Query 010524
Match_columns 508
No_of_seqs 267 out of 1853
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 08:39:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010524.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010524hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qe7_A Uracil permease; uracil 100.0 3.8E-29 1.3E-33 262.1 34.5 333 91-465 14-361 (429)
2 3qe7_A Uracil permease; uracil 77.7 66 0.0023 32.9 16.7 127 368-496 41-199 (429)
3 1bts_A BAND 3 anion transport 31.9 27 0.00093 20.9 2.0 19 123-141 6-24 (26)
4 2a65_A Leutaa, Na(+):neurotran 14.8 7.7E+02 0.026 25.5 10.4 57 333-393 242-298 (519)
5 1p7n_A GAG polyprotein capsid 6.7 3.1E+02 0.011 24.2 3.1 54 33-99 40-93 (176)
6 2kgf_A Capsid protein P27; ret 6.6 1.1E+02 0.0038 26.1 0.2 53 31-98 14-68 (140)
7 2v4x_A JSRV capsid, capsid pro 6.2 1.6E+02 0.0055 25.1 0.9 53 31-98 9-63 (140)
8 1r4v_A Hypothetical protein AQ 5.8 3.1E+02 0.011 24.1 2.5 34 69-103 109-142 (171)
9 1wwi_A Hypothetical protein TT 4.7 6.5E+02 0.022 21.5 3.8 34 69-103 85-118 (148)
10 3dh4_A Sodium/glucose cotransp 4.4 2.4E+03 0.083 21.3 12.7 22 171-192 365-386 (530)
No 1
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli}
Probab=99.97 E-value=3.8e-29 Score=262.08 Aligned_cols=333 Identities=16% Similarity=0.111 Sum_probs=251.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCCCcchhHHHhhhhhHHHHhhcCCCccc-cchh-HHHHHHHHHHHHhhcCCCCC
Q 010524 91 FRNDLMAGLTLASLCIPQSIGYATLAKLDPQYGLYTSVVPPLIYAVMGTSREIA-IGPV-AVVSLLLSSMIQKVQDPLAN 168 (508)
Q Consensus 91 l~~DiiaGltv~~~~iPq~iaya~laglpp~~GLyss~v~~liy~lfGss~~~~-~Gp~-a~~sl~~~~~v~~~~~~~~~ 168 (508)
+++++++|++..+....-.++--.+-|+||..+++++.++.+++++++++|.-. .|+. +..+.+.. +.+.+
T Consensus 14 ~~~~i~~GlQh~lam~~~~v~~PlilGl~~~~~l~~agi~Tllq~~~~~~~lP~~~G~sfafi~~~~~--i~~~g----- 86 (429)
T 3qe7_A 14 LLQTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLL--LLPLG----- 86 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHTTTCCCCCEEECGGGHHHHHH--HGGGC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhCCCHHHHHHHHHHHHHHHHHHcCCCCCeEecChHHHHHHHHH--HHhcC-----
Confidence 789999999998854444444444459999999999999999999997777533 6764 32222222 11111
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhh--hhh--hHHhhccHHHHHHHHHHHHHHHHHHhhhhhhCCCCCCCCCcHHHHHHH
Q 010524 169 PIAYRNFVLTATFFAGIFQASFGLF--RLG--FLIDILSHAAVVGFMAGAAIVIGLQQLKGLIGIPHFTNKTDAISVVKA 244 (508)
Q Consensus 169 ~~~~~~~~~~~t~l~Gvi~~~lgll--rlG--~l~~~ip~~vi~Gf~~gigl~I~~~Ql~~~lG~~~~~~~~~~~~~~~~ 244 (508)
++.+..+++++|++++++|++ |+| ++.|++|+.+++.+++.+|+.++..++++.-|... . .
T Consensus 87 ----~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl~l~~~~~~~~~~~~~-~--~-------- 151 (429)
T 3qe7_A 87 ----YEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPA-E--G-------- 151 (429)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTSSCB-T--T--------
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHHHHHHHHHHhccccCC-C--C--------
Confidence 677889999999999999998 775 89999999999999999999999999887543211 0 0
Q ss_pred HHhhCCCCCchhHHHHHHHHHHHHHHHHHhhhchhhhcccccchhHHHHHHHHHHHHHhhcCCCCeeEeeccc-cCCCCC
Q 010524 245 VWNSLHHTWSPQNFILGCSFLCFILTTRYLGRKKRKLFWLPAIAPLVSVILSTLFVFLTRADKHGVKIVKHID-RGLNPS 323 (508)
Q Consensus 245 ~~~~l~~~~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~~~p~~~~Li~ii~~t~i~~~~~~~~~~v~~vg~ip-~gl~~~ 323 (508)
+. .++.++.+++.++++++++.+..|++.| .++.++++++++++++.++..+. +.+++.| .++|.+
T Consensus 152 -----~~-~~~~~~~la~~tl~iii~~~~~~kg~~~-----~~aiLigivvg~~~a~~~G~~d~--~~v~~a~~~~lP~~ 218 (429)
T 3qe7_A 152 -----QT-PDSKTIIISITTLAVTVLGSVLFRGFLA-----IIPILIGVLVGYALSFAMGIVDT--TPIINAHWFALPTL 218 (429)
T ss_dssp -----BC-CCHHHHHHHHHHHHHHHHHHHSSSTTTT-----THHHHHHHHHHHHHHHHHHHTTS--SHHHHSCSSCCCCC
T ss_pred -----cc-ccHHHHHHHHHHHHHHHHHHHHhcccch-----hhHHHHHHHHHHHHHHHhcCCCc--ccccccccccccCC
Confidence 11 5677888999888888777654444333 23789999999999999874322 1123322 345555
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc----CCCChHHHHHhHHHHHHhhhcccCCCchhhHh
Q 010524 324 SVHQIQFHGQHVGEVAKIGFVAAIVALAEAIAVGRSFASIKGYR----LDGNKEMVAMGFMNIVGSFTSCYVATGSFSRS 399 (508)
Q Consensus 324 ~~p~~~~~~~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~----id~nqEL~a~G~~Ni~~s~fg~~p~~~s~srS 399 (508)
..|++ +++. +...+.+++++++|+++..++.+++.|++ .|.|||+.++|++|+++++||++|.|++..++
T Consensus 219 ~~P~f--~~~~----i~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r~l~adGla~i~~glfGg~p~Tt~~en~ 292 (429)
T 3qe7_A 219 YTPRF--EWFA----ILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENI 292 (429)
T ss_dssp CCCCC--CHHH----HHHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHHHHHHHHHHHHHHHHHTCCCEEECHHHH
T ss_pred CCCcc--cHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhcCCCCcchHHHhH
Confidence 55654 3332 33345678889999998888888777654 46799999999999999999999988866677
Q ss_pred HHhhhcCCcchHHHHHHHHHHHHHHHH--hhHHHhhhhHHHHHHHHHHHhhccCChhHHHHH--HccChh
Q 010524 400 AVNFRAGCESTVSNIVMAITVLISLEF--FTRLLYYTPMAILASIIMSALPGLIDFNEFYNI--WKVDKL 465 (508)
Q Consensus 400 ~vn~~~G~~T~ls~iv~a~~~ll~ll~--l~pl~~~iP~~vLa~iii~~~~~li~~~~~~~l--~k~~~~ 465 (508)
.++..+|++||.+.+++|+++++..++ ++++++.+|.++++++.++ .++++....++.+ .|+|..
T Consensus 293 g~i~~tg~~sr~~~~~ag~~lillgl~pk~~al~~~IP~~vlgg~~l~-lfg~i~~~Gi~~l~~~~v~~~ 361 (429)
T 3qe7_A 293 GVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLL-LYGVIGASGIRVLIESKVDYN 361 (429)
T ss_dssp HHHHHHTBCCHHHHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHHH-HHHHHHHHHHHHHHHTTSCTT
T ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCCC
Confidence 788899999999999999988877653 6789999999999998765 9999999999888 777754
No 2
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli}
Probab=77.67 E-value=66 Score=32.86 Aligned_cols=127 Identities=15% Similarity=0.099 Sum_probs=71.1
Q ss_pred CCCChHHHHHhHHHHHHhhhcccC--C-Cc-hhhH----hHHhhhcCCcchHHHHH-HHHHHHHHHHHh-----hHHHhh
Q 010524 368 LDGNKEMVAMGFMNIVGSFTSCYV--A-TG-SFSR----SAVNFRAGCESTVSNIV-MAITVLISLEFF-----TRLLYY 433 (508)
Q Consensus 368 id~nqEL~a~G~~Ni~~s~fg~~p--~-~~-s~sr----S~vn~~~G~~T~ls~iv-~a~~~ll~ll~l-----~pl~~~ 433 (508)
.|++..+++-|++.++=+++++.+ . .| +++- +.+.. .|-+.-+.+++ +|++.++.-+++ ..+.++
T Consensus 41 l~~~~~l~~agi~Tllq~~~~~~~lP~~~G~sfafi~~~~~i~~-~g~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~ 119 (429)
T 3qe7_A 41 INPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLP-LGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVL 119 (429)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTTTCCCCCEEECGGGHHHHHHHGG-GCHHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCCCeEecChHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 466789999999999988875443 3 11 2222 11111 23333333333 444444433332 268899
Q ss_pred hhHHHHHHHHHHHhhccCChhHHHHHH-------ccChhhHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHH
Q 010524 434 TPMAILASIIMSALPGLIDFNEFYNIW-------KVDKLDFLACIGAFFGVLFA-----------SVEIGLLVAVIFLSC 495 (508)
Q Consensus 434 iP~~vLa~iii~~~~~li~~~~~~~l~-------k~~~~d~~i~~~t~~~~~~~-----------~v~~Gi~~gv~~s~l 495 (508)
+|..+.+.++..+|..+.... ....- ..+..+..+.+.+++.++++ ++..|+.+|..++.+
T Consensus 120 ~PpvviG~~i~~IGl~l~~~~-~~~~~~~~~~~~~~~~~~~~la~~tl~iii~~~~~~kg~~~~~aiLigivvg~~~a~~ 198 (429)
T 3qe7_A 120 FPPAAMGAIVAVIGLELAGVA-AGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFA 198 (429)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH-HHHHTSSCBTTBCCCHHHHHHHHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHHHH
T ss_pred CCCeeeHHHHHHHHHHHHHHH-HHhccccCCCCccccHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHH
Confidence 999999999988888775321 11111 11223455666666665553 556666666655554
Q ss_pred H
Q 010524 496 C 496 (508)
Q Consensus 496 ~ 496 (508)
.
T Consensus 199 ~ 199 (429)
T 3qe7_A 199 M 199 (429)
T ss_dssp H
T ss_pred h
Confidence 3
No 3
>1bts_A BAND 3 anion transport protein; transmembrane protein; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 1btt_A
Probab=31.89 E-value=27 Score=20.89 Aligned_cols=19 Identities=21% Similarity=0.506 Sum_probs=14.2
Q ss_pred hHHHhhhhhHHHHhhcCCC
Q 010524 123 GLYTSVVPPLIYAVMGTSR 141 (508)
Q Consensus 123 GLyss~v~~liy~lfGss~ 141 (508)
.+.++.+.+++|++|++-|
T Consensus 6 ~i~s~ai~Gi~f~lf~gQP 24 (26)
T 1bts_A 6 LLISTAVQGILFALLGAXX 24 (26)
T ss_dssp HHHHHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 4678888899999998765
No 4
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=14.82 E-value=7.7e+02 Score=25.54 Aligned_cols=57 Identities=9% Similarity=-0.138 Sum_probs=38.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcCCCChHHHHHhHHHHHHhhhcccCCC
Q 010524 333 QHVGEVAKIGFVAAIVALAEAIAVGRSFASIKGYRLDGNKEMVAMGFMNIVGSFTSCYVAT 393 (508)
Q Consensus 333 ~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~id~nqEL~a~G~~Ni~~s~fg~~p~~ 393 (508)
+.+.++... ++.++--..+..-+++.-.+++-|.-|+-......|..-+++.|+...
T Consensus 242 ~vw~~A~gQ----~FFSLslG~G~~ity~SY~~~~~n~~~~a~~v~~~n~~~sllaG~~IF 298 (519)
T 2a65_A 242 GVWIAAVGQ----IFFTLSLGFGAIITYASYVRKDQDIVLSGLTAATLNEKAEVILGGSIS 298 (519)
T ss_dssp HHHHHHHHH----HHHHHTTTSSHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHH----HHHHhHHHHhHHhhhhcccCCCcChHhhHHHHHHHHHHHHHHHHHHHH
Confidence 344444443 334443334445566677778888999999999999999998877543
No 5
>1p7n_A GAG polyprotein capsid protein P27; retrovirus, immature GAG, V protein; 2.60A {Rous sarcoma virus} SCOP: a.73.1.1
Probab=6.69 E-value=3.1e+02 Score=24.24 Aligned_cols=54 Identities=11% Similarity=0.050 Sum_probs=33.4
Q ss_pred cCCCCCChHHHHHHHhhhhcccchhhhhccCCchhhHHHHHhhhcccccccccCChhhhHHHHHHHH
Q 010524 33 NAPKPPGFWQELVNSVRETFFPHRRKFKNEHDGFNLVFTFLHGLFPILHWCRNYKASKFRNDLMAGL 99 (508)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pi~~wl~~y~~~~l~~DiiaGl 99 (508)
..|.+....+++|+.+++.= +.+.- ....++.+- -.|+..|+|+++.+-+++|-
T Consensus 40 ~~pl~~K~IkeLk~av~~yG----------~~aP~-T~~~le~La--~~~LtP~Dw~~laravLs~g 93 (176)
T 1p7n_A 40 WTPLEPKLITRLADTVRTKG----------LRSPI-TMAEVEALM--SSPLLPHDVTNLMRVILGPA 93 (176)
T ss_dssp SCCCCHHHHHHHHHHHHTTC----------SSCHH-HHHHHHHHT--SSCCCHHHHHHHHHHHHCHH
T ss_pred ccCCCHHHHHHHHHHHHHhC----------CCcch-HHHHHHHHH--hCCCChHHHHHHHHHHhCch
Confidence 34666666677766665432 11111 444556655 47999999999888777654
No 6
>2kgf_A Capsid protein P27; retrovirus capsid protein, N-terminal core domain (SCOP), viral protein; NMR {Mason-pfizer monkey virus}
Probab=6.61 E-value=1.1e+02 Score=26.09 Aligned_cols=53 Identities=9% Similarity=0.102 Sum_probs=35.7
Q ss_pred cccCCCCCChHHHHHHHhhhhc--ccchhhhhccCCchhhHHHHHhhhcccccccccCChhhhHHHHHHH
Q 010524 31 VLNAPKPPGFWQELVNSVRETF--FPHRRKFKNEHDGFNLVFTFLHGLFPILHWCRNYKASKFRNDLMAG 98 (508)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~pi~~wl~~y~~~~l~~DiiaG 98 (508)
++..|.+....+++|+.+++.= .|| ....++.+- -.|+..|+++++.+-+++|
T Consensus 14 ~~~~pl~~K~iKeLk~Av~~YGp~APy-------------T~~lle~la--~~~LtP~DW~~lara~Ls~ 68 (140)
T 2kgf_A 14 RHHNGFDFAVIKELKTAASQYGATAPY-------------TLAIVESVA--DNWLTPTDWNTLVRAVLSG 68 (140)
T ss_dssp EEECCCCHHHHHHHHHHHHHTCTTSHH-------------HHHHHHHHH--TSBCCHHHHHHHHHHHCCS
T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCch-------------HHHHHHHHH--hCCCChHHHHHHHHHHcCc
Confidence 5566888888888888877643 333 334444444 2788888888877776665
No 7
>2v4x_A JSRV capsid, capsid protein P27; virion, zinc-finger, metal-binding, CAPS protein, structural protein, viral nucleoprotein; HET: MSE; 1.5A {Jaagsiekte sheep retrovirus}
Probab=6.21 E-value=1.6e+02 Score=25.11 Aligned_cols=53 Identities=11% Similarity=0.021 Sum_probs=34.8
Q ss_pred cccCCCCCChHHHHHHHhhhhc--ccchhhhhccCCchhhHHHHHhhhcccccccccCChhhhHHHHHHH
Q 010524 31 VLNAPKPPGFWQELVNSVRETF--FPHRRKFKNEHDGFNLVFTFLHGLFPILHWCRNYKASKFRNDLMAG 98 (508)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~pi~~wl~~y~~~~l~~DiiaG 98 (508)
++..|.+....+++|+.++..= .|| ....++.+-- .|+..|+|+++.+-+++|
T Consensus 9 ~~~~pl~~K~IkeLk~Av~~YGp~APy-------------T~a~le~La~--~~LtP~DW~~lara~Ls~ 63 (140)
T 2v4x_A 9 RYYESLPFKQLKELKIACSQYGPTAPF-------------TIAMIENLGT--QALPPNDWKQTARACLSG 63 (140)
T ss_dssp EEECCCCHHHHHHHHHHHHHTCTTSHH-------------HHHHHHHHHT--SCCCHHHHHHHHHHHSCH
T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCch-------------HHHHHHHHHh--CCCChHHHHHHHHHHcCc
Confidence 3445777788888888777543 233 3344554433 588888888888877776
No 8
>1r4v_A Hypothetical protein AQ_328; structural genomics, all-alpha, histon fold, PSI, protein ST initiative, midwest center for structural genomics; HET: MSE; 1.90A {Aquifex aeolicus} SCOP: a.22.1.4
Probab=5.78 E-value=3.1e+02 Score=24.07 Aligned_cols=34 Identities=15% Similarity=0.233 Sum_probs=22.7
Q ss_pred HHHHHhhhcccccccccCChhhhHHHHHHHHHHHH
Q 010524 69 VFTFLHGLFPILHWCRNYKASKFRNDLMAGLTLAS 103 (508)
Q Consensus 69 ~~~~l~~~~pi~~wl~~y~~~~l~~DiiaGltv~~ 103 (508)
+++++-.+-| ++--.....++...|+.+|+++++
T Consensus 109 IL~~la~~PP-ld~~l~ee~e~~LPeI~GgL~val 142 (171)
T 1r4v_A 109 LLEYIAFIPP-VEMNVGEDLKSEYRNIMGGLLLMH 142 (171)
T ss_dssp HHHHHTCCCS-CSSEECHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHhCCC-CCCChhHHHHHHHHHHHHHHHHHH
Confidence 5555554444 433333456678999999999987
No 9
>1wwi_A Hypothetical protein TTHA1479; structural genomics, unknown function, riken structural genomics/proteomics initiative, RSGI; 1.58A {Thermus thermophilus HB8} SCOP: a.22.1.4 PDB: 1wws_A
Probab=4.74 E-value=6.5e+02 Score=21.50 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=23.3
Q ss_pred HHHHHhhhcccccccccCChhhhHHHHHHHHHHHH
Q 010524 69 VFTFLHGLFPILHWCRNYKASKFRNDLMAGLTLAS 103 (508)
Q Consensus 69 ~~~~l~~~~pi~~wl~~y~~~~l~~DiiaGltv~~ 103 (508)
+++++-.+-| ++--.....++...|+.+|+++++
T Consensus 85 il~~la~~PP-ld~~~~~e~e~~lP~I~GgL~v~l 118 (148)
T 1wwi_A 85 VLDALAALPP-LDLEVAEDVRNLLPELAGALVVAY 118 (148)
T ss_dssp HHHHHHTSCC-CSSEECHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCC-CCCChhHHHHHHHHHHHHHHHHHH
Confidence 5666665544 333333456778999999999987
No 10
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=4.40 E-value=2.4e+03 Score=21.31 Aligned_cols=22 Identities=23% Similarity=0.034 Sum_probs=13.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhh
Q 010524 171 AYRNFVLTATFFAGIFQASFGL 192 (508)
Q Consensus 171 ~~~~~~~~~t~l~Gvi~~~lgl 192 (508)
+.....=..++..|++-++++.
T Consensus 365 ~~~~v~R~~~v~~~i~a~~~a~ 386 (530)
T 3dh4_A 365 KLVNVGRTAAVVALIIACLIAP 386 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445566777777777664
Done!