Citrus Sinensis ID: 010522

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------51
MALSLSLFTRLVLLCWFTTSLLLCNGFPAAFHPHHHHPHFAKHNYRDALTKSIIFFEGQRSGKLPPNQRMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELRNAREAIRWATDYLLKATVHPDTIYVQVGDANKDHACWERPEDMDTPRTVIKIDRNYPGSDVAGETAAALAAASLVFRRSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKKFVCPFYCSYSGYQDELLWGAAWLHKATRNPTYLNYIQVNGQILGAAEYDNTFGWDNKHVGARILLSKAFLVQKLQSLHEYKDHADNFICSLIPGASFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVDYILGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSVGAHPARIQCSSGFSIMKSQSPNPNVLVGAIVGGPDQHDRFPDERPDYEQSEPSTYMNAPLVGALAYLAHSFGQL
cccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccccEEcccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccccccccccccEEccccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHcccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccHHHHHHHHHHHHHHccc
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHEcEcccccccEcccccEcccccccccccccccEcccccccEEHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccEccEEEEEEccHHHHHcccccHHHccccccEEEEEccEccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHccHHHcccHHccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcHHHccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccEEEccccEEEEcccccHHHHHHHHHHHHHHHHHHHHcccEEEcccccHHHHHHHHHHHHHHHHHHcccccccccEcccccccccccEcHHHHccccccccccEcccccHHHHcccccccccccccEccccccccccccccccHHHHEccHHHHHHHHHHHHHHHHHHccc
MALSLSLFTRLVLLCWFTTSlllcngfpaafhphhhhphfakhnyrdalTKSIiffegqrsgklppnqrmtwrrdsgltdgaAMHVDLVGgyydagdnvkfgfpmAFTTTMLSWSVIEFGGLMKGELRNAREAIRWATDYLLKatvhpdtiyvqvgdankdhacwerpedmdtprtvikidrnypgsdvaGETAAALAAASLVfrrsdptysKLLVRRAIRVFQFADKYRGaysnglkkfvcpfycsysgyqdELLWGAAWLHkatrnptylnYIQVNGQILGaaeydntfgwdnkhVGARILLSKAFLVQKLQSLHEykdhadnficslipgasfssaqytpggllfkmsdsnmqyVTSTSFLLLTYAKYLTSAhrvvncggttVTAKRLRTIAKRQVDyilgdnplkmsymvgygprypqrihhrgsslpsvgahpariqcssgfsimksqspnpnvlvgaivggpdqhdrfpderpdyeqsepstymnapLVGALAYLAHSFGQL
MALSLSLFTRLVLLCWFTTSLLLCNGFPAAFHPHHHHPHFAKHNYRDALTKSIIFFegqrsgklppnqrMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELRNAREAIRWATDYLLKATVHPDTIYVQVGDANKDHAcwerpedmdtprtVIKIDRNYPGSDVAGETAAALAAASlvfrrsdptyskLLVRRAIRVFQFADKYRGAYSNGLKKFVCPFYCSYSGYQDELLWGAAWLHKATRNPTYLNYIQVNGQILGAAEYDNTFGWDNKHVGARILLSKAFLVQKLQSLHEYKDHADNFICSLIPGASFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSahrvvncggttvtakrlrtiakrqvdyilgdnplKMSYMVGYGPRYPQRIHHRGSSLPSVGAHPARIQCSSGFSIMKSQSPNPNVLVGAIVGGPDQHDRFPDERPDYEQSEPSTYMNAPLVGALAYLAHSFGQL
MAlslslftrlvllCWFTTSLLLCNGfpaafhphhhhphfaKHNYRDALTKSIIFFEGQRSGKLPPNQRMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELRNAREAIRWATDYLLKATVHPDTIYVQVGDANKDHACWERPEDMDTPRTVIKIDRNYPGSDVAGETaaalaaaSLVFRRSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKKFVCPFYCSYSGYQDELLWGAAWLHKATRNPTYLNYIQVNGQILGAAEYDNTFGWDNKHVGARILLSKAFLVQKLQSLHEYKDHADNFICSLIPGASFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVDYILGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSVGAHPARIQCSSGFSIMKSQSPNPNVLVGAIVGGPDQHDRFPDERPDYEQSEPSTYMNAPLVGALAYLAHSFGQL
********************************************YRDALTKSIIFFE**************WRRDSGLTDGAAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELRNAREAIRWATDYLLKATVHPDTIYVQVGDANKDHACWERPE*MDTPRTVIKIDRNYPGSDVAGETAAALAAASLVFRRSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKKFVCPFYCSYSGYQDELLWGAAWLHKATRNPTYLNYIQVNGQILGAAEYDNTFGWDNKHVGARILLSKAFLVQKLQSLHEYKDHADNFICSLIPGASFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVDYILGDNPLKMSYMVGYGPRYPQRI***********************************LVGAI***************************APLVGALAYLAH*****
*****SLFTRLVLLCWFTTSLLLCNGFPAAFHPHHHHPHFAKHNYRDALTKSIIFFEGQRSGKLPPNQRMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELRNAREAIRWATDYLLKATVHPDTIYVQVGDANKDHACWERPEDMDTPRTVIKIDRNYPGSDVAGETAAALAAASLVFRRSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKKFVCPFYCSYSGYQDELLWGAAWLHKATRNPTYLNYIQVNGQILGAAEYDNTFGWDNKHVGARILLSKAFLVQKLQSLHEYKDHADNFICSLIPGASFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVDYILGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSVGAHPARIQCSSGFSIMKSQSPNPNVLVGAIVGGPDQHDRFPDERPDYEQSEPSTYMNAPLVGALAYLAHSFG**
MALSLSLFTRLVLLCWFTTSLLLCNGFPAAFHPHHHHPHFAKHNYRDALTKSIIFFEGQRSGKLPPNQRMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELRNAREAIRWATDYLLKATVHPDTIYVQVGDANKDHACWERPEDMDTPRTVIKIDRNYPGSDVAGETAAALAAASLVFRRSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKKFVCPFYCSYSGYQDELLWGAAWLHKATRNPTYLNYIQVNGQILGAAEYDNTFGWDNKHVGARILLSKAFLVQKLQSLHEYKDHADNFICSLIPGASFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVDYILGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSVGAHPARIQCSSGFSIMKSQSPNPNVLVGAIVGGPDQHDRFP**********PSTYMNAPLVGALAYLAHSFGQL
*ALSLSLFTRLVLLCWFTTSLLLCNGFPAAFHPHHHHPHFAKHNYRDALTKSIIFFEGQRSGKLPPNQRMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELRNAREAIRWATDYLLKATVHPDTIYVQVGDANKDHACWERPEDMDTPRTVIKIDRNYPGSDVAGETAAALAAASLVFRRSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKKFVCPFYCSYSGYQDELLWGAAWLHKATRNPTYLNYIQVNGQILGAAEYDNTFGWDNKHVGARILLSKAFLVQKLQSLHEYKDHADNFICSLIPGASFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVDYILGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSVGAHPARIQCSSGFSIMKSQSPNPNVLVGAIVGGPDQHDRFPDERPDYEQSEPSTYMNAPLVGALAYLAHSFGQL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MALSLSLFTRLVLLCWFTTSLLLCNGFPAAFHPHHHHPHFAKHNYRDALTKSIIFFEGQRSGKLPPNQRMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELRNAREAIRWATDYLLKATVHPDTIYVQVGDANKDHACWERPEDMDTPRTVIKIDRNYPGSDVAGETAAALAAASLVFRRSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKKFVCPFYCSYSGYQDELLWGAAWLHKATRNPTYLNYIQVNGQILGAAEYDNTFGWDNKHVGARILLSKAFLVQKLQSLHEYKDHADNFICSLIPGASFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVDYILGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSVGAHPARIQCSSGFSIMKSQSPNPNVLVGAIVGGPDQHDRFPDERPDYEQSEPSTYMNAPLVGALAYLAHSFGQL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query508 2.2.26 [Sep-21-2011]
O81416516 Endoglucanase 17 OS=Arabi yes no 0.972 0.957 0.788 0.0
Q9SRX3501 Endoglucanase 1 OS=Arabid no no 0.982 0.996 0.758 0.0
Q8LQ92499 Endoglucanase 3 OS=Oryza yes no 0.972 0.989 0.716 0.0
P05522494 Endoglucanase 1 OS=Persea N/A no 0.901 0.927 0.664 0.0
Q9CAC1492 Endoglucanase 8 OS=Arabid no no 0.913 0.943 0.653 1e-178
Q6YXT7523 Endoglucanase 19 OS=Oryza no no 0.903 0.877 0.630 1e-177
O49296489 Endoglucanase 4 OS=Arabid no no 0.911 0.946 0.637 1e-176
Q652F9497 Endoglucanase 17 OS=Oryza no no 0.907 0.927 0.645 1e-175
Q6Z2J3508 Endoglucanase 6 OS=Oryza no no 0.909 0.909 0.647 1e-173
Q69NF5515 Endoglucanase 23 OS=Oryza no no 0.903 0.891 0.619 1e-168
>sp|O81416|GUN17_ARATH Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1 Back     alignment and function desciption
 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/502 (78%), Positives = 447/502 (89%), Gaps = 8/502 (1%)

Query: 12  VLLCWFTTSLLLCNGFP-----AAFHPHHHHPHFAKHNYRDALTKSIIFFEGQRSGKLPP 66
           + L +F     LCNGF      + F+ HHH  H AKHNY+DALTKSI+FFEGQRSGKLP 
Sbjct: 18  IFLSFF---FFLCNGFSYPTTSSLFNTHHHRHHLAKHNYKDALTKSILFFEGQRSGKLPS 74

Query: 67  NQRMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGE 126
           NQRM+WRRDSGL+DG+A+HVDLVGGYYDAGDN+KFGFPMAFTTTMLSWSVIEFGGLMK E
Sbjct: 75  NQRMSWRRDSGLSDGSALHVDLVGGYYDAGDNIKFGFPMAFTTTMLSWSVIEFGGLMKSE 134

Query: 127 LRNAREAIRWATDYLLKATVHPDTIYVQVGDANKDHACWERPEDMDTPRTVIKIDRNYPG 186
           L+NA+ AIRWATDYLLKAT  PDTIYVQVGDANKDH+CWERPEDMDT R+V K+D+N PG
Sbjct: 135 LQNAKIAIRWATDYLLKATSQPDTIYVQVGDANKDHSCWERPEDMDTVRSVFKVDKNIPG 194

Query: 187 SDVAGETAAALAAASLVFRRSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKKFVCPFYC 246
           SDVA ETAAALAAA++VFR+SDP+YSK+L++RAI VF FADKYRG YS GLK  VCPFYC
Sbjct: 195 SDVAAETAAALAAAAIVFRKSDPSYSKVLLKRAISVFAFADKYRGTYSAGLKPDVCPFYC 254

Query: 247 SYSGYQDELLWGAAWLHKATRNPTYLNYIQVNGQILGAAEYDNTFGWDNKHVGARILLSK 306
           SYSGYQDELLWGAAWL KAT+N  YLNYI++NGQILGAAEYDNTFGWDNKH GARILL+K
Sbjct: 255 SYSGYQDELLWGAAWLQKATKNIKYLNYIKINGQILGAAEYDNTFGWDNKHAGARILLTK 314

Query: 307 AFLVQKLQSLHEYKDHADNFICSLIPGASFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLL 366
           AFLVQ +++LHEYK HADNFICS+IPGA FSS QYTPGGLLFKM+D+NMQYVTSTSFLLL
Sbjct: 315 AFLVQNVKTLHEYKGHADNFICSVIPGAPFSSTQYTPGGLLFKMADANMQYVTSTSFLLL 374

Query: 367 TYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVDYILGDNPLKMSYMVGYGPRYPQRIHH 426
           TYAKYLTSA  VV+CGG+  T  RLR+IAKRQVDY+LGDNPL+MSYMVGYGP++P+RIHH
Sbjct: 375 TYAKYLTSAKTVVHCGGSVYTPGRLRSIAKRQVDYLLGDNPLRMSYMVGYGPKFPRRIHH 434

Query: 427 RGSSLPSVGAHPARIQCSSGFSIMKSQSPNPNVLVGAIVGGPDQHDRFPDERPDYEQSEP 486
           RGSSLP V +HPA+IQC  GF+IM SQSPNPN LVGA+VGGPDQHDRFPDER DYEQSEP
Sbjct: 435 RGSSLPCVASHPAKIQCHQGFAIMNSQSPNPNFLVGAVVGGPDQHDRFPDERSDYEQSEP 494

Query: 487 STYMNAPLVGALAYLAHSFGQL 508
           +TY+N+PLVGALAY AH++GQL
Sbjct: 495 ATYINSPLVGALAYFAHAYGQL 516

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q9SRX3|GUN1_ARATH Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1 Back     alignment and function description
>sp|Q8LQ92|GUN3_ORYSJ Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1 Back     alignment and function description
>sp|P05522|GUN1_PERAE Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 SV=1 Back     alignment and function description
>sp|Q9CAC1|GUN8_ARATH Endoglucanase 8 OS=Arabidopsis thaliana GN=CEL1 PE=2 SV=1 Back     alignment and function description
>sp|Q6YXT7|GUN19_ORYSJ Endoglucanase 19 OS=Oryza sativa subsp. japonica GN=Os08g0114200 PE=2 SV=1 Back     alignment and function description
>sp|O49296|GUN4_ARATH Endoglucanase 4 OS=Arabidopsis thaliana GN=At1g23210 PE=2 SV=1 Back     alignment and function description
>sp|Q652F9|GUN17_ORYSJ Endoglucanase 17 OS=Oryza sativa subsp. japonica GN=GLU13 PE=2 SV=1 Back     alignment and function description
>sp|Q6Z2J3|GUN6_ORYSJ Endoglucanase 6 OS=Oryza sativa subsp. japonica GN=Os02g0733300 PE=2 SV=1 Back     alignment and function description
>sp|Q69NF5|GUN23_ORYSJ Endoglucanase 23 OS=Oryza sativa subsp. japonica GN=GLU12 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query508
224064460520 glycosyl hydrolase family 9 [Populus tri 1.0 0.976 0.861 0.0
225437426511 PREDICTED: endoglucanase 17 [Vitis vinif 0.962 0.956 0.864 0.0
224131088510 predicted protein [Populus trichocarpa] 0.998 0.994 0.864 0.0
347466575489 endo-1,4-beta-glucanase [Populus trichoc 0.917 0.952 0.899 0.0
356536709505 PREDICTED: endoglucanase 17-like [Glycin 0.994 1.0 0.840 0.0
255564234510 endo-1,4-beta-glucanase, putative [Ricin 0.927 0.923 0.887 0.0
356500307507 PREDICTED: endoglucanase 17-like [Glycin 0.954 0.956 0.858 0.0
356505596500 PREDICTED: endoglucanase 17-like [Glycin 0.937 0.952 0.846 0.0
449436461498 PREDICTED: endoglucanase 17-like isoform 0.938 0.957 0.838 0.0
6009979506 endo-1,4-beta-glucanase [Pisum sativum] 0.935 0.938 0.84 0.0
>gi|224064460|ref|XP_002301487.1| glycosyl hydrolase family 9 [Populus trichocarpa] gi|222843213|gb|EEE80760.1| glycosyl hydrolase family 9 [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  902 bits (2331), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/511 (86%), Positives = 470/511 (91%), Gaps = 3/511 (0%)

Query: 1   MALSLSLFTRLVLLCWFTTSLLLCNGFPAAFH-PHHH--HPHFAKHNYRDALTKSIIFFE 57
           MA +   FT LVL   F TS + C+GFP   + P HH  HP FA HNYRDALTKSI+FFE
Sbjct: 1   MACANFSFTFLVLCSCFATSFIACHGFPVHHNNPFHHRRHPRFASHNYRDALTKSILFFE 60

Query: 58  GQRSGKLPPNQRMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVI 117
           GQRSGKLP +QRMTWRRDSGLTDG+ MHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSV+
Sbjct: 61  GQRSGKLPSSQRMTWRRDSGLTDGSTMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVL 120

Query: 118 EFGGLMKGELRNAREAIRWATDYLLKATVHPDTIYVQVGDANKDHACWERPEDMDTPRTV 177
           EFGGLMKGEL+NAREAIRWATDYLLKAT H DTIYVQVG+ANKDHACWERPEDMDTPR+V
Sbjct: 121 EFGGLMKGELQNAREAIRWATDYLLKATAHTDTIYVQVGNANKDHACWERPEDMDTPRSV 180

Query: 178 IKIDRNYPGSDVAGETAAALAAASLVFRRSDPTYSKLLVRRAIRVFQFADKYRGAYSNGL 237
            K+D++ PGSDVA ETAAALAAASLVFRR DPTY+KLLVRRAIRVFQFADKYRGAYSNGL
Sbjct: 181 FKVDKHSPGSDVAAETAAALAAASLVFRRCDPTYAKLLVRRAIRVFQFADKYRGAYSNGL 240

Query: 238 KKFVCPFYCSYSGYQDELLWGAAWLHKATRNPTYLNYIQVNGQILGAAEYDNTFGWDNKH 297
           K+FVCPFYCSYSGY+DELLWGAAWLHKAT+NPTYLNYIQVNGQ LGAA++DNTFGWDNKH
Sbjct: 241 KRFVCPFYCSYSGYEDELLWGAAWLHKATKNPTYLNYIQVNGQNLGAAQFDNTFGWDNKH 300

Query: 298 VGARILLSKAFLVQKLQSLHEYKDHADNFICSLIPGASFSSAQYTPGGLLFKMSDSNMQY 357
           VGARILLSKAFLVQKLQSLH+YK HADNFICSLIPGA FSSAQYTPGGLLFKMSDSNMQY
Sbjct: 301 VGARILLSKAFLVQKLQSLHDYKGHADNFICSLIPGAPFSSAQYTPGGLLFKMSDSNMQY 360

Query: 358 VTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVDYILGDNPLKMSYMVGYG 417
           VTSTSFLLLTYAKYLTSA  VVNCGGT VT KRLRTIAK+QVDY+LGDNPLKMSYMVGYG
Sbjct: 361 VTSTSFLLLTYAKYLTSARTVVNCGGTVVTPKRLRTIAKKQVDYLLGDNPLKMSYMVGYG 420

Query: 418 PRYPQRIHHRGSSLPSVGAHPARIQCSSGFSIMKSQSPNPNVLVGAIVGGPDQHDRFPDE 477
           PRYPQRIHHRGSSLPS+  HP +IQC+SGFS+M SQSPNPNVLVGAIVGGPD+HDRFPDE
Sbjct: 421 PRYPQRIHHRGSSLPSIATHPGKIQCTSGFSVMNSQSPNPNVLVGAIVGGPDEHDRFPDE 480

Query: 478 RPDYEQSEPSTYMNAPLVGALAYLAHSFGQL 508
           R DYEQSEP+TY+NAPLVGALAYLAHS GQL
Sbjct: 481 RSDYEQSEPATYINAPLVGALAYLAHSSGQL 511

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225437426|ref|XP_002271736.1| PREDICTED: endoglucanase 17 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224131088|ref|XP_002320998.1| predicted protein [Populus trichocarpa] gi|222861771|gb|EEE99313.1| predicted protein [Populus trichocarpa] gi|347466573|gb|AEO97199.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466627|gb|AEO97226.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|347466575|gb|AEO97200.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466629|gb|AEO97227.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356536709|ref|XP_003536878.1| PREDICTED: endoglucanase 17-like [Glycine max] Back     alignment and taxonomy information
>gi|255564234|ref|XP_002523114.1| endo-1,4-beta-glucanase, putative [Ricinus communis] gi|223537676|gb|EEF39299.1| endo-1,4-beta-glucanase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356500307|ref|XP_003518974.1| PREDICTED: endoglucanase 17-like [Glycine max] Back     alignment and taxonomy information
>gi|356505596|ref|XP_003521576.1| PREDICTED: endoglucanase 17-like [Glycine max] Back     alignment and taxonomy information
>gi|449436461|ref|XP_004136011.1| PREDICTED: endoglucanase 17-like isoform 1 [Cucumis sativus] Back     alignment and taxonomy information
>gi|6009979|dbj|BAA85150.1| endo-1,4-beta-glucanase [Pisum sativum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query508
TAIR|locus:2137824516 GH9B13 "glycosyl hydrolase 9B1 0.919 0.905 0.805 1.1e-215
TAIR|locus:2024670501 CEL2 "cellulase 2" [Arabidopsi 0.948 0.962 0.748 2.7e-203
TAIR|locus:2033600492 GH9B1 "glycosyl hydrolase 9B1" 0.909 0.939 0.639 2.1e-164
TAIR|locus:2028015489 GH9B6 "glycosyl hydrolase 9B6" 0.907 0.942 0.625 8.4e-161
TAIR|locus:2017704484 CEL5 "cellulase 5" [Arabidopsi 0.899 0.944 0.580 1.1e-151
TAIR|locus:2825314484 CEL3 "cellulase 3" [Arabidopsi 0.895 0.940 0.571 1.9e-147
TAIR|locus:2120242497 GH9B18 "glycosyl hydrolase 9B1 0.915 0.935 0.569 3.1e-147
TAIR|locus:2120232493 GH9B17 "glycosyl hydrolase 9B1 0.901 0.929 0.528 7.2e-139
TAIR|locus:2128394479 GH9B15 "glycosyl hydrolase 9B1 0.891 0.945 0.520 1.9e-131
TAIR|locus:2118519478 GH9B14 "glycosyl hydrolase 9B1 0.889 0.945 0.519 1e-130
TAIR|locus:2137824 GH9B13 "glycosyl hydrolase 9B13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2084 (738.7 bits), Expect = 1.1e-215, P = 1.1e-215
 Identities = 376/467 (80%), Positives = 423/467 (90%)

Query:    42 KHNYRDALTKSIIFFEGQRSGKLPPNQRMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKF 101
             KHNY+DALTKSI+FFEGQRSGKLP NQRM+WRRDSGL+DG+A+HVDLVGGYYDAGDN+KF
Sbjct:    50 KHNYKDALTKSILFFEGQRSGKLPSNQRMSWRRDSGLSDGSALHVDLVGGYYDAGDNIKF 109

Query:   102 GFPMAFTTTMLSWSVIEFGGLMKGELRNAREAIRWATDYLLKATVHPDTIYVQVGDANKD 161
             GFPMAFTTTMLSWSVIEFGGLMK EL+NA+ AIRWATDYLLKAT  PDTIYVQVGDANKD
Sbjct:   110 GFPMAFTTTMLSWSVIEFGGLMKSELQNAKIAIRWATDYLLKATSQPDTIYVQVGDANKD 169

Query:   162 HACWERPEDMDTPRTVIKIDRNYPGSDVAGETXXXXXXXSLVFRRSDPTYSKLLVRRAIR 221
             H+CWERPEDMDT R+V K+D+N PGSDVA ET       ++VFR+SDP+YSK+L++RAI 
Sbjct:   170 HSCWERPEDMDTVRSVFKVDKNIPGSDVAAETAAALAAAAIVFRKSDPSYSKVLLKRAIS 229

Query:   222 VFQFADKYRGAYSNGLKKFVCPFYCSYSGYQDELLWGAAWLHKATRNPTYLNYIQVNGQI 281
             VF FADKYRG YS GLK  VCPFYCSYSGYQDELLWGAAWL KAT+N  YLNYI++NGQI
Sbjct:   230 VFAFADKYRGTYSAGLKPDVCPFYCSYSGYQDELLWGAAWLQKATKNIKYLNYIKINGQI 289

Query:   282 LGAAEYDNTFGWDNKHVGARILLSKAFLVQKLQSLHEYKDHADNFICSLIPGASFSSAQY 341
             LGAAEYDNTFGWDNKH GARILL+KAFLVQ +++LHEYK HADNFICS+IPGA FSS QY
Sbjct:   290 LGAAEYDNTFGWDNKHAGARILLTKAFLVQNVKTLHEYKGHADNFICSVIPGAPFSSTQY 349

Query:   342 TPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVDY 401
             TPGGLLFKM+D+NMQYVTSTSFLLLTYAKYLTSA  VV+CGG+  T  RLR+IAKRQVDY
Sbjct:   350 TPGGLLFKMADANMQYVTSTSFLLLTYAKYLTSAKTVVHCGGSVYTPGRLRSIAKRQVDY 409

Query:   402 ILGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSVGAHPARIQCSSGFSIMKSQSPNPNVLV 461
             +LGDNPL+MSYMVGYGP++P+RIHHRGSSLP V +HPA+IQC  GF+IM SQSPNPN LV
Sbjct:   410 LLGDNPLRMSYMVGYGPKFPRRIHHRGSSLPCVASHPAKIQCHQGFAIMNSQSPNPNFLV 469

Query:   462 GAIVGGPDQHDRFPDERPDYEQSEPSTYMNAPLVGALAYLAHSFGQL 508
             GA+VGGPDQHDRFPDER DYEQSEP+TY+N+PLVGALAY AH++GQL
Sbjct:   470 GAVVGGPDQHDRFPDERSDYEQSEPATYINSPLVGALAYFAHAYGQL 516
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0010089 "xylem development" evidence=RCA
GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA
TAIR|locus:2024670 CEL2 "cellulase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2033600 GH9B1 "glycosyl hydrolase 9B1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028015 GH9B6 "glycosyl hydrolase 9B6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017704 CEL5 "cellulase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825314 CEL3 "cellulase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120242 GH9B18 "glycosyl hydrolase 9B18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120232 GH9B17 "glycosyl hydrolase 9B17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128394 GH9B15 "glycosyl hydrolase 9B15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118519 GH9B14 "glycosyl hydrolase 9B14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8LQ92GUN3_ORYSJ3, ., 2, ., 1, ., 40.7160.97240.9899yesno
P22503GUN_PHAVU3, ., 2, ., 1, ., 40.53010.88770.9092N/Ano
Q9SRX3GUN1_ARATH3, ., 2, ., 1, ., 40.75880.98220.9960nono
P05522GUN1_PERAE3, ., 2, ., 1, ., 40.66440.90150.9271N/Ano
O81416GUN17_ARATH3, ., 2, ., 1, ., 40.78880.97240.9573yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.979
3rd Layer3.2.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00028035001
SubName- Full=Chromosome chr7 scaffold_42, whole genome shotgun sequence; (511 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query508
PLN02266510 PLN02266, PLN02266, endoglucanase 0.0
PLN02308492 PLN02308, PLN02308, endoglucanase 0.0
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 0.0
PLN03009495 PLN03009, PLN03009, cellulase 0.0
PLN02613498 PLN02613, PLN02613, endoglucanase 0.0
PLN02175484 PLN02175, PLN02175, endoglucanase 0.0
PLN02171 629 PLN02171, PLN02171, endoglucanase 0.0
PLN00119489 PLN00119, PLN00119, endoglucanase 0.0
PLN02909486 PLN02909, PLN02909, Endoglucanase 0.0
PLN02420525 PLN02420, PLN02420, endoglucanase 1e-179
PLN02340 614 PLN02340, PLN02340, endoglucanase 1e-178
PLN02345469 PLN02345, PLN02345, endoglucanase 1e-173
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information 
 Score = 1046 bits (2707), Expect = 0.0
 Identities = 439/511 (85%), Positives = 465/511 (90%), Gaps = 5/511 (0%)

Query: 2   ALSLSLFTRLVLLCWFTTSLLLCNGFPA----AFHPHHHHPHFAKHNYRDALTKSIIFFE 57
                  T L L  +   SLLLCNGF +     FH H HHP  A HNYRDALTKSI+FFE
Sbjct: 1   LSMALSSTLLRLFIFLAFSLLLCNGFSSSSNNPFH-HRHHPRLASHNYRDALTKSILFFE 59

Query: 58  GQRSGKLPPNQRMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVI 117
           GQRSGKLP +QRMTWRRDSGL+DG+AMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVI
Sbjct: 60  GQRSGKLPSSQRMTWRRDSGLSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVI 119

Query: 118 EFGGLMKGELRNAREAIRWATDYLLKATVHPDTIYVQVGDANKDHACWERPEDMDTPRTV 177
           EFGGLMK EL+NA++AIRWATDYLLKAT HPDTIYVQVGDANKDHACWERPEDMDTPR+V
Sbjct: 120 EFGGLMKSELQNAKDAIRWATDYLLKATAHPDTIYVQVGDANKDHACWERPEDMDTPRSV 179

Query: 178 IKIDRNYPGSDVAGETAAALAAASLVFRRSDPTYSKLLVRRAIRVFQFADKYRGAYSNGL 237
            K+D+N PGSDVA ETAAALAAASLVFR+SDPTYSKLLVRRAIRVFQFADKYRGAYSNGL
Sbjct: 180 FKVDKNTPGSDVAAETAAALAAASLVFRKSDPTYSKLLVRRAIRVFQFADKYRGAYSNGL 239

Query: 238 KKFVCPFYCSYSGYQDELLWGAAWLHKATRNPTYLNYIQVNGQILGAAEYDNTFGWDNKH 297
           K  VCPFYCSYSGYQDELLWGAAWLHKAT+NPTYLNYIQVNGQILGA E+DNTFGWDNKH
Sbjct: 240 KPDVCPFYCSYSGYQDELLWGAAWLHKATKNPTYLNYIQVNGQILGADEFDNTFGWDNKH 299

Query: 298 VGARILLSKAFLVQKLQSLHEYKDHADNFICSLIPGASFSSAQYTPGGLLFKMSDSNMQY 357
           VGARILLSKAFLVQK+QSLHEYK HADNFICS+IPGA FSS QYTPGGLLFKMSDSNMQY
Sbjct: 300 VGARILLSKAFLVQKVQSLHEYKGHADNFICSVIPGAPFSSTQYTPGGLLFKMSDSNMQY 359

Query: 358 VTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVDYILGDNPLKMSYMVGYG 417
           VTSTSFLLLTYAKYLTSA  VVNCGGT VT  RLR+IAK+QVDY+LGDNPLKMSYMVGYG
Sbjct: 360 VTSTSFLLLTYAKYLTSAKTVVNCGGTVVTPARLRSIAKKQVDYLLGDNPLKMSYMVGYG 419

Query: 418 PRYPQRIHHRGSSLPSVGAHPARIQCSSGFSIMKSQSPNPNVLVGAIVGGPDQHDRFPDE 477
           PRYP+RIHHRGSSLPSV AHPA+IQCS GFSIM SQSPNPNVLVGA+VGGPDQHDRFPDE
Sbjct: 420 PRYPRRIHHRGSSLPSVAAHPAKIQCSQGFSIMNSQSPNPNVLVGAVVGGPDQHDRFPDE 479

Query: 478 RPDYEQSEPSTYMNAPLVGALAYLAHSFGQL 508
           R DYEQSEP+TY+NAPLVGALAYLAHS+GQL
Sbjct: 480 RSDYEQSEPATYINAPLVGALAYLAHSYGQL 510

Length = 510
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 508
PLN02266510 endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02340 614 endoglucanase 100.0
PLN02909486 Endoglucanase 100.0
PLN02420525 endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN02171 629 endoglucanase 100.0
PLN03009495 cellulase 100.0
PLN02613498 endoglucanase 100.0
PLN02345469 endoglucanase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 97.44
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 96.23
KOG2787403 consensus Lanthionine synthetase C-like protein 1 95.83
COG1331667 Highly conserved protein containing a thioredoxin 95.28
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 95.18
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 94.78
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 90.93
COG3533 589 Uncharacterized protein conserved in bacteria [Fun 90.18
cd02892634 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; 85.09
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 81.12
>PLN02266 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=3.4e-131  Score=1047.69  Aligned_cols=497  Identities=88%  Similarity=1.419  Sum_probs=461.1

Q ss_pred             HHHHHHHHHHHHhcCCCCcc----ccCCCCCCCCCchhHHHHHHHHHHHHHHhhcCCCCCCCCCCcccCCCCCCCCCccc
Q 010522           11 LVLLCWFTTSLLLCNGFPAA----FHPHHHHPHFAKHNYRDALTKSIIFFEGQRSGKLPPNQRMTWRRDSGLTDGAAMHV   86 (508)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Y~~~l~~sl~fy~~QR~G~lp~~~~~~wr~~s~l~Dg~~~~~   86 (508)
                      |-|...++.|||||+|++..    ||-+ |++.+.+++|.++|++||+||++||||++|+.++++||+++++.||++.++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~~aL~~sl~fy~~QRsG~lp~~~~~~Wr~ds~~~Dg~~~~~   88 (510)
T PLN02266         10 LRLFIFLAFSLLLCNGFSSSSNNPFHHR-HHPRLASHNYRDALTKSILFFEGQRSGKLPSSQRMTWRRDSGLSDGSAMHV   88 (510)
T ss_pred             HHHHHHHHHHHHhcCCCccccCCccccc-CCCCCCcchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccCCCCCCCcCcc
Confidence            34556778899999998753    4433 457788899999999999999999999999999999999999999999999


Q ss_pred             ccccceecCCCCcccccchHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCCCCCCCC
Q 010522           87 DLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELRNAREAIRWATDYLLKATVHPDTIYVQVGDANKDHACWE  166 (508)
Q Consensus        87 dlsGGW~DAGD~~Ky~~~~a~s~~~L~wa~~~~~~~~~~~~~dlLde~kwg~D~llk~~~~~g~~y~~Vg~~~~dh~~w~  166 (508)
                      ||+|||||||||+||++|+|+++++|+|+++||++.+.+++||||||||||+|||||||+.+|.||+|||++.+||.+|+
T Consensus        89 DlsGGwyDAGD~~Kf~~p~a~s~t~L~w~~~ef~~~~~~~~pd~Ldelkw~~D~llk~~~~~~~vy~qVg~~~~Dh~~W~  168 (510)
T PLN02266         89 DLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKSELQNAKDAIRWATDYLLKATAHPDTIYVQVGDANKDHACWE  168 (510)
T ss_pred             cCCCcceeCCCCceecchHHHHHHHHHHHHHhhhhccccccHHHHHHHHHHHHHHHHhccCCCeEEEEeCCCCCCcccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCceEEEcCCCCCchHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCcccccCC
Q 010522          167 RPEDMDTPRTVIKIDRNYPGSDVAGETAAALAAASLVFRRSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKKFVCPFYC  246 (508)
Q Consensus       167 ~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vf~~~D~~~A~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~  246 (508)
                      +||+++.+|++|.++.++|||++++++|||||+||||||++||+||++||++||++|+||+++|+.|.+.+.....++|.
T Consensus       169 ~Pe~~~~~R~~y~i~~~~pgsd~a~e~AAALAaas~vfk~~D~~yA~~~L~~Ak~ly~fa~~~~g~y~~~~~~~~~~~y~  248 (510)
T PLN02266        169 RPEDMDTPRSVFKVDKNTPGSDVAAETAAALAAASLVFRKSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKPDVCPFYC  248 (510)
T ss_pred             ChhhcCCCCeeEEeCCCCCchHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCcccCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999997764333568898


Q ss_pred             CCCCchhHHHHHHHHHHHHcCCchHHHHHHHhhhhhcCCCCCCccCccchhHHHHHHhhhhhhhhhhhHHHHHHHHHHHH
Q 010522          247 SYSGYQDELLWGAAWLHKATRNPTYLNYIQVNGQILGAAEYDNTFGWDNKHVGARILLSKAFLVQKLQSLHEYKDHADNF  326 (508)
Q Consensus       247 s~~~~~De~~wAA~~Ly~aTg~~~Y~~~~~~~~~~~~~~~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~  326 (508)
                      +.+++.||++|||+|||++|||++|+++++...+.++.....+.++||++..++.++|++.+..+..+.+..|++.++.+
T Consensus       249 s~s~~~DEl~WAAawLy~ATGd~~Yl~~~~~~~~~~g~~~~~~~~~WD~k~~ga~vLLa~~~~~~~~~~~~~yk~~~d~~  328 (510)
T PLN02266        249 SYSGYQDELLWGAAWLHKATKNPTYLNYIQVNGQILGADEFDNTFGWDNKHVGARILLSKAFLVQKVQSLHEYKGHADNF  328 (510)
T ss_pred             cCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHhhccccccCCccCcchhHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Confidence            76889999999999999999999999999887665654334578999999999999998854333345678899999999


Q ss_pred             HhhhcCCCCCCCcccCCCCcccccCCChHHHHHHHHHHHHHHHHHHhhcccccccCCcccchHHHHHHHHhcccccccCC
Q 010522          327 ICSLIPGASFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVDYILGDN  406 (508)
Q Consensus       327 ~~~~~~~~~~~~~~~t~~g~~w~~~w~n~~~a~~~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~N  406 (508)
                      +|.+++++|+..+++||+|+.|..+|+|+||+++++||+++|+|++..+..++.||+......+|+++|++|||||||+|
T Consensus       329 ~~~~~~~~~~~~~~~TpGGL~~~~~wg~lrYa~~~afla~vya~~l~~~~~~~~cg~~~~~~~~~~~fA~~QidYiLG~N  408 (510)
T PLN02266        329 ICSVIPGAPFSSTQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAKTVVNCGGTVVTPARLRSIAKKQVDYLLGDN  408 (510)
T ss_pred             HHhccCCCCCCccccCCCeeEEeCCCCcHHHHHHHHHHHHHHHHHHHhcCCceecCCCccCHHHHHHHHHhhhceeccCC
Confidence            99999988877889999999999999999999999999999999998777788899877888999999999999999999


Q ss_pred             CCCCceEeeeCCCCCCCcccCCCCCCCCCCCCCccccCCCcccccCCCCCCCCccceeecCCCCCCCCCCCCCCcccccc
Q 010522          407 PLKMSYMVGYGPRYPQRIHHRGSSLPSVGAHPARIQCSSGFSIMKSQSPNPNVLVGAIVGGPDQHDRFPDERPDYEQSEP  486 (508)
Q Consensus       407 P~~~SyVtG~G~~~p~~pHHR~s~~~~~~~~p~~~~c~~g~~~~~~~~pn~~~l~GaLVGGPn~~d~y~D~~~~y~~nEv  486 (508)
                      |+++|||||||.|+|++||||++|||++..+|..++|++||++++++.||||+|.||||||||.+|.|.|+|.+|++|||
T Consensus       409 P~~~SyvVG~G~~~P~~pHHR~as~p~~~~~~~~~~C~~g~~~~~~~~~n~~vL~GAlVGGPd~~D~y~D~r~~y~~nEv  488 (510)
T PLN02266        409 PLKMSYMVGYGPRYPRRIHHRGSSLPSVAAHPAKIQCSQGFSIMNSQSPNPNVLVGAVVGGPDQHDRFPDERSDYEQSEP  488 (510)
T ss_pred             CCCCceEEecCCCCCccccccCCCCCCcccCccccCCCCCccccCCCCCCcceecceeecCCCCCCCCCccccccccCcc
Confidence            99999999999999999999999999998889999999999999999999999999999999999999999999999999


Q ss_pred             cccCchHHHHHHHHHHhhcCCC
Q 010522          487 STYMNAPLVGALAYLAHSFGQL  508 (508)
Q Consensus       487 aid~NA~lv~~la~l~~~~~~~  508 (508)
                      ||||||+||++||+|.+.+|||
T Consensus       489 a~dyNA~~vgalA~l~~~yg~~  510 (510)
T PLN02266        489 ATYINAPLVGALAYLAHSYGQL  510 (510)
T ss_pred             eeecchHHHHHHHHHHHHhcCC
Confidence            9999999999999999999997

>PLN02308 endoglucanase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02340 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query508
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 5e-90
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 6e-88
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 8e-67
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 2e-64
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 2e-64
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 1e-63
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 2e-55
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 1e-41
3ez8_A537 Crystal Structure Of Endoglucanase Cel9a From The T 9e-10
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  328 bits (841), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 187/461 (40%), Positives = 263/461 (57%), Gaps = 37/461 (8%)
Query: 43  HNYRDALTKSIIFFEGQRSGKLPPNQRMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKFG 102
           ++Y+  L  S++F+E QRSG+LP +Q++TWR+DS L D      DL GGY+DAGD VKFG
Sbjct: 3   YDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFG 62
Query: 103 FPMAFTTTMLSWSVIEF--GGLMKGELRNAREAIRWATDYLLKATVHPDTIYVQVGDANK 160
           FPMA+T T+L+W +I+F  G    G L + R+A++WATDY +KA    +  Y QVG  + 
Sbjct: 63  FPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDA 122
Query: 161 DHACWERPEDMDTPRTVIKIDRNYPGSDVAGETXXXXXXXSLVFRRSDPTYSKLLVRRAI 220
           DHA W RPEDM   R   KID + PGSD+AGET       S+VFR  D TYS  L+  A 
Sbjct: 123 DHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHAR 182
Query: 221 RVFQFADKYRGAYSNGLKKFVCPFYCSYSGYQDELLWGAAWLHKATRNPTYLNYIQVNGQ 280
           ++F FA+ YRG YS+ +      FY S + Y+DEL+W AAWL++AT + TYLN  +    
Sbjct: 183 QLFDFANNYRGKYSDSITD-ARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESLYD 240
Query: 281 ILGAAEYDNTFGWDNKHVGARILLSKAFLVQKLQSLHEYKDHADNFICSLIPGASFSSAQ 340
             G   +     WD+K  G ++LL+      KL +   YKD   +++  LI     ++ Q
Sbjct: 241 EFGLQNWGGGLNWDSKVSGVQVLLA------KLTNKQAYKDTVQSYVNYLI-----NNQQ 289
Query: 341 YTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVD 400
            TP GLL+      +++  + +F++L  A+               ++A   R  A+ Q+D
Sbjct: 290 KTPKGLLYIDMWGTLRHAANAAFIMLEAAE-------------LGLSASSYRQFAQTQID 336
Query: 401 YILGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSVGAHPARIQCSSGFSIMKSQSPNPNVL 460
           Y LGD     S++ G+G   P R HHR SS P     PA   C   ++   S  PN +VL
Sbjct: 337 YALGDG--GRSFVCGFGSNPPTRPHHRSSSCP-----PAPATCD--WNTFNSPDPNYHVL 387
Query: 461 VGAIVGGPDQHDRFPDERPDYEQSEPSTYMNAPLVGALAYL 501
            GA+VGGPDQ+D + D+R DY  +E +T  NA    ALA L
Sbjct: 388 SGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAAL 428
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure
>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The Thermoacidophilic Alicyclobacillus Acidocaldarius Length = 537 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query508
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 0.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 0.0
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 0.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 0.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 1e-178
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-174
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 1e-173
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 1e-158
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 1e-142
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 2e-85
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-04
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
 Score =  539 bits (1389), Expect = 0.0
 Identities = 166/486 (34%), Positives = 237/486 (48%), Gaps = 41/486 (8%)

Query: 32  HPHHHHPHFAKHNYRDALTKSIIFFEGQRSGKLPPNQ-RMTWRRDSGLTDGAAMHVDLVG 90
                 P     NY +AL K+I F+E QRSGKL  +  R+ WR DSGL DG    +DL G
Sbjct: 13  EIPDQPPATGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAGIDLTG 72

Query: 91  GYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMK--GELRNAREAIRWATDYLLKATVHP 148
           G+YDAGD+VKF  PM+++  ML W+V E+    K  G+  +    I+WA DY +K     
Sbjct: 73  GWYDAGDHVKFNLPMSYSAAMLGWAVYEYEDAFKQSGQYNHILNNIKWACDYFIKCHPEK 132

Query: 149 DTIYVQVGDANKDHACWERPEDMDTPRTVIKIDRNYPGSDVAGETAAALAAASLVFRRSD 208
           D  Y QVGD + DHA W   E M   R   K+DR+ PGS V  ET+AALA AS++F++ D
Sbjct: 133 DVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETSAALAIASIIFKKVD 192

Query: 209 PTYSKLLVRRAIRVFQFADKYRGAYSNGLKKFVCPFYCSYSGYQDELLWGAAWLHKATRN 268
             YSK  ++ A  +F+FAD  +             FY S+SG+ DEL W A WL+ AT +
Sbjct: 193 GEYSKECLKHAKELFEFADTTKSDDGYTA---ANGFYNSWSGFYDELSWAAVWLYLATND 249

Query: 269 PTYLNYIQVNGQILGAAEYDN------TFGWDNKHVGARILLSKAFLVQKLQSLHEYKDH 322
            +YL+  +      G     N         WD+   G  +LL++           +YK+ 
Sbjct: 250 SSYLDKAESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARIK-----NDNGKYKEA 304

Query: 323 ADNFICSLIPGASFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHRVVNCG 382
            +  +     G +     YTP GL +     +++Y T+T+FL   Y+ +           
Sbjct: 305 IERHLDWWTTGYNGERITYTPKGLAWLDQWGSLRYATTTAFLACVYSDWE---------N 355

Query: 383 GTTVTAKRLRTIAKRQVDYILGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSVGAHPARIQ 442
           G    AK     A+ Q DY LG      S++VG+G   P+R HHR +             
Sbjct: 356 GDKEKAKTYLEFARSQADYALGSTG--RSFVVGFGENPPKRPHHRTAH------------ 401

Query: 443 CSSGFSIMKSQSPNPNVLVGAIVGGPDQHDRFPDERPDYEQSEPSTYMNAPLVGALAYLA 502
             S          + +VL GA+VGGPD  D + D+  +Y  +E +   NA  VG LA + 
Sbjct: 402 -GSWADSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGFVGLLAKMY 460

Query: 503 HSFGQL 508
             +G+L
Sbjct: 461 KLYGEL 466
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query508
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.81
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.77
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 96.32
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 96.17
3k11_A445 Putative glycosyl hydrolase; structural genomics, 94.85
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 94.68
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 93.53
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 93.05
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 92.75
1nc5_A373 Hypothetical protein YTER; structural genomics, he 92.6
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 91.72
1nc5_A373 Hypothetical protein YTER; structural genomics, he 91.61
3pmm_A382 Putative cytoplasmic protein; structural genomics, 91.32
3pmm_A382 Putative cytoplasmic protein; structural genomics, 89.84
3k11_A445 Putative glycosyl hydrolase; structural genomics, 89.37
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 88.47
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 84.92
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 84.47
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 80.66
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
Probab=100.00  E-value=8.9e-113  Score=909.68  Aligned_cols=437  Identities=37%  Similarity=0.640  Sum_probs=390.9

Q ss_pred             CCCchhHHHHHHHHHHHHHHhhcCCC-CCCCCCCcccCCCCCCCCCcccccccceecCCCCcccccchHHHHHHHHHHHH
Q 010522           39 HFAKHNYRDALTKSIIFFEGQRSGKL-PPNQRMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVI  117 (508)
Q Consensus        39 ~~~~~~Y~~~l~~sl~fy~~QR~G~l-p~~~~~~wr~~s~l~Dg~~~~~dlsGGW~DAGD~~Ky~~~~a~s~~~L~wa~~  117 (508)
                      +.++++|.++|++||+||++||||++ |+.++++||++||++||++.++||+|||||||||+||++|+++++++|+|+++
T Consensus        20 ~~~~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~~~DlsGGwyDAGD~~Ky~~~~a~t~~~L~w~~~   99 (466)
T 2xfg_A           20 ATGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGWAVY   99 (466)
T ss_dssp             -CCSSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccccccccccCCCCceeCCCCCeeccccHHHHHHHHHHHH
Confidence            45678999999999999999999998 99999999999999999999999999999999999999999999999999999


Q ss_pred             Hhcccc--hhhHHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCCCCCCCCCCCCCCCCceEEEcCCCCCchHHHHHHHH
Q 010522          118 EFGGLM--KGELRNAREAIRWATDYLLKATVHPDTIYVQVGDANKDHACWERPEDMDTPRTVIKIDRNYPGSDVAGETAA  195 (508)
Q Consensus       118 ~~~~~~--~~~~~dlLde~kwg~D~llk~~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AA  195 (508)
                      ||++.|  .+++||||||||||+|||||||+++|.||+|||++..||.+|++||+++.+|++|.++.++|||++++++||
T Consensus       100 e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~AA  179 (466)
T 2xfg_A          100 EYEDAFKQSGQYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETSA  179 (466)
T ss_dssp             HCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHHHH
T ss_pred             HhHHHHhcCCCchHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHHHH
Confidence            999999  689999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCcccccCCCCCCchhHHHHHHHHHHHHcCCchHHHHH
Q 010522          196 ALAAASLVFRRSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKKFVCPFYCSYSGYQDELLWGAAWLHKATRNPTYLNYI  275 (508)
Q Consensus       196 alA~as~vf~~~D~~~A~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTg~~~Y~~~~  275 (508)
                      |||+||||||++||+||++||++||++|+||+++|+.|....   .+++|+|++++.||++|||+|||++|||++|++++
T Consensus       180 AlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~~---~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a  256 (466)
T 2xfg_A          180 ALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGYTA---ANGFYNSWSGFYDELSWAAVWLYLATNDSSYLDKA  256 (466)
T ss_dssp             HHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCCT---TTTTSCCSSCSHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred             HHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCCCc---cccccCCCCCCchHHHHHHHHHHHHhCCHHHHHHH
Confidence            999999999999999999999999999999999999985432   57899998999999999999999999999999999


Q ss_pred             HHhhhhhcCC------CCCCccCccchhHHHHHHhhhhhhhhhh-hHHHHHHHHHHHHHhhhcCCCCCCCcccCCCCccc
Q 010522          276 QVNGQILGAA------EYDNTFGWDNKHVGARILLSKAFLVQKL-QSLHEYKDHADNFICSLIPGASFSSAQYTPGGLLF  348 (508)
Q Consensus       276 ~~~~~~~~~~------~~~~~~~Wd~~~~~~~~lla~~~~~~~~-~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w  348 (508)
                      +++...++..      ...+.|+||++..++.++|++.  .++. +.++.++..++.++|    +.+..++++||+|+.|
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~tp~Gl~~  330 (466)
T 2xfg_A          257 ESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARI--KNDNGKYKEAIERHLDWWTT----GYNGERITYTPKGLAW  330 (466)
T ss_dssp             HHTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHH--HCSSCHHHHHHHHHHHHHTT----CBTTBCCCBCTTSCBC
T ss_pred             HHHHHHhccccccccccccCcCCcchhHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHh----ccCCCccccCCccccc
Confidence            9877655421      1246799999999999988862  3322 344556666655543    2222478999999999


Q ss_pred             ccCCChHHHHHHHHHHHHHHHHHHhhcccccccCCcccchHHHHHHHHhcccccccCCCCCCceEeeeCCCCCCCcccCC
Q 010522          349 KMSDSNMQYVTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVDYILGDNPLKMSYMVGYGPRYPQRIHHRG  428 (508)
Q Consensus       349 ~~~w~n~~~a~~~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~NP~~~SyVtG~G~~~p~~pHHR~  428 (508)
                      ...|||++++++.+||+++|++++.       |+  ...+++|+++|++|||||||+|  ++|||||||+|+|++||||+
T Consensus       331 ~~~Wgs~~~~~n~afl~~~y~~~~~-------~~--~~~~~~y~~~A~~qidYiLG~N--~~SyvvG~G~~~p~~pHHR~  399 (466)
T 2xfg_A          331 LDQWGSLRYATTTAFLACVYSDWEN-------GD--KEKAKTYLEFARSQADYALGST--GRSFVVGFGENPPKRPHHRT  399 (466)
T ss_dssp             CCSSSHHHHHHHHHHHHHHHHTCTT-------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCHH
T ss_pred             cCCCCchHHHHHHHHHHHHHHHhcC-------CC--cccHHHHHHHHHHhHHhhcCCC--CcceEeccCCCCCCCCcCch
Confidence            9999999999999999999987542       32  2357899999999999999999  99999999999999999999


Q ss_pred             CCCCCCCCCCCccccCCCcccccCCCCCCCCccceeecCCCCCCCCCCCCCCcccccccccCchHHHHHHHHHHhhcCCC
Q 010522          429 SSLPSVGAHPARIQCSSGFSIMKSQSPNPNVLVGAIVGGPDQHDRFPDERPDYEQSEPSTYMNAPLVGALAYLAHSFGQL  508 (508)
Q Consensus       429 s~~~~~~~~p~~~~c~~g~~~~~~~~pn~~~l~GaLVGGPn~~d~y~D~~~~y~~nEvaid~NA~lv~~la~l~~~~~~~  508 (508)
                      ++|+..             +..++|.|||++|+|+||||||..|+|+|+|++|++|||||||||+||++||+|.+.+|++
T Consensus       400 ss~~~~-------------~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~~g~~  466 (466)
T 2xfg_A          400 AHGSWA-------------DSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGFVGLLAKMYKLYGEL  466 (466)
T ss_dssp             HHTCSS-------------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred             hccCcc-------------ccccCCCCCCCCCccceeeCCCCccCcCcccccccccccchhhhHHHHHHHHHHHHHcCCC
Confidence            998642             1235788999999999999999999999999999999999999999999999999988764
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 508
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 0.0
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 1e-174
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-172
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 1e-164
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 1e-125
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 1e-125
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  519 bits (1339), Expect = 0.0
 Identities = 195/475 (41%), Positives = 266/475 (56%), Gaps = 40/475 (8%)

Query: 42  KHNYRDALTKSIIFFEGQRSGKLPPNQRMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKF 101
             NY +AL KS+ F+E QRSGKLP N R++WR DSGL DGA + +DL GG+YDAGD+VKF
Sbjct: 3   AFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKF 62

Query: 102 GFPMAFTTTMLSWSVIEFGGLMK--GELRNAREAIRWATDYLLKATVHPDTIYVQVGDAN 159
           GFPMAFT TML+W  IE        G++   ++ +RW  DY +KA   P+ +YVQVGD +
Sbjct: 63  GFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGD 122

Query: 160 KDHACWERPEDMDTPRTVIKIDRNYPGSDVAGETAAALAAASLVFRRSDPTYSKLLVRRA 219
            DH  W   E M   R   K+D + PGSDVA ETAAA+AA+S+VF   DP Y+  LV+ A
Sbjct: 123 ADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHA 182

Query: 220 IRVFQFADKYRGAYSNGLKKFVCPFYCSYSGYQDELLWGAAWLHKATRNPTYLNYIQVNG 279
            +++ FAD YRG YS+ +      FY S+SGYQDEL+WGA WL+KAT + +YL   +   
Sbjct: 183 KQLYTFADTYRGVYSDCV--PAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEY 240

Query: 280 QILGAAE------YDNTFGWDNKHVGARILLSKAFLVQKLQSLHEYKDHADNFICSLIPG 333
             L   +      Y  T  WD+K  G  +LL+K    QK      Y D A+ ++     G
Sbjct: 241 DFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKETGKQK------YIDDANRWLDYWTVG 294

Query: 334 ASFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRT 393
            +     Y+PGG+    +   ++Y  +T+F+ L YAK +             V  +R   
Sbjct: 295 VNGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDP----------VRKQRYHD 344

Query: 394 IAKRQVDYILGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSVGAHPARIQCSSGFSIMKSQ 453
            A RQ++Y LGDNP   SY+VG+G   P+  HHR +               S    + S 
Sbjct: 345 FAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAH-------------GSWTDSIASP 391

Query: 454 SPNPNVLVGAIVGGPDQ-HDRFPDERPDYEQSEPSTYMNAPLVGALAYLAHSFGQ 507
           + N +VL GA+VGGP   +D + D+R DY  +E +T  NA    ALA L   +G 
Sbjct: 392 AENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGG 446
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query508
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 91.48
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 90.47
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 88.53
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 86.43
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 85.29
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 85.09
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=6.4e-106  Score=858.29  Aligned_cols=436  Identities=43%  Similarity=0.760  Sum_probs=382.6

Q ss_pred             CchhHHHHHHHHHHHHHHhhcCCCCCCCCCCcccCCCCCCCCCcccccccceecCCCCcccccchHHHHHHHHHHHHHhc
Q 010522           41 AKHNYRDALTKSIIFFEGQRSGKLPPNQRMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFG  120 (508)
Q Consensus        41 ~~~~Y~~~l~~sl~fy~~QR~G~lp~~~~~~wr~~s~l~Dg~~~~~dlsGGW~DAGD~~Ky~~~~a~s~~~L~wa~~~~~  120 (508)
                      ++++|.++|++||+||++||||.+|+.++++||++||+.||++.++||+|||||||||+||++|+++++++|+|++++||
T Consensus         2 ~~~~Y~~al~~sl~ff~~QRsG~~p~~~~~~wr~~s~~~Dg~~~~~DvsGGWyDAGD~~KY~~~~a~~~~~L~~a~~~~~   81 (460)
T d1tf4a1           2 PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESP   81 (460)
T ss_dssp             CSSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCH
T ss_pred             CCCCHHHHHHHHHHHHHHccCcCCCcccCCCCCccccCCCcccCcCCCCCCceeCCCcceecccHHHHHHHHHHHHHHCh
Confidence            56899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccc--hhhHHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCCCCCCCCCCCCCCCCceEEEcCCCCCchHHHHHHHHHHH
Q 010522          121 GLM--KGELRNAREAIRWATDYLLKATVHPDTIYVQVGDANKDHACWERPEDMDTPRTVIKIDRNYPGSDVAGETAAALA  198 (508)
Q Consensus       121 ~~~--~~~~~dlLde~kwg~D~llk~~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA  198 (508)
                      +.|  +|++||||||+|||+|||+|||+++|.||+|||++..||..|++|+.++.+|+.+.+..++|+|++++++|||||
T Consensus        82 ~~~~~~~~~pdlLdE~~wglD~llkmq~~~g~~y~qvgdg~~dh~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~aAalA  161 (460)
T d1tf4a1          82 EGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMA  161 (460)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHH
T ss_pred             HhhhcCCCcHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCccccccCCCcCCCCCCCcceecCCCccHHHHHHHHHHHH
Confidence            998  789999999999999999999999999999999998999999999999999999988888899999999999999


Q ss_pred             HHhhhcccCCHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCcccccCCCCCCchhHHHHHHHHHHHHcCCchHHHHHHHh
Q 010522          199 AASLVFRRSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKKFVCPFYCSYSGYQDELLWGAAWLHKATRNPTYLNYIQVN  278 (508)
Q Consensus       199 ~as~vf~~~D~~~A~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTg~~~Y~~~~~~~  278 (508)
                      +|||||+++||+||++||++||++|+||+++|+.|.+..+. ...+|.+ +++.||++|||+|||++|||++|+++++..
T Consensus       162 ~as~v~~~~d~~~A~~~l~aA~~a~~~a~~~~~~~~~~~~~-~~~~~~~-~~~~De~~wAAaeLy~aTG~~~Y~~~a~~~  239 (460)
T d1tf4a1         162 ASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPA-GAFYNSW-SGYQDELVWGAYWLYKATGDDSYLAKAEYE  239 (460)
T ss_dssp             HHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTT-HHHHCCS-SCSHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred             HHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CCcCCCc-cccchHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999876553 2334555 889999999999999999999999999987


Q ss_pred             hhhhcCC------CCCCccCccchhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHhhhcCCCCCCCcccCCCCcccccCC
Q 010522          279 GQILGAA------EYDNTFGWDNKHVGARILLSKAFLVQKLQSLHEYKDHADNFICSLIPGASFSSAQYTPGGLLFKMSD  352 (508)
Q Consensus       279 ~~~~~~~------~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~w  352 (508)
                      ...+...      .....++|+++..+..+++++.  ..    ...+++.++.+++.+..+.....++++++++.|...|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~la~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W  313 (460)
T d1tf4a1         240 YDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKE--TG----KQKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLDTW  313 (460)
T ss_dssp             GGGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHH--HC----CHHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCCSS
T ss_pred             hhhcccccccccccccccccccchhHHHHHHHHHH--hh----hhHHHHHHHHHHHHHhhhcccccCCcCCCcceecCCC
Confidence            6544321      2235689999998888777652  11    2334555666665544443333677889999888899


Q ss_pred             ChHHHHHHHHHHHHHHHHHHhhcccccccCCcccchHHHHHHHHhcccccccCCCCCCceEeeeCCCCCCCcccCCCCCC
Q 010522          353 SNMQYVTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVDYILGDNPLKMSYMVGYGPRYPQRIHHRGSSLP  432 (508)
Q Consensus       353 ~n~~~a~~~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~NP~~~SyVtG~G~~~p~~pHHR~s~~~  432 (508)
                      |+.++++|.+++++++.+++..          ..++++|+++|++|||||||+||+++|||||+|.|+|++||||.++|+
T Consensus       314 Gsn~~~~n~a~~~~~a~~~~~~----------~~~~~~y~~~A~~qldylLG~Np~~~SyVtG~G~~~p~~pHHR~s~~~  383 (460)
T d1tf4a1         314 GALRYAANTAFVALVYAKVIDD----------PVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGS  383 (460)
T ss_dssp             SHHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHHTC
T ss_pred             chHHHHHHHHHHHHHHHHHhcc----------cCCHHHHHHHHHHhhheecccCCCCcCCCccCCCCCCCCCcCccccCC
Confidence            9999999999999998875432          235679999999999999999999999999999999999999998864


Q ss_pred             CCCCCCCccccCCCcccccCCCCCCCCccceeecCCC-CCCCCCCCCCCcccccccccCchHHHHHHHHHHhhcCC
Q 010522          433 SVGAHPARIQCSSGFSIMKSQSPNPNVLVGAIVGGPD-QHDRFPDERPDYEQSEPSTYMNAPLVGALAYLAHSFGQ  507 (508)
Q Consensus       433 ~~~~~p~~~~c~~g~~~~~~~~pn~~~l~GaLVGGPn-~~d~y~D~~~~y~~nEvaid~NA~lv~~la~l~~~~~~  507 (508)
                      ..             +....+.|||++|+|+|||||| +.+||+|++++|++|||||||||+||++||+|++..+.
T Consensus       384 ~~-------------~~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~~  446 (460)
T d1tf4a1         384 WT-------------DSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGG  446 (460)
T ss_dssp             SS-------------SCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHCC
T ss_pred             Cc-------------cccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHHHHHHHHHhcCC
Confidence            42             1235678999999999999998 58999999999999999999999999999999988553
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure