Query 010523
Match_columns 508
No_of_seqs 369 out of 2499
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 01:31:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010523.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010523hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0205 Plasma membrane H+-tra 100.0 2E-107 4E-112 828.0 26.5 498 1-508 266-942 (942)
2 COG0474 MgtA Cation transport 100.0 4.4E-82 9.4E-87 712.1 36.1 445 8-456 294-777 (917)
3 KOG0202 Ca2+ transporting ATPa 100.0 2.7E-80 6E-85 648.1 35.2 441 7-448 277-810 (972)
4 KOG0204 Calcium transporting A 100.0 2E-81 4.4E-86 655.8 25.8 485 11-508 384-919 (1034)
5 PRK15122 magnesium-transportin 100.0 5.4E-77 1.2E-81 669.9 43.6 435 5-448 312-767 (903)
6 PRK10517 magnesium-transportin 100.0 3.6E-77 7.8E-82 670.4 41.9 432 4-443 313-763 (902)
7 TIGR01647 ATPase-IIIA_H plasma 100.0 1.4E-76 3E-81 657.9 42.0 419 5-433 229-649 (755)
8 TIGR01524 ATPase-IIIB_Mg magne 100.0 5.6E-76 1.2E-80 660.8 43.7 432 4-443 278-728 (867)
9 TIGR01523 ATPase-IID_K-Na pota 100.0 2E-75 4.3E-80 664.2 42.0 438 10-448 307-883 (1053)
10 TIGR01517 ATPase-IIB_Ca plasma 100.0 1.2E-74 2.6E-79 657.2 42.2 435 8-445 322-798 (941)
11 TIGR01106 ATPase-IIC_X-K sodiu 100.0 7.4E-74 1.6E-78 652.6 41.6 440 4-444 286-812 (997)
12 TIGR01522 ATPase-IIA2_Ca golgi 100.0 7.5E-72 1.6E-76 630.7 41.7 433 4-447 266-749 (884)
13 TIGR01116 ATPase-IIA1_Ca sarco 100.0 1.7E-71 3.7E-76 629.2 41.3 435 11-447 238-761 (917)
14 TIGR01657 P-ATPase-V P-type AT 100.0 4E-71 8.8E-76 633.9 35.8 435 6-443 392-924 (1054)
15 TIGR01652 ATPase-Plipid phosph 100.0 1.2E-65 2.7E-70 590.1 34.0 437 9-447 296-904 (1057)
16 PRK14010 potassium-transportin 100.0 4.6E-64 1E-68 542.0 34.8 334 8-394 244-578 (673)
17 PRK01122 potassium-transportin 100.0 2.3E-63 4.9E-68 537.1 37.0 328 11-390 247-578 (679)
18 KOG0203 Na+/K+ ATPase, alpha s 100.0 2.7E-65 5.8E-70 534.3 14.7 439 6-445 310-835 (1019)
19 COG2217 ZntA Cation transport 100.0 5.1E-62 1.1E-66 526.5 34.8 366 2-435 344-710 (713)
20 PLN03190 aminophospholipid tra 100.0 7E-62 1.5E-66 555.1 36.1 440 13-454 394-1015(1178)
21 TIGR01497 kdpB K+-transporting 100.0 1.7E-59 3.7E-64 505.8 36.5 330 10-390 247-579 (675)
22 KOG0207 Cation transport ATPas 100.0 3.5E-58 7.6E-63 487.7 24.5 372 7-434 527-901 (951)
23 PRK11033 zntA zinc/cadmium/mer 100.0 6.3E-55 1.4E-59 483.3 35.3 358 4-433 378-737 (741)
24 KOG0208 Cation transport ATPas 100.0 3.4E-56 7.4E-61 472.4 22.1 390 5-398 411-933 (1140)
25 TIGR01494 ATPase_P-type ATPase 100.0 5.7E-54 1.2E-58 459.7 35.1 308 8-401 176-483 (499)
26 KOG0206 P-type ATPase [General 100.0 1.5E-56 3.2E-61 496.3 12.8 443 10-454 325-938 (1151)
27 PRK10671 copA copper exporting 100.0 2.2E-51 4.9E-56 462.9 37.6 363 9-433 464-828 (834)
28 KOG0210 P-type ATPase [Inorgan 100.0 2.8E-53 6E-58 434.4 18.2 430 5-443 346-912 (1051)
29 TIGR01511 ATPase-IB1_Cu copper 100.0 4.1E-50 8.9E-55 433.4 36.9 328 9-404 224-551 (562)
30 TIGR01525 ATPase-IB_hvy heavy 100.0 1E-49 2.2E-54 431.2 36.4 333 11-403 195-531 (556)
31 TIGR01512 ATPase-IB2_Cd heavy 100.0 5.5E-49 1.2E-53 423.1 30.7 339 9-431 193-533 (536)
32 KOG0209 P-type ATPase [Inorgan 100.0 6.6E-45 1.4E-49 379.1 16.5 324 20-349 437-836 (1160)
33 COG2216 KdpB High-affinity K+ 100.0 7.6E-43 1.7E-47 349.1 24.9 315 11-376 248-566 (681)
34 PF00702 Hydrolase: haloacid d 99.9 6.7E-28 1.4E-32 229.4 11.8 211 62-339 1-215 (215)
35 COG4087 Soluble P-type ATPase 99.7 5.9E-16 1.3E-20 129.6 11.1 123 217-370 20-145 (152)
36 PRK11133 serB phosphoserine ph 99.1 1.5E-10 3.3E-15 116.6 9.9 131 227-372 181-316 (322)
37 TIGR02137 HSK-PSP phosphoserin 99.1 5.7E-10 1.2E-14 105.4 11.4 131 227-374 68-198 (203)
38 PRK01158 phosphoglycolate phos 99.1 5.5E-10 1.2E-14 107.6 10.4 145 228-372 21-226 (230)
39 PRK10513 sugar phosphate phosp 99.1 4.6E-10 1E-14 110.9 8.7 66 307-372 196-265 (270)
40 COG0561 Cof Predicted hydrolas 99.0 1.9E-09 4.1E-14 106.2 12.6 153 221-373 13-259 (264)
41 TIGR01487 SPP-like sucrose-pho 99.0 1E-09 2.2E-14 104.8 9.8 144 227-370 18-214 (215)
42 TIGR02726 phenyl_P_delta pheny 99.0 1.8E-09 3.8E-14 98.7 8.6 104 234-367 41-146 (169)
43 TIGR00338 serB phosphoserine p 99.0 2.8E-09 6E-14 101.9 10.3 129 227-370 85-218 (219)
44 PRK15126 thiamin pyrimidine py 99.0 2.6E-09 5.6E-14 105.8 10.0 66 307-372 188-259 (272)
45 PRK10976 putative hydrolase; P 98.9 4.5E-09 9.9E-14 103.6 10.4 66 307-372 190-261 (266)
46 TIGR01670 YrbI-phosphatas 3-de 98.9 2.3E-09 5E-14 96.8 7.6 117 217-371 24-145 (154)
47 TIGR01482 SPP-subfamily Sucros 98.9 4.3E-09 9.4E-14 100.9 9.4 146 227-372 15-222 (225)
48 COG0560 SerB Phosphoserine pho 98.9 7.3E-09 1.6E-13 98.4 9.8 122 226-362 76-202 (212)
49 PF08282 Hydrolase_3: haloacid 98.8 1.3E-08 2.9E-13 98.5 9.5 66 306-371 185-254 (254)
50 PRK10530 pyridoxal phosphate ( 98.8 1.9E-08 4.1E-13 99.4 10.4 66 307-372 199-268 (272)
51 PLN02887 hydrolase family prot 98.8 1.7E-08 3.6E-13 109.0 10.6 52 321-372 525-576 (580)
52 PF13246 Hydrolase_like2: Puta 98.8 1.7E-08 3.7E-13 82.5 6.5 64 109-173 20-89 (91)
53 PRK09484 3-deoxy-D-manno-octul 98.7 4.7E-08 1E-12 90.9 8.1 102 234-367 55-160 (183)
54 TIGR00099 Cof-subfamily Cof su 98.7 3.8E-08 8.2E-13 96.5 7.6 65 307-371 188-256 (256)
55 PRK13582 thrH phosphoserine ph 98.7 1.7E-07 3.6E-12 88.6 11.5 128 227-372 68-196 (205)
56 TIGR01486 HAD-SF-IIB-MPGP mann 98.7 1.7E-07 3.7E-12 92.0 11.2 66 307-372 176-253 (256)
57 COG1778 Low specificity phosph 98.6 8.5E-08 1.8E-12 83.8 7.6 113 235-379 43-163 (170)
58 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.6 1.9E-07 4.1E-12 87.7 9.2 117 227-356 80-200 (201)
59 PRK03669 mannosyl-3-phosphogly 98.6 2.8E-07 6E-12 91.3 10.8 66 307-372 187-265 (271)
60 TIGR03333 salvage_mtnX 2-hydro 98.6 4.9E-07 1.1E-11 86.2 11.4 139 226-372 69-209 (214)
61 PRK00192 mannosyl-3-phosphogly 98.5 5.6E-07 1.2E-11 89.2 10.3 66 307-372 190-267 (273)
62 KOG1615 Phosphoserine phosphat 98.5 3.4E-07 7.3E-12 82.8 6.7 122 228-359 89-215 (227)
63 PF12710 HAD: haloacid dehalog 98.4 3.8E-07 8.3E-12 84.9 6.1 92 230-336 92-192 (192)
64 PLN02954 phosphoserine phospha 98.4 2.5E-06 5.5E-11 81.7 11.2 130 228-369 85-221 (224)
65 PRK09552 mtnX 2-hydroxy-3-keto 98.4 2E-06 4.3E-11 82.3 9.8 135 227-371 74-212 (219)
66 TIGR01489 DKMTPPase-SF 2,3-dik 98.3 3.2E-06 6.8E-11 78.4 8.6 110 227-343 72-186 (188)
67 TIGR01488 HAD-SF-IB Haloacid D 98.2 2.9E-06 6.3E-11 77.9 6.5 100 228-338 74-177 (177)
68 PRK13222 phosphoglycolate phos 98.2 8.6E-06 1.9E-10 77.9 9.7 128 226-374 92-224 (226)
69 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.1 6.6E-06 1.4E-10 77.4 8.2 108 226-346 86-198 (202)
70 TIGR01485 SPP_plant-cyano sucr 98.1 1E-05 2.3E-10 79.0 9.1 147 226-372 20-244 (249)
71 COG0546 Gph Predicted phosphat 98.1 1.4E-05 3E-10 76.6 9.3 127 225-372 87-218 (220)
72 TIGR01454 AHBA_synth_RP 3-amin 98.1 1.7E-05 3.7E-10 74.9 8.9 124 227-371 75-203 (205)
73 cd01427 HAD_like Haloacid deha 98.0 2.2E-05 4.7E-10 67.9 7.2 118 223-343 20-138 (139)
74 TIGR02471 sucr_syn_bact_C sucr 98.0 1E-05 2.2E-10 78.3 5.4 66 307-372 159-232 (236)
75 PRK13288 pyrophosphatase PpaX; 97.9 5.4E-05 1.2E-09 72.0 8.5 123 228-371 83-210 (214)
76 PRK13223 phosphoglycolate phos 97.8 7.6E-05 1.7E-09 73.9 9.1 126 226-372 100-230 (272)
77 TIGR02461 osmo_MPG_phos mannos 97.8 7.1E-05 1.5E-09 71.9 8.3 43 225-267 13-55 (225)
78 TIGR01449 PGP_bact 2-phosphogl 97.8 7E-05 1.5E-09 71.0 8.0 122 227-369 85-211 (213)
79 PRK08238 hypothetical protein; 97.8 0.0001 2.3E-09 78.4 9.4 99 227-350 72-170 (479)
80 TIGR02463 MPGP_rel mannosyl-3- 97.7 0.00023 5.1E-09 67.9 10.2 38 230-267 19-56 (221)
81 TIGR01422 phosphonatase phosph 97.7 0.00019 4.1E-09 70.2 9.7 100 227-344 99-200 (253)
82 PRK13226 phosphoglycolate phos 97.7 0.00016 3.5E-09 69.7 8.8 124 227-371 95-224 (229)
83 PRK10826 2-deoxyglucose-6-phos 97.7 9.6E-05 2.1E-09 70.7 7.1 121 227-368 92-216 (222)
84 PRK10187 trehalose-6-phosphate 97.6 0.00032 6.8E-09 69.3 10.0 140 227-372 36-241 (266)
85 PRK13478 phosphonoacetaldehyde 97.6 0.00052 1.1E-08 67.7 11.1 96 227-340 101-197 (267)
86 TIGR03351 PhnX-like phosphonat 97.6 0.00032 6.9E-09 66.9 8.9 125 226-370 86-218 (220)
87 TIGR01544 HAD-SF-IE haloacid d 97.5 0.0011 2.4E-08 65.2 11.5 134 226-372 120-274 (277)
88 PRK11590 hypothetical protein; 97.5 0.00049 1.1E-08 65.4 8.9 105 227-346 95-203 (211)
89 PLN02382 probable sucrose-phos 97.5 0.00014 3E-09 76.3 5.6 72 301-372 167-257 (413)
90 PLN02770 haloacid dehalogenase 97.5 0.00054 1.2E-08 66.9 9.4 116 227-361 108-227 (248)
91 PRK12702 mannosyl-3-phosphogly 97.4 0.0006 1.3E-08 67.1 9.1 42 227-268 18-59 (302)
92 PRK13225 phosphoglycolate phos 97.4 0.001 2.2E-08 65.9 10.8 121 227-371 142-267 (273)
93 KOG4383 Uncharacterized conser 97.3 0.0026 5.6E-08 67.8 12.6 174 216-389 815-1094(1354)
94 PLN03243 haloacid dehalogenase 97.3 0.00092 2E-08 65.7 8.6 121 227-368 109-231 (260)
95 PRK06769 hypothetical protein; 97.3 0.00082 1.8E-08 61.8 7.7 100 228-345 29-137 (173)
96 TIGR01545 YfhB_g-proteo haloac 97.3 0.001 2.2E-08 63.2 8.1 107 227-346 94-202 (210)
97 PRK06698 bifunctional 5'-methy 97.2 0.0013 2.7E-08 70.3 9.2 124 227-374 330-456 (459)
98 TIGR01548 HAD-SF-IA-hyp1 haloa 97.2 0.00065 1.4E-08 63.7 5.8 94 225-338 104-197 (197)
99 PRK11587 putative phosphatase; 97.2 0.0014 3.1E-08 62.5 8.1 115 227-361 83-199 (218)
100 PRK14502 bifunctional mannosyl 97.1 0.0023 4.9E-08 69.9 9.8 40 228-267 434-473 (694)
101 PRK11009 aphA acid phosphatase 97.0 0.0018 3.9E-08 62.5 7.6 93 227-345 114-211 (237)
102 TIGR02253 CTE7 HAD superfamily 97.0 0.0013 2.9E-08 62.6 6.7 100 227-345 94-195 (221)
103 PRK14501 putative bifunctional 97.0 0.0046 9.9E-08 69.9 11.2 61 306-372 656-721 (726)
104 TIGR01484 HAD-SF-IIB HAD-super 97.0 0.0018 3.8E-08 61.0 6.8 39 227-265 17-55 (204)
105 PLN02575 haloacid dehalogenase 97.0 0.0024 5.3E-08 65.7 8.1 120 227-367 216-337 (381)
106 PHA02530 pseT polynucleotide k 97.0 0.0023 5E-08 64.2 7.8 108 223-341 183-291 (300)
107 TIGR01428 HAD_type_II 2-haloal 96.9 0.0021 4.6E-08 60.1 7.1 96 227-341 92-187 (198)
108 COG4030 Uncharacterized protei 96.9 0.0043 9.2E-08 58.0 8.5 144 228-372 84-262 (315)
109 TIGR01672 AphA HAD superfamily 96.9 0.0017 3.8E-08 62.6 6.0 91 228-344 115-210 (237)
110 PLN02779 haloacid dehalogenase 96.9 0.0024 5.3E-08 63.6 7.1 117 227-361 144-264 (286)
111 PRK08942 D,D-heptose 1,7-bisph 96.8 0.0052 1.1E-07 56.8 8.7 127 228-372 30-177 (181)
112 TIGR01990 bPGM beta-phosphoglu 96.8 0.0019 4E-08 59.6 5.5 94 227-341 87-180 (185)
113 PRK14988 GMP/IMP nucleotidase; 96.8 0.0026 5.6E-08 61.1 6.6 101 227-346 93-195 (224)
114 PF13419 HAD_2: Haloacid dehal 96.7 0.0011 2.4E-08 59.9 3.2 96 227-341 77-172 (176)
115 TIGR02254 YjjG/YfnB HAD superf 96.7 0.0037 8.1E-08 59.5 6.6 121 227-369 97-222 (224)
116 PTZ00174 phosphomannomutase; P 96.7 0.0024 5.1E-08 62.3 5.0 60 300-359 179-245 (247)
117 TIGR01662 HAD-SF-IIIA HAD-supe 96.6 0.0059 1.3E-07 53.1 6.8 92 227-341 25-126 (132)
118 COG4359 Uncharacterized conser 96.6 0.0046 1E-07 55.9 6.1 108 228-343 74-183 (220)
119 TIGR01509 HAD-SF-IA-v3 haloaci 96.6 0.0064 1.4E-07 55.7 7.1 94 227-340 85-178 (183)
120 TIGR02009 PGMB-YQAB-SF beta-ph 96.5 0.0034 7.5E-08 57.8 5.0 92 227-341 88-181 (185)
121 PLN02940 riboflavin kinase 96.5 0.0051 1.1E-07 64.0 6.5 116 227-361 93-212 (382)
122 PRK09449 dUMP phosphatase; Pro 96.3 0.01 2.3E-07 56.6 7.0 123 227-371 95-222 (224)
123 PLN02811 hydrolase 96.3 0.015 3.1E-07 55.6 7.8 118 227-361 78-202 (220)
124 TIGR01668 YqeG_hyp_ppase HAD s 96.2 0.019 4.1E-07 52.6 8.1 114 189-345 20-136 (170)
125 smart00775 LNS2 LNS2 domain. T 96.2 0.031 6.8E-07 50.5 9.2 103 225-341 25-141 (157)
126 TIGR01656 Histidinol-ppas hist 96.1 0.0084 1.8E-07 53.5 5.0 99 227-341 27-140 (147)
127 TIGR01685 MDP-1 magnesium-depe 96.1 0.024 5.3E-07 52.0 8.0 112 217-344 35-155 (174)
128 TIGR01261 hisB_Nterm histidino 96.1 0.0082 1.8E-07 54.5 4.8 99 227-345 29-147 (161)
129 PF05116 S6PP: Sucrose-6F-phos 96.0 0.0076 1.6E-07 58.8 4.5 68 306-373 164-244 (247)
130 TIGR01549 HAD-SF-IA-v1 haloaci 96.0 0.01 2.2E-07 53.0 4.9 90 228-339 65-154 (154)
131 TIGR00213 GmhB_yaeD D,D-heptos 95.9 0.021 4.5E-07 52.5 6.9 128 228-367 27-174 (176)
132 PLN02580 trehalose-phosphatase 95.9 0.067 1.5E-06 55.2 10.9 68 301-372 292-374 (384)
133 TIGR02252 DREG-2 REG-2-like, H 95.9 0.018 3.8E-07 54.1 6.2 95 227-341 105-200 (203)
134 COG2179 Predicted hydrolase of 95.8 0.074 1.6E-06 47.7 9.5 109 185-340 19-132 (175)
135 smart00577 CPDc catalytic doma 95.8 0.013 2.8E-07 52.4 4.6 95 227-343 45-139 (148)
136 PF06888 Put_Phosphatase: Puta 95.6 0.042 9E-07 52.9 7.6 112 227-342 71-195 (234)
137 PRK10563 6-phosphogluconate ph 95.2 0.037 8E-07 52.7 5.9 96 227-343 88-183 (221)
138 TIGR01533 lipo_e_P4 5'-nucleot 95.2 0.12 2.6E-06 50.9 9.3 87 225-336 116-205 (266)
139 TIGR02247 HAD-1A3-hyp Epoxide 95.0 0.035 7.6E-07 52.4 5.0 102 227-347 94-198 (211)
140 TIGR01681 HAD-SF-IIIC HAD-supe 94.9 0.08 1.7E-06 46.0 6.6 39 227-265 29-68 (128)
141 PLN02919 haloacid dehalogenase 94.9 0.079 1.7E-06 62.2 8.5 116 228-361 162-281 (1057)
142 PRK05446 imidazole glycerol-ph 94.8 0.052 1.1E-06 55.5 6.0 100 227-344 30-147 (354)
143 TIGR01664 DNA-3'-Pase DNA 3'-p 94.6 0.091 2E-06 47.9 6.6 94 228-342 43-158 (166)
144 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.6 0.17 3.7E-06 49.0 8.8 94 220-339 17-115 (242)
145 TIGR01691 enolase-ppase 2,3-di 94.4 0.095 2.1E-06 50.1 6.4 98 224-342 92-192 (220)
146 TIGR00685 T6PP trehalose-phosp 94.3 0.055 1.2E-06 52.6 4.6 66 303-372 163-240 (244)
147 TIGR01675 plant-AP plant acid 94.2 0.24 5.2E-06 47.5 8.6 88 225-333 118-210 (229)
148 PLN02205 alpha,alpha-trehalose 94.1 0.19 4.2E-06 57.5 9.2 37 227-263 616-653 (854)
149 COG3769 Predicted hydrolase (H 93.7 0.28 6.1E-06 46.0 7.7 37 231-267 27-63 (274)
150 PLN03017 trehalose-phosphatase 93.7 1.1 2.3E-05 46.1 12.6 62 307-372 283-356 (366)
151 PRK09456 ?-D-glucose-1-phospha 93.6 0.15 3.2E-06 47.8 5.9 101 227-346 84-186 (199)
152 PRK10725 fructose-1-P/6-phosph 93.3 0.18 3.9E-06 46.5 6.0 90 232-341 92-181 (188)
153 TIGR01686 FkbH FkbH-like domai 93.2 0.17 3.6E-06 51.4 6.0 91 227-345 31-129 (320)
154 PF09419 PGP_phosphatase: Mito 93.1 0.44 9.5E-06 43.4 7.8 112 189-344 36-163 (168)
155 TIGR01993 Pyr-5-nucltdase pyri 92.2 0.22 4.8E-06 45.8 4.9 97 227-341 84-180 (184)
156 KOG3120 Predicted haloacid deh 91.6 0.29 6.3E-06 45.9 4.9 145 178-345 55-209 (256)
157 PLN02645 phosphoglycolate phos 90.0 0.44 9.6E-06 48.1 5.0 47 220-266 37-86 (311)
158 COG0637 Predicted phosphatase/ 88.3 1.2 2.5E-05 42.6 6.3 101 226-345 85-186 (221)
159 PHA02597 30.2 hypothetical pro 88.0 0.99 2.2E-05 41.9 5.5 97 228-347 75-176 (197)
160 PLN02423 phosphomannomutase 87.5 0.92 2E-05 44.1 5.1 43 307-350 189-236 (245)
161 PF13344 Hydrolase_6: Haloacid 87.3 0.39 8.6E-06 39.8 2.1 48 220-267 7-57 (101)
162 PF03767 Acid_phosphat_B: HAD 86.6 1 2.3E-05 43.3 4.8 89 227-334 115-207 (229)
163 TIGR01680 Veg_Stor_Prot vegeta 85.7 4.4 9.6E-05 39.8 8.6 90 225-333 143-236 (275)
164 PRK10748 flavin mononucleotide 85.6 1.2 2.7E-05 42.9 4.9 92 227-343 113-205 (238)
165 COG1011 Predicted hydrolase (H 84.9 3 6.5E-05 39.4 7.2 97 227-345 99-199 (229)
166 TIGR01458 HAD-SF-IIA-hyp3 HAD- 84.9 0.46 9.9E-06 46.5 1.5 118 230-370 123-253 (257)
167 PF08235 LNS2: LNS2 (Lipin/Ned 83.4 5.3 0.00011 35.9 7.5 102 226-341 26-141 (157)
168 PLN02177 glycerol-3-phosphate 82.7 5.2 0.00011 43.1 8.5 98 228-346 111-215 (497)
169 TIGR01493 HAD-SF-IA-v2 Haloaci 80.4 2.2 4.7E-05 38.7 4.1 85 227-337 90-174 (175)
170 TIGR01684 viral_ppase viral ph 80.2 2.9 6.4E-05 41.5 5.1 41 228-268 146-187 (301)
171 TIGR02251 HIF-SF_euk Dullard-l 80.1 1.8 3.8E-05 39.2 3.3 92 226-342 41-135 (162)
172 PRK10444 UMP phosphatase; Prov 80.0 1.9 4E-05 42.1 3.7 45 220-264 10-54 (248)
173 PF00689 Cation_ATPase_C: Cati 78.9 0.5 1.1E-05 43.4 -0.7 42 407-448 2-44 (182)
174 TIGR01458 HAD-SF-IIA-hyp3 HAD- 78.5 2.6 5.7E-05 41.2 4.2 48 220-267 10-64 (257)
175 TIGR01457 HAD-SF-IIA-hyp2 HAD- 78.2 3.9 8.5E-05 39.7 5.4 48 220-267 10-60 (249)
176 TIGR02244 HAD-IG-Ncltidse HAD 77.6 9.7 0.00021 38.9 8.1 112 229-345 186-323 (343)
177 PHA03398 viral phosphatase sup 77.4 4 8.7E-05 40.6 5.1 40 228-267 148-188 (303)
178 TIGR01452 PGP_euk phosphoglyco 77.1 7.8 0.00017 38.3 7.2 48 220-267 11-61 (279)
179 TIGR01663 PNK-3'Pase polynucle 75.3 6.4 0.00014 42.7 6.4 40 228-267 198-249 (526)
180 COG3700 AphA Acid phosphatase 75.0 5.3 0.00011 36.4 4.7 91 228-345 115-211 (237)
181 PF05822 UMPH-1: Pyrimidine 5' 72.8 11 0.00024 36.4 6.7 129 227-371 90-241 (246)
182 TIGR01689 EcbF-BcbF capsule bi 69.4 5.4 0.00012 34.5 3.4 31 226-256 23-53 (126)
183 PTZ00174 phosphomannomutase; P 69.2 7.5 0.00016 37.7 4.8 35 227-261 22-56 (247)
184 KOG3040 Predicted sugar phosph 68.8 11 0.00023 35.5 5.3 50 217-266 13-65 (262)
185 PTZ00445 p36-lilke protein; Pr 65.4 18 0.0004 34.2 6.2 64 178-254 27-102 (219)
186 COG0241 HisB Histidinol phosph 63.0 23 0.0005 32.7 6.4 24 228-251 32-55 (181)
187 TIGR01512 ATPase-IB2_Cd heavy 61.3 1.1E+02 0.0024 33.3 12.5 165 176-417 361-530 (536)
188 COG0647 NagD Predicted sugar p 59.5 11 0.00024 37.1 3.9 47 218-264 15-61 (269)
189 PF13242 Hydrolase_like: HAD-h 59.0 7.7 0.00017 29.8 2.2 53 309-361 11-71 (75)
190 TIGR02250 FCP1_euk FCP1-like p 58.7 18 0.00039 32.4 4.9 42 226-268 57-98 (156)
191 KOG3085 Predicted hydrolase (H 58.2 22 0.00048 34.3 5.6 104 230-356 116-224 (237)
192 TIGR01456 CECR5 HAD-superfamil 57.7 44 0.00096 33.7 8.1 49 219-267 8-64 (321)
193 TIGR01459 HAD-SF-IIA-hyp4 HAD- 55.9 8 0.00017 37.3 2.3 91 229-341 140-236 (242)
194 PF13380 CoA_binding_2: CoA bi 54.9 14 0.0003 31.4 3.3 39 228-266 64-103 (116)
195 PF06506 PrpR_N: Propionate ca 52.4 75 0.0016 28.9 8.0 106 231-383 65-172 (176)
196 COG1877 OtsB Trehalose-6-phosp 52.1 72 0.0016 31.4 8.2 66 187-263 11-77 (266)
197 PF12710 HAD: haloacid dehalog 50.8 6.8 0.00015 35.7 0.8 14 65-78 1-14 (192)
198 TIGR01452 PGP_euk phosphoglyco 50.4 52 0.0011 32.4 7.1 43 303-345 203-247 (279)
199 PF12689 Acid_PPase: Acid Phos 49.1 68 0.0015 29.2 7.0 40 228-267 46-86 (169)
200 KOG2914 Predicted haloacid-hal 47.4 39 0.00084 32.3 5.4 98 228-341 93-191 (222)
201 CHL00200 trpA tryptophan synth 46.0 1.1E+02 0.0024 30.0 8.5 43 305-347 187-233 (263)
202 COG0279 GmhA Phosphoheptose is 44.6 65 0.0014 29.2 5.9 60 172-255 89-148 (176)
203 PLN02151 trehalose-phosphatase 44.0 35 0.00075 35.1 4.7 62 307-372 269-342 (354)
204 PF00389 2-Hacid_dh: D-isomer 41.7 2.2E+02 0.0048 24.2 11.0 36 309-345 52-89 (133)
205 TIGR03849 arch_ComA phosphosul 39.0 73 0.0016 30.7 5.8 67 230-323 41-117 (237)
206 COG2503 Predicted secreted aci 38.9 1.5E+02 0.0031 28.8 7.6 84 228-336 123-210 (274)
207 cd04728 ThiG Thiazole synthase 38.5 2.8E+02 0.0061 26.9 9.6 51 213-263 90-143 (248)
208 PLN02591 tryptophan synthase 36.8 1.6E+02 0.0035 28.6 8.0 42 305-346 174-219 (250)
209 PRK00208 thiG thiazole synthas 36.5 3.2E+02 0.007 26.6 9.7 52 212-263 89-143 (250)
210 PF02358 Trehalose_PPase: Treh 36.1 28 0.00061 33.3 2.6 57 306-362 164-234 (235)
211 TIGR00262 trpA tryptophan synt 35.3 1.9E+02 0.0041 28.2 8.2 39 226-264 123-163 (256)
212 PF14336 DUF4392: Domain of un 34.2 1E+02 0.0022 30.7 6.3 38 230-267 63-101 (291)
213 TIGR01460 HAD-SF-IIA Haloacid 33.8 49 0.0011 31.7 3.9 47 220-266 7-57 (236)
214 KOG2882 p-Nitrophenyl phosphat 33.7 67 0.0015 32.0 4.7 48 220-267 31-81 (306)
215 COG1778 Low specificity phosph 33.2 26 0.00056 31.5 1.6 27 56-82 2-28 (170)
216 PRK11033 zntA zinc/cadmium/mer 33.2 3.8E+02 0.0082 30.6 11.4 45 372-416 685-731 (741)
217 cd00860 ThrRS_anticodon ThrRS 32.9 92 0.002 24.2 4.8 47 221-267 6-53 (91)
218 cd02071 MM_CoA_mut_B12_BD meth 32.9 76 0.0017 26.9 4.5 79 188-267 22-104 (122)
219 PRK14174 bifunctional 5,10-met 32.7 1.4E+02 0.003 29.9 6.8 63 300-362 138-214 (295)
220 PRK15108 biotin synthase; Prov 32.7 4.5E+02 0.0097 26.8 10.9 116 180-332 79-200 (345)
221 PRK15424 propionate catabolism 31.6 5.9E+02 0.013 27.9 12.0 70 231-330 95-165 (538)
222 TIGR00288 conserved hypothetic 31.4 3.9E+02 0.0086 24.1 11.2 93 182-328 43-138 (160)
223 PRK01045 ispH 4-hydroxy-3-meth 30.7 5E+02 0.011 26.0 10.4 30 177-206 97-126 (298)
224 COG0078 ArgF Ornithine carbamo 30.6 3.5E+02 0.0075 27.2 9.1 24 244-267 100-123 (310)
225 PRK14179 bifunctional 5,10-met 30.1 1E+02 0.0023 30.6 5.5 64 300-363 137-210 (284)
226 TIGR02471 sucr_syn_bact_C sucr 29.9 40 0.00088 32.1 2.6 34 233-267 21-54 (236)
227 TIGR00216 ispH_lytB (E)-4-hydr 29.9 5.6E+02 0.012 25.4 10.9 138 177-345 97-262 (280)
228 COG3707 AmiR Response regulato 29.4 2.1E+02 0.0046 26.6 6.9 79 186-268 22-102 (194)
229 PLN02645 phosphoglycolate phos 29.2 73 0.0016 32.0 4.4 59 311-371 239-307 (311)
230 PF02679 ComA: (2R)-phospho-3- 29.1 76 0.0017 30.8 4.2 110 228-366 52-172 (244)
231 cd02067 B12-binding B12 bindin 28.6 67 0.0015 26.9 3.4 80 187-267 21-104 (119)
232 PF03129 HGTP_anticodon: Antic 28.3 94 0.002 24.6 4.1 49 219-267 2-54 (94)
233 COG4996 Predicted phosphatase 28.0 1.3E+02 0.0028 26.3 4.9 57 211-267 19-81 (164)
234 PRK13671 hypothetical protein; 27.6 2.3E+02 0.0049 28.4 7.4 96 218-336 2-110 (298)
235 PRK14184 bifunctional 5,10-met 27.4 2.5E+02 0.0055 27.9 7.6 62 300-361 136-211 (286)
236 cd05017 SIS_PGI_PMI_1 The memb 27.3 1E+02 0.0023 25.8 4.4 37 228-266 55-91 (119)
237 KOG3109 Haloacid dehalogenase- 26.8 2.2E+02 0.0048 27.2 6.6 108 218-341 90-200 (244)
238 COG0309 HypE Hydrogenase matur 25.0 3.1E+02 0.0067 27.9 7.7 85 221-327 219-307 (339)
239 PF02401 LYTB: LytB protein; 24.6 1E+02 0.0022 30.6 4.3 155 162-346 72-264 (281)
240 PRK14175 bifunctional 5,10-met 24.3 1.3E+02 0.0028 30.0 4.9 45 224-268 11-64 (286)
241 PF12017 Tnp_P_element: Transp 24.2 1.1E+02 0.0023 29.6 4.3 37 232-268 198-234 (236)
242 TIGR01501 MthylAspMutase methy 24.2 1.9E+02 0.0042 25.2 5.5 80 188-267 24-112 (134)
243 TIGR00612 ispG_gcpE 1-hydroxy- 24.1 2.1E+02 0.0046 29.1 6.4 146 178-345 149-315 (346)
244 PLN02423 phosphomannomutase 24.1 1.1E+02 0.0024 29.4 4.5 30 227-257 24-53 (245)
245 PRK02261 methylaspartate mutas 24.0 1.6E+02 0.0034 25.7 5.0 80 187-266 25-113 (137)
246 cd00859 HisRS_anticodon HisRS 24.0 1.4E+02 0.0031 22.7 4.4 46 221-266 6-52 (91)
247 PRK14169 bifunctional 5,10-met 23.8 1.4E+02 0.003 29.7 5.0 44 225-268 10-62 (282)
248 PF08645 PNK3P: Polynucleotide 23.8 63 0.0014 29.0 2.5 23 229-251 31-53 (159)
249 PRK04302 triosephosphate isome 23.7 2.8E+02 0.006 26.2 7.1 100 229-347 100-204 (223)
250 PLN02151 trehalose-phosphatase 23.6 1.7E+02 0.0038 30.0 5.8 33 228-261 121-153 (354)
251 PRK14170 bifunctional 5,10-met 23.3 1.4E+02 0.003 29.8 4.9 45 224-268 10-63 (284)
252 PRK13670 hypothetical protein; 23.1 2.7E+02 0.0058 29.1 7.3 97 217-337 2-112 (388)
253 COG2217 ZntA Cation transport 23.0 1.1E+03 0.025 26.7 13.6 164 175-415 535-701 (713)
254 KOG0207 Cation transport ATPas 22.9 8.4E+02 0.018 28.4 11.2 161 176-414 722-884 (951)
255 PRK13111 trpA tryptophan synth 22.7 7.2E+02 0.016 24.2 11.3 28 305-332 185-212 (258)
256 cd05014 SIS_Kpsf KpsF-like pro 22.7 4.5E+02 0.0097 21.8 9.5 27 229-255 60-86 (128)
257 PRK11840 bifunctional sulfur c 22.7 2E+02 0.0044 29.1 5.9 52 212-263 163-217 (326)
258 PF07287 DUF1446: Protein of u 22.7 3.5E+02 0.0076 28.0 7.9 40 228-267 56-100 (362)
259 cd04906 ACT_ThrD-I_1 First of 22.4 82 0.0018 24.8 2.6 35 220-254 42-77 (85)
260 KOG1618 Predicted phosphatase 22.3 8.1E+02 0.017 24.9 9.8 49 218-266 42-98 (389)
261 PRK10886 DnaA initiator-associ 22.3 3.4E+02 0.0074 25.3 7.2 58 174-255 91-148 (196)
262 PRK10444 UMP phosphatase; Prov 22.1 97 0.0021 30.0 3.6 42 304-345 176-219 (248)
263 TIGR00676 fadh2 5,10-methylene 21.9 2E+02 0.0042 28.3 5.8 41 215-255 58-99 (272)
264 TIGR00129 fdhD_narQ formate de 21.8 1.5E+02 0.0033 28.6 4.8 36 232-267 181-216 (237)
265 PF06941 NT5C: 5' nucleotidase 21.8 74 0.0016 29.3 2.6 28 227-254 73-100 (191)
266 COG1832 Predicted CoA-binding 21.0 1.4E+02 0.0031 26.2 3.9 34 217-250 17-50 (140)
267 cd05013 SIS_RpiR RpiR-like pro 20.9 4.5E+02 0.0098 21.8 7.4 26 230-255 74-99 (139)
268 PRK00724 formate dehydrogenase 20.9 1.6E+02 0.0035 28.8 4.9 35 232-266 210-244 (263)
269 cd01994 Alpha_ANH_like_IV This 20.8 4.8E+02 0.01 24.2 7.8 37 231-267 11-60 (194)
270 cd02070 corrinoid_protein_B12- 20.6 66 0.0014 30.0 2.0 79 187-267 104-186 (201)
271 PF02219 MTHFR: Methylenetetra 20.2 1E+02 0.0023 30.5 3.5 39 217-255 72-111 (287)
No 1
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-107 Score=828.05 Aligned_cols=498 Identities=75% Similarity=1.106 Sum_probs=477.9
Q ss_pred CcccccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEE
Q 010523 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTV 80 (508)
Q Consensus 1 ~~~~~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v 80 (508)
||+++++.|+.++.++++++|+++|.|||++++++|++|+++|+++|+++|+++|+|+|+++|++|+|||||||.|+++|
T Consensus 266 my~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSv 345 (942)
T KOG0205|consen 266 MYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSV 345 (942)
T ss_pred hhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceec
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEE
Q 010523 81 DKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRV 160 (508)
Q Consensus 81 ~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~ 160 (508)
++..++.+..+.++|.+++.|+++++.+|+|++|+|++++++||++++.+|++++|+||||.+||.+.+|.+++|+++++
T Consensus 346 dknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~ 425 (942)
T KOG0205|consen 346 DKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRV 425 (942)
T ss_pred CcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHH
Q 010523 161 TKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240 (508)
Q Consensus 161 ~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~ 240 (508)
+||+|++|++.|+.+.++++++++.+++|+++|+|.|+||++.+|+..+++.+.+|+|+|++++.||||+++.++|++..
T Consensus 426 sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral 505 (942)
T KOG0205|consen 426 SKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRAL 505 (942)
T ss_pred cCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCC
Q 010523 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNH 320 (508)
Q Consensus 241 ~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~ 320 (508)
..|+.|.|+|||....++++++++|+.+|++++..+.|...++.+...++++++++++.||.+.|+||+++|+.||++||
T Consensus 506 ~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~h 585 (942)
T KOG0205|consen 506 NLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKH 585 (942)
T ss_pred hccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Q 010523 321 ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDG--------- 391 (508)
Q Consensus 321 ~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~--------- 391 (508)
.|+|+|||+||+|+||+||+|||+.+++|+|+.++|||+++++++.|+.++..||.+|+||++|.+|++..
T Consensus 586 i~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfm 665 (942)
T KOG0205|consen 586 IVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFM 665 (942)
T ss_pred eecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999887721
Q ss_pred --------------------------------------------------------------------------------
Q 010523 392 -------------------------------------------------------------------------------- 391 (508)
Q Consensus 392 -------------------------------------------------------------------------------- 391 (508)
T Consensus 666 l~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~~tvif~w~~~~t~ff~~~f 745 (942)
T KOG0205|consen 666 LIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAIMTVIFFWAAYTTDFFPRTF 745 (942)
T ss_pred HHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHHHHHHHhhhhcccccccccc
Confidence
Q ss_pred -----------HHHHHHHHHhh----------------------------------------------------------
Q 010523 392 -----------LSSTEFIQVLE---------------------------------------------------------- 402 (508)
Q Consensus 392 -----------~~~~i~~~~~~---------------------------------------------------------- 402 (508)
+++++|+++++
T Consensus 746 ~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatliavya~w~~a~i~~igw~w~g 825 (942)
T KOG0205|consen 746 GVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIAVYANWSFARITGIGWGWAG 825 (942)
T ss_pred ceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHHHHheecccceecceeeeee
Confidence 55555555555
Q ss_pred ------ccccccHHHHHHH---------------HHhhcccccccchhHHHHHHHHhhcccccCCCCCCccccccccccc
Q 010523 403 ------LNFLFTLDTVIAI---------------LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPPDTSMFSVRSSYGE 461 (508)
Q Consensus 403 ------~~~~~pl~~~~~l---------------~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~ 461 (508)
+..|+|++.+.+. ...+|++...||.++++++|+..||++||++++++ +|
T Consensus 826 viw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~~~qrt~~~lq~~~~---------~~ 896 (942)
T KOG0205|consen 826 VIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEG---------RE 896 (942)
T ss_pred eEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHHHhhhhhcccCCCcc---------ch
Confidence 4578888888875 24567778899999999999999999999999951 68
Q ss_pred cchhHHHHHhhhhHHhhhhhhhcchhhhhhhhccCCChhhhhccccC
Q 010523 462 LSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 508 (508)
Q Consensus 462 ~~~~~~~~~rr~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 508 (508)
+|+++||++||+|++||||+||||||+|||+||||+|+++| |||||
T Consensus 897 ~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 897 LSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred hhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 99999999999999999999999999999999999999999 99997
No 2
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-82 Score=712.12 Aligned_cols=445 Identities=30% Similarity=0.448 Sum_probs=382.0
Q ss_pred cHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeec
Q 010523 8 EYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEI 87 (508)
Q Consensus 8 ~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~ 87 (508)
+|.+.+..++++.++++|++||+.++++++.|+.+|+++++++|+++++|+||++|+||||||||||+|+|+|.++++..
T Consensus 294 ~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~ 373 (917)
T COG0474 294 GLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYING 373 (917)
T ss_pred cHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCC
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999988752
Q ss_pred ccCCCC---------hHHHHHHHHHhcccC--------CCChHHHHHHhhhcCc------hhhhccceEEEEecCCCCCc
Q 010523 88 FAGGVD---------ADTVVLMAARASQVE--------NLDVIDAAIVGMLADP------KEARADIQEVHFLPFDPTGK 144 (508)
Q Consensus 88 ~~~~~~---------~~~~l~~aa~~~~~~--------~~~~~~~ai~~~~~~~------~~~~~~~~~~~~~pf~~~~k 144 (508)
.....+ ...++..++.|+... ..||.|.|++.++.+. ...+..+++++++||+|.+|
T Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rK 453 (917)
T COG0474 374 GGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERK 453 (917)
T ss_pred CcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCce
Confidence 111111 113566677776432 3589999999988643 23344556799999999999
Q ss_pred eEEEEEEecCCeEEEEEcCcHHHHHhhhcC-------ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc----cCCC
Q 010523 145 RTALTYIDSEGKMHRVTKGSPEQILNLLHN-------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK----ESSG 213 (508)
Q Consensus 145 r~s~~~~~~~g~~~~~~kGa~e~il~~~~~-------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~----~~~e 213 (508)
||++++++.+|+++.++|||||.|+++|.. .++..+.+.+..++|+++|||++++||+.++..+. +..|
T Consensus 454 rMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E 533 (917)
T COG0474 454 RMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIE 533 (917)
T ss_pred EEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhh
Confidence 999999987888999999999999999973 45677889999999999999999999998765544 5789
Q ss_pred CCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHH
Q 010523 214 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 293 (508)
Q Consensus 214 ~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (508)
+++.|+|+++++||||++++++|+.|+++||+|||+||||..||+++|++||+..+.....+++|.+.+...++ ++.+.
T Consensus 534 ~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~-el~~~ 612 (917)
T COG0474 534 SDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDE-ELAEL 612 (917)
T ss_pred ccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHH-HHHHH
Confidence 99999999999999999999999999999999999999999999999999999766444557777776644333 66778
Q ss_pred hhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHH
Q 010523 294 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 294 ~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
+++..+|||++|+||.++|+.||++|+.|+|+|||+||+||||+|||||||+ +|+|+||++||+++++++|..+..+|+
T Consensus 613 ~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~ 692 (917)
T COG0474 613 VEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVV 692 (917)
T ss_pred hhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHH
Confidence 8888999999999999999999999999999999999999999999999999 699999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhcc--ccccHHHHHHH-HHhhcccccccchhHHHHHHHHhhcccccCCCC
Q 010523 373 ISRAIFQRMRNYMVRGIDGLSSTE-FIQVLELN--FLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 448 (508)
Q Consensus 373 ~~R~~~~~i~~~~~~~~~~~~~~i-~~~~~~~~--~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 448 (508)
+||++|+|++|++.|.+..+...+ +..+..++ .+.|+.++|++ ++++++.+|++.++.+++.++.|.++|++...+
T Consensus 693 eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~ 772 (917)
T COG0474 693 EGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEG 772 (917)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCcccc
Confidence 999999999999999998665533 33333333 24799999999 777788999999999989999999996644443
Q ss_pred CCcccccc
Q 010523 449 DTSMFSVR 456 (508)
Q Consensus 449 ~~~~~~~~ 456 (508)
+|+.+
T Consensus 773 ---i~~~~ 777 (917)
T COG0474 773 ---LFNRK 777 (917)
T ss_pred ---ccchh
Confidence 56433
No 3
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-80 Score=648.13 Aligned_cols=441 Identities=26% Similarity=0.398 Sum_probs=367.8
Q ss_pred ccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeee
Q 010523 7 REYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIE 86 (508)
Q Consensus 7 ~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~ 86 (508)
+.+.+-+..++++-+++||++||.++++++|.|.+||+|++++||++.++|+||.+++||+|||||||+|+|+|.+.|+.
T Consensus 277 k~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~ 356 (972)
T KOG0202|consen 277 KGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIP 356 (972)
T ss_pred hchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEec
Confidence 34445577889999999999999999999999999999999999999999999999999999999999999999998762
Q ss_pred ccc-----------CCC------------------Ch---HHHHHHHHHhcccC-----------CCChHHHHHHhhhcC
Q 010523 87 IFA-----------GGV------------------DA---DTVVLMAARASQVE-----------NLDVIDAAIVGMLAD 123 (508)
Q Consensus 87 ~~~-----------~~~------------------~~---~~~l~~aa~~~~~~-----------~~~~~~~ai~~~~~~ 123 (508)
... .++ +. .+++.+++.|+... ...|.+.|+..++..
T Consensus 357 ~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeK 436 (972)
T KOG0202|consen 357 DGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEK 436 (972)
T ss_pred ccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHH
Confidence 210 001 11 23445555554211 234677777655421
Q ss_pred c-----h---h-----------hhccceEEEEecCCCCCceEEEEEEecCCe--EEEEEcCcHHHHHhhhc---------
Q 010523 124 P-----K---E-----------ARADIQEVHFLPFDPTGKRTALTYIDSEGK--MHRVTKGSPEQILNLLH--------- 173 (508)
Q Consensus 124 ~-----~---~-----------~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~--~~~~~kGa~e~il~~~~--------- 173 (508)
- . . ....++.+..+||++.+|+|++.+.+..|+ ...|.|||+|.++++|+
T Consensus 437 m~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~ 516 (972)
T KOG0202|consen 437 MGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQT 516 (972)
T ss_pred cCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCce
Confidence 1 0 0 112334568999999999999999986664 68899999999999994
Q ss_pred ---CChhHHHHHHHHHHHHHHccCeeEEEEeeecCC-----------CCccCCCCCcEEEEEeccCCCCCcchHHHHHHH
Q 010523 174 ---NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPE-----------GSKESSGSPWQFIGLIPLFDPPIHDSAETIRRA 239 (508)
Q Consensus 174 ---~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~-----------~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l 239 (508)
.++..++.+.+...+++++|||||++|+++.+. ..+...|++|+|+|++++.||||++++++|+.|
T Consensus 517 ~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c 596 (972)
T KOG0202|consen 517 KVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELC 596 (972)
T ss_pred eeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHH
Confidence 234567889999999999999999999997763 124567899999999999999999999999999
Q ss_pred HhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhh
Q 010523 240 LSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQA 317 (508)
Q Consensus 240 ~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~ 317 (508)
+++||+|+|+|||+.+||++||+++|+..+.. ....++|++.++ +...+.++...+..+|+|++|.||.+||+.||+
T Consensus 597 ~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~-ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~ 675 (972)
T KOG0202|consen 597 RQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDD-LSDEELDDAVRRVLVFARAEPQHKLKIVEALQS 675 (972)
T ss_pred HHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhc-CCHHHHHHHhhcceEEEecCchhHHHHHHHHHh
Confidence 99999999999999999999999999976543 456777777663 334455677888899999999999999999999
Q ss_pred cCCEEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 318 RNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTE 396 (508)
Q Consensus 318 ~g~~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i 396 (508)
+|.+|+|+|||+||+||||.|||||||| +|+++||+|||+||.||||+.|+.||++||.+|.||++|+.|.+..+...+
T Consensus 676 ~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev 755 (972)
T KOG0202|consen 676 RGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEV 755 (972)
T ss_pred cCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHH
Confidence 9999999999999999999999999999 899999999999999999999999999999999999999999998655444
Q ss_pred -HHHHhhcc-ccccHHHHHHH-HHhhcccccccchhHHHHHHHHhhcccccCCCC
Q 010523 397 -FIQVLELN-FLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 448 (508)
Q Consensus 397 -~~~~~~~~-~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 448 (508)
+++++..+ .-.||.++|+| .++..+.+|.-++|.++...++|.||||....|
T Consensus 756 ~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~ 810 (972)
T KOG0202|consen 756 VLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDG 810 (972)
T ss_pred HHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCC
Confidence 44455544 45899999999 455556999999999999999999999977665
No 4
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-81 Score=655.79 Aligned_cols=485 Identities=21% Similarity=0.310 Sum_probs=411.0
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecccC
Q 010523 11 TGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG 90 (508)
Q Consensus 11 ~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~ 90 (508)
+-+...+.++++++|++||+++++++|+++++|.+++.+||+++|||+||+.++||+|||||||+|+|+|.+.|+....+
T Consensus 384 ~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~ 463 (1034)
T KOG0204|consen 384 KFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHY 463 (1034)
T ss_pred HHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccc
Confidence 44555566788999999999999999999999999999999999999999999999999999999999999988633211
Q ss_pred C--------CChHH--HHHH-HHHhccc-------------CCCChHHHHHHhhhc----CchhhhccceEEEEecCCCC
Q 010523 91 G--------VDADT--VVLM-AARASQV-------------ENLDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPT 142 (508)
Q Consensus 91 ~--------~~~~~--~l~~-aa~~~~~-------------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~pf~~~ 142 (508)
. .++.. ++.. .+..+.. -..+|.++|++++.. +....|...+..+++||||.
T Consensus 464 k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~ 543 (1034)
T KOG0204|consen 464 KVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSV 543 (1034)
T ss_pred cccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcc
Confidence 1 22211 1111 1111100 123688999998753 44455677789999999999
Q ss_pred CceEEEEEEecCCeEEEEEcCcHHHHHhhhcC-----------ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCC---
Q 010523 143 GKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS--- 208 (508)
Q Consensus 143 ~kr~s~~~~~~~g~~~~~~kGa~e~il~~~~~-----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~--- 208 (508)
+|+|+++++.++|..+.++|||.|.++..|.. +++....++..++.|+.+|||++|+||+++.+..
T Consensus 544 kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~ 623 (1034)
T KOG0204|consen 544 KKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEE 623 (1034)
T ss_pred cceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCC
Confidence 99999999987776349999999999999962 3445568999999999999999999999864331
Q ss_pred -----ccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhh
Q 010523 209 -----KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDE 283 (508)
Q Consensus 209 -----~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~ 283 (508)
.+.++.+++++|+++++||.|||++++|+.|+++||.|.|+||||..||++||.+|||.+.......+.|.+..
T Consensus 624 ~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr- 702 (1034)
T KOG0204|consen 624 PSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFR- 702 (1034)
T ss_pred CCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhh-
Confidence 13457899999999999999999999999999999999999999999999999999998776666777777766
Q ss_pred hhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCC
Q 010523 284 SIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEP 362 (508)
Q Consensus 284 ~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~ 362 (508)
.+.+.+.++++.+..++||.+|.+|.-+|+.|+.+|++|+++|||.||+|||++||||.||| .|+++||++|||||+||
T Consensus 703 ~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DD 782 (1034)
T KOG0204|consen 703 ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDD 782 (1034)
T ss_pred hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcC
Confidence 45566778899999999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--ccccccHHHHHHH-HHhhcccccccchhHHHHHHHHhh
Q 010523 363 GLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLE--LNFLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQ 439 (508)
Q Consensus 363 ~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~--~~~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~ 439 (508)
||++|+.++.|||.+|.||+||++|.++.+..|+...+.. ...-.||..+|+| .++++.....+++..|++...+|.
T Consensus 783 NFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~ 862 (1034)
T KOG0204|consen 783 NFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMK 862 (1034)
T ss_pred chHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhc
Confidence 9999999999999999999999999997665555444433 2367999999999 788999999999999999999999
Q ss_pred cccccCCCCCCccccccccccccchhHHHHHhhhhHHhhhhhhhcchhhhhhhhccCCChhhhhccccC
Q 010523 440 RTLHGLQPPDTSMFSVRSSYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 508 (508)
Q Consensus 440 ~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 508 (508)
|+|+|...| +-.+++++.+- -+...||--+-.|+..-++..-+.+.+...-.+|||+
T Consensus 863 RkP~GR~~~----LIt~tMwknil--------~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTi 919 (1034)
T KOG0204|consen 863 RKPVGRTKP----LITRTMWKNIL--------GQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTI 919 (1034)
T ss_pred CCCCCCCCc----chHHHHHHHHH--------HHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheee
Confidence 999999999 55788888777 7888999999999999998887777776544556653
No 5
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=5.4e-77 Score=669.88 Aligned_cols=435 Identities=26% Similarity=0.412 Sum_probs=370.8
Q ss_pred ccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeee
Q 010523 5 QHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNL 84 (508)
Q Consensus 5 ~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~ 84 (508)
.+++|.+++.+++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.+
T Consensus 312 ~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~ 391 (903)
T PRK15122 312 TKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHL 391 (903)
T ss_pred ccCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEE
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999998864
Q ss_pred eecccCCCChHHHHHHHHHhcc--cCCCChHHHHHHhhhcCch--hhhccceEEEEecCCCCCceEEEEEEecCCeEEEE
Q 010523 85 IEIFAGGVDADTVVLMAARASQ--VENLDVIDAAIVGMLADPK--EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRV 160 (508)
Q Consensus 85 i~~~~~~~~~~~~l~~aa~~~~--~~~~~~~~~ai~~~~~~~~--~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~ 160 (508)
. ..+.+.++++.+++.++. ....||++.|++.++.... ..+..++.++++||++.+|+|++++++.+|+++.+
T Consensus 392 ~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~ 468 (903)
T PRK15122 392 D---VSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLI 468 (903)
T ss_pred c---CCCCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEE
Confidence 2 123345667777665432 2235799999999875432 12345788899999999999999988777888999
Q ss_pred EcCcHHHHHhhhcC----------ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc-----cCCCCCcEEEEEeccC
Q 010523 161 TKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-----ESSGSPWQFIGLIPLF 225 (508)
Q Consensus 161 ~kGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~-----~~~e~~l~~lG~i~l~ 225 (508)
+||+||.++++|.. +++..+++.+..++++.+|+|++++||++++..+. +..|++++|+|+++++
T Consensus 469 ~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~ 548 (903)
T PRK15122 469 CKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFL 548 (903)
T ss_pred ECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEecc
Confidence 99999999999962 22345667888899999999999999998865321 2357899999999999
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
||||++++++|++|+++||+|+|+|||+..+|.++|+++||.. ..+++|.+.+. ++..++.+.+++..+|||++|
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~~vi~G~el~~-~~~~el~~~v~~~~VfAr~sP 623 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----GEPLLGTEIEA-MDDAALAREVEERTVFAKLTP 623 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----CCccchHhhhh-CCHHHHHHHhhhCCEEEEeCH
Confidence 9999999999999999999999999999999999999999953 34566666543 344467778888999999999
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHH
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYM 385 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~ 385 (508)
+||.++|+.||++|++|+|+|||+||+|||++|||||||++|+|.|+++||+||++++|+.|+.++++||++|+||+||+
T Consensus 624 e~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i 703 (903)
T PRK15122 624 LQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYL 703 (903)
T ss_pred HHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-h-hccccccHHHHHHHHHhhcccccccchhHHHHHHHHhhcccccCCCC
Q 010523 386 VRGIDGLSSTEFIQV-L-ELNFLFTLDTVIAILQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 448 (508)
Q Consensus 386 ~~~~~~~~~~i~~~~-~-~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 448 (508)
.|.+..++..++..+ . .+..++|+.++|+||..+++-.+.++++.+++..+.| |+|+....+
T Consensus 704 ~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~~~lal~~d~~~~~~m-~~P~~~~~~ 767 (903)
T PRK15122 704 NMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDISQLSLPWDKMDKEFL-RKPRKWDAK 767 (903)
T ss_pred HHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhhcCCCCCHhhc-CCCCCCChh
Confidence 999976554443322 2 2335589999999966666656899999999999999 999755444
No 6
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=3.6e-77 Score=670.38 Aligned_cols=432 Identities=27% Similarity=0.427 Sum_probs=370.8
Q ss_pred cccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEee
Q 010523 4 IQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKN 83 (508)
Q Consensus 4 ~~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~ 83 (508)
+.+++|.+++..++++++++|||+||++++++++.|+++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+.
T Consensus 313 ~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~ 392 (902)
T PRK10517 313 YTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENH 392 (902)
T ss_pred HhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEE
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred eeecccCCCChHHHHHHHHHhccc--CCCChHHHHHHhhhcCch--hhhccceEEEEecCCCCCceEEEEEEecCCeEEE
Q 010523 84 LIEIFAGGVDADTVVLMAARASQV--ENLDVIDAAIVGMLADPK--EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHR 159 (508)
Q Consensus 84 ~i~~~~~~~~~~~~l~~aa~~~~~--~~~~~~~~ai~~~~~~~~--~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~ 159 (508)
+ . ..+.+.++++..++.++.. ...||+|.|++.++.... .....++.++++||++.+|+|++++.+.++..+.
T Consensus 393 ~-~--~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~ 469 (902)
T PRK10517 393 T-D--ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQL 469 (902)
T ss_pred e-c--CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEE
Confidence 3 1 1234556777777765432 235799999998865322 2345678899999999999999988877777889
Q ss_pred EEcCcHHHHHhhhcC----------ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc---cCCCCCcEEEEEeccCC
Q 010523 160 VTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK---ESSGSPWQFIGLIPLFD 226 (508)
Q Consensus 160 ~~kGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~---~~~e~~l~~lG~i~l~D 226 (508)
++||+||.++++|.. +++..+.+.+..++++++|+|++++||++++..+. ...|++++|+|+++|+|
T Consensus 470 ~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~D 549 (902)
T PRK10517 470 ICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLD 549 (902)
T ss_pred EEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhC
Confidence 999999999999963 22345667788899999999999999998764322 12367999999999999
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
|||++++++|++|+++||+|+|+|||++.+|.++|+++||.. ..++.|.+.+ .++..++.+.+++..+|||++|+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~~v~~G~el~-~l~~~el~~~~~~~~VfAr~sPe 624 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----GEVLIGSDIE-TLSDDELANLAERTTLFARLTPM 624 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----cCceeHHHHH-hCCHHHHHHHHhhCcEEEEcCHH
Confidence 999999999999999999999999999999999999999952 3466666554 34445677788899999999999
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMV 386 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~ 386 (508)
||.++|+.||++|++|+|+|||+||+|||++|||||||++|+|.|+++||+||++++|..|++++++||++|+||+||+.
T Consensus 625 ~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~ 704 (902)
T PRK10517 625 HKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIK 704 (902)
T ss_pred HHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-h-ccccccHHHHHHHHHhhcccccccchhHHHHHHHHhhcccc
Q 010523 387 RGIDGLSSTEFIQVL-E-LNFLFTLDTVIAILQTAFTSKKDFGKEERELLWAHAQRTLH 443 (508)
Q Consensus 387 ~~~~~~~~~i~~~~~-~-~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 443 (508)
|.+..++..++..+. . +..++|+.++|+||..+++-.+.++++.++..++.|+|||+
T Consensus 705 ~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d~~~~~~m~~p~r 763 (902)
T PRK10517 705 MTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQR 763 (902)
T ss_pred HHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCCCCChhhhcCCCC
Confidence 999876655544432 2 23457999999996666666788999999999999999887
No 7
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.4e-76 Score=657.87 Aligned_cols=419 Identities=52% Similarity=0.806 Sum_probs=360.5
Q ss_pred ccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeee
Q 010523 5 QHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNL 84 (508)
Q Consensus 5 ~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~ 84 (508)
.+.+|.+++.+++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.+
T Consensus 229 ~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~ 308 (755)
T TIGR01647 229 RGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEIL 308 (755)
T ss_pred cCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEE
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred eecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecC-CeEEEEEcC
Q 010523 85 IEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSE-GKMHRVTKG 163 (508)
Q Consensus 85 i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~-g~~~~~~kG 163 (508)
.. ..+.+.++++.+++.+++..+.||++.|++.++.+....+..++.++++||++.+|+|++++.+.+ |+.+.++||
T Consensus 309 ~~--~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kG 386 (755)
T TIGR01647 309 PF--FNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKG 386 (755)
T ss_pred ec--CCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeC
Confidence 32 223667888888887765556789999999987765544566888999999999999999887654 777889999
Q ss_pred cHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCC
Q 010523 164 SPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLG 243 (508)
Q Consensus 164 a~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~G 243 (508)
+||.+++.|....+..+++++.+++++.+|+|++++||++ .+++|+|+|+++|+||||+|++++|++|+++|
T Consensus 387 a~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aG 458 (755)
T TIGR01647 387 APQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLG 458 (755)
T ss_pred ChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCC
Confidence 9999999998776777888899999999999999999973 26789999999999999999999999999999
Q ss_pred CcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEE
Q 010523 244 LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICG 323 (508)
Q Consensus 244 i~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~ 323 (508)
|+|+|+|||++.+|.++|+++||..+.+....+......+.+...++++++++.++|||++|+||.++|+.||++|++|+
T Consensus 459 I~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~Va 538 (755)
T TIGR01647 459 VEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVG 538 (755)
T ss_pred CeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEE
Confidence 99999999999999999999999764332222211111223344456788889999999999999999999999999999
Q ss_pred EEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Q 010523 324 MIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQ-VLE 402 (508)
Q Consensus 324 ~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~-~~~ 402 (508)
|+|||+||+|||++|||||||++++|.|+++||+||++++|+.|+.++++||++|+||+||+.|.+..++..++.. +..
T Consensus 539 mvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~ 618 (755)
T TIGR01647 539 MTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLI 618 (755)
T ss_pred EEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998766554433 223
Q ss_pred ccccccHHHHHHHHHhhcccccccchhHHHH
Q 010523 403 LNFLFTLDTVIAILQTAFTSKKDFGKEEREL 433 (508)
Q Consensus 403 ~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~ 433 (508)
++..+|++++++|+..+++..+.++++.++.
T Consensus 619 l~~~~~l~~~~il~~~l~~d~~~~~l~~~~~ 649 (755)
T TIGR01647 619 LILNFYFPPIMVVIIAILNDGTIMTIAYDNV 649 (755)
T ss_pred HHhCcchhHHHHHHHHHHHhHhHhhccCCCC
Confidence 3334679999999666666666766665554
No 8
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=5.6e-76 Score=660.83 Aligned_cols=432 Identities=25% Similarity=0.410 Sum_probs=367.9
Q ss_pred cccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEee
Q 010523 4 IQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKN 83 (508)
Q Consensus 4 ~~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~ 83 (508)
+.+++|.+++..++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.
T Consensus 278 ~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~ 357 (867)
T TIGR01524 278 LMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKH 357 (867)
T ss_pred HhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEE
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred eeecccCCCChHHHHHHHHHhccc--CCCChHHHHHHhhhcCc--hhhhccceEEEEecCCCCCceEEEEEEecCCeEEE
Q 010523 84 LIEIFAGGVDADTVVLMAARASQV--ENLDVIDAAIVGMLADP--KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHR 159 (508)
Q Consensus 84 ~i~~~~~~~~~~~~l~~aa~~~~~--~~~~~~~~ai~~~~~~~--~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~ 159 (508)
+. ..+.+.++++.+++.++.. ...||++.|++.++.+. ...+..++.++.+||++.+|+|++++.+.++..+.
T Consensus 358 ~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~ 434 (867)
T TIGR01524 358 ID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRL 434 (867)
T ss_pred ec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEE
Confidence 31 2234566677777654432 23479999999887543 12345678889999999999999988876666789
Q ss_pred EEcCcHHHHHhhhcC----------ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc---cCCCCCcEEEEEeccCC
Q 010523 160 VTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK---ESSGSPWQFIGLIPLFD 226 (508)
Q Consensus 160 ~~kGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~---~~~e~~l~~lG~i~l~D 226 (508)
++||+||.++++|.. +++..+++.+.+++++++|+|++++||++++..+. +..|++|+|+|+++++|
T Consensus 435 ~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~D 514 (867)
T TIGR01524 435 ICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLD 514 (867)
T ss_pred EEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeC
Confidence 999999999999963 23345678888999999999999999998865432 12478899999999999
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
|||++++++|++|+++||+|+|+|||+..+|.++|+++||..+ .++.|.+.++ +...++.+.+++..+|||++|+
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~----~v~~g~~l~~-~~~~el~~~~~~~~vfAr~~Pe 589 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN----DFLLGADIEE-LSDEELARELRKYHIFARLTPM 589 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC----CeeecHhhhh-CCHHHHHHHhhhCeEEEECCHH
Confidence 9999999999999999999999999999999999999999632 3556655432 3344567778888999999999
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMV 386 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~ 386 (508)
||.++|+.+|++|++|+|+|||+||+|||++|||||||++|+|.|+++||+||++++|+.|+.++++||++|+||+||+.
T Consensus 590 ~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~ 669 (867)
T TIGR01524 590 QKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLK 669 (867)
T ss_pred HHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-h-ccccccHHHHHHHHHhhcccccccchhHHHHHHHHhhcccc
Q 010523 387 RGIDGLSSTEFIQVL-E-LNFLFTLDTVIAILQTAFTSKKDFGKEERELLWAHAQRTLH 443 (508)
Q Consensus 387 ~~~~~~~~~i~~~~~-~-~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 443 (508)
|.+..++..++..+. . +..++|+.++|+||..+++-.+.++++.+++..+.|++||+
T Consensus 670 ~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~~~~~~~m~~p~~ 728 (867)
T TIGR01524 670 MTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWDKMDREFLKKPHQ 728 (867)
T ss_pred HHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCCCCChHhhCCCCC
Confidence 999765555543332 2 23457999999996555555789999999999999987766
No 9
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=2e-75 Score=664.22 Aligned_cols=438 Identities=26% Similarity=0.394 Sum_probs=363.4
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecc-
Q 010523 10 RTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF- 88 (508)
Q Consensus 10 ~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~- 88 (508)
.+.+..+++++++++|++||++++++++.|+++|+++|++||+++++|+||++++||+|||||||+|+|+|.+.++...
T Consensus 307 ~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~ 386 (1053)
T TIGR01523 307 KEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFG 386 (1053)
T ss_pred HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCc
Confidence 5677788999999999999999999999999999999999999999999999999999999999999999998775310
Q ss_pred ----c---CCC---------------------------------------C---------hHHHHHHHHHhcccC-----
Q 010523 89 ----A---GGV---------------------------------------D---------ADTVVLMAARASQVE----- 108 (508)
Q Consensus 89 ----~---~~~---------------------------------------~---------~~~~l~~aa~~~~~~----- 108 (508)
. .++ + ..+++..++.|+...
T Consensus 387 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~ 466 (1053)
T TIGR01523 387 TISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDD 466 (1053)
T ss_pred eEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccC
Confidence 0 000 0 013555566664311
Q ss_pred -------CCChHHHHHHhhhcCch----------hh-------------------hccceEEEEecCCCCCceEEEEEEe
Q 010523 109 -------NLDVIDAAIVGMLADPK----------EA-------------------RADIQEVHFLPFDPTGKRTALTYID 152 (508)
Q Consensus 109 -------~~~~~~~ai~~~~~~~~----------~~-------------------~~~~~~~~~~pf~~~~kr~s~~~~~ 152 (508)
..||.|.|++.++.... .. +..++.++.+||+|.+|||++++++
T Consensus 467 ~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~ 546 (1053)
T TIGR01523 467 ATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYED 546 (1053)
T ss_pred CCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEe
Confidence 24899999998753211 00 2346789999999999999999987
Q ss_pred cCC-eEEEEEcCcHHHHHhhhcC------------ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCC-----------
Q 010523 153 SEG-KMHRVTKGSPEQILNLLHN------------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS----------- 208 (508)
Q Consensus 153 ~~g-~~~~~~kGa~e~il~~~~~------------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~----------- 208 (508)
.++ ++++|+|||||.|+++|.. +++.++++.+.+++|+++|+|||++||+.+++.+
T Consensus 547 ~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~ 626 (1053)
T TIGR01523 547 NHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETL 626 (1053)
T ss_pred CCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhcccc
Confidence 554 4789999999999999962 2234677888999999999999999999886432
Q ss_pred -ccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--------CCccccCC
Q 010523 209 -KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--------PSSALSGQ 279 (508)
Q Consensus 209 -~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--------~~~~~~~~ 279 (508)
++..|++|+|+|+++++||||++++++|+.|+++||+|+|+|||+..+|.++|+++||..... ...+++|.
T Consensus 627 ~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~ 706 (1053)
T TIGR01523 627 NRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGS 706 (1053)
T ss_pred chhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehH
Confidence 234578999999999999999999999999999999999999999999999999999964311 23466666
Q ss_pred chhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchh
Q 010523 280 DRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIV 358 (508)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADiv 358 (508)
+.+. +.+.++.++.++..+|||++|+||.++|+.+|++|+.|+|+|||+||+|||+.|||||||| +|++.|+++||++
T Consensus 707 ~l~~-l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADiv 785 (1053)
T TIGR01523 707 QFDA-LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIV 785 (1053)
T ss_pred Hhhh-cCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEE
Confidence 5542 3333456677788899999999999999999999999999999999999999999999999 8999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cc------ccccHHHHHHHH-HhhcccccccchhH
Q 010523 359 LTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLE-LN------FLFTLDTVIAIL-QTAFTSKKDFGKEE 430 (508)
Q Consensus 359 l~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~-~~------~~~pl~~~~~l~-~~~~~~~~~~~~~~ 430 (508)
+++++|+.|+.++.+||++|+|+++++.|.+..++..++..+.. ++ ..+|++++|+|| +++.+.+|.+.++.
T Consensus 786 l~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~ 865 (1053)
T TIGR01523 786 LSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGL 865 (1053)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999998766555444332 22 247999999995 55566899999999
Q ss_pred HHHHHHHhhcccccCCCC
Q 010523 431 RELLWAHAQRTLHGLQPP 448 (508)
Q Consensus 431 ~~~~~~~~~~~p~g~~~~ 448 (508)
+++..+.|+|+|+....+
T Consensus 866 e~~~~~~m~~~Pr~~~~~ 883 (1053)
T TIGR01523 866 EKAAPDLMDRLPHDNEVG 883 (1053)
T ss_pred CCCChhHHhcCCCCCCcc
Confidence 999999999999854433
No 10
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1.2e-74 Score=657.16 Aligned_cols=435 Identities=22% Similarity=0.347 Sum_probs=365.1
Q ss_pred cHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeec
Q 010523 8 EYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEI 87 (508)
Q Consensus 8 ~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~ 87 (508)
+|.+++..++++++++||||||+++|++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++...
T Consensus 322 ~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~ 401 (941)
T TIGR01517 322 TFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGE 401 (941)
T ss_pred HHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEec
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999876532
Q ss_pred cc---CC----CC--hHHHHHHHHHhcccC------------CCChHHHHHHhhhcC----chhhhccceEEEEecCCCC
Q 010523 88 FA---GG----VD--ADTVVLMAARASQVE------------NLDVIDAAIVGMLAD----PKEARADIQEVHFLPFDPT 142 (508)
Q Consensus 88 ~~---~~----~~--~~~~l~~aa~~~~~~------------~~~~~~~ai~~~~~~----~~~~~~~~~~~~~~pf~~~ 142 (508)
.. .+ .+ ..+++..++.++... ..||.|.|++.++.. ....+..++.++.+||++.
T Consensus 402 ~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~ 481 (941)
T TIGR01517 402 QRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSE 481 (941)
T ss_pred ceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCC
Confidence 10 00 01 122333333332211 246899999988642 2223445677889999999
Q ss_pred CceEEEEEEecCCeEEEEEcCcHHHHHhhhcCC----------hhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc---
Q 010523 143 GKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK----------SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK--- 209 (508)
Q Consensus 143 ~kr~s~~~~~~~g~~~~~~kGa~e~il~~~~~~----------~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~--- 209 (508)
+|+|+++++..+++++.++|||||.+++.|... .+..+.+.+.+++++++|+|++++||++++.++.
T Consensus 482 ~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~ 561 (941)
T TIGR01517 482 RKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK 561 (941)
T ss_pred CCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc
Confidence 999999998777778999999999999999531 0135678888999999999999999999864432
Q ss_pred cCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCC
Q 010523 210 ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALP 289 (508)
Q Consensus 210 ~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~ 289 (508)
+..|++|+|+|+++++||||++++++|++|+++||+|+|+|||+..+|.++|++|||..+. ..+++|.+.+. +...+
T Consensus 562 ~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~--~~vi~G~~~~~-l~~~e 638 (941)
T TIGR01517 562 DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFG--GLAMEGKEFRR-LVYEE 638 (941)
T ss_pred cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCC--ceEeeHHHhhh-CCHHH
Confidence 2347899999999999999999999999999999999999999999999999999996432 34566665543 33345
Q ss_pred hhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHH
Q 010523 290 VDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVII 368 (508)
Q Consensus 290 ~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~ 368 (508)
..+++++..+|||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||| +|+|.|+++||+++++++|+.|+
T Consensus 639 l~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~ 718 (941)
T TIGR01517 639 MDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIV 718 (941)
T ss_pred HHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHH
Confidence 66778888999999999999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--ccccccHHHHHHH-HHhhcccccccchhHHHHHHHHhhcccccC
Q 010523 369 TAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLE--LNFLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGL 445 (508)
Q Consensus 369 ~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~--~~~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~ 445 (508)
.++++||++|+|+++++.|.+..++..+.+.+.. +....|+++++++ ++++++.+|.+.++.+++..+.|+++|...
T Consensus 719 ~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~ 798 (941)
T TIGR01517 719 RAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGR 798 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCC
Confidence 9999999999999999999998777666555432 2356799999999 666666789999999999999999999743
No 11
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=7.4e-74 Score=652.58 Aligned_cols=440 Identities=23% Similarity=0.347 Sum_probs=367.1
Q ss_pred cccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEee
Q 010523 4 IQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKN 83 (508)
Q Consensus 4 ~~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~ 83 (508)
+.+.+|.+++.+++++++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.++
T Consensus 286 ~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~ 365 (997)
T TIGR01106 286 ILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHM 365 (997)
T ss_pred HhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEE
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred eeecc--c-CC--------CCh-----HHHHHHHHHhcccC---------------CCChHHHHHHhhhc----Cchhhh
Q 010523 84 LIEIF--A-GG--------VDA-----DTVVLMAARASQVE---------------NLDVIDAAIVGMLA----DPKEAR 128 (508)
Q Consensus 84 ~i~~~--~-~~--------~~~-----~~~l~~aa~~~~~~---------------~~~~~~~ai~~~~~----~~~~~~ 128 (508)
++... . .+ .+. +.++..++.|+... ..+|.|.|++.++. +....+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~ 445 (997)
T TIGR01106 366 WFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMR 445 (997)
T ss_pred EECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHH
Confidence 75211 0 00 111 24556677765321 24789999998764 223345
Q ss_pred ccceEEEEecCCCCCceEEEEEEec---CCeEEEEEcCcHHHHHhhhcC----------ChhHHHHHHHHHHHHHHccCe
Q 010523 129 ADIQEVHFLPFDPTGKRTALTYIDS---EGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLR 195 (508)
Q Consensus 129 ~~~~~~~~~pf~~~~kr~s~~~~~~---~g~~~~~~kGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr 195 (508)
..++.++.+||+|.+|||++++... ++++++++|||||.|+++|.. +++.++.+.+.+++++++|+|
T Consensus 446 ~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlR 525 (997)
T TIGR01106 446 ERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGER 525 (997)
T ss_pred hhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCE
Confidence 6788999999999999999887642 246789999999999999952 234567788899999999999
Q ss_pred eEEEEeeecCCCCc--------c---CCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh
Q 010523 196 SLAVAYQEVPEGSK--------E---SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 264 (508)
Q Consensus 196 ~l~vA~~~~~~~~~--------~---~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l 264 (508)
|+++||+.+++++. + ..|++|+|+|+++++||||++++++|++|+++||+|+|+|||+..+|.++|+++
T Consensus 526 vla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~ 605 (997)
T TIGR01106 526 VLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV 605 (997)
T ss_pred EEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 99999998864321 1 127899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC----------------------CccccCCchhhhhhcCChhHHhhhcc--eEeecChhhHHHHHHHHhhcCC
Q 010523 265 GMGTNMYP----------------------SSALSGQDRDESIVALPVDELIEKAD--GFAGVFPEHKYEIVKHLQARNH 320 (508)
Q Consensus 265 gi~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--v~a~~~P~~K~~iV~~l~~~g~ 320 (508)
|+..+... ..+++|.+.+. +.+.++++++++.. +|||++|+||.++|+.+|+.|+
T Consensus 606 gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~ 684 (997)
T TIGR01106 606 GIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGA 684 (997)
T ss_pred CCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCC
Confidence 99643210 13455554432 22234556666654 9999999999999999999999
Q ss_pred EEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 321 ICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQ 399 (508)
Q Consensus 321 ~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~ 399 (508)
+|+|+|||+||+|||++|||||||| +|++.|+++||+||++|+|+.|+++|++||++|.|+++++.|.+..++..++..
T Consensus 685 vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~ 764 (997)
T TIGR01106 685 IVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPF 764 (997)
T ss_pred EEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 9999999999999999999999999 699999999999999999999999999999999999999999998776665544
Q ss_pred Hhhcc--ccccHHHHHHH-HHhhcccccccchhHHHHHHHHhhccccc
Q 010523 400 VLELN--FLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHG 444 (508)
Q Consensus 400 ~~~~~--~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~g 444 (508)
+...+ ...|++++|+| ++++++++|.+.++.+++.++.|.|+|+.
T Consensus 765 ~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~ 812 (997)
T TIGR01106 765 LIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRN 812 (997)
T ss_pred HHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcC
Confidence 43322 45799999999 66777788999999999999999999984
No 12
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=7.5e-72 Score=630.70 Aligned_cols=433 Identities=26% Similarity=0.400 Sum_probs=364.4
Q ss_pred cccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEee
Q 010523 4 IQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKN 83 (508)
Q Consensus 4 ~~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~ 83 (508)
+.+.+|.+++..++++++++||||||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.++
T Consensus 266 ~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i 345 (884)
T TIGR01522 266 FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKI 345 (884)
T ss_pred HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEE
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred eeecc-c---C--CC-------------------ChHHHHHHHHHhcccC--------CCChHHHHHHhhhcCc--hhhh
Q 010523 84 LIEIF-A---G--GV-------------------DADTVVLMAARASQVE--------NLDVIDAAIVGMLADP--KEAR 128 (508)
Q Consensus 84 ~i~~~-~---~--~~-------------------~~~~~l~~aa~~~~~~--------~~~~~~~ai~~~~~~~--~~~~ 128 (508)
+.... . . ++ ...+++..++.|+... ..||+|.|++.++... ...+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~ 425 (884)
T TIGR01522 346 WTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLR 425 (884)
T ss_pred EecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHH
Confidence 64210 0 0 00 1134555666665432 1369999999887532 2233
Q ss_pred ccceEEEEecCCCCCceEEEEEEe-cCCeEEEEEcCcHHHHHhhhcC-----------ChhHHHHHHHHHHHHHHccCee
Q 010523 129 ADIQEVHFLPFDPTGKRTALTYID-SEGKMHRVTKGSPEQILNLLHN-----------KSKIGRKVNAVINKFAERGLRS 196 (508)
Q Consensus 129 ~~~~~~~~~pf~~~~kr~s~~~~~-~~g~~~~~~kGa~e~il~~~~~-----------~~~~~~~~~~~~~~~a~~Glr~ 196 (508)
..++.++.+||++.+|||+++++. .+++.+.++||+||.++..|.. +++.++++.+.+++++++|+|+
T Consensus 426 ~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rv 505 (884)
T TIGR01522 426 ETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRV 505 (884)
T ss_pred hhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEE
Confidence 467889999999999999998876 3567889999999999999952 1234567788889999999999
Q ss_pred EEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc
Q 010523 197 LAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 276 (508)
Q Consensus 197 l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~ 276 (508)
+++||+++ +++|+|+|+++++||||++++++|+.|+++|++++|+|||+..+|.++|+++|+.... ..++
T Consensus 506 l~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v 575 (884)
T TIGR01522 506 IAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKT--SQSV 575 (884)
T ss_pred EEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC--Ccee
Confidence 99999974 4579999999999999999999999999999999999999999999999999996532 2345
Q ss_pred cCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhc
Q 010523 277 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAA 355 (508)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aA 355 (508)
+|++.+ .+...++.+.+++..+|||++|+||..+|+.+|+.|+.|+|+|||+||+||+++|||||+|| ++++.++++|
T Consensus 576 ~g~~l~-~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aa 654 (884)
T TIGR01522 576 SGEKLD-AMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAA 654 (884)
T ss_pred EhHHhH-hCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhc
Confidence 555443 23334566778888999999999999999999999999999999999999999999999998 6999999999
Q ss_pred chhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcc-ccccHHHHHHH-HHhhcccccccchhHHH
Q 010523 356 DIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LELN-FLFTLDTVIAI-LQTAFTSKKDFGKEERE 432 (508)
Q Consensus 356 Divl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~-~~~~-~~~pl~~~~~l-~~~~~~~~~~~~~~~~~ 432 (508)
|+++++++|+.|++++++||++|+|+++++.|.+..++..+.+.+ ..++ ...|++++|+| ++++...+|.++++.++
T Consensus 655 Divl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~ 734 (884)
T TIGR01522 655 DMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEP 734 (884)
T ss_pred CEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCC
Confidence 999999999999999999999999999999999987665554432 3333 45799999999 55555578889999999
Q ss_pred HHHHHhhcccccCCC
Q 010523 433 LLWAHAQRTLHGLQP 447 (508)
Q Consensus 433 ~~~~~~~~~p~g~~~ 447 (508)
+.++.|+|+|+....
T Consensus 735 ~~~~~m~~~P~~~~~ 749 (884)
T TIGR01522 735 VDKDVMRKPPRPRND 749 (884)
T ss_pred CChhHhhCCCCCCCC
Confidence 999999999975433
No 13
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=1.7e-71 Score=629.20 Aligned_cols=435 Identities=26% Similarity=0.361 Sum_probs=359.2
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecc--
Q 010523 11 TGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF-- 88 (508)
Q Consensus 11 ~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~-- 88 (508)
..+..++++++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++....
T Consensus 238 ~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~ 317 (917)
T TIGR01116 238 YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSS 317 (917)
T ss_pred HHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcc
Confidence 345567889999999999999999999999999999999999999999999999999999999999999998764210
Q ss_pred ---------cCCCC-------------------hHHHHHHHHHhcccC------------CCChHHHHHHhhhcCch---
Q 010523 89 ---------AGGVD-------------------ADTVVLMAARASQVE------------NLDVIDAAIVGMLADPK--- 125 (508)
Q Consensus 89 ---------~~~~~-------------------~~~~l~~aa~~~~~~------------~~~~~~~ai~~~~~~~~--- 125 (508)
..+++ .+.++..++.|+... ..+|.|.|++.++.+..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~ 397 (917)
T TIGR01116 318 SSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPA 397 (917)
T ss_pred cccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCc
Confidence 00000 123455666666421 24899999998754211
Q ss_pred -----------------hhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhhcC-----------Chh
Q 010523 126 -----------------EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-----------KSK 177 (508)
Q Consensus 126 -----------------~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~il~~~~~-----------~~~ 177 (508)
..+..++.++.+||+|.+|||++++++ +++++.|+|||||.|++.|.. +++
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~ 476 (917)
T TIGR01116 398 TKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDK 476 (917)
T ss_pred hhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHH
Confidence 123457789999999999999999875 467889999999999999963 134
Q ss_pred HHHHHHHHHHHHHH-ccCeeEEEEeeecCCCC----------ccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcE
Q 010523 178 IGRKVNAVINKFAE-RGLRSLAVAYQEVPEGS----------KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGV 246 (508)
Q Consensus 178 ~~~~~~~~~~~~a~-~Glr~l~vA~~~~~~~~----------~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v 246 (508)
..+++.+.+++|++ +|+||+++||+.++++. .+..|++|+|+|+++++||||++++++|+.|+++|+++
T Consensus 477 ~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v 556 (917)
T TIGR01116 477 MKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRV 556 (917)
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEE
Confidence 56678889999999 99999999999986422 13458899999999999999999999999999999999
Q ss_pred EEEcCCcHHHHHHHHHHhCCCCCCCC--CccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEE
Q 010523 247 KMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGM 324 (508)
Q Consensus 247 ~mlTGD~~~~a~~ia~~lgi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~ 324 (508)
+|+|||+..+|.++|+++|+..+... ...+.|.+.+. +...+..+..++..+|||++|+||.++|+.+|+.|+.|+|
T Consensus 557 ~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~-~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~ 635 (917)
T TIGR01116 557 IMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE-MGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAM 635 (917)
T ss_pred EEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh-CCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEE
Confidence 99999999999999999999653211 22345544322 2223345566777899999999999999999999999999
Q ss_pred EcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-c
Q 010523 325 IGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLE-L 403 (508)
Q Consensus 325 vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~-~ 403 (508)
+|||+||+|||+.|||||+|++|++.++++||+++.+++|+.|++++++||++|+|+++++.|.+..++..++..+.. +
T Consensus 636 iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~ 715 (917)
T TIGR01116 636 TGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAA 715 (917)
T ss_pred ecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998766555444332 3
Q ss_pred c-ccccHHHHHHH-HHhhcccccccchhHHHHHHHHhhcccccCCC
Q 010523 404 N-FLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQP 447 (508)
Q Consensus 404 ~-~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~ 447 (508)
+ ...|+++++++ +++++++.|.+.++.+++.++.|.+||+....
T Consensus 716 ~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~ 761 (917)
T TIGR01116 716 LGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDE 761 (917)
T ss_pred HcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCC
Confidence 3 34799999999 66666789999999999999999999975433
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=4e-71 Score=633.87 Aligned_cols=435 Identities=21% Similarity=0.224 Sum_probs=352.2
Q ss_pred cccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeee
Q 010523 6 HREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLI 85 (508)
Q Consensus 6 ~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i 85 (508)
+.+|.+.+.+++.+++++||++||++++++++.|+.+|+|+|++||++.++|.+|++|++|||||||||+|+|+|.+.+.
T Consensus 392 ~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~ 471 (1054)
T TIGR01657 392 GRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQG 471 (1054)
T ss_pred CCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEec
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999998654
Q ss_pred ecccCC----------CChHHHHHHHHHhccc------CCCChHHHHHHhhhcCchhh-------------------hcc
Q 010523 86 EIFAGG----------VDADTVVLMAARASQV------ENLDVIDAAIVGMLADPKEA-------------------RAD 130 (508)
Q Consensus 86 ~~~~~~----------~~~~~~l~~aa~~~~~------~~~~~~~~ai~~~~~~~~~~-------------------~~~ 130 (508)
...... ..........+.|+.. ...||+|.|++.+.+...+. ...
T Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 551 (1054)
T TIGR01657 472 LSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQE 551 (1054)
T ss_pred ccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCce
Confidence 211000 1112234445555432 23589999999976421110 145
Q ss_pred ceEEEEecCCCCCceEEEEEEecC-CeEEEEEcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCC--
Q 010523 131 IQEVHFLPFDPTGKRTALTYIDSE-GKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG-- 207 (508)
Q Consensus 131 ~~~~~~~pf~~~~kr~s~~~~~~~-g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~-- 207 (508)
+++++.+||+|.+|||+++++..+ ++.+.++|||||.|+++|... ..++.+.+.+++|+++|+||+++||+++++.
T Consensus 552 ~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~-~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~ 630 (1054)
T TIGR01657 552 LSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE-TVPSDYQEVLKSYTREGYRVLALAYKELPKLTL 630 (1054)
T ss_pred EEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-CCChhHHHHHHHHHhcCCEEEEEEEeecCccch
Confidence 778999999999999999998743 567899999999999999743 4567888999999999999999999998742
Q ss_pred ------CccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC---------
Q 010523 208 ------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--------- 272 (508)
Q Consensus 208 ------~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~--------- 272 (508)
+++..|++|+|+|+++|+||+|++++++|+.|+++||+|+|+|||++.||.++|+++||..+...
T Consensus 631 ~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~ 710 (1054)
T TIGR01657 631 QKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPP 710 (1054)
T ss_pred hhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccc
Confidence 23557899999999999999999999999999999999999999999999999999999643210
Q ss_pred ------------------------------------------CccccCCchhhh--hhcCChhHHhhhcceEeecChhhH
Q 010523 273 ------------------------------------------SSALSGQDRDES--IVALPVDELIEKADGFAGVFPEHK 308 (508)
Q Consensus 273 ------------------------------------------~~~~~~~~~~~~--~~~~~~~~~~~~~~v~a~~~P~~K 308 (508)
..+++|+..+.. ....++.+++.+..||||++|+||
T Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK 790 (1054)
T TIGR01657 711 ESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQK 790 (1054)
T ss_pred cCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHH
Confidence 011222221111 111235567788899999999999
Q ss_pred HHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 309 YEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRG 388 (508)
Q Consensus 309 ~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~ 388 (508)
.++|+.||+.|+.|+|+|||+||+||||+|||||||+++ | |..+||+++.+++|+.|+++|++||+++.++++.+.|.
T Consensus 791 ~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~ 868 (1054)
T TIGR01657 791 ETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYM 868 (1054)
T ss_pred HHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999865 3 45899999999999999999999999999998888776
Q ss_pred HHHHHHHHHHHHhhccccccHHHHHHH-HHhhcccccccchhHHHHHHHHhhcccc
Q 010523 389 IDGLSSTEFIQVLELNFLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLH 443 (508)
Q Consensus 389 ~~~~~~~i~~~~~~~~~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 443 (508)
+......++..+.......|++.+|++ .+.+...++.+.++.+++..+++.++|.
T Consensus 869 ~~~~~~~~~~~~~l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~ 924 (1054)
T TIGR01657 869 ALYSLIQFYSVSILYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPP 924 (1054)
T ss_pred HHHHHHHHHHHHHHHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCC
Confidence 654433333322222345799999988 4555557778889999999999998884
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.2e-65 Score=590.05 Aligned_cols=437 Identities=19% Similarity=0.247 Sum_probs=346.4
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHH------HHHHhC----CCeecCchHHHHhccccEEEcccccccccCce
Q 010523 9 YRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGS------KRLSLQ----GVITKRMSAIVDMAGMDVLCCDKTGTLTLNKL 78 (508)
Q Consensus 9 ~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~------~~l~~~----gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m 78 (508)
+...+..++.++...+|++||+.++++...++ .+|.++ ++++|+.++.|+||+|++||+|||||||+|+|
T Consensus 296 ~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M 375 (1057)
T TIGR01652 296 GFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIM 375 (1057)
T ss_pred HHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeE
Confidence 33478889999999999999999999999999 888875 49999999999999999999999999999999
Q ss_pred EEEeeeeecccCC-------------C--------------------C----------------hHHHHHHHHHhccc--
Q 010523 79 TVDKNLIEIFAGG-------------V--------------------D----------------ADTVVLMAARASQV-- 107 (508)
Q Consensus 79 ~v~~~~i~~~~~~-------------~--------------------~----------------~~~~l~~aa~~~~~-- 107 (508)
+++++++....++ . + ..+++..++.|+..
T Consensus 376 ~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~ 455 (1057)
T TIGR01652 376 EFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVP 455 (1057)
T ss_pred EEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccc
Confidence 9999876321000 0 0 12345556666542
Q ss_pred -----C-------CCChHHHHHHhhhcCch------------------hhhccceEEEEecCCCCCceEEEEEEecCCeE
Q 010523 108 -----E-------NLDVIDAAIVGMLADPK------------------EARADIQEVHFLPFDPTGKRTALTYIDSEGKM 157 (508)
Q Consensus 108 -----~-------~~~~~~~ai~~~~~~~~------------------~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~ 157 (508)
. ..+|.|.|++.++...+ .....++.++.+||++.+|||++++++.+|++
T Consensus 456 ~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~ 535 (1057)
T TIGR01652 456 EFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRI 535 (1057)
T ss_pred cccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeE
Confidence 1 24799999998754221 01245788999999999999999999888888
Q ss_pred EEEEcCcHHHHHhhhcC-ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc-------------------------cC
Q 010523 158 HRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-------------------------ES 211 (508)
Q Consensus 158 ~~~~kGa~e~il~~~~~-~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~-------------------------~~ 211 (508)
++++||||+.|+++|.. +++..+++.+++++|+.+|+||+++||+.+++++. +.
T Consensus 536 ~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~ 615 (1057)
T TIGR01652 536 KLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAES 615 (1057)
T ss_pred EEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 99999999999999974 34567788999999999999999999999875421 34
Q ss_pred CCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCC------------------
Q 010523 212 SGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS------------------ 273 (508)
Q Consensus 212 ~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~------------------ 273 (508)
.|++|+|+|+++++||||++++++|+.|+++||+|||+|||+.+||.++|++||+..+....
T Consensus 616 iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i 695 (1057)
T TIGR01652 616 IEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAI 695 (1057)
T ss_pred HHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999997543221
Q ss_pred ---------------------ccccCCchhhhhhcC---ChhHHhhhcc--eEeecChhhHHHHHHHHhhc-CCEEEEEc
Q 010523 274 ---------------------SALSGQDRDESIVAL---PVDELIEKAD--GFAGVFPEHKYEIVKHLQAR-NHICGMIG 326 (508)
Q Consensus 274 ---------------------~~~~~~~~~~~~~~~---~~~~~~~~~~--v~a~~~P~~K~~iV~~l~~~-g~~v~~vG 326 (508)
.+++|+..+...... .+.++...+. +|||++|+||.++|+.+|+. |++|+|+|
T Consensus 696 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iG 775 (1057)
T TIGR01652 696 KFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIG 775 (1057)
T ss_pred HHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEe
Confidence 123333332222111 1233444444 99999999999999999998 99999999
Q ss_pred CCCCChhhhhcCCeeEEecC-chHHHHhhcchhccCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-c
Q 010523 327 NGVNDAPALKKADIGIAVAD-ATDAARSAADIVLTEPGLNVIITAV-LISRAIFQRMRNYMVRGIDGLSSTEFIQVLE-L 403 (508)
Q Consensus 327 DG~ND~~al~~AdvGIa~~~-~~~~a~~aADivl~~~~l~~i~~~i-~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~-~ 403 (508)
||+||+|||++|||||++.+ ...+|+.+||+++.+ |+.+.+++ .+||++|+|+++++.|.+.-++..++.++.. +
T Consensus 776 DG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~ 853 (1057)
T TIGR01652 776 DGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSF 853 (1057)
T ss_pred CCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999853 334688999999976 99999998 7899999999999999887554443333222 1
Q ss_pred ----cccccHHHHHHH-HHhhcccccccchh--HHHHHHHHhhcccccCCC
Q 010523 404 ----NFLFTLDTVIAI-LQTAFTSKKDFGKE--ERELLWAHAQRTLHGLQP 447 (508)
Q Consensus 404 ----~~~~pl~~~~~l-~~~~~~~~~~~~~~--~~~~~~~~~~~~p~g~~~ 447 (508)
....|++.++++ +++++++.|.+.++ +++..++.+.++|+.++.
T Consensus 854 ~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~ 904 (1057)
T TIGR01652 854 YNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYRE 904 (1057)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHH
Confidence 122345555555 88999999988664 477778899999985543
No 16
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.6e-64 Score=541.96 Aligned_cols=334 Identities=22% Similarity=0.347 Sum_probs=287.7
Q ss_pred cHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeec
Q 010523 8 EYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEI 87 (508)
Q Consensus 8 ~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~ 87 (508)
++...+..++++++++|||+||..++++++.|+++|+|+|+++|+++++|++|++|+||||||||||+|++.+.+.. .
T Consensus 244 ~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~-~- 321 (673)
T PRK14010 244 NFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFI-P- 321 (673)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEE-e-
Confidence 55667888889999999999999999999999999999999999999999999999999999999999887776532 1
Q ss_pred ccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHH
Q 010523 88 FAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQ 167 (508)
Q Consensus 88 ~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~ 167 (508)
..+.+.++++..++.++..++ ||++.|++.++...... ......+++||++.+|+|++.+ +|+ .+.||+++.
T Consensus 322 -~~~~~~~~ll~~a~~~~~~s~-~P~~~AIv~~a~~~~~~-~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~ 393 (673)
T PRK14010 322 -VKSSSFERLVKAAYESSIADD-TPEGRSIVKLAYKQHID-LPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNS 393 (673)
T ss_pred -CCCccHHHHHHHHHHhcCCCC-ChHHHHHHHHHHHcCCC-chhhhcceeccccccceeEEEE---CCE--EEEECCHHH
Confidence 234556677777777776544 69999999876532111 0111245689999999999864 343 566999999
Q ss_pred HHhhhcCC-hhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcE
Q 010523 168 ILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGV 246 (508)
Q Consensus 168 il~~~~~~-~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v 246 (508)
+++.|... ......+.+..++++++|+|+++++.+ ++++|+++++||+|+|++++|++|+++||++
T Consensus 394 il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~-------------~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~v 460 (673)
T PRK14010 394 MVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLED-------------NEILGVIYLKDVIKDGLVERFRELREMGIET 460 (673)
T ss_pred HHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEEC-------------CEEEEEEEeecCCcHHHHHHHHHHHHCCCeE
Confidence 99999642 123344667778899999999998753 4899999999999999999999999999999
Q ss_pred EEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEc
Q 010523 247 KMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG 326 (508)
Q Consensus 247 ~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vG 326 (508)
+|+||||+.+|.++|+++|+. ++|+|++|+||.++|+.+|++|+.|+|+|
T Consensus 461 vMiTGDn~~TA~aIA~elGI~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtG 510 (673)
T PRK14010 461 VMCTGDNELTAATIAKEAGVD------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTG 510 (673)
T ss_pred EEECCCCHHHHHHHHHHcCCc------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEEC
Confidence 999999999999999999995 37999999999999999999999999999
Q ss_pred CCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 327 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSS 394 (508)
Q Consensus 327 DG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~ 394 (508)
||+||+|||++|||||||++|+|.||++||+|+++++|+.|++++++||++|.|+++++.|.+.++..
T Consensus 511 DGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~ 578 (673)
T PRK14010 511 DGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIA 578 (673)
T ss_pred CChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999875433
No 17
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.3e-63 Score=537.09 Aligned_cols=328 Identities=26% Similarity=0.366 Sum_probs=285.2
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecccC
Q 010523 11 TGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG 90 (508)
Q Consensus 11 ~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~ 90 (508)
.++..++++++++|||+|+.+++++...|+++|+|+|+++|+++++|+||++|+||||||||||+|+|++.+.+. ..
T Consensus 247 ~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~ 323 (679)
T PRK01122 247 LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VP 323 (679)
T ss_pred HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CC
Confidence 388999999999999999999999999999999999999999999999999999999999999999999987542 23
Q ss_pred CCChHHHHHHHHHhcccCCCChHHHHHHhhhcCc-h--hhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHH
Q 010523 91 GVDADTVVLMAARASQVENLDVIDAAIVGMLADP-K--EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQ 167 (508)
Q Consensus 91 ~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~-~--~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~ 167 (508)
+.+.++++..++.++..++| |.+++++.++... + ..+..++..+++||++.++++++.+ +| ..+.||+++.
T Consensus 324 ~~~~~~ll~~a~~~s~~s~h-P~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~ 397 (679)
T PRK01122 324 GVTEEELADAAQLSSLADET-PEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDA 397 (679)
T ss_pred CCCHHHHHHHHHHhcCCCCC-chHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHH
Confidence 56777888888888877665 9999999886531 1 1111244677899999888777643 34 5789999999
Q ss_pred HHhhhcC-ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcE
Q 010523 168 ILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGV 246 (508)
Q Consensus 168 il~~~~~-~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v 246 (508)
+++.|.. ....++++.+..++++++|.|++++|++. +++|+++++||+|+|++++|++|+++||++
T Consensus 398 il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~~~-------------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~v 464 (679)
T PRK01122 398 IRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKT 464 (679)
T ss_pred HHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEECC-------------eEEEEEEEeccCchhHHHHHHHHHHCCCeE
Confidence 9999953 22345677888899999999999999753 899999999999999999999999999999
Q ss_pred EEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEc
Q 010523 247 KMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG 326 (508)
Q Consensus 247 ~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vG 326 (508)
+|+||||+.+|.++|+++|++ +++|+++|+||.++|+.+|++|+.|+|+|
T Consensus 465 vMiTGDn~~TA~aIA~elGId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtG 514 (679)
T PRK01122 465 VMITGDNPLTAAAIAAEAGVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTG 514 (679)
T ss_pred EEECCCCHHHHHHHHHHcCCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 999999999999999999994 37999999999999999999999999999
Q ss_pred CCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 327 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGID 390 (508)
Q Consensus 327 DG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~ 390 (508)
||+||+|||++|||||||++|+|.|+++||+|++++||+.|++++++||++.-.--....|++.
T Consensus 515 DGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~ 578 (679)
T PRK01122 515 DGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA 578 (679)
T ss_pred CCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH
Confidence 9999999999999999999999999999999999999999999999999976322233444443
No 18
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-65 Score=534.29 Aligned_cols=439 Identities=23% Similarity=0.347 Sum_probs=365.6
Q ss_pred cccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeee
Q 010523 6 HREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLI 85 (508)
Q Consensus 6 ~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i 85 (508)
+++|-+++.+++.++++.+|++||..+++.++...++|++++.++|++++.|+||..++||+|||||||+|+|+|...|.
T Consensus 310 gy~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~ 389 (1019)
T KOG0203|consen 310 GYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWF 389 (1019)
T ss_pred cchhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeecc
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred ecccC----------------CCChHHHHHHHHHhccc---------------CCCChHHHHHHhhh----cCchhhhcc
Q 010523 86 EIFAG----------------GVDADTVVLMAARASQV---------------ENLDVIDAAIVGML----ADPKEARAD 130 (508)
Q Consensus 86 ~~~~~----------------~~~~~~~l~~aa~~~~~---------------~~~~~~~~ai~~~~----~~~~~~~~~ 130 (508)
+.... +..-..+.+++..|++. .+.++.+.|+.++. .+..+.|..
T Consensus 390 d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~ 469 (1019)
T KOG0203|consen 390 DNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRER 469 (1019)
T ss_pred CCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHh
Confidence 32110 11123566777777643 24467888988875 344566788
Q ss_pred ceEEEEecCCCCCceEEEEEEecC---CeEEEEEcCcHHHHHhhhc----------CChhHHHHHHHHHHHHHHccCeeE
Q 010523 131 IQEVHFLPFDPTGKRTALTYIDSE---GKMHRVTKGSPEQILNLLH----------NKSKIGRKVNAVINKFAERGLRSL 197 (508)
Q Consensus 131 ~~~~~~~pf~~~~kr~s~~~~~~~---g~~~~~~kGa~e~il~~~~----------~~~~~~~~~~~~~~~~a~~Glr~l 197 (508)
.+.+..+||||++|..-.+....+ .+..+..||+||.++++|+ .++...+.+++...++...|-||+
T Consensus 470 ~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVl 549 (1019)
T KOG0203|consen 470 NPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVL 549 (1019)
T ss_pred hHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHH
Confidence 888999999999999877666533 5677888999999999996 345677888999999999999999
Q ss_pred EEEeeecCCCCc-----------cCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCC
Q 010523 198 AVAYQEVPEGSK-----------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 266 (508)
Q Consensus 198 ~vA~~~~~~~~~-----------~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi 266 (508)
+++++.+++..+ ..+..+|.|+|++++.||||..+++++..|+.+||+|+|+|||++.||+++|+..||
T Consensus 550 gF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgI 629 (1019)
T KOG0203|consen 550 GFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGI 629 (1019)
T ss_pred HHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheee
Confidence 999999886532 234578999999999999999999999999999999999999999999999999997
Q ss_pred CCCCC---C---------C----------ccccCCchhhhhhcCChhHHhhhcc--eEeecChhhHHHHHHHHhhcCCEE
Q 010523 267 GTNMY---P---------S----------SALSGQDRDESIVALPVDELIEKAD--GFAGVFPEHKYEIVKHLQARNHIC 322 (508)
Q Consensus 267 ~~~~~---~---------~----------~~~~~~~~~~~~~~~~~~~~~~~~~--v~a~~~P~~K~~iV~~l~~~g~~v 322 (508)
..... . . .++.|.+.. .+...++++++.... ||||.||+||..||+.+|+.|..|
T Consensus 630 i~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~-~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiV 708 (1019)
T KOG0203|consen 630 ISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELP-DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIV 708 (1019)
T ss_pred ecCCchhhhhhHHhcCCcccccCccccceEEEeccccc-ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEE
Confidence 43211 0 0 112222221 233344566665543 899999999999999999999999
Q ss_pred EEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010523 323 GMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVL 401 (508)
Q Consensus 323 ~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~ 401 (508)
+++|||+||+||||+|||||||| .|+|++|+|||+||+||||++|+..+++||.+|+|+||.+.|.++.++--+.-++.
T Consensus 709 aVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~ 788 (1019)
T KOG0203|consen 709 AVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLL 788 (1019)
T ss_pred EEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHH
Confidence 99999999999999999999999 89999999999999999999999999999999999999999999876655443333
Q ss_pred hcc--ccccHHHHHHH-HHhhcccccccchhHHHHHHHHhhcccccC
Q 010523 402 ELN--FLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGL 445 (508)
Q Consensus 402 ~~~--~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~ 445 (508)
.++ .-+|+..+.+| .......+|.+.+.+|.+..++|+|+|+..
T Consensus 789 fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p 835 (1019)
T KOG0203|consen 789 FILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNP 835 (1019)
T ss_pred HHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCC
Confidence 333 45688888888 666666899999999999999999999853
No 19
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-62 Score=526.47 Aligned_cols=366 Identities=28% Similarity=0.355 Sum_probs=311.8
Q ss_pred ccccc-ccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEE
Q 010523 2 FAIQH-REYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTV 80 (508)
Q Consensus 2 ~~~~~-~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v 80 (508)
|++.. .+|..++.+++++|+++|||||.+++|+++..|+.+++|+||++|+.+++|+++++|+++||||||||+|+|+|
T Consensus 344 w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v 423 (713)
T COG2217 344 WPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEV 423 (713)
T ss_pred HHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEE
Confidence 55555 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEE
Q 010523 81 DKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRV 160 (508)
Q Consensus 81 ~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~ 160 (508)
.++.. .. + ++++++.+++..+..++| |+++||++++.+.. ....+.++.+|-- +-.+ . .+| ..+
T Consensus 424 ~~v~~--~~-~-~e~~~L~laAalE~~S~H-PiA~AIv~~a~~~~--~~~~~~~~~i~G~---Gv~~-~---v~g--~~v 487 (713)
T COG2217 424 TDVVA--LD-G-DEDELLALAAALEQHSEH-PLAKAIVKAAAERG--LPDVEDFEEIPGR---GVEA-E---VDG--ERV 487 (713)
T ss_pred EEEec--CC-C-CHHHHHHHHHHHHhcCCC-hHHHHHHHHHHhcC--CCCccceeeeccC---cEEE-E---ECC--EEE
Confidence 88542 22 3 788999999999998776 99999999765432 1122223344421 1111 1 245 567
Q ss_pred EcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHH
Q 010523 161 TKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240 (508)
Q Consensus 161 ~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~ 240 (508)
..|++..+.+.-. +... .....+.+.++|..++.++.++ +++|++.+.|++|++++++|++|+
T Consensus 488 ~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~R~~a~~aI~~L~ 550 (713)
T COG2217 488 LVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADELRPDAKEAIAALK 550 (713)
T ss_pred EEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCCChhHHHHHHHHH
Confidence 7899998854321 1111 5567788899999999999987 899999999999999999999999
Q ss_pred hCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCC
Q 010523 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNH 320 (508)
Q Consensus 241 ~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~ 320 (508)
+.|++++|+||||..+|.++|+++||+ ++++++.|++|.++|+.||++|+
T Consensus 551 ~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~AellPedK~~~V~~l~~~g~ 600 (713)
T COG2217 551 ALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRAELLPEDKAEIVRELQAEGR 600 (713)
T ss_pred HCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hheccCCcHHHHHHHHHHHhcCC
Confidence 999999999999999999999999994 47999999999999999999999
Q ss_pred EEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 321 ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV 400 (508)
Q Consensus 321 ~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~ 400 (508)
+|+|||||+||+|||..||||||||.|+|.|+++||++|+++++..++.+++.||+++++||+|+.|++.++..++.+.+
T Consensus 601 ~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~ 680 (713)
T COG2217 601 KVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAA 680 (713)
T ss_pred EEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888877
Q ss_pred hhccccccHHHHHHHHHhhcccccccchhHHHHHH
Q 010523 401 LELNFLFTLDTVIAILQTAFTSKKDFGKEERELLW 435 (508)
Q Consensus 401 ~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 435 (508)
+.++ ++..-...|.+++..+..++.|...+
T Consensus 681 ~g~l-----~p~~A~~am~~SSv~VvlNaLRL~~~ 710 (713)
T COG2217 681 GGLL-----TPWIAALAMSGSSVLVVLNALRLLRS 710 (713)
T ss_pred Hhhc-----CHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 6622 23333377788888888877776653
No 20
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=7e-62 Score=555.12 Aligned_cols=440 Identities=18% Similarity=0.198 Sum_probs=338.6
Q ss_pred HHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCC----------CeecCchHHHHhccccEEEcccccccccCceEEEe
Q 010523 13 LNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQG----------VITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDK 82 (508)
Q Consensus 13 i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~g----------ilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~ 82 (508)
+..+++++...||++|++.+.+.....+..+.++. +.+|+.+..|+||+|++||+|||||||+|+|++++
T Consensus 394 f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~ 473 (1178)
T PLN03190 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473 (1178)
T ss_pred HHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEE
Confidence 33345666689999999999999977677787765 78999999999999999999999999999999999
Q ss_pred eeeecccCC-----------------------------------------CC------hHHHHHHHHHhcccC-------
Q 010523 83 NLIEIFAGG-----------------------------------------VD------ADTVVLMAARASQVE------- 108 (508)
Q Consensus 83 ~~i~~~~~~-----------------------------------------~~------~~~~l~~aa~~~~~~------- 108 (508)
|++....++ .+ ..+++...+.|+...
T Consensus 474 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~ 553 (1178)
T PLN03190 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDT 553 (1178)
T ss_pred EEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCC
Confidence 987321000 00 023556667776431
Q ss_pred -----------CCChHHHHHHhhhcCch----------------hhhccceEEEEecCCCCCceEEEEEEecCCeEEEEE
Q 010523 109 -----------NLDVIDAAIVGMLADPK----------------EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVT 161 (508)
Q Consensus 109 -----------~~~~~~~ai~~~~~~~~----------------~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~ 161 (508)
..+|.+.|++.++.+.+ ..+..|+.++.+||+|.+|||++++++.+|+.++++
T Consensus 554 ~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~ 633 (1178)
T PLN03190 554 SDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFV 633 (1178)
T ss_pred CCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEE
Confidence 12688999998765322 235678899999999999999999998888899999
Q ss_pred cCcHHHHHhhhcCC--hhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc-------------------------cCCCC
Q 010523 162 KGSPEQILNLLHNK--SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-------------------------ESSGS 214 (508)
Q Consensus 162 kGa~e~il~~~~~~--~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~-------------------------~~~e~ 214 (508)
||||+.|+++|... .+..+++.+++++|+++|+|||++|||.++++++ +..|+
T Consensus 634 KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~ 713 (1178)
T PLN03190 634 KGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVEN 713 (1178)
T ss_pred ecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhc
Confidence 99999999999742 4567788999999999999999999999975432 24589
Q ss_pred CcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc------------------
Q 010523 215 PWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL------------------ 276 (508)
Q Consensus 215 ~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~------------------ 276 (508)
+|+++|+++++||||++++++|+.|+++||+|||+|||+.++|+++|+.||+.++......+
T Consensus 714 dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~ 793 (1178)
T PLN03190 714 NLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVM 793 (1178)
T ss_pred CcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999996553322111
Q ss_pred -----------------------------cCCchhhhhh---cCChhHHhhhcc--eEeecChhhHHHHHHHHhhc-CCE
Q 010523 277 -----------------------------SGQDRDESIV---ALPVDELIEKAD--GFAGVFPEHKYEIVKHLQAR-NHI 321 (508)
Q Consensus 277 -----------------------------~~~~~~~~~~---~~~~~~~~~~~~--v~a~~~P~~K~~iV~~l~~~-g~~ 321 (508)
+|...+.... ...+.++..++. +|||++|.||+++|+.+|+. +++
T Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~v 873 (1178)
T PLN03190 794 SKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDM 873 (1178)
T ss_pred hhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcE
Confidence 1111111111 012334444444 79999999999999999997 589
Q ss_pred EEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH----H
Q 010523 322 CGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVL-ISRAIFQRMRNYMVRGIDGLSS----T 395 (508)
Q Consensus 322 v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~-~~R~~~~~i~~~~~~~~~~~~~----~ 395 (508)
|+|+|||+||++||++|||||++. ....+|..+||+.+.+ |..+.+++. |||+.|+|+.+.+.|.+.-++. .
T Consensus 874 tlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~q 951 (1178)
T PLN03190 874 TLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVL 951 (1178)
T ss_pred EEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999975 3455788899999966 888988887 9999999999999987742222 2
Q ss_pred HHHHHhhccccccHH--HHHHHHHhhccccccc--chhHHHHHHHHhhcccccCCCCCC-cccc
Q 010523 396 EFIQVLELNFLFTLD--TVIAILQTAFTSKKDF--GKEERELLWAHAQRTLHGLQPPDT-SMFS 454 (508)
Q Consensus 396 i~~~~~~~~~~~pl~--~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~p~g~~~~~~-~~~~ 454 (508)
+|.++...++..++- .+..+++++||+.|++ |..++.-.+....+.|+.++.-+. ..|+
T Consensus 952 f~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n 1015 (1178)
T PLN03190 952 FWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYN 1015 (1178)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccC
Confidence 222222222222222 2223399999999886 578888888888999997765433 3444
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.7e-59 Score=505.82 Aligned_cols=330 Identities=26% Similarity=0.336 Sum_probs=287.5
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeeccc
Q 010523 10 RTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFA 89 (508)
Q Consensus 10 ~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~~ 89 (508)
..++..++++++++|||+++...+.....|+++|+|+|+++|+++++|+||++|+||||||||||+|+|++.+++. .
T Consensus 247 ~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~ 323 (675)
T TIGR01497 247 AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---A 323 (675)
T ss_pred hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---c
Confidence 3468888999999999999888888878899999999999999999999999999999999999999999987642 2
Q ss_pred CCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhh--ccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHH
Q 010523 90 GGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEAR--ADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQ 167 (508)
Q Consensus 90 ~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~--~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~ 167 (508)
.+.+.++++..++.++..++| |++++++.++.+..... ..++..++.||++.++++++.+. +| ..+.||++|.
T Consensus 324 ~~~~~~~ll~~aa~~~~~s~h-P~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~ 398 (675)
T TIGR01497 324 QGVDEKTLADAAQLASLADDT-PEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDA 398 (675)
T ss_pred CCCcHHHHHHHHHHhcCCCCC-cHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHH
Confidence 356778888888888877654 99999998765321111 12345678999998777765443 44 5789999999
Q ss_pred HHhhhcCC-hhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcE
Q 010523 168 ILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGV 246 (508)
Q Consensus 168 il~~~~~~-~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v 246 (508)
+++.|... ...+..+.+.+++++++|.|++++|++. +++|+++++||+||+++++|++|+++|+++
T Consensus 399 i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v 465 (675)
T TIGR01497 399 IKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKT 465 (675)
T ss_pred HHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEE
Confidence 99888532 2344567788899999999999999864 899999999999999999999999999999
Q ss_pred EEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEc
Q 010523 247 KMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG 326 (508)
Q Consensus 247 ~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vG 326 (508)
+|+|||+..+|..+|+++|+. +++++++|++|..+|+.+|++|+.|+|+|
T Consensus 466 ~miTGD~~~ta~~iA~~lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvG 515 (675)
T TIGR01497 466 IMITGDNRLTAAAIAAEAGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTG 515 (675)
T ss_pred EEEcCCCHHHHHHHHHHcCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 999999999999999999994 37999999999999999999999999999
Q ss_pred CCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 327 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGID 390 (508)
Q Consensus 327 DG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~ 390 (508)
||.||+|||+.|||||||+++++.++++||+++++++|+.|++++++||+++-+......|++.
T Consensus 516 DG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~ 579 (675)
T TIGR01497 516 DGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIA 579 (675)
T ss_pred CCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeec
Confidence 9999999999999999999999999999999999999999999999999999887777777764
No 22
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-58 Score=487.71 Aligned_cols=372 Identities=24% Similarity=0.282 Sum_probs=312.8
Q ss_pred ccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeee
Q 010523 7 REYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIE 86 (508)
Q Consensus 7 ~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~ 86 (508)
.+++.++..++++|+++|||||+++.|++...|....+++|+|+|..+++|.+.++++++||||||||+|+++|.+..+
T Consensus 527 ~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~- 605 (951)
T KOG0207|consen 527 DAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKS- 605 (951)
T ss_pred HHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEe-
Confidence 6789999999999999999999999999999999999999999999999999999999999999999999999988543
Q ss_pred cccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhh--ccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCc
Q 010523 87 IFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEAR--ADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGS 164 (508)
Q Consensus 87 ~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~--~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa 164 (508)
+.+..+..+++.+++..+..+.| |+.+|++.|+.+..... ........+|-.. ....+. .+|+ .++.|+
T Consensus 606 -~~~~~~~~e~l~~v~a~Es~SeH-Pig~AIv~yak~~~~~~~~~~~~~~~~~pg~g--~~~~~~---~~~~--~i~iGN 676 (951)
T KOG0207|consen 606 -LSNPISLKEALALVAAMESGSEH-PIGKAIVDYAKEKLVEPNPEGVLSFEYFPGEG--IYVTVT---VDGN--EVLIGN 676 (951)
T ss_pred -cCCcccHHHHHHHHHHHhcCCcC-chHHHHHHHHHhcccccCccccceeecccCCC--cccceE---Eeee--EEeech
Confidence 33336778888887777777565 99999999987554211 1222233333322 221111 2332 277899
Q ss_pred HHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCC
Q 010523 165 PEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL 244 (508)
Q Consensus 165 ~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi 244 (508)
.+++...- ....+.++..+++-...|..+.++++.+ +++|++.++|++|+|+..+|+.|+++|+
T Consensus 677 ~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l~gv~~l~D~vr~~a~~av~~Lk~~Gi 740 (951)
T KOG0207|consen 677 KEWMSRNG---CSIPDDILDALTESERKGQTVVYVAVNG-------------QLVGVFALEDQVRPDAALAVAELKSMGI 740 (951)
T ss_pred HHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEEECC-------------EEEEEEEeccccchhHHHHHHHHHhcCc
Confidence 99886532 2344557788888899999999999988 9999999999999999999999999999
Q ss_pred cEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEE
Q 010523 245 GVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGM 324 (508)
Q Consensus 245 ~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~ 324 (508)
+++|+||||..+|.++|+++|+. +++|++.|+||.++|+.+|+.++.|+|
T Consensus 741 ~v~mLTGDn~~aA~svA~~VGi~------------------------------~V~aev~P~~K~~~Ik~lq~~~~~VaM 790 (951)
T KOG0207|consen 741 KVVMLTGDNDAAARSVAQQVGID------------------------------NVYAEVLPEQKAEKIKEIQKNGGPVAM 790 (951)
T ss_pred eEEEEcCCCHHHHHHHHHhhCcc------------------------------eEEeccCchhhHHHHHHHHhcCCcEEE
Confidence 99999999999999999999974 489999999999999999999999999
Q ss_pred EcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010523 325 IGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN 404 (508)
Q Consensus 325 vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~~~ 404 (508)
+|||+||+|||..|||||+|+.+++.|.++|||||+.+++..++.+|..||+++.|+|.|+.|++.++...+.+.++.|+
T Consensus 791 VGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~ 870 (951)
T KOG0207|consen 791 VGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFA 870 (951)
T ss_pred EeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888887765
Q ss_pred cc-ccHHHHHHHHHhhcccccccchhHHHHH
Q 010523 405 FL-FTLDTVIAILQTAFTSKKDFGKEERELL 434 (508)
Q Consensus 405 ~~-~pl~~~~~l~~~~~~~~~~~~~~~~~~~ 434 (508)
.+ +-|.+..--..|++++.+++-...-.+.
T Consensus 871 P~~~~L~Pw~A~lama~SSvsVv~sSllLk~ 901 (951)
T KOG0207|consen 871 PFGIVLPPWMASLAMAASSVSVVLSSLLLKR 901 (951)
T ss_pred CCccccCchHHHHHHHhhhHHHhhhHHHHhh
Confidence 33 2233333337888898888754444443
No 23
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=6.3e-55 Score=483.26 Aligned_cols=358 Identities=26% Similarity=0.320 Sum_probs=295.1
Q ss_pred cccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEee
Q 010523 4 IQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKN 83 (508)
Q Consensus 4 ~~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~ 83 (508)
+++.+|..++.+++++|+++|||||+++.|+++..++.+++|+||++|+++++|+|+++|+||||||||||+|+|+|.+.
T Consensus 378 ~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~ 457 (741)
T PRK11033 378 LFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDI 457 (741)
T ss_pred HccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEE
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred eeecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEE-EE-ecCCeEEEEE
Q 010523 84 LIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALT-YI-DSEGKMHRVT 161 (508)
Q Consensus 84 ~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~-~~-~~~g~~~~~~ 161 (508)
+. ..+.+.++++.+++..+..++ ||+++|++.++.+.. + .+||.+..+.+.-. ++ ..+|+ .+.
T Consensus 458 ~~---~~~~~~~~~l~~aa~~e~~s~-hPia~Ai~~~a~~~~-----~----~~~~~~~~~~~~g~Gv~~~~~g~--~~~ 522 (741)
T PRK11033 458 HP---ATGISESELLALAAAVEQGST-HPLAQAIVREAQVRG-----L----AIPEAESQRALAGSGIEGQVNGE--RVL 522 (741)
T ss_pred Ee---cCCCCHHHHHHHHHHHhcCCC-CHHHHHHHHHHHhcC-----C----CCCCCcceEEEeeEEEEEEECCE--EEE
Confidence 42 234677888888877776644 599999998764321 1 14565555544321 21 13554 345
Q ss_pred cCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHh
Q 010523 162 KGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 241 (508)
Q Consensus 162 kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~ 241 (508)
.|+++.+.+ ..+.+...++++..+|.|+++|+++. +++|+++++|++|+|++++|++|++
T Consensus 523 ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~~r~~a~~~i~~L~~ 582 (741)
T PRK11033 523 ICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDTLRADARQAISELKA 582 (741)
T ss_pred Eecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecCCchhHHHHHHHHHH
Confidence 689988754 12344556778899999999999865 8999999999999999999999999
Q ss_pred CCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCE
Q 010523 242 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHI 321 (508)
Q Consensus 242 ~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~ 321 (508)
.|++++|+|||+..+|..+|+++||. .++++.|++|..+|+.+|+. +.
T Consensus 583 ~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K~~~v~~l~~~-~~ 630 (741)
T PRK11033 583 LGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPEDKVKAVTELNQH-AP 630 (741)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHHHHHHHHHHhcC-CC
Confidence 99999999999999999999999993 46789999999999999965 58
Q ss_pred EEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010523 322 CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVL 401 (508)
Q Consensus 322 v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~ 401 (508)
|+|+|||+||+|||+.|||||+|+++++.++++||+++.++++..++.++++||++++||++|+.|++..+...+.+.+.
T Consensus 631 v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~ 710 (741)
T PRK11033 631 LAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLL 710 (741)
T ss_pred EEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887776666543
Q ss_pred hccccccHHHHHHHHHhhcccccccchhHHHH
Q 010523 402 ELNFLFTLDTVIAILQTAFTSKKDFGKEEREL 433 (508)
Q Consensus 402 ~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~ 433 (508)
. ++|+ +.-.+.+..++..+..++.|..
T Consensus 711 g---~~~~--~~a~~~~~~ss~~v~~Nslrl~ 737 (741)
T PRK11033 711 G---ITGL--WLAVLADSGATALVTANALRLL 737 (741)
T ss_pred h---hhHH--HHHHHHHcChHHHHHHHHHhhc
Confidence 2 2221 1112455556666666665544
No 24
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-56 Score=472.42 Aligned_cols=390 Identities=24% Similarity=0.332 Sum_probs=307.6
Q ss_pred ccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeee
Q 010523 5 QHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNL 84 (508)
Q Consensus 5 ~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~ 84 (508)
.+.+....+.++|.++.+.+|+|||.+++++..++.+||.|+||+|-+++.+-..|+++++|||||||||++.+.+....
T Consensus 411 ~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~ 490 (1140)
T KOG0208|consen 411 LGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVV 490 (1140)
T ss_pred cCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEE
Confidence 46778888999999999999999999999999999999999999999999999999999999999999999999886533
Q ss_pred eecccC---C----------------------CCh-HHHHHHHHHhccc------CCCChHHHHHHhhhc----------
Q 010523 85 IEIFAG---G----------------------VDA-DTVVLMAARASQV------ENLDVIDAAIVGMLA---------- 122 (508)
Q Consensus 85 i~~~~~---~----------------------~~~-~~~l~~aa~~~~~------~~~~~~~~ai~~~~~---------- 122 (508)
. .... + ..+ -.+....+.|+.. -..||+|..+.+..+
T Consensus 491 ~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~ 569 (1140)
T KOG0208|consen 491 P-VERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIED 569 (1140)
T ss_pred e-ccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccc
Confidence 2 1100 0 001 0122223333321 123566654443211
Q ss_pred --------------Cchh-----h---h-ccceEEEEecCCCCCceEEEEEEec-CCeEEEEEcCcHHHHHhhhcCChhH
Q 010523 123 --------------DPKE-----A---R-ADIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKSKI 178 (508)
Q Consensus 123 --------------~~~~-----~---~-~~~~~~~~~pf~~~~kr~s~~~~~~-~g~~~~~~kGa~e~il~~~~~~~~~ 178 (508)
+|.. . . ..+..++.+||+|.-+||||++.++ +.+++.|+|||||.|.+.|.. +.+
T Consensus 570 ~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p-~tv 648 (1140)
T KOG0208|consen 570 EATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP-ETV 648 (1140)
T ss_pred hhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc-ccC
Confidence 0100 0 0 1467889999999999999999874 568899999999999999964 467
Q ss_pred HHHHHHHHHHHHHccCeeEEEEeeecCCC--------CccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEc
Q 010523 179 GRKVNAVINKFAERGLRSLAVAYQEVPEG--------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMIT 250 (508)
Q Consensus 179 ~~~~~~~~~~~a~~Glr~l~vA~~~~~~~--------~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlT 250 (508)
+..+.+.++.|+.+|+|++++|+|.++.. .++..|++++|+|++.|++++|++++.+|++|.++.|+++|+|
T Consensus 649 P~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcT 728 (1140)
T KOG0208|consen 649 PADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCT 728 (1140)
T ss_pred CccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEc
Confidence 88899999999999999999999999866 3678899999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhCCCCCCCC---------------Cccc--------------------------------------c
Q 010523 251 GDQLAIAKETGRRLGMGTNMYP---------------SSAL--------------------------------------S 277 (508)
Q Consensus 251 GD~~~~a~~ia~~lgi~~~~~~---------------~~~~--------------------------------------~ 277 (508)
|||..||..+|++|||...... ...+ +
T Consensus 729 GDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~s 808 (1140)
T KOG0208|consen 729 GDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMS 808 (1140)
T ss_pred CCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEec
Confidence 9999999999999999542100 0000 0
Q ss_pred CCchhhhh--hcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhc
Q 010523 278 GQDRDESI--VALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAA 355 (508)
Q Consensus 278 ~~~~~~~~--~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aA 355 (508)
|+..+-.. ....++.+..+..+||||+|+||.++|+.||+.|+.|+|+|||+||+.|||+|||||+++++. |.-||
T Consensus 809 G~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaE--ASvAA 886 (1140)
T KOG0208|consen 809 GKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAE--ASVAA 886 (1140)
T ss_pred CchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhh--HhhcC
Confidence 00000000 001134567788899999999999999999999999999999999999999999999998653 67789
Q ss_pred chhccCCChhHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Q 010523 356 DIVLTEPGLNVIITAVLISRA----IFQRMRNYMVRGIDGLSSTEFI 398 (508)
Q Consensus 356 Divl~~~~l~~i~~~i~~~R~----~~~~i~~~~~~~~~~~~~~i~~ 398 (508)
.+.-.-++.+.+++.|++||+ .|..+|-...|+++.+...+++
T Consensus 887 pFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~L 933 (1140)
T KOG0208|consen 887 PFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFL 933 (1140)
T ss_pred ccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhee
Confidence 999888899999999999998 4666666677877665555443
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=5.7e-54 Score=459.70 Aligned_cols=308 Identities=34% Similarity=0.533 Sum_probs=275.0
Q ss_pred cHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeec
Q 010523 8 EYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEI 87 (508)
Q Consensus 8 ~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~ 87 (508)
+|..++.+++++++++|||+||+++++++..+..+|+++|+++|+++++|+||++|++|||||||||+|+|+|.++++.
T Consensus 176 ~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~- 254 (499)
T TIGR01494 176 SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVL- 254 (499)
T ss_pred cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEec-
Confidence 4889999999999999999999999999999999999999999999999999999999999999999999999987531
Q ss_pred ccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHH
Q 010523 88 FAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQ 167 (508)
Q Consensus 88 ~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~ 167 (508)
. . +. ...||++.+++.++... .++..||++..+++++++...++ .++||+++.
T Consensus 255 -~-~-------------~~-~s~hp~~~ai~~~~~~~--------~~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~ 307 (499)
T TIGR01494 255 -G-G-------------EY-LSGHPDERALVKSAKWK--------ILNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEF 307 (499)
T ss_pred -C-C-------------Cc-CCCChHHHHHHHHhhhc--------CcceeccCCCCceEEEEEecCCc---EEEeCCHHH
Confidence 1 0 12 24469999999877531 23567999999999988875333 478999999
Q ss_pred HHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEE
Q 010523 168 ILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVK 247 (508)
Q Consensus 168 il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~ 247 (508)
+.+.|.. +.+..+++..+|+|++++|++. +++|++.++|++|++++++|+.|+++|++++
T Consensus 308 i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~ 367 (499)
T TIGR01494 308 VLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDAKETISELREAGIRVI 367 (499)
T ss_pred HHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEE
Confidence 9988742 2334556888999999999986 8999999999999999999999999999999
Q ss_pred EEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcC
Q 010523 248 MITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGN 327 (508)
Q Consensus 248 mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGD 327 (508)
|+|||+..+|..+|+++|+ +++++|++|.++|+.+|+.|+.|+|+||
T Consensus 368 ~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGD 414 (499)
T TIGR01494 368 MLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALVEALQKKGRVVAMTGD 414 (499)
T ss_pred EEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHHHHHHHCCCEEEEECC
Confidence 9999999999999999987 6889999999999999999999999999
Q ss_pred CCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010523 328 GVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVL 401 (508)
Q Consensus 328 G~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~ 401 (508)
|.||+||++.|||||+|+ ++++||++++++++..+..++.+||++++++++++.|++..+...+.+.+.
T Consensus 415 g~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 415 GVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred ChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 688999999999999999999999999999999999999887776666654
No 26
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.5e-56 Score=496.33 Aligned_cols=443 Identities=19% Similarity=0.192 Sum_probs=339.2
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHH----------hCCCeecCchHHHHhccccEEEcccccccccCceE
Q 010523 10 RTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLS----------LQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLT 79 (508)
Q Consensus 10 ~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~----------~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~ 79 (508)
...+..++.++...+|++|.+.+.+.-...+.... ...+.+|..+.-|+||+|++|++|||||||+|.|+
T Consensus 325 ~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~ 404 (1151)
T KOG0206|consen 325 FVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSME 404 (1151)
T ss_pred HHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceee
Confidence 44567778888889999998777766555543322 23578999999999999999999999999999999
Q ss_pred EEeeeeecccCCCC--------------------------------------------hHHHHHHHHHhcccC-------
Q 010523 80 VDKNLIEIFAGGVD--------------------------------------------ADTVVLMAARASQVE------- 108 (508)
Q Consensus 80 v~~~~i~~~~~~~~--------------------------------------------~~~~l~~aa~~~~~~------- 108 (508)
+.+|.|....++.. ..+.....+.|+...
T Consensus 405 F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~ 484 (1151)
T KOG0206|consen 405 FKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDS 484 (1151)
T ss_pred eecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCc
Confidence 99998754322111 113444555554321
Q ss_pred ------CCChHHHHHHhhhcCchh----------------hhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHH
Q 010523 109 ------NLDVIDAAIVGMLADPKE----------------ARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPE 166 (508)
Q Consensus 109 ------~~~~~~~ai~~~~~~~~~----------------~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e 166 (508)
..+|.+.|++..+.+..- ....|+.++.++|+|.||||||++++++|+..++||||+.
T Consensus 485 ~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADs 564 (1151)
T KOG0206|consen 485 GKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADS 564 (1151)
T ss_pred cceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcch
Confidence 135667777765432211 1357899999999999999999999999999999999999
Q ss_pred HHHhhhc-CChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc-------------------------cCCCCCcEEEE
Q 010523 167 QILNLLH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-------------------------ESSGSPWQFIG 220 (508)
Q Consensus 167 ~il~~~~-~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~-------------------------~~~e~~l~~lG 220 (508)
+|.+++. +.....++..+++++|+.+|+|+||+||++++++++ +.+|+||+++|
T Consensus 565 vI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 565 VIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred hhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 9999998 556788889999999999999999999999987653 34589999999
Q ss_pred EeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCc--------------------
Q 010523 221 LIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD-------------------- 280 (508)
Q Consensus 221 ~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~-------------------- 280 (508)
.+++||+++++++++|+.|++||||+||+|||+.+||+++|..|++..+.+....+...+
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~ 724 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRK 724 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999976644333332211
Q ss_pred -------------------------hhhhhhcCC---h--hHHhhhcceEeecChhhHHHHHHHHhhc-CCEEEEEcCCC
Q 010523 281 -------------------------RDESIVALP---V--DELIEKADGFAGVFPEHKYEIVKHLQAR-NHICGMIGNGV 329 (508)
Q Consensus 281 -------------------------~~~~~~~~~---~--~~~~~~~~v~a~~~P~~K~~iV~~l~~~-g~~v~~vGDG~ 329 (508)
....+.... + ...-+++.+|||++|.||+.+|+..++. +..+++||||+
T Consensus 725 ~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGA 804 (1151)
T KOG0206|consen 725 FTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGA 804 (1151)
T ss_pred hhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCC
Confidence 111111100 1 1234567799999999999999999754 88999999999
Q ss_pred CChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH----HHHhhc
Q 010523 330 NDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVL-ISRAIFQRMRNYMVRGIDGLSSTEF----IQVLEL 403 (508)
Q Consensus 330 ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~-~~R~~~~~i~~~~~~~~~~~~~~i~----~~~~~~ 403 (508)
||++|++.|||||+++ ....+|..+||+.+.+ |.-+-+++. |||+.|.|+.++++|.+.-+....+ .++...
T Consensus 805 NDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~g 882 (1151)
T KOG0206|consen 805 NDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNG 882 (1151)
T ss_pred ccchheeeCCcCeeeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 9999999999999997 5677788999999987 666666554 8999999999999998864333222 222222
Q ss_pred cccccHHHHHHH--HHhhccccccc--chhHHHHHHHHhhcccccCCCCCC-cccc
Q 010523 404 NFLFTLDTVIAI--LQTAFTSKKDF--GKEERELLWAHAQRTLHGLQPPDT-SMFS 454 (508)
Q Consensus 404 ~~~~pl~~~~~l--~~~~~~~~~~~--~~~~~~~~~~~~~~~p~g~~~~~~-~~~~ 454 (508)
+..-|+---..+ ++++|+++|++ |..++..+.....+.|..++.-+. .+|+
T Consensus 883 fSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~ 938 (1151)
T KOG0206|consen 883 FSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFN 938 (1151)
T ss_pred CCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccc
Confidence 222222222222 89999998886 678888888999999998877654 4454
No 27
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=2.2e-51 Score=462.93 Aligned_cols=363 Identities=27% Similarity=0.314 Sum_probs=304.0
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecc
Q 010523 9 YRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF 88 (508)
Q Consensus 9 ~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~ 88 (508)
|..++..++++|+++|||||++++|+++..++.+++|+|+++|+++++|+++++|++|||||||||+|+|+|.+...
T Consensus 464 ~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~--- 540 (834)
T PRK10671 464 IVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKT--- 540 (834)
T ss_pred HHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEc---
Confidence 67789999999999999999999999999999999999999999999999999999999999999999999987532
Q ss_pred cCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHHH
Q 010523 89 AGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQI 168 (508)
Q Consensus 89 ~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~i 168 (508)
..+.+.++++.+++..++.++| |+++|+++++.+.. .......+.+| ++ .+... .+| ..+.+|+++.+
T Consensus 541 ~~~~~~~~~l~~a~~~e~~s~h-p~a~Ai~~~~~~~~--~~~~~~~~~~~-----g~-Gv~~~-~~g--~~~~~G~~~~~ 608 (834)
T PRK10671 541 FNGVDEAQALRLAAALEQGSSH-PLARAILDKAGDMT--LPQVNGFRTLR-----GL-GVSGE-AEG--HALLLGNQALL 608 (834)
T ss_pred cCCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHhhCC--CCCcccceEec-----ce-EEEEE-ECC--EEEEEeCHHHH
Confidence 2345677888888888777665 99999998764211 01111122222 11 11111 245 35667999987
Q ss_pred HhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEE
Q 010523 169 LNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKM 248 (508)
Q Consensus 169 l~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~m 248 (508)
.+... ..+.+...++++.++|.++++++++. .++|++.+.|++||+++++|++|++.|++++|
T Consensus 609 ~~~~~----~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~ 671 (834)
T PRK10671 609 NEQQV----DTKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPLRSDSVAALQRLHKAGYRLVM 671 (834)
T ss_pred HHcCC----ChHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcchhhHHHHHHHHHHCCCeEEE
Confidence 54221 12345666778889999999999876 89999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCC
Q 010523 249 ITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNG 328 (508)
Q Consensus 249 lTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG 328 (508)
+|||+..++..+++++|+. .+++++.|++|.++++.++.+++.|+|+|||
T Consensus 672 ~Tgd~~~~a~~ia~~lgi~------------------------------~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg 721 (834)
T PRK10671 672 LTGDNPTTANAIAKEAGID------------------------------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDG 721 (834)
T ss_pred EcCCCHHHHHHHHHHcCCC------------------------------EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCC
Confidence 9999999999999999995 3689999999999999999999999999999
Q ss_pred CCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--
Q 010523 329 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFL-- 406 (508)
Q Consensus 329 ~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~-- 406 (508)
.||++|++.||+||+||++++.++++||++++++++..|..++++||+++.+|++|+.|++.++..++.+.++.+...
T Consensus 722 ~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g 801 (834)
T PRK10671 722 INDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTG 801 (834)
T ss_pred HHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999988887554321
Q ss_pred ccHHHHHHHHHhhcccccccchhHHHH
Q 010523 407 FTLDTVIAILQTAFTSKKDFGKEEREL 433 (508)
Q Consensus 407 ~pl~~~~~l~~~~~~~~~~~~~~~~~~ 433 (508)
+.++|+.-...|.+++..++.++.|..
T Consensus 802 ~~l~p~~a~~~m~~ss~~vv~nslrl~ 828 (834)
T PRK10671 802 TLLNPVVAGAAMALSSITVVSNANRLL 828 (834)
T ss_pred cccCHHHHHHHhcccceeehhhhHHhc
Confidence 235666556889999999998887654
No 28
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-53 Score=434.38 Aligned_cols=430 Identities=21% Similarity=0.243 Sum_probs=328.8
Q ss_pred ccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhC----CCeecCchHHHHhccccEEEcccccccccCceEE
Q 010523 5 QHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQ----GVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTV 80 (508)
Q Consensus 5 ~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~----gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v 80 (508)
++.+|-..+.+++.+....||++|-+-+.++...-.+....+ |.++|+.+.-|+||.|.++.+|||||||+|.|.+
T Consensus 346 ~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~ 425 (1051)
T KOG0210|consen 346 FGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEF 425 (1051)
T ss_pred CCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchhee
Confidence 578899999999999999999999999999998888888765 6789999999999999999999999999999999
Q ss_pred EeeeeecccCCCCh----------------------------------HHHHHHHHHhcccCC------------CChHH
Q 010523 81 DKNLIEIFAGGVDA----------------------------------DTVVLMAARASQVEN------------LDVID 114 (508)
Q Consensus 81 ~~~~i~~~~~~~~~----------------------------------~~~l~~aa~~~~~~~------------~~~~~ 114 (508)
+|+++...+.+.+. .+.....+.|++..+ .+|.+
T Consensus 426 KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDE 505 (1051)
T KOG0210|consen 426 KKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDE 505 (1051)
T ss_pred eeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCe
Confidence 99876433221110 122333444443311 02233
Q ss_pred HHHHhhhc-----------------CchhhhccceEEEEecCCCCCceEEEEEEec-CCeEEEEEcCcHHHHHhhhcCCh
Q 010523 115 AAIVGMLA-----------------DPKEARADIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKS 176 (508)
Q Consensus 115 ~ai~~~~~-----------------~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~-~g~~~~~~kGa~e~il~~~~~~~ 176 (508)
-|++++-. .+......|++++.|||++..|||++++++. .|+...|.|||+.+|-....
T Consensus 506 VAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq--- 582 (1051)
T KOG0210|consen 506 VAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ--- 582 (1051)
T ss_pred EEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc---
Confidence 33333211 1111124789999999999999999999985 68889999999999977663
Q ss_pred hHHHHHHHHHHHHHHccCeeEEEEeeecCCCCcc--------------------------CCCCCcEEEEEeccCCCCCc
Q 010523 177 KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKE--------------------------SSGSPWQFIGLIPLFDPPIH 230 (508)
Q Consensus 177 ~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~--------------------------~~e~~l~~lG~i~l~D~~r~ 230 (508)
..+++++.-..+|++|+|+|.+|.+.+++++++ ..|.+++++|+.+.||++++
T Consensus 583 -~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~ 661 (1051)
T KOG0210|consen 583 -YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQD 661 (1051)
T ss_pred -cchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhh
Confidence 445677788899999999999999999876532 34789999999999999999
Q ss_pred chHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC--------------------------CccccCCchhhh
Q 010523 231 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--------------------------SSALSGQDRDES 284 (508)
Q Consensus 231 ~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~--------------------------~~~~~~~~~~~~ 284 (508)
+++.+++.||++||+|||+|||+.+||..+|+..++.+.... ..++.|+...-.
T Consensus 662 dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~c 741 (1051)
T KOG0210|consen 662 DVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFC 741 (1051)
T ss_pred hhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHH
Confidence 999999999999999999999999999999999998653221 223344433322
Q ss_pred hh--cCChhHHhh--hcceEeecChhhHHHHHHHHhhc-CCEEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchh
Q 010523 285 IV--ALPVDELIE--KADGFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIV 358 (508)
Q Consensus 285 ~~--~~~~~~~~~--~~~v~a~~~P~~K~~iV~~l~~~-g~~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADiv 358 (508)
+. +.++-++.+ .+.++||++|+||+++++.+|++ |..|+++|||.||+.|+++||+||++. ....+|.-|||+.
T Consensus 742 l~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfS 821 (1051)
T KOG0210|consen 742 LKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFS 821 (1051)
T ss_pred HHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhcccc
Confidence 21 222334443 35689999999999999999986 889999999999999999999999985 6778899999999
Q ss_pred ccCCChhHHHHHHH-HHHHHHHHHHHHHHHHH-----HHHHHHHHHHHhhccccccHHHHHHH----HHhhcccccccch
Q 010523 359 LTEPGLNVIITAVL-ISRAIFQRMRNYMVRGI-----DGLSSTEFIQVLELNFLFTLDTVIAI----LQTAFTSKKDFGK 428 (508)
Q Consensus 359 l~~~~l~~i~~~i~-~~R~~~~~i~~~~~~~~-----~~~~~~i~~~~~~~~~~~pl~~~~~l----~~~~~~~~~~~~~ 428 (508)
+++ |+.+.+++. +||..|+|-.+...|.+ +....++|.. ++.|.|....|-. +.+.-++.|+|.+
T Consensus 822 Itq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~---v~yF~~V~LyqG~LmvgysT~YTmlPVFSl 896 (1051)
T KOG0210|consen 822 ITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSS---VFYFAPVALYQGFLMVGYSTCYTMLPVFSL 896 (1051)
T ss_pred HHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHH---HhhhcchHHhhhhHHHHHHHHHHHhhhhee
Confidence 988 999998776 79999999886655544 3455555443 3446677777664 6667778888875
Q ss_pred -hHHHHHHHHhhcccc
Q 010523 429 -EERELLWAHAQRTLH 443 (508)
Q Consensus 429 -~~~~~~~~~~~~~p~ 443 (508)
-++.-........|.
T Consensus 897 v~d~Dv~~~~a~~yPE 912 (1051)
T KOG0210|consen 897 VLDRDVSESLAVLYPE 912 (1051)
T ss_pred eecccccHHHHhhhHH
Confidence 334444444444554
No 29
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=4.1e-50 Score=433.39 Aligned_cols=328 Identities=29% Similarity=0.380 Sum_probs=276.4
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecc
Q 010523 9 YRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF 88 (508)
Q Consensus 9 ~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~ 88 (508)
|..++.+++++|+++|||||++++|+++..++.+++|+||++|+++++|+|+++|+||||||||||+|+|+|.+... .
T Consensus 224 ~~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~--~ 301 (562)
T TIGR01511 224 WLFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHV--F 301 (562)
T ss_pred HHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEec--C
Confidence 44689999999999999999999999999999999999999999999999999999999999999999999988532 2
Q ss_pred cCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHHH
Q 010523 89 AGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQI 168 (508)
Q Consensus 89 ~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~i 168 (508)
.+.+.++++.+++.+++.++| |+++|++.++..........+..+.+|. +..... .+| ..+..|+++.+
T Consensus 302 -~~~~~~~~l~~aa~~e~~s~H-Pia~Ai~~~~~~~~~~~~~~~~~~~~~g----~Gi~~~---~~g--~~~~iG~~~~~ 370 (562)
T TIGR01511 302 -GDRDRTELLALAAALEAGSEH-PLAKAIVSYAKEKGITLVEVSDFKAIPG----IGVEGT---VEG--TKIQLGNEKLL 370 (562)
T ss_pred -CCCCHHHHHHHHHHHhccCCC-hHHHHHHHHHHhcCCCcCCCCCeEEECC----ceEEEE---ECC--EEEEEECHHHH
Confidence 345677888888888777665 9999999887532211111222233321 112221 244 45678999987
Q ss_pred HhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEE
Q 010523 169 LNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKM 248 (508)
Q Consensus 169 l~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~m 248 (508)
.+... . +.++.++|.+++.++.+. +++|++.++|++||+++++|++|++.|++++|
T Consensus 371 ~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~i 426 (562)
T TIGR01511 371 GENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQLRPEAKEVIQALKRRGIEPVM 426 (562)
T ss_pred HhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccccHHHHHHHHHHHHcCCeEEE
Confidence 43211 1 112457899999998765 89999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCC
Q 010523 249 ITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNG 328 (508)
Q Consensus 249 lTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG 328 (508)
+|||+..++..+++++|+. +|+++.|++|.++++.++.+++.|+|+|||
T Consensus 427 lSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg 475 (562)
T TIGR01511 427 LTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDG 475 (562)
T ss_pred EcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCC
Confidence 9999999999999999982 578889999999999999999999999999
Q ss_pred CCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010523 329 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN 404 (508)
Q Consensus 329 ~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~~~ 404 (508)
.||++|++.||+||+|+.+++.++++||+++.++++..+..++++||+++++|++|+.|++..+..++.+.++.+.
T Consensus 476 ~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~~ 551 (562)
T TIGR01511 476 INDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLY 551 (562)
T ss_pred CccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999998999999999999999999999999999999999999999999988888877765543
No 30
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1e-49 Score=431.23 Aligned_cols=333 Identities=28% Similarity=0.368 Sum_probs=277.6
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecccC
Q 010523 11 TGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG 90 (508)
Q Consensus 11 ~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~ 90 (508)
.++.+++++++++|||+||+++|++++.++++|+++|+++|+++++|+++++|++|||||||||+|+|+|.+... . .
T Consensus 195 ~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--~-~ 271 (556)
T TIGR01525 195 GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP--L-D 271 (556)
T ss_pred hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe--c-C
Confidence 789999999999999999999999999999999999999999999999999999999999999999999988543 1 2
Q ss_pred CCC--hHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccce-EEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHH
Q 010523 91 GVD--ADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ-EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQ 167 (508)
Q Consensus 91 ~~~--~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~-~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~ 167 (508)
+.+ .++++.+++.++...+ ||++.|++.++......... . ....+| .+..... .+|. ..+..|+++.
T Consensus 272 ~~~~~~~~~l~~a~~~e~~~~-hp~~~Ai~~~~~~~~~~~~~-~~~~~~~~----~~gi~~~---~~g~-~~~~lg~~~~ 341 (556)
T TIGR01525 272 DASISEEELLALAAALEQSSS-HPLARAIVRYAKKRGLELPK-QEDVEEVP----GKGVEAT---VDGQ-EEVRIGNPRL 341 (556)
T ss_pred CCCccHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCccc-ccCeeEec----CCeEEEE---ECCe-eEEEEecHHH
Confidence 223 6778887777776654 59999999987532211110 1 112222 1112211 2331 3566799887
Q ss_pred HHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCC-CcE
Q 010523 168 ILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLG-LGV 246 (508)
Q Consensus 168 il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~G-i~v 246 (508)
+ + ... .+ .......++++.++|+|+++++++. +++|.+.++|++||+++++|+.|++.| +++
T Consensus 342 ~-~-~~~-~~-~~~~~~~~~~~~~~g~~~~~v~~~~-------------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v 404 (556)
T TIGR01525 342 L-E-LAA-EP-ISASPDLLNEGESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKL 404 (556)
T ss_pred H-h-hcC-CC-chhhHHHHHHHhhCCcEEEEEEECC-------------EEEEEEEecccchHhHHHHHHHHHHcCCCeE
Confidence 6 2 111 11 1223455677889999999999865 899999999999999999999999999 999
Q ss_pred EEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEc
Q 010523 247 KMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG 326 (508)
Q Consensus 247 ~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vG 326 (508)
+|+|||+..++..+++++|+. .+|+++.|++|.++++.++..++.|+|+|
T Consensus 405 ~ivTgd~~~~a~~i~~~lgi~------------------------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vG 454 (556)
T TIGR01525 405 VMLTGDNRSAAEAVAAELGID------------------------------EVHAELLPEDKLAIVKELQEEGGVVAMVG 454 (556)
T ss_pred EEEeCCCHHHHHHHHHHhCCC------------------------------eeeccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 999999999999999999994 36889999999999999999999999999
Q ss_pred CCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010523 327 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLEL 403 (508)
Q Consensus 327 DG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~~ 403 (508)
||.||++|++.||+||+++++++.+++.||+++.+++++.+.+++++||++++++++|+.|++..+..++.+.+..+
T Consensus 455 Dg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 455 DGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred CChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999899999999999999999999999999999999999999999998888887776554
No 31
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=5.5e-49 Score=423.08 Aligned_cols=339 Identities=27% Similarity=0.375 Sum_probs=276.7
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecc
Q 010523 9 YRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF 88 (508)
Q Consensus 9 ~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~ 88 (508)
+..++.+++++++++|||+||+++|+++..++++++|+|+++|+++++|+++++|++|||||||||+|+|+|.+.+.
T Consensus 193 ~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--- 269 (536)
T TIGR01512 193 WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP--- 269 (536)
T ss_pred cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---
Confidence 44589999999999999999999999999999999999999999999999999999999999999999999987531
Q ss_pred cCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHHH
Q 010523 89 AGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQI 168 (508)
Q Consensus 89 ~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~i 168 (508)
.+++.+++.++...+ ||++.|+++++.+.. .+.....+|. +..... .+|+ .+..|+++.+
T Consensus 270 ------~~~l~~a~~~e~~~~-hp~~~Ai~~~~~~~~----~~~~~~~~~g----~gi~~~---~~g~--~~~ig~~~~~ 329 (536)
T TIGR01512 270 ------AEVLRLAAAAEQASS-HPLARAIVDYARKRE----NVESVEEVPG----EGVRAV---VDGG--EVRIGNPRSL 329 (536)
T ss_pred ------HHHHHHHHHHhccCC-CcHHHHHHHHHHhcC----CCcceEEecC----CeEEEE---ECCe--EEEEcCHHHH
Confidence 367777776666544 599999998875321 2223333332 111111 2453 3456888766
Q ss_pred HhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCC-cEE
Q 010523 169 LNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVK 247 (508)
Q Consensus 169 l~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi-~v~ 247 (508)
.+... ..+..+|.+++.++.+. .++|.+.++|++||+++++|++|+++|+ +++
T Consensus 330 ~~~~~-------------~~~~~~~~~~~~v~~~~-------------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~ 383 (536)
T TIGR01512 330 EAAVG-------------ARPESAGKTIVHVARDG-------------TYLGYILLSDEPRPDAAEAIAELKALGIEKVV 383 (536)
T ss_pred hhcCC-------------cchhhCCCeEEEEEECC-------------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEE
Confidence 43210 14567788988887654 8999999999999999999999999999 999
Q ss_pred EEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcC
Q 010523 248 MITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGN 327 (508)
Q Consensus 248 mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGD 327 (508)
|+|||+..++..+++++|+. .+|+++.|++|..+++.++.+++.|+|+||
T Consensus 384 vvTgd~~~~a~~i~~~lgi~------------------------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGD 433 (536)
T TIGR01512 384 MLTGDRRAVAERVARELGID------------------------------EVHAELLPEDKLEIVKELREKYGPVAMVGD 433 (536)
T ss_pred EEcCCCHHHHHHHHHHcCCh------------------------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeC
Confidence 99999999999999999994 258889999999999999999999999999
Q ss_pred CCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 010523 328 GVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFL 406 (508)
Q Consensus 328 G~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~ 406 (508)
|.||++|++.||+||+++ ++++.++.+||+++.++++..+.+++.+||++++++++|+.|++..+..++.+.+..+ +
T Consensus 434 g~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~--~ 511 (536)
T TIGR01512 434 GINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGV--L 511 (536)
T ss_pred CHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--c
Confidence 999999999999999999 7899999999999999999999999999999999999999999988888877766442 1
Q ss_pred ccHHHHHHHHHhhcccccccchhHH
Q 010523 407 FTLDTVIAILQTAFTSKKDFGKEER 431 (508)
Q Consensus 407 ~pl~~~~~l~~~~~~~~~~~~~~~~ 431 (508)
-| +.-...|.+++..+..++.|
T Consensus 512 ~p---~~aa~~m~~ss~~v~~ns~r 533 (536)
T TIGR01512 512 PL---WLAVLGHEGSTVLVILNALR 533 (536)
T ss_pred cH---HHHHHHHcChHHHHHHHHHh
Confidence 12 22224455555555544443
No 32
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.6e-45 Score=379.13 Aligned_cols=324 Identities=25% Similarity=0.324 Sum_probs=259.8
Q ss_pred HHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecccC---------
Q 010523 20 LIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG--------- 90 (508)
Q Consensus 20 li~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~--------- 90 (508)
|...+|.-||+-++++...+...|+|.|++|..|-.|.-.|++|+.|||||||||+..|.|..+- ....
T Consensus 437 lTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gva--g~~~~~~~~~~~s 514 (1160)
T KOG0209|consen 437 LTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVA--GLSADEGALTPAS 514 (1160)
T ss_pred EeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecc--cccCCcccccchh
Confidence 34458999999999999999999999999999999999999999999999999999999998632 1110
Q ss_pred CCChHHHHHHHHHhc------ccCCCChHHHHHHhhhcCchhh------h----ccceEEEEecCCCCCceEEEEEEec-
Q 010523 91 GVDADTVVLMAARAS------QVENLDVIDAAIVGMLADPKEA------R----ADIQEVHFLPFDPTGKRTALTYIDS- 153 (508)
Q Consensus 91 ~~~~~~~l~~aa~~~------~~~~~~~~~~ai~~~~~~~~~~------~----~~~~~~~~~pf~~~~kr~s~~~~~~- 153 (508)
....+.+. ..+.|+ ..--.||+++|.+..++...+. + ..+++.+.+.|.|.-|||+++....
T Consensus 515 ~~p~~t~~-vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~ 593 (1160)
T KOG0209|consen 515 KAPNETVL-VLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQG 593 (1160)
T ss_pred hCCchHHH-HHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhccc
Confidence 01122233 333332 2234589999999877532221 1 2477889999999999999887642
Q ss_pred ---CCeEEEEEcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCC--------CCccCCCCCcEEEEEe
Q 010523 154 ---EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPE--------GSKESSGSPWQFIGLI 222 (508)
Q Consensus 154 ---~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~--------~~~~~~e~~l~~lG~i 222 (508)
+-+++...|||||.|.+++. +++..+++...+|+++|.|||+++|+.++. ..+++.|++|.|.|++
T Consensus 594 ~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFl 670 (1160)
T KOG0209|consen 594 PGSSEKYFVAVKGAPEVIQEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFL 670 (1160)
T ss_pred CCCceEEEEEecCCHHHHHHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeE
Confidence 23678889999999998875 677788889999999999999999999873 2467899999999999
Q ss_pred ccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCc----------------------------
Q 010523 223 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSS---------------------------- 274 (508)
Q Consensus 223 ~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~---------------------------- 274 (508)
.|.-|+|+|++++|+.|++.+++|+|+||||+.||..+|+++|+..+.....
T Consensus 671 if~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~ 750 (1160)
T KOG0209|consen 671 IFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGK 750 (1160)
T ss_pred EEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCc
Confidence 9999999999999999999999999999999999999999999966422111
Q ss_pred -----------cccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEE
Q 010523 275 -----------ALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 343 (508)
Q Consensus 275 -----------~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa 343 (508)
+++|+..+.......+..++.++.+|||+.|.||..++..|++.|+.++|+|||.||+.|||.||||||
T Consensus 751 ~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVA 830 (1160)
T KOG0209|consen 751 KKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVA 830 (1160)
T ss_pred cchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhccccee
Confidence 112222222222223456677888999999999999999999999999999999999999999999999
Q ss_pred ecCchH
Q 010523 344 VADATD 349 (508)
Q Consensus 344 ~~~~~~ 349 (508)
+-+++.
T Consensus 831 LL~~~~ 836 (1160)
T KOG0209|consen 831 LLNNPE 836 (1160)
T ss_pred hhcCCh
Confidence 875433
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-43 Score=349.09 Aligned_cols=315 Identities=26% Similarity=0.373 Sum_probs=272.4
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecccC
Q 010523 11 TGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG 90 (508)
Q Consensus 11 ~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~ 90 (508)
-.+..++++|++.||-.++-.++.--..|+.|+.+.|++-+++.++|..|.+|++..|||||+|.|+-.-.+.+ -.+
T Consensus 248 ~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p~~ 324 (681)
T COG2216 248 ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI---PVP 324 (681)
T ss_pred cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee---cCC
Confidence 35778899999999999999999888889999999999999999999999999999999999999987765543 245
Q ss_pred CCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchh-h-hccce-EEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHH
Q 010523 91 GVDADTVVLMAARASQVENLDVIDAAIVGMLADPKE-A-RADIQ-EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQ 167 (508)
Q Consensus 91 ~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~-~-~~~~~-~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~ 167 (508)
+.+.+++...+..++-. .+.|..+.|+..+.+... . ....+ ...+.||+.+.++..+-.. ++ ..+.||+.+.
T Consensus 325 gv~~~~la~aa~lsSl~-DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~da 399 (681)
T COG2216 325 GVSEEELADAAQLASLA-DETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDA 399 (681)
T ss_pred CCCHHHHHHHHHHhhhc-cCCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccCC--CC--ceeecccHHH
Confidence 78888888877776654 334777778776543211 1 11222 3578999987766655332 23 6778999999
Q ss_pred HHhhhcCCh-hHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcE
Q 010523 168 ILNLLHNKS-KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGV 246 (508)
Q Consensus 168 il~~~~~~~-~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v 246 (508)
+........ ..++.+....++.++.|-++|.|+.++ +++|++.++|-+||+.+|-+.+||+.||+.
T Consensus 400 i~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkT 466 (681)
T COG2216 400 IRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKT 466 (681)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeE
Confidence 998876433 478889999999999999999999876 999999999999999999999999999999
Q ss_pred EEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEc
Q 010523 247 KMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG 326 (508)
Q Consensus 247 ~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vG 326 (508)
+|+||||+.||..+|++.|+++ ..|+++||+|.++|+.-|.+|+.|+|+|
T Consensus 467 vM~TGDN~~TAa~IA~EAGVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtG 516 (681)
T COG2216 467 VMITGDNPLTAAAIAAEAGVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTG 516 (681)
T ss_pred EEEeCCCHHHHHHHHHHhCchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcC
Confidence 9999999999999999999963 5799999999999999999999999999
Q ss_pred CCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHH
Q 010523 327 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRA 376 (508)
Q Consensus 327 DG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~ 376 (508)
||.||+|||.+||||+||.+|+++||++++.|=+|.|...+.+.++.|++
T Consensus 517 DGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKq 566 (681)
T COG2216 517 DGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQ 566 (681)
T ss_pred CCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceehHhhhhhh
Confidence 99999999999999999999999999999999999999999999999987
No 34
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.95 E-value=6.7e-28 Score=229.45 Aligned_cols=211 Identities=31% Similarity=0.404 Sum_probs=155.9
Q ss_pred ccEEEcccccccccCceEEEeeeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCC
Q 010523 62 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 141 (508)
Q Consensus 62 i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~ 141 (508)
|++||||||||||+|++.+ . . .+...++.++...+..++| |++.++..+....... ........++
T Consensus 1 i~~i~fDktGTLt~~~~~v-~-----~---~~~~~~~~~~~~~~~~s~~-p~~~~~~~~~~~~~~~-~~~~~~~~~~--- 66 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV-A-----P---PSNEAALAIAAALEQGSEH-PIGKAIVEFAKNHQWS-KSLESFSEFI--- 66 (215)
T ss_dssp ESEEEEECCTTTBESHHEE-E-----S---CSHHHHHHHHHHHHCTSTS-HHHHHHHHHHHHHHHH-SCCEEEEEET---
T ss_pred CeEEEEecCCCcccCeEEE-E-----e---ccHHHHHHHHHHhhhcCCC-cchhhhhhhhhhccch-hhhhhheeee---
Confidence 6899999999999999998 1 0 4566777777666666554 9999999876542211 1122222222
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEE
Q 010523 142 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 221 (508)
Q Consensus 142 ~~kr~s~~~~~~~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~ 221 (508)
.+...... ++. +. |+++.+....... .............|.+.+.++. ++.++|.
T Consensus 67 --~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 67 --GRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp --TTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred --eccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 11111111 111 22 8888886654321 1112222334566777777775 3489999
Q ss_pred eccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEe
Q 010523 222 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 301 (508)
Q Consensus 222 i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 301 (508)
+.+.|++|++++++|+.|+++|++++|+|||+..++..+++.+||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 23799
Q ss_pred ec--ChhhH--HHHHHHHhhcCCEEEEEcCCCCChhhhhcCC
Q 010523 302 GV--FPEHK--YEIVKHLQARNHICGMIGNGVNDAPALKKAD 339 (508)
Q Consensus 302 ~~--~P~~K--~~iV~~l~~~g~~v~~vGDG~ND~~al~~Ad 339 (508)
++ +|++| ..+++.|+.+++.|+|+|||.||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
No 35
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.66 E-value=5.9e-16 Score=129.65 Aligned_cols=123 Identities=28% Similarity=0.409 Sum_probs=109.9
Q ss_pred EEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhh
Q 010523 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 296 (508)
Q Consensus 217 ~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
.+.+.++---++=++++++|++|++. ++|++.|||..-+....|+.+|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 57888888899999999999999999 99999999999999999999999643
Q ss_pred cceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEe-c--CchHHHHhhcchhccCCChhHHHHH
Q 010523 297 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-A--DATDAARSAADIVLTEPGLNVIITA 370 (508)
Q Consensus 297 ~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~-~--~~~~~a~~aADivl~~~~l~~i~~~ 370 (508)
.+|+...|+.|..+++.|+.++++|.|+|||+||.+||++||+||.. + +..+.+..+||+|+.+ ...++++
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 57999999999999999999999999999999999999999999885 4 4677788999999865 5544443
No 36
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.14 E-value=1.5e-10 Score=116.59 Aligned_cols=131 Identities=19% Similarity=0.241 Sum_probs=99.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceE-eecCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~~P 305 (508)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|+.....+...+.+.... . .+. .-+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~lt----g----------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLT----G----------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEE----e----------EecCccCCc
Confidence 58899999999999999999999999988888899999984311000000000000 0 000 01234
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
+.|.+.++.+.++ ...|+++|||.||.+|++.|++|||+ ++.+..++.||.++..+++++++.++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6788888877654 35799999999999999999999999 888999999999999999999987664
No 37
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.10 E-value=5.7e-10 Score=105.39 Aligned_cols=131 Identities=15% Similarity=0.128 Sum_probs=95.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
+++|++.+.|+.+++.| ++.++||.....+..+++.+|+.........+.+.. .+ .......++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g---~~------------tG~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---RV------------VGYQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC---ee------------ECeeecCcc
Confidence 57999999999999975 999999999999999999999963211111111100 00 000114578
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 374 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~ 374 (508)
+|..+++.+++.+..+.++|||.||.+|++.||+||++..... .+++||=.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~-~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPEN-VIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHH-HHHhCCCCCcccCHHHHHHHHHHH
Confidence 8999999998888889999999999999999999999975444 444555443345677777777655
No 38
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.08 E-value=5.5e-10 Score=107.60 Aligned_cols=145 Identities=26% Similarity=0.330 Sum_probs=101.0
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CCcc-cc---CC-----chh---h---hh-----
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSA-LS---GQ-----DRD---E---SI----- 285 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~-~~---~~-----~~~---~---~~----- 285 (508)
+.+.+.++|+++++.|++++++||+....+..+.+.+|+..... ++.. .. +. ..+ + ..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 67899999999999999999999999999999999999853211 1111 10 00 000 0 00
Q ss_pred ------h---------------cCC---hhHHhhhc----c-----eEeecChhh--HHHHHHHHhhc----CCEEEEEc
Q 010523 286 ------V---------------ALP---VDELIEKA----D-----GFAGVFPEH--KYEIVKHLQAR----NHICGMIG 326 (508)
Q Consensus 286 ------~---------------~~~---~~~~~~~~----~-----v~a~~~P~~--K~~iV~~l~~~----g~~v~~vG 326 (508)
. ..+ ..+.+++. . .+..+.|.. |..-++.+.+. ...++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 0 000 00111111 0 112334433 77766666543 34699999
Q ss_pred CCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 327 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 327 DG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
|+.||.+|++.|++|+||+++.+.+|+.||+|..+++-+++.++|+
T Consensus 181 D~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 9999999999999999999999999999999999999999998876
No 39
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.05 E-value=4.6e-10 Score=110.93 Aligned_cols=66 Identities=23% Similarity=0.234 Sum_probs=56.0
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.|..-++.|.+. ...|+++|||.||.+||+.|++|+||+||.+.+|++||+|+.+++-+++.++|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 355555554433 245999999999999999999999999999999999999999999999998886
No 40
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.04 E-value=1.9e-09 Score=106.22 Aligned_cols=153 Identities=19% Similarity=0.193 Sum_probs=105.7
Q ss_pred EeccCCC-CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CC-------ccccCCchh--------
Q 010523 221 LIPLFDP-PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PS-------SALSGQDRD-------- 282 (508)
Q Consensus 221 ~i~l~D~-~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~-------~~~~~~~~~-------- 282 (508)
.+.-.+. +.+.+.++|+++++.|+++.++||.....+..+.+++++..-.+ ++ ..+.....+
T Consensus 13 TLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~ 92 (264)
T COG0561 13 TLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELL 92 (264)
T ss_pred CccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHH
Confidence 3333444 88999999999999999999999999999999999999964110 00 000000000
Q ss_pred ------------------------h---------------------hhh----------cCChhHH---hhh-----cce
Q 010523 283 ------------------------E---------------------SIV----------ALPVDEL---IEK-----ADG 299 (508)
Q Consensus 283 ------------------------~---------------------~~~----------~~~~~~~---~~~-----~~v 299 (508)
. ... .....+. +.+ ...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 172 (264)
T COG0561 93 ELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLT 172 (264)
T ss_pred HHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceE
Confidence 0 000 0000010 000 001
Q ss_pred E-------eecChh--hHHHHHHHHhhc-CC---EEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhH
Q 010523 300 F-------AGVFPE--HKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV 366 (508)
Q Consensus 300 ~-------a~~~P~--~K~~iV~~l~~~-g~---~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~ 366 (508)
+ ..+.|. +|..-++.+.+. |- .|+++||+.||.+||+.|+.||||+|+.+.+++.||++...++-++
T Consensus 173 ~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~G 252 (264)
T COG0561 173 VSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDG 252 (264)
T ss_pred EEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchH
Confidence 1 233343 687777777663 43 4999999999999999999999999999999999999989999999
Q ss_pred HHHHHHH
Q 010523 367 IITAVLI 373 (508)
Q Consensus 367 i~~~i~~ 373 (508)
|.++|+.
T Consensus 253 v~~~l~~ 259 (264)
T COG0561 253 VAEALEK 259 (264)
T ss_pred HHHHHHH
Confidence 9988874
No 41
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.03 E-value=1e-09 Score=104.77 Aligned_cols=144 Identities=21% Similarity=0.249 Sum_probs=99.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccCC--------chhhhhh----------
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQ--------DRDESIV---------- 286 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~~~~~--------~~~~~~~---------- 286 (508)
.+-+.+.++|++|++.|+++.++||.....+..+.+.+++....+ +...+... .....+.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 377899999999999999999999999999999999999853211 11111000 0000000
Q ss_pred -----cC------------C---hhHHhhhcc-------eEeecCh--hhHHHHHHHHhhc----CCEEEEEcCCCCChh
Q 010523 287 -----AL------------P---VDELIEKAD-------GFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAP 333 (508)
Q Consensus 287 -----~~------------~---~~~~~~~~~-------v~a~~~P--~~K~~iV~~l~~~----g~~v~~vGDG~ND~~ 333 (508)
.. . ..+.+++.. .+..++| ..|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00 0 000111111 1123333 4788777777553 235999999999999
Q ss_pred hhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHH
Q 010523 334 ALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 370 (508)
Q Consensus 334 al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~ 370 (508)
|++.|++|+||+++.+.+++.||+|...++-+++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999988888888765
No 42
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.97 E-value=1.8e-09 Score=98.71 Aligned_cols=104 Identities=18% Similarity=0.251 Sum_probs=83.2
Q ss_pred HHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeec--ChhhHHHH
Q 010523 234 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV--FPEHKYEI 311 (508)
Q Consensus 234 ~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~--~P~~K~~i 311 (508)
..|+.|++.|+++.++|+.+...+....+.+|+.. .|... .|+-...+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------------~f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------------FHEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------------EEecCCCCHHHHHHH
Confidence 46899999999999999999999999999999952 22222 23333444
Q ss_pred HHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHH
Q 010523 312 VKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVI 367 (508)
Q Consensus 312 V~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i 367 (508)
++.++-....|+++||+.||.+|++.|+++++|+++.+.++..|++|+..++-.+.
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 44444344679999999999999999999999999999999999999876665544
No 43
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.97 E-value=2.8e-09 Score=101.92 Aligned_cols=129 Identities=21% Similarity=0.267 Sum_probs=93.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEee-cCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG-VFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~-~~P 305 (508)
++++++.+.++.|++.|+++.++||.....+..+.+.+|+.. .+.......+.. +. ..+... ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~---~~----------~~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA-AFANRLEVEDGK---LT----------GLVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc-eEeeEEEEECCE---EE----------EEecCcccCC
Confidence 579999999999999999999999999999999999999853 111111100000 00 000001 123
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHH
Q 010523 306 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 370 (508)
Q Consensus 306 ~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~ 370 (508)
..|..+++.+.++ ...|+++||+.||.++++.|+++++++ +.+..+++||+++.++++..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 3466777665544 246999999999999999999999985 567788899999999999887654
No 44
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.96 E-value=2.6e-09 Score=105.78 Aligned_cols=66 Identities=17% Similarity=0.172 Sum_probs=56.4
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcch--hccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI--VLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADi--vl~~~~l~~i~~~i~ 372 (508)
.|..-++.|.+. ...|+++|||.||.+||+.|+.||||+|+.+.+|++||. |+.+++-+++.++|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 476666666543 246999999999999999999999999999999999997 777888999998875
No 45
>PRK10976 putative hydrolase; Provisional
Probab=98.93 E-value=4.5e-09 Score=103.62 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=55.2
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcc--hhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD--IVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aAD--ivl~~~~l~~i~~~i~ 372 (508)
.|..-++.+.+. ...|+++||+.||.+||+.|+.|+||+||.+.+|+.|| .|+.+++-+++.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 365555555443 24599999999999999999999999999999999988 6778888999998886
No 46
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.93 E-value=2.3e-09 Score=96.82 Aligned_cols=117 Identities=25% Similarity=0.314 Sum_probs=88.0
Q ss_pred EEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhh
Q 010523 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 296 (508)
Q Consensus 217 ~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
++++.+.+.|. .+|++|++.|+++.++||+....+..+.+.+|+...
T Consensus 24 ~~~~~~~~~~~------~~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------- 70 (154)
T TIGR01670 24 EEIKAFNVRDG------YGIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------- 70 (154)
T ss_pred cEEEEEechhH------HHHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------
Confidence 34555544443 289999999999999999999999999999998521
Q ss_pred cceEeecChhhHHHHHHHHhh----cCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhH-HHHHH
Q 010523 297 ADGFAGVFPEHKYEIVKHLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV-IITAV 371 (508)
Q Consensus 297 ~~v~a~~~P~~K~~iV~~l~~----~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~-i~~~i 371 (508)
|... ..|.+.++.+.+ ....|+|+||+.||.+|++.|++++++.++.+..+..||+++..+.-.+ +.+++
T Consensus 71 ---~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 71 ---YQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred ---Eecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 1111 234444444332 3467999999999999999999999999988889999999998776444 44433
No 47
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.92 E-value=4.3e-09 Score=100.92 Aligned_cols=146 Identities=23% Similarity=0.258 Sum_probs=98.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CCc-cccCCc--------hhh-h----------
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSS-ALSGQD--------RDE-S---------- 284 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~-~~~~~~--------~~~-~---------- 284 (508)
.+.+.+.++|+++++.|++++++||++...+..+.+.+|+....+ +.. +...+. ... .
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 367888999999999999999999999999999999999643211 010 000000 000 0
Q ss_pred ----hh-cC-------------C---hhHHhhhc---------ceEeecCh--hhHHHHHHHHhhc----CCEEEEEcCC
Q 010523 285 ----IV-AL-------------P---VDELIEKA---------DGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNG 328 (508)
Q Consensus 285 ----~~-~~-------------~---~~~~~~~~---------~v~a~~~P--~~K~~iV~~l~~~----g~~v~~vGDG 328 (508)
.. .. . ...+.++. ..+..+.| .+|..-++.+.++ ...|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 00 0 00111111 01223333 3677777776553 3569999999
Q ss_pred CCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhH----HHHHHH
Q 010523 329 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV----IITAVL 372 (508)
Q Consensus 329 ~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~----i~~~i~ 372 (508)
.||.+|++.|++|+||+|+.+.+|+.||.|...++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998888888 655554
No 48
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.89 E-value=7.3e-09 Score=98.38 Aligned_cols=122 Identities=20% Similarity=0.173 Sum_probs=88.6
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceE-eecC
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVF 304 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~~ 304 (508)
.+++|++.+.++.+++.|.+|+++||-...-+..+++.+|+....-+.....+.... . .+. --+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~lt----G----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLT----G----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEe----c----------eeeeeecC
Confidence 568999999999999999999999999999999999999996533221111110000 0 122 2345
Q ss_pred hhhHHHHHHHHhhc-CC---EEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCC
Q 010523 305 PEHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 362 (508)
Q Consensus 305 P~~K~~iV~~l~~~-g~---~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~ 362 (508)
.+.|...++.+.+. |. .+.++|||.||.|||+.|+.+|++.... ..+..|+......
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~-~l~~~a~~~~~~~ 202 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKP-KLRALADVRIWPI 202 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCH-HHHHHHHHhcChh
Confidence 57888888666553 44 5999999999999999999999997433 3555666665443
No 49
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.83 E-value=1.3e-08 Score=98.48 Aligned_cols=66 Identities=23% Similarity=0.201 Sum_probs=56.7
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 010523 306 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 306 ~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i 371 (508)
..|..-++.+.+. ...++++||+.||.+||+.|+.|+||+++++..+..||+++...+-++|.++|
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 4688877777653 35799999999999999999999999999999999999999988778888765
No 50
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.82 E-value=1.9e-08 Score=99.42 Aligned_cols=66 Identities=23% Similarity=0.333 Sum_probs=55.5
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~-g---~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.|...++.+.++ | ..|+++||+.||.+|++.|++|++|+++.+..+..||+|+.+++-+++.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 355555544332 2 45999999999999999999999999999999999999999999999998886
No 51
>PLN02887 hydrolase family protein
Probab=98.81 E-value=1.7e-08 Score=108.96 Aligned_cols=52 Identities=23% Similarity=0.401 Sum_probs=49.8
Q ss_pred EEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 321 ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 321 ~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.|+++|||.||.+||+.|++||||+||.+.+|+.||+|..+++-++|.++|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 5999999999999999999999999999999999999999999999998886
No 52
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.76 E-value=1.7e-08 Score=82.50 Aligned_cols=64 Identities=30% Similarity=0.383 Sum_probs=52.2
Q ss_pred CCChHHHHHHhhhcCc------hhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhhc
Q 010523 109 NLDVIDAAIVGMLADP------KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH 173 (508)
Q Consensus 109 ~~~~~~~ai~~~~~~~------~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~il~~~~ 173 (508)
..+|.+.|++.++... ...+..++.++.+||+|.+|||+++++ .++...+++|||||.|+++|+
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcC
Confidence 4568888888876533 345678999999999999999999998 334566799999999999996
No 53
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.69 E-value=4.7e-08 Score=90.88 Aligned_cols=102 Identities=26% Similarity=0.334 Sum_probs=80.1
Q ss_pred HHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHH
Q 010523 234 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 313 (508)
Q Consensus 234 ~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~ 313 (508)
..|+.|++.|+++.++||.....+..+++.+|+.. +|.. .+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~------------------------------~f~g--~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH------------------------------LYQG--QSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce------------------------------eecC--CCcHHHHHH
Confidence 58999999999999999999999999999999842 1221 233544444
Q ss_pred HHhh----cCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHH
Q 010523 314 HLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVI 367 (508)
Q Consensus 314 ~l~~----~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i 367 (508)
.+.+ ....|+||||+.||.+|++.|+++++++++.+..+..||+++..++-.+.
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~ 160 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGA 160 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCH
Confidence 4422 23579999999999999999999999988888888999999975543333
No 54
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.68 E-value=3.8e-08 Score=96.51 Aligned_cols=65 Identities=23% Similarity=0.292 Sum_probs=55.8
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i 371 (508)
.|..-++.+.+. ...++++||+.||.+|++.|++|++|+++.+.+++.||+++.+++-++|.++|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 477777776554 24699999999999999999999999999999999999999988888887653
No 55
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.67 E-value=1.7e-07 Score=88.62 Aligned_cols=128 Identities=20% Similarity=0.230 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++. +++.++|+.....+..+.+.+|+...........++.. +. ......|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~---i~------------~~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM---IT------------GYDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe---EE------------Cccccccc
Confidence 3579999999999999 99999999999999999999998531111111100000 00 00012467
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcch-hccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI-VLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADi-vl~~~~l~~i~~~i~ 372 (508)
.|...++.++..+..++|+|||.||.+|.+.|++|+.++.........++. ++ +++..+...+.
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 888889999888899999999999999999999999887544444445555 44 44676665544
No 56
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.65 E-value=1.7e-07 Score=91.97 Aligned_cols=66 Identities=18% Similarity=0.222 Sum_probs=53.4
Q ss_pred hHHHHHHHHhh----c--CCEEEEEcCCCCChhhhhcCCeeEEecCch---HHHHhh---cchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQA----R--NHICGMIGNGVNDAPALKKADIGIAVADAT---DAARSA---ADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~----~--g~~v~~vGDG~ND~~al~~AdvGIa~~~~~---~~a~~a---ADivl~~~~l~~i~~~i~ 372 (508)
.|..-++.+.+ . ...++++||+.||.+||+.|++||||+|+. +..|+. +++|...++-+++.++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 45555555543 3 567999999999999999999999999987 468876 458888999999998886
No 57
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.64 E-value=8.5e-08 Score=83.84 Aligned_cols=113 Identities=24% Similarity=0.393 Sum_probs=89.3
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHH
Q 010523 235 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 314 (508)
Q Consensus 235 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 314 (508)
-|+.++++||+|.++||.+...+..-++.+||.. +|-. -++|....+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------------------------------~~qG--~~dK~~a~~~ 90 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------------------------------LYQG--ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------------------------------eeec--hHhHHHHHHH
Confidence 3899999999999999999999999999999941 2222 3566666655
Q ss_pred Hhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhH----HHHHHHHHHHHHH
Q 010523 315 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV----IITAVLISRAIFQ 379 (508)
Q Consensus 315 l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~----i~~~i~~~R~~~~ 379 (508)
|.++ -..|+++||..||.|+|+..++++|+.++.+..++.||+|+...+-.+ +.++|..++..+.
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 5443 456999999999999999999999999999999999999998766444 4455555544433
No 58
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.59 E-value=1.9e-07 Score=87.75 Aligned_cols=117 Identities=25% Similarity=0.331 Sum_probs=82.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
+++|++.++++.|++.|+++.++|+-....+..+.+.+|+.. .+.......+... . +-..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~--~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGF--I----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCe--E----------ecceeeEEccc
Confidence 478999999999999999999999999999999999999742 1111111110000 0 00112224466
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcc
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 356 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aAD 356 (508)
.|..+++.+.++ ...++++||+.||.+|++.|++++++.......+.++|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 777777666443 34699999999999999999999999865555666665
No 59
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.59 E-value=2.8e-07 Score=91.27 Aligned_cols=66 Identities=21% Similarity=0.174 Sum_probs=52.3
Q ss_pred hHHHHHHHHhh-------cCCEEEEEcCCCCChhhhhcCCeeEEecCch-HH-----HHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQA-------RNHICGMIGNGVNDAPALKKADIGIAVADAT-DA-----ARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~-------~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~-~~-----a~~aADivl~~~~l~~i~~~i~ 372 (508)
+|..-++.+.+ ....|+++||+.||.+||+.|++||||+++. +. .+..+|++....+-+++.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 46655555533 3457999999999999999999999999544 21 3457999999999999998887
No 60
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.57 E-value=4.9e-07 Score=86.23 Aligned_cols=139 Identities=13% Similarity=0.017 Sum_probs=87.5
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC-CccccCCchhhhhhcCChhHHhhhcceEe-ec
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP-SSALSGQDRDESIVALPVDELIEKADGFA-GV 303 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~a-~~ 303 (508)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++....++. ...+.++.... ..+..+.. .+. .+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~---~~p~~~~~----~~~~~c 141 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI---DWPHPCDG----TCQNQC 141 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE---eCCCCCcc----ccccCC
Confidence 36899999999999999999999999999888888888754333222 12222221110 00000000 000 11
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 304 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
...|..+++.++.....|+|+|||.||.+|++.||+.++-+.-.+-.+..---...-.+|..+...+.
T Consensus 142 -g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 142 -GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred -CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 34689999998888888999999999999999999987754211111111111122255777766554
No 61
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.51 E-value=5.6e-07 Score=89.20 Aligned_cols=66 Identities=24% Similarity=0.327 Sum_probs=54.4
Q ss_pred hHHHHHHHHhh----cC-CEEEEEcCCCCChhhhhcCCeeEEecCchHHHH----hhc-chhc--cCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQA----RN-HICGMIGNGVNDAPALKKADIGIAVADATDAAR----SAA-DIVL--TEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~----~g-~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~----~aA-Divl--~~~~l~~i~~~i~ 372 (508)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|+||.+.++ .+| +.+. ..++-+++.++|+
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56666655543 35 889999999999999999999999999999988 666 6777 5777889988876
No 62
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.46 E-value=3.4e-07 Score=82.81 Aligned_cols=122 Identities=19% Similarity=0.258 Sum_probs=83.1
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCC-CCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTN-MYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
+-|++++.++.|++.|.+|.++||.-...+..++.++||+.. .+....+.+..-. +..... --.-+...
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk--~~gfd~--------~~ptsdsg 158 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK--YLGFDT--------NEPTSDSG 158 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc--cccccc--------CCccccCC
Confidence 468999999999999999999999999999999999999752 3322222221110 000000 00112234
Q ss_pred hHHHHHHHHhhc--CCEEEEEcCCCCChhhhhcCCeeEEecC--chHHHHhhcchhc
Q 010523 307 HKYEIVKHLQAR--NHICGMIGNGVNDAPALKKADIGIAVAD--ATDAARSAADIVL 359 (508)
Q Consensus 307 ~K~~iV~~l~~~--g~~v~~vGDG~ND~~al~~AdvGIa~~~--~~~~a~~aADivl 359 (508)
.|.+++..+++. ...++|||||.||.+|+..||.=|+.+. --+..+..|+..+
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~ 215 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYV 215 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccCCceEcHhhHhccHHHH
Confidence 688999988874 3468999999999999999887777652 2333444454443
No 63
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.41 E-value=3.8e-07 Score=84.90 Aligned_cols=92 Identities=24% Similarity=0.289 Sum_probs=68.8
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh---
Q 010523 230 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE--- 306 (508)
Q Consensus 230 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~--- 306 (508)
+++.+.|+.++++|++++|+||+....+..+++.+|++........+.... ......+.+|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 788899999999999999999999999999999999964211111111000 01123444444
Q ss_pred hHHHHHHHH------hhcCCEEEEEcCCCCChhhhh
Q 010523 307 HKYEIVKHL------QARNHICGMIGNGVNDAPALK 336 (508)
Q Consensus 307 ~K~~iV~~l------~~~g~~v~~vGDG~ND~~al~ 336 (508)
.|...++.+ +.....++++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 399999999 445789999999999999986
No 64
>PLN02954 phosphoserine phosphatase
Probab=98.38 E-value=2.5e-06 Score=81.69 Aligned_cols=130 Identities=22% Similarity=0.307 Sum_probs=83.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC-CCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++|++.++++.|++.|+++.++||.....+..+.+.+|+.. +.+...+..+.+. ....... .. ......
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g--~~~g~~~------~~--~~~~~~ 154 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG--EYAGFDE------NE--PTSRSG 154 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC--cEECccC------CC--cccCCc
Confidence 67999999999999999999999999999999999999963 2221111110000 0000000 00 001123
Q ss_pred hHHHHHHHHhhc--CCEEEEEcCCCCChhhhhc--CCeeEEecCc--hHHHHhhcchhccCCChhHHHH
Q 010523 307 HKYEIVKHLQAR--NHICGMIGNGVNDAPALKK--ADIGIAVADA--TDAARSAADIVLTEPGLNVIIT 369 (508)
Q Consensus 307 ~K~~iV~~l~~~--g~~v~~vGDG~ND~~al~~--AdvGIa~~~~--~~~a~~aADivl~~~~l~~i~~ 369 (508)
.|...++.+.++ ...++++||+.||..|.+. ++++++.+.. .+.....+|+++.+ +..+..
T Consensus 155 ~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~ 221 (224)
T PLN02954 155 GKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIE 221 (224)
T ss_pred cHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHH
Confidence 477777766654 3579999999999999887 5666666532 23344568988854 666654
No 65
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.36 E-value=2e-06 Score=82.31 Aligned_cols=135 Identities=15% Similarity=0.076 Sum_probs=83.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCC-CCC-CccccCCchhhhhhcCChhHHhhhcceEeecC
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTN-MYP-SSALSGQDRDESIVALPVDELIEKADGFAGVF 304 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 304 (508)
+++|++.++++.|++.|+++.++||-....+..+.+.+ +... .+. ...+.++.... ..+..... -+..-.
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~---~kp~p~~~----~~~~~~ 145 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI---TWPHPCDE----HCQNHC 145 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE---eccCCccc----cccccC
Confidence 57999999999999999999999999999999988887 6431 110 11122211100 00000000 000000
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHh--hcchhccCCChhHHHHHH
Q 010523 305 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARS--AADIVLTEPGLNVIITAV 371 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~--aADivl~~~~l~~i~~~i 371 (508)
...|..+++.++..+..|+|+|||.||.+|.+.||+.++-+.-.+.+++ .+.+.+ .+|..+...+
T Consensus 146 ~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 146 GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 1247888888888778899999999999999999997773311122111 133333 4566666554
No 66
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.27 E-value=3.2e-06 Score=78.41 Aligned_cols=110 Identities=17% Similarity=0.131 Sum_probs=75.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchh---hhhhcCChhHHhhhcceEee-
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRD---ESIVALPVDELIEKADGFAG- 302 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~a~- 302 (508)
++++++.+.++.|++.|+++.++|+........+.+..|+.... . .++...... ......+ .++..+..
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~-~i~~~~~~~~~~g~~~~~~-----~~~~~~~~~ 144 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF-I-EIYSNPASFDNDGRHIVWP-----HHCHGCCSC 144 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe-e-EEeccCceECCCCcEEEec-----CCCCccCcC
Confidence 67899999999999999999999999999999999988885321 1 111111000 0000000 00001111
Q ss_pred cChhhHHHHHHHHhhc-CCEEEEEcCCCCChhhhhcCCeeEE
Q 010523 303 VFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIA 343 (508)
Q Consensus 303 ~~P~~K~~iV~~l~~~-g~~v~~vGDG~ND~~al~~AdvGIa 343 (508)
.....|..+++.++.. ...++++|||.||..|.+.||+-.|
T Consensus 145 ~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 1223588999999887 8899999999999999999987654
No 67
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.19 E-value=2.9e-06 Score=77.94 Aligned_cols=100 Identities=19% Similarity=0.237 Sum_probs=69.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+++++.+.++.+++.|++++++||.....+..+++.+|+.. .+.......++. .+... . ..-....+..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~~~~~g--~~~g~----~----~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLEFDDNG--LLTGP----I----EGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEEECCCC--EEeCc----c----CCcccCCcch
Confidence 57999999999999999999999999999999999999852 111111100000 00000 0 0001245678
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCCCChhhhhcC
Q 010523 308 KYEIVKHLQAR----NHICGMIGNGVNDAPALKKA 338 (508)
Q Consensus 308 K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~A 338 (508)
|...++.+.+. ...++++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99888887654 34699999999999999875
No 68
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.18 E-value=8.6e-06 Score=77.93 Aligned_cols=128 Identities=16% Similarity=0.166 Sum_probs=88.8
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
.++.|++.+.++.|++.|+++.++||........+.+.+|+.... ..++.++... .....|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 152 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDSLP-----------------NKKPDP 152 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCCCC-----------------CCCcCh
Confidence 357899999999999999999999999999999999999985321 1111111100 011123
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecC----chHHHHhhcchhccCCChhHHHHHHHHH
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAVLIS 374 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~----~~~~a~~aADivl~~~~l~~i~~~i~~~ 374 (508)
+--..+++.++.....++++||+.||+.+.+.+++ +|.+.. ..+.....+|+++ +++..+...+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 153 APLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred HHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 32344555565566789999999999999999998 566542 2334445688887 5688888777643
No 69
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.15 E-value=6.6e-06 Score=77.43 Aligned_cols=108 Identities=16% Similarity=0.123 Sum_probs=76.3
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceE-eecC
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVF 304 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~~ 304 (508)
.++++++.+.|+.+++.|++++++||.....+..+++.+|+.. .+......+++. ..... +. ..+.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~g--~~~g~----------~~~~~~~ 152 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESEDG--IYTGN----------IDGNNCK 152 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCCC--EEeCC----------ccCCCCC
Confidence 4579999999999999999999999999999999999999853 211111110000 00000 00 1234
Q ss_pred hhhHHHHHHHHhh-cC---CEEEEEcCCCCChhhhhcCCeeEEecC
Q 010523 305 PEHKYEIVKHLQA-RN---HICGMIGNGVNDAPALKKADIGIAVAD 346 (508)
Q Consensus 305 P~~K~~iV~~l~~-~g---~~v~~vGDG~ND~~al~~AdvGIa~~~ 346 (508)
++.|...++.+.+ .+ ..+.++||+.+|.+|++.|+.++++..
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 5778877766544 33 368999999999999999999998863
No 70
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.12 E-value=1e-05 Score=78.96 Aligned_cols=147 Identities=16% Similarity=0.141 Sum_probs=96.5
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCC--C--CCc-cccCC-c-hhh---------------
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM--Y--PSS-ALSGQ-D-RDE--------------- 283 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~--~--~~~-~~~~~-~-~~~--------------- 283 (508)
.+..|...++++++++.|+.++++||........+.+.+++.... + ++. ++.+. . .+.
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 345688899999999999999999999999999999988875431 1 111 11110 0 000
Q ss_pred --hhh---cC--------------------C----h---hHHhhh----cce-Ee-----ecCh--hhHHHHHHHHhhc-
Q 010523 284 --SIV---AL--------------------P----V---DELIEK----ADG-FA-----GVFP--EHKYEIVKHLQAR- 318 (508)
Q Consensus 284 --~~~---~~--------------------~----~---~~~~~~----~~v-~a-----~~~P--~~K~~iV~~l~~~- 318 (508)
... .. . . .+.+.. ..+ ++ .+.| ..|...++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 000 00 0 0 000110 000 11 2343 3677777777653
Q ss_pred ---CCEEEEEcCCCCChhhhhc-CCeeEEecCchHHHHhhcc-------hhccCCChhHHHHHHH
Q 010523 319 ---NHICGMIGNGVNDAPALKK-ADIGIAVADATDAARSAAD-------IVLTEPGLNVIITAVL 372 (508)
Q Consensus 319 ---g~~v~~vGDG~ND~~al~~-AdvGIa~~~~~~~a~~aAD-------ivl~~~~l~~i~~~i~ 372 (508)
...|+++||+.||.+|++. ++.|++|+++.+..++.++ ++....+-+++.+++.
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3579999999999999998 6799999999998887654 6666667788888776
No 71
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.10 E-value=1.4e-05 Score=76.59 Aligned_cols=127 Identities=19% Similarity=0.212 Sum_probs=92.4
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecC
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 304 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 304 (508)
...+-|++++++..|+++|++..++|++....+..+.+..|+..-.. .+..++.. ....-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~--~i~g~~~~-----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD--VIVGGDDV-----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc--eEEcCCCC-----------------CCCCcC
Confidence 34577899999999999999999999999999999999999964321 11111100 112235
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCC---eeEEecC--chHHHHhhcchhccCCChhHHHHHHH
Q 010523 305 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD---IGIAVAD--ATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Ad---vGIa~~~--~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
|.....+++.+......++||||..+|..|-++|+ ||+..|. ........+|+++.+ +..+...+.
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l~ 218 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALLA 218 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHHh
Confidence 66666666776666557999999999999999998 6666663 345566779999844 777665543
No 72
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.05 E-value=1.7e-05 Score=74.94 Aligned_cols=124 Identities=17% Similarity=0.212 Sum_probs=83.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.++++.|++.|+++.++||.....+....+.+|+.... . .++..++. ....-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-~-~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-D-HVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-e-eEEecCcC-----------------CCCCCChH
Confidence 57899999999999999999999999998888888888884311 1 11111000 01122333
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEe--c--CchHHHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV--A--DATDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~--~--~~~~~a~~aADivl~~~~l~~i~~~i 371 (508)
--..+++.++-....|+||||+.+|..+-+.+++. |++ | ...+..+..+|+++. ++..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHh
Confidence 33445555555567899999999999999999984 333 3 233445667898874 466665544
No 73
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.96 E-value=2.2e-05 Score=67.87 Aligned_cols=118 Identities=15% Similarity=0.076 Sum_probs=75.7
Q ss_pred ccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEee
Q 010523 223 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 302 (508)
Q Consensus 223 ~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 302 (508)
....++.+++.+.+++|++.|++++++||.....+....+.+|+... ...++........... ...........+..
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPK-EGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhccc-ccccccccccccCC
Confidence 34558899999999999999999999999999999999999887311 1111111100000000 00000011112334
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcC-CeeEE
Q 010523 303 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA-DIGIA 343 (508)
Q Consensus 303 ~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~A-dvGIa 343 (508)
-.|+.+..+.+.+......++++||+.+|..|++.+ .-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 456666666677666667899999999999999984 44554
No 74
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.95 E-value=1e-05 Score=78.33 Aligned_cols=66 Identities=17% Similarity=0.189 Sum_probs=57.7
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcc----hhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD----IVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~-g---~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aAD----ivl~~~~l~~i~~~i~ 372 (508)
.|...++.+.++ | ..|+++||+.||.+|++.+++||+|+++.+..+..|| +|...++-.++.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 688888877654 3 3689999999999999999999999999999999999 7877888889998886
No 75
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.86 E-value=5.4e-05 Score=72.02 Aligned_cols=123 Identities=17% Similarity=0.166 Sum_probs=82.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.|++.++++.|++.|+++.++|+.....+..+-+.+|+.... ..++..+... .....|+-
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~p~~ 143 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE-----------------HAKPDPEP 143 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC-----------------CCCCCcHH
Confidence 6799999999999999999999999999999888999985321 1111111100 11222333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEe--cC-c-hHHHHhhcchhccCCChhHHHHHH
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV--AD-A-TDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~--~~-~-~~~a~~aADivl~~~~l~~i~~~i 371 (508)
-..+++.++.....+++|||+.+|..+-+.|++- |++ +. . .+.....+|+++. ++..+...+
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 3445555554556799999999999999999983 333 32 2 2233456888774 577776654
No 76
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.82 E-value=7.6e-05 Score=73.90 Aligned_cols=126 Identities=13% Similarity=0.159 Sum_probs=82.1
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
.++.+++.++++.|++.|+++.++||.....+..+....|+.... ..++.+++.. .....|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 367899999999999999999999999998888888888874311 1111111000 011112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecC----chHHHHhhcchhccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~----~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
+--..+.+.+.-....|+||||+.||..+.+.|++ .+++.. ..+.....+|.++. ++..+..++.
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~~ 230 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGCA 230 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHHh
Confidence 21223444444345679999999999999999997 344432 23334457888884 4777765433
No 77
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.80 E-value=7.1e-05 Score=71.95 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=38.2
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3445567999999999999999999999999999999999974
No 78
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.79 E-value=7e-05 Score=70.98 Aligned_cols=122 Identities=15% Similarity=0.167 Sum_probs=79.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+.... ..++.++... .....|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC-----------------CCCCChH
Confidence 47899999999999999999999999999999999999985321 1111111100 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEe--cCc--hHHHHhhcchhccCCChhHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV--ADA--TDAARSAADIVLTEPGLNVIIT 369 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~--~~~--~~~a~~aADivl~~~~l~~i~~ 369 (508)
-=..+.+.++.....++++||+.+|..+.+.|++- |.+ |.. .+.....+|+++.+ +..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHHh
Confidence 22334444444456799999999999999999985 334 211 22233468888743 665543
No 79
>PRK08238 hypothetical protein; Validated
Probab=97.75 E-value=0.0001 Score=78.36 Aligned_cols=99 Identities=15% Similarity=0.175 Sum_probs=74.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
|+++++.+.++++++.|+++.++|+-+...+..+++.+|+.+. ++.++. ..++.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~-------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDG-------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCC-------------------ccccCCc
Confidence 4789999999999999999999999999999999999997221 111111 1135566
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDA 350 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~ 350 (508)
.|.+.++..... +.+.++||..||.++++.|+-.++++.+...
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l 170 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGV 170 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHH
Confidence 776654432222 2267899999999999999999999855433
No 80
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.70 E-value=0.00023 Score=67.95 Aligned_cols=38 Identities=21% Similarity=0.238 Sum_probs=35.4
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 230 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 230 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
+.+.++|+.|++.|++++++||.....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44889999999999999999999999999999999985
No 81
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.70 E-value=0.00019 Score=70.15 Aligned_cols=100 Identities=15% Similarity=0.128 Sum_probs=68.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+.....+..+-+.+|+..... ..++.+++.. ...-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 357899999999999999999999999999998888888854321 2222221110 1122333
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCCCChhhhhcCCee-EEe
Q 010523 307 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG-IAV 344 (508)
Q Consensus 307 ~K~~iV~~l~~~-g~~v~~vGDG~ND~~al~~AdvG-Ia~ 344 (508)
-=....+.+.-. ...|+||||..+|..+-+.|++- |++
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEE
Confidence 333444444432 45699999999999999999973 444
No 82
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.69 E-value=0.00016 Score=69.67 Aligned_cols=124 Identities=14% Similarity=0.152 Sum_probs=83.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+.... ..++.+++. ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTL-----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcC-----------------CCCCCCHH
Confidence 46899999999999999999999999988888888888874321 111111110 01223344
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEe--cCc--h-HHHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV--ADA--T-DAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~--~~~--~-~~a~~aADivl~~~~l~~i~~~i 371 (508)
-=..+++.++-....|+||||+.||..+-+.|++. |++ |.. . ......+|+++.+ +..+.+.+
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHHh
Confidence 34455666666677899999999999999999975 333 321 1 2233568888844 66665543
No 83
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.68 E-value=9.6e-05 Score=70.74 Aligned_cols=121 Identities=17% Similarity=0.222 Sum_probs=77.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+........+.+.+|+..-. ..++.++.. ......|+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 152 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKL-----------------PYSKPHPE 152 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccC-----------------CCCCCCHH
Confidence 56799999999999999999999999999999999999885321 111111100 01112232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeE-EecCc---hHHHHhhcchhccCCChhHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AVADA---TDAARSAADIVLTEPGLNVII 368 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGI-a~~~~---~~~a~~aADivl~~~~l~~i~ 368 (508)
-=..+.+.+.-....|+++||..||+.+.+.|++.. .+..+ .+.-...+|+++.+ +..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl~ 216 (222)
T PRK10826 153 VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTELT 216 (222)
T ss_pred HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHHh
Confidence 222233333333467999999999999999999854 33322 11222356777643 65554
No 84
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.62 E-value=0.00032 Score=69.25 Aligned_cols=140 Identities=9% Similarity=0.085 Sum_probs=84.3
Q ss_pred CCCcchHHHHHHHHh-CCCcEEEEcCCcHHHHHHHHHHhCCC--CCC----C--CCc----cccCCchh-------hhhh
Q 010523 227 PPIHDSAETIRRALS-LGLGVKMITGDQLAIAKETGRRLGMG--TNM----Y--PSS----ALSGQDRD-------ESIV 286 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~-~Gi~v~mlTGD~~~~a~~ia~~lgi~--~~~----~--~~~----~~~~~~~~-------~~~~ 286 (508)
.+-+++.++|++|++ .|+.++++||+....+..+...+++. ... . ... .+..+... +...
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999997 79999999999999988887766542 100 0 000 00000000 0000
Q ss_pred ---------------------cCC---hhHH----hhhc--------ceEeecChh--hHHHHHHHHhhc----CCEEEE
Q 010523 287 ---------------------ALP---VDEL----IEKA--------DGFAGVFPE--HKYEIVKHLQAR----NHICGM 324 (508)
Q Consensus 287 ---------------------~~~---~~~~----~~~~--------~v~a~~~P~--~K~~iV~~l~~~----g~~v~~ 324 (508)
..+ ...+ .... ..+.++.|. +|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000 0001 1010 012233443 677777766543 357999
Q ss_pred EcCCCCChhhhhcC----CeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 325 IGNGVNDAPALKKA----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 325 vGDG~ND~~al~~A----dvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
+||+.||.+||+.+ +.||+||++. ..|++.|.+ ...+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~--~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAG--VPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCC--HHHHHHHHH
Confidence 99999999999999 9999999875 457777754 555555443
No 85
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.59 E-value=0.00052 Score=67.70 Aligned_cols=96 Identities=14% Similarity=0.074 Sum_probs=64.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++-|++.++++.|++.|+++.++||.....+..+-+.+|+..-.. ..++.+++.. ...-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~~~-----------------~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDDVP-----------------AGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCcCC-----------------CCCCChH
Confidence 457899999999999999999999999988877777777643211 1222211100 1112233
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCCCChhhhhcCCe
Q 010523 307 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADI 340 (508)
Q Consensus 307 ~K~~iV~~l~~~-g~~v~~vGDG~ND~~al~~Adv 340 (508)
-=....+.+.-. ...|+||||+.+|..+-+.|++
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 223334444433 3579999999999999999997
No 86
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.56 E-value=0.00032 Score=66.92 Aligned_cols=125 Identities=18% Similarity=0.172 Sum_probs=80.9
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC-CCCCCccccCCchhhhhhcCChhHHhhhcceEeecC
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 304 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 304 (508)
.++.+|+.+.++.|++.|+++.++|+-....+..+.+.+|+.. +.+ ..++.+.+.. ...-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-~~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-DAVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-CEEEcCCcCC-----------------CCCCC
Confidence 3688999999999999999999999999999999999998852 211 1222221110 01122
Q ss_pred hhhHHHHHHHHhhc-CCEEEEEcCCCCChhhhhcCCeeE--EecCc--h--HHHHhhcchhccCCChhHHHHH
Q 010523 305 PEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGI--AVADA--T--DAARSAADIVLTEPGLNVIITA 370 (508)
Q Consensus 305 P~~K~~iV~~l~~~-g~~v~~vGDG~ND~~al~~AdvGI--a~~~~--~--~~a~~aADivl~~~~l~~i~~~ 370 (508)
|+-=....+.+.-. ...++||||+.+|..+-+.|++.. ++..+ + ......+|.++. ++..+...
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~~~l~~~ 218 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SVADLPAL 218 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CHHHHHHh
Confidence 33223333444333 367999999999999999999975 34322 1 122345777764 46655443
No 87
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.49 E-value=0.0011 Score=65.20 Aligned_cols=134 Identities=10% Similarity=0.056 Sum_probs=82.4
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC---C-ccccCCchhhhhhcCChhHHhhhcceEe
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP---S-SALSGQDRDESIVALPVDELIEKADGFA 301 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~v~a 301 (508)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+...... . ..+..+. .+...+ .+
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dG---vltG~~-~P--------- 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDG---VLKGFK-GP--------- 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCC---eEeCCC-CC---------
Confidence 35799999999999999999999999999999999999998422110 0 0011100 000000 00
Q ss_pred ecChhhHHHHHH-----HHh--hcCCEEEEEcCCCCChhhhhcC---CeeEEec--Cc-----hHHHHhhcchhccCCCh
Q 010523 302 GVFPEHKYEIVK-----HLQ--ARNHICGMIGNGVNDAPALKKA---DIGIAVA--DA-----TDAARSAADIVLTEPGL 364 (508)
Q Consensus 302 ~~~P~~K~~iV~-----~l~--~~g~~v~~vGDG~ND~~al~~A---dvGIa~~--~~-----~~~a~~aADivl~~~~l 364 (508)
-+....|.+.+. .++ .....|+++|||.||++|..-. .--+.+| +. -+.-.++=|||+.+|.-
T Consensus 187 ~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t 266 (277)
T TIGR01544 187 LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDET 266 (277)
T ss_pred cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCC
Confidence 011134554333 222 2346799999999999997654 2223333 32 22355778999998766
Q ss_pred hHHHHHHH
Q 010523 365 NVIITAVL 372 (508)
Q Consensus 365 ~~i~~~i~ 372 (508)
-.++..|.
T Consensus 267 ~~v~~~il 274 (277)
T TIGR01544 267 LEVANSIL 274 (277)
T ss_pred chHHHHHH
Confidence 55655543
No 88
>PRK11590 hypothetical protein; Provisional
Probab=97.48 E-value=0.00049 Score=65.42 Aligned_cols=105 Identities=12% Similarity=0.010 Sum_probs=74.1
Q ss_pred CCCcchHHHH-HHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC--CCCCCCccccCCchhhhhhcCChhHHhhhcceEeec
Q 010523 227 PPIHDSAETI-RRALSLGLGVKMITGDQLAIAKETGRRLGMG--TNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 303 (508)
Q Consensus 227 ~~r~~~~~~I-~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 303 (508)
.+.|++.+.| +.+++.|++++++|+-....+..+++.+|+. .+.. +-+.+.... .+ ..-..|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i------~t~l~~~~t--------g~-~~g~~c 159 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI------ASQMQRRYG--------GW-VLTLRC 159 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE------EEEEEEEEc--------cE-ECCccC
Confidence 3488999999 5788899999999999999999999999861 1111 100000000 00 011236
Q ss_pred ChhhHHHHHHHH-hhcCCEEEEEcCCCCChhhhhcCCeeEEecC
Q 010523 304 FPEHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVAD 346 (508)
Q Consensus 304 ~P~~K~~iV~~l-~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~ 346 (508)
.-++|..-++.. ......+.+-||+.||.|||+.|+.++++..
T Consensus 160 ~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 160 LGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred CChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 678888766644 3344567789999999999999999999974
No 89
>PLN02382 probable sucrose-phosphatase
Probab=97.48 E-value=0.00014 Score=76.26 Aligned_cols=72 Identities=25% Similarity=0.237 Sum_probs=54.7
Q ss_pred eecChh--hHHHHHHHHhhc-------CCEEEEEcCCCCChhhhhcCC-eeEEecCchHHHHhhc--------chhc-cC
Q 010523 301 AGVFPE--HKYEIVKHLQAR-------NHICGMIGNGVNDAPALKKAD-IGIAVADATDAARSAA--------DIVL-TE 361 (508)
Q Consensus 301 a~~~P~--~K~~iV~~l~~~-------g~~v~~vGDG~ND~~al~~Ad-vGIa~~~~~~~a~~aA--------Divl-~~ 361 (508)
..+.|. .|..-++.|.++ ...|+++||+.||.+||+.++ .||+|+|+.+..++.+ +++. .+
T Consensus 167 ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~ 246 (413)
T PLN02382 167 LDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATE 246 (413)
T ss_pred EEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCC
Confidence 344554 488877777554 347899999999999999999 6999999999888753 3332 35
Q ss_pred CChhHHHHHHH
Q 010523 362 PGLNVIITAVL 372 (508)
Q Consensus 362 ~~l~~i~~~i~ 372 (508)
++-++|.++|.
T Consensus 247 ~~~~GI~~al~ 257 (413)
T PLN02382 247 RCAAGIIQAIG 257 (413)
T ss_pred CCccHHHHHHH
Confidence 56788888876
No 90
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.48 E-value=0.00054 Score=66.85 Aligned_cols=116 Identities=12% Similarity=0.153 Sum_probs=79.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+-....+...-+.+|+.... ..++.+++.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 46789999999999999999999999999999999999985321 1122221110 1122333
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEec--Cc-hHHHHhhcchhccC
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA--DA-TDAARSAADIVLTE 361 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~--~~-~~~a~~aADivl~~ 361 (508)
--....+.++-....++||||..+|..+-+.|++- |++. .. .+.....+|+++.+
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 33445555555567799999999999999999974 3343 22 22223468888755
No 91
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.45 E-value=0.0006 Score=67.07 Aligned_cols=42 Identities=7% Similarity=0.018 Sum_probs=38.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 268 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 268 (508)
..-+.+.++|++|++.||.|++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 355678999999999999999999999999999999999853
No 92
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.44 E-value=0.001 Score=65.88 Aligned_cols=121 Identities=13% Similarity=0.124 Sum_probs=80.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++-|++.++++.|++.|+++.++|+.....+...-+.+|+.... . .++.++.. . ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~~~~------------------~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAGTPI------------------L--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEecCCC------------------C--CCHH
Confidence 46789999999999999999999999999999999999985321 1 11111100 0 0111
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecC--c--hHHHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD--A--TDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~--~--~~~a~~aADivl~~~~l~~i~~~i 371 (508)
-=..+++.++-....|+||||+.+|..+-+.|++- |++.. . .+.....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 11222333333456799999999999999999974 33332 1 223345689888 4477777654
No 93
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.33 E-value=0.0026 Score=67.75 Aligned_cols=174 Identities=21% Similarity=0.254 Sum_probs=116.4
Q ss_pred cEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc------------------c
Q 010523 216 WQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL------------------S 277 (508)
Q Consensus 216 l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~------------------~ 277 (508)
-.|.|++.+.-+++++....|+.|-++-|+.+-.+-.+....+-+|.++||......-..+ .
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 3699999999999999999999999999999999999999999999999984311100000 0
Q ss_pred C---------------Cchhhhhhc----------------------------CC-----hhHHhh-------hcceEee
Q 010523 278 G---------------QDRDESIVA----------------------------LP-----VDELIE-------KADGFAG 302 (508)
Q Consensus 278 ~---------------~~~~~~~~~----------------------------~~-----~~~~~~-------~~~v~a~ 302 (508)
+ +...+.+.. ++ +...+. -...|.+
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 0 000000000 00 000011 1125889
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCCCC--hhhhhcCCeeEEecCc-------------hHH-HHhhcc----------
Q 010523 303 VFPEHKYEIVKHLQARNHICGMIGNGVND--APALKKADIGIAVADA-------------TDA-ARSAAD---------- 356 (508)
Q Consensus 303 ~~P~~K~~iV~~l~~~g~~v~~vGDG~ND--~~al~~AdvGIa~~~~-------------~~~-a~~aAD---------- 356 (508)
++|+.-.++|+.+|+.|.+++.+|...|- .-.+-+||++|++..- +.. ..++.|
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 99999999999999999999999998874 3456789999998631 111 111222
Q ss_pred -------hhccCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 357 -------IVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 389 (508)
Q Consensus 357 -------ivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~ 389 (508)
+-+....+-.+.++|+-+|.-..-+|+.++|.+
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 222222344567778888887788888777765
No 94
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.30 E-value=0.00092 Score=65.72 Aligned_cols=121 Identities=18% Similarity=0.114 Sum_probs=80.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.++++.|++.|+++.++|+.....+..+-+.+|+..- -..++.+++.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCC-----------------CCCCCHH
Confidence 4688999999999999999999999999999999898888532 11222221110 1122233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEec-CchHHHHhhcchhccCCChhHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA-DATDAARSAADIVLTEPGLNVII 368 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~-~~~~~a~~aADivl~~~~l~~i~ 368 (508)
-=...++.++-....|+||||..+|+.+-+.|++- |++. ..+......+|+++.+ +..+.
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~--~~el~ 231 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR--LDDLS 231 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC--HHHHH
Confidence 22344555555566799999999999999999983 3443 2222222357877644 55443
No 95
>PRK06769 hypothetical protein; Validated
Probab=97.29 E-value=0.00082 Score=61.82 Aligned_cols=100 Identities=12% Similarity=0.066 Sum_probs=60.7
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH--------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcce
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLA--------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG 299 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~--------~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 299 (508)
+-|++.+++++|++.|+++.++|+.... .....-+..|+..- +......+++. .
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI-YLCPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE-EECcCCCCCCC-----------------C
Confidence 6799999999999999999999987631 12222334454210 00000000000 0
Q ss_pred EeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEec
Q 010523 300 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA 345 (508)
Q Consensus 300 ~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~ 345 (508)
...-.|+-=..+++.+....+.|+||||..+|..+-+.|++- |++.
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~ 137 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVR 137 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 112233333455555555556799999999999999999974 4454
No 96
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.25 E-value=0.001 Score=63.19 Aligned_cols=107 Identities=11% Similarity=0.023 Sum_probs=72.9
Q ss_pred CCCcchHHHHH-HHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 227 PPIHDSAETIR-RALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~-~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
.++|++.++|+ .+++.|++++++|+-....+..+++..++... ..++ +-+.+.. .. .+ ..-..|.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~-~g-------g~-~~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERG-NG-------GW-VLPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEe-CC-------ce-EcCccCCC
Confidence 36899999995 78889999999999999999999988655210 0011 0000000 00 00 01134667
Q ss_pred hhHHHHHHHH-hhcCCEEEEEcCCCCChhhhhcCCeeEEecC
Q 010523 306 EHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVAD 346 (508)
Q Consensus 306 ~~K~~iV~~l-~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~ 346 (508)
++|..-++.. ......+.+-||+.||.|||+.||.++++..
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8888766644 3233456789999999999999999999963
No 97
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.21 E-value=0.0013 Score=70.31 Aligned_cols=124 Identities=11% Similarity=0.081 Sum_probs=82.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.||+.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+++.. ....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 67899999999999999999999999999999999999884321 1122211110 011232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecC--chHHHHhhcchhccCCChhHHHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD--ATDAARSAADIVLTEPGLNVIITAVLIS 374 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~--~~~~a~~aADivl~~~~l~~i~~~i~~~ 374 (508)
--....+.+ ....|+++||..+|+.+-+.|++ .|++.. ..+.....+|+++. ++..+...+...
T Consensus 390 ~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~~~ 456 (459)
T PRK06698 390 LVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILSTV 456 (459)
T ss_pred HHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHHHH
Confidence 112222222 24579999999999999999997 455532 22222345788874 477777766544
No 98
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.17 E-value=0.00065 Score=63.69 Aligned_cols=94 Identities=19% Similarity=0.137 Sum_probs=66.7
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecC
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 304 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 304 (508)
.+++.+++.++++.|++.|+++.++||.....+..+-+.+|+..-. ..++.+++ +.....
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~~------------------~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWMED------------------CPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeecC------------------CCCCcC
Confidence 3446677899999999999999999999999999999999985321 11111111 111334
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcC
Q 010523 305 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 338 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~A 338 (508)
|+--..+++.++-....|+||||+.+|+.+-+.|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 4444555666665667899999999999876654
No 99
>PRK11587 putative phosphatase; Provisional
Probab=97.16 E-value=0.0014 Score=62.45 Aligned_cols=115 Identities=13% Similarity=0.137 Sum_probs=73.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+.....+...-+..|+.. + ..++.+++. ....-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~--~-~~i~~~~~~-----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA--P-EVFVTAERV-----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC--c-cEEEEHHHh-----------------cCCCCCcH
Confidence 468999999999999999999999988776666656666631 1 111111100 01122233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCch-HHHHhhcchhccC
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT-DAARSAADIVLTE 361 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~~-~~a~~aADivl~~ 361 (508)
-=....+.+.-....++||||..+|+.+-+.|++. |++..+. ......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 33344455555567899999999999999999984 6665332 2223456776643
No 100
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.11 E-value=0.0023 Score=69.86 Aligned_cols=40 Identities=10% Similarity=0.133 Sum_probs=36.0
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
.-+.+.++|++|+++|++++++||.....+..+.+++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3357799999999999999999999999999999999974
No 101
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.05 E-value=0.0018 Score=62.47 Aligned_cols=93 Identities=19% Similarity=0.240 Sum_probs=64.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc----HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEee
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 302 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~----~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 302 (508)
.|.+++.+.++.+++.|+++.++||.. ..++..+.+..|++...+...++.++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~---------------------- 171 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK---------------------- 171 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC----------------------
Confidence 367889999999999999999999964 568888888899952211122222211
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEec
Q 010523 303 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVA 345 (508)
Q Consensus 303 ~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~ 345 (508)
..-.+|...+ ++.+ .++|+||..+|..+-+.|++ +|.+.
T Consensus 172 ~~K~~K~~~l---~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v~ 211 (237)
T PRK11009 172 PGQYTKTQWL---KKKN-IRIFYGDSDNDITAAREAGARGIRIL 211 (237)
T ss_pred CCCCCHHHHH---HhcC-CeEEEcCCHHHHHHHHHcCCcEEEEe
Confidence 0113344433 3444 48999999999999999998 45553
No 102
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.05 E-value=0.0013 Score=62.59 Aligned_cols=100 Identities=17% Similarity=0.245 Sum_probs=67.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|++++++|+-....+....+.+|+.... ..++.+++. ....-.|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEEE-----------------GVEKPHPK 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEeccC-----------------CCCCCCHH
Confidence 46889999999999999999999999888888888888874211 111111110 01112222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCe-eEEec
Q 010523 307 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADI-GIAVA 345 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~Adv-GIa~~ 345 (508)
-=..+.+.+.-....++||||.. +|+.+-+.|++ .|.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 22233444444456799999998 99999999997 45555
No 103
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.98 E-value=0.0046 Score=69.86 Aligned_cols=61 Identities=18% Similarity=0.183 Sum_probs=46.7
Q ss_pred hhHHHHHHHHhhc--CCEEEEEcCCCCChhhhhcC---CeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQAR--NHICGMIGNGVNDAPALKKA---DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~~--g~~v~~vGDG~ND~~al~~A---dvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
-+|...++.+.+. ...++++||+.||.+||+.+ +.+|+||++ +.+|++.+.++ ..+...+.
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHHH
Confidence 3688888887764 35799999999999999986 588888874 46788988753 55555544
No 104
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.98 E-value=0.0018 Score=61.02 Aligned_cols=39 Identities=28% Similarity=0.342 Sum_probs=35.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhC
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 265 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lg 265 (508)
++.+.+.++|++|++.|++++++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999999888754
No 105
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.97 E-value=0.0024 Score=65.67 Aligned_cols=120 Identities=18% Similarity=0.165 Sum_probs=80.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+|+.++++.|++.|+++.++|+.....+..+-+.+||.... ..++.+++.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999999999984311 1111111110 0112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCchHHH-HhhcchhccCCChhHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATDAA-RSAADIVLTEPGLNVI 367 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~~~~a-~~aADivl~~~~l~~i 367 (508)
-=...++.++-....|+||||..+|+.|-+.|++- |++..+.... ...+|+++.+ +..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECC--HHHH
Confidence 33445555655677899999999999999999984 4444322221 2347877744 5544
No 106
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.96 E-value=0.0023 Score=64.17 Aligned_cols=108 Identities=13% Similarity=0.077 Sum_probs=75.6
Q ss_pred ccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEee
Q 010523 223 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 302 (508)
Q Consensus 223 ~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 302 (508)
...+++.+++.++++.|++.|+++.++||.....+..+.+.+|+....+... . +.+.. ...++. ..-.+
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i-~-~~~~~--------~~~~~~-~~~~k 251 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDL-I-GRPPD--------MHFQRE-QGDKR 251 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhh-h-CCcch--------hhhccc-CCCCC
Confidence 3678899999999999999999999999999999999999988853111111 1 11100 000000 00123
Q ss_pred cChhhHHHHHHHHhh-cCCEEEEEcCCCCChhhhhcCCee
Q 010523 303 VFPEHKYEIVKHLQA-RNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 303 ~~P~~K~~iV~~l~~-~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
-.|+-+...++.+.. ....++|+||..+|+.+-+.|++-
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~ 291 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLE 291 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCe
Confidence 456667777766544 347899999999999999999985
No 107
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.95 E-value=0.0021 Score=60.14 Aligned_cols=96 Identities=16% Similarity=0.161 Sum_probs=65.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.+++++|++.|+++.++|+-+........+.+|+... +. .++..++.. .....|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~-fd-~i~~s~~~~-----------------~~KP~~~ 152 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP-FD-AVLSADAVR-----------------AYKPAPQ 152 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh-hh-eeEehhhcC-----------------CCCCCHH
Confidence 4679999999999999999999999998888888888887421 11 111111100 1111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
-=..+.+.+.-....+++|||+.+|+.+-+.+++-
T Consensus 153 ~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 153 VYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 11334444544566799999999999999999874
No 108
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.93 E-value=0.0043 Score=57.96 Aligned_cols=144 Identities=20% Similarity=0.299 Sum_probs=94.0
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc-------cCCchhhhhh------cCChhHHh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL-------SGQDRDESIV------ALPVDELI 294 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~-------~~~~~~~~~~------~~~~~~~~ 294 (508)
+-|++.++.+.|+.. ...+++|---..-+..+|..+|++.......-+ -.....+.+. ..+-+++.
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 468999999998876 455566666777889999999995422211111 1111111111 11222333
Q ss_pred hhc-ceEeecChhhHHHHHHHHhhc------------------CCEEEEEcCCCCChhhhhcCC-e-eEEec-CchHHHH
Q 010523 295 EKA-DGFAGVFPEHKYEIVKHLQAR------------------NHICGMIGNGVNDAPALKKAD-I-GIAVA-DATDAAR 352 (508)
Q Consensus 295 ~~~-~v~a~~~P~~K~~iV~~l~~~------------------g~~v~~vGDG~ND~~al~~Ad-v-GIa~~-~~~~~a~ 352 (508)
++. ++|.+..|..-.+|++.++.- ....+++||++.|+.||+.+. - |+|++ ||.+-|-
T Consensus 163 e~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal 242 (315)
T COG4030 163 EKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYAL 242 (315)
T ss_pred HHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcccc
Confidence 332 367787777655555544432 223689999999999999885 2 47777 7878788
Q ss_pred hhcchhccCCChhHHHHHHH
Q 010523 353 SAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 353 ~aADivl~~~~l~~i~~~i~ 372 (508)
..||+.+..++...+...|.
T Consensus 243 ~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 243 KEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccceEEeccchhhhhHHHH
Confidence 88999999999998888776
No 109
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.89 E-value=0.0017 Score=62.62 Aligned_cols=91 Identities=21% Similarity=0.245 Sum_probs=62.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCC----cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeec
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGD----QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 303 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD----~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 303 (508)
+.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+... + ..++.++... ..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-f-~~i~~~d~~~-------------------~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-N-PVIFAGDKPG-------------------QY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-e-eEEECCCCCC-------------------CC
Confidence 4555999999999999999999998 66789999999999531 1 1222221110 01
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEe
Q 010523 304 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAV 344 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~ 344 (508)
.| +|. ..+++.+ .++|+||..||..+-+.|++ +|++
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 12 232 2344444 48999999999999999987 3444
No 110
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.88 E-value=0.0024 Score=63.65 Aligned_cols=117 Identities=18% Similarity=0.140 Sum_probs=71.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCC-ccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-SALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
++.|++.+.++.|++.|+++.++|+-.......+-...+... .... .++.+++. ......|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~-----------------~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDV-----------------PKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEecccc-----------------CCCCCCH
Confidence 468899999999999999999999988877766555443211 0000 01111100 0112223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCc--hHHHHhhcchhccC
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA--TDAARSAADIVLTE 361 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~--~~~a~~aADivl~~ 361 (508)
+-=..+.+.+.-....++||||+.+|+.+-+.|++. |++..+ .......+|+++.+
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 333444555555566799999999999999999985 334322 11112357777743
No 111
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.85 E-value=0.0052 Score=56.80 Aligned_cols=127 Identities=20% Similarity=0.152 Sum_probs=71.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH---------------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhH
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 292 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~---------------~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (508)
+.|++.+++++|++.|+++.++|..... ....+-+..|+. +...+.......+.
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~---f~~i~~~~~~~~~~-------- 98 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR---LDGIYYCPHHPEDG-------- 98 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc---cceEEECCCCCCCC--------
Confidence 5799999999999999999999987621 111222334441 11100000000000
Q ss_pred HhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCch--H-HHHhhc--chhccCCChhH
Q 010523 293 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT--D-AARSAA--DIVLTEPGLNV 366 (508)
Q Consensus 293 ~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~~--~-~a~~aA--Divl~~~~l~~ 366 (508)
.....-.|+--..+++.+.-....++||||..+|+.+-+.|++. |.+..+. . .....+ |+++ +++..
T Consensus 99 -----~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~e 171 (181)
T PRK08942 99 -----CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLAD 171 (181)
T ss_pred -----CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHH
Confidence 00112233433445555555567899999999999999999974 3343221 1 122234 7776 34666
Q ss_pred HHHHHH
Q 010523 367 IITAVL 372 (508)
Q Consensus 367 i~~~i~ 372 (508)
+.+.+.
T Consensus 172 l~~~l~ 177 (181)
T PRK08942 172 LPQALK 177 (181)
T ss_pred HHHHHH
Confidence 665543
No 112
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.83 E-value=0.0019 Score=59.62 Aligned_cols=94 Identities=12% Similarity=0.068 Sum_probs=59.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+... +....+.+|+.... ..++.+.+. ......|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEI-----------------KKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhc-----------------CCCCCChH
Confidence 4679999999999999999999997532 34566777774221 111111100 01112222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
-=....+.+.-....|+||||..+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 22233344433345699999999999999999974
No 113
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.82 E-value=0.0026 Score=61.06 Aligned_cols=101 Identities=11% Similarity=0.029 Sum_probs=66.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.++++.|++.|+++.++|+.....+...-+..|+... + ..++.+++.. ...-.|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-d~iv~s~~~~-----------------~~KP~p~ 153 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH-L-DLLLSTHTFG-----------------YPKEDQR 153 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH-C-CEEEEeeeCC-----------------CCCCCHH
Confidence 5689999999999999999999999888888777777777421 1 1111111000 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee--EEecC
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVAD 346 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG--Ia~~~ 346 (508)
-=....+.+.-....|+||||..+|+.+-+.|++. +++.+
T Consensus 154 ~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 154 LWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 11223344444456799999999999999999995 44554
No 114
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.74 E-value=0.0011 Score=59.89 Aligned_cols=96 Identities=18% Similarity=0.233 Sum_probs=68.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++.|++++++|+..........+.+|+... +. .++..++.. .....|+
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~-f~-~i~~~~~~~-----------------~~Kp~~~ 137 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY-FD-EIISSDDVG-----------------SRKPDPD 137 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG-CS-EEEEGGGSS-----------------SSTTSHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc-cc-cccccchhh-----------------hhhhHHH
Confidence 4688999999999999999999999999999999999998521 11 111111100 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
-=..+++.++-....+++|||+..|+.+-+.|++-
T Consensus 138 ~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 138 AYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 22445566655677899999999999999998874
No 115
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.68 E-value=0.0037 Score=59.46 Aligned_cols=121 Identities=10% Similarity=0.070 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++. +++.++|+-....+..+-+.+|+..-. ..++.+.+.. ...-.|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDAG-----------------IQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCccC-----------------CCCCCHH
Confidence 4678999999999999 999999999988888888888885321 1111111000 0111222
Q ss_pred hHHHHHHHH-hhcCCEEEEEcCCC-CChhhhhcCCe-eEEecC--chHHHHhhcchhccCCChhHHHH
Q 010523 307 HKYEIVKHL-QARNHICGMIGNGV-NDAPALKKADI-GIAVAD--ATDAARSAADIVLTEPGLNVIIT 369 (508)
Q Consensus 307 ~K~~iV~~l-~~~g~~v~~vGDG~-ND~~al~~Adv-GIa~~~--~~~~a~~aADivl~~~~l~~i~~ 369 (508)
-=...++.+ .-....+++|||.. +|..+-+.+++ +|.+.. .+......+|.++. ++..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHHh
Confidence 123344444 43456799999998 89999999997 344432 22112234555653 3555543
No 116
>PTZ00174 phosphomannomutase; Provisional
Probab=96.66 E-value=0.0024 Score=62.32 Aligned_cols=60 Identities=25% Similarity=0.358 Sum_probs=50.2
Q ss_pred EeecCh--hhHHHHHHHHhhcCCEEEEEcC----CCCChhhhhcC-CeeEEecCchHHHHhhcchhc
Q 010523 300 FAGVFP--EHKYEIVKHLQARNHICGMIGN----GVNDAPALKKA-DIGIAVADATDAARSAADIVL 359 (508)
Q Consensus 300 ~a~~~P--~~K~~iV~~l~~~g~~v~~vGD----G~ND~~al~~A-dvGIa~~~~~~~a~~aADivl 359 (508)
+.++.| -+|..-++.|.++...|+++|| |.||.+||+.| -.|++++++.+..+..+.+++
T Consensus 179 ~leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 345555 4799999999887889999999 99999999987 578888899999998887664
No 117
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.62 E-value=0.0059 Score=53.15 Aligned_cols=92 Identities=14% Similarity=0.147 Sum_probs=63.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc--------HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQ--------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 298 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~--------~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (508)
++.+++.++++.|++.|+++.++|+.. ......+.+.+|+.... ....+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-------------------- 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-------------------- 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC--------------------
Confidence 578999999999999999999999988 77777888888874210 00000
Q ss_pred eEeecChhhHHHHHHHHh-hcCCEEEEEcC-CCCChhhhhcCCee
Q 010523 299 GFAGVFPEHKYEIVKHLQ-ARNHICGMIGN-GVNDAPALKKADIG 341 (508)
Q Consensus 299 v~a~~~P~~K~~iV~~l~-~~g~~v~~vGD-G~ND~~al~~AdvG 341 (508)
....-.|+-=..+++.++ -....++|||| ..+|..+-+.+++-
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 001112222234455552 45578999999 59999999998873
No 118
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.61 E-value=0.0046 Score=55.93 Aligned_cols=108 Identities=14% Similarity=0.022 Sum_probs=70.2
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcce--EeecCh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG--FAGVFP 305 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~a~~~P 305 (508)
++|+-++.++.+++.+++++++|+........+-..++=...++...+.+.+..- ..-..+..+ .....-
T Consensus 74 Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~i--------h~dg~h~i~~~~ds~fG 145 (220)
T COG4359 74 IDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYI--------HIDGQHSIKYTDDSQFG 145 (220)
T ss_pred cCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceE--------cCCCceeeecCCccccC
Confidence 6899999999999999999999998877666666655411111111111110000 000000000 112233
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEE
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 343 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa 343 (508)
.+|...|+.+.+....+.|+|||+.|.+|-+.+|+=.|
T Consensus 146 ~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 146 HDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 57999999999999999999999999999888777554
No 119
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.57 E-value=0.0064 Score=55.72 Aligned_cols=94 Identities=15% Similarity=0.180 Sum_probs=62.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+... + ..++.+++. ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~-f-~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL-F-DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH-C-CEEEEcCCC-----------------CCCCCCHH
Confidence 568999999999999999999999988777 555555777421 1 111111100 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI 340 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv 340 (508)
-=..+.+.+......++++||...|+.+-+.+++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 3334445555556789999999999999998887
No 120
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.53 E-value=0.0034 Score=57.81 Aligned_cols=92 Identities=12% Similarity=0.166 Sum_probs=59.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+. ..+..+-+.+|+..-. ..++.++. .....|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~-------------------~~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE-------------------VKEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh-------------------CCCCCCC
Confidence 57899999999999999999999987 5566677777774211 11111100 0011222
Q ss_pred hH--HHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee
Q 010523 307 HK--YEIVKHLQARNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 307 ~K--~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
.. ..+.+.+......+++|||+.+|+.+-+.|++.
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 11 223333333346799999999999999999874
No 121
>PLN02940 riboflavin kinase
Probab=96.50 E-value=0.0051 Score=63.98 Aligned_cols=116 Identities=20% Similarity=0.203 Sum_probs=73.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHH-HhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR-RLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~-~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
++.+++.++++.|++.|+++.++|+.....+...-. ..|+.... ..++.+++. ....-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 357999999999999999999999998887776554 56663211 111111110 0112223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCc--hHHHHhhcchhccC
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA--TDAARSAADIVLTE 361 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~--~~~a~~aADivl~~ 361 (508)
+-=..+++.+.-....|+||||+.+|+.+-+.|++. |++..+ .......+|.++.+
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCC
Confidence 322344455554567899999999999999999985 445432 22233446666533
No 122
>PRK09449 dUMP phosphatase; Provisional
Probab=96.30 E-value=0.01 Score=56.57 Aligned_cols=123 Identities=12% Similarity=0.094 Sum_probs=74.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|+ .|+++.++|+.....+...-+.+|+.... . .++.+++. ....-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f-d-~v~~~~~~-----------------~~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF-D-LLVISEQV-----------------GVAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc-C-EEEEECcc-----------------CCCCCCHH
Confidence 36799999999999 68999999998888888777778874211 1 11111100 00111222
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCC-CChhhhhcCCee-EEecC-chH-HHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQAR-NHICGMIGNGV-NDAPALKKADIG-IAVAD-ATD-AARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~-g~~v~~vGDG~-ND~~al~~AdvG-Ia~~~-~~~-~a~~aADivl~~~~l~~i~~~i 371 (508)
-=..+++.+.-. ...|++|||.. +|+.+-+.|++- |.+.. +.. .....+|+++. ++..+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 222334444322 35799999998 799999999984 44442 211 11124677763 366665543
No 123
>PLN02811 hydrolase
Probab=96.27 E-value=0.015 Score=55.60 Aligned_cols=118 Identities=15% Similarity=0.185 Sum_probs=66.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHH-HHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKE-TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~-ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
++.|++.++|+.|++.|+++.++||-....... ..+..++.. .+ ..++.+++.+ .....-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~f-~~i~~~~~~~---------------~~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-LM-HHVVTGDDPE---------------VKQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-hC-CEEEECChhh---------------ccCCCCCc
Confidence 467999999999999999999999987643322 222223311 00 1111111000 00011122
Q ss_pred hhHHHHHHHHh---hcCCEEEEEcCCCCChhhhhcCCee-EEecCc--hHHHHhhcchhccC
Q 010523 306 EHKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIG-IAVADA--TDAARSAADIVLTE 361 (508)
Q Consensus 306 ~~K~~iV~~l~---~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~--~~~a~~aADivl~~ 361 (508)
+-=...++.+. -....|+||||...|+.+-+.|++- |.+..+ +......+|+++.+
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~ 202 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSS 202 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcC
Confidence 22233444443 3346799999999999999999984 444322 21122356777644
No 124
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.25 E-value=0.019 Score=52.60 Aligned_cols=114 Identities=11% Similarity=0.124 Sum_probs=73.8
Q ss_pred HHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCc-HHHHHHHHHHhCCC
Q 010523 189 FAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQ-LAIAKETGRRLGMG 267 (508)
Q Consensus 189 ~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~-~~~a~~ia~~lgi~ 267 (508)
+.+.|.+.+.+-... ++. ..=...+-+++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~--~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLV--YPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------ccc--cCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 445788888776543 111 00123567899999999999999999999988 57777777777763
Q ss_pred CCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCe-eEEec
Q 010523 268 TNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADI-GIAVA 345 (508)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~Adv-GIa~~ 345 (508)
.. .+ ...-.|+-=..+.+.+......++||||.. .|..+-+.|++ +|.+.
T Consensus 85 ~~-------~~---------------------~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~ 136 (170)
T TIGR01668 85 VL-------PH---------------------AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVE 136 (170)
T ss_pred EE-------cC---------------------CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEc
Confidence 10 00 011122211223333333456799999998 79999999998 45454
No 125
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.21 E-value=0.031 Score=50.47 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=65.4
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHH---HHHHHh---C--CCCCCCCCccccCCchhhhhhcCChhHHhhh
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSSALSGQDRDESIVALPVDELIEK 296 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~---~ia~~l---g--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
+|...+++.++++++++.|++++++||.....+. .....+ | ++. . ..+......-.... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g-~li~~~g~~~~~~~---------~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--G-PVLLSPDRLFAALH---------R 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--c-eEEEcCCcchhhhh---------c
Confidence 4677899999999999999999999999987774 444442 2 321 0 11111111100000 0
Q ss_pred cceEeecChh-hHHHHHHHHhh-----cCCEEEEEcCCCCChhhhhcCCee
Q 010523 297 ADGFAGVFPE-HKYEIVKHLQA-----RNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 297 ~~v~a~~~P~-~K~~iV~~l~~-----~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
.+.. ..|+ .|...++.+.+ ....++.+|++.+|+.+.++++|-
T Consensus 93 -e~i~-~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVIS-KKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -cccc-CCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 1111 2233 47777777766 346778899999999999887764
No 126
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.12 E-value=0.0084 Score=53.46 Aligned_cols=99 Identities=15% Similarity=0.145 Sum_probs=59.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 291 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~---------------~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
++.|++.++++.|++.|+++.++|.... ..+..+.+.+|+.... .........+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~~~~~~~------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG---VLFCPHHPADN------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE---EEECCCCCCCC-------
Confidence 3689999999999999999999998762 3455566777774110 00000000000
Q ss_pred HHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee
Q 010523 292 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 292 ~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
.....-.|+-=..+++.+.-....|+||||...|+.+-+.+++-
T Consensus 97 ------~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 ------CSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 00011111111233333443456799999999999999998874
No 127
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.11 E-value=0.024 Score=52.04 Aligned_cols=112 Identities=8% Similarity=-0.036 Sum_probs=70.9
Q ss_pred EEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCC-cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh
Q 010523 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 295 (508)
Q Consensus 217 ~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD-~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
.......-.-++.|++.++++.|++.|+++.++|+- ....+..+-..+|+...- . ..++.....
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~--------~-------~~~~~~~Fd 99 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAG--------K-------TVPMHSLFD 99 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCC--------C-------cccHHHhce
Confidence 345555556678899999999999999999999976 888888888888874100 0 000000000
Q ss_pred hcceEeecChhhH--HHHHHHHhhc------CCEEEEEcCCCCChhhhhcCCeeEEe
Q 010523 296 KADGFAGVFPEHK--YEIVKHLQAR------NHICGMIGNGVNDAPALKKADIGIAV 344 (508)
Q Consensus 296 ~~~v~a~~~P~~K--~~iV~~l~~~------g~~v~~vGDG~ND~~al~~AdvGIa~ 344 (508)
..+.+.-.+..| ..+.+.+.+. ...|+||||...|+.+-+.|++-...
T Consensus 100 -~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 100 -DRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred -eeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 011111111112 2345555432 45799999999999999999985443
No 128
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.09 E-value=0.0082 Score=54.49 Aligned_cols=99 Identities=11% Similarity=0.039 Sum_probs=59.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc---------------HHHHHHHHHHhCCCCCCCCCcccc----CCchhhhhhc
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQ---------------LAIAKETGRRLGMGTNMYPSSALS----GQDRDESIVA 287 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~---------------~~~a~~ia~~lgi~~~~~~~~~~~----~~~~~~~~~~ 287 (508)
++-|++.+++++|++.|+++.++|.-. ...+..+...+|+. +...++. .++.
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~------ 99 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII---FDDVLICPHFPDDNC------ 99 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc---eeEEEECCCCCCCCC------
Confidence 356899999999999999999999742 34455666777773 1111111 0000
Q ss_pred CChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEec
Q 010523 288 LPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA 345 (508)
Q Consensus 288 ~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~ 345 (508)
-+..-.|+-=..+++.+......++||||+.+|..+-+.+++. |.+.
T Consensus 100 -----------~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~ 147 (161)
T TIGR01261 100 -----------DCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYD 147 (161)
T ss_pred -----------CCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEC
Confidence 0011111111222333332345699999999999999999985 4443
No 129
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.01 E-value=0.0076 Score=58.78 Aligned_cols=68 Identities=19% Similarity=0.186 Sum_probs=47.4
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHH-----HHhhc---c-hhccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDA-----ARSAA---D-IVLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~-----a~~aA---D-ivl~~~~l~~i~~~i~ 372 (508)
..|...|+.|+++ ...|+++||+.||.+||..++-||.++|+.+. ..... . ++-..+.-.+|++++.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4699999988876 24688899999999999999999999998776 22222 2 3445566777887776
Q ss_pred H
Q 010523 373 I 373 (508)
Q Consensus 373 ~ 373 (508)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 3
No 130
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.99 E-value=0.01 Score=53.01 Aligned_cols=90 Identities=20% Similarity=0.235 Sum_probs=57.3
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
..+++.+.++.|++.|+++.++|+-....+....+.. +.. .+. .++..+ ++.....|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~-~f~-~i~~~~------------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGD-YFD-LILGSD------------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHh-cCc-EEEecC------------------CCCCCcCHHH
Confidence 3478999999999999999999999988888777664 321 111 111100 0111122222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCC
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKAD 339 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Ad 339 (508)
=..+.+.+.-.. .|++|||..+|..+-+.|+
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 233334444345 7999999999998877764
No 131
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.94 E-value=0.021 Score=52.52 Aligned_cols=128 Identities=15% Similarity=0.124 Sum_probs=65.9
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH---------------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhH
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 292 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~---------------~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (508)
+.|++.++|+.|++.|+++.++|.-... ....+-...|+.- ...........+ .. .+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~i~~~~~~~~~-~~--~~~- 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDL---DGIYYCPHHPEG-VE--EFR- 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCc---cEEEECCCCCcc-cc--ccc-
Confidence 4689999999999999999999976631 1112222333320 000000000000 00 000
Q ss_pred HhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee--EEecCch---HHHHhhcchhccCCChhHH
Q 010523 293 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVADAT---DAARSAADIVLTEPGLNVI 367 (508)
Q Consensus 293 ~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG--Ia~~~~~---~~a~~aADivl~~~~l~~i 367 (508)
....+..-.|+-=....+.+.-....++||||..+|+.+-+.|++. |.+..+. ......+|+++.+ +..+
T Consensus 100 ---~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~--~~el 174 (176)
T TIGR00213 100 ---QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNS--LADL 174 (176)
T ss_pred ---CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEecc--HHHh
Confidence 0000111122222333344444456799999999999999999984 3443221 1122347888743 5443
No 132
>PLN02580 trehalose-phosphatase
Probab=95.89 E-value=0.067 Score=55.16 Aligned_cols=68 Identities=24% Similarity=0.222 Sum_probs=48.0
Q ss_pred eecChh---hHHHHHHHHhhc-C---C---EEEEEcCCCCChhhhhc-----CCeeEEecCchHHHHhhcchhccCCChh
Q 010523 301 AGVFPE---HKYEIVKHLQAR-N---H---ICGMIGNGVNDAPALKK-----ADIGIAVADATDAARSAADIVLTEPGLN 365 (508)
Q Consensus 301 a~~~P~---~K~~iV~~l~~~-g---~---~v~~vGDG~ND~~al~~-----AdvGIa~~~~~~~a~~aADivl~~~~l~ 365 (508)
-++.|. +|...|+.+.+. | . .++++||+.||..||+. +++||+|+++... -.|++.|.+ -.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~--t~A~y~L~d--p~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKE--SNAFYSLRD--PS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCC--ccceEEcCC--HH
Confidence 355563 898888877654 2 1 25899999999999996 6899999975532 357787744 56
Q ss_pred HHHHHHH
Q 010523 366 VIITAVL 372 (508)
Q Consensus 366 ~i~~~i~ 372 (508)
.+...+.
T Consensus 368 eV~~~L~ 374 (384)
T PLN02580 368 EVMEFLK 374 (384)
T ss_pred HHHHHHH
Confidence 6655554
No 133
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=95.86 E-value=0.018 Score=54.07 Aligned_cols=95 Identities=15% Similarity=0.112 Sum_probs=59.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++-|++.++++.|++.|+++.++|+-... .....+.+|+... +. .++...+. .+....|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~-fd-~i~~s~~~-----------------~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY-FD-FVVTSYEV-----------------GAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh-cc-eEEeeccc-----------------CCCCCCHH
Confidence 46789999999999999999999976553 4556667776321 11 11111000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCee
Q 010523 307 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 341 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~AdvG 341 (508)
-=..+++.+.-....++||||+. +|+.+-+.|++-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 22233444444457899999997 899998888763
No 134
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.84 E-value=0.074 Score=47.71 Aligned_cols=109 Identities=10% Similarity=0.194 Sum_probs=79.4
Q ss_pred HHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCC-CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH
Q 010523 185 VINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFD-PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR 263 (508)
Q Consensus 185 ~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D-~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~ 263 (508)
..+.+..+|.+.+.+-.++ +++. ..+ ..-|++.+=+.+++.+|+++.++|..+..-+...+..
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~---wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~ 82 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVP---WDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK 82 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceec---ccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh
Confidence 4677889999999886654 3333 222 2457888889999999999999999999999999999
Q ss_pred hCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhh---cCCEEEEEcCCC-CChhhhhcCC
Q 010523 264 LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQA---RNHICGMIGNGV-NDAPALKKAD 339 (508)
Q Consensus 264 lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~---~g~~v~~vGDG~-ND~~al~~Ad 339 (508)
+|++- ++.-.-|-.+ .+-+.+++ ....|+||||.. .|+-+=+.++
T Consensus 83 l~v~f------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 83 LGVPF------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred cCCce------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 99851 2222233332 44444544 467899999985 7988877777
Q ss_pred e
Q 010523 340 I 340 (508)
Q Consensus 340 v 340 (508)
+
T Consensus 132 ~ 132 (175)
T COG2179 132 M 132 (175)
T ss_pred c
Confidence 6
No 135
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.77 E-value=0.013 Score=52.35 Aligned_cols=95 Identities=14% Similarity=-0.042 Sum_probs=64.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++||++.+.++.|+ .++++.++|.-....+..+-+.+++... +...++.+++.. ..-|.
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~~-------------------~~KP~ 103 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDECV-------------------FVKGK 103 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcccc-------------------ccCCe
Confidence 56999999999998 5799999999999999999998887431 111222211110 01121
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEE
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 343 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa 343 (508)
=...++.+......|++|||..+|..+-+.++|-|.
T Consensus 104 -~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 -YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred -EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 011233444456789999999999998877766554
No 136
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.59 E-value=0.042 Score=52.90 Aligned_cols=112 Identities=17% Similarity=0.126 Sum_probs=69.0
Q ss_pred CCCcchHHHHHHH--HhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecC
Q 010523 227 PPIHDSAETIRRA--LSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 304 (508)
Q Consensus 227 ~~r~~~~~~I~~l--~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 304 (508)
|+-|+.++.++.+ +..|+.+.++|--|.-.-..+-+.-|+.... . .+++....-+.-..+.+...- ..-|..+.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f-~-~I~TNpa~~~~~G~l~v~pyh--~h~C~~C~ 146 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF-S-EIFTNPACFDADGRLRVRPYH--SHGCSLCP 146 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc-c-eEEeCCceecCCceEEEeCcc--CCCCCcCC
Confidence 4678999999999 4589999999999988888888888875321 1 111111000000000011100 02244555
Q ss_pred h-hhHHHHHHHHhhc----C---CEEEEEcCCCCChhhhh---cCCeeE
Q 010523 305 P-EHKYEIVKHLQAR----N---HICGMIGNGVNDAPALK---KADIGI 342 (508)
Q Consensus 305 P-~~K~~iV~~l~~~----g---~~v~~vGDG~ND~~al~---~AdvGI 342 (508)
| -=|..+++.+.+. | .+|.+||||.||..... .+|+-.
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 4 3688999888765 4 68999999999975442 455543
No 137
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=95.21 E-value=0.037 Score=52.66 Aligned_cols=96 Identities=13% Similarity=0.183 Sum_probs=61.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.++++.| ++++.++|+.....+...-+..|+.... ...++.+.+.. .....|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 3568999999988 5999999999888887777777874321 11111111100 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEE
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 343 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa 343 (508)
-=....+.+.-....|+||||..+|..+-+.|++...
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 2233444444445679999999999999999998654
No 138
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.16 E-value=0.12 Score=50.85 Aligned_cols=87 Identities=13% Similarity=0.088 Sum_probs=57.9
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHH---HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEe
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLA---IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 301 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~---~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 301 (508)
..++-|++.+.++.+++.|+++.++|+.... .+...-+..|++..... .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-------------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-------------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-------------------------eEEe
Confidence 4457799999999999999999999998743 33455566777532111 1122
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhh
Q 010523 302 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 336 (508)
Q Consensus 302 ~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~ 336 (508)
+-....|..-.+.+.+...+++++||-.+|.....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 21223455555566555567999999999986543
No 139
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=94.99 E-value=0.035 Score=52.42 Aligned_cols=102 Identities=14% Similarity=0.078 Sum_probs=58.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHH--HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecC
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAI--AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 304 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~--a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 304 (508)
++.|++.++++.|++.|+++.++|...... ........++... +. .++.+.+. ....-.
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~-fd-~v~~s~~~-----------------~~~KP~ 154 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL-FD-AVVESCLE-----------------GLRKPD 154 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh-CC-EEEEeeec-----------------CCCCCC
Confidence 568999999999999999999999865432 2222222333111 00 00000000 001112
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCc
Q 010523 305 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA 347 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~ 347 (508)
|+-=..+.+.+.-....++||||...|+.+-+.|++- |.+.+.
T Consensus 155 p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 155 PRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 2222233344444456799999999999999999984 555443
No 140
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=94.89 E-value=0.08 Score=45.99 Aligned_cols=39 Identities=10% Similarity=0.103 Sum_probs=33.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCC-cHHHHHHHHHHhC
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLG 265 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD-~~~~a~~ia~~lg 265 (508)
++.+++.++++.|++.|+++.++|+. ....+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 7777777666665
No 141
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=94.88 E-value=0.079 Score=62.25 Aligned_cols=116 Identities=16% Similarity=0.179 Sum_probs=77.2
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+-|++.+.++.|+++|+++.++|+-....+...-+.+|+....+. .++.+++.. ...-.|+-
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~~~-----------------~~KP~Pe~ 223 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADAFE-----------------NLKPAPDI 223 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECcccc-----------------cCCCCHHH
Confidence 568999999999999999999999999888888888888421111 111111100 11122322
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecC---chHHHHhhcchhccC
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD---ATDAARSAADIVLTE 361 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~---~~~~a~~aADivl~~ 361 (508)
=....+.+.-....|++|||..+|+.+-+.|++ -|++.. ..+.....+|+++.+
T Consensus 224 ~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 224 FLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 234455555556789999999999999999998 355542 233344567777754
No 142
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=94.81 E-value=0.052 Score=55.53 Aligned_cols=100 Identities=11% Similarity=0.069 Sum_probs=59.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 291 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD---------------~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
++.|++.++++.|++.|+++.++|+- ....+..+.+..|+. +....+......+
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~---fd~i~i~~~~~sd-------- 98 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK---FDEVLICPHFPED-------- 98 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc---eeeEEEeCCcCcc--------
Confidence 57899999999999999999999983 123345556666663 1111111000000
Q ss_pred HHhhhcceEeecChhh--HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEe
Q 010523 292 ELIEKADGFAGVFPEH--KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV 344 (508)
Q Consensus 292 ~~~~~~~v~a~~~P~~--K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~ 344 (508)
...++ .|+. =..+.+.+.-....++||||+.+|..+-+.|++- |.+
T Consensus 99 ------~~~~r-KP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v 147 (354)
T PRK05446 99 ------NCSCR-KPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRY 147 (354)
T ss_pred ------cCCCC-CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEE
Confidence 00011 1221 1122222223347899999999999999999985 444
No 143
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=94.64 E-value=0.091 Score=47.89 Aligned_cols=94 Identities=6% Similarity=-0.004 Sum_probs=57.0
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH------------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLA------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 295 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~------------~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
+-+++.++++.|++.|+++.++|..... .+..+.+.+|+.. ..++.+...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~~-------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHAG-------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCCC--------------
Confidence 3489999999999999999999975542 3456667777732 111111000
Q ss_pred hcceEeecChhhHHHHHHHHh--hcCCEEEEEcCCC--------CChhhhhcCCeeE
Q 010523 296 KADGFAGVFPEHKYEIVKHLQ--ARNHICGMIGNGV--------NDAPALKKADIGI 342 (508)
Q Consensus 296 ~~~v~a~~~P~~K~~iV~~l~--~~g~~v~~vGDG~--------ND~~al~~AdvGI 342 (508)
.+..-.|+-=..+.+.+. -....++||||.. +|..+-++|++-.
T Consensus 105 ---~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 ---LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ---CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 001111222223344443 2346799999986 6999888887643
No 144
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.61 E-value=0.17 Score=49.04 Aligned_cols=94 Identities=19% Similarity=0.243 Sum_probs=59.2
Q ss_pred EEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHH--HHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc
Q 010523 220 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK--ETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 297 (508)
Q Consensus 220 G~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~--~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
|.+.-.+.+-|++.+++++|+++|+++.++|.-...... ...+.+|+....+ ..++.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-~~Ii~-------------------- 75 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-EMIIS-------------------- 75 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-ceEEc--------------------
Confidence 555566778899999999999999999999986654443 4557778742111 11111
Q ss_pred ceEeecChhhHHHHHHHHhh---cCCEEEEEcCCCCChhhhhcCC
Q 010523 298 DGFAGVFPEHKYEIVKHLQA---RNHICGMIGNGVNDAPALKKAD 339 (508)
Q Consensus 298 ~v~a~~~P~~K~~iV~~l~~---~g~~v~~vGDG~ND~~al~~Ad 339 (508)
+... ....+.+.+++ .+..+.++||+.+|...+..++
T Consensus 76 ---s~~~--~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 76 ---SGEI--AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ---cHHH--HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 1100 01122222222 3567999999999998886543
No 145
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=94.43 E-value=0.095 Score=50.10 Aligned_cols=98 Identities=13% Similarity=0.101 Sum_probs=64.1
Q ss_pred cCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhC---CCCCCCCCccccCCchhhhhhcCChhHHhhhcceE
Q 010523 224 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG---MGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300 (508)
Q Consensus 224 l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lg---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 300 (508)
+.-++.+|+.+++++|++.|+++.++|.........+-+..+ +... +. ..+ . ..+.
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-f~-~~f------------------d-~~~g 150 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-FS-GYF------------------D-TTVG 150 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-cc-eEE------------------E-eCcc
Confidence 345688999999999999999999999988776665554432 2110 00 000 0 0111
Q ss_pred eecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeE
Q 010523 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 342 (508)
Q Consensus 301 a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGI 342 (508)
..-.|+-=..+.+.+.-....++++||...|+.+-++|++-.
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 122233224455555555678999999999999999999854
No 146
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=94.29 E-value=0.055 Score=52.60 Aligned_cols=66 Identities=20% Similarity=0.193 Sum_probs=47.4
Q ss_pred cChhhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcC--------CeeEEecCchHHHHhhcchhccCCChhHHHHH
Q 010523 303 VFPEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKA--------DIGIAVADATDAARSAADIVLTEPGLNVIITA 370 (508)
Q Consensus 303 ~~P~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~A--------dvGIa~~~~~~~a~~aADivl~~~~l~~i~~~ 370 (508)
..+.+|...++.+.+. ...++++||+.||.+|++.+ ..||+|+.+. .+..|++++. +...+...
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHH
Confidence 4455788877776543 35799999999999999998 4788885332 3567898885 46666555
Q ss_pred HH
Q 010523 371 VL 372 (508)
Q Consensus 371 i~ 372 (508)
+.
T Consensus 239 L~ 240 (244)
T TIGR00685 239 LG 240 (244)
T ss_pred HH
Confidence 43
No 147
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.21 E-value=0.24 Score=47.46 Aligned_cols=88 Identities=17% Similarity=0.249 Sum_probs=55.6
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHH---HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEe
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 301 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~---a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 301 (508)
.-|.-|++.+.++.+++.|++|+++||..... +..--++.|++. +...++.+... .
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d-------------------~ 176 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLED-------------------S 176 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCC-------------------C
Confidence 34678999999999999999999999999755 223334456642 11122221000 0
Q ss_pred ecC-hhhHHHHHHHHhhcCCE-EEEEcCCCCChh
Q 010523 302 GVF-PEHKYEIVKHLQARNHI-CGMIGNGVNDAP 333 (508)
Q Consensus 302 ~~~-P~~K~~iV~~l~~~g~~-v~~vGDG~ND~~ 333 (508)
+.+ -.-|...-+.+.+.|+. ++.+||..+|..
T Consensus 177 ~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 177 NKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred CchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 001 11166666677777765 678999988873
No 148
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=94.13 E-value=0.19 Score=57.45 Aligned_cols=37 Identities=8% Similarity=-0.020 Sum_probs=31.1
Q ss_pred CCCcchHHHHHHH-HhCCCcEEEEcCCcHHHHHHHHHH
Q 010523 227 PPIHDSAETIRRA-LSLGLGVKMITGDQLAIAKETGRR 263 (508)
Q Consensus 227 ~~r~~~~~~I~~l-~~~Gi~v~mlTGD~~~~a~~ia~~ 263 (508)
.|-+++.+++++| ++.|+.|+++||+...+....-..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 5667899999997 778999999999999888876644
No 149
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.72 E-value=0.28 Score=46.00 Aligned_cols=37 Identities=16% Similarity=0.136 Sum_probs=34.0
Q ss_pred chHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 231 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 231 ~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
.+.+.+.+|+++|++|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5778999999999999999999999999999999985
No 150
>PLN03017 trehalose-phosphatase
Probab=93.68 E-value=1.1 Score=46.11 Aligned_cols=62 Identities=21% Similarity=0.229 Sum_probs=43.3
Q ss_pred hHHHHHHHHhhc-------CCEEEEEcCCCCChhhhhcC-----CeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR-------NHICGMIGNGVNDAPALKKA-----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~-------g~~v~~vGDG~ND~~al~~A-----dvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
+|...++.|-+. +..++++||...|-.||+.. ++||.+|.... ...|++.|. +.+.+...+.
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L~--dp~eV~~fL~ 356 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSLQ--DPSEVMDFLA 356 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeCC--CHHHHHHHHH
Confidence 788888877653 23689999999999999855 47777874221 256788884 4666665553
No 151
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=93.60 E-value=0.15 Score=47.79 Aligned_cols=101 Identities=10% Similarity=0.010 Sum_probs=59.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH-HHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG-RRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia-~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
++.|++.++++.|++.|+++.++|.-+.......- +..++... + ..++...+. ....-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~-----------------~~~KP~p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQDL-----------------GMRKPEA 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEeccc-----------------CCCCCCH
Confidence 46899999999999999999999997765443322 11233110 0 001100000 0011122
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecC
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD 346 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~ 346 (508)
+-=..+++.+.-....+++|||...|+.+-+.+++- |.+.+
T Consensus 145 ~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~ 186 (199)
T PRK09456 145 RIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTD 186 (199)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecC
Confidence 222334455544567799999999999999999984 44444
No 152
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=93.35 E-value=0.18 Score=46.46 Aligned_cols=90 Identities=14% Similarity=0.161 Sum_probs=59.4
Q ss_pred hHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHH
Q 010523 232 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEI 311 (508)
Q Consensus 232 ~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~i 311 (508)
..++++.|++. +++.++||.....+...-+.+|+.... ..++..++.. .....|+-=...
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~~~~~~ 151 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDVQ-----------------HHKPAPDTFLRC 151 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhcc-----------------CCCCChHHHHHH
Confidence 36889998865 899999999999999988888884321 1122111100 111223222334
Q ss_pred HHHHhhcCCEEEEEcCCCCChhhhhcCCee
Q 010523 312 VKHLQARNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 312 V~~l~~~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
.+.++.....|++|||..+|+.+-+.|++-
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 444544455699999999999999999974
No 153
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=93.19 E-value=0.17 Score=51.39 Aligned_cols=91 Identities=15% Similarity=0.076 Sum_probs=66.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH----hCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEee
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR----LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 302 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~----lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 302 (508)
++.+++.++|+.|++.|+.+.++|.-+...+..+-+. +|+.... .+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 4578999999999999999999999999999988887 6663210 0111
Q ss_pred cChhhHHH----HHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEec
Q 010523 303 VFPEHKYE----IVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA 345 (508)
Q Consensus 303 ~~P~~K~~----iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~ 345 (508)
..+..|.. +.+.+.-....++||||...|..+.+.+...+.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 22233444 34444434578999999999999999988876554
No 154
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.06 E-value=0.44 Score=43.41 Aligned_cols=112 Identities=17% Similarity=0.160 Sum_probs=80.9
Q ss_pred HHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCc--EEEEcCC-------cHHHHHH
Q 010523 189 FAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLG--VKMITGD-------QLAIAKE 259 (508)
Q Consensus 189 ~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~--v~mlTGD-------~~~~a~~ 259 (508)
+.+.|.|.+.+=.++ ++ ...=++.+-++..+.+++|++.+.. |+++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 667888888875544 11 1234677889999999999998875 9999976 4788999
Q ss_pred HHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhc-----CCEEEEEcCCC-CChh
Q 010523 260 TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGV-NDAP 333 (508)
Q Consensus 260 ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~-----g~~v~~vGDG~-ND~~ 333 (508)
+.+.+|++- -.+...-|.-..++.+.++.+ .+.++||||-. .|+-
T Consensus 101 ~~~~lgIpv-----------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-----------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-----------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999841 013345676667888888765 67899999974 7877
Q ss_pred hhhcCC-eeEEe
Q 010523 334 ALKKAD-IGIAV 344 (508)
Q Consensus 334 al~~Ad-vGIa~ 344 (508)
+=...+ .+|-+
T Consensus 152 ~gN~~G~~tilv 163 (168)
T PF09419_consen 152 MGNRMGSYTILV 163 (168)
T ss_pred HhhccCceEEEE
Confidence 766655 34433
No 155
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=92.18 E-value=0.22 Score=45.81 Aligned_cols=97 Identities=11% Similarity=0.075 Sum_probs=62.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+++++|+ .+++++|+-....+....+.+|+... +. .++..++.... ..++.-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~-fd-~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC-FD-GIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh-hC-eEEEeecccCc-------------cCCCCCCHH
Confidence 36789999999987 47999999998888888898888431 11 11111110000 000112232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
-=..+++.+......++||||...|+.+-+.+++.
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 22344555555567899999999999998888874
No 156
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=91.63 E-value=0.29 Score=45.92 Aligned_cols=145 Identities=16% Similarity=0.171 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCC-cEEEEcCCcHHH
Q 010523 178 IGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQLAI 256 (508)
Q Consensus 178 ~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi-~v~mlTGD~~~~ 256 (508)
+.+-+...++.+.++|.|.--+. -+.=.=|+-|+..++|+.+++.|- .+.++|--|.-.
T Consensus 55 Wne~M~rv~k~Lheqgv~~~~ik--------------------~~~r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfF 114 (256)
T KOG3120|consen 55 WNELMDRVFKELHEQGVRIAEIK--------------------QVLRSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFF 114 (256)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHH--------------------HHHhcCCCCccHHHHHHHHHhCCCceEEEEecCchhH
Confidence 44555667777888886532211 111112567899999999999996 999999999877
Q ss_pred HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh-hHHHHHHHHhhc------CC-EEEEEcCC
Q 010523 257 AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE-HKYEIVKHLQAR------NH-ICGMIGNG 328 (508)
Q Consensus 257 a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~-~K~~iV~~l~~~------g~-~v~~vGDG 328 (508)
...+-+..|+.+-. . .+++....-+....+.+...- .-.-|.++.|. =|..++..++.. .+ ++.++|||
T Consensus 115 Ie~~Lea~~~~d~F-~-~IfTNPa~~da~G~L~v~pyH-~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG 191 (256)
T KOG3120|consen 115 IEEILEAAGIHDLF-S-EIFTNPACVDASGRLLVRPYH-TQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDG 191 (256)
T ss_pred HHHHHHHccHHHHH-H-HHhcCCcccCCCCcEEeecCC-CCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCC
Confidence 77777776663210 0 001000000000000000000 00113333222 255666555443 22 79999999
Q ss_pred CCCh-hhhhcCCeeEEec
Q 010523 329 VNDA-PALKKADIGIAVA 345 (508)
Q Consensus 329 ~ND~-~al~~AdvGIa~~ 345 (508)
.||. |+++...--+||-
T Consensus 192 ~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 192 ANDFCPVLRLRACDVAMP 209 (256)
T ss_pred CCCcCcchhcccCceecc
Confidence 9995 5555544444553
No 157
>PLN02645 phosphoglycolate phosphatase
Probab=90.05 E-value=0.44 Score=48.08 Aligned_cols=47 Identities=26% Similarity=0.308 Sum_probs=37.8
Q ss_pred EEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH---HHhCC
Q 010523 220 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGM 266 (508)
Q Consensus 220 G~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia---~~lgi 266 (508)
|++.-.+.+=+++.++|+.|++.|++++++|+....+...+. +.+|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 555555667799999999999999999999999976666666 45666
No 158
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=88.34 E-value=1.2 Score=42.62 Aligned_cols=101 Identities=16% Similarity=0.196 Sum_probs=72.5
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
.++.|++.+.++.|++.|+.+.+.|+-....+..+...+|+.... ..++.+.+. .-..-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv-----------------~~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDV-----------------ARGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHH-----------------hcCCCCC
Confidence 367899999999999999999999999999999999999985321 111111111 0112334
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEec
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA 345 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~ 345 (508)
+-=..-.+.|.-....|+.+.|..|.+.|-++|+.- |++.
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~ 186 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVP 186 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEec
Confidence 443445555555677899999999999999999974 3443
No 159
>PHA02597 30.2 hypothetical protein; Provisional
Probab=88.00 E-value=0.99 Score=41.93 Aligned_cols=97 Identities=13% Similarity=0.142 Sum_probs=54.7
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.|++.++++.|++.+ +.+++|.-+.......-+.+|+..- ++. .+. ..+.++... .
T Consensus 75 ~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~-f~~-~f~-------------------~i~~~~~~~-~ 131 (197)
T PHA02597 75 AYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNAL-FPG-AFS-------------------EVLMCGHDE-S 131 (197)
T ss_pred CCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHh-CCC-ccc-------------------EEEEeccCc-c
Confidence 6789999999999875 5667776544443334455555210 000 000 001122111 1
Q ss_pred HHHHHH-HHhhc-CCEEEEEcCCCCChhhhhcC--Cee-EEecCc
Q 010523 308 KYEIVK-HLQAR-NHICGMIGNGVNDAPALKKA--DIG-IAVADA 347 (508)
Q Consensus 308 K~~iV~-~l~~~-g~~v~~vGDG~ND~~al~~A--dvG-Ia~~~~ 347 (508)
|.+++. .+++. ...++||||..+|+.+-++| ++- |.+..+
T Consensus 132 kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~ 176 (197)
T PHA02597 132 KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRG 176 (197)
T ss_pred cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecch
Confidence 233333 22222 34688999999999999999 984 444433
No 160
>PLN02423 phosphomannomutase
Probab=87.47 E-value=0.92 Score=44.07 Aligned_cols=43 Identities=23% Similarity=0.323 Sum_probs=36.6
Q ss_pred hHHHHHHHHhhcCCEEEEEcC----CCCChhhhhc-CCeeEEecCchHH
Q 010523 307 HKYEIVKHLQARNHICGMIGN----GVNDAPALKK-ADIGIAVADATDA 350 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGD----G~ND~~al~~-AdvGIa~~~~~~~ 350 (508)
+|..-++.|+ ....|+++|| |.||.+||+. .=.||++.+-.|.
T Consensus 189 nKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~ 236 (245)
T PLN02423 189 DKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDT 236 (245)
T ss_pred CHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHH
Confidence 7999999999 7789999999 8999999997 5569999765443
No 161
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=87.27 E-value=0.39 Score=39.79 Aligned_cols=48 Identities=21% Similarity=0.304 Sum_probs=35.3
Q ss_pred EEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH---HHhCCC
Q 010523 220 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 267 (508)
Q Consensus 220 G~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia---~~lgi~ 267 (508)
|++...+.+=|++.++|+.|++.|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 455557778899999999999999999999988765544444 556764
No 162
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=86.55 E-value=1 Score=43.27 Aligned_cols=89 Identities=22% Similarity=0.205 Sum_probs=54.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHH---HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeec
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLA---IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 303 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~---~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 303 (508)
+.=|++.+.++.+++.|++|..+||++.. ....--+..|+... ...++.+.... -...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~-----------------~~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDP-----------------SKKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESST-----------------SS--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhcccccccc-----------------cccc
Confidence 34468999999999999999999998854 23333445565321 11111111100 0000
Q ss_pred ChhhHHHHHHHHhhcCC-EEEEEcCCCCChhh
Q 010523 304 FPEHKYEIVKHLQARNH-ICGMIGNGVNDAPA 334 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~g~-~v~~vGDG~ND~~a 334 (508)
..+-|...-+.+.++|+ +++.+||..+|..-
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 12237777888888865 56789999999875
No 163
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=85.69 E-value=4.4 Score=39.77 Aligned_cols=90 Identities=21% Similarity=0.277 Sum_probs=52.9
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH---HHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEe
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 301 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia---~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 301 (508)
..|.=|++.+..+.+++.|++|+++||+....-..+. ++.|+.. ....++.+.... -.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~--~~~LiLR~~~D~-----------------~~ 203 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT--WEKLILKDPQDN-----------------SA 203 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC--cceeeecCCCCC-----------------cc
Confidence 4566789999999999999999999999864332233 3356642 111222211000 00
Q ss_pred ecChhhHHHHHHHHhhcCC-EEEEEcCCCCChh
Q 010523 302 GVFPEHKYEIVKHLQARNH-ICGMIGNGVNDAP 333 (508)
Q Consensus 302 ~~~P~~K~~iV~~l~~~g~-~v~~vGDG~ND~~ 333 (508)
.-..+-|...-+.+.+.|+ +++.+||.-+|..
T Consensus 204 ~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl~ 236 (275)
T TIGR01680 204 ENAVEYKTAARAKLIQEGYNIVGIIGDQWNDLK 236 (275)
T ss_pred chhHHHHHHHHHHHHHcCceEEEEECCCHHhcc
Confidence 0111234444455555666 5678999988873
No 164
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=85.62 E-value=1.2 Score=42.88 Aligned_cols=92 Identities=11% Similarity=0.107 Sum_probs=53.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++-|++.++++.|++. +++.++|..+... +..|+.... . .++..++.. ...-.|+
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~f-d-~i~~~~~~~-----------------~~KP~p~ 167 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDYF-E-FVLRAGPHG-----------------RSKPFSD 167 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHhh-c-eeEecccCC-----------------cCCCcHH
Confidence 3568999999999875 8999999866541 445653110 0 111100000 0011121
Q ss_pred hHHHHHHHHhhcCCEEEEEcCC-CCChhhhhcCCeeEE
Q 010523 307 HKYEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIA 343 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG-~ND~~al~~AdvGIa 343 (508)
-=....+.+.-....++||||. ..|+.+-+.|++-..
T Consensus 168 ~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 168 MYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred HHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEE
Confidence 1122334444445679999999 599999999997533
No 165
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=84.87 E-value=3 Score=39.43 Aligned_cols=97 Identities=12% Similarity=0.176 Sum_probs=61.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++-+++.++++.++.. +++.++|--.........+++|+... +...+.++. +...-|+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~~--------------------~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISED--------------------VGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEecc--------------------cccCCCC
Confidence 3567889999999888 99999999888888888899996432 221111111 1112233
Q ss_pred hH--HHHHHHHhhcCCEEEEEcCC-CCChhhhhcCCe-eEEec
Q 010523 307 HK--YEIVKHLQARNHICGMIGNG-VNDAPALKKADI-GIAVA 345 (508)
Q Consensus 307 ~K--~~iV~~l~~~g~~v~~vGDG-~ND~~al~~Adv-GIa~~ 345 (508)
.+ ....+.+.-....++||||. .||+..-+.++. +|-+.
T Consensus 157 ~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~ 199 (229)
T COG1011 157 PEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWIN 199 (229)
T ss_pred cHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEEC
Confidence 22 23344444445689999997 478566666666 45554
No 166
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=84.86 E-value=0.46 Score=46.55 Aligned_cols=118 Identities=16% Similarity=0.173 Sum_probs=66.4
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh-----hcceEeecC
Q 010523 230 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE-----KADGFAGVF 304 (508)
Q Consensus 230 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~a~~~ 304 (508)
++..++++.|++.++++.+.|+.............|+.. +...+. +..++..-.
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~---------------------~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP---------------------FVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH---------------------HHHHHHHHhCCCceeecCCC
Confidence 677888999999999999998876543322222222210 000000 001122333
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCe-eEEecCch---H---HHHhhcchhccCCChhHHHHH
Q 010523 305 PEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADI-GIAVADAT---D---AARSAADIVLTEPGLNVIITA 370 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~Adv-GIa~~~~~---~---~a~~aADivl~~~~l~~i~~~ 370 (508)
|+-=..+.+.+......++||||.. +|..+-+.+++ +|.+..+. + .....+|+++ +++..+...
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 3333344455554567899999996 89999999987 45554331 1 1123466666 446666543
No 167
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=83.44 E-value=5.3 Score=35.92 Aligned_cols=102 Identities=20% Similarity=0.157 Sum_probs=65.9
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHH---HHHh-----CCCCCCCCCccccC-CchhhhhhcCChhHHhhh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKET---GRRL-----GMGTNMYPSSALSG-QDRDESIVALPVDELIEK 296 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~i---a~~l-----gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 296 (508)
|..++++.+..+.+++.|++++-+|+...--+..+ -... +++ +..++.. +..-..+.
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP----~Gpv~~sP~~l~~al~---------- 91 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLP----DGPVLLSPDSLFSALH---------- 91 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCC----CCCEEECCcchhhhhh----------
Confidence 68999999999999999999999999996444332 2333 332 1111111 11100000
Q ss_pred cceEeecChhhHHHHHHHHhhc-----CCEEEEEcCCCCChhhhhcCCee
Q 010523 297 ADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 297 ~~v~a~~~P~~K~~iV~~l~~~-----g~~v~~vGDG~ND~~al~~AdvG 341 (508)
-++..+-.-+.|...++.++.. ....+..|...+|+.+.+.++|-
T Consensus 92 rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 0123343456788888888764 34677889989999999988764
No 168
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=82.74 E-value=5.2 Score=43.08 Aligned_cols=98 Identities=15% Similarity=0.070 Sum_probs=61.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH-hCCCCCCCC------CccccCCchhhhhhcCChhHHhhhcceE
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNMYP------SSALSGQDRDESIVALPVDELIEKADGF 300 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~-lgi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 300 (508)
+++++.+. +++.|. ++++|+-...-+..+|++ +|++.-+-. ...++|.-.. -
T Consensus 111 l~~~a~~~---~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g-----------------~ 169 (497)
T PLN02177 111 VHPETWRV---FNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKK-----------------P 169 (497)
T ss_pred cCHHHHHH---HHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecC-----------------C
Confidence 45555544 456774 599999999999999987 898521100 1111111000 0
Q ss_pred eecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecC
Q 010523 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD 346 (508)
Q Consensus 301 a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~ 346 (508)
..+.-++|..-++..........+.||..||.|||+.|+-+.++..
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 0134466877666433211223789999999999999999999985
No 169
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=80.36 E-value=2.2 Score=38.66 Aligned_cols=85 Identities=15% Similarity=0.078 Sum_probs=52.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++ ++.++|.-+.......-+.+|+.... ..++++++. ....-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-----------------~~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDTV-----------------RAYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhhc-----------------CCCCCCHH
Confidence 46889999998 37789998888888888888874211 011111100 01122232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhc
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKK 337 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~ 337 (508)
-=....+.+.-....|+||||+..|+.+-++
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 2234455555556789999999999876554
No 170
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=80.25 E-value=2.9 Score=41.46 Aligned_cols=41 Identities=7% Similarity=-0.016 Sum_probs=37.8
Q ss_pred CC-cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 010523 228 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 268 (508)
Q Consensus 228 ~r-~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 268 (508)
+| |++.+++++|++.|+++.++|+-....+...-+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999964
No 171
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=80.05 E-value=1.8 Score=39.23 Aligned_cols=92 Identities=16% Similarity=0.045 Sum_probs=60.1
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
=..||++.+.++.|.+. +++++.|-.....|..+...++.....+.. ++..++. ... .|
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~-~l~r~~~-----------------~~~--~~ 99 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISR-RLYRESC-----------------VFT--NG 99 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeE-EEEcccc-----------------EEe--CC
Confidence 34799999999999987 999999999999999999998864211111 1111000 000 01
Q ss_pred hhHHHHHHHHh---hcCCEEEEEcCCCCChhhhhcCCeeE
Q 010523 306 EHKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIGI 342 (508)
Q Consensus 306 ~~K~~iV~~l~---~~g~~v~~vGDG~ND~~al~~AdvGI 342 (508)
.+++.|. .....|++|||...|..+-+.+.|-|
T Consensus 100 ----~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i 135 (162)
T TIGR02251 100 ----KYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPI 135 (162)
T ss_pred ----CEEeEchhcCCChhhEEEEeCChhhhccCccCEeec
Confidence 1333333 33467999999998887666655544
No 172
>PRK10444 UMP phosphatase; Provisional
Probab=80.03 E-value=1.9 Score=42.06 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=39.1
Q ss_pred EEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh
Q 010523 220 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 264 (508)
Q Consensus 220 G~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l 264 (508)
|.+.-.+.+-|++.++|+.|++.|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 566666788899999999999999999999999998877777764
No 173
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=78.90 E-value=0.5 Score=43.36 Aligned_cols=42 Identities=7% Similarity=-0.039 Sum_probs=29.4
Q ss_pred ccHHHHHHH-HHhhcccccccchhHHHHHHHHhhcccccCCCC
Q 010523 407 FTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 448 (508)
Q Consensus 407 ~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 448 (508)
.|++++|+| .++..+..+.++++.+++..+.|+|+|+..+.+
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~ 44 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEP 44 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchh
Confidence 589999999 556666888999999999999999999844444
No 174
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=78.48 E-value=2.6 Score=41.19 Aligned_cols=48 Identities=23% Similarity=0.376 Sum_probs=36.0
Q ss_pred EEeccCCC----CCcchHHHHHHHHhCCCcEEEEcCCcHHHH---HHHHHHhCCC
Q 010523 220 GLIPLFDP----PIHDSAETIRRALSLGLGVKMITGDQLAIA---KETGRRLGMG 267 (508)
Q Consensus 220 G~i~l~D~----~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a---~~ia~~lgi~ 267 (508)
|.+.-.+. +=|++.++|++|++.|++++++||....+. ....+.+|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44445455 778999999999999999999999876653 3344556763
No 175
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=78.21 E-value=3.9 Score=39.73 Aligned_cols=48 Identities=8% Similarity=0.016 Sum_probs=38.3
Q ss_pred EEeccCCCCCcchHHHHHHHHhCCCcEEEEcC---CcHHHHHHHHHHhCCC
Q 010523 220 GLIPLFDPPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 267 (508)
Q Consensus 220 G~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTG---D~~~~a~~ia~~lgi~ 267 (508)
|.+.-.+.+=+++.++|++|++.|++++++|| ..........+.+|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44445566667999999999999999999996 5677777777778874
No 176
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=77.62 E-value=9.7 Score=38.91 Aligned_cols=112 Identities=13% Similarity=0.129 Sum_probs=66.7
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh-C-------CCCCCCCCccccCCchhhhhh-c------------
Q 010523 229 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL-G-------MGTNMYPSSALSGQDRDESIV-A------------ 287 (508)
Q Consensus 229 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l-g-------i~~~~~~~~~~~~~~~~~~~~-~------------ 287 (508)
-|++.+.++.|++.|+++.++|+-....+..+.+.+ | +.. .+ +.++.+.....-.. .
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~-yF-D~IIt~a~KP~FF~~~~pf~~v~~~~g~ 263 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRD-YF-DVVIVDARKPGFFTEGRPFRQVDVETGS 263 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHh-hC-cEEEeCCCCCcccCCCCceEEEeCCCCc
Confidence 469999999999999999999999999999988886 6 321 11 12222211110000 0
Q ss_pred CChhHH--hhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCC-CChhhhh-cCCe-eEEec
Q 010523 288 LPVDEL--IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGV-NDAPALK-KADI-GIAVA 345 (508)
Q Consensus 288 ~~~~~~--~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~-~Adv-GIa~~ 345 (508)
...... .++-.++++=+- ..+.+.+...+..|++|||.. .|+-.-+ .++. .|.+-
T Consensus 264 ~~~~~~~~l~~g~vY~gGn~---~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~ 323 (343)
T TIGR02244 264 LKWGEVDGLEPGKVYSGGSL---KQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAII 323 (343)
T ss_pred ccCCccccccCCCeEeCCCH---HHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEc
Confidence 000000 122234443332 244566667789999999985 6887665 5554 34443
No 177
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=77.37 E-value=4 Score=40.57 Aligned_cols=40 Identities=3% Similarity=-0.135 Sum_probs=36.5
Q ss_pred CC-cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 228 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 228 ~r-~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
+| |++.+++++|++.|+++.++|+.....+......+|+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 46 89999999999999999999988888889999999995
No 178
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=77.05 E-value=7.8 Score=38.30 Aligned_cols=48 Identities=21% Similarity=0.265 Sum_probs=34.9
Q ss_pred EEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHH---HHHHhCCC
Q 010523 220 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKE---TGRRLGMG 267 (508)
Q Consensus 220 G~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~---ia~~lgi~ 267 (508)
|.+.-.+.+=+++.++|++|++.|++++++|+....+... --+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4444456677889999999999999999999976443333 23456763
No 179
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=75.35 E-value=6.4 Score=42.66 Aligned_cols=40 Identities=15% Similarity=0.172 Sum_probs=31.8
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcH------------HHHHHHHHHhCCC
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQL------------AIAKETGRRLGMG 267 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~------------~~a~~ia~~lgi~ 267 (508)
+-|++.+.++.|++.|++++|+|.-.. ..+..+.+.+|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 458999999999999999999997443 3456677777764
No 180
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=75.01 E-value=5.3 Score=36.40 Aligned_cols=91 Identities=29% Similarity=0.383 Sum_probs=60.9
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcH----HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeec
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 303 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~----~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 303 (508)
|++-+++.|.--++.|=.|+.+||..+ .+++.+|+...| +++.+ .+|++-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i-~~m~p-------------------------v~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHI-TNMNP-------------------------VIFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhccc-CCCcc-------------------------eeeccC
Confidence 566678888888889999999999986 355667777666 23222 234433
Q ss_pred Chh-hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEec
Q 010523 304 FPE-HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVA 345 (508)
Q Consensus 304 ~P~-~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~ 345 (508)
.|. .+..-...+|.++ .-..-||+-||+.|-+.|++ ||-+-
T Consensus 169 k~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 169 KPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred CCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeEE
Confidence 331 1122244455554 45678999999999999997 77653
No 181
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=72.79 E-value=11 Score=36.44 Aligned_cols=129 Identities=16% Similarity=0.180 Sum_probs=66.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCc----hhhhhhcCChhHHhhhcceEee
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD----RDESIVALPVDELIEKADGFAG 302 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~a~ 302 (508)
.+|+++.+.++.|++.+|++.+.|+.=-....++-++-|..... ..+.... .+..+. .|.+
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~N---v~VvSN~M~Fd~~g~l~------------gF~~ 154 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPN---VKVVSNFMDFDEDGVLV------------GFKG 154 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTT---EEEEEE-EEE-TTSBEE------------EE-S
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCC---eEEEeeeEEECCcceEe------------ecCC
Confidence 47999999999999999999999987777777776766653221 1110000 000000 0100
Q ss_pred --cChhhHHH-------HHHHHhhcCCEEEEEcCCCCChhhhhcC---CeeEEec--C-ch----HHHHhhcchhccCCC
Q 010523 303 --VFPEHKYE-------IVKHLQARNHICGMIGNGVNDAPALKKA---DIGIAVA--D-AT----DAARSAADIVLTEPG 363 (508)
Q Consensus 303 --~~P~~K~~-------iV~~l~~~g~~v~~vGDG~ND~~al~~A---dvGIa~~--~-~~----~~a~~aADivl~~~~ 363 (508)
.-+-.|-. .-+.++. ...|+..||..-|+.|-.-. +.-+.+| + .. +.-.++=|||+.+|.
T Consensus 155 ~lIH~~NKn~~~l~~~~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~ 233 (246)
T PF05822_consen 155 PLIHTFNKNESALEDSPYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQ 233 (246)
T ss_dssp S---TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--
T ss_pred CceEEeeCCcccccCchHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCC
Confidence 01112221 1122222 35799999999999998655 4444444 3 22 234567899999876
Q ss_pred hhHHHHHH
Q 010523 364 LNVIITAV 371 (508)
Q Consensus 364 l~~i~~~i 371 (508)
--.++..|
T Consensus 234 tm~v~~~i 241 (246)
T PF05822_consen 234 TMDVPNAI 241 (246)
T ss_dssp B-HHHHHH
T ss_pred CchHHHHH
Confidence 55555444
No 182
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=69.37 E-value=5.4 Score=34.53 Aligned_cols=31 Identities=19% Similarity=0.339 Sum_probs=27.9
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHH
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAI 256 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~ 256 (508)
+++.+++.++++++++.|+.++++||.+...
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 6688999999999999999999999998754
No 183
>PTZ00174 phosphomannomutase; Provisional
Probab=69.24 E-value=7.5 Score=37.66 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=29.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG 261 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia 261 (508)
++-+.+.++|+++++.|++++++||++........
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l 56 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQL 56 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 47788999999999999999999999988655433
No 184
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=68.79 E-value=11 Score=35.48 Aligned_cols=50 Identities=20% Similarity=0.354 Sum_probs=42.3
Q ss_pred EEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHH---HhCC
Q 010523 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR---RLGM 266 (508)
Q Consensus 217 ~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~---~lgi 266 (508)
.+-|.+.++|..-|++.++++.|++++.+|..+|.-..++-..+.+ +||+
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 5789999999999999999999999999999998777666555554 4666
No 185
>PTZ00445 p36-lilke protein; Provisional
Probab=65.35 E-value=18 Score=34.17 Aligned_cols=64 Identities=13% Similarity=0.157 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEE------------EeccCCCCCcchHHHHHHHHhCCCc
Q 010523 178 IGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIG------------LIPLFDPPIHDSAETIRRALSLGLG 245 (508)
Q Consensus 178 ~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG------------~i~l~D~~r~~~~~~I~~l~~~Gi~ 245 (508)
..+......+.+.+.|.+++++=+.. ++++ ..-+--.++|+.+..+++|+++||+
T Consensus 27 ~~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~ 93 (219)
T PTZ00445 27 PHESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIK 93 (219)
T ss_pred HHHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCe
Confidence 44566677788999999999886643 3333 1112223799999999999999999
Q ss_pred EEEEcCCcH
Q 010523 246 VKMITGDQL 254 (508)
Q Consensus 246 v~mlTGD~~ 254 (508)
|.++|=-..
T Consensus 94 v~VVTfSd~ 102 (219)
T PTZ00445 94 ISVVTFSDK 102 (219)
T ss_pred EEEEEccch
Confidence 999995443
No 186
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=62.98 E-value=23 Score=32.66 Aligned_cols=24 Identities=13% Similarity=0.138 Sum_probs=22.0
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcC
Q 010523 228 PIHDSAETIRRALSLGLGVKMITG 251 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTG 251 (508)
+.+++.+++..++++|++++|+|-
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN 55 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN 55 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC
Confidence 368999999999999999999985
No 187
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=61.34 E-value=1.1e+02 Score=33.34 Aligned_cols=165 Identities=15% Similarity=0.104 Sum_probs=92.6
Q ss_pred hhHHHHHHHHHHHHHHccC-eeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCc-chHHHHHHHHhCCCcEEEEcCCc
Q 010523 176 SKIGRKVNAVINKFAERGL-RSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIH-DSAETIRRALSLGLGVKMITGDQ 253 (508)
Q Consensus 176 ~~~~~~~~~~~~~~a~~Gl-r~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~-~~~~~I~~l~~~Gi~v~mlTGD~ 253 (508)
....+...+.++.+.++|. ++..+.-+.-. ..+.-..-+|+-.+.....| +-.+.++++++.| +.++..||.
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~-----~a~~i~~~lgi~~~f~~~~p~~K~~~i~~l~~~~-~~v~~vGDg 434 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRA-----VAERVARELGIDEVHAELLPEDKLEIVKELREKY-GPVAMVGDG 434 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHH-----HHHHHHHHcCChhhhhccCcHHHHHHHHHHHhcC-CEEEEEeCC
Confidence 3566778888999999999 76665532210 00000011222112222222 3366778887777 445566776
Q ss_pred HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEc-CCCCCh
Q 010523 254 LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG-NGVNDA 332 (508)
Q Consensus 254 ~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vG-DG~ND~ 332 (508)
..- +..++..+ .-+..| +| +.
T Consensus 435 ~nD-------------------------------------------------------~~al~~A~-vgia~g~~~--~~ 456 (536)
T TIGR01512 435 IND-------------------------------------------------------APALAAAD-VGIAMGASG--SD 456 (536)
T ss_pred HHH-------------------------------------------------------HHHHHhCC-EEEEeCCCc--cH
Confidence 431 22233333 234455 33 33
Q ss_pred hhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--ccccHH
Q 010523 333 PALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLD 410 (508)
Q Consensus 333 ~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~~~--~~~pl~ 410 (508)
.+...||+=+.-.+-.+ -.+. +...-+.-|.+.+|+...+.|++..+..++++.+.+++ ..+..+
T Consensus 457 ~~~~~ad~vl~~~~l~~----l~~~---------i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~~~p~~aa~~m~~s 523 (536)
T TIGR01512 457 VAIETADVVLLNDDLSR----LPQA---------IRLARRTRRIVKQNVVIALGIILLLILLALFGVLPLWLAVLGHEGS 523 (536)
T ss_pred HHHHhCCEEEECCCHHH----HHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHcCh
Confidence 44567777653222111 1111 22333455778999999999999999999999999977 456666
Q ss_pred HHHHHHH
Q 010523 411 TVIAILQ 417 (508)
Q Consensus 411 ~~~~l~~ 417 (508)
++.++.+
T Consensus 524 s~~v~~n 530 (536)
T TIGR01512 524 TVLVILN 530 (536)
T ss_pred HHHHHHH
Confidence 6665543
No 188
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=59.46 E-value=11 Score=37.13 Aligned_cols=47 Identities=21% Similarity=0.256 Sum_probs=39.4
Q ss_pred EEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh
Q 010523 218 FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 264 (508)
Q Consensus 218 ~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l 264 (508)
+=|++.-...+=|++.++|+.|+++|++++.+|.....+...+++++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 34777888888999999999999999999999998877777555543
No 189
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=58.95 E-value=7.7 Score=29.84 Aligned_cols=53 Identities=26% Similarity=0.367 Sum_probs=36.0
Q ss_pred HHHHHHHhhcCCEEEEEcCC-CCChhhhhcCCe-eEEecCc---hHHH---HhhcchhccC
Q 010523 309 YEIVKHLQARNHICGMIGNG-VNDAPALKKADI-GIAVADA---TDAA---RSAADIVLTE 361 (508)
Q Consensus 309 ~~iV~~l~~~g~~v~~vGDG-~ND~~al~~Adv-GIa~~~~---~~~a---~~aADivl~~ 361 (508)
..+.+.+......++||||. ..|+.+-+.+++ +|.+..+ .+.. ...+|+|+.+
T Consensus 11 ~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 11 EQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp HHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESS
T ss_pred HHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECC
Confidence 44555555556679999999 999999999997 4555432 2222 2567887743
No 190
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=58.70 E-value=18 Score=32.43 Aligned_cols=42 Identities=14% Similarity=0.023 Sum_probs=37.5
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 268 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 268 (508)
=.+||++.+.++.|.+. +++++.|.-....|..+.+.++...
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 34799999999999955 9999999999999999999998754
No 191
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=58.17 E-value=22 Score=34.26 Aligned_cols=104 Identities=17% Similarity=0.179 Sum_probs=60.4
Q ss_pred cchHHHHHHHHhCCCcEEEEcC-CcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhH
Q 010523 230 HDSAETIRRALSLGLGVKMITG-DQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHK 308 (508)
Q Consensus 230 ~~~~~~I~~l~~~Gi~v~mlTG-D~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K 308 (508)
++..++++.||+.|..+.++|- |.... .+-..+|+... ++.++..+.+ .-.-|+-+
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r~~--~~l~~~~l~~~--------------------fD~vv~S~e~-g~~KPDp~ 172 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDRLR--LLLLPLGLSAY--------------------FDFVVESCEV-GLEKPDPR 172 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHHHH--HHhhccCHHHh--------------------hhhhhhhhhh-ccCCCChH
Confidence 3555999999999988888873 44332 44445555311 0111100000 01122222
Q ss_pred --HHHHHHHhhcCCEEEEEcCC-CCChhhhhcCCe-eEEecCchHHHHhhcc
Q 010523 309 --YEIVKHLQARNHICGMIGNG-VNDAPALKKADI-GIAVADATDAARSAAD 356 (508)
Q Consensus 309 --~~iV~~l~~~g~~v~~vGDG-~ND~~al~~Adv-GIa~~~~~~~a~~aAD 356 (508)
...++.+..+...|+++||. .||...-+.++. ++-+.+.....+....
T Consensus 173 If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~~~ 224 (237)
T KOG3085|consen 173 IFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKELEY 224 (237)
T ss_pred HHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhhhh
Confidence 33456666667789999995 799999998886 5666665554444433
No 192
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=57.68 E-value=44 Score=33.74 Aligned_cols=49 Identities=20% Similarity=0.217 Sum_probs=38.7
Q ss_pred EEEeccCCCCCcchHHHHHHHHhC----CCcEEEEcCCc---HH-HHHHHHHHhCCC
Q 010523 219 IGLIPLFDPPIHDSAETIRRALSL----GLGVKMITGDQ---LA-IAKETGRRLGMG 267 (508)
Q Consensus 219 lG~i~l~D~~r~~~~~~I~~l~~~----Gi~v~mlTGD~---~~-~a~~ia~~lgi~ 267 (508)
=|++.-.+++-+++.++++.|+.. |+++..+|-.. .. .+..+.+.+|+.
T Consensus 8 DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 8 DGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred cCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 367777888999999999999998 99999999554 33 355566777873
No 193
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=55.93 E-value=8 Score=37.27 Aligned_cols=91 Identities=16% Similarity=0.159 Sum_probs=50.4
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh----hcceEeecC
Q 010523 229 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE----KADGFAGVF 304 (508)
Q Consensus 229 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~a~~~ 304 (508)
-++..++++.+++.|++. ++|......+.......|... +...++ +......-.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~---------------------~~~~i~~~g~~~~~~gKP~ 197 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGY---------------------YAELIKQLGGKVIYSGKPY 197 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccH---------------------HHHHHHHhCCcEecCCCCC
Confidence 378888999998899997 777765543332222222210 000000 000122223
Q ss_pred hhhHHHHHHHHhhc-CCEEEEEcCC-CCChhhhhcCCee
Q 010523 305 PEHKYEIVKHLQAR-NHICGMIGNG-VNDAPALKKADIG 341 (508)
Q Consensus 305 P~~K~~iV~~l~~~-g~~v~~vGDG-~ND~~al~~AdvG 341 (508)
|+-=..+.+.+... ...++||||. .+|..+=+.|++-
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 33223344444332 3479999999 5999998888874
No 194
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=54.87 E-value=14 Score=31.35 Aligned_cols=39 Identities=26% Similarity=0.373 Sum_probs=29.8
Q ss_pred CCcchHHHHHHHHhCCCc-EEEEcCCcHHHHHHHHHHhCC
Q 010523 228 PIHDSAETIRRALSLGLG-VKMITGDQLAIAKETGRRLGM 266 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~-v~mlTGD~~~~a~~ia~~lgi 266 (508)
+.+.+.+.+++|.+.|++ +|+.+|...+.+.+.+++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 345788999999999996 899999999999999999887
No 195
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=52.39 E-value=75 Score=28.94 Aligned_cols=106 Identities=19% Similarity=0.170 Sum_probs=66.4
Q ss_pred chHHHHHHHHhCCCcEEEEcCCcHH-HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHH
Q 010523 231 DSAETIRRALSLGLGVKMITGDQLA-IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKY 309 (508)
Q Consensus 231 ~~~~~I~~l~~~Gi~v~mlTGD~~~-~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~ 309 (508)
|...++.+++..|-++.+++=.+.. ....+...+|+. ...+.--++++=.
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~-----------------------------i~~~~~~~~~e~~ 115 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD-----------------------------IKIYPYDSEEEIE 115 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E-----------------------------EEEEEESSHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc-----------------------------eEEEEECCHHHHH
Confidence 5566666666666677777655543 356666666662 2345556688888
Q ss_pred HHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHH-HhhcchhccCCChhHHHHHHHHHHHHHHHHHH
Q 010523 310 EIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAA-RSAADIVLTEPGLNVIITAVLISRAIFQRMRN 383 (508)
Q Consensus 310 ~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a-~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~ 383 (508)
..++.++..| .-+.+|++. ..+.| +.--..++...+..++..++.+++++.+..++
T Consensus 116 ~~i~~~~~~G-~~viVGg~~-----------------~~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 116 AAIKQAKAEG-VDVIVGGGV-----------------VCRLARKLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHTT---EEEESHH-----------------HHHHHHHTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC-CcEEECCHH-----------------HHHHHHHcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 8899998888 445677652 12222 23345677788899999999999998887664
No 196
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=52.13 E-value=72 Score=31.39 Aligned_cols=66 Identities=18% Similarity=0.059 Sum_probs=45.1
Q ss_pred HHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhC-CCcEEEEcCCcHHHHHHHHHH
Q 010523 187 NKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRR 263 (508)
Q Consensus 187 ~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~-Gi~v~mlTGD~~~~a~~ia~~ 263 (508)
+.+....-|.+.+=|+. -+.-+..-....++-++..+.++.|... ...|+|+||...+.......-
T Consensus 11 ~~~~~a~~~~~~lDyDG-----------Tl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v 77 (266)
T COG1877 11 EPYLNARKRLLFLDYDG-----------TLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGV 77 (266)
T ss_pred cccccccceEEEEeccc-----------cccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCC
Confidence 33444455666665544 2333444456677888999999999877 456999999999877766553
No 197
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=50.82 E-value=6.8 Score=35.75 Aligned_cols=14 Identities=36% Similarity=0.292 Sum_probs=12.7
Q ss_pred EEcccccccccCce
Q 010523 65 LCCDKTGTLTLNKL 78 (508)
Q Consensus 65 i~~DKTGTLT~n~m 78 (508)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 68999999999984
No 198
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=50.45 E-value=52 Score=32.41 Aligned_cols=43 Identities=14% Similarity=0.082 Sum_probs=29.6
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCee-EEec
Q 010523 303 VFPEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVA 345 (508)
Q Consensus 303 ~~P~~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~AdvG-Ia~~ 345 (508)
-+|+-=..+++.+.-....++||||.. .|..+-+.|++- |.+.
T Consensus 203 P~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~ 247 (279)
T TIGR01452 203 PSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVL 247 (279)
T ss_pred CCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEEC
Confidence 344433345555555567899999995 999999999973 4553
No 199
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=49.09 E-value=68 Score=29.23 Aligned_cols=40 Identities=18% Similarity=0.198 Sum_probs=31.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEEc-CCcHHHHHHHHHHhCCC
Q 010523 228 PIHDSAETIRRALSLGLGVKMIT-GDQLAIAKETGRRLGMG 267 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlT-GD~~~~a~~ia~~lgi~ 267 (508)
+-|++++.++.|+..|+++.++| -+.++.|+++-+.+++.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 45899999999999999999999 58899999999999996
No 200
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=47.36 E-value=39 Score=32.30 Aligned_cols=98 Identities=15% Similarity=0.109 Sum_probs=54.8
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+-||+.+.++.|+..|+++.++|+-+..++..--...+-..+.+...++ |+..+-. .....|+-
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~-~d~~~v~---------------~gKP~Pdi 156 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVL-GDDPEVK---------------NGKPDPDI 156 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCee-cCCcccc---------------CCCCCchH
Confidence 3459999999999999999999999766555433333311222333333 3222210 01122222
Q ss_pred HHHHHHHHhhcC-CEEEEEcCCCCChhhhhcCCee
Q 010523 308 KYEIVKHLQARN-HICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 308 K~~iV~~l~~~g-~~v~~vGDG~ND~~al~~AdvG 341 (508)
=....+.+.... ..|+++.|..+=..|-+.|+.=
T Consensus 157 ~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~ 191 (222)
T KOG2914|consen 157 YLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQ 191 (222)
T ss_pred HHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCe
Confidence 233334444444 5667777766666666666543
No 201
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=46.00 E-value=1.1e+02 Score=30.03 Aligned_cols=43 Identities=16% Similarity=0.339 Sum_probs=26.0
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCChhhh---hcCCe-eEEecCc
Q 010523 305 PEHKYEIVKHLQARNHICGMIGNGVNDAPAL---KKADI-GIAVADA 347 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al---~~Adv-GIa~~~~ 347 (508)
+++-.++++.+++.-..-+++|-|+|+.... ..++. |+-+|++
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~~~~~~~GADGvVVGSa 233 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQIKQIKGWNINGIVIGSA 233 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHhcCCCEEEECHH
Confidence 4445677788877655566789999955443 33322 4555543
No 202
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=44.56 E-value=65 Score=29.25 Aligned_cols=60 Identities=13% Similarity=0.174 Sum_probs=44.2
Q ss_pred hcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcC
Q 010523 172 LHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITG 251 (508)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTG 251 (508)
..++-.+..-+...++.+...|=-.++++.-. --+.+.++++.+++.|++|+-+||
T Consensus 89 i~NDy~yd~vFsRqveA~g~~GDvLigISTSG------------------------NS~nVl~Ai~~Ak~~gm~vI~ltG 144 (176)
T COG0279 89 IANDYGYDEVFSRQVEALGQPGDVLIGISTSG------------------------NSKNVLKAIEAAKEKGMTVIALTG 144 (176)
T ss_pred hhccccHHHHHHHHHHhcCCCCCEEEEEeCCC------------------------CCHHHHHHHHHHHHcCCEEEEEec
Confidence 33444556667777888888887666665432 235889999999999999999999
Q ss_pred CcHH
Q 010523 252 DQLA 255 (508)
Q Consensus 252 D~~~ 255 (508)
.+--
T Consensus 145 ~~GG 148 (176)
T COG0279 145 KDGG 148 (176)
T ss_pred CCCc
Confidence 9854
No 203
>PLN02151 trehalose-phosphatase
Probab=43.96 E-value=35 Score=35.07 Aligned_cols=62 Identities=21% Similarity=0.234 Sum_probs=42.9
Q ss_pred hHHHHHHHHhhc-C------CEEEEEcCCCCChhhhhcC-----CeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR-N------HICGMIGNGVNDAPALKKA-----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~-g------~~v~~vGDG~ND~~al~~A-----dvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
+|...|+.+.+. + ..++++||...|-.||+.. ++||-++.+.. ...|++.|.+ -+.+...+.
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~d--p~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQE--PDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCCC--HHHHHHHHH
Confidence 788888877654 2 2589999999999999853 67777763221 2367888854 666655554
No 204
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=41.67 E-value=2.2e+02 Score=24.21 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=24.6
Q ss_pred HHHHHHHhhcCCEEEEEcCCCC--ChhhhhcCCeeEEec
Q 010523 309 YEIVKHLQARNHICGMIGNGVN--DAPALKKADIGIAVA 345 (508)
Q Consensus 309 ~~iV~~l~~~g~~v~~vGDG~N--D~~al~~AdvGIa~~ 345 (508)
.++++.+. +-+.+...|-|.| |..++++-+|-++-.
T Consensus 52 ~~~l~~~~-~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 52 AEVLEAAP-NLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp HHHHHHHT-T-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred HHHHhccc-eeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 45566663 3357888999998 788888888877755
No 205
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=38.97 E-value=73 Score=30.74 Aligned_cols=67 Identities=18% Similarity=0.235 Sum_probs=45.8
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHH----------HHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcce
Q 010523 230 HDSAETIRRALSLGLGVKMITGDQLAIA----------KETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG 299 (508)
Q Consensus 230 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a----------~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 299 (508)
+-.++-|+.++++||+| .||+..... ...++++|+.. ++-.+.
T Consensus 41 ~~l~eki~la~~~~V~v--~~GGtl~E~~~~q~~~~~Yl~~~k~lGf~~-------------------------IEiS~G 93 (237)
T TIGR03849 41 DIVKEKIEMYKDYGIKV--YPGGTLFEIAHSKGKFDEYLNECDELGFEA-------------------------VEISDG 93 (237)
T ss_pred HHHHHHHHHHHHcCCeE--eCCccHHHHHHHhhhHHHHHHHHHHcCCCE-------------------------EEEcCC
Confidence 45788999999998875 589754221 22556666632 111134
Q ss_pred EeecChhhHHHHHHHHhhcCCEEE
Q 010523 300 FAGVFPEHKYEIVKHLQARNHICG 323 (508)
Q Consensus 300 ~a~~~P~~K~~iV~~l~~~g~~v~ 323 (508)
+-.+++++|.++|+..++.|-+|.
T Consensus 94 ~~~i~~~~~~rlI~~~~~~g~~v~ 117 (237)
T TIGR03849 94 SMEISLEERCNLIERAKDNGFMVL 117 (237)
T ss_pred ccCCCHHHHHHHHHHHHhCCCeEe
Confidence 567889999999999999887765
No 206
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=38.92 E-value=1.5e+02 Score=28.84 Aligned_cols=84 Identities=12% Similarity=0.045 Sum_probs=51.3
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHH----HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeec
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAI----AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 303 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~----a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 303 (508)
+=||+.+.++..-+.|..|.-+|-+..+. .+.--++.|++...-+. -++-+
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~------------------------~llkk- 177 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESH------------------------LLLKK- 177 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccc------------------------eEEee-
Confidence 45799999999999999999999887654 34445566775321111 11111
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhh
Q 010523 304 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 336 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~ 336 (508)
.-..|..--+.++.--.+|+.+||..+|-....
T Consensus 178 ~~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~ 210 (274)
T COG2503 178 DKKSKEVRRQAVEKDYKIVMLVGDNLDDFGDNA 210 (274)
T ss_pred CCCcHHHHHHHHhhccceeeEecCchhhhcchh
Confidence 111222222333334567888999998876543
No 207
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=38.48 E-value=2.8e+02 Score=26.93 Aligned_cols=51 Identities=25% Similarity=0.292 Sum_probs=44.5
Q ss_pred CCCcEEEEEeccCCCCCcchHHHHHHHHhC---CCcEEEEcCCcHHHHHHHHHH
Q 010523 213 GSPWQFIGLIPLFDPPIHDSAETIRRALSL---GLGVKMITGDQLAIAKETGRR 263 (508)
Q Consensus 213 e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~---Gi~v~mlTGD~~~~a~~ia~~ 263 (508)
+.+|.=+=+++=.+-+-||..++|+.++.. |..|+-.+-|++..|++++.-
T Consensus 90 ~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 90 GTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred CCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 678888888888888999999999999999 999987888888888888764
No 208
>PLN02591 tryptophan synthase
Probab=36.78 E-value=1.6e+02 Score=28.61 Aligned_cols=42 Identities=14% Similarity=0.191 Sum_probs=27.2
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCC---ChhhhhcC-CeeEEecC
Q 010523 305 PEHKYEIVKHLQARNHICGMIGNGVN---DAPALKKA-DIGIAVAD 346 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~~v~~vGDG~N---D~~al~~A-dvGIa~~~ 346 (508)
|++-.+.++.+++....-+++|-|++ |+..+... -=|+-+|+
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVGS 219 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGADGVIVGS 219 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCCEEEECH
Confidence 55556778888887666778899998 55554443 12455544
No 209
>PRK00208 thiG thiazole synthase; Reviewed
Probab=36.53 E-value=3.2e+02 Score=26.57 Aligned_cols=52 Identities=25% Similarity=0.263 Sum_probs=44.3
Q ss_pred CCCCcEEEEEeccCCCCCcchHHHHHHHHhC---CCcEEEEcCCcHHHHHHHHHH
Q 010523 212 SGSPWQFIGLIPLFDPPIHDSAETIRRALSL---GLGVKMITGDQLAIAKETGRR 263 (508)
Q Consensus 212 ~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~---Gi~v~mlTGD~~~~a~~ia~~ 263 (508)
.+.+|.=+=+++=.+-+-||..++++.++.. |..|+=.+-|++..|++++.-
T Consensus 89 ~~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 89 LGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred hCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 3678888888888888999999999999999 999986777888888887764
No 210
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=36.09 E-value=28 Score=33.29 Aligned_cols=57 Identities=25% Similarity=0.345 Sum_probs=28.3
Q ss_pred hhHHHHHHHHhhc-C------CEEEEEcCCCCChhhhhcC------CeeEEecCch-HHHHhhcchhccCC
Q 010523 306 EHKYEIVKHLQAR-N------HICGMIGNGVNDAPALKKA------DIGIAVADAT-DAARSAADIVLTEP 362 (508)
Q Consensus 306 ~~K~~iV~~l~~~-g------~~v~~vGDG~ND~~al~~A------dvGIa~~~~~-~~a~~aADivl~~~ 362 (508)
..|...|+.+-+. + ..++++||...|-.||+.. +++|-++..+ ..-..+|++-+.++
T Consensus 164 ~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 164 VNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp --HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred CChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccccC
Confidence 3488888877654 3 3799999999999999863 5677777532 22335666666554
No 211
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=35.27 E-value=1.9e+02 Score=28.24 Aligned_cols=39 Identities=15% Similarity=0.247 Sum_probs=23.8
Q ss_pred CCCCcchHHHHHHHHhCCCcE-EEEcCCcH-HHHHHHHHHh
Q 010523 226 DPPIHDSAETIRRALSLGLGV-KMITGDQL-AIAKETGRRL 264 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v-~mlTGD~~-~~a~~ia~~l 264 (508)
|.+-++..+.++.+++.|+.. .+++-... +....++...
T Consensus 123 Dlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 123 DLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred CCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 334467778888888888874 45555443 3445555543
No 212
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=34.16 E-value=1e+02 Score=30.73 Aligned_cols=38 Identities=24% Similarity=0.264 Sum_probs=27.1
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHH-HHHHHhCCC
Q 010523 230 HDSAETIRRALSLGLGVKMITGDQLAIAK-ETGRRLGMG 267 (508)
Q Consensus 230 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~-~ia~~lgi~ 267 (508)
+++...-+.|+..|.+++++|......+. ...+.++..
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 35666678888999999999987765444 455555553
No 213
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=33.83 E-value=49 Score=31.69 Aligned_cols=47 Identities=26% Similarity=0.280 Sum_probs=33.3
Q ss_pred EEeccCCCCCcchHHHHHHHHhCCCcEEEEc---CCcHHHHH-HHHHHhCC
Q 010523 220 GLIPLFDPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAK-ETGRRLGM 266 (508)
Q Consensus 220 G~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlT---GD~~~~a~-~ia~~lgi 266 (508)
|++.-.+.+=+++.++|+.+++.|++++++| |....... .+.+..|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 4455556666799999999999999999999 55544333 33333566
No 214
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=33.69 E-value=67 Score=31.98 Aligned_cols=48 Identities=25% Similarity=0.377 Sum_probs=39.7
Q ss_pred EEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHH---HhCCC
Q 010523 220 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR---RLGMG 267 (508)
Q Consensus 220 G~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~---~lgi~ 267 (508)
|++...+.+=|++.++++.|+..|-++.++|.....+-...++ .+|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 6777788999999999999999999999999888766666554 45663
No 215
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=33.23 E-value=26 Score=31.46 Aligned_cols=27 Identities=33% Similarity=0.395 Sum_probs=23.8
Q ss_pred HHHhccccEEEcccccccccCceEEEe
Q 010523 56 IVDMAGMDVLCCDKTGTLTLNKLTVDK 82 (508)
Q Consensus 56 lE~l~~i~~i~~DKTGTLT~n~m~v~~ 82 (508)
.+.+..+.-+++|--||||.|++-+..
T Consensus 2 ~~ra~~IkLli~DVDGvLTDG~ly~~~ 28 (170)
T COG1778 2 IARAKNIKLLILDVDGVLTDGKLYYDE 28 (170)
T ss_pred hhhhhhceEEEEeccceeecCeEEEcC
Confidence 467889999999999999999998754
No 216
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=33.18 E-value=3.8e+02 Score=30.60 Aligned_cols=45 Identities=11% Similarity=-0.217 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--ccccHHHHHHHH
Q 010523 372 LISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLDTVIAIL 416 (508)
Q Consensus 372 ~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~~~--~~~pl~~~~~l~ 416 (508)
+.-+.+.+|+...+.|++..+..++++.+.+++ ..++.+++.++.
T Consensus 685 ~~~~~I~~nl~~a~~~n~~~i~~a~~g~~~~~~a~~~~~~ss~~v~~ 731 (741)
T PRK11033 685 ATHANIRQNITIALGLKAIFLVTTLLGITGLWLAVLADSGATALVTA 731 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHcChHHHHHH
Confidence 345789999999999999999999888777765 345555555543
No 217
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=32.94 E-value=92 Score=24.24 Aligned_cols=47 Identities=15% Similarity=0.295 Sum_probs=36.5
Q ss_pred EeccCCCCCcchHHHHHHHHhCCCcEEE-EcCCcHHHHHHHHHHhCCC
Q 010523 221 LIPLFDPPIHDSAETIRRALSLGLGVKM-ITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 221 ~i~l~D~~r~~~~~~I~~l~~~Gi~v~m-lTGD~~~~a~~ia~~lgi~ 267 (508)
++++.+..++.+.+..+.|++.|+.|.+ ..+.+...-...|...|++
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445566778888999999999999988 5666677777788888874
No 218
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=32.87 E-value=76 Score=26.92 Aligned_cols=79 Identities=15% Similarity=0.123 Sum_probs=52.0
Q ss_pred HHHHccCeeEEEEeeecCCCCc--cCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCC-cE-EEEcCCcHHHHHHHHHH
Q 010523 188 KFAERGLRSLAVAYQEVPEGSK--ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GV-KMITGDQLAIAKETGRR 263 (508)
Q Consensus 188 ~~a~~Glr~l~vA~~~~~~~~~--~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi-~v-~mlTGD~~~~a~~ia~~ 263 (508)
-+...|++++..... +|.++. .-.+.+-.++++-.......+.+++.++.|++.|. ++ +++-|..+..-.+-.++
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~ 100 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKE 100 (122)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHH
Confidence 467889998888754 232211 11123346788888888888999999999999977 44 44555544433555667
Q ss_pred hCCC
Q 010523 264 LGMG 267 (508)
Q Consensus 264 lgi~ 267 (508)
.|+.
T Consensus 101 ~G~d 104 (122)
T cd02071 101 MGVA 104 (122)
T ss_pred CCCC
Confidence 8874
No 219
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.74 E-value=1.4e+02 Score=29.93 Aligned_cols=63 Identities=14% Similarity=0.249 Sum_probs=37.6
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCCCC---Ch-hhhh------cCCeeEEecCch--HHHHhhcchhccCC
Q 010523 300 FAGVFPEHKYEIVKHLQA--RNHICGMIGNGVN---DA-PALK------KADIGIAVADAT--DAARSAADIVLTEP 362 (508)
Q Consensus 300 ~a~~~P~~K~~iV~~l~~--~g~~v~~vGDG~N---D~-~al~------~AdvGIa~~~~~--~~a~~aADivl~~~ 362 (508)
|.=|||.-=.++++..+. .|..|+++|.+.. =. .||. .|.|-++-.... ...-..||+++..-
T Consensus 138 ~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~Av 214 (295)
T PRK14174 138 FVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAAI 214 (295)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEec
Confidence 444667665555555543 3899999999853 22 2332 356666655332 33446789997653
No 220
>PRK15108 biotin synthase; Provisional
Probab=32.69 E-value=4.5e+02 Score=26.83 Aligned_cols=116 Identities=11% Similarity=0.074 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCC-CC--cchHHHHHHHHhCCCcEEEEcCCcHHH
Q 010523 180 RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDP-PI--HDSAETIRRALSLGLGVKMITGDQLAI 256 (508)
Q Consensus 180 ~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~-~r--~~~~~~I~~l~~~Gi~v~mlTGD~~~~ 256 (508)
+++.+........|.+-++ +..+..+| .+ +...+.++.+++.|+.+.+--|.-...
T Consensus 79 eEI~~~a~~~~~~G~~~i~---------------------i~~~g~~p~~~~~e~i~~~i~~ik~~~i~v~~s~G~ls~e 137 (345)
T PRK15108 79 EQVLESARKAKAAGSTRFC---------------------MGAAWKNPHERDMPYLEQMVQGVKAMGLETCMTLGTLSES 137 (345)
T ss_pred HHHHHHHHHHHHcCCCEEE---------------------EEecCCCCCcchHHHHHHHHHHHHhCCCEEEEeCCcCCHH
Confidence 4555556666677876433 22232344 33 567788888888888876544544444
Q ss_pred HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEE---EEcCCCCCh
Q 010523 257 AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICG---MIGNGVNDA 332 (508)
Q Consensus 257 a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~---~vGDG~ND~ 332 (508)
...--++.|++.-... +.. ..+.. ..++..-+.+++.+.++.+++.|..+. ++|=|..+-
T Consensus 138 ~l~~LkeAGld~~n~~---leT-----------~p~~f--~~I~~~~~~~~rl~~i~~a~~~G~~v~sg~i~GlgEt~e 200 (345)
T PRK15108 138 QAQRLANAGLDYYNHN---LDT-----------SPEFY--GNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVK 200 (345)
T ss_pred HHHHHHHcCCCEEeec---ccc-----------ChHhc--CCCCCCCCHHHHHHHHHHHHHcCCceeeEEEEeCCCCHH
Confidence 4444456677421000 000 00000 023344467778888888888776543 677766543
No 221
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=31.56 E-value=5.9e+02 Score=27.87 Aligned_cols=70 Identities=16% Similarity=0.192 Sum_probs=52.8
Q ss_pred chHHHHHHHHhCCCcEEEEcCCcH-HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHH
Q 010523 231 DSAETIRRALSLGLGVKMITGDQL-AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKY 309 (508)
Q Consensus 231 ~~~~~I~~l~~~Gi~v~mlTGD~~-~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~ 309 (508)
|+..++..+++.+-++.+++=.+. ..+..++.-+++. ...+.-.++++-.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~-----------------------------i~~~~~~~~~e~~ 145 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR-----------------------------IEQRSYVTEEDAR 145 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 677788888888778888876664 5666777777763 2357777888889
Q ss_pred HHHHHHhhcCCEEEEEcCCCC
Q 010523 310 EIVKHLQARNHICGMIGNGVN 330 (508)
Q Consensus 310 ~iV~~l~~~g~~v~~vGDG~N 330 (508)
..|+.+++.|..+ .+||+.-
T Consensus 146 ~~v~~lk~~G~~~-vvG~~~~ 165 (538)
T PRK15424 146 GQINELKANGIEA-VVGAGLI 165 (538)
T ss_pred HHHHHHHHCCCCE-EEcCchH
Confidence 9999999998654 6798864
No 222
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=31.39 E-value=3.9e+02 Score=24.09 Aligned_cols=93 Identities=13% Similarity=0.210 Sum_probs=55.0
Q ss_pred HHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH
Q 010523 182 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG 261 (508)
Q Consensus 182 ~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia 261 (508)
++...+.++..|--+..-+|..- + .....++.|+..|++++...|+ ...+..+-
T Consensus 43 ~~~i~~~ls~~G~i~~~R~Y~~a-------------~------------a~~~l~~~l~~~Gf~pv~~kG~-~Dv~laID 96 (160)
T TIGR00288 43 LDEIREILSEYGDIKIGKVLLNQ-------------Y------------ASDKLIEAVVNQGFEPIIVAGD-VDVRMAVE 96 (160)
T ss_pred HHHHHHHHHhcCCeEEEEEEech-------------h------------ccHHHHHHHHHCCceEEEecCc-ccHHHHHH
Confidence 45566777888876666666430 0 0124578889999999888883 22222211
Q ss_pred H--HhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh-hHHHHHHHHhhcCCEEEEEcCC
Q 010523 262 R--RLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE-HKYEIVKHLQARNHICGMIGNG 328 (508)
Q Consensus 262 ~--~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~-~K~~iV~~l~~~g~~v~~vGDG 328 (508)
. .+ .. .+.+.|+=+|-+ +=..+++.++++|..|..+|-.
T Consensus 97 ame~~-~~---------------------------~~iD~~vLvSgD~DF~~Lv~~lre~G~~V~v~g~~ 138 (160)
T TIGR00288 97 AMELI-YN---------------------------PNIDAVALVTRDADFLPVINKAKENGKETIVIGAE 138 (160)
T ss_pred HHHHh-cc---------------------------CCCCEEEEEeccHhHHHHHHHHHHCCCEEEEEeCC
Confidence 1 11 00 122345544433 3356889999999999888854
No 223
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=30.71 E-value=5e+02 Score=26.03 Aligned_cols=30 Identities=17% Similarity=0.349 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHHHHccCeeEEEEeeecCC
Q 010523 177 KIGRKVNAVINKFAERGLRSLAVAYQEVPE 206 (508)
Q Consensus 177 ~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~ 206 (508)
.+-.+++..+.++.++|+.++.+..++-|+
T Consensus 97 P~V~k~~~~v~~~~~~Gy~vvi~G~~~HpE 126 (298)
T PRK01045 97 PLVTKVHKEVARMSREGYEIILIGHKGHPE 126 (298)
T ss_pred ccchHHHHHHHHHHhCCCEEEEEeCCCCCe
Confidence 345678889999999999999999877663
No 224
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=30.63 E-value=3.5e+02 Score=27.18 Aligned_cols=24 Identities=21% Similarity=0.224 Sum_probs=21.5
Q ss_pred CcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 244 LGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 244 i~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
+..+|+-|...++..++|+..+++
T Consensus 100 ~D~I~~R~~~~~~ve~lA~~s~VP 123 (310)
T COG0078 100 VDAIMIRGFSHETLEELAKYSGVP 123 (310)
T ss_pred hheEEEecccHHHHHHHHHhCCCc
Confidence 677899999999999999998885
No 225
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.06 E-value=1e+02 Score=30.58 Aligned_cols=64 Identities=16% Similarity=0.282 Sum_probs=37.3
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcC-CCCChh---hhhcCCeeEEec-C-ch--HHHHhhcchhccCCC
Q 010523 300 FAGVFPEHKYEIVKHLQA--RNHICGMIGN-GVNDAP---ALKKADIGIAVA-D-AT--DAARSAADIVLTEPG 363 (508)
Q Consensus 300 ~a~~~P~~K~~iV~~l~~--~g~~v~~vGD-G~ND~~---al~~AdvGIa~~-~-~~--~~a~~aADivl~~~~ 363 (508)
|.=+||.-=.++++.... .|..++++|- |.-=.| +|..++.-+.+. + .. ...-..||+|+.--+
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~avg 210 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVAIG 210 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEecC
Confidence 445666655555555433 4889999999 554444 455565555553 2 21 223467899976533
No 226
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=29.91 E-value=40 Score=32.08 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=29.7
Q ss_pred HHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 233 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 233 ~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
.++++ +++.|++++++||+....+..+...+++.
T Consensus 21 ~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 21 VELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred HHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence 35555 68899999999999999999999999884
No 227
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=29.90 E-value=5.6e+02 Score=25.40 Aligned_cols=138 Identities=14% Similarity=0.151 Sum_probs=75.7
Q ss_pred hHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc------------------cCCCCCcEEEEEeccCCCCCcchHHHHHH
Q 010523 177 KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK------------------ESSGSPWQFIGLIPLFDPPIHDSAETIRR 238 (508)
Q Consensus 177 ~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~------------------~~~e~~l~~lG~i~l~D~~r~~~~~~I~~ 238 (508)
.+-.+++..+.++.++|+.++.+..++-||-.- +.+. ...-+|++.=.-..+.+..+.++.
T Consensus 97 P~V~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~l~-~~~~v~vvsQTT~~~~~~~~i~~~ 175 (280)
T TIGR00216 97 PLVTKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLEDLENFK-VEDLLGVVSQTTLSQEDTKEIVAE 175 (280)
T ss_pred cccHHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHHHHHhCC-CCCcEEEEEcCCCcHHHHHHHHHH
Confidence 345678899999999999999999887664210 0000 001134444333344445555555
Q ss_pred HHhCC--C------cEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHH
Q 010523 239 ALSLG--L------GVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYE 310 (508)
Q Consensus 239 l~~~G--i------~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~ 310 (508)
|++.. . .++-.|-+.++.+.++|+++.+. .+..+-....=..
T Consensus 176 l~~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~m------------------------------iVVGg~nSsNT~r 225 (280)
T TIGR00216 176 LKARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLM------------------------------IVIGGKNSSNTTR 225 (280)
T ss_pred HHHhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEE------------------------------EEECCCCCchHHH
Confidence 54433 1 13344555555555555543331 1233333333345
Q ss_pred HHHHHhhcCCEEEEEcCCC-CChhhhhcCC-eeEEec
Q 010523 311 IVKHLQARNHICGMIGNGV-NDAPALKKAD-IGIAVA 345 (508)
Q Consensus 311 iV~~l~~~g~~v~~vGDG~-ND~~al~~Ad-vGIa~~ 345 (508)
+.+..++.|..+..+.+-. -|...|+.++ |||.-|
T Consensus 226 L~ei~~~~~~~t~~Ie~~~el~~~~l~~~~~VGiTAG 262 (280)
T TIGR00216 226 LYEIAEEHGPPSYLIETAEELPEEWLKGVKVVGITAG 262 (280)
T ss_pred HHHHHHHhCCCEEEECChHHCCHHHhCCCCEEEEEec
Confidence 6666777777777777642 3556777654 577766
No 228
>COG3707 AmiR Response regulator with putative antiterminator output domain [Signal transduction mechanisms]
Probab=29.37 E-value=2.1e+02 Score=26.61 Aligned_cols=79 Identities=13% Similarity=0.033 Sum_probs=56.8
Q ss_pred HHHHHHccCeeEEEEeeecCCC-CccCCCCCcEEEEEeccCCCCCcchHHHHHHH-HhCCCcEEEEcCCcHHHHHHHHHH
Q 010523 186 INKFAERGLRSLAVAYQEVPEG-SKESSGSPWQFIGLIPLFDPPIHDSAETIRRA-LSLGLGVKMITGDQLAIAKETGRR 263 (508)
Q Consensus 186 ~~~~a~~Glr~l~vA~~~~~~~-~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l-~~~Gi~v~mlTGD~~~~a~~ia~~ 263 (508)
.+.+...|+.+++++...+... .......|+. ++.+++|-|+ ..+..-.+ +..+-.++|+|+-+.....+.+..
T Consensus 22 ~~~l~eag~~~Vg~~~~~~~~~~~~~~~~pDvV---ildie~p~rd-~~e~~~~~~~~~~~piv~lt~~s~p~~i~~a~~ 97 (194)
T COG3707 22 REGLLEAGYQRVGEAADGLEAVEVCERLQPDVV---ILDIEMPRRD-IIEALLLASENVARPIVALTAYSDPALIEAAIE 97 (194)
T ss_pred HHHHHHcCCeEeeeecccccchhHHHhcCCCEE---EEecCCCCcc-HHHHHHHhhcCCCCCEEEEEccCChHHHHHHHH
Confidence 3567789999999998776332 2333344544 4678899888 55555444 446778999999999888899998
Q ss_pred hCCCC
Q 010523 264 LGMGT 268 (508)
Q Consensus 264 lgi~~ 268 (508)
.|...
T Consensus 98 ~Gv~a 102 (194)
T COG3707 98 AGVMA 102 (194)
T ss_pred cCCeE
Confidence 88743
No 229
>PLN02645 phosphoglycolate phosphatase
Probab=29.22 E-value=73 Score=31.96 Aligned_cols=59 Identities=10% Similarity=0.112 Sum_probs=36.8
Q ss_pred HHHHHhhcCCEEEEEcCCC-CChhhhhcCCe-eEEecCc----hHHHH----hhcchhccCCChhHHHHHH
Q 010523 311 IVKHLQARNHICGMIGNGV-NDAPALKKADI-GIAVADA----TDAAR----SAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 311 iV~~l~~~g~~v~~vGDG~-ND~~al~~Adv-GIa~~~~----~~~a~----~aADivl~~~~l~~i~~~i 371 (508)
+.+.+.-....++||||.. +|..+-+.|++ +|.+..| .+... ..+|+++ +++..+.+.+
T Consensus 239 a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~--~~~~~l~~~~ 307 (311)
T PLN02645 239 LANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYT--SKISDFLTLK 307 (311)
T ss_pred HHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEE--CCHHHHHHHh
Confidence 4444444567899999997 99999999996 3444322 22211 2467777 4466665543
No 230
>PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds []. Coenzyme M (CoM; 2-mercaptoethanesulphonic acid) serves as the terminal methyl carrier for this process. Previously thought to be unique to methanogenic archaea, CoM has also been found in methylotrophic bacteria. Biosynthesis of CoM begins with the Michael addition of sulphite to phosphoenolpyruvate, forming 2-phospho-3-sulpholactate (PSL). This reaction is catalyzed by members of this family, PSL synthase (ComA) []. Subsequently, PSL is dephosphorylated by phosphosulpholactate phosphatase (ComB) to form 3-sulpholactate [], which is then converted to 3-sulphopyruvate by L-sulpholactate dehydrogenase (ComC; 1.1.1.272 from EC) []. Sulphopyruvate decarboxylase (ComDE; 4.1.1.79 from EC) converts 3-sulphopyruvate to sulphoacetaldehyde []. Reductive thiolation of sulphoacetaldehyde is the final step.; GO: 0019295 coenzyme M biosynthetic process; PDB: 1U83_A 1QWG_A.
Probab=29.09 E-value=76 Score=30.76 Aligned_cols=110 Identities=23% Similarity=0.218 Sum_probs=60.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH----------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLA----------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 297 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~----------~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
+++-.++-|+.++++||.| .+|.... .-...++++|+.. ++-.
T Consensus 52 ~~~~l~eki~l~~~~gV~v--~~GGtl~E~a~~q~~~~~yl~~~k~lGf~~-------------------------IEiS 104 (244)
T PF02679_consen 52 PEEILKEKIDLAHSHGVYV--YPGGTLFEVAYQQGKFDEYLEECKELGFDA-------------------------IEIS 104 (244)
T ss_dssp TCHHHHHHHHHHHCTT-EE--EE-HHHHHHHHHTT-HHHHHHHHHHCT-SE-------------------------EEE-
T ss_pred CHHHHHHHHHHHHHcCCeE--eCCcHHHHHHHhcChHHHHHHHHHHcCCCE-------------------------EEec
Confidence 3555889999999998875 5887653 3344566677631 1111
Q ss_pred ceEeecChhhHHHHHHHHhhcCCEEEE-EcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhH
Q 010523 298 DGFAGVFPEHKYEIVKHLQARNHICGM-IGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV 366 (508)
Q Consensus 298 ~v~a~~~P~~K~~iV~~l~~~g~~v~~-vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~ 366 (508)
+.+-.+++++|.++|+..++.|-.|.. +| .-|...-..-++.--+..+......-||.|+.+.+-++
T Consensus 105 dGti~l~~~~r~~~I~~~~~~Gf~v~~EvG--~K~~~~~~~~~~~~~i~~~~~dLeAGA~~ViiEarEsG 172 (244)
T PF02679_consen 105 DGTIDLPEEERLRLIRKAKEEGFKVLSEVG--KKDPESDFSLDPEELIEQAKRDLEAGADKVIIEARESG 172 (244)
T ss_dssp -SSS---HHHHHHHHHHHCCTTSEEEEEES---SSHHHHTT--CCHHHHHHHHHHHHTECEEEE--TTT-
T ss_pred CCceeCCHHHHHHHHHHHHHCCCEEeeccc--CCCchhcccCCHHHHHHHHHHHHHCCCCEEEEeeeccC
Confidence 235578899999999999999987754 77 33443333322322223334445556888888765443
No 231
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=28.60 E-value=67 Score=26.90 Aligned_cols=80 Identities=16% Similarity=0.260 Sum_probs=52.7
Q ss_pred HHHHHccCeeEEEEeeecCCCCc--cCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCC-cE-EEEcCCcHHHHHHHHH
Q 010523 187 NKFAERGLRSLAVAYQEVPEGSK--ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GV-KMITGDQLAIAKETGR 262 (508)
Q Consensus 187 ~~~a~~Glr~l~vA~~~~~~~~~--~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi-~v-~mlTGD~~~~a~~ia~ 262 (508)
.-+...|++|+.+..+ +|.++. .-.+.+..++|+-...++.-+.+++.++.+++.+- ++ +++-|-....-...++
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~ 99 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLK 99 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHH
Confidence 3456789999776632 332221 11234557888888877777999999999999976 54 5666655443345777
Q ss_pred HhCCC
Q 010523 263 RLGMG 267 (508)
Q Consensus 263 ~lgi~ 267 (508)
..|.+
T Consensus 100 ~~G~D 104 (119)
T cd02067 100 EIGVD 104 (119)
T ss_pred HcCCe
Confidence 77763
No 232
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=28.32 E-value=94 Score=24.60 Aligned_cols=49 Identities=18% Similarity=0.266 Sum_probs=37.6
Q ss_pred EEEeccCC---CCCcchHHHHHHHHhCCCcEEEE-cCCcHHHHHHHHHHhCCC
Q 010523 219 IGLIPLFD---PPIHDSAETIRRALSLGLGVKMI-TGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 219 lG~i~l~D---~~r~~~~~~I~~l~~~Gi~v~ml-TGD~~~~a~~ia~~lgi~ 267 (508)
+.++++.+ ...+-+.+..+.|+++|+.+.+- ++++......-|...|++
T Consensus 2 v~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 2 VVIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 34566666 66677888899999999998887 556667777888888874
No 233
>COG4996 Predicted phosphatase [General function prediction only]
Probab=28.00 E-value=1.3e+02 Score=26.28 Aligned_cols=57 Identities=19% Similarity=0.135 Sum_probs=47.3
Q ss_pred CCCCCcEEEEEeccCCC------CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 211 SSGSPWQFIGLIPLFDP------PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 211 ~~e~~l~~lG~i~l~D~------~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
+.+.+++.+.-..++|. ++++++++++.+++.|+-+-.+|=.....|...-+.+++.
T Consensus 19 sl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~ 81 (164)
T COG4996 19 SLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLL 81 (164)
T ss_pred hcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchh
Confidence 34556666666666664 7899999999999999999999999999999998988884
No 234
>PRK13671 hypothetical protein; Provisional
Probab=27.60 E-value=2.3e+02 Score=28.43 Aligned_cols=96 Identities=19% Similarity=0.235 Sum_probs=61.2
Q ss_pred EEEEeccCCCCCcchHHHHHHHHhC-CC--cEEEEcCCcHH----------HHHHHHHHhCCCCCCCCCccccCCchhhh
Q 010523 218 FIGLIPLFDPPIHDSAETIRRALSL-GL--GVKMITGDQLA----------IAKETGRRLGMGTNMYPSSALSGQDRDES 284 (508)
Q Consensus 218 ~lG~i~l~D~~r~~~~~~I~~l~~~-Gi--~v~mlTGD~~~----------~a~~ia~~lgi~~~~~~~~~~~~~~~~~~ 284 (508)
.+|+|+=+||+-.|=...++++++. +. -+++.+|+... .-.+++..+|.+ .
T Consensus 2 ~~GIIaeFNP~H~GHl~~~~~a~~~~~~d~vi~vpSg~~~qrg~pa~~~~~~R~~ma~~~G~D----------------L 65 (298)
T PRK13671 2 AIGIIAEYNPFHNGHIYQINYIKNKFPNEKIIVILSGKYTQRGEIAVASFEKRKKIALKYGVD----------------K 65 (298)
T ss_pred ceeEEeeeCCccHHHHHHHHHHHHhcCCCEEEEEECcCCCCCCCCCCCCHHHHHHHHHHcCCC----------------E
Confidence 3799999999999999999888873 33 46667888742 223456666653 1
Q ss_pred hhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhh
Q 010523 285 IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 336 (508)
Q Consensus 285 ~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~ 336 (508)
.-++|+.--+..++.|| ..-|+.|...|-..+++|.-.+|...|+
T Consensus 66 ViELP~~~a~~sAe~FA-------~gaV~lL~~lgvd~l~FGsE~~d~~~l~ 110 (298)
T PRK13671 66 VIKLPFEYATQAAHIFA-------KGAIKKLNKEKIDKLIFGSESNDIELMY 110 (298)
T ss_pred EEeccHHHHhhchHHHH-------HHHHHHHHHcCCCEEEECCCCCCHHHHH
Confidence 11222222222233333 2357777777766789999888876553
No 235
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.37 E-value=2.5e+02 Score=27.94 Aligned_cols=62 Identities=15% Similarity=0.180 Sum_probs=37.0
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCCCC----Chhhhhc------CCeeEEecCchH--HHHhhcchhccC
Q 010523 300 FAGVFPEHKYEIVKHLQA--RNHICGMIGNGVN----DAPALKK------ADIGIAVADATD--AARSAADIVLTE 361 (508)
Q Consensus 300 ~a~~~P~~K~~iV~~l~~--~g~~v~~vGDG~N----D~~al~~------AdvGIa~~~~~~--~a~~aADivl~~ 361 (508)
|.=|||.-=.++++.++- .|..+..+|-+.. =+.+|.. |.|-++-....+ ..-..||+++..
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVA 211 (286)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 455666655556655543 3889999998743 2334433 566666553322 244678988764
No 236
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=27.30 E-value=1e+02 Score=25.80 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=27.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCC
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 266 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi 266 (508)
--+++.++++.+++.|++++.+|++.. -...+.+.|.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 346888999999999999999998874 3334554443
No 237
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=26.82 E-value=2.2e+02 Score=27.22 Aligned_cols=108 Identities=11% Similarity=0.012 Sum_probs=69.7
Q ss_pred EEEEeccCCCCCcch--HHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh
Q 010523 218 FIGLIPLFDPPIHDS--AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 295 (508)
Q Consensus 218 ~lG~i~l~D~~r~~~--~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
.=|.++++| ++||- ++.+-.+++.+ .|+.|.-...-|..+-+.+||.+.. ...+..+-.. . .
T Consensus 90 V~~~LPlq~-LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcF-egii~~e~~n-----p--~----- 153 (244)
T KOG3109|consen 90 VHGRLPLQD-LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCF-EGIICFETLN-----P--I----- 153 (244)
T ss_pred hhccCcHhh-cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhc-cceeEeeccC-----C--C-----
Confidence 347778888 88875 45555555443 8999999999999999999995422 1111111000 0 0
Q ss_pred hcceEeecChhhHHHHHHHHhhc-CCEEEEEcCCCCChhhhhcCCee
Q 010523 296 KADGFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 296 ~~~v~a~~~P~~K~~iV~~l~~~-g~~v~~vGDG~ND~~al~~AdvG 341 (508)
+..++|..+|+-=....+...-. .+.+.++-|+.+.+..-++-+..
T Consensus 154 ~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~ 200 (244)
T KOG3109|consen 154 EKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLK 200 (244)
T ss_pred CCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccce
Confidence 12466766666444444444433 67899999999998887777653
No 238
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=24.98 E-value=3.1e+02 Score=27.93 Aligned_cols=85 Identities=19% Similarity=0.285 Sum_probs=62.1
Q ss_pred EeccCCCCCcchHHHHHHHH-hCCCcEEEEcCCc--HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc
Q 010523 221 LIPLFDPPIHDSAETIRRAL-SLGLGVKMITGDQ--LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 297 (508)
Q Consensus 221 ~i~l~D~~r~~~~~~I~~l~-~~Gi~v~mlTGD~--~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
+.++.|+-|-+...++.+.. ++|+.+.+--..- .+.++.+++.+||+. ..+..+-
T Consensus 219 vtAMhDaTrGGla~aLnEmA~aSgvgi~I~ee~Ipv~~eVr~vce~lGiDP----------------------l~~anEG 276 (339)
T COG0309 219 VTAMHDATRGGLAGALNEMAEASGVGISIEEEKIPVREEVRGVCELLGLDP----------------------LELANEG 276 (339)
T ss_pred hhhccCCchhHHHHHHHHHHHHcCCeEEEeeccccccHHHHHHHHHhCCCH----------------------HHhhcCc
Confidence 67799999999999998775 5677665544333 378899999999953 1222333
Q ss_pred ceEeecChhhHHHHHHHHhhcC-CEEEEEcC
Q 010523 298 DGFAGVFPEHKYEIVKHLQARN-HICGMIGN 327 (508)
Q Consensus 298 ~v~a~~~P~~K~~iV~~l~~~g-~~v~~vGD 327 (508)
.+.+-+.|++-.++++.|++.+ .....+|-
T Consensus 277 ~lv~~V~~~~a~~~l~~L~~~~~~~A~iIGe 307 (339)
T COG0309 277 KLVIAVPPEHAEEVLEALRSHGLKDAAIIGE 307 (339)
T ss_pred eEEEEECHHHHHHHHHHHHhcCCccceeEEE
Confidence 5678899998889999999988 44555553
No 239
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=24.58 E-value=1e+02 Score=30.64 Aligned_cols=155 Identities=14% Similarity=0.168 Sum_probs=79.8
Q ss_pred cCcHHHHHhhhc--------CChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCC-----cc---------------CCC
Q 010523 162 KGSPEQILNLLH--------NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS-----KE---------------SSG 213 (508)
Q Consensus 162 kGa~e~il~~~~--------~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~-----~~---------------~~e 213 (508)
-|.+..+.+... -+..+-.+++..+.+++++|+.++.+..++-||-. .. ...
T Consensus 72 HGv~~~~~~~l~~~g~~viDaTCP~V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~~vv~~~~~~~~l~~ 151 (281)
T PF02401_consen 72 HGVPPEVYEELKERGLEVIDATCPFVKKIHKIVRKYAKEGYQIVIIGDKNHPEVIGILGYAPEEKAIVVESPEDVEKLPI 151 (281)
T ss_dssp T---HHHHHHHHHTTEEEEE---HHHHHHHHHHHHHHHCT-EEEEES-TT-HHHHHHHCCHHTS-EEEESSHHHHHHGGG
T ss_pred CCCCHHHHHHHHHcCCEEEECCChhHHHHHHHHHHHHhcCCEEEEECCCCCceEEEecccccCCceEEeCChhhhcccCC
Confidence 466666655442 23345678899999999999999999876654311 00 000
Q ss_pred CCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEE--------EEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhh
Q 010523 214 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVK--------MITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESI 285 (508)
Q Consensus 214 ~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~--------mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~ 285 (508)
.+..-++++.=.--.+.+..+.++.|++..-.+. -.|-+.++.+.++|+++.+
T Consensus 152 ~~~~kv~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~aT~~RQ~a~~~La~~vD~------------------- 212 (281)
T PF02401_consen 152 SDPKKVAVVSQTTQSVEKFEEIVEALKKRFPELEGPVFNTICYATQNRQEAARELAKEVDA------------------- 212 (281)
T ss_dssp SSTTCEEEEE-TTS-HHHHHHHHHHHHHHSTCEE-SCC-S--CHHHHHHHHHHHHHCCSSE-------------------
T ss_pred CCCCeEEEEEeecccHHHHHHHHHHHHHhCccccCCCCCCCCHhHHHHHHHHHHHHhhCCE-------------------
Confidence 1112234444333445556666666665554443 2233444444444443322
Q ss_pred hcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcC-CeeEEecC
Q 010523 286 VALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKA-DIGIAVAD 346 (508)
Q Consensus 286 ~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~A-dvGIa~~~ 346 (508)
..+..+-....-..+.+..++.+..+..|.+-. =|...|+.+ .|||.-|-
T Consensus 213 -----------miVIGg~~SsNT~kL~eia~~~~~~t~~Ie~~~el~~~~l~~~~~VGItaGA 264 (281)
T PF02401_consen 213 -----------MIVIGGKNSSNTRKLAEIAKEHGKPTYHIETADELDPEWLKGVKKVGITAGA 264 (281)
T ss_dssp -----------EEEES-TT-HHHHHHHHHHHHCTTCEEEESSGGG--HHHHTT-SEEEEEE-T
T ss_pred -----------EEEecCCCCccHHHHHHHHHHhCCCEEEeCCccccCHhHhCCCCEEEEEccC
Confidence 124445555555677888888888888887642 234567777 67888773
No 240
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.29 E-value=1.3e+02 Score=30.02 Aligned_cols=45 Identities=11% Similarity=0.190 Sum_probs=31.6
Q ss_pred cCCCCCcchHHHHHHHHhCCCcE---EEEcCCcHHHHH------HHHHHhCCCC
Q 010523 224 LFDPPIHDSAETIRRALSLGLGV---KMITGDQLAIAK------ETGRRLGMGT 268 (508)
Q Consensus 224 l~D~~r~~~~~~I~~l~~~Gi~v---~mlTGD~~~~a~------~ia~~lgi~~ 268 (508)
+.+.++.+.++.++.++..|++. .++-||+++... ..|+++|+..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 44567788888899988878764 455788875543 4567788754
No 241
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=24.24 E-value=1.1e+02 Score=29.60 Aligned_cols=37 Identities=22% Similarity=0.234 Sum_probs=33.5
Q ss_pred hHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 010523 232 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 268 (508)
Q Consensus 232 ~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 268 (508)
..+.|.+|++.|+.|+=++-|.-.+=..+-+++|+.+
T Consensus 198 l~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 198 LKNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred HHHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 3678999999999999999999999999999999964
No 242
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=24.16 E-value=1.9e+02 Score=25.19 Aligned_cols=80 Identities=14% Similarity=0.161 Sum_probs=50.2
Q ss_pred HHHHccCeeEEEEeeecCCCC-ccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCC--cEEEEcCCc------HHHHH
Q 010523 188 KFAERGLRSLAVAYQEVPEGS-KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL--GVKMITGDQ------LAIAK 258 (508)
Q Consensus 188 ~~a~~Glr~l~vA~~~~~~~~-~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi--~v~mlTGD~------~~~a~ 258 (508)
-+...|+.|+.+....-++.- ..-.+.+-.++|+-++--.--+..+++++.|++.|+ .++++=|-. .....
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~ 103 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVE 103 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHH
Confidence 456789999888765432211 011133446888888777777788999999999987 345555531 11123
Q ss_pred HHHHHhCCC
Q 010523 259 ETGRRLGMG 267 (508)
Q Consensus 259 ~ia~~lgi~ 267 (508)
.-.+++|+.
T Consensus 104 ~~l~~~Gv~ 112 (134)
T TIGR01501 104 KRFKEMGFD 112 (134)
T ss_pred HHHHHcCCC
Confidence 456788863
No 243
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=24.13 E-value=2.1e+02 Score=29.08 Aligned_cols=146 Identities=18% Similarity=0.158 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHccCeeEEEEeeecCCCC--------ccCCCCCcEEEEEeccCCCCCcchHH--HHHHHHhCCCc--
Q 010523 178 IGRKVNAVINKFAERGLRSLAVAYQEVPEGS--------KESSGSPWQFIGLIPLFDPPIHDSAE--TIRRALSLGLG-- 245 (508)
Q Consensus 178 ~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~--------~~~~e~~l~~lG~i~l~D~~r~~~~~--~I~~l~~~Gi~-- 245 (508)
+-+....+++-+.+.|+.-+.++.|.-+... .+..+.+| -+|++-=-....--++. .|..|...||-
T Consensus 149 mveSAl~~v~~le~~~F~diviS~KsSdv~~~i~ayr~la~~~dyPL-HlGVTEAG~~~~G~IKSaigig~LL~~GIGDT 227 (346)
T TIGR00612 149 MVQSALEEAAILEKLGFRNVVLSMKASDVAETVAAYRLLAERSDYPL-HLGVTEAGMGVKGIVKSSAGIGILLARGIGDT 227 (346)
T ss_pred HHHHHHHHHHHHHHCCCCcEEEEEEcCCHHHHHHHHHHHHhhCCCCc-eeccccCCCCCCchhHHHHHHHHHHhhCCCCe
Confidence 4455567777888999999999987632111 11122233 25665444444433444 46888888883
Q ss_pred E-EEEcCCcH---HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh--hH-HHHHHHHhh-
Q 010523 246 V-KMITGDQL---AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE--HK-YEIVKHLQA- 317 (508)
Q Consensus 246 v-~mlTGD~~---~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~--~K-~~iV~~l~~- 317 (508)
+ +=+|+|.. ..|.++-+.||+-........ +--|.|+.-+ +- .++-+.++.
T Consensus 228 IRVSLT~dP~~EV~va~~IL~slglr~~g~~iiS---------------------CPtCGR~~~dl~~~~~~ve~~l~~~ 286 (346)
T TIGR00612 228 IRVSLTDDPTHEVPVAFEILQSLGLRARGVEIVA---------------------CPSCGRTGFDVEKVVRRVQEALFHL 286 (346)
T ss_pred EEEECCCCcHHHHHHHHHHHHHcCCCcCCCeEEE---------------------CCCCCCcCCCHHHHHHHHHHHHhcC
Confidence 3 34789986 456778888988533111000 0113333211 11 122333443
Q ss_pred -cCCEEEEEcCCCCChhhhhcCCeeEEec
Q 010523 318 -RNHICGMIGNGVNDAPALKKADIGIAVA 345 (508)
Q Consensus 318 -~g~~v~~vGDG~ND~~al~~AdvGIa~~ 345 (508)
.+-.|+..|-=+|-..--+.||+|||-+
T Consensus 287 ~~~l~VAVMGCvVNGPGEak~ADiGIagg 315 (346)
T TIGR00612 287 KTPLKVAVMGCVVNGPGEAKHADIGISGG 315 (346)
T ss_pred CCCCEEEEECceecCCchhhccCeeeecC
Confidence 2468999999999999999999999987
No 244
>PLN02423 phosphomannomutase
Probab=24.05 E-value=1.1e+02 Score=29.45 Aligned_cols=30 Identities=13% Similarity=0.230 Sum_probs=25.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHH
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIA 257 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a 257 (508)
++.+.+.++|++|++. ++++++||+.....
T Consensus 24 ~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~ 53 (245)
T PLN02423 24 EATPEMLEFMKELRKV-VTVGVVGGSDLSKI 53 (245)
T ss_pred cCCHHHHHHHHHHHhC-CEEEEECCcCHHHH
Confidence 4778889999999976 99999999976544
No 245
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=24.05 E-value=1.6e+02 Score=25.74 Aligned_cols=80 Identities=13% Similarity=0.201 Sum_probs=53.0
Q ss_pred HHHHHccCeeEEEEeeecCCCC-ccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCC-cE-EEEcCCc------HHHH
Q 010523 187 NKFAERGLRSLAVAYQEVPEGS-KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GV-KMITGDQ------LAIA 257 (508)
Q Consensus 187 ~~~a~~Glr~l~vA~~~~~~~~-~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi-~v-~mlTGD~------~~~a 257 (508)
.-+...|++|+.+..+.-+++- ..-.+.+-.++|+-.+.-.-.+..++.++.|++.|. ++ +++-|-- ....
T Consensus 25 ~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~ 104 (137)
T PRK02261 25 RALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEV 104 (137)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHH
Confidence 3466899999998865321110 011133447888888888889999999999999966 34 4444432 3445
Q ss_pred HHHHHHhCC
Q 010523 258 KETGRRLGM 266 (508)
Q Consensus 258 ~~ia~~lgi 266 (508)
.+.++++|+
T Consensus 105 ~~~l~~~G~ 113 (137)
T PRK02261 105 EKKFKEMGF 113 (137)
T ss_pred HHHHHHcCC
Confidence 567788886
No 246
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=24.02 E-value=1.4e+02 Score=22.74 Aligned_cols=46 Identities=17% Similarity=0.273 Sum_probs=34.5
Q ss_pred EeccCCCCCcchHHHHHHHHhCCCcEEEEc-CCcHHHHHHHHHHhCC
Q 010523 221 LIPLFDPPIHDSAETIRRALSLGLGVKMIT-GDQLAIAKETGRRLGM 266 (508)
Q Consensus 221 ~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlT-GD~~~~a~~ia~~lgi 266 (508)
++++.++.++.+.+..+.|++.|+.|.+.. +.+.......|...|+
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~ 52 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGA 52 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCC
Confidence 444556677788888999999999988754 4466777777777776
No 247
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.80 E-value=1.4e+02 Score=29.72 Aligned_cols=44 Identities=11% Similarity=0.175 Sum_probs=30.9
Q ss_pred CCCCCcchHHHHHHHHhCCCcE---EEEcCCcHHHHH------HHHHHhCCCC
Q 010523 225 FDPPIHDSAETIRRALSLGLGV---KMITGDQLAIAK------ETGRRLGMGT 268 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v---~mlTGD~~~~a~------~ia~~lgi~~ 268 (508)
.++++.+.++.++.+++.|++. .++-||+++... ..|+++|+..
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14169 10 SKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 4456778888899988778753 556788875443 4667788753
No 248
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=23.76 E-value=63 Score=29.00 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=20.3
Q ss_pred CcchHHHHHHHHhCCCcEEEEcC
Q 010523 229 IHDSAETIRRALSLGLGVKMITG 251 (508)
Q Consensus 229 r~~~~~~I~~l~~~Gi~v~mlTG 251 (508)
-+++.+.|+++.+.|+.++|+|-
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE
T ss_pred chhHHHHHHHHHhcCCeEEEEeC
Confidence 35799999999999999999983
No 249
>PRK04302 triosephosphate isomerase; Provisional
Probab=23.69 E-value=2.8e+02 Score=26.23 Aligned_cols=100 Identities=17% Similarity=0.237 Sum_probs=52.5
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhH
Q 010523 229 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHK 308 (508)
Q Consensus 229 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K 308 (508)
-++..+.++.+++.|+.+++++|+.. .+..+ ...+- ... .+..... +.........+|++-
T Consensus 100 ~~e~~~~v~~a~~~Gl~~I~~v~~~~-~~~~~-~~~~~--~~I---~~~p~~~------------igt~~~~~~~~~~~i 160 (223)
T PRK04302 100 LADIEAVVERAKKLGLESVVCVNNPE-TSAAA-AALGP--DYV---AVEPPEL------------IGTGIPVSKAKPEVV 160 (223)
T ss_pred HHHHHHHHHHHHHCCCeEEEEcCCHH-HHHHH-hcCCC--CEE---EEeCccc------------cccCCCCCcCCHHHH
Confidence 34578899999999999999999843 33322 22221 100 0000000 000000012356666
Q ss_pred HHHHHHHhhc-CCEEEEEcCCCCChhhh---hcCCe-eEEecCc
Q 010523 309 YEIVKHLQAR-NHICGMIGNGVNDAPAL---KKADI-GIAVADA 347 (508)
Q Consensus 309 ~~iV~~l~~~-g~~v~~vGDG~ND~~al---~~Adv-GIa~~~~ 347 (508)
.++++.+++. ...-...|-|+++.... ..+++ |+.+|++
T Consensus 161 ~~~~~~ir~~~~~~pvi~GggI~~~e~~~~~~~~gadGvlVGsa 204 (223)
T PRK04302 161 EDAVEAVKKVNPDVKVLCGAGISTGEDVKAALELGADGVLLASG 204 (223)
T ss_pred HHHHHHHHhccCCCEEEEECCCCCHHHHHHHHcCCCCEEEEehH
Confidence 6777777763 34455668888655444 44544 6777654
No 250
>PLN02151 trehalose-phosphatase
Probab=23.59 E-value=1.7e+02 Score=30.04 Aligned_cols=33 Identities=9% Similarity=0.042 Sum_probs=27.3
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETG 261 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia 261 (508)
+-+++.++|+.|. .+..|.++||........+.
T Consensus 121 ~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 153 (354)
T PLN02151 121 MSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFV 153 (354)
T ss_pred CCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHc
Confidence 4578889999998 45799999999998877654
No 251
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.34 E-value=1.4e+02 Score=29.76 Aligned_cols=45 Identities=16% Similarity=0.197 Sum_probs=32.2
Q ss_pred cCCCCCcchHHHHHHHHhCCCc---EEEEcCCcHHHHH------HHHHHhCCCC
Q 010523 224 LFDPPIHDSAETIRRALSLGLG---VKMITGDQLAIAK------ETGRRLGMGT 268 (508)
Q Consensus 224 l~D~~r~~~~~~I~~l~~~Gi~---v~mlTGD~~~~a~------~ia~~lgi~~ 268 (508)
+...++.+.++.++.++..|++ +.++.||+++... ..|+++|+..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456678888889999888876 4566798875543 4667788854
No 252
>PRK13670 hypothetical protein; Provisional
Probab=23.11 E-value=2.7e+02 Score=29.05 Aligned_cols=97 Identities=16% Similarity=0.185 Sum_probs=65.5
Q ss_pred EEEEEeccCCCCCcchHHHHHHHHh---CCCcEEEEcCCc----------HHHHHHHHHHhCCCCCCCCCccccCCchhh
Q 010523 217 QFIGLIPLFDPPIHDSAETIRRALS---LGLGVKMITGDQ----------LAIAKETGRRLGMGTNMYPSSALSGQDRDE 283 (508)
Q Consensus 217 ~~lG~i~l~D~~r~~~~~~I~~l~~---~Gi~v~mlTGD~----------~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~ 283 (508)
..+|+|+=+||+-.|=...|+++++ .|..+++++|+- ...-..++..+|++--
T Consensus 2 k~~GIIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qrg~p~i~~~~~R~~~a~~~GvD~v-------------- 67 (388)
T PRK13670 2 KVTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGEPAIVDKWTRAKMALENGVDLV-------------- 67 (388)
T ss_pred ceeEEEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCCCCCCCCCHHHHHHHHHHcCCCEE--------------
Confidence 5789999999999999999988874 477787777762 2334456666666310
Q ss_pred hhhcCChhHHhhhcceEeecChhhHHH-HHHHHhhcCCEEEEEcCCCCChhhhhc
Q 010523 284 SIVALPVDELIEKADGFAGVFPEHKYE-IVKHLQARNHICGMIGNGVNDAPALKK 337 (508)
Q Consensus 284 ~~~~~~~~~~~~~~~v~a~~~P~~K~~-iV~~l~~~g~~v~~vGDG~ND~~al~~ 337 (508)
-++++ .|+..+|++=.+ -|+.|...|-..+++|....|...|+.
T Consensus 68 --ielpf--------~~a~~sae~F~~~aV~iL~~l~v~~lv~G~e~g~~~~L~~ 112 (388)
T PRK13670 68 --VELPF--------LYSVQSADFFAEGAVSILDALGVDSLVFGSESGDIEDFQK 112 (388)
T ss_pred --EEeCC--------chHhCCHHHHHHhHHHHHHHcCCCEEEEcCCCCCHHHHHH
Confidence 01111 267777876553 355676567778899988778766654
No 253
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=23.04 E-value=1.1e+03 Score=26.69 Aligned_cols=164 Identities=16% Similarity=0.165 Sum_probs=98.7
Q ss_pred ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcch-HHHHHHHHhCCCcEEEEcCCc
Q 010523 175 KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS-AETIRRALSLGLGVKMITGDQ 253 (508)
Q Consensus 175 ~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~-~~~I~~l~~~Gi~v~mlTGD~ 253 (508)
.+.++++-.+.++.+.+.|++++-+.-+.-. .-+.+. .-+|+--+.-.+.|+- .+.|++|++.|.+|.| -||-
T Consensus 535 ~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~--~A~~iA---~~lGId~v~AellPedK~~~V~~l~~~g~~Vam-VGDG 608 (713)
T COG2217 535 ADELRPDAKEAIAALKALGIKVVMLTGDNRR--TAEAIA---KELGIDEVRAELLPEDKAEIVRELQAEGRKVAM-VGDG 608 (713)
T ss_pred eCCCChhHHHHHHHHHHCCCeEEEEcCCCHH--HHHHHH---HHcChHhheccCCcHHHHHHHHHHHhcCCEEEE-EeCC
Confidence 3456777888999999999997666432200 000000 1255544445555544 5789999999966555 4886
Q ss_pred HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChh
Q 010523 254 LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAP 333 (508)
Q Consensus 254 ~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~ 333 (508)
..-|-++|.. .+=.++|-| .|+
T Consensus 609 INDAPALA~A--------------------------------------------------------dVGiAmG~G-tDv- 630 (713)
T COG2217 609 INDAPALAAA--------------------------------------------------------DVGIAMGSG-TDV- 630 (713)
T ss_pred chhHHHHhhc--------------------------------------------------------CeeEeecCC-cHH-
Confidence 5433333321 122345553 455
Q ss_pred hhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--cccHHH
Q 010523 334 ALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNF--LFTLDT 411 (508)
Q Consensus 334 al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~--~~pl~~ 411 (508)
++..|||-+- .+.-... .+ .+--.-+.-|.+.||+-..+.|+...+..+.++.+++.+. .+.+++
T Consensus 631 A~eaADvvL~-~~dL~~v---~~---------ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g~l~p~~A~~am~~SS 697 (713)
T COG2217 631 AIEAADVVLM-RDDLSAV---PE---------AIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGGLLTPWIAALAMSGSS 697 (713)
T ss_pred HHHhCCEEEe-cCCHHHH---HH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHcccH
Confidence 5788888653 3211111 11 1112234567899999999999999999999988888773 445555
Q ss_pred HHHH
Q 010523 412 VIAI 415 (508)
Q Consensus 412 ~~~l 415 (508)
+.++
T Consensus 698 v~Vv 701 (713)
T COG2217 698 VLVV 701 (713)
T ss_pred HHHH
Confidence 5554
No 254
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=22.86 E-value=8.4e+02 Score=28.43 Aligned_cols=161 Identities=17% Similarity=0.194 Sum_probs=91.0
Q ss_pred hhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcc-hHHHHHHHHhCCCcEEEEcCCcH
Q 010523 176 SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHD-SAETIRRALSLGLGVKMITGDQL 254 (508)
Q Consensus 176 ~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~-~~~~I~~l~~~Gi~v~mlTGD~~ 254 (508)
+..+......+..+.+.|+++.-+.-++-... ... -+-+|+--++-+..|. =.+-|+++++.|.+|.|+ ||-.
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA--~sv---A~~VGi~~V~aev~P~~K~~~Ik~lq~~~~~VaMV-GDGI 795 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAA--RSV---AQQVGIDNVYAEVLPEQKAEKIKEIQKNGGPVAMV-GDGI 795 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCHHHH--HHH---HHhhCcceEEeccCchhhHHHHHHHHhcCCcEEEE-eCCC
Confidence 45667778889999999999887753321000 000 0124533344444443 356899999999777776 6644
Q ss_pred HHHHHHHH-HhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChh
Q 010523 255 AIAKETGR-RLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAP 333 (508)
Q Consensus 255 ~~a~~ia~-~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~ 333 (508)
.-|-++|. .+|| ++|-| . .-
T Consensus 796 NDaPALA~AdVGI---------------------------------------------------------aig~g-s-~v 816 (951)
T KOG0207|consen 796 NDAPALAQADVGI---------------------------------------------------------AIGAG-S-DV 816 (951)
T ss_pred CccHHHHhhccce---------------------------------------------------------eeccc-c-HH
Confidence 32222221 1222 34444 2 23
Q ss_pred hhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccHHHHH
Q 010523 334 ALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVI 413 (508)
Q Consensus 334 al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~pl~~~~ 413 (508)
|+..|||=. |.+ | |. +=...+--.-+.-|++..|+-+.+.|++.++..+...++...+.+.|.....
T Consensus 817 AieaADIVL-mrn---------~--L~-~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~l 883 (951)
T KOG0207|consen 817 AIEAADIVL-MRN---------D--LR-DVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASL 883 (951)
T ss_pred HHhhCCEEE-Ecc---------c--hh-hhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHH
Confidence 456666633 332 1 00 1111222233456789999999999999988888777776666555544333
Q ss_pred H
Q 010523 414 A 414 (508)
Q Consensus 414 ~ 414 (508)
.
T Consensus 884 a 884 (951)
T KOG0207|consen 884 A 884 (951)
T ss_pred H
Confidence 3
No 255
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=22.75 E-value=7.2e+02 Score=24.23 Aligned_cols=28 Identities=21% Similarity=0.347 Sum_probs=18.4
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCCh
Q 010523 305 PEHKYEIVKHLQARNHICGMIGNGVNDA 332 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~~v~~vGDG~ND~ 332 (508)
|..-.+.++.+++....-+++|-|+++.
T Consensus 185 ~~~~~~~i~~vk~~~~~pv~vGfGI~~~ 212 (258)
T PRK13111 185 AADLAELVARLKAHTDLPVAVGFGISTP 212 (258)
T ss_pred CccHHHHHHHHHhcCCCcEEEEcccCCH
Confidence 3444567777777655556779888554
No 256
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=22.75 E-value=4.5e+02 Score=21.82 Aligned_cols=27 Identities=15% Similarity=0.161 Sum_probs=23.4
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHH
Q 010523 229 IHDSAETIRRALSLGLGVKMITGDQLA 255 (508)
Q Consensus 229 r~~~~~~I~~l~~~Gi~v~mlTGD~~~ 255 (508)
-+++.++++.+++.|++|+.+|+....
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~s 86 (128)
T cd05014 60 TDELLNLLPHLKRRGAPIIAITGNPNS 86 (128)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 467889999999999999999997654
No 257
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=22.74 E-value=2e+02 Score=29.13 Aligned_cols=52 Identities=19% Similarity=0.144 Sum_probs=45.2
Q ss_pred CCCCcEEEEEeccCCCCCcchHHHHHHHHhC---CCcEEEEcCCcHHHHHHHHHH
Q 010523 212 SGSPWQFIGLIPLFDPPIHDSAETIRRALSL---GLGVKMITGDQLAIAKETGRR 263 (508)
Q Consensus 212 ~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~---Gi~v~mlTGD~~~~a~~ia~~ 263 (508)
.+.+|.=+=+++=..-+-||..++++.++.. |..|...+-|++..|++++.-
T Consensus 163 ~~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 163 GGWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred cCCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 3678888888887777889999999999999 999989999999999988864
No 258
>PF07287 DUF1446: Protein of unknown function (DUF1446); InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length. The function of this family is unknown.
Probab=22.67 E-value=3.5e+02 Score=27.95 Aligned_cols=40 Identities=25% Similarity=0.337 Sum_probs=31.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCc-----HHHHHHHHHHhCCC
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQ-----LAIAKETGRRLGMG 267 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~-----~~~a~~ia~~lgi~ 267 (508)
..++....+..+++.||+|+.=+|-- .+...+++++.|+.
T Consensus 56 ~~~~L~~~L~~~~~~gIkvI~NaGg~np~~~a~~v~eia~e~Gl~ 100 (362)
T PF07287_consen 56 FVRDLRPLLPAAAEKGIKVITNAGGLNPAGCADIVREIARELGLS 100 (362)
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHHHHhcCCC
Confidence 35578889999999999998877643 35667788888885
No 259
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=22.38 E-value=82 Score=24.82 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=27.0
Q ss_pred EEeccCCCC-CcchHHHHHHHHhCCCcEEEEcCCcH
Q 010523 220 GLIPLFDPP-IHDSAETIRRALSLGLGVKMITGDQL 254 (508)
Q Consensus 220 G~i~l~D~~-r~~~~~~I~~l~~~Gi~v~mlTGD~~ 254 (508)
-.+.++-+- +....+.++.|+++|+++...|.+..
T Consensus 42 v~i~ie~~~~~~~~~~i~~~L~~~G~~~~~~~~~~~ 77 (85)
T cd04906 42 IFVGVSVANGAEELAELLEDLKSAGYEVVDLSDDEL 77 (85)
T ss_pred EEEEEEeCCcHHHHHHHHHHHHHCCCCeEECCCCHH
Confidence 345566665 77889999999999999987776643
No 260
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=22.34 E-value=8.1e+02 Score=24.95 Aligned_cols=49 Identities=22% Similarity=0.293 Sum_probs=38.4
Q ss_pred EEEEeccCCCCCcchHHHHHHHHhC----CCcEEEEcCCc--H--HHHHHHHHHhCC
Q 010523 218 FIGLIPLFDPPIHDSAETIRRALSL----GLGVKMITGDQ--L--AIAKETGRRLGM 266 (508)
Q Consensus 218 ~lG~i~l~D~~r~~~~~~I~~l~~~----Gi~v~mlTGD~--~--~~a~~ia~~lgi 266 (508)
+=|++..--.+=+++.++++.|.+. .|.++.+|..- . ..|.++...+|.
T Consensus 42 IDGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv 98 (389)
T KOG1618|consen 42 IDGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGV 98 (389)
T ss_pred cccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCC
Confidence 4578888888889999999999988 89999998332 2 456677777776
No 261
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=22.27 E-value=3.4e+02 Score=25.26 Aligned_cols=58 Identities=14% Similarity=0.153 Sum_probs=41.0
Q ss_pred CChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCc
Q 010523 174 NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQ 253 (508)
Q Consensus 174 ~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~ 253 (508)
++....+.+...+..+...|--.+++++.. --+++.++++.+++.|.+++.+||..
T Consensus 91 nd~~~~~~f~~ql~~~~~~gDvli~iS~SG------------------------~s~~v~~a~~~Ak~~G~~vI~IT~~~ 146 (196)
T PRK10886 91 NDRLHDEVYAKQVRALGHAGDVLLAISTRG------------------------NSRDIVKAVEAAVTRDMTIVALTGYD 146 (196)
T ss_pred ccccHHHHHHHHHHHcCCCCCEEEEEeCCC------------------------CCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 344455556666666666666666666543 13678899999999999999999976
Q ss_pred HH
Q 010523 254 LA 255 (508)
Q Consensus 254 ~~ 255 (508)
..
T Consensus 147 ~s 148 (196)
T PRK10886 147 GG 148 (196)
T ss_pred CC
Confidence 53
No 262
>PRK10444 UMP phosphatase; Provisional
Probab=22.10 E-value=97 Score=30.03 Aligned_cols=42 Identities=21% Similarity=0.194 Sum_probs=29.2
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCe-eEEec
Q 010523 304 FPEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADI-GIAVA 345 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~Adv-GIa~~ 345 (508)
+|+-=..+.+.++.....++||||.. +|..+-+.+++ ++.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~ 219 (248)
T PRK10444 176 SPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVL 219 (248)
T ss_pred CHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEEC
Confidence 33333344455554567899999997 89999999997 34444
No 263
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=21.94 E-value=2e+02 Score=28.33 Aligned_cols=41 Identities=15% Similarity=0.208 Sum_probs=32.9
Q ss_pred CcEEEEEeccCCCCCcchHHHHHHHHhCCCc-EEEEcCCcHH
Q 010523 215 PWQFIGLIPLFDPPIHDSAETIRRALSLGLG-VKMITGDQLA 255 (508)
Q Consensus 215 ~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~-v~mlTGD~~~ 255 (508)
++..+--+...|.-|.+..+.+..++.+|++ |..+|||...
T Consensus 58 g~~~i~Hlt~r~~n~~~l~~~L~~~~~~Gi~nvL~l~GD~~~ 99 (272)
T TIGR00676 58 GIPTVPHLTCIGATREEIREILREYRELGIRHILALRGDPPK 99 (272)
T ss_pred CCCeeEEeeecCCCHHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 4456667777788888899999999999996 6669999863
No 264
>TIGR00129 fdhD_narQ formate dehydrogenase family accessory protein FdhD. FdhD in E. coli and NarQ in B. subtilis are required for the activity of formate dehydrogenase. The gene name in B. subtilis reflects the requirement of the neighboring gene narA for nitrate assimilation, for which NarQ is not required. In some species, the gene is associated not with a known formate dehydrogenase but with a related putative molybdopterin-binding oxidoreductase. A reasonable hypothesis is that this protein helps prepare a required cofactor for assembly into the holoenzyme.
Probab=21.81 E-value=1.5e+02 Score=28.59 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=29.9
Q ss_pred hHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 232 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 232 ~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
+.+.+.++..+||++.+-.+-....|.++|+++||.
T Consensus 181 s~emv~Ka~~aGIpvlvS~sapT~lavelA~~~giT 216 (237)
T TIGR00129 181 SSEMVQKAARCGVPIIASKSAPTDLAIEVAEESNIT 216 (237)
T ss_pred cHHHHHHHHHcCCCEEEEcccchHHHHHHHHHhCCE
Confidence 457788888888888888888888889999998883
No 265
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=21.81 E-value=74 Score=29.26 Aligned_cols=28 Identities=25% Similarity=0.463 Sum_probs=22.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcH
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQL 254 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~ 254 (508)
+|-||+.+++++|.+.|..++++|+...
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~ 100 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPP 100 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCc
Confidence 4568999999999999988888887654
No 266
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=21.05 E-value=1.4e+02 Score=26.20 Aligned_cols=34 Identities=18% Similarity=0.147 Sum_probs=30.9
Q ss_pred EEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEc
Q 010523 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMIT 250 (508)
Q Consensus 217 ~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlT 250 (508)
.-+.++|+.|.|...+-.+-+.|+++|++|.=+-
T Consensus 17 K~IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVN 50 (140)
T COG1832 17 KTIAVVGASDKPDRPSYRVAKYLQQKGYRVIPVN 50 (140)
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHCCCEEEeeC
Confidence 5688999999999999999999999999998774
No 267
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=20.93 E-value=4.5e+02 Score=21.76 Aligned_cols=26 Identities=23% Similarity=0.188 Sum_probs=22.7
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHH
Q 010523 230 HDSAETIRRALSLGLGVKMITGDQLA 255 (508)
Q Consensus 230 ~~~~~~I~~l~~~Gi~v~mlTGD~~~ 255 (508)
++..+.++.+++.|++++.+|++...
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~ 99 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANS 99 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCC
Confidence 56788999999999999999998653
No 268
>PRK00724 formate dehydrogenase accessory protein; Reviewed
Probab=20.86 E-value=1.6e+02 Score=28.85 Aligned_cols=35 Identities=23% Similarity=0.401 Sum_probs=27.6
Q ss_pred hHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCC
Q 010523 232 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 266 (508)
Q Consensus 232 ~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi 266 (508)
+.+.++++..+||++.+--+-...-|.++|++.||
T Consensus 210 s~emv~Ka~~aGipvivS~saPT~lAVelA~~~gi 244 (263)
T PRK00724 210 SSEMVQKAAMAGIPILVAVSAPTSLAVELAEELGL 244 (263)
T ss_pred hHHHHHHHHHcCCcEEEEcccchHHHHHHHHHhCC
Confidence 45677777888888887778888888888888887
No 269
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=20.77 E-value=4.8e+02 Score=24.16 Aligned_cols=37 Identities=24% Similarity=0.341 Sum_probs=24.3
Q ss_pred chHHHHHHHHhCCCcEEEEc------CC-------cHHHHHHHHHHhCCC
Q 010523 231 DSAETIRRALSLGLGVKMIT------GD-------QLAIAKETGRRLGMG 267 (508)
Q Consensus 231 ~~~~~I~~l~~~Gi~v~mlT------GD-------~~~~a~~ia~~lgi~ 267 (508)
|+.-++..+++.|.+|.-++ ++ +.+.+...|+.+|++
T Consensus 11 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgip 60 (194)
T cd01994 11 DSCYALYRALEEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIP 60 (194)
T ss_pred HHHHHHHHHHHcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCc
Confidence 44455666677777755544 11 457788888888885
No 270
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=20.60 E-value=66 Score=30.03 Aligned_cols=79 Identities=19% Similarity=0.298 Sum_probs=53.7
Q ss_pred HHHHHccCeeEEEEeeecCCCCc--cCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCC--cEEEEcCCcHHHHHHHHH
Q 010523 187 NKFAERGLRSLAVAYQEVPEGSK--ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL--GVKMITGDQLAIAKETGR 262 (508)
Q Consensus 187 ~~~a~~Glr~l~vA~~~~~~~~~--~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi--~v~mlTGD~~~~a~~ia~ 262 (508)
.-+...|++|+.+.. .+|.++. .-.+.+..++|+-....+--+..++.|+.+++.+. ++.++=|-...+ ...++
T Consensus 104 ~~l~~~G~~vi~lG~-~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~-~~~~~ 181 (201)
T cd02070 104 TMLEANGFEVIDLGR-DVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGAPVN-QEFAD 181 (201)
T ss_pred HHHHHCCCEEEECCC-CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECCcCC-HHHHH
Confidence 346789999987763 2332221 11133457899998888888999999999999987 675555555433 35777
Q ss_pred HhCCC
Q 010523 263 RLGMG 267 (508)
Q Consensus 263 ~lgi~ 267 (508)
.+|-+
T Consensus 182 ~~GaD 186 (201)
T cd02070 182 EIGAD 186 (201)
T ss_pred HcCCc
Confidence 77753
No 271
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=20.18 E-value=1e+02 Score=30.49 Aligned_cols=39 Identities=21% Similarity=0.196 Sum_probs=29.4
Q ss_pred EEEEEeccCCCCCcchHHHHHHHHhCCCc-EEEEcCCcHH
Q 010523 217 QFIGLIPLFDPPIHDSAETIRRALSLGLG-VKMITGDQLA 255 (508)
Q Consensus 217 ~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~-v~mlTGD~~~ 255 (508)
..+--+...|.-|.+....+..++.+||+ |..+|||.+.
T Consensus 72 ~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~ 111 (287)
T PF02219_consen 72 EPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPK 111 (287)
T ss_dssp -EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TST
T ss_pred ceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCC
Confidence 45566677788888889999999999995 9999999864
Done!