensus 177 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~-aGlP~g~~~~v~-g-~~~~~~~L~~~~~v~~v~ftGs-------~ 246 (508)
..+..|..++- |.-|+.. |++ .|+|-..++=++ + +.++++.+. +-.|++|+||=+ .
T Consensus 26 ~~ll~Gf~l~A-----T~gTa~~--------L~e~~Gl~v~~v~k~~~eG~p~I~d~I~-~geIdlVInt~~pl~~~~h~ 91 (134)
T 2xw6_A 26 REVLARFPLVA-----TGTTGRR--------IEEATGLTVEKLLSGPLGGDQQMGARVA-EGRILAVIFFRDPLTAQPHE 91 (134)
T ss_dssp HHHHTTSCEEE-----CHHHHHH--------HHHHHCCCCEECSCGGGTHHHHHHHHHH-TTCEEEEEEECCTTTCCTTS
T ss_pred HHHhCCCEEEE-----ccHHHHH--------HHHhhCceEEEEEecCCCCcchHHHHHH-CCCccEEEEccCcccCCCcc
Confidence 34556776664 3344433 455 899987777666 5 456666554 578999999877 2
Q ss_pred HHHHHHHHHhhhccCceeecc
Q 010520 247 KVGLMVQQTVHQRFGKCLLEL 267 (508)
Q Consensus 247 ~~g~~i~~~a~~~~~~~~~el 267 (508)
.-+..|.+.|-.+..|+..-+
T Consensus 92 ~D~~~IrR~A~~~~IP~~T~l 112 (134)
T 2xw6_A 92 PDVQALLRVCDVHGVPLATNP 112 (134)
T ss_dssp CCSHHHHHHHHHHTCCEECSH
T ss_pred chHHHHHHHHHHcCCCeEcCH
Confidence 346778888888878776433
No 59
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=43.00 E-value=26 Score=29.34 Aligned_cols=59 Identities=17% Similarity=0.138 Sum_probs=44.1
Q ss_pred HHhCCCCCCeEEEecCC------hhhHHHHHcCCCcCEEEEeCCH-----HHHHHHHHHhhhccCceeecc
Q 010520 208 FERNKLPGAIFTSFCGG------AEIGQAIAKDPRISLVSFTGST-----KVGLMVQQTVHQRFGKCLLEL 267 (508)
Q Consensus 208 l~~aGlP~g~~~~v~g~------~~~~~~L~~~~~v~~v~ftGs~-----~~g~~i~~~a~~~~~~~~~el 267 (508)
|+++|+|...++-++-+ +++.+.+. +..|++|++|-+. .-+..|++.|-.+..|++..+
T Consensus 63 L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~-~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 63 LNANNVPATPVAWPSQEGQNPSLSSIRKLIR-DGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHTTCCCEEECCGGGC-----CBCHHHHHH-TTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHcCCeEEEEEeccCCCcccccccHHHHHH-CCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 57899998777766533 55666555 5689999997655 367888999988888887554
No 60
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=41.94 E-value=22 Score=31.09 Aligned_cols=118 Identities=8% Similarity=-0.076 Sum_probs=76.4
Q ss_pred EEeec-ceEEEEeCCCC-chhhhHHHHHHHhhcCCEEEeeCCCCChhHHHHHHHHHHHHHHh-CCCCCCeEEEec-C-Ch
Q 010520 151 TWNPL-GVVGVITAFNF-PCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFER-NKLPGAIFTSFC-G-GA 225 (508)
Q Consensus 151 ~~~P~-GVv~~i~p~n~-P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~~l~~-aGlP~g~~~~v~-g-~~ 225 (508)
..-|. |.|+++..-+- +-...+.+-...+..|..++- |.-|+.. |++ .|+|...++=++ | +.
T Consensus 22 ~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~~--------L~e~~Gl~v~~v~k~~eGG~p 88 (178)
T 1vmd_A 22 IFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGAL--------LQEKLGLKVHRLKSGPLGGDQ 88 (178)
T ss_dssp EEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHHH--------HHHHHCCCCEECSCGGGTHHH
T ss_pred eeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHHH--------HHHHhCceeEEEeecCCCCCc
Confidence 34454 77777665554 332333333456778998885 4445543 455 899976665443 2 34
Q ss_pred hhHHHHHcCCCcCEEEEeCC-------HHHHHHHHHHhhhccCceeeccCccCeEEEcCCCCHHHHHHHHHHHHHhhcC
Q 010520 226 EIGQAIAKDPRISLVSFTGS-------TKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAG 297 (508)
Q Consensus 226 ~~~~~L~~~~~v~~v~ftGs-------~~~g~~i~~~a~~~~~~~~~elgG~~~~iV~~daDl~~aa~~i~~~~~~~~G 297 (508)
++++.+ ..-.|++|+||=+ ..-+..|.+.|..+..|+..-+ ..|+.++.+.+++..
T Consensus 89 qI~d~I-~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 89 QIGAMI-AEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHHHHH-HTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred hHHHHH-HCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 566655 4678999999876 2357889999988888887443 467778888777654
No 61
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=36.84 E-value=26 Score=29.46 Aligned_cols=65 Identities=9% Similarity=0.158 Sum_probs=40.9
Q ss_pred CCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCCCCceeccEEEecCCCCcccccccccceeEeEEeCCHHHHHHHhccC
Q 010520 342 LHTPESRKNFEKGIENIKS-QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420 (508)
Q Consensus 342 l~~~~~~~~~~~~v~~a~~-~ga~v~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 420 (508)
+.+.+.++++.+....+.. .|++++..|.. +.+++-+.+ |. ...+.|+.|+|.+.|+++.|+.
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~---------~~~lEG~~~------e~-~~~~viieFPS~~aa~a~y~Sp 108 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF---------ELMLIGPQD------EH-WDHVFIAEYPSVAAFVEMIRDP 108 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE---------EEEEESCTT------CC-CSEEEEEEESCHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC---------ceeEECCCC------CC-CCeEEEEECCCHHHHHHHHcCH
Confidence 4455556666555554444 48888876654 223321111 11 2477899999999999999987
Q ss_pred CC
Q 010520 421 PQ 422 (508)
Q Consensus 421 ~~ 422 (508)
.|
T Consensus 109 eY 110 (143)
T 3hhl_A 109 VY 110 (143)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 62
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=30.24 E-value=1.2e+02 Score=21.17 Aligned_cols=36 Identities=6% Similarity=0.160 Sum_probs=26.6
Q ss_pred HHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010520 64 ACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 64 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
.++.....|..++.++|..+.....+.-.....++.
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667789999999999988877666555554443
No 63
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=26.07 E-value=1.8e+02 Score=23.37 Aligned_cols=28 Identities=21% Similarity=0.590 Sum_probs=21.2
Q ss_pred cccccceeEeEEeCCHHHHHHHhccCCCC
Q 010520 395 EELFAPVLYVMKFQTFEEAVKINNSVPQG 423 (508)
Q Consensus 395 ~E~fgPvl~v~~~~~~~eai~~~n~~~~g 423 (508)
.|..|- +.|+.++|+|||++++.+.++.
T Consensus 81 kE~lgG-~~iie~~s~deA~e~A~~~P~~ 108 (124)
T 1s7i_A 81 KEQLGG-FYLIEARDLNQALQIAAKIPPG 108 (124)
T ss_dssp SSEEEE-EEEEEESSHHHHHHHHTTCGGG
T ss_pred ccccee-EEEEEeCCHHHHHHHHHhCCcc
Confidence 355554 4567899999999999887653
No 64
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=24.30 E-value=54 Score=26.91 Aligned_cols=47 Identities=13% Similarity=0.070 Sum_probs=29.0
Q ss_pred CeEEEecCCh-hhHHHHHcCCCcCEEEEeCCHHHHHHHHHHhhhccCc
Q 010520 216 AIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK 262 (508)
Q Consensus 216 g~~~~v~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~ 262 (508)
|.+.+++|+. +.-..+.+.+++.+|++||+...-..+.+.|.+...|
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ip 100 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERGVP 100 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCC
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCCe
Confidence 5677776733 3222223225788999999877777777666655443
No 65
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=24.27 E-value=2e+02 Score=22.02 Aligned_cols=39 Identities=15% Similarity=0.238 Sum_probs=28.6
Q ss_pred HHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 010520 65 CSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLS 103 (508)
Q Consensus 65 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~ 103 (508)
++.....|..++.++|..+.......-+.+..++..--.
T Consensus 49 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~ 87 (102)
T 2co9_A 49 SKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRA 87 (102)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445556799999999999988887776666666555433
No 66
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.70 E-value=1.6e+02 Score=21.72 Aligned_cols=37 Identities=5% Similarity=0.093 Sum_probs=27.0
Q ss_pred HHHHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010520 63 KACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 63 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
+.++.....|..++.++|..+.......-+.+..++.
T Consensus 47 eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 47 EFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666779999999999988877776666655543
No 67
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=21.71 E-value=3.3e+02 Score=25.81 Aligned_cols=93 Identities=11% Similarity=-0.093 Sum_probs=63.0
Q ss_pred HHHHhhcCCEEEeeCCCCCh-hHHHHHHHHHHHHHHhCCCCCCeEEEecC-ChhhHHHHHcC-------CCcCEEEEeCC
Q 010520 175 ACIALVCGNCVVWKGAPTTP-LITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKD-------PRISLVSFTGS 245 (508)
Q Consensus 175 l~~ALaaGN~VVlkps~~~~-~~~~~l~~~l~~~l~~aGlP~g~~~~v~g-~~~~~~~L~~~-------~~v~~v~ftGs 245 (508)
+-.|=..+-+||+--|+.+. +....++..+..+.+++++|- ++.+=.| +.+.....++. |.+.-|.|-||
T Consensus 44 l~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~~VPV-aLHlDHg~~~e~i~~ai~~~~~~~~~~GFtSVMiDgS 122 (306)
T 3pm6_A 44 IRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAASVPI-TLHLDHAQDPEIIKRAADLSRSETHEPGFDSIMVDMS 122 (306)
T ss_dssp HHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHCSSCE-EEEEEEECCHHHHHHHHHTC------CCCSEEEECCT
T ss_pred HHHHHHhCCCEEEEcChhHHhhccHHHHHHHHHHHHHCCCCE-EEEcCCCCCHHHHHHHHHhhhhccCCCCCCEEEEeCC
Confidence 33567788899998776432 222344556677788899985 5565556 55555555554 58999999999
Q ss_pred HH-------HHHHHHHHhhhccCceeeccC
Q 010520 246 TK-------VGLMVQQTVHQRFGKCLLELS 268 (508)
Q Consensus 246 ~~-------~g~~i~~~a~~~~~~~~~elg 268 (508)
.. .-+.+.+.+.+....+=.|+|
T Consensus 123 ~~p~eENi~~Tk~vv~~ah~~gvsVEaElG 152 (306)
T 3pm6_A 123 HFSKEENLRLTRELVAYCNARGIATEAEPG 152 (306)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCeEEEEee
Confidence 73 455666677666777777777
No 68
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=21.55 E-value=1.6e+02 Score=22.03 Aligned_cols=35 Identities=11% Similarity=0.196 Sum_probs=25.8
Q ss_pred HHHHhHHhccCChhHHHHHHHHHHHHHHHhHHHHH
Q 010520 65 CSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (508)
Q Consensus 65 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
++.....|..++.++|..+.......-+.+..++.
T Consensus 39 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~ 73 (92)
T 2crj_A 39 TKMLGAEWSKLQPAEKQRYLDEAEKEKQQYLKELW 73 (92)
T ss_dssp HHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555679999999999988887776666654443
No 69
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=21.53 E-value=1.3e+02 Score=21.48 Aligned_cols=31 Identities=6% Similarity=0.075 Sum_probs=22.4
Q ss_pred HHHHhHHhccCChhHHHHHHHHHHHHHHHhH
Q 010520 65 CSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (508)
Q Consensus 65 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
++.....|..++.++|..........-+.+.
T Consensus 36 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~ 66 (76)
T 1hry_A 36 SKQLGYQWKMLTEAEKWPFFQEAQKLQAMHR 66 (76)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 4555667999999999888777665555443
No 70
>2xzm_K RPS14E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_K 3j0o_K 3j0l_K 2zkq_k 3iz6_K 3jyv_K*
Probab=21.11 E-value=1.7e+02 Score=24.65 Aligned_cols=56 Identities=13% Similarity=0.157 Sum_probs=42.8
Q ss_pred ecceEEEEeCCCCchhhhHHHHHHHhhcCCEEEeeCC----------CCChhHHHHHHHHHHHHHHhCCCCC
Q 010520 154 PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA----------PTTPLITIAITKLVSEVFERNKLPG 215 (508)
Q Consensus 154 P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps----------~~~~~~~~~l~~~l~~~l~~aGlP~ 215 (508)
..|++-+.+.+|+.+.++.. ..||.+++..| ..+|+.++..++.+.+.+.+.|+..
T Consensus 27 ~~gi~hI~asfNNTiVtiTD------~~G~~~~~~ssgg~~~k~~r~ksTpyAAq~aa~~~a~~a~e~Gi~~ 92 (151)
T 2xzm_K 27 VFGVCHIMATWNDTFIHVTD------LSGRETLVRVTGGMKVKADREESSPYAAMQAAIDVVNRCKELKINA 92 (151)
T ss_dssp CEEEEEEEBCSSCBCCEEEC------TTCCSEEEECCHHHHCSSGGGGSCHHHHHHHHHHHHHHHHHHTCCE
T ss_pred eeeEEEEEccCCCEEEEEEC------CCCCEEEEEecCcceEeCCCCcCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 45999999999999877665 24776666544 6789999888877777778888854
Done!