Query 010525
Match_columns 508
No_of_seqs 327 out of 1419
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 08:40:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010525.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010525hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.5E-54 5E-59 453.6 20.6 323 79-427 21-398 (413)
2 1tzs_A Cathepsin E; hydrolase, 100.0 1.5E-51 5E-56 422.9 25.8 298 79-432 24-346 (351)
3 1mpp_A Pepsin; hydrolase(acid 100.0 2.7E-51 9.1E-56 422.5 26.5 304 80-433 20-360 (361)
4 3aup_A SBG7S, BG, basic 7S glo 100.0 3.2E-51 1.1E-55 427.9 24.3 324 79-433 22-398 (403)
5 2x0b_A Renin; hydrolase-hormon 100.0 9.5E-52 3.2E-56 428.1 18.7 293 79-428 62-383 (383)
6 1j71_A Candidapepsin, aspartic 100.0 4.4E-51 1.5E-55 416.6 22.3 301 79-439 13-333 (334)
7 3fv3_A SAPP1P-secreted asparti 100.0 1.1E-50 3.7E-55 414.4 23.9 298 79-440 13-339 (339)
8 1am5_A Pepsin, acid proteinase 100.0 7.8E-51 2.7E-55 413.0 22.6 290 79-428 13-324 (324)
9 2apr_A Rhizopuspepsin; hydrola 100.0 1.3E-50 4.6E-55 411.4 24.2 291 80-428 17-324 (325)
10 3c9x_A Trichoderma reesei aspa 100.0 6.4E-51 2.2E-55 414.5 21.5 298 79-427 16-329 (329)
11 2ewy_A Beta-secretase 2; BACE2 100.0 8.2E-51 2.8E-55 422.1 21.9 319 80-443 15-370 (383)
12 1dpj_A Proteinase A; proteinas 100.0 8.2E-51 2.8E-55 413.7 20.9 291 79-428 14-329 (329)
13 2qp8_A Beta-secretase 1; BACE1 100.0 1.3E-50 4.6E-55 422.2 22.7 318 80-443 23-382 (395)
14 2qzx_A Candidapepsin-5; aspart 100.0 1.2E-50 4E-55 414.7 21.7 307 79-440 13-341 (342)
15 3psg_A Pepsinogen; hydrolase(a 100.0 1E-50 3.4E-55 419.2 21.0 293 79-428 57-370 (370)
16 1htr_B Gastricsin; aspartyl pr 100.0 1.1E-50 3.8E-55 412.7 20.4 291 79-428 13-329 (329)
17 1oew_A Endothiapepsin; hydrola 100.0 1.7E-50 5.8E-55 411.3 20.7 297 79-427 16-329 (329)
18 3cms_A Chymosin B; hydrolase, 100.0 1.3E-50 4.3E-55 411.3 19.6 291 79-428 15-323 (323)
19 3vf3_A Beta-secretase 1; struc 100.0 1.1E-49 3.8E-54 416.3 25.3 320 79-443 29-389 (402)
20 3pvk_A Candidapepsin-2; hydrol 100.0 7.5E-50 2.5E-54 408.6 22.8 308 79-440 13-341 (342)
21 1t6e_X Xylanase inhibitor; two 100.0 1.1E-49 3.7E-54 413.4 23.7 314 80-429 16-374 (381)
22 4aa9_A Chymosin; hydrolase, as 100.0 5.8E-50 2E-54 405.8 20.6 291 79-428 12-320 (320)
23 2bju_A Plasmepsin II; aspartic 100.0 5.5E-50 1.9E-54 421.9 21.2 289 80-428 140-450 (453)
24 3lpj_A Beta-secretase 1; alzhe 100.0 1.7E-49 5.7E-54 421.2 24.5 319 80-443 76-435 (455)
25 3k1w_A Renin; protease, altern 100.0 2.6E-50 8.9E-55 411.8 17.1 292 80-428 20-340 (341)
26 1ibq_A Aspergillopepsin; aspar 100.0 2.9E-49 9.9E-54 401.6 22.0 293 80-427 16-324 (325)
27 1yg9_A Aspartic protease BLA G 100.0 1.9E-49 6.4E-54 403.8 20.1 291 79-428 18-329 (330)
28 1miq_A Plasmepsin; aspartic pr 100.0 2.8E-49 9.5E-54 409.1 20.4 288 80-428 64-374 (375)
29 1qdm_A Prophytepsin; aspartic 100.0 9.1E-49 3.1E-53 416.5 24.5 304 79-427 53-477 (478)
30 1izd_A Aspartic proteinase; su 100.0 1.4E-48 4.9E-53 396.1 21.8 290 80-427 17-322 (323)
31 1bxo_A Protein (penicillopepsi 100.0 1E-48 3.5E-53 397.2 17.0 290 80-427 17-322 (323)
32 3qvc_A Histo-aspartic protease 100.0 1.1E-47 3.8E-52 404.8 19.1 288 80-428 139-449 (451)
33 1wkr_A Polyporopepsin; hydrola 100.0 6.4E-47 2.2E-51 386.7 22.0 290 79-433 13-338 (340)
34 1b5f_A Protein (cardosin A); h 100.0 4.3E-37 1.5E-41 298.5 17.2 207 79-329 14-237 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.2E-35 4.2E-40 288.6 17.9 216 198-428 4-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.7 4E-17 1.4E-21 135.1 5.8 78 79-188 14-96 (97)
37 1b5f_B Protein (cardosin A); h 99.6 6.2E-16 2.1E-20 125.4 3.9 78 350-428 5-87 (87)
38 2i1a_A DNA damage-inducible pr 93.5 0.1 3.6E-06 45.3 5.8 26 400-425 109-134 (148)
39 3s8i_A Protein DDI1 homolog 1; 93.1 0.15 5.1E-06 44.6 6.1 36 393-428 101-136 (148)
40 2i1a_A DNA damage-inducible pr 57.7 7.7 0.00026 33.1 3.6 21 89-109 34-54 (148)
41 1lya_A Cathepsin D; lysosomal 40.7 15 0.0005 29.1 2.4 40 272-319 5-44 (97)
42 1fmb_A EIAV protease; hydrolas 31.9 19 0.00065 29.0 1.8 20 89-108 16-35 (104)
43 2hs1_A HIV-1 protease; ultra-h 29.4 23 0.00078 28.3 1.8 20 89-108 16-35 (99)
44 1ibq_A Aspergillopepsin; aspar 27.4 45 0.0015 32.2 3.9 33 281-321 13-45 (325)
45 2hah_A Protease, retropepsin; 24.5 31 0.001 28.4 1.8 20 89-108 21-40 (116)
46 3slz_A GAG-Pro-POL polyprotein 21.4 61 0.0021 27.3 3.0 24 290-318 26-49 (132)
47 1b5f_A Protein (cardosin A); h 21.3 82 0.0028 28.8 4.3 40 272-319 5-44 (239)
48 3ec0_A Protease; HIV-2, inhibi 21.1 38 0.0013 27.0 1.6 20 88-107 15-34 (99)
49 3aup_A SBG7S, BG, basic 7S glo 21.1 77 0.0026 31.6 4.4 42 271-319 11-52 (403)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.5e-54 Score=453.64 Aligned_cols=323 Identities=21% Similarity=0.359 Sum_probs=256.7
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEeccCCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCC--CC-
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGT--SC- 155 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~--~C- 155 (508)
.+...|..++|+|++.|++||||+++||||. .| .+|+||++++|.++.|.... .|
T Consensus 21 ~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~--~c--------------------~~Sst~~~v~C~s~~C~~~~~~~~~ 78 (413)
T 3vla_A 21 QYVTTINQRTPLVSENLVVDLGGRFLWVDCD--QN--------------------YVSSTYRPVRCRTSQCSLSGSIACG 78 (413)
T ss_dssp CEEEEEEETTTTEEEEEEEETTCSSEEEECS--SS--------------------CCCTTCEECBTTSHHHHHTTCCEEE
T ss_pred eEEEEEEcCCCCcceEEEEeCCChhhhcccC--CC--------------------CCCCCcCccCCCcccccccccCCCc
Confidence 5677899999999999999999999999986 22 25999999999999997531 22
Q ss_pred --CC------CCCCCCeeeecC-CCCceeeeEEEEEEEEeccCCCCccc-cccccceEEEeEEeccCCCCCCCCCCeEEe
Q 010525 156 --QN------PKQPCPYTMDYY-TENTSSSGLLVEDILHLISGGDNALK-NSVQASVIIGCGMKQSGGYLDGVAPDGLIG 225 (508)
Q Consensus 156 --~~------~~~~c~y~i~Y~-dg~s~~~G~l~~D~v~l~~~~~~~~~-~~~~~~~~fg~~~~~sg~~~~~~~~dGIlG 225 (508)
.+ .++.|.|.+.|+ + ++++.|++++|+|+|++.++.... ....+++.|||++++.+.... ..+|||||
T Consensus 79 ~c~s~~~~~c~~~~c~~~i~Y~~d-~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~-~~~dGIlG 156 (413)
T 3vla_A 79 DCFNGPRPGCNNNTCGVFPENPVI-NTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLA-SGVVGMAG 156 (413)
T ss_dssp CCSSCCBTTBCSSEEEECCEETTT-TEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSC-TTCCEEEE
T ss_pred ccccCCCCCCCCCcCcceeecCcC-CceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcc-cccccccc
Confidence 21 134699999994 6 478999999999999864322100 124468999999987321111 25699999
Q ss_pred cCCCCCChHHHHHhcCCccceeEEeeecC--CCccEEeccCCCC---------C-ceEeeeEEcCCC----------cee
Q 010525 226 LGLGEISVPSLLAKAGLIRNSFSMCFDKD--DSGRIFFGDQGPA---------T-QQSTSFLASNGK----------YIT 283 (508)
Q Consensus 226 Lg~~~~S~~~qL~~~gli~~~FSl~l~~~--~~G~i~fG~~d~~---------~-~~~tp~v~~~~~----------~~~ 283 (508)
||++.+|+++||+++++++++||+||.++ ..|.|+||+.+.. . +.|||++..+.. ..+
T Consensus 157 Lg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~ 236 (413)
T 3vla_A 157 LGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVE 236 (413)
T ss_dssp CSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCS
T ss_pred cCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCce
Confidence 99999999999999988899999999873 5799999998752 3 789999875422 269
Q ss_pred EEEEeeeEEECCeeeccC----------ccceEEccCccceeccHHHHHHHHHHHHHhccCcc--ccccccccccccccc
Q 010525 284 YIIGVETCCIGSSCLKQT----------SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTI--TSFEGYPWKCCYKSS 351 (508)
Q Consensus 284 y~V~l~~i~Vg~~~~~~~----------~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~--~~~~~~~~~~C~~~~ 351 (508)
|+|+|++|.||++.+... ..++||||||++++||+++|++|.++|.+++...+ .......++.||..+
T Consensus 237 y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~~ 316 (413)
T 3vla_A 237 YFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTD 316 (413)
T ss_dssp CEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEECT
T ss_pred EEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceeccC
Confidence 999999999999988632 35799999999999999999999999988764211 111224578999876
Q ss_pred cCC----CCCCCeEEEEecC-CCeEEEcCCeEEEEeeccccEEEEEEEecCC---CceEEcceeeeeEEEEEeCCCCEEE
Q 010525 352 SQR----LPKLPSVKLMFPQ-NNSFVVNNPVFVIYGTQVVTGFCLAIQPVDG---DIGTIGQNFMTGYRVVFDRENLKLG 423 (508)
Q Consensus 352 ~~~----~~~~P~i~f~f~g-~~~~~i~~~~~~~~~~~~~~~~Cl~i~~~~~---~~~IlG~~fl~~~yvVFD~e~~rIG 423 (508)
+.. +..+|+|+|+|.| +..|+|++++|++.... +.+|++++..+. +.||||+.||+++|+|||++|+|||
T Consensus 317 ~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riG 394 (413)
T 3vla_A 317 NILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVG 394 (413)
T ss_dssp TCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEE
T ss_pred CccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEE
Confidence 532 3479999999976 47899999999987643 678999887652 5799999999999999999999999
Q ss_pred EeeC
Q 010525 424 WSHS 427 (508)
Q Consensus 424 fa~~ 427 (508)
||+.
T Consensus 395 fa~~ 398 (413)
T 3vla_A 395 FSGT 398 (413)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9986
No 2
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-51 Score=422.86 Aligned_cols=298 Identities=19% Similarity=0.337 Sum_probs=242.2
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc-CC--CCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CV--RCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSC 155 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~--~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C 155 (508)
.+...|..|+|+|++.|++||||+++||+|. |. .|.. ++.|||++|+||+...
T Consensus 24 ~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~------------~~~y~~~~SsT~~~~~------------ 79 (351)
T 1tzs_A 24 EYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKT------------HSRFQPSQSSTYSQPG------------ 79 (351)
T ss_dssp CCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT------------SCCBCGGGCTTCBCCS------------
T ss_pred EEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCC------------CCcCCcccCcceEECC------------
Confidence 4677899999999999999999999999998 86 5653 4699999999999754
Q ss_pred CCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCCC---
Q 010525 156 QNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS--- 232 (508)
Q Consensus 156 ~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~S--- 232 (508)
|.|.+.|++| +++|.+++|+|+|++. ..+++.|||++.+.+..+.....|||||||+..++
T Consensus 80 ------~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 143 (351)
T 1tzs_A 80 ------QSFSIQYGTG--SLSGIIGADQVSVEGL--------TVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGG 143 (351)
T ss_dssp ------CEEEEESSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGG
T ss_pred ------CEEEEEeCCC--CeEEEEEEeEEEECCe--------EECCeEEEEEEeccccccccCCCceEEecCCccccccC
Confidence 8999999996 5899999999999875 45789999999887754443456999999998654
Q ss_pred ---hHHHHHhcCCc-cceeEEeeecCC----CccEEeccCCCCC----ceEeeeEEcCCCceeEEEEeeeEEECCeeec-
Q 010525 233 ---VPSLLAKAGLI-RNSFSMCFDKDD----SGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCCIGSSCLK- 299 (508)
Q Consensus 233 ---~~~qL~~~gli-~~~FSl~l~~~~----~G~i~fG~~d~~~----~~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~- 299 (508)
++++|+++|+| +++||+||++.. .|.|+||++|+.+ +.|+|++. ..+|.|.|++|.||++.+.
T Consensus 144 ~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~ 219 (351)
T 1tzs_A 144 VTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTK----QAYWQIALDNIQVGGTVMFC 219 (351)
T ss_dssp CCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSE----ETTEEEEEEEEEETTEEEEC
T ss_pred CCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCC----CceEEEEeCEEEECCceEEc
Confidence 67899999999 899999998763 7999999999864 46888854 3689999999999998854
Q ss_pred cCccceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEE
Q 010525 300 QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFV 379 (508)
Q Consensus 300 ~~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~ 379 (508)
.....+||||||++++||+++|++|.+++.... .. +.....|+.. ..+|+|+|+| +|..++|++++|+
T Consensus 220 ~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~----~~--g~~~~~C~~~-----~~~P~i~f~f-~g~~~~i~~~~yi 287 (351)
T 1tzs_A 220 SEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAP----VD--GEYAVECANL-----NVMPDVTFTI-NGVPYTLSPTAYT 287 (351)
T ss_dssp TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE----CS--SSEEECGGGG-----GGSCCEEEEE-TTEEEEECTTTSE
T ss_pred CCCceEEeccCCcceeCCHHHHHHHHHHhCCcc----cC--CeEEEeCCCC-----ccCCcEEEEE-CCEEEEECHHHhE
Confidence 356689999999999999999999999875432 11 2233456653 4789999999 7889999999999
Q ss_pred EEeeccccEEEE-EEEecC-----CCceEEcceeeeeEEEEEeCCCCEEEEeeCCCCCC
Q 010525 380 IYGTQVVTGFCL-AIQPVD-----GDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDL 432 (508)
Q Consensus 380 ~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~ 432 (508)
+.........|+ +|+..+ .+.||||+.|||++|+|||++++|||||+.+|...
T Consensus 288 ~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~ 346 (351)
T 1tzs_A 288 LLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSH 346 (351)
T ss_dssp ECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC----
T ss_pred eeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccc
Confidence 875432235787 587652 45799999999999999999999999999999763
No 3
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2.7e-51 Score=422.50 Aligned_cols=304 Identities=20% Similarity=0.255 Sum_probs=250.7
Q ss_pred CceeeeecCCCceeEeccccCCceeEEecc-CC---CCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCC
Q 010525 80 QFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CV---RCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSC 155 (508)
Q Consensus 80 ~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~---~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C 155 (508)
+...|..++|+|++.|++||||+++||+|. |. .|.. ++.|||++|+|++...
T Consensus 20 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~------------~~~y~~~~SsT~~~~~------------ 75 (361)
T 1mpp_A 20 YAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVG------------KRFFDPSSSSTFKETD------------ 75 (361)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCS------------SCCBCGGGCTTCEEEE------------
T ss_pred EEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCC------------CCcCCCccCCceEecC------------
Confidence 566788899999999999999999999998 97 6754 3699999999999876
Q ss_pred CCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccC-----CCCCCCCCCeEEecCCCC
Q 010525 156 QNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSG-----GYLDGVAPDGLIGLGLGE 230 (508)
Q Consensus 156 ~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg-----~~~~~~~~dGIlGLg~~~ 230 (508)
|.|.+.|++| +++|.+++|+|+|++. ..+++.|||++.+++ .++.....+||||||+..
T Consensus 76 ------~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~ 139 (361)
T 1mpp_A 76 ------YNLNITYGTG--GANGIYFRDSITVGGA--------TVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPD 139 (361)
T ss_dssp ------EEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGG
T ss_pred ------CeEEEEECCc--eEEEEEEEEEEEECCE--------EEeceEEEEEEeccCccccccccccCCCCCEEEeCCcc
Confidence 8999999996 4899999999999875 457899999999877 444444679999999975
Q ss_pred CC------------hHHHHHhcCCc-cceeEEeeecC-CCccEEeccCCCCC----ceEeeeEEcCCCceeEEEEeeeEE
Q 010525 231 IS------------VPSLLAKAGLI-RNSFSMCFDKD-DSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCC 292 (508)
Q Consensus 231 ~S------------~~~qL~~~gli-~~~FSl~l~~~-~~G~i~fG~~d~~~----~~~tp~v~~~~~~~~y~V~l~~i~ 292 (508)
++ ++++|+++|+| +++||+||+++ ..|.|+||++|+.+ +.|+|++.......+|.|.|++|.
T Consensus 140 ~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~ 219 (361)
T 1mpp_A 140 NTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVK 219 (361)
T ss_dssp GSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEE
T ss_pred cccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEE
Confidence 44 56789999999 89999999986 57999999999854 569999775433348999999999
Q ss_pred ECCeeec-cCccceE-EccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCC-CeEEEEec-C-
Q 010525 293 IGSSCLK-QTSFKAI-VDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKL-PSVKLMFP-Q- 367 (508)
Q Consensus 293 Vg~~~~~-~~~~~ai-iDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~-P~i~f~f~-g- 367 (508)
||++.+. .....+| |||||++++||+++|++|.+++..... ...+.....|+.. ..+ |.|+|+|. |
T Consensus 220 v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~----~~~g~~~~~C~~~-----~~~~p~i~f~f~~g~ 290 (361)
T 1mpp_A 220 IDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT----ESQQGYTVPCSKY-----QDSKTTFSLVLQKSG 290 (361)
T ss_dssp ETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE----EETTEEEEEHHHH-----TTCCCEEEEEEECTT
T ss_pred ECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc----CCCCcEEEECCCc-----ccCCCcEEEEEEcCC
Confidence 9998874 3456899 999999999999999999998754321 1112234567654 467 99999994 4
Q ss_pred ----CCeEEEcCCeEEEEeeccccEEEE-EEEecCCCceEEcceeeeeEEEEEeCCCCEEEEeeCCCCCCC
Q 010525 368 ----NNSFVVNNPVFVIYGTQVVTGFCL-AIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLN 433 (508)
Q Consensus 368 ----~~~~~i~~~~~~~~~~~~~~~~Cl-~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~~ 433 (508)
+..++|++++|++....+ ...|+ +|++..++.||||+.|||++|+|||++++|||||+.+|+...
T Consensus 291 ~~~~g~~~~i~~~~y~~~~~~~-~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~~~ 360 (361)
T 1mpp_A 291 SSSDTIDVSVPISKMLLPVDKS-GETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYEN 360 (361)
T ss_dssp CSSCEEEEEEEGGGGEEECSSS-SCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTCC
T ss_pred cCCCCeEEEECHHHhEEecCCC-CCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCCCC
Confidence 789999999999876432 45787 788765568999999999999999999999999999998654
No 4
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=3.2e-51 Score=427.89 Aligned_cols=324 Identities=20% Similarity=0.340 Sum_probs=250.6
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEeccCCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCC--C--
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGT--S-- 154 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~--~-- 154 (508)
.+...|..|+|+|++.|++||||+++||+|. . +.+|+||++++|.++.|.... .
T Consensus 22 ~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~--------------------~~~Sst~~~~~C~s~~C~~~~~~~c~ 79 (403)
T 3aup_A 22 LHWANLQKRTPLMQVPVLVDLNGNHLWVNCE--Q--------------------QYSSKTYQAPFCHSTQCSRANTHQCL 79 (403)
T ss_dssp CEEEEEEETTTTEEEEEEEETTCSSEEEECS--S--------------------CCCCSSCBCCCTTBHHHHHTTCCCEE
T ss_pred eEEEEEECCCCCceeEEEEECCCCceeECCC--C--------------------CCCCCCCCccCCCCccccCccccCcc
Confidence 4667888999999999999999999999985 1 235999999999998886421 1
Q ss_pred -CCCC------CCCCCeeeecC-CCCceeeeEEEEEEEEeccCCCCc---cccccccceEEEeEEeccCC-CCCCCCCCe
Q 010525 155 -CQNP------KQPCPYTMDYY-TENTSSSGLLVEDILHLISGGDNA---LKNSVQASVIIGCGMKQSGG-YLDGVAPDG 222 (508)
Q Consensus 155 -C~~~------~~~c~y~i~Y~-dg~s~~~G~l~~D~v~l~~~~~~~---~~~~~~~~~~fg~~~~~sg~-~~~~~~~dG 222 (508)
|.++ ++.|.|.+.|+ | ++.+.|.+++|+|+|++..+.. ......+++.|||++.+.+. +.. ...||
T Consensus 80 ~c~~~~~s~~~~~~~~~~~~Y~~d-~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~-~~~dG 157 (403)
T 3aup_A 80 SCPAASRPGCHKNTCGLMSTNPIT-QQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLP-RNTQG 157 (403)
T ss_dssp ECSSSCBTTBCSSEEEEEEEETTT-TEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSS-TTCCE
T ss_pred ccCCCCCCCCCCCcceeEeecCCC-CceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCC-CCCce
Confidence 2221 24699999998 5 4789999999999998743210 00024578999999987544 322 35699
Q ss_pred EEecCCCCCChHHHHHhcCCccceeEEeeec--CCCccEEeccCCCC------------CceEeeeEEcCCCceeEEEEe
Q 010525 223 LIGLGLGEISVPSLLAKAGLIRNSFSMCFDK--DDSGRIFFGDQGPA------------TQQSTSFLASNGKYITYIIGV 288 (508)
Q Consensus 223 IlGLg~~~~S~~~qL~~~gli~~~FSl~l~~--~~~G~i~fG~~d~~------------~~~~tp~v~~~~~~~~y~V~l 288 (508)
|||||++.+|++.||++..+.+++||+||.+ ...|.|+||+ |+. .+.|+|++..+ ..+|.|+|
T Consensus 158 IlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~--~~~y~v~l 234 (403)
T 3aup_A 158 VAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL--QGEYNVRV 234 (403)
T ss_dssp EEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT--TSCEEECE
T ss_pred EEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCC--CCcceEEE
Confidence 9999999999999998655558999999987 3679999999 642 56799998754 26899999
Q ss_pred eeEEECCeee-cc-C-cc--------ceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCC
Q 010525 289 ETCCIGSSCL-KQ-T-SF--------KAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPK 357 (508)
Q Consensus 289 ~~i~Vg~~~~-~~-~-~~--------~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~ 357 (508)
++|.||++.+ .. . .+ .+||||||++++||+++|++|.++|.+++...........+..||.. .....
T Consensus 235 ~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c--~~~~~ 312 (403)
T 3aup_A 235 NSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNS--NKINA 312 (403)
T ss_dssp EEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECG--GGCCC
T ss_pred EEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEEC--CCcCc
Confidence 9999999988 41 2 22 49999999999999999999999998776542221111234578753 33447
Q ss_pred CCeEEEEecCC--CeEEEcCCeEEEEeeccccEEEEEEEecCC---CceEEcceeeeeEEEEEeCCCCEEEE-------e
Q 010525 358 LPSVKLMFPQN--NSFVVNNPVFVIYGTQVVTGFCLAIQPVDG---DIGTIGQNFMTGYRVVFDRENLKLGW-------S 425 (508)
Q Consensus 358 ~P~i~f~f~g~--~~~~i~~~~~~~~~~~~~~~~Cl~i~~~~~---~~~IlG~~fl~~~yvVFD~e~~rIGf-------a 425 (508)
+|+|+|+|.|+ ..++|++++|++.... +..|++|+..+. +.||||+.|||++|+|||++|+|||| +
T Consensus 313 ~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~~~~ 390 (403)
T 3aup_A 313 YPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSH 390 (403)
T ss_dssp CCCEEEEESSTTCCEEEECHHHHEEEC-----CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESSCGGGG
T ss_pred CCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEeccccccc
Confidence 99999999766 5999999999987542 568999988753 57999999999999999999999999 6
Q ss_pred eCCCCCCC
Q 010525 426 HSNCQDLN 433 (508)
Q Consensus 426 ~~~C~~~~ 433 (508)
+++|....
T Consensus 391 ~~~C~~~~ 398 (403)
T 3aup_A 391 GVKCADLF 398 (403)
T ss_dssp TCCGGGSC
T ss_pred CCCccccc
Confidence 77887654
No 5
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=9.5e-52 Score=428.10 Aligned_cols=293 Identities=21% Similarity=0.371 Sum_probs=241.1
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc-CC----CCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CV----RCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGT 153 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~----~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~ 153 (508)
.+...|..|+|+|+|.|++||||+++||+|. |. .|.. ++.|||++|+||+...
T Consensus 62 ~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~------------~~~y~~~~SsT~~~~~---------- 119 (383)
T 2x0b_A 62 QYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY------------HKLFDASDSSSYKHNG---------- 119 (383)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHT------------SCCBCGGGCTTCEEEE----------
T ss_pred EEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccC------------CCCCCCCCCCcEEECC----------
Confidence 4577889999999999999999999999998 85 4643 4699999999999865
Q ss_pred CCCCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCCC-
Q 010525 154 SCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS- 232 (508)
Q Consensus 154 ~C~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~S- 232 (508)
|.|.++|++| +++|.+++|+|+|++. ... +.|||++.+.+..+....+|||||||+..++
T Consensus 120 --------~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~ 180 (383)
T 2x0b_A 120 --------TELTLRYSTG--TVSGFLSQDIITVGGI--------TVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAI 180 (383)
T ss_dssp --------EEEEEECSSC--EEEEEEEEEEEEETTE--------EEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCG
T ss_pred --------cEEEEEcCCc--cEEEEEEeeEEEEcCc--------eEE-EEEEEEEecCCcccccCCCceEeccCCCcccc
Confidence 8999999996 5899999999999875 445 9999999987644344467999999998765
Q ss_pred -----hHHHHHhcCCc-cceeEEeeecC--C----CccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEECCe
Q 010525 233 -----VPSLLAKAGLI-RNSFSMCFDKD--D----SGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCIGSS 296 (508)
Q Consensus 233 -----~~~qL~~~gli-~~~FSl~l~~~--~----~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~Vg~~ 296 (508)
++++|+++|+| +++||+||+++ . .|.|+||++|+.++ .|+|+.. ..+|.|+|++|.||++
T Consensus 181 ~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~----~~~w~v~l~~i~v~~~ 256 (383)
T 2x0b_A 181 GRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKGVSVGSS 256 (383)
T ss_dssp GGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSS----TTSCEEEECEEEESSC
T ss_pred CCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCC----CceEEEEEeEEEeCCc
Confidence 67899999999 89999999875 2 79999999998754 5777742 3799999999999998
Q ss_pred eec-cCccceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcC
Q 010525 297 CLK-QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNN 375 (508)
Q Consensus 297 ~~~-~~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~ 375 (508)
.+. .....+||||||+++++|+++|++|.++|.+.. ..+.....|+. ...+|+|+|+| ||..++|++
T Consensus 257 ~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~------~~g~~~v~C~~-----~~~~P~i~f~~-~g~~~~l~~ 324 (383)
T 2x0b_A 257 TLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKK------RLFDYVVKCNE-----GPTLPDISFHL-GGKEYTLTS 324 (383)
T ss_dssp CCBSTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE------CSSCEEEEGGG-----TTTCCCEEEEE-TTEEEEECH
T ss_pred eEEcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc------cCCcEEEeccc-----cccCceEEEEE-CCEEEEECH
Confidence 753 456789999999999999999999999875432 11223345654 35789999999 788999999
Q ss_pred CeEEEEeeccccEEEE-EEEecC-----CCceEEcceeeeeEEEEEeCCCCEEEEeeCC
Q 010525 376 PVFVIYGTQVVTGFCL-AIQPVD-----GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 428 (508)
Q Consensus 376 ~~~~~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 428 (508)
++|++......+..|+ +|+..+ ++.||||+.|||++|+|||++|+|||||+++
T Consensus 325 ~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 325 ADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp HHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 9998876432245788 687652 4579999999999999999999999999863
No 6
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=4.4e-51 Score=416.55 Aligned_cols=301 Identities=18% Similarity=0.308 Sum_probs=242.3
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc---CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD---CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSC 155 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~---C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C 155 (508)
.+...|..|+|+|++.|++||||+++||+|. |..|.+.. ....|..++.|||++|+||+...
T Consensus 13 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~---~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (334)
T 1j71_A 13 SYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQ---TNNFCKQEGTFDPSSSSSAQNLN------------ 77 (334)
T ss_dssp SEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTC---CTTGGGSSCCBCGGGCTTCEEEE------------
T ss_pred EEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCccccc---ccccccCCCcCCcccCCCcccCC------------
Confidence 4567888999999999999999999999975 54332110 01122356899999999999876
Q ss_pred CCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCC----
Q 010525 156 QNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEI---- 231 (508)
Q Consensus 156 ~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~---- 231 (508)
|.|.+.|++| +.++|.+++|+|+|++. ..+++.|||++... ..+||||||+..+
T Consensus 78 ------~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~ 135 (334)
T 1j71_A 78 ------QDFSIEYGDL-TSSQGSFYKDTVGFGGI--------SIKNQQFADVTTTS-------VDQGIMGIGFTADEAGY 135 (334)
T ss_dssp ------EEEEEEBTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES-------SSSCEEECSCGGGSSTT
T ss_pred ------CceEEEECCC-CEEEEEEEEEEEEECCE--------EEccEEEEEEEecC-------CCccEEEEcCCcccCcc
Confidence 8999999995 67899999999999865 45789999999763 3489999999864
Q ss_pred ----ChHHHHHhcCCc-cceeEEeeecC--CCccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEECCeeecc
Q 010525 232 ----SVPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCIGSSCLKQ 300 (508)
Q Consensus 232 ----S~~~qL~~~gli-~~~FSl~l~~~--~~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~ 300 (508)
+++++|+++|+| +++||+||++. ..|.|+||++|+.++ .|+|++. ..+|.|+|++|.||++.+.
T Consensus 136 ~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~- 210 (334)
T 1j71_A 136 NLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTS----SVELRVHLGSINFDGTSVS- 210 (334)
T ss_dssp CCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCC----SSSCEEEEEEEEETTEEEE-
T ss_pred ccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccC----CCeEEEEEeEEEECCEecc-
Confidence 789999999999 79999999863 569999999998764 4777753 2589999999999999886
Q ss_pred CccceEEccCccceeccHHHHHHHHHHHHHhccCcccccccccc-ccccccccCCCCCCCeEEEEecCCCeEEEcCCeEE
Q 010525 301 TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPW-KCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFV 379 (508)
Q Consensus 301 ~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~-~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~ 379 (508)
....+||||||++++||+++|++|.+++.+... ....... ..|+ .+|.|+|+|.||..++|++++|+
T Consensus 211 ~~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~~~~~~~~~C~--------~~p~i~f~f~~g~~~~i~~~~y~ 278 (334)
T 1j71_A 211 TNADVVLDSGTTITYFSQSTADKFARIVGATWD----SRNEIYRLPSCD--------LSGDAVFNFDQGVKITVPLSELI 278 (334)
T ss_dssp EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEE----TTTTEEECSSSC--------CCSEEEEEESTTCEEEEEGGGGE
T ss_pred CCccEEEeCCCCcEecCHHHHHHHHHHcCCccc----CCCceEEEEcCC--------CCCceEEEEcCCcEEEECHHHhe
Confidence 456899999999999999999999999865442 1111122 4554 37999999987899999999999
Q ss_pred EEeeccccEEEEE-EEecCCCceEEcceeeeeEEEEEeCCCCEEEEeeCCCCCCCCCCccc
Q 010525 380 IYGTQVVTGFCLA-IQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSP 439 (508)
Q Consensus 380 ~~~~~~~~~~Cl~-i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~~~~~~~p 439 (508)
+...+ +..|++ ++.. +.||||++|||++|+|||++++|||||+.+|... .++++
T Consensus 279 ~~~~~--~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~--~~i~~ 333 (334)
T 1j71_A 279 LKDSD--SSICYFGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSS--SDISA 333 (334)
T ss_dssp EECSS--SSCEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSC--CCEEE
T ss_pred eecCC--CCeeEEEEeEC--CCcEEChHhhccEEEEEECCCCEEEEEecCCCCc--cceEE
Confidence 87543 334874 6654 3699999999999999999999999999999853 34454
No 7
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.1e-50 Score=414.35 Aligned_cols=298 Identities=19% Similarity=0.311 Sum_probs=244.7
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEe-----cc-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIP-----CD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLG 152 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~-----c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 152 (508)
.+...|..|+|+|++.|++||||+++||+ |. |..|.. ++.|||++|+||+.+.
T Consensus 13 ~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~------------~~~y~~~~SsT~~~~~--------- 71 (339)
T 3fv3_A 13 SYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKS------------SGTFTPSSSSSYKNLG--------- 71 (339)
T ss_dssp SEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTT------------TCCBCGGGCTTCEEEE---------
T ss_pred EEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCC------------CCcCCCccCcceeeCC---------
Confidence 45677889999999999999999999998 54 445643 4799999999999876
Q ss_pred CCCCCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCCC
Q 010525 153 TSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS 232 (508)
Q Consensus 153 ~~C~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~S 232 (508)
|.|.+.|++| +.++|.+++|+|+|++. ..+++.|||++...+ .+||||||+..++
T Consensus 72 ---------~~~~i~Yg~g-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~-------~~GilGLg~~~~~ 126 (339)
T 3fv3_A 72 ---------AAFTIRYGDG-STSQGTWGKDTVTINGV--------SITGQQIADVTQTSV-------DQGILGIGYTSNE 126 (339)
T ss_dssp ---------EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEESS-------SSCEEECSCGGGC
T ss_pred ---------ceEEEEECCC-ceEEEEEEEEEEEECCE--------EECceEEEEEEecCC-------CceeEEecCcccc
Confidence 8999999995 88999999999999976 457899999998764 3899999998643
Q ss_pred ----------------hHHHHHhcCCc-cceeEEeeecC--CCccEEeccCCCCC----ceEeeeEEcCCCceeEEEEee
Q 010525 233 ----------------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVE 289 (508)
Q Consensus 233 ----------------~~~qL~~~gli-~~~FSl~l~~~--~~G~i~fG~~d~~~----~~~tp~v~~~~~~~~y~V~l~ 289 (508)
++++|+++|+| +++||+||++. ..|.|+||++|+.+ +.|+|++. ..+|.|+++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~ 202 (339)
T 3fv3_A 127 AVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTS----SQALTISLA 202 (339)
T ss_dssp CCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCC----SSSCEEEEE
T ss_pred ccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEeccc----CccEEEEEE
Confidence 78999999999 79999999875 36999999999875 45888853 258999999
Q ss_pred eEEECCeeeccCccceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCC
Q 010525 290 TCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNN 369 (508)
Q Consensus 290 ~i~Vg~~~~~~~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~ 369 (508)
+|.||++.+. ....++|||||++++||+++|++|.+++........ .........|+. ..+|.|+|+|.+|.
T Consensus 203 ~i~v~g~~~~-~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~-~~~~~~~~~C~~------~~~p~i~f~f~~g~ 274 (339)
T 3fv3_A 203 SVNLKGSSFS-FGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVA-RDQYLYFIDCNT------DTSGTTVFNFGNGA 274 (339)
T ss_dssp EEEESSCEEE-EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEE-TTEEEEEECTTC------CCCSEEEEEETTSC
T ss_pred EEEECCEeec-CCccEEEeCCCCCEecCHHHHHHHHHHcCCEEcccc-ccCceEEEecCC------CCCCcEEEEECCCC
Confidence 9999999887 446899999999999999999999999864432110 011223345653 36899999997688
Q ss_pred eEEEcCCeEEEEeeccccEEEEEEEecCCCceEEcceeeeeEEEEEeCCCCEEEEeeCCCCCCCCCCcccC
Q 010525 370 SFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPL 440 (508)
Q Consensus 370 ~~~i~~~~~~~~~~~~~~~~Cl~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~~~~~~~p~ 440 (508)
.++|++++|+++... +.|+++|++ .+.||||+.|||++|+|||++++|||||+.+|++. .+++||
T Consensus 275 ~~~v~~~~~~~~~~~--~~C~~~i~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~--s~i~~i 339 (339)
T 3fv3_A 275 KITVPNTEYVYQNGD--GTCLWGIQP--SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTTD--SSISAV 339 (339)
T ss_dssp EEEEEGGGGEEECSS--SCEEESEEE--CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSC--CCEEEC
T ss_pred EEEECHHHheeeCCC--CeEEEEEEe--CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCCc--cceEEC
Confidence 999999999987532 445578887 35799999999999999999999999999999853 455654
No 8
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=7.8e-51 Score=412.97 Aligned_cols=290 Identities=18% Similarity=0.350 Sum_probs=241.0
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc-CC--CCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CV--RCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSC 155 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~--~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C 155 (508)
.+...|..|+|+|++.|++||||+++||+|. |. .|.. ++.|||++|+|++...
T Consensus 13 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~------------~~~y~~~~SsT~~~~~------------ 68 (324)
T 1am5_A 13 EYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSN------------HNKFKPRQSSTYVETG------------ 68 (324)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHT------------SCCBCGGGCTTCEEEE------------
T ss_pred EEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccC------------CCcCCCccCCCeEeCC------------
Confidence 3566788899999999999999999999998 86 4643 4699999999999866
Q ss_pred CCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCC----
Q 010525 156 QNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEI---- 231 (508)
Q Consensus 156 ~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~---- 231 (508)
|.|.+.|++| ++.|.+++|+|+|++. ..+++.|||++.+++.++.....+||||||+..+
T Consensus 69 ------~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 132 (324)
T 1am5_A 69 ------KTVDLTYGTG--GMRGILGQDTVSVGGG--------SDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAG 132 (324)
T ss_dssp ------EEEEEECSSC--EEEEEEEEEEEESSSS--------CEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGG
T ss_pred ------cEEEEEECCC--CeEEEEEECceeECCc--------EEcccEEEEEEecccccccCCCCceEEecCCccccccC
Confidence 8999999996 5699999999999876 4478999999998776544446799999999865
Q ss_pred --ChHHHHHhcCCc-cceeEEeeecC--CCccEEeccCCCCC----ceEeeeEEcCCCceeEEEEeeeEEECCeeeccCc
Q 010525 232 --SVPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCCIGSSCLKQTS 302 (508)
Q Consensus 232 --S~~~qL~~~gli-~~~FSl~l~~~--~~G~i~fG~~d~~~----~~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~~~ 302 (508)
+++++|+++|+| +++||+||++. ..|.|+||++|+.+ +.|+|++. ..+|.|+|++|.||++.+....
T Consensus 133 ~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~ 208 (324)
T 1am5_A 133 AVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTA----EKYWQVALDGITVNGQTAACEG 208 (324)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEE----ETTEEEEECEEEETTEECCCCC
T ss_pred CCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCC----CcEEEEEEeEEEECCceeeccC
Confidence 467899999999 89999999875 37999999999864 46999864 3689999999999998864233
Q ss_pred cceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEEEEe
Q 010525 303 FKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYG 382 (508)
Q Consensus 303 ~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~~~~ 382 (508)
..+||||||++++||+++|++|.+++.+. . ..+.....|+. ...+|+|+|+| +|..++|++++|++..
T Consensus 209 ~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-----~-~~g~~~~~C~~-----~~~~P~i~f~f-~g~~~~i~~~~y~~~~ 276 (324)
T 1am5_A 209 CQAIVDTGTSKIVAPVSALANIMKDIGAS-----E-NQGEMMGNCAS-----VQSLPDITFTI-NGVKQPLPPSAYIEGD 276 (324)
T ss_dssp EEEEECTTCSSEEECTTTHHHHHHHHTCE-----E-CCCCEECCTTS-----SSSSCCEEEEE-TTEEEEECHHHHEEES
T ss_pred ceEEEecCCccEECCHHHHHHHHHHhCCc-----c-cCCcEEEeCCC-----cccCCcEEEEE-CCEEEEECHHHhcccC
Confidence 78999999999999999999999987543 1 11122334543 45789999999 6889999999999875
Q ss_pred eccccEEEE-EEEecC-----CCceEEcceeeeeEEEEEeCCCCEEEEeeCC
Q 010525 383 TQVVTGFCL-AIQPVD-----GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 428 (508)
Q Consensus 383 ~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 428 (508)
+..|+ +|+..+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 277 ----~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 277 ----QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp ----SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred ----CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 34677 687653 4579999999999999999999999999864
No 9
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.3e-50 Score=411.42 Aligned_cols=291 Identities=23% Similarity=0.384 Sum_probs=240.1
Q ss_pred CceeeeecCCCceeEeccccCCceeEEecc-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCC
Q 010525 80 QFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNP 158 (508)
Q Consensus 80 ~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~~ 158 (508)
+...|..++|+|++.|++||||+++||+|. |..| .+ .++.|||++|+||+...
T Consensus 17 Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~----------~~~~y~~~~SsT~~~~~--------------- 70 (325)
T 2apr_A 17 YYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GS----------GQTKYDPNQSSTYQADG--------------- 70 (325)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CT----------TSCCBCGGGCTTCEEEE---------------
T ss_pred EEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hc----------CCCCCCcccCCCeeeCC---------------
Confidence 566788899999999999999999999998 9888 22 35799999999999754
Q ss_pred CCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCC-------
Q 010525 159 KQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEI------- 231 (508)
Q Consensus 159 ~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~------- 231 (508)
|.|.+.|++| +.++|.+++|+|+|++. ...++.|||++.+++.|... ..+||||||+..+
T Consensus 71 ---~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~f~~~-~~~GilGLg~~~~s~~~~~~ 137 (325)
T 2apr_A 71 ---RTWSISYGDG-SSASGILAKDNVNLGGL--------LIKGQTIELAKREAASFASG-PNDGLLGLGFDTITTVRGVK 137 (325)
T ss_dssp ---EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTS-SCSEEEECSCGGGCSSTTCC
T ss_pred ---CEEEEEECCC-CCEEEEEEEEEEEECCE--------EECcEEEEEEeccCcccccC-CCceEEEeCCcccccccCCC
Confidence 8999999995 67999999999999875 45789999999887655433 3699999999865
Q ss_pred ChHHHHHhcCCc-cceeEEeeec---CCCccEEeccCCCCC----ceEeeeEEcCCCceeEEEEeeeEEECCeeeccCcc
Q 010525 232 SVPSLLAKAGLI-RNSFSMCFDK---DDSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSF 303 (508)
Q Consensus 232 S~~~qL~~~gli-~~~FSl~l~~---~~~G~i~fG~~d~~~----~~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~~~~ 303 (508)
+++++|+++|+| +++||+||++ ...|.|+||++|+.+ +.|+|++. ...+|.|++++|.||+ .+....+
T Consensus 138 ~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~~v~l~~i~vg~-~~~~~~~ 213 (325)
T 2apr_A 138 TPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDN---SRGWWGITVDRATVGT-STVASSF 213 (325)
T ss_dssp CHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBC---TTSSCEEEECEEEETT-EEEECCE
T ss_pred CHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccC---CCCEEEEEEeEEEECC-EecCCCc
Confidence 378999999998 8999999954 357999999999864 46888853 2468999999999999 4444677
Q ss_pred ceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEEEEee
Q 010525 304 KAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGT 383 (508)
Q Consensus 304 ~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~~~~~ 383 (508)
.+||||||++++||+++|+++.+++.+++... ......|+. ..+|+|+|+|.|+ .+.|++++|++...
T Consensus 214 ~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~-----g~~~~~C~~------~~~p~i~f~f~g~-~~~ip~~~~~~~~~ 281 (325)
T 2apr_A 214 DGILDTGTTLLILPNNIAASVARAYGASDNGD-----GTYTISCDT------SAFKPLVFSINGA-SFQVSPDSLVFEEF 281 (325)
T ss_dssp EEEECTTCSSEEEEHHHHHHHHHHHTCEECSS-----SCEEECSCG------GGCCCEEEEETTE-EEEECGGGGEEEEE
T ss_pred eEEEecCCccEECCHHHHHHHHHHHhcccCCC-----CeEEEECCC------CCCCcEEEEECCE-EEEECHHHEEEcCC
Confidence 89999999999999999999999987765432 122335652 2489999999554 99999998887654
Q ss_pred ccccEEEEE-EEecCCCceEEcceeeeeEEEEEeCCCCEEEEeeCC
Q 010525 384 QVVTGFCLA-IQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 428 (508)
Q Consensus 384 ~~~~~~Cl~-i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 428 (508)
+..|++ |+..+.+.||||+.|||++|+|||++++|||||+..
T Consensus 282 ---~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 282 ---QGQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp ---TTEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ---CCeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 457876 666555689999999999999999999999999863
No 10
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=6.4e-51 Score=414.47 Aligned_cols=298 Identities=19% Similarity=0.260 Sum_probs=239.8
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQN 157 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~ 157 (508)
.+...|..++|+|++.|++||||+++||+|. |..|..+ .++.|||++|+|++.++
T Consensus 16 ~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~----------~~~~y~~~~SsT~~~~~-------------- 71 (329)
T 3c9x_A 16 EYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSAT----------GHAIYTPSKSSTSKKVS-------------- 71 (329)
T ss_dssp CEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHT----------TSCCBCGGGCTTCEECT--------------
T ss_pred EEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccC----------CCCcCCcccCcCceEcC--------------
Confidence 3566788899999999999999999999998 9877532 35799999999999865
Q ss_pred CCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCCC-----
Q 010525 158 PKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS----- 232 (508)
Q Consensus 158 ~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~S----- 232 (508)
.|.|.+.|++| +.++|.+++|+|+|++. ..+++.|||++.+++.|......|||||||+..++
T Consensus 72 ---~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~ 139 (329)
T 3c9x_A 72 ---GASWSISYGDG-SSSSGDVYTDKVTIGGF--------SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPH 139 (329)
T ss_dssp ---TCBEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSS
T ss_pred ---CCeEEEEeCCC-CcEEEEEEEEEEEECCE--------EEcceEEEEEEecCccccccCCCceeEEeCcccccccCCC
Confidence 48999999995 66999999999999875 45789999999887655433356999999997543
Q ss_pred ----hHHHHHhcCCccceeEEeeecCCCccEEeccCCCCC----ceEeeeEEcCCCceeEEEEeeeEEECCeeeccCccc
Q 010525 233 ----VPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFK 304 (508)
Q Consensus 233 ----~~~qL~~~gli~~~FSl~l~~~~~G~i~fG~~d~~~----~~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~~~~~ 304 (508)
++++|+++ +.+++||+||.++..|.|+||++|+.+ +.|+|++. ...+|.|+|++|.||++.+....+.
T Consensus 140 ~~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~~v~l~~i~v~~~~~~~~~~~ 215 (329)
T 3c9x_A 140 PQKTWFSNAASS-LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDN---SQGFWEFTASGYSVGGGKLNRNSID 215 (329)
T ss_dssp CCCCHHHHHHTT-SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBC---TTSSCEEEECCEEETTCCCCSCCEE
T ss_pred CCCCHHHHHHHh-cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccC---CCceEEEEEeeEEECCEeccCCCce
Confidence 67888876 338999999998778999999999864 46888853 2468999999999999888766789
Q ss_pred eEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEEEEeec
Q 010525 305 AIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQ 384 (508)
Q Consensus 305 aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~~~~~~ 384 (508)
+||||||++++||+++|++|.+++... ............|+ ..+|+|+|+| +|..+.|++++|++....
T Consensus 216 aiiDSGTt~~~lp~~~~~~i~~~i~~a---~~~~~~~~~~~~C~-------~~~P~i~f~f-~g~~~~ip~~~~~~~~~~ 284 (329)
T 3c9x_A 216 GIADTGTTLLLLDDNVVDAYYANVQSA---QYDNQQEGVVFDCD-------EDLPSFSFGV-GSSTITIPGDLLNLTPLE 284 (329)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTCTTC---EEETTTTEEEEETT-------CCCCCEEEEE-TTEEEEECGGGGEEEESS
T ss_pred EEEECCCCcEeCCHHHHHHHHHhCCCc---EEcCCCCEEEEECC-------CCCCcEEEEE-CCEEEEECHHHeeeeccC
Confidence 999999999999999999988775221 11111112223565 3689999999 578999999988876532
Q ss_pred cccEEEEE-EEecC-CCceEEcceeeeeEEEEEeCCCCEEEEeeC
Q 010525 385 VVTGFCLA-IQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHS 427 (508)
Q Consensus 385 ~~~~~Cl~-i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 427 (508)
.....|++ |+..+ .+.||||+.|||++|+|||++++|||||+.
T Consensus 285 ~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 285 EGSSTCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp TTCSEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CCCCeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 12367886 77654 468999999999999999999999999974
No 11
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=8.2e-51 Score=422.12 Aligned_cols=319 Identities=20% Similarity=0.295 Sum_probs=253.2
Q ss_pred CceeeeecCCCceeEeccccCCceeEEecc-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCC
Q 010525 80 QFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNP 158 (508)
Q Consensus 80 ~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~~ 158 (508)
+...|..|+|+|++.|++||||+++||+|. |..| ++.|||++|+||+...
T Consensus 15 Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~--------------~~~f~~~~SsT~~~~~--------------- 65 (383)
T 2ewy_A 15 YYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI--------------DTYFDTERSSTYRSKG--------------- 65 (383)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB--------------SCCCCGGGCTTCEEEE---------------
T ss_pred EEEEEEecCCCceEEEEEecCCCceEEecCCCCcc--------------ccCcccccCccceeCC---------------
Confidence 567788999999999999999999999997 7655 2689999999999876
Q ss_pred CCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCCC------
Q 010525 159 KQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS------ 232 (508)
Q Consensus 159 ~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~S------ 232 (508)
|.|.+.|++| +++|.+++|+|+|++.. .....+.|+|.....+.|......|||||||+..++
T Consensus 66 ---~~~~i~Yg~G--s~~G~~~~Dtv~i~~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~ 134 (383)
T 2ewy_A 66 ---FDVTVKYTQG--SWTGFVGEDLVTIPKGF------NTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSL 134 (383)
T ss_dssp ---EEEEEECSSC--EEEEEEEEEEEEETTTE------EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTS
T ss_pred ---ceEEEEECCc--EEEEEEEEEEEEECCCc------cceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccc
Confidence 8899999996 57999999999998641 122357789988776655444467999999997653
Q ss_pred --hHHHHHhcCCccceeEEeeec---------CCCccEEeccCCCCC----ceEeeeEEcCCCceeEEEEeeeEEECCee
Q 010525 233 --VPSLLAKAGLIRNSFSMCFDK---------DDSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCCIGSSC 297 (508)
Q Consensus 233 --~~~qL~~~gli~~~FSl~l~~---------~~~G~i~fG~~d~~~----~~~tp~v~~~~~~~~y~V~l~~i~Vg~~~ 297 (508)
++++|++|+.++++||+||++ ...|.|+||++|+.+ +.|+|++. ..+|.|.|++|.||++.
T Consensus 135 ~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~ 210 (383)
T 2ewy_A 135 ETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKE----EWYYQIEILKLEIGGQS 210 (383)
T ss_dssp CCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSS----BTTBBCCEEEEEETTEE
T ss_pred cCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCC----CceEEEEEEEEEECCEE
Confidence 567899988888899999963 247999999999764 46888853 36899999999999998
Q ss_pred ecc--C---ccceEEccCccceeccHHHHHHHHHHHHHhccCcccccc--ccccccccccccCCCCCCCeEEEEecCCC-
Q 010525 298 LKQ--T---SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFE--GYPWKCCYKSSSQRLPKLPSVKLMFPQNN- 369 (508)
Q Consensus 298 ~~~--~---~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~--~~~~~~C~~~~~~~~~~~P~i~f~f~g~~- 369 (508)
+.. . ...+||||||++++||+++|++|.++|.+.......... ......|+......+..+|+|+|+|.|+.
T Consensus 211 ~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~ 290 (383)
T 2ewy_A 211 LNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENS 290 (383)
T ss_dssp CCCCTTTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSST
T ss_pred ccccccccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEECCCCC
Confidence 752 2 357999999999999999999999999876543211111 12346798765444557899999997642
Q ss_pred ----eEEEcCCeEEEEeec-cccEEEEE--EEecCCCceEEcceeeeeEEEEEeCCCCEEEEeeCCCCCCCCCCcccCCC
Q 010525 370 ----SFVVNNPVFVIYGTQ-VVTGFCLA--IQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTP 442 (508)
Q Consensus 370 ----~~~i~~~~~~~~~~~-~~~~~Cl~--i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~~~~~~~p~~~ 442 (508)
++++++++|+..... +.+..|++ +.+.+ +.||||+.|||++|+|||++++|||||+.+|...++.+++++.+
T Consensus 291 ~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~~-~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~i~~i~g 369 (383)
T 2ewy_A 291 SRSFRITILPQLYIQPMMGAGLNYECYRFGISPST-NALVIGATVMEGFYVIFDRAQKRVGFAASPCAEIAGAAVSEISG 369 (383)
T ss_dssp TEEEEEEECHHHHEEEECCCTTCSEEEEESEEEES-SCEEECHHHHTTEEEEEETTTTEEEEEECTTCBSSSCBCEEEEE
T ss_pred CceEEEEEChHHheeecccCCCCceeEEEEecCCC-CcEEEChHHhCCeeEEEECCCCeEEEEeccCCCcCCcceeeecC
Confidence 688999999877532 12457875 45543 57999999999999999999999999999999877778888866
Q ss_pred C
Q 010525 443 G 443 (508)
Q Consensus 443 ~ 443 (508)
+
T Consensus 370 ~ 370 (383)
T 2ewy_A 370 P 370 (383)
T ss_dssp E
T ss_pred C
Confidence 4
No 12
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=8.2e-51 Score=413.67 Aligned_cols=291 Identities=21% Similarity=0.351 Sum_probs=239.5
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc-CCC--CCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CVR--CAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSC 155 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~~--C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C 155 (508)
.+...|..++|+|++.|++||||+++||+|. |.. |.. ++.|||++|+||+...
T Consensus 14 ~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~------------~~~y~~~~SsT~~~~~------------ 69 (329)
T 1dpj_A 14 QYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFL------------HSKYDHEASSSYKANG------------ 69 (329)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT------------SCCBCGGGCTTCEEEE------------
T ss_pred EEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCC------------cCcCCcccCcCeEECC------------
Confidence 3567788899999999999999999999998 876 643 3689999999999755
Q ss_pred CCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCCC---
Q 010525 156 QNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS--- 232 (508)
Q Consensus 156 ~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~S--- 232 (508)
|.|.+.|++| +++|.+++|+|+|++. ..+++.|||++.+.+..+.....|||||||+..++
T Consensus 70 ------~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~ 133 (329)
T 1dpj_A 70 ------TEFAIQYGTG--SLEGYISQDTLSIGDL--------TIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDK 133 (329)
T ss_dssp ------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGG
T ss_pred ------cEEEEEECCc--eEEEEEEEEEEEECCe--------EECCeEEEEEEecCccccccCCcceEEEeCCchhhccC
Confidence 8999999996 7899999999999865 45789999999877622222346999999998765
Q ss_pred ---hHHHHHhcCCc-cceeEEeeecC-----CCccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEECCeeec
Q 010525 233 ---VPSLLAKAGLI-RNSFSMCFDKD-----DSGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCIGSSCLK 299 (508)
Q Consensus 233 ---~~~qL~~~gli-~~~FSl~l~~~-----~~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~ 299 (508)
++.+|+++|+| +++||+||++. ..|.|+||++|+.++ .|+|+.. ..+|.|+|++|.||++.+.
T Consensus 134 ~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~ 209 (329)
T 1dpj_A 134 VVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRR----KAYWEVKFEGIGLGDEYAE 209 (329)
T ss_dssp CCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTEEEE
T ss_pred CCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCC----CceEEEEeeeEEECCeEec
Confidence 45789999999 89999999764 369999999998654 4777742 3689999999999999887
Q ss_pred cCccceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEE
Q 010525 300 QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFV 379 (508)
Q Consensus 300 ~~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~ 379 (508)
.....+||||||++++||+++|++|.+++... .. ...||..+|.....+|+|+|+| +|..++|++++|+
T Consensus 210 ~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~-----~~-----~~g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~y~ 278 (329)
T 1dpj_A 210 LESHGAAIDTGTSLITLPSGLAEMINAEIGAK-----KG-----WTGQYTLDCNTRDNLPDLIFNF-NGYNFTIGPYDYT 278 (329)
T ss_dssp CSSCEEEECTTCSCEEECHHHHHHHHHHHTCE-----EC-----TTSSEEECGGGGGGCCCEEEEE-TTEEEEECTTTSE
T ss_pred CCCccEEeeCCCCcEECCHHHHHHHHHHhCCc-----cC-----CCCeEEEECCCCCcCCcEEEEE-CCEEEEECHHHhE
Confidence 66788999999999999999999999987532 11 1224555555445789999999 6789999999999
Q ss_pred EEeeccccEEEE-EEEec-----CCCceEEcceeeeeEEEEEeCCCCEEEEeeCC
Q 010525 380 IYGTQVVTGFCL-AIQPV-----DGDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 428 (508)
Q Consensus 380 ~~~~~~~~~~Cl-~i~~~-----~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 428 (508)
+... ..|+ +|+.. .++.||||+.|||++|+|||++++|||||+.+
T Consensus 279 ~~~~----~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 279 LEVS----GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EEET----TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ecCC----CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 8752 4687 67764 24689999999999999999999999999864
No 13
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1.3e-50 Score=422.21 Aligned_cols=318 Identities=19% Similarity=0.215 Sum_probs=252.9
Q ss_pred CceeeeecCCCceeEeccccCCceeEEecc-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCC
Q 010525 80 QFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNP 158 (508)
Q Consensus 80 ~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~~ 158 (508)
+...|..|+|+|++.|++||||+++||+|. |..| ++.|||++|+||+...
T Consensus 23 Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~--------------~~~y~~~~SsT~~~~~--------------- 73 (395)
T 2qp8_A 23 YYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL--------------HRYYQRQLSSTYRDLR--------------- 73 (395)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC--------------SCCCCGGGCTTCEEEE---------------
T ss_pred EEEEEEecCCCceEEEEEecCCCceEEECCCCccc--------------cCCcCcccCCCceeCC---------------
Confidence 566788999999999999999999999998 7554 3689999999999876
Q ss_pred CCCCCeeeecCCCCceeeeEEEEEEEEecc-CCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCC------
Q 010525 159 KQPCPYTMDYYTENTSSSGLLVEDILHLIS-GGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEI------ 231 (508)
Q Consensus 159 ~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~-~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~------ 231 (508)
|.|.+.|++| +++|.+++|+|+|++ .. ....+.|+|+....+.|......|||||||+..+
T Consensus 74 ---~~~~i~Yg~G--s~~G~~~~Dtv~ig~g~~-------~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~ 141 (395)
T 2qp8_A 74 ---KGVYVPYTQG--KWEGELGTDLVSIPHGPN-------VTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDS 141 (395)
T ss_dssp ---EEEEEECSSC--EEEEEEEEEEEECTTSCS-------CEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTT
T ss_pred ---ceEEEEECCc--EEEEEEEeEEEEECCCCC-------ceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCC
Confidence 8899999996 568999999999984 31 2224678888776665544446799999999764
Q ss_pred --ChHHHHHhcCCccceeEEeeec------------CCCccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEE
Q 010525 232 --SVPSLLAKAGLIRNSFSMCFDK------------DDSGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCI 293 (508)
Q Consensus 232 --S~~~qL~~~gli~~~FSl~l~~------------~~~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~V 293 (508)
+++++|+++++|.++||+||++ ...|.|+||++|+.++ .|+|++. ..+|.|.|++|.|
T Consensus 142 ~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v 217 (395)
T 2qp8_A 142 LEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEI 217 (395)
T ss_dssp SCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCEEEEEE
T ss_pred CCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCC----CceEEEEEEEEEE
Confidence 4668999999998899999974 2579999999998753 5778743 3689999999999
Q ss_pred CCeeecc--C---ccceEEccCccceeccHHHHHHHHHHHHHhccCcccccc--ccccccccccccCCCCCCCeEEEEec
Q 010525 294 GSSCLKQ--T---SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFE--GYPWKCCYKSSSQRLPKLPSVKLMFP 366 (508)
Q Consensus 294 g~~~~~~--~---~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~--~~~~~~C~~~~~~~~~~~P~i~f~f~ 366 (508)
|++.+.. . ...+||||||++++||+++|++|.++|............ ......|+......+..+|+|+|+|.
T Consensus 218 ~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~ 297 (395)
T 2qp8_A 218 NGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLM 297 (395)
T ss_dssp TTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEE
T ss_pred CCEEcccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEEEEc
Confidence 9998752 1 357999999999999999999999999876543221110 11235798765444557999999997
Q ss_pred CCC-----eEEEcCCeEEEEeec--cccEEEE--EEEecCCCceEEcceeeeeEEEEEeCCCCEEEEeeCCCCCCCCCCc
Q 010525 367 QNN-----SFVVNNPVFVIYGTQ--VVTGFCL--AIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTK 437 (508)
Q Consensus 367 g~~-----~~~i~~~~~~~~~~~--~~~~~Cl--~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~~~~~~ 437 (508)
|+. ++++++++|++.... +....|+ ++++.+ +.||||+.|||++|+|||++++|||||+.+|...++.++
T Consensus 298 g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~-~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~i 376 (395)
T 2qp8_A 298 GEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSS-TGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRT 376 (395)
T ss_dssp CSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEES-SCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSSCC
T ss_pred cCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCCC-CcEEEChHHhCCeeEEEECCCCEEEEEeccCCCCCCCcc
Confidence 654 689999999887542 1234786 566543 579999999999999999999999999999998877888
Q ss_pred ccCCCC
Q 010525 438 SPLTPG 443 (508)
Q Consensus 438 ~p~~~~ 443 (508)
+++.++
T Consensus 377 ~~i~g~ 382 (395)
T 2qp8_A 377 AAVEGP 382 (395)
T ss_dssp CEEEEE
T ss_pred ceecCC
Confidence 888764
No 14
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.2e-50 Score=414.71 Aligned_cols=307 Identities=17% Similarity=0.301 Sum_probs=243.3
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc---CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD---CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSC 155 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~---C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C 155 (508)
.+...|..|+|+|++.|++||||+++||+|. |..|..... ...|..++.|||++|+||+...
T Consensus 13 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~---~~~C~~~~~y~~~~SsT~~~~~------------ 77 (342)
T 2qzx_A 13 TYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDK---GDFCKSAGSYSPASSRTSQNLN------------ 77 (342)
T ss_dssp CEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCC---TTGGGTTCCBCGGGCTTCEEEE------------
T ss_pred EEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCc---cccccCCCcCCcccCCCcccCC------------
Confidence 4567788999999999999999999999965 554422110 1112356899999999999876
Q ss_pred CCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCC----
Q 010525 156 QNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEI---- 231 (508)
Q Consensus 156 ~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~---- 231 (508)
|.|.+.|++| +.++|.+++|+|+|++. ...++.|||++... ..+||||||+..+
T Consensus 78 ------~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~ 135 (342)
T 2qzx_A 78 ------TRFDIKYGDG-SYAKGKLYKDTVGIGGV--------SVRDQLFANVWSTS-------ARKGILGIGFQSGEATE 135 (342)
T ss_dssp ------EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSS
T ss_pred ------CcEEEEeCCC-CeEEEEEEEEEEEECCE--------EecceEEEEEEecC-------CCcCEEEEccccccCCC
Confidence 8999999995 67899999999999865 45789999999764 3489999999754
Q ss_pred ----ChHHHHHhcCCc-cceeEEeeecC--CCccEEeccCCCCC----ceEeeeEEcCCCceeEEEEeeeEEECCeeecc
Q 010525 232 ----SVPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCCIGSSCLKQ 300 (508)
Q Consensus 232 ----S~~~qL~~~gli-~~~FSl~l~~~--~~G~i~fG~~d~~~----~~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~ 300 (508)
+++++|+++|+| +++||+||++. ..|.|+||++|+.+ +.|+|++. ..+|.|+|++|.||++.+.
T Consensus 136 ~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~- 210 (342)
T 2qzx_A 136 FDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITS----EKKLTVGLRSVNVRGRNVD- 210 (342)
T ss_dssp SCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC----SSSCEEEEEEEEETTEEEE-
T ss_pred ccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccC----CceEEEEEeEEEECCEecC-
Confidence 789999999999 79999999863 46999999999865 45888853 2589999999999999886
Q ss_pred CccceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEEE
Q 010525 301 TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVI 380 (508)
Q Consensus 301 ~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~~ 380 (508)
....+||||||++++||+++|++|.+++.+.....+. ... .|..+|. .+|.|+|+|.||..++|++++|++
T Consensus 211 ~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~-~~~-----~~~~~C~---~~p~i~f~f~~g~~~~i~~~~~~~ 281 (342)
T 2qzx_A 211 ANTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSA-GNK-----VYVADCK---TSGTIDFQFGNNLKISVPVSEFLF 281 (342)
T ss_dssp EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTT-SCE-----EEEECTT---CCCEEEEEETTTEEEEEEGGGGEE
T ss_pred CCcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccC-CCc-----EEEEECC---CCCcEEEEECCCcEEEEcHHHhcc
Confidence 4568999999999999999999999998654421111 111 2233342 379999999878899999999998
Q ss_pred Eee---ccccEEEEE-EEecCCCceEEcceeeeeEEEEEeCCCCEEEEeeCCCCCCCCCCcccC
Q 010525 381 YGT---QVVTGFCLA-IQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPL 440 (508)
Q Consensus 381 ~~~---~~~~~~Cl~-i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~~~~~~~p~ 440 (508)
... ......|++ ++.. +.||||++|||++|+|||++++|||||+.+|... .+++++
T Consensus 282 ~~~~~~~~~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~--~~i~~i 341 (342)
T 2qzx_A 282 QTYYTSGKPFPKCEVRIRES--EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTSE--SDIVAI 341 (342)
T ss_dssp CCBCTTSCBCSSEEESEEEC--SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSC--CCEEEC
T ss_pred cccccCCCCCCccEEEEecC--CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCCC--CCeEEc
Confidence 632 111356875 5554 3699999999999999999999999999999753 455665
No 15
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1e-50 Score=419.21 Aligned_cols=293 Identities=22% Similarity=0.358 Sum_probs=239.4
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQN 157 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~ 157 (508)
.+...|..|+|+|++.|++||||+++||+|. |..|. |..++.|||++|+||+...
T Consensus 57 ~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~----------C~~~~~y~~~~SsT~~~~~-------------- 112 (370)
T 3psg_A 57 EYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLA----------CSDHNQFNPDDSSTFEATS-------------- 112 (370)
T ss_dssp CEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGG----------GTTSCCBCGGGCTTCEEEE--------------
T ss_pred EEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcc----------cCCCCCCCCccCcCcEECC--------------
Confidence 4567889999999999999999999999998 86532 1235799999999999876
Q ss_pred CCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCC------
Q 010525 158 PKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEI------ 231 (508)
Q Consensus 158 ~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~------ 231 (508)
|.|.+.|++| +++|.+++|+|+|++. ...++.|||++.+.+.++.....|||||||++.+
T Consensus 113 ----~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~ 178 (370)
T 3psg_A 113 ----QELSITYGTG--SMTGILGYDTVQVGGI--------SDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGAT 178 (370)
T ss_dssp ----EEEEEESSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCC
T ss_pred ----cEEEEEeCCc--eEEEEEEEEEEeeCCc--------ccCCeEEEEEEeecccccccCCccceeccCCccccccCCC
Confidence 8999999996 5899999999999876 4578999999988775545456799999999865
Q ss_pred ChHHHHHhcCCc-cceeEEeeecC--CCccEEeccCCCCC----ceEeeeEEcCCCceeEEEEeeeEEECCeeec-cCcc
Q 010525 232 SVPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCCIGSSCLK-QTSF 303 (508)
Q Consensus 232 S~~~qL~~~gli-~~~FSl~l~~~--~~G~i~fG~~d~~~----~~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~-~~~~ 303 (508)
+++++|+++|+| +++||+||+++ ..|.|+||++|+.+ +.|+|+.. ..+|.|.+++|.||++.+. ....
T Consensus 179 ~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~----~~~w~v~l~~i~v~g~~~~~~~~~ 254 (370)
T 3psg_A 179 PVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSV----EGYWQITLDSITMDGETIACSGGC 254 (370)
T ss_dssp CHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSE----ETTEEEEECEEESSSSEEECTTCE
T ss_pred CHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecccc----cceeEEEEeEEEECCEEEecCCCc
Confidence 467899999999 89999999975 47999999999864 46888854 3689999999999998775 3567
Q ss_pred ceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEEEEee
Q 010525 304 KAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGT 383 (508)
Q Consensus 304 ~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~~~~~ 383 (508)
.+||||||+++++|++++++|.+++.... ...+ +|..+|.....+|+|+|+| ||..++|++++|++. .
T Consensus 255 ~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----~~~g-----~~~v~C~~~~~lP~i~f~~-~g~~~~l~~~~yi~~-~ 322 (370)
T 3psg_A 255 QAIVDTGTSLLTGPTSAIANIQSDIGASE-----NSDG-----EMVISCSSIDSLPDIVFTI-DGVQYPLSPSAYILQ-D 322 (370)
T ss_dssp EEEECTTCCSEEEEHHHHHHHHHHTTCEE-----CTTC-----CEECCGGGGGGCCCEEEEE-TTEEEEECHHHHEEE-C
T ss_pred eEEEcCCCCcEECCHHHHHHHHHHhCCcc-----cCCC-----cEEEECCCcccCCcEEEEE-CCEEEEECHHHhccc-C
Confidence 89999999999999999999988864321 1111 2444454445789999999 788999999999987 2
Q ss_pred ccccEEEE-EEEecC-----CCceEEcceeeeeEEEEEeCCCCEEEEeeCC
Q 010525 384 QVVTGFCL-AIQPVD-----GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 428 (508)
Q Consensus 384 ~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 428 (508)
...|+ +++..+ ++.||||++|||++|+|||++|+|||||++.
T Consensus 323 ---~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 323 ---DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp ---SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ---CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 23487 576643 2369999999999999999999999999863
No 16
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.1e-50 Score=412.68 Aligned_cols=291 Identities=21% Similarity=0.382 Sum_probs=240.9
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc-CCC--CCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CVR--CAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSC 155 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~~--C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C 155 (508)
.+...|..|+|+|++.|++||||+++||+|. |.. |.. ++.|||++|+|++...
T Consensus 13 ~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~------------~~~y~~~~SsT~~~~~------------ 68 (329)
T 1htr_B 13 AYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTS------------HSRFNPSESSTYSTNG------------ 68 (329)
T ss_dssp CEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT------------SCCBCGGGCTTCEEEE------------
T ss_pred EEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCC------------CCcCCCccCCCeEECC------------
Confidence 4567789999999999999999999999998 863 643 4699999999999866
Q ss_pred CCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCCC---
Q 010525 156 QNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS--- 232 (508)
Q Consensus 156 ~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~S--- 232 (508)
|.|.+.|++| ++.|.+++|+|+|++. ..+++.|||++.+++.++.....+||||||+..++
T Consensus 69 ------~~~~i~Yg~g--s~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 132 (329)
T 1htr_B 69 ------QTFSLQYGSG--SLTGFFGYDTLTVQSI--------QVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDE 132 (329)
T ss_dssp ------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTT
T ss_pred ------cEEEEEeCCC--CeEEEEEeeeEEEcce--------EECceEEEEEEEccccccccCCCceEEecCCCcccccC
Confidence 8999999996 5699999999999865 45789999999887754443456999999998654
Q ss_pred ---hHHHHHhcCCc-cceeEEeeecCC---CccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEECCeeec--
Q 010525 233 ---VPSLLAKAGLI-RNSFSMCFDKDD---SGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCIGSSCLK-- 299 (508)
Q Consensus 233 ---~~~qL~~~gli-~~~FSl~l~~~~---~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~-- 299 (508)
++++|+++|+| +++||+||++.. .|.|+||++|+.++ .|+|++. ..+|.|+|++|.||++.+.
T Consensus 133 ~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~ 208 (329)
T 1htr_B 133 ATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQ----ELYWQIGIEEFLIGGQASGWC 208 (329)
T ss_dssp CCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCS----SSSCEEEECEEEETTEECCTT
T ss_pred CCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCC----CceEEEEEeEEEECCceeeec
Confidence 68899999999 899999999864 69999999998753 5777742 3689999999999998764
Q ss_pred cCccceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEE
Q 010525 300 QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFV 379 (508)
Q Consensus 300 ~~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~ 379 (508)
.....+||||||++++||+++|++|.+++..... ........|+.. ..+|+|+|+| +|..++|++++|+
T Consensus 209 ~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~-----~~g~~~~~C~~~-----~~~P~i~f~f-~g~~~~i~~~~y~ 277 (329)
T 1htr_B 209 SEGCQAIVDTGTSLLTVPQQYMSALLQATGAQED-----EYGQFLVNCNSI-----QNLPSLTFII-NGVEFPLPPSSYI 277 (329)
T ss_dssp TTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC-----TTSCEEECGGGG-----GGSCCEEEEE-TTEEEEECHHHHE
T ss_pred CCCceEEEecCCccEECCHHHHHHHHHHhCCeec-----CCCeEEEeCCCc-----ccCCcEEEEE-CCEEEEECHHHhc
Confidence 3556899999999999999999999998754321 112233456653 4789999999 7889999999999
Q ss_pred EEeeccccEEEE-EEEecC-----CC-ceEEcceeeeeEEEEEeCCCCEEEEeeCC
Q 010525 380 IYGTQVVTGFCL-AIQPVD-----GD-IGTIGQNFMTGYRVVFDRENLKLGWSHSN 428 (508)
Q Consensus 380 ~~~~~~~~~~Cl-~i~~~~-----~~-~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 428 (508)
+... + .|+ +|+..+ ++ .||||+.|||++|+|||++++|||||+.+
T Consensus 278 ~~~~---g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 278 LSNN---G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EECS---S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccCC---C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 8764 3 787 687653 34 79999999999999999999999999863
No 17
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.7e-50 Score=411.34 Aligned_cols=297 Identities=21% Similarity=0.256 Sum_probs=239.3
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQN 157 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~ 157 (508)
.+...|..++|+|++.|++||||+++||+|. |..|.. .++.|||++|+||+.++
T Consensus 16 ~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-----------~~~~y~~~~SsT~~~~~-------------- 70 (329)
T 1oew_A 16 AYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-----------XQTIYTPSKSTTAKLLS-------------- 70 (329)
T ss_dssp CEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC------------CCCBCGGGCTTCEEEE--------------
T ss_pred EEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-----------ccCccCCccCccceecC--------------
Confidence 3566788899999999999999999999998 988742 24799999999999875
Q ss_pred CCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCCC-----
Q 010525 158 PKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS----- 232 (508)
Q Consensus 158 ~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~S----- 232 (508)
.|.|.+.|++| +.++|.+++|+|+|++. ..+++.|||++.+++.+......|||||||+..++
T Consensus 71 ---~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~ 138 (329)
T 1oew_A 71 ---GATWSISYGDG-SSSSGDVYTDTVSVGGL--------TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPT 138 (329)
T ss_dssp ---EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSS
T ss_pred ---CCeEEEEeCCC-CcEEEEEEEEEEEECCE--------EEeeeEEEEEEecCccccccCCCceEEEeccccccccCcC
Confidence 38999999995 66899999999999875 45789999999887655433356999999997544
Q ss_pred ----hHHHHHhcCCccceeEEeeecCCCccEEeccCCCCC----ceEeeeEEcCCCceeEEEEeeeEEECCeeeccCccc
Q 010525 233 ----VPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFK 304 (508)
Q Consensus 233 ----~~~qL~~~gli~~~FSl~l~~~~~G~i~fG~~d~~~----~~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~~~~~ 304 (508)
++++|+++ +-+++||+||.++..|.|+||++|+.+ +.|+|++.. ..+|.|+|++|.||++.+....+.
T Consensus 139 ~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~~~~~~ 214 (329)
T 1oew_A 139 QQKTFFDNAKAS-LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTK---QGFWEWTSTGYAVGSGTFKSTSID 214 (329)
T ss_dssp CCCCHHHHHTTT-SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCT---TSSCEEEEEEEEETTSCCEEEEEE
T ss_pred CCCCHHHHHHHh-ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCC---CceEEEEEeeEEECCeeccCCCce
Confidence 56888876 338999999998778999999999865 468888532 468999999999999887656678
Q ss_pred eEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEEEEeec
Q 010525 305 AIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQ 384 (508)
Q Consensus 305 aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~~~~~~ 384 (508)
+||||||++++||+++|++|.+++... ............|+ ..+|+|+|+| ||..++|++++|++....
T Consensus 215 aiiDSGTt~~~lP~~~~~~l~~~i~~a---~~~~~~g~~~~~C~-------~~~P~i~f~f-gg~~~~ip~~~~~~~~~~ 283 (329)
T 1oew_A 215 GIADTGTTLLYLPATVVSAYWAQVSGA---KSSSSVGGYVFPCS-------ATLPSFTFGV-GSARIVIPGDYIDFGPIS 283 (329)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTSTTC---EEETTTTEEEEETT-------CCCCCEEEEE-TTEEEEECHHHHEEEESS
T ss_pred EEEeCCCCCEECCHHHHHHHHHhCCCc---EEcCCCCEEEEECC-------CCCCcEEEEE-CCEEEEECHHHeeeeecC
Confidence 999999999999999999988775221 11111112224565 3689999999 789999999888876532
Q ss_pred cccEEEEE-EEecC-CCceEEcceeeeeEEEEEeC-CCCEEEEeeC
Q 010525 385 VVTGFCLA-IQPVD-GDIGTIGQNFMTGYRVVFDR-ENLKLGWSHS 427 (508)
Q Consensus 385 ~~~~~Cl~-i~~~~-~~~~IlG~~fl~~~yvVFD~-e~~rIGfa~~ 427 (508)
.....|++ |+..+ .+.||||+.|||++|+|||+ +++|||||+.
T Consensus 284 ~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 284 TGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp TTCSEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CCCCeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 12367886 66654 46899999999999999999 9999999974
No 18
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.3e-50 Score=411.26 Aligned_cols=291 Identities=20% Similarity=0.356 Sum_probs=237.8
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc-C--CCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-C--VRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSC 155 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C--~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C 155 (508)
.+...|..|+|+|++.|++||||+++||+|. | ..|.. ++.|||++|+||+...
T Consensus 15 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~------------~~~y~~~~SsT~~~~~------------ 70 (323)
T 3cms_A 15 QYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKN------------HQRFDPRKSSTFQNLG------------ 70 (323)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT------------SCCBCGGGCTTCEEEE------------
T ss_pred EEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccC------------CCCCCCccCCCeEECC------------
Confidence 3567788999999999999999999999998 8 45653 4699999999999876
Q ss_pred CCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCC----
Q 010525 156 QNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEI---- 231 (508)
Q Consensus 156 ~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~---- 231 (508)
|.|.+.|++| +++|.+++|+|+|++. ..+++.|||++.+.+..+.....+||||||+..+
T Consensus 71 ------~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 134 (323)
T 3cms_A 71 ------KPLSIHYGTG--SMQGILGYDTVTVSNI--------VDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEY 134 (323)
T ss_dssp ------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTT
T ss_pred ------cEEEEEeCCC--CeEEEEEEEEEEECCe--------EEeccEEEEEEecccccccccCCceEEecCcchhhccC
Confidence 8999999996 5899999999999875 4578999999988663222224699999999864
Q ss_pred --ChHHHHHhcCCc-cceeEEeeecC-CCccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEECCeeec-cCc
Q 010525 232 --SVPSLLAKAGLI-RNSFSMCFDKD-DSGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCIGSSCLK-QTS 302 (508)
Q Consensus 232 --S~~~qL~~~gli-~~~FSl~l~~~-~~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~-~~~ 302 (508)
+++++|+++|+| +++||+||+++ ..|.|+||++|+.++ .|+|++. ..+|.|+|++|.||++.+. ...
T Consensus 135 ~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~~ 210 (323)
T 3cms_A 135 SIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTV----QQYWQFTVDSVTISGVVVACEGG 210 (323)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTEEEESTTC
T ss_pred CCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECcc----CCeEEEEEeeEEECCEEeecCCC
Confidence 467899999999 89999999876 459999999998753 5777742 3689999999999998875 356
Q ss_pred cceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEEEEe
Q 010525 303 FKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYG 382 (508)
Q Consensus 303 ~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~~~~ 382 (508)
..+||||||++++||+++|++|.+++... ... .......|+ ....+|+|+|+| +|..++|++++|++.
T Consensus 211 ~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----~~~-~g~~~~~C~-----~~~~~P~i~f~f-~g~~~~i~~~~y~~~- 278 (323)
T 3cms_A 211 CQAILDTGTSKLVGPSSDILNIQQAIGAT----QNQ-YGEFDIDCD-----NLSYMPTVVFEI-NGKMYPLTPSAYTSQ- 278 (323)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHHHHTCE----EET-TTEEEECTT-----CTTTSCCEEEEE-TTEEEEECHHHHEEE-
T ss_pred cEEEEecCCccEeCCHHHHHHHHHHhCCe----ecC-CCcEEEECC-----CCccCceEEEEE-CCEEEEECHHHhccC-
Confidence 78999999999999999999999987432 111 112223454 345789999999 788999999999987
Q ss_pred eccccEEEE-EEEecC-CCceEEcceeeeeEEEEEeCCCCEEEEeeCC
Q 010525 383 TQVVTGFCL-AIQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 428 (508)
Q Consensus 383 ~~~~~~~Cl-~i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 428 (508)
. ...|+ +|+..+ .+.||||++|||++|+|||++++|||||+.+
T Consensus 279 ~---~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 279 D---QGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp E---TTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred C---CCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 2 45677 587763 4689999999999999999999999999863
No 19
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.1e-49 Score=416.25 Aligned_cols=320 Identities=19% Similarity=0.220 Sum_probs=254.7
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQN 157 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~ 157 (508)
.+...|..|+|+|+++|++||||+++||+|. | |. .++.|+|++|+||+...
T Consensus 29 ~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~------------~~~~y~~~~SsT~~~~~-------------- 80 (402)
T 3vf3_A 29 GYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF------------LHRYYQRQLSSTYRDLR-------------- 80 (402)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT------------CSCCCCGGGCTTCEEEE--------------
T ss_pred EEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Cc------------ccCCcCcccCcccccCC--------------
Confidence 3667889999999999999999999999998 6 42 23699999999999876
Q ss_pred CCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCC------
Q 010525 158 PKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEI------ 231 (508)
Q Consensus 158 ~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~------ 231 (508)
|.|.+.|++| +++|.+++|+|+|++... ....+.|+|+....+.|......|||||||+..+
T Consensus 81 ----~~~~i~Yg~G--s~~G~~~~D~v~ig~~~~------~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~ 148 (402)
T 3vf3_A 81 ----KGVYVPYTQG--KWEGELGTDLVSIPHGPN------VTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDS 148 (402)
T ss_dssp ----EEEEEECSSC--EEEEEEEEEEEECTTSCS------CEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTT
T ss_pred ----CEEEEEECcE--EEEEEEEEEEEEECCccc------cceeeeEEEEEccccccccCCCccceEEcCchhhcccCCc
Confidence 8999999996 579999999999985311 2224568888887776655456799999998754
Q ss_pred --ChHHHHHhcCCccceeEEeeec------------CCCccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEE
Q 010525 232 --SVPSLLAKAGLIRNSFSMCFDK------------DDSGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCI 293 (508)
Q Consensus 232 --S~~~qL~~~gli~~~FSl~l~~------------~~~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~V 293 (508)
+++++|+++++|.++||+||++ ...|.|+||++|+.++ .|+|++. ..+|.|++++|.|
T Consensus 149 ~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v 224 (402)
T 3vf3_A 149 LEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEI 224 (402)
T ss_dssp SCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSS----BTTBEECEEEEEE
T ss_pred CCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCc----CcEEEEEEeEEEE
Confidence 5678999999998899999963 2369999999998764 4777743 4689999999999
Q ss_pred CCeeecc-----CccceEEccCccceeccHHHHHHHHHHHHHhccCcccccc--ccccccccccccCCCCCCCeEEEEec
Q 010525 294 GSSCLKQ-----TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFE--GYPWKCCYKSSSQRLPKLPSVKLMFP 366 (508)
Q Consensus 294 g~~~~~~-----~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~--~~~~~~C~~~~~~~~~~~P~i~f~f~ 366 (508)
|++.+.. ....+||||||++++||+++|++|.++|.+.......... ......|+......+..+|+|+|+|.
T Consensus 225 ~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~ 304 (402)
T 3vf3_A 225 NGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLM 304 (402)
T ss_dssp TTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEE
T ss_pred CCEEecccccccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEe
Confidence 9998863 2457999999999999999999999999887542222111 12357898776555557999999997
Q ss_pred CCC-----eEEEcCCeEEEEeeccc--cEEEEE--EEecCCCceEEcceeeeeEEEEEeCCCCEEEEeeCCCCCCCCCCc
Q 010525 367 QNN-----SFVVNNPVFVIYGTQVV--TGFCLA--IQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTK 437 (508)
Q Consensus 367 g~~-----~~~i~~~~~~~~~~~~~--~~~Cl~--i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~~~~~~ 437 (508)
|+. .++|++++|++...... ...|++ +.+. .+.||||+.|||++|+|||++++|||||+.+|+..++.++
T Consensus 305 g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~i 383 (402)
T 3vf3_A 305 GEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRT 383 (402)
T ss_dssp CSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEE-SSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCBCSSCB
T ss_pred cCCCCceEEEEECHHHheehhccCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEecccCcccCccc
Confidence 654 58999999998764321 257885 4333 3679999999999999999999999999999999888888
Q ss_pred ccCCCC
Q 010525 438 SPLTPG 443 (508)
Q Consensus 438 ~p~~~~ 443 (508)
+++.+|
T Consensus 384 ~~i~gp 389 (402)
T 3vf3_A 384 AAVEGP 389 (402)
T ss_dssp CEEEEE
T ss_pred ccccCc
Confidence 888775
No 20
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=7.5e-50 Score=408.61 Aligned_cols=308 Identities=20% Similarity=0.340 Sum_probs=243.6
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc---CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD---CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSC 155 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~---C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C 155 (508)
.+...|..|+|+|++.|++||||+++||+|. |..|..+.. ...|..++.|||++|+|++.+.
T Consensus 13 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~---~~~C~~~~~y~~~~SsT~~~~~------------ 77 (342)
T 3pvk_A 13 TYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQT---ADFCKQKGTYDPSGSSASQDLN------------ 77 (342)
T ss_dssp SEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCC---TTGGGTTCCBCGGGCTTCEEEE------------
T ss_pred EEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccc---cCCCCCCCcCCCccCcceeecC------------
Confidence 4567788999999999999999999999974 665543211 0112346899999999999876
Q ss_pred CCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCC-----
Q 010525 156 QNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGE----- 230 (508)
Q Consensus 156 ~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~----- 230 (508)
|.|.+.|++| +.++|.+++|+|+|++. ...++.|||++... ..+||||||+..
T Consensus 78 ------~~~~i~Yg~g-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~ 135 (342)
T 3pvk_A 78 ------TPFKIGYGDG-SSSQGTLYKDTVGFGGV--------SIKNQVLADVDSTS-------IDQGILGVGYKTNEAGG 135 (342)
T ss_dssp ------EEEEEECSSS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES-------SSSCEEECSCGGGCSSC
T ss_pred ------CeEEEEecCC-CeEEEEEEEEEEEECCE--------EecceEEEEEEccC-------CCccEEEecCccccccc
Confidence 8999999995 67999999999999875 45789999998765 348999999986
Q ss_pred --CChHHHHHhcCCc-cceeEEeeecC--CCccEEeccCCCCC----ceEeeeEEcCCCceeEEEEeeeEEECCeeeccC
Q 010525 231 --ISVPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCCIGSSCLKQT 301 (508)
Q Consensus 231 --~S~~~qL~~~gli-~~~FSl~l~~~--~~G~i~fG~~d~~~----~~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~~ 301 (508)
.+++++|+++|+| +++||+||++. ..|.|+||++|+.+ +.|+|++. ..+|.|+|++|.||++.+...
T Consensus 136 ~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~~~ 211 (342)
T 3pvk_A 136 SYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTS----DRELRISLGSVEVSGKTINTD 211 (342)
T ss_dssp SSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC----SSSCEEEEEEEEETTEEEEEE
T ss_pred cCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCc----cceEEEEEeEEEECCEEecCC
Confidence 4689999999999 79999999874 46999999999875 45888853 258999999999999998855
Q ss_pred ccceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEEEE
Q 010525 302 SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIY 381 (508)
Q Consensus 302 ~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~~~ 381 (508)
...+||||||++++||+++|++|.+++........ .. ..+|..+|. ..|.|+|+|.+|..+++++++|+++
T Consensus 212 ~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~---~~---~~~~~~~C~---~~p~i~f~f~~g~~~~vp~~~~~~~ 282 (342)
T 3pvk_A 212 NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDS---NG---NSFYEVDCN---LSGDVVFNFSKNAKISVPASEFAAS 282 (342)
T ss_dssp EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECT---TS---CEEEEECSC---CCSEEEEEESTTCEEEEEGGGGEEC
T ss_pred CceEEEeCCCCCeecCHHHHHHHHHHcCCeecccC---CC---ceEEEEecC---CCCceEEEECCCCEEEEcHHHheee
Confidence 57899999999999999999999998754332111 00 112334443 3599999997688999999999886
Q ss_pred eec--c-ccEEEE-EEEecCCCceEEcceeeeeEEEEEeCCCCEEEEeeCCCCCCCCCCcccC
Q 010525 382 GTQ--V-VTGFCL-AIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPL 440 (508)
Q Consensus 382 ~~~--~-~~~~Cl-~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~~~~~~~p~ 440 (508)
... + ....|+ ++.+. +.||||+.|||++|+|||++++|||||+.+|+.. .+++++
T Consensus 283 ~~~~~g~~~~~C~~~i~~~--~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~--s~iv~i 341 (342)
T 3pvk_A 283 LQGDDGQPYDKCQLLFDVN--DANILGDNFLRSAYIVYDLDDNEISLAQVKYTSA--SSISAL 341 (342)
T ss_dssp ----------CEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSC--CCEEEC
T ss_pred ccccCCCcCCeeEEEEeeC--CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCC--CCEEEe
Confidence 321 1 125686 46653 5799999999999999999999999999999843 455665
No 21
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.1e-49 Score=413.41 Aligned_cols=314 Identities=19% Similarity=0.353 Sum_probs=235.2
Q ss_pred CceeeeecCCCceeEeccccCCceeEEecc-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCC-----CC
Q 010525 80 QFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDL-----GT 153 (508)
Q Consensus 80 ~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~-----~~ 153 (508)
+...|..|+| |++||||+++||+|. | .+|+.++|+++.|.. ..
T Consensus 16 Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~--------------------------~~~~~~~C~s~~C~~~~~~~~~ 64 (381)
T 1t6e_X 16 YTIPFHDGAS-----LVLDVAGPLVWSTCDGG--------------------------QPPAEIPCSSPTCLLANAYPAP 64 (381)
T ss_dssp EEEEEETTEE-----EEEETTCCCEEECCCTT--------------------------CCCCCCBTTSHHHHHHHSSCCT
T ss_pred EEEEEeCCCE-----EEEECCCCceEEeCCCC--------------------------CCCCccCCCCchhccccCCCCC
Confidence 4455555554 889999999999986 3 124455566555542 12
Q ss_pred CCCCC-------CCCC-CeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEe
Q 010525 154 SCQNP-------KQPC-PYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIG 225 (508)
Q Consensus 154 ~C~~~-------~~~c-~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlG 225 (508)
.|... +..| .|.++|+|| +.++|.+++|+|+|++..+.........++.|||++.+.+..+ ....|||||
T Consensus 65 sc~~~~~~~~~~~~~c~~f~i~YgdG-s~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlG 142 (381)
T 1t6e_X 65 GCPAPSCGSDKHDKPCTAYPYNPVSG-ACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAG 142 (381)
T ss_dssp TCCCCCC------CBCEECCBCTTTC-CBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEE
T ss_pred CCCCccCCcCcCCCccccccccccCC-ceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEE
Confidence 34431 2347 599999995 6679999999999986422110001111247899988632111 135699999
Q ss_pred cCCCCCChHHHHHhcCCccceeEEeeecCCCccEEeccCCCC------CceEeeeEEcCCCceeEEEEeeeEEECCeeec
Q 010525 226 LGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPA------TQQSTSFLASNGKYITYIIGVETCCIGSSCLK 299 (508)
Q Consensus 226 Lg~~~~S~~~qL~~~gli~~~FSl~l~~~~~G~i~fG~~d~~------~~~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~ 299 (508)
||++.+|++.||+++|+++++||+||.++..|.|+||+.+.. .+.|+|++..+.. .+|.|+|++|.||++.+.
T Consensus 143 Lg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~-~~y~v~l~~i~vg~~~~~ 221 (381)
T 1t6e_X 143 LANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGS-PAHYISARSIVVGDTRVP 221 (381)
T ss_dssp CSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTC-CSCEECEEEEEETTEECC
T ss_pred eCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCC-cceEEEEEEEEEcCEEec
Confidence 999999999999999877999999999877899999998753 3579999765432 467799999999999886
Q ss_pred c--Cc---cceEEccCccceeccHHHHHHHHHHHHHhccC--------ccccccccccccccccccCC----CCCCCeEE
Q 010525 300 Q--TS---FKAIVDSGSSFTFLPKEVYETIAAEFDRQVND--------TITSFEGYPWKCCYKSSSQR----LPKLPSVK 362 (508)
Q Consensus 300 ~--~~---~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~--------~~~~~~~~~~~~C~~~~~~~----~~~~P~i~ 362 (508)
. .. .++||||||++++||+++|++|.++|.+++.. .+.......+..||..++.. ...+|+|+
T Consensus 222 ~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~ 301 (381)
T 1t6e_X 222 VPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQ 301 (381)
T ss_dssp CCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEE
T ss_pred CCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCCeEE
Confidence 2 22 35999999999999999999999999887641 11101224568899876532 13689999
Q ss_pred EEecCCCeEEEcCCeEEEEeeccccEEEEEEEecCC--------CceEEcceeeeeEEEEEeCCCCEEEEeeCCC
Q 010525 363 LMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDG--------DIGTIGQNFMTGYRVVFDRENLKLGWSHSNC 429 (508)
Q Consensus 363 f~f~g~~~~~i~~~~~~~~~~~~~~~~Cl~i~~~~~--------~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C 429 (508)
|+|.|+..++|++++|++.... +.+|++|+..+. +.||||+.|||++|+|||++|+|||||+...
T Consensus 302 f~f~gg~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 302 LGLDGGSDWTMTGKNSMVDVKQ--GTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp EEETTSCEEEECHHHHEEEEET--TEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCT
T ss_pred EEECCCcEEEeCCCeEEEEcCC--CeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEecccC
Confidence 9997779999999999987543 679999988653 5799999999999999999999999999864
No 22
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=5.8e-50 Score=405.81 Aligned_cols=291 Identities=22% Similarity=0.379 Sum_probs=240.1
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc-CCC--CCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CVR--CAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSC 155 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~~--C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C 155 (508)
.+...|..|+|+|+++|++||||+++||+|. |.. |. .++.|||++|+|++...
T Consensus 12 ~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~------------~~~~y~~~~SsT~~~~~------------ 67 (320)
T 4aa9_A 12 QYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCK------------NHHRFDPRKSSTFRNLG------------ 67 (320)
T ss_dssp CCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHH------------TSCCBCGGGCTTCEEEE------------
T ss_pred EEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccC------------CCCCCCCCCCcCeEcCC------------
Confidence 4677899999999999999999999999998 873 53 24799999999999876
Q ss_pred CCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCC----
Q 010525 156 QNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEI---- 231 (508)
Q Consensus 156 ~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~---- 231 (508)
|.|.+.|++| +++|.+++|+|+|++. ..+++.|||++...+..+.....+||||||+..+
T Consensus 68 ------~~~~i~Yg~g--s~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 131 (320)
T 4aa9_A 68 ------KPLSIHYGTG--SMEGFLGYDTVTVSNI--------VDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEY 131 (320)
T ss_dssp ------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTT
T ss_pred ------cEEEEEECCc--EEEEEEEEEEEEECCE--------eecCeEEEEEEEcccccccccCcccEEecCcccccccC
Confidence 8999999996 5899999999999876 4578999999988774333345699999998754
Q ss_pred --ChHHHHHhcCCc-cceeEEeeecC-CCccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEECCeeecc-Cc
Q 010525 232 --SVPSLLAKAGLI-RNSFSMCFDKD-DSGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCIGSSCLKQ-TS 302 (508)
Q Consensus 232 --S~~~qL~~~gli-~~~FSl~l~~~-~~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~-~~ 302 (508)
+++++|+++|+| +++||+||+++ ..|.|+||++|+.++ .|+|++. ..+|.|++++|.||++.+.. ..
T Consensus 132 ~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~~~~~ 207 (320)
T 4aa9_A 132 SVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTL----QQYWQFTVDSVTINGVAVACVGG 207 (320)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSS----BTTBEEEECEEEETTEEEESTTC
T ss_pred CCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEccc----CCceEEEEeEEEECCEEeccCCC
Confidence 478899999999 89999999985 689999999998764 4777742 47899999999999988763 45
Q ss_pred cceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEEEEe
Q 010525 303 FKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYG 382 (508)
Q Consensus 303 ~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~~~~ 382 (508)
..+||||||++++||+++|++|.+++.... . ........|+. ...+|+|+|+| +|..++|++++|+...
T Consensus 208 ~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~----~-~~g~~~~~C~~-----~~~~p~i~f~f-~g~~~~l~~~~y~~~~ 276 (320)
T 4aa9_A 208 CQAILDTGTSVLFGPSSDILKIQMAIGATE----N-RYGEFDVNCGN-----LRSMPTVVFEI-NGRDYPLSPSAYTSKD 276 (320)
T ss_dssp EEEEECTTCSSEEEEHHHHHHHHHHTTCEE----C-TTSCEEECGGG-----GGGCCCEEEEE-TTEEEEECHHHHEEEE
T ss_pred cEEEEECCCCcEECCHHHHHHHHHHhCCcc----c-CCCcEEEeCCC-----CCcCceEEEEE-CCEEEEECHHHhccCC
Confidence 689999999999999999999998864321 1 11122334543 35789999999 6889999999998763
Q ss_pred eccccEEEE-EEEecC-CCceEEcceeeeeEEEEEeCCCCEEEEeeCC
Q 010525 383 TQVVTGFCL-AIQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 428 (508)
Q Consensus 383 ~~~~~~~Cl-~i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 428 (508)
...|+ +|+... ++.||||++|||++|+|||++++|||||+++
T Consensus 277 ----~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 277 ----QGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp ----TTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ----CCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 45687 577754 3579999999999999999999999999864
No 23
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=5.5e-50 Score=421.94 Aligned_cols=289 Identities=19% Similarity=0.296 Sum_probs=236.7
Q ss_pred CceeeeecCCCceeEeccccCCceeEEecc-CC--CCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCCC
Q 010525 80 QFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CV--RCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQ 156 (508)
Q Consensus 80 ~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~--~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~ 156 (508)
+...|..|+|+|++.|++||||+++||+|. |. .|.. ++.|||++|+||+...
T Consensus 140 Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~------------~~~ydps~SsT~~~~~------------- 194 (453)
T 2bju_A 140 FYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLT------------KHLYDSSKSRTYEKDG------------- 194 (453)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGG------------SCCBCGGGCTTCEEEE-------------
T ss_pred EEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCC------------CCcCCCccCCceeECC-------------
Confidence 566788899999999999999999999998 86 4643 4799999999999866
Q ss_pred CCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEecc--CCCCCCCCCCeEEecCCCCC---
Q 010525 157 NPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQS--GGYLDGVAPDGLIGLGLGEI--- 231 (508)
Q Consensus 157 ~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~s--g~~~~~~~~dGIlGLg~~~~--- 231 (508)
|.|.+.|++| +++|.+++|+|+|++. ..+ +.|||++.++ |.++.....|||||||++.+
T Consensus 195 -----~~~~i~YgdG--s~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~ 258 (453)
T 2bju_A 195 -----TKVEMNYVSG--TVSGFFSKDLVTVGNL--------SLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIG 258 (453)
T ss_dssp -----EEEEEECSSS--EEEEEEEEEEEEETTE--------EEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTT
T ss_pred -----cEEEEEcCCC--CeEEEEEEEEEEEeCc--------EEE-EEEEEEEEecccCccccccCCceeEeccCCccccc
Confidence 8999999996 4899999999999875 345 9999999987 64333335699999999754
Q ss_pred ---ChHHHHHhcCCc-cceeEEeeecC--CCccEEeccCCCCC----ceEeeeEEcCCCceeEEEEeeeEEECCeeeccC
Q 010525 232 ---SVPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCCIGSSCLKQT 301 (508)
Q Consensus 232 ---S~~~qL~~~gli-~~~FSl~l~~~--~~G~i~fG~~d~~~----~~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~~ 301 (508)
+++++|+++|+| +++||+||+++ ..|.|+||++|+.+ +.|+|++. ..+|.|.++ |.||++. . .
T Consensus 259 ~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~----~~~w~V~l~-I~Vgg~~-~-~ 331 (453)
T 2bju_A 259 SVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNH----DLYWQITLD-AHVGNIM-L-E 331 (453)
T ss_dssp CCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEE----ETTEEEEEE-EEETTEE-E-E
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCC----CceEEEEEE-EEECcEE-e-c
Confidence 467899999999 89999999985 57999999999865 45888864 368999999 9999943 3 5
Q ss_pred ccceEEccCccceeccHHHHHHHHHHHHHhccCccccccc-cccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEEE
Q 010525 302 SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEG-YPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVI 380 (508)
Q Consensus 302 ~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~-~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~~ 380 (508)
...+||||||++++||+++|++|.+++.. ... ..+ .+...|+. ..+|+|+|+| ||..++|++++|++
T Consensus 332 ~~~aIiDSGTsl~~lP~~~~~~l~~~i~~----~~~-~~g~~~~v~C~~------~~~P~itf~f-gg~~~~l~~~~yi~ 399 (453)
T 2bju_A 332 KANCIVDSGTSAITVPTDFLNKMLQNLDV----IKV-PFLPFYVTLCNN------SKLPTFEFTS-ENGKYTLEPEYYLQ 399 (453)
T ss_dssp EEEEEECTTCCSEEECHHHHHHHTTTSSC----EEC-TTSSCEEEETTC------TTCCCEEEEC-SSCEEEECHHHHEE
T ss_pred cccEEEcCCCCeEecCHHHHHHHHHHhCC----ccc-CCCceEEEecCC------CCCCcEEEEE-CCEEEEECHHHhEe
Confidence 66899999999999999999998877543 211 111 23345553 4789999999 78999999999998
Q ss_pred EeeccccEEEE-EEEecC--CCceEEcceeeeeEEEEEeCCCCEEEEeeCC
Q 010525 381 YGTQVVTGFCL-AIQPVD--GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 428 (508)
Q Consensus 381 ~~~~~~~~~Cl-~i~~~~--~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 428 (508)
.........|+ +|++.+ .+.||||++|||++|+|||++++|||||+.+
T Consensus 400 ~~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 400 HIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp ECTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred ecccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 76431245787 688765 3589999999999999999999999999874
No 24
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.7e-49 Score=421.21 Aligned_cols=319 Identities=19% Similarity=0.221 Sum_probs=256.5
Q ss_pred CceeeeecCCCceeEeccccCCceeEEecc-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCC
Q 010525 80 QFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNP 158 (508)
Q Consensus 80 ~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~~ 158 (508)
+...|.+|+|+|+++|++||||+++||+|. | |.. ++.|||++|+||+...
T Consensus 76 Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~------------~~~y~~~~SsT~~~~~--------------- 126 (455)
T 3lpj_A 76 YYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL------------HRYYQRQLSSTYRDLR--------------- 126 (455)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC------------SCCCCGGGCTTCEEEE---------------
T ss_pred EEEEEEECCCCeEEEEEEcCCCcceEEecccc--ccc------------CCcccCCCCCCcccCC---------------
Confidence 566788999999999999999999999998 6 432 3699999999999876
Q ss_pred CCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCC-------
Q 010525 159 KQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEI------- 231 (508)
Q Consensus 159 ~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~------- 231 (508)
|.|.+.|++| ++.|.+++|+|+|++... +...+.|+|+....+.|......|||||||+..+
T Consensus 127 ---~~~~i~Yg~G--s~~G~~~~Dtv~ig~~~~------~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~ 195 (455)
T 3lpj_A 127 ---KGVYVPYTQG--KWEGELGTDLVSIPHGPN------VTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSL 195 (455)
T ss_dssp ---EEEEEECSSC--EEEEEEEEEEEECTTSCS------CEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTS
T ss_pred ---ccEEEEeCCe--EEEEEEEEEEEEECCCcc------eeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCC
Confidence 8999999997 569999999999985311 2234679999888776655556799999998754
Q ss_pred -ChHHHHHhcCCccceeEEeeec------------CCCccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEEC
Q 010525 232 -SVPSLLAKAGLIRNSFSMCFDK------------DDSGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCIG 294 (508)
Q Consensus 232 -S~~~qL~~~gli~~~FSl~l~~------------~~~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~Vg 294 (508)
+++++|+++++|.++||+||++ ...|.|+||++|+.++ .|+|+.. ..+|.|.+++|.||
T Consensus 196 ~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~ 271 (455)
T 3lpj_A 196 EPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEIN 271 (455)
T ss_dssp CCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCEEEEEET
T ss_pred CcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCC----CceeEEEEeEEEEC
Confidence 4678999999998899999963 3579999999998764 4777743 47899999999999
Q ss_pred Ceeecc-----CccceEEccCccceeccHHHHHHHHHHHHHhccCcccccc--ccccccccccccCCCCCCCeEEEEecC
Q 010525 295 SSCLKQ-----TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFE--GYPWKCCYKSSSQRLPKLPSVKLMFPQ 367 (508)
Q Consensus 295 ~~~~~~-----~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~--~~~~~~C~~~~~~~~~~~P~i~f~f~g 367 (508)
++.+.. ....+||||||++++||+++|++|.++|............ ......|+......+..+|+|+|+|.|
T Consensus 272 g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g 351 (455)
T 3lpj_A 272 GQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMG 351 (455)
T ss_dssp TEECCCCGGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEEC
T ss_pred CEEccccccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEEEEEcC
Confidence 998863 1457999999999999999999999999887543222111 123578988765555579999999976
Q ss_pred CC-----eEEEcCCeEEEEeeccc--cEEEEEE--EecCCCceEEcceeeeeEEEEEeCCCCEEEEeeCCCCCCCCCCcc
Q 010525 368 NN-----SFVVNNPVFVIYGTQVV--TGFCLAI--QPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKS 438 (508)
Q Consensus 368 ~~-----~~~i~~~~~~~~~~~~~--~~~Cl~i--~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~~~~~~~ 438 (508)
+. +++|++++|++...... ...|+++ .+. .+.||||+.|||++|+|||++++|||||+.+|...++.+++
T Consensus 352 ~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~i~ 430 (455)
T 3lpj_A 352 EVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTA 430 (455)
T ss_dssp SSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSSCCC
T ss_pred CCcCceEEEEECHHHheEeccCCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEecccccccccCcc
Confidence 54 58899999998765321 2478863 333 36799999999999999999999999999999998877788
Q ss_pred cCCCC
Q 010525 439 PLTPG 443 (508)
Q Consensus 439 p~~~~ 443 (508)
++.++
T Consensus 431 ~i~g~ 435 (455)
T 3lpj_A 431 AVEGP 435 (455)
T ss_dssp EEEEE
T ss_pred eecCC
Confidence 88775
No 25
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=2.6e-50 Score=411.84 Aligned_cols=292 Identities=21% Similarity=0.382 Sum_probs=239.5
Q ss_pred CceeeeecCCCceeEeccccCCceeEEecc-CC----CCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCC
Q 010525 80 QFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CV----RCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTS 154 (508)
Q Consensus 80 ~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~----~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~ 154 (508)
+...|..|+|+|++.|++||||+++||+|. |. .|. .++.|||++|+|++...
T Consensus 20 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~------------~~~~y~~~~SsT~~~~~----------- 76 (341)
T 3k1w_A 20 YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACV------------YHKLFDASDSSSYKHNG----------- 76 (341)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHH------------TSCCBCGGGCTTCEEEE-----------
T ss_pred EEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCccc------------CCCCCCCCcCcCeeECC-----------
Confidence 567788999999999999999999999998 87 353 34799999999999765
Q ss_pred CCCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCCC--
Q 010525 155 CQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS-- 232 (508)
Q Consensus 155 C~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~S-- 232 (508)
|.|.+.|++| +++|.+++|+|+|++. .. ++.|||++..++..+.....+||||||+..++
T Consensus 77 -------~~~~i~Yg~g--s~~G~~~~D~v~ig~~--------~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 138 (341)
T 3k1w_A 77 -------TELTLRYSTG--TVSGFLSQDIITVGGI--------TV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIG 138 (341)
T ss_dssp -------EEEEEEETTE--EEEEEEEEEEEEETTE--------EE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGG
T ss_pred -------CEEEEEECCc--EEEEEEEEEEEEECCc--------ee-eEEEEEEEEccccccccCCcceEEECCchhhccc
Confidence 8999999996 5899999999999876 44 89999999887652233356999999998664
Q ss_pred ----hHHHHHhcCCc-cceeEEeeecCC------CccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEECCee
Q 010525 233 ----VPSLLAKAGLI-RNSFSMCFDKDD------SGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCIGSSC 297 (508)
Q Consensus 233 ----~~~qL~~~gli-~~~FSl~l~~~~------~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~Vg~~~ 297 (508)
++++|+++|+| +++||+||+++. .|.|+||++|+.++ .|+|+.. ..+|.|.+++|.||++.
T Consensus 139 ~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~ 214 (341)
T 3k1w_A 139 RVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKGVSVGSST 214 (341)
T ss_dssp GCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSS----TTSCEEEECCEEETTEE
T ss_pred CCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCC----CCEEEEEEeEEEECCEE
Confidence 68999999999 899999998764 79999999998764 4777742 47899999999999986
Q ss_pred ec-cCccceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCC
Q 010525 298 LK-QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNP 376 (508)
Q Consensus 298 ~~-~~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~ 376 (508)
+. .....+||||||++++||+++|++|.+++.... .. .+ |..+|.....+|+|+|+| +|..++|+++
T Consensus 215 ~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~----~~-~g------~~~~C~~~~~~p~i~f~f-~g~~~~l~~~ 282 (341)
T 3k1w_A 215 LLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKK----RL-FD------YVVKCNEGPTLPDISFHL-GGKEYTLTSA 282 (341)
T ss_dssp EECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE----CS-SC------EEEEGGGGGGCCCEEEEE-TTEEEEECHH
T ss_pred eecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCee----cC-CC------eEEeCCCCCcCCcEEEEE-CCEEEEECHH
Confidence 53 456789999999999999999999999875432 11 11 333443335789999999 6889999999
Q ss_pred eEEEEeeccccEEEE-EEEec-----CCCceEEcceeeeeEEEEEeCCCCEEEEeeCC
Q 010525 377 VFVIYGTQVVTGFCL-AIQPV-----DGDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 428 (508)
Q Consensus 377 ~~~~~~~~~~~~~Cl-~i~~~-----~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 428 (508)
+|++.........|+ +|+.. ..+.||||++|||++|+|||+|++|||||+++
T Consensus 283 ~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 283 DYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp HHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 998775433356788 57763 24679999999999999999999999999975
No 26
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=2.9e-49 Score=401.62 Aligned_cols=293 Identities=20% Similarity=0.284 Sum_probs=233.6
Q ss_pred CceeeeecCCCceeEeccccCCceeEEecc-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCC
Q 010525 80 QFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNP 158 (508)
Q Consensus 80 ~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~~ 158 (508)
+...|..+ +|++.|++||||+++||+|. |..|..+ .++.|||++|+ ++.
T Consensus 16 Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~----------~~~~y~~~~Ss-~~~----------------- 65 (325)
T 1ibq_A 16 YLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQT----------GHDLYTPSSSA-TKL----------------- 65 (325)
T ss_dssp EEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHT----------TSCCCBCCSSC-EEC-----------------
T ss_pred EEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccC----------CCCCCCchhcC-Ccc-----------------
Confidence 44556666 99999999999999999998 9876422 35799999998 542
Q ss_pred CCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCCC------
Q 010525 159 KQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS------ 232 (508)
Q Consensus 159 ~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~S------ 232 (508)
+.|.|.++|++| +.++|.+++|+|+|++. ...++.|||++.+++.+......|||||||+..++
T Consensus 66 -~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~ 135 (325)
T 1ibq_A 66 -SGYSWDISYGDG-SSASGDVYRDTVTVGGV--------TTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKA 135 (325)
T ss_dssp -TTCBEEEECSSS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSC
T ss_pred -CCCEEEEEeCCC-CEEEEEEEEeEEEECCE--------EEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCC
Confidence 248999999995 66999999999999875 45789999999987765543456999999997654
Q ss_pred ---hHHHHHhcCCccceeEEeeecCCCccEEeccCCCCC----ceEeeeEEcCCCceeEEEEeeeEEECCeeeccCccce
Q 010525 233 ---VPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKA 305 (508)
Q Consensus 233 ---~~~qL~~~gli~~~FSl~l~~~~~G~i~fG~~d~~~----~~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~~~~~a 305 (508)
++++|+++ +.+++||+||.++..|.|+||++|+.+ +.|+|++. ...+|.|+|++|.||++.+......+
T Consensus 136 ~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~w~v~l~~i~v~~~~~~~~~~~a 211 (325)
T 1ibq_A 136 QTTFFDTVKSQ-LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADS---SQGYWGFSTDGYSIGDGSSSSSGFSA 211 (325)
T ss_dssp CCCHHHHHGGG-SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBC---TTSSCEEEECEEEETTSCCBSCCEEE
T ss_pred CCCHHHHHHHh-cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCC---CCceEEEEECcEEECCeeccCCCceE
Confidence 56899886 338999999998778999999999864 46888853 24689999999999998887567789
Q ss_pred EEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEEEEeecc
Q 010525 306 IVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQV 385 (508)
Q Consensus 306 iiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~~~~~~~ 385 (508)
||||||++++||+++|++|.++|... ............|+ ..+|+|+|+| ||..++|++++|++.....
T Consensus 212 iiDSGTt~~~lP~~~~~~i~~~i~~a---~~~~~~g~~~~~C~-------~~~P~i~f~f-gg~~~~i~~~~~~~~~~~~ 280 (325)
T 1ibq_A 212 IADTGTTLILLDDEIVSAYYEQVSGA---QESYEAGGYVFSCS-------TDLPDFTVVI-GDYKAVVPGKYINYAPVST 280 (325)
T ss_dssp EECTTCCSEEECHHHHHHHHTTSTTC---BCCSSSSSCEEETT-------CCCCCEEEEE-TTEEEEECHHHHEEEESST
T ss_pred EEeCCCCcEeCCHHHHHHHHHhCCCc---eEcCcCCeEEEEcC-------CCCCcEEEEE-CCEEEEECHHHhcccccCC
Confidence 99999999999999999988875321 11111112223465 3689999999 7889999998888765321
Q ss_pred ccEEEEE-EEecC-CCceEEcceeeeeEEEEEeCCCCEEEEeeC
Q 010525 386 VTGFCLA-IQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHS 427 (508)
Q Consensus 386 ~~~~Cl~-i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 427 (508)
....|++ |+..+ .+.||||++|||++|+|||++++|||||+.
T Consensus 281 ~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 324 (325)
T 1ibq_A 281 GSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQ 324 (325)
T ss_dssp TCSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred CCCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeC
Confidence 2367886 76654 468999999999999999999999999986
No 27
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.9e-49 Score=403.81 Aligned_cols=291 Identities=18% Similarity=0.225 Sum_probs=234.2
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc-CC--CCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CV--RCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSC 155 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~--~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C 155 (508)
.+...|..+ +|++.|++||||+++||+|. |. .|... .++.|||++| ||+...
T Consensus 18 ~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~----------~~~~y~~~~S-T~~~~~------------ 72 (330)
T 1yg9_A 18 QYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCP----------NLQKYEKLKP-KYISDG------------ 72 (330)
T ss_dssp TSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGST----------TCCCCCCSSC-EEEEEE------------
T ss_pred EEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCccc----------ccCccCCCCC-ceEECC------------
Confidence 345566666 99999999999999999998 86 57311 2479999999 999765
Q ss_pred CCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCCC---
Q 010525 156 QNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS--- 232 (508)
Q Consensus 156 ~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~S--- 232 (508)
+.|.+.|++| +++|.+++|+|+|++. ...++.|||++.+...| .....+||||||+..++
T Consensus 73 ------~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~~~~~~fg~~~~~~~~f-~~~~~~GilGLg~~~~s~~~ 135 (330)
T 1yg9_A 73 ------NVQVKFFDTG--SAVGRGIEDSLTISQL--------TTSQQDIVLADELSQEV-CILSADVVVGIAAPGCPNAL 135 (330)
T ss_dssp ------EEEEEETTTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEECTHH-HHTTCSEEEECSCTTSCCTT
T ss_pred ------CEEEEEECCc--eEEEEEEEEEEEECCE--------EEcCeEEEEEEEccccc-ccccCceEEEcCcchhcccc
Confidence 8899999996 5699999999999875 45789999999873323 22356999999998776
Q ss_pred ----hHHHHHhcCCccceeEEeeecC--C--CccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEECCeeecc
Q 010525 233 ----VPSLLAKAGLIRNSFSMCFDKD--D--SGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCIGSSCLKQ 300 (508)
Q Consensus 233 ----~~~qL~~~gli~~~FSl~l~~~--~--~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~ 300 (508)
++++|+++|+|+++||+||++. . .|.|+||++|+.++ .|+|+. ...+|.|+|++|.||++.+..
T Consensus 136 ~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~----~~~~w~v~l~~i~v~~~~~~~ 211 (330)
T 1yg9_A 136 KGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLV----GDDSWKFRLDGVKIGDTTVAP 211 (330)
T ss_dssp SCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBS----CTTSCCEECSEEEETTEEEEC
T ss_pred CCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECC----CCCEEEEEeCeEEECCEEEcC
Confidence 7899999998899999999876 2 69999999998754 477774 246899999999999988765
Q ss_pred CccceEEccCccceeccHHHHHHHHHHHHHhccCcccccccccccccc-ccccCCCCCCCeEEEEecCCCeEEEcCCeEE
Q 010525 301 TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCY-KSSSQRLPKLPSVKLMFPQNNSFVVNNPVFV 379 (508)
Q Consensus 301 ~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~-~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~ 379 (508)
....+||||||++++||+++|++|.+++.... .. .+ .. .| ..+|.....+|+|+|+| ||..++|++++|+
T Consensus 212 ~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~----~~-~g-~~--~~~~~~C~~~~~~p~i~f~f-gg~~~~l~~~~y~ 282 (330)
T 1yg9_A 212 AGTQAIIDTSKAIIVGPKAYVNPINEAIGCVV----EK-TT-TR--RICKLDCSKIPSLPDVTFVI-NGRNFNISSQYYI 282 (330)
T ss_dssp TTCEEEECTTCSSEEEEHHHHHHHHHHHTCEE----EE-CS-SC--EEEEECGGGGGGSCCEEEEE-TTEEEEECHHHHE
T ss_pred CCcEEEEecCCccccCCHHHHHHHHHHhCCcc----cC-CC-ce--EEEEEECCCccccCcEEEEE-CCEEEEECHHHhc
Confidence 66789999999999999999999999874431 11 11 00 12 33343335789999999 7899999999999
Q ss_pred EEeeccccEEEE-EEEecC-CCceEEcceeeeeEEEEEeCCCCEEEEeeCC
Q 010525 380 IYGTQVVTGFCL-AIQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 428 (508)
Q Consensus 380 ~~~~~~~~~~Cl-~i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 428 (508)
+.. +..|+ +|++.+ .+.||||+.|||++|+|||++|+|||||+.+
T Consensus 283 ~~~----~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 283 QQN----GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EEE----TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccC----CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 876 34677 677643 4679999999999999999999999999863
No 28
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=2.8e-49 Score=409.13 Aligned_cols=288 Identities=20% Similarity=0.315 Sum_probs=236.5
Q ss_pred CceeeeecCCCceeEeccccCCceeEEecc-CC--CCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCCC
Q 010525 80 QFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CV--RCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQ 156 (508)
Q Consensus 80 ~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~--~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~ 156 (508)
+...|..|+|+|++.|++||||+++||+|. |. .|.. ++.|||++|+||+...
T Consensus 64 Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~------------~~~y~~~~SsT~~~~~------------- 118 (375)
T 1miq_A 64 FYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSI------------KNLYDSSKSKSYEKDG------------- 118 (375)
T ss_dssp EECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGG------------SCCBCGGGCTTCEEEE-------------
T ss_pred EEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccC------------CCcCCCccCCceEECC-------------
Confidence 345677888999999999999999999998 86 4643 4799999999999865
Q ss_pred CCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEe----ccCCCCCCCCCCeEEecCCCCCC
Q 010525 157 NPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMK----QSGGYLDGVAPDGLIGLGLGEIS 232 (508)
Q Consensus 157 ~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~----~sg~~~~~~~~dGIlGLg~~~~S 232 (508)
|.|.+.|++| +++|.+++|+|+|++. ...+ .|||++. ++ .|. ....|||||||+..++
T Consensus 119 -----~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~-~Fg~~~~~~~~~~-~f~-~~~~dGilGLg~~~~s 180 (375)
T 1miq_A 119 -----TKVDITYGSG--TVKGFFSKDLVTLGHL--------SMPY-KFIEVTDTDDLEP-IYS-SVEFDGILGLGWKDLS 180 (375)
T ss_dssp -----EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEE-EEEEEEECGGGTT-HHH-HSCCCEEEECSSCCTT
T ss_pred -----cEEEEEeCCC--eEEEEEEEEEEEEcCc--------eECc-EEEEEEecccccc-ccc-cCCCceEEeCCCCccc
Confidence 8999999996 4899999999999875 3467 9999998 54 331 2246999999998654
Q ss_pred ------hHHHHHhcCCc-cceeEEeeecC--CCccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEECCeeec
Q 010525 233 ------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCIGSSCLK 299 (508)
Q Consensus 233 ------~~~qL~~~gli-~~~FSl~l~~~--~~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~ 299 (508)
++++|+++|+| +++||+||+++ ..|.|+||++|+.++ .|+|++. ..+|.|.++ |.||++.+
T Consensus 181 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~-i~v~g~~~- 254 (375)
T 1miq_A 181 IGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNH----DLYWQIDLD-VHFGKQTM- 254 (375)
T ss_dssp CSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSS----SSSSEEEEE-EEETTEEE-
T ss_pred ccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCC----CceEEEEEE-EEECCEEc-
Confidence 67899999999 89999999986 379999999998653 5788742 468999999 99999988
Q ss_pred cCccceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEE
Q 010525 300 QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFV 379 (508)
Q Consensus 300 ~~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~ 379 (508)
....+||||||++++||+++|++|.+++..... ...+.....|+. ..+|+|+|+| ||..++|++++|+
T Consensus 255 -~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~----~~~g~~~~~C~~------~~~P~i~f~f-~g~~~~l~~~~yi 322 (375)
T 1miq_A 255 -EKANVIVDSGTTTITAPSEFLNKFFANLNVIKV----PFLPFYVTTCDN------KEMPTLEFKS-ANNTYTLEPEYYM 322 (375)
T ss_dssp -EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEC----TTSSCEEEETTC------TTCCCEEEEC-SSCEEEECGGGSE
T ss_pred -ccceEEecCCCccEEcCHHHHHHHHHHhCCccc----CCCCeEEEECCC------CCCCcEEEEE-CCEEEEECHHHhE
Confidence 567899999999999999999999998754321 111223455664 4789999999 7899999999999
Q ss_pred EEeeccccEEEE-EEEecCC--CceEEcceeeeeEEEEEeCCCCEEEEeeCC
Q 010525 380 IYGTQVVTGFCL-AIQPVDG--DIGTIGQNFMTGYRVVFDRENLKLGWSHSN 428 (508)
Q Consensus 380 ~~~~~~~~~~Cl-~i~~~~~--~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 428 (508)
+.........|+ +|++.+. +.||||+.|||++|+|||++++|||||+.+
T Consensus 323 ~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 323 NPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred eeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 876431235787 7887763 689999999999999999999999999863
No 29
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=9.1e-49 Score=416.47 Aligned_cols=304 Identities=23% Similarity=0.363 Sum_probs=240.7
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc-CC---CCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CV---RCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTS 154 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~---~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~ 154 (508)
.+...|..|+|+|++.|++||||+++||+|. |. .|.. ++.|||++|+||+...
T Consensus 53 ~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~------------~~~y~~~~SsT~~~~~----------- 109 (478)
T 1qdm_A 53 QYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYL------------HSRYKAGASSTYKKNG----------- 109 (478)
T ss_dssp CEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGG------------SCCBCGGGCTTCBCCC-----------
T ss_pred EEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccC------------CCCCCcccCCCeeeCC-----------
Confidence 4567788999999999999999999999998 85 4643 4699999999999654
Q ss_pred CCCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCCC--
Q 010525 155 CQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS-- 232 (508)
Q Consensus 155 C~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~S-- 232 (508)
|.|.+.|++| +++|.+++|+|+|++. ...++.|||++.+.+..+.....|||||||+..++
T Consensus 110 -------~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~ 172 (478)
T 1qdm_A 110 -------KPAAIQYGTG--SIAGYFSEDSVTVGDL--------VVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVG 172 (478)
T ss_dssp -------CEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGG
T ss_pred -------cEEEEEcCCC--CeEEEEEEEEEEECCe--------EECCEEEEEEEecCCcccccccccceecccccccccC
Confidence 8999999996 5899999999999875 45789999999876642222356999999998766
Q ss_pred ----hHHHHHhcCCc-cceeEEeeecC----CCccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEECCeeec
Q 010525 233 ----VPSLLAKAGLI-RNSFSMCFDKD----DSGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCIGSSCLK 299 (508)
Q Consensus 233 ----~~~qL~~~gli-~~~FSl~l~~~----~~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~ 299 (508)
+..+|+++|+| +++||+||+++ ..|.|+||++|+.++ .|+|+.. ..+|.|++++|.||++.+.
T Consensus 173 ~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~----~~~w~v~l~~i~v~g~~~~ 248 (478)
T 1qdm_A 173 KAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQ----KGYWQFDMGDVLVGGKSTG 248 (478)
T ss_dssp GCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEE----ETTEEEEECCEEETTEECS
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccC----CCeEEEEEeEEEECCEEEe
Confidence 46789999999 79999999875 379999999998764 5888854 3689999999999998865
Q ss_pred --cCccceEEccCccceeccHHHHHHHHHHHHHhc----------------------cCc-----------------c--
Q 010525 300 --QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQV----------------------NDT-----------------I-- 336 (508)
Q Consensus 300 --~~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v----------------------~~~-----------------~-- 336 (508)
.....+||||||++++||+++|++|.++|.... ... +
T Consensus 249 ~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~ 328 (478)
T 1qdm_A 249 FCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGV 328 (478)
T ss_dssp TTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC--------
T ss_pred ecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCccccc
Confidence 245689999999999999999999998875321 000 0
Q ss_pred ------ccc-------c-------------------------------cccccccccc---------ccCCCCCCCeEEE
Q 010525 337 ------TSF-------E-------------------------------GYPWKCCYKS---------SSQRLPKLPSVKL 363 (508)
Q Consensus 337 ------~~~-------~-------------------------------~~~~~~C~~~---------~~~~~~~~P~i~f 363 (508)
... . ....+.|+.. +|..+..+|+|+|
T Consensus 329 ~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~~lP~i~f 408 (478)
T 1qdm_A 329 SAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEF 408 (478)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGTTCCCEEE
T ss_pred cccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccccccccEEE
Confidence 000 0 0002345433 3444568999999
Q ss_pred EecCCCeEEEcCCeEEEEeeccccEEEEE-EEecC-----CCceEEcceeeeeEEEEEeCCCCEEEEeeC
Q 010525 364 MFPQNNSFVVNNPVFVIYGTQVVTGFCLA-IQPVD-----GDIGTIGQNFMTGYRVVFDRENLKLGWSHS 427 (508)
Q Consensus 364 ~f~g~~~~~i~~~~~~~~~~~~~~~~Cl~-i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 427 (508)
+| ||..|++++++|++...++....|++ |+..+ ++.||||+.|||++|+|||++|+|||||++
T Consensus 409 ~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 409 TI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKA 477 (478)
T ss_dssp EE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeC
Confidence 99 78899999999998865443567885 66532 467999999999999999999999999985
No 30
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.4e-48 Score=396.13 Aligned_cols=290 Identities=19% Similarity=0.251 Sum_probs=231.0
Q ss_pred CceeeeecCCCceeEeccccCCceeEEecc-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCC
Q 010525 80 QFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNP 158 (508)
Q Consensus 80 ~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~~ 158 (508)
+...|..+ +|++.|++||||+++||+|. |..|..+ .++.|||++|+ ++..
T Consensus 17 Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~----------~~~~y~~~~Ss-~~~~---------------- 67 (323)
T 1izd_A 17 YITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERS----------GHDYYTPGSSA-QKID---------------- 67 (323)
T ss_dssp EEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT----------TCCCBCCCTTC-EEEE----------------
T ss_pred EEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccccc----------CCCCCCccccC-CccC----------------
Confidence 44556666 89999999999999999998 9876422 35799999999 5532
Q ss_pred CCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCCC------
Q 010525 159 KQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS------ 232 (508)
Q Consensus 159 ~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~S------ 232 (508)
+|.|.+.|++| +.++|.+++|+|+|++. ..+++.|||++.+++.+......+||||||+..++
T Consensus 68 --~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~ 136 (323)
T 1izd_A 68 --GATWSISYGDG-SSASGDVYKDKVTVGGV--------SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTP 136 (323)
T ss_dssp --EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSC
T ss_pred --CCeEEEEcCCC-CeEEEEEEEEEEEECCE--------EECceEEEEEEeccccccccCCCceEEecCcccccccCCCC
Confidence 38999999995 66899999999999875 45789999999887655433356999999997544
Q ss_pred ---hHHHHHhcCCccceeEEeeecCCCccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEECCeeeccCccce
Q 010525 233 ---VPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKA 305 (508)
Q Consensus 233 ---~~~qL~~~gli~~~FSl~l~~~~~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~~~~~a 305 (508)
++++|+++ +.+++||+||.++..|.|+||++|+.++ .|+|++. ...+|.|++++|.||+ .+......+
T Consensus 137 ~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~w~v~l~~i~v~~-~~~~~~~~a 211 (323)
T 1izd_A 137 QKTFFDNVKSS-LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDN---SQGFWGFTADGYSIGS-DSSSDSITG 211 (323)
T ss_dssp CCCHHHHHGGG-SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBC---TTSSCEEEESEEEETT-EEECCCEEE
T ss_pred CCCHHHHHHHh-ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCC---CCceEEEEECeEEECC-cccCCCceE
Confidence 56889876 4489999999987789999999999764 5788753 2468999999999999 666567789
Q ss_pred EEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEEEEeecc
Q 010525 306 IVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQV 385 (508)
Q Consensus 306 iiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~~~~~~~ 385 (508)
||||||++++||+++|++|.++|.. .............|+ ..+|+|+|+| ||.+++|++++|++....
T Consensus 212 iiDSGTs~~~lp~~~~~~i~~~i~g---a~~~~~~g~~~~~C~-------~~~P~i~f~f-gg~~~~i~~~~~~~~~~~- 279 (323)
T 1izd_A 212 IADTGTTLLLLDDSIVDAYYEQVNG---ASYDSSQGGYVFPSS-------ASLPDFSVTI-GDYTATVPGEYISFADVG- 279 (323)
T ss_dssp EECTTCCSEEECHHHHHHHHTTSTT---CEEETTTTEEEEETT-------CCCCCEEEEE-TTEEEEECHHHHEEEECS-
T ss_pred EEeCCCcceeCCHHHHHHHHHhCCC---cEEcCcCCEEEEECC-------CCCceEEEEE-CCEEEecCHHHeEEecCC-
Confidence 9999999999999999998877532 111111112223454 3689999999 789999999888876532
Q ss_pred ccEEEEE-EEecC-CCceEEcceeeeeEEEEEeCCCCEEEEeeC
Q 010525 386 VTGFCLA-IQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHS 427 (508)
Q Consensus 386 ~~~~Cl~-i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 427 (508)
...|++ |+..+ .+.||||+.|||++|+|||++++|||||+.
T Consensus 280 -~~~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1izd_A 280 -NGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQ 322 (323)
T ss_dssp -TTEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred -CCeEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeC
Confidence 467886 77754 468999999999999999999999999985
No 31
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1e-48 Score=397.25 Aligned_cols=290 Identities=19% Similarity=0.266 Sum_probs=230.3
Q ss_pred CceeeeecCCCceeEeccccCCceeEEecc-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCC
Q 010525 80 QFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNP 158 (508)
Q Consensus 80 ~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~~ 158 (508)
+...|..+ +|++.|++||||+++||+|. |..|..+ .++.|||++|+ ++..
T Consensus 17 Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~----------~~~~y~~~~Ss-~~~~---------------- 67 (323)
T 1bxo_A 17 YITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQS----------GHSVYNPSATG-KELS---------------- 67 (323)
T ss_dssp EEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT----------TSCCBCHHHHC-EEEE----------------
T ss_pred EEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhcc----------CCCCCCcccCC-cccC----------------
Confidence 44556666 99999999999999999998 9876422 35799999998 6532
Q ss_pred CCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCC-------
Q 010525 159 KQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEI------- 231 (508)
Q Consensus 159 ~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~------- 231 (508)
+|.|+++|++| +.++|.+++|+|+|++. ..+++.|||++.+++.+......|||||||+..+
T Consensus 68 --~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 136 (323)
T 1bxo_A 68 --GYTWSISYGDG-SSASGNVFTDSVTVGGV--------TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQS 136 (323)
T ss_dssp --EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSC
T ss_pred --CCeEEEEeCCC-CeEEEEEEEEEEEECCE--------EECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCC
Confidence 38999999995 66899999999999875 4578999999998776554345699999999754
Q ss_pred --ChHHHHHhcCCccceeEEeeecCCCccEEeccCCCCC----ceEeeeEEcCCCceeEEEEeeeEEECCeeeccCccce
Q 010525 232 --SVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKA 305 (508)
Q Consensus 232 --S~~~qL~~~gli~~~FSl~l~~~~~G~i~fG~~d~~~----~~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~~~~~a 305 (508)
+++++|+++ +.+++||+||+++..|.|+||++|+.+ +.|+|++.. ..+|.|+|++|.||+ +......+
T Consensus 137 ~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~--~~~~~~~a 210 (323)
T 1bxo_A 137 QTTFFDTVKSS-LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNS---QGFWSFNVDSYTAGS--QSGDGFSG 210 (323)
T ss_dssp CCCHHHHHGGG-BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEEEEEEETT--EEEEEEEE
T ss_pred CCCHHHHHHHh-cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCC---CCeEEEEEeeEEECC--ccCCCceE
Confidence 367889876 338999999998778999999999864 468888532 468999999999999 33356789
Q ss_pred EEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEEEEeecc
Q 010525 306 IVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQV 385 (508)
Q Consensus 306 iiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~~~~~~~ 385 (508)
||||||++++||+++|++|.++|... ............|+ ..+|+|+|+| ||..++|++++|++....+
T Consensus 211 iiDSGTs~~~lP~~~~~~l~~~i~~a---~~~~~~g~~~~~C~-------~~~P~i~f~f-gg~~~~l~~~~~~~~~~~~ 279 (323)
T 1bxo_A 211 IADTGTTLLLLDDSVVSQYYSQVSGA---QQDSNAGGYVFDCS-------TNLPDFSVSI-SGYTATVPGSLINYGPSGD 279 (323)
T ss_dssp EECTTCSSEEECHHHHHHHHTTSTTC---EEETTTTEEEECTT-------CCCCCEEEEE-TTEEEEECHHHHEEEECSS
T ss_pred EEeCCCCceeCCHHHHHHHHHhCCCc---eEcCcCCEEEEECC-------CCCceEEEEE-CCEEEEECHHHeEEeccCC
Confidence 99999999999999999988875321 11111112223455 3689999999 7889999998888765322
Q ss_pred ccEEEEE-EEecC-CCceEEcceeeeeEEEEEeCCCCEEEEeeC
Q 010525 386 VTGFCLA-IQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHS 427 (508)
Q Consensus 386 ~~~~Cl~-i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 427 (508)
...|++ |++.+ .+.||||+.|||++|+|||++|+|||||+.
T Consensus 280 -~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1bxo_A 280 -GSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQ 322 (323)
T ss_dssp -SSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred -CCeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecC
Confidence 357886 77654 468999999999999999999999999986
No 32
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.1e-47 Score=404.81 Aligned_cols=288 Identities=17% Similarity=0.315 Sum_probs=235.7
Q ss_pred CceeeeecCCCceeEeccccCCceeEEecc-CC--CCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCCC
Q 010525 80 QFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CV--RCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQ 156 (508)
Q Consensus 80 ~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~--~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~ 156 (508)
+...|..|+|+|++.|++||||+++||+|. |. .|.. ++.|||++|+|++...
T Consensus 139 Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~------------~~~ydps~SsT~~~~~------------- 193 (451)
T 3qvc_A 139 SFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCES------------KNHYDSSKSKTYEKDD------------- 193 (451)
T ss_dssp EEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTT------------SCCBCGGGCTTCEEEE-------------
T ss_pred EEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCC------------CCCCCCCCCcccccCC-------------
Confidence 456788899999999999999999999998 83 5643 4699999999999765
Q ss_pred CCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEe----ccCCCCCCCCCCeEEecCCCCC-
Q 010525 157 NPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMK----QSGGYLDGVAPDGLIGLGLGEI- 231 (508)
Q Consensus 157 ~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~----~sg~~~~~~~~dGIlGLg~~~~- 231 (508)
|.|.+.|++| ++.|.+++|+|+|++. ..+ +.|||++. +++ |.. ...|||||||++.+
T Consensus 194 -----~~f~i~YgdG--s~~G~~~~Dtv~igg~--------~v~-~~Fg~a~~t~~~~~~-f~~-~~~dGILGLg~~~~s 255 (451)
T 3qvc_A 194 -----TPVKLTSKAG--TISGIFSKDLVTIGKL--------SVP-YKFIEMTEIVGFEPF-YSE-SDVDGVFGLGWKDLS 255 (451)
T ss_dssp -----EEEEEECSSE--EEEEEEEEEEEEETTE--------EEE-EEEEEEEEEEECTTH-HHH-SCCCEEEECSSBCSS
T ss_pred -----CEEEEEECCC--EEEEEEEEEEEEECCE--------EEE-EEEEEEEeccccCCC-ccC-CCCCEEEecCCCccc
Confidence 8999999996 4999999999999876 446 99999998 665 322 24699999999864
Q ss_pred -----ChHHHHHhcCCc-cceeEEeeecCC--CccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEECCeeec
Q 010525 232 -----SVPSLLAKAGLI-RNSFSMCFDKDD--SGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCIGSSCLK 299 (508)
Q Consensus 232 -----S~~~qL~~~gli-~~~FSl~l~~~~--~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~ 299 (508)
+++++|+++|+| +++||+||++.. .|.|+||++|+.++ .|+|++. ..+|.|+++ |.||++ .
T Consensus 256 ~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~----~~~w~v~l~-I~Vgg~--~ 328 (451)
T 3qvc_A 256 IGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNH----DLMWQVDLD-VHFGNV--S 328 (451)
T ss_dssp SSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSS----TTSSEEEEE-EEETTE--E
T ss_pred ccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEccc----CCeeEEEEE-EEECCc--c
Confidence 578999999999 899999999863 69999999998764 5777742 478999999 999998 3
Q ss_pred cCccceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEE
Q 010525 300 QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFV 379 (508)
Q Consensus 300 ~~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~ 379 (508)
.....+||||||++++||++++++|.+++... ..... .+|..+|. ...+|+|+|+| ||..++|++++|+
T Consensus 329 ~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~----~~~~~-----g~y~v~C~-~~~~P~itf~f-gg~~i~lp~~~yi 397 (451)
T 3qvc_A 329 SKKANVILDSATSVITVPTEFFNQFVESASVF----KVPFL-----SLYVTTCG-NTKLPTLEYRS-PNKVYTLEPKQYL 397 (451)
T ss_dssp EEEEEEEECTTBSSEEECHHHHHHHHTTTTCE----ECTTS-----SCEEEETT-CTTCCCEEEEE-TTEEEEECHHHHE
T ss_pred CCCceEEEeCCCccccCCHHHHHHHHHHcCCe----ecCCC-----CeEEeeCC-cCcCCcEEEEE-CCEEEEEcHHHhe
Confidence 35568999999999999999999988876332 21111 23444555 56889999999 6899999999999
Q ss_pred EEeeccccEEEE-EEEecC--CCceEEcceeeeeEEEEEeCCCCEEEEeeCC
Q 010525 380 IYGTQVVTGFCL-AIQPVD--GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 428 (508)
Q Consensus 380 ~~~~~~~~~~Cl-~i~~~~--~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 428 (508)
+.........|+ ++++.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 398 ~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 398 EPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred eecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 876432234565 688776 4689999999999999999999999999874
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=6.4e-47 Score=386.70 Aligned_cols=290 Identities=19% Similarity=0.276 Sum_probs=231.5
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEeccCCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNP 158 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~~ 158 (508)
.+...|..++|+|++.|++||||+++||+|. +.|+|++|+++.
T Consensus 13 ~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-------------------~~y~~s~Ss~~~------------------ 55 (340)
T 1wkr_A 13 DYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-------------------KSYVKTSTSSAT------------------ 55 (340)
T ss_dssp CEEEEEEETTTTEEEEEEEETTCCCCEECSS-------------------SCCCCCTTCEEE------------------
T ss_pred EEEEEEEECCCCcEEEEEEeCCChhheecCC-------------------CccCCcCCcccc------------------
Confidence 4567788999999999999999999999873 589998887553
Q ss_pred CCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCC-------
Q 010525 159 KQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEI------- 231 (508)
Q Consensus 159 ~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~------- 231 (508)
.|.|.+.|++| +++|.+++|+|+|++. ..+++.|||++.+.+ |. ..+||||||+..+
T Consensus 56 --~~~~~i~Yg~G--s~~G~~~~Dtv~~g~~--------~v~~~~fg~~~~~~~-~~---~~~GilGLg~~~~s~~~~~~ 119 (340)
T 1wkr_A 56 --SDKVSVTYGSG--SFSGTEYTDTVTLGSL--------TIPKQSIGVASRDSG-FD---GVDGILGVGPVDLTVGTLSP 119 (340)
T ss_dssp --EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEEES-CT---TCSEEEECSCGGGGTTSEES
T ss_pred --CceEEEEECCc--EEEEEEEEEEEEECCE--------EEcceEEEEEEccCC-Cc---CCCcEEECCccccccccccc
Confidence 38999999996 4899999999999875 457899999999876 32 4689999998754
Q ss_pred -------ChHHHHHhcCCc-cceeEEeeecC-----CCccEEeccCCCCC----ceEeeeEEcCCCceeEEEEeeeEEEC
Q 010525 232 -------SVPSLLAKAGLI-RNSFSMCFDKD-----DSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCCIG 294 (508)
Q Consensus 232 -------S~~~qL~~~gli-~~~FSl~l~~~-----~~G~i~fG~~d~~~----~~~tp~v~~~~~~~~y~V~l~~i~Vg 294 (508)
+++++|+++|+| +++||+||.+. ..|.|+||++|+.+ +.|+|++..+....+|.|. ++|.||
T Consensus 120 ~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~ 198 (340)
T 1wkr_A 120 HTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYG 198 (340)
T ss_dssp CTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEET
T ss_pred cccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEEC
Confidence 457899999999 79999999863 36999999999854 4699987643335799999 999999
Q ss_pred C-eeeccCccceEEccCccceeccHHHHHHHHHHHHHhccCccccccccccccccccccCCCCCCCeEEEEecCCCeEEE
Q 010525 295 S-SCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVV 373 (508)
Q Consensus 295 ~-~~~~~~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i 373 (508)
+ +.+. ....+||||||++++||+++|++|.+++.++.. .........|.. ...+|+|+|+| +|..+.+
T Consensus 199 ~~~~l~-~~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~----~~~g~~~~~C~~-----~~~~p~i~f~f-~g~~~~i 267 (340)
T 1wkr_A 199 SSTSIL-SSTAGIVDTGTTLTLIASDAFAKYKKATGAVAD----NNTGLLRLTTAQ-----YANLQSLFFTI-GGQTFEL 267 (340)
T ss_dssp TTEEEE-EEEEEEECTTBCSEEECHHHHHHHHHHHTCEEC----TTTSSEEECHHH-----HHTCCCEEEEE-TTEEEEE
T ss_pred CCeEcc-CCCeEEEeCCcccccCCHHHHHHHHHhhCCEEc----CCCCeEEeeccc-----cccCCcEEEEE-CCEEEEE
Confidence 8 8775 346899999999999999999999887654321 111122234443 34789999999 6789999
Q ss_pred cCCeEEEEeec-----c-ccEEEEEEEecC-----CCceEEcceeeeeEEEEEeCCCCEEEEeeCCCCCCC
Q 010525 374 NNPVFVIYGTQ-----V-VTGFCLAIQPVD-----GDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLN 433 (508)
Q Consensus 374 ~~~~~~~~~~~-----~-~~~~Cl~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~~ 433 (508)
++++|+++... + ...||+++.+.+ +..||||+.|||++|+|||++++|||||+.+|++.+
T Consensus 268 ~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~ 338 (340)
T 1wkr_A 268 TANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTAT 338 (340)
T ss_dssp CTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTCC
T ss_pred cHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCCC
Confidence 99999876432 1 134556776532 246999999999999999999999999999998643
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=4.3e-37 Score=298.54 Aligned_cols=207 Identities=22% Similarity=0.321 Sum_probs=174.1
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc-CC---CCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CV---RCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTS 154 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~---~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~ 154 (508)
.+...|..++|+|++.|++||||+++||+|. |. .|.. ++.|||++|+||+...
T Consensus 14 ~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~------------~~~y~~~~SsT~~~~~----------- 70 (239)
T 1b5f_A 14 SYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRA------------HSMYESSDSSTYKENG----------- 70 (239)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHT------------SCCBCGGGCTTCEEEE-----------
T ss_pred EEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCC------------CCCCCCccCCCeeeCC-----------
Confidence 3566788899999999999999999999998 86 4643 3689999999999865
Q ss_pred CCCCCCCCCeeeecCCCCceeeeEEEEEEEEeccCCCCccccccccceEEEeEEeccCCCCCCCCCCeEEecCCCCCC--
Q 010525 155 CQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS-- 232 (508)
Q Consensus 155 C~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~S-- 232 (508)
|.|.+.|++| +++|.+++|+|+|++. ...++.|||+..+.+..+.....|||||||+..++
T Consensus 71 -------~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p 133 (239)
T 1b5f_A 71 -------TFGAIIYGTG--SITGFFSQDSVTIGDL--------VVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVP 133 (239)
T ss_dssp -------EEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCC
T ss_pred -------cEEEEEECCC--cEEEEEEEEEEEECCc--------EEccEEEEEEEeccCccccccCcceEEecCccccccH
Confidence 8899999996 5899999999999875 45789999999876532222356999999999887
Q ss_pred hHHHHHhcCCc-cceeEEeeecC----CCccEEeccCCCCCc----eEeeeEEcCCCceeEEEEeeeEEECCeeec--cC
Q 010525 233 VPSLLAKAGLI-RNSFSMCFDKD----DSGRIFFGDQGPATQ----QSTSFLASNGKYITYIIGVETCCIGSSCLK--QT 301 (508)
Q Consensus 233 ~~~qL~~~gli-~~~FSl~l~~~----~~G~i~fG~~d~~~~----~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~--~~ 301 (508)
+..+|+++|+| +++||+||++. ..|.|+||++|+.++ .|+|++. ..+|.|+|++|.||++.+. ..
T Consensus 134 ~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~~ 209 (239)
T 1b5f_A 134 VWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTY----QYYWQFGIGDVLIGDKSTGFCAP 209 (239)
T ss_dssp HHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEE----ETTEEEEECCEEETTEECCTTTT
T ss_pred HHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEccc----CCeEEEEeeEEEECCEEecccCC
Confidence 45679999998 79999999874 469999999998753 5888864 3689999999999998875 34
Q ss_pred ccceEEccCccceeccHHHHHHHHHHHH
Q 010525 302 SFKAIVDSGSSFTFLPKEVYETIAAEFD 329 (508)
Q Consensus 302 ~~~aiiDSGTs~t~LP~~~~~~l~~~i~ 329 (508)
...+||||||++++||+++|++|.++|.
T Consensus 210 ~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 210 GCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp CEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred CCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 5689999999999999999999988854
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.2e-35 Score=288.57 Aligned_cols=216 Identities=21% Similarity=0.358 Sum_probs=173.3
Q ss_pred cccceEEEeEEeccCCCCCCCCCCeEEecCCCCCC------hHHHHHhcCCc-cceeEEeeecCC----CccEEeccCCC
Q 010525 198 VQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKDD----SGRIFFGDQGP 266 (508)
Q Consensus 198 ~~~~~~fg~~~~~sg~~~~~~~~dGIlGLg~~~~S------~~~qL~~~gli-~~~FSl~l~~~~----~G~i~fG~~d~ 266 (508)
..+++.|||++.+++.++.....|||||||++.++ ++++|+++|+| +++||+||++.. .|.|+||++|+
T Consensus 4 ~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~ 83 (241)
T 1lya_B 4 KVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDS 83 (241)
T ss_dssp EEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCCG
T ss_pred EECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcCH
Confidence 34789999999988765554567999999998654 67899999999 899999998762 79999999998
Q ss_pred CCc----eEeeeEEcCCCceeEEEEeeeEEECCeeec-cCccceEEccCccceeccHHHHHHHHHHHHHhccCccccccc
Q 010525 267 ATQ----QSTSFLASNGKYITYIIGVETCCIGSSCLK-QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEG 341 (508)
Q Consensus 267 ~~~----~~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~-~~~~~aiiDSGTs~t~LP~~~~~~l~~~i~~~v~~~~~~~~~ 341 (508)
.++ .|+|++. ..+|.|++++|.||++.+. .....+||||||++++||+++|++|.+++.... .. ..
T Consensus 84 ~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~----~~-~g 154 (241)
T 1lya_B 84 KYYKGSLSYLNVTR----KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP----LI-QG 154 (241)
T ss_dssp GGEEEEEEEEECSS----BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE----EE-TT
T ss_pred HHcCCceEEEECcc----ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCee----cc-CC
Confidence 764 4777742 4789999999999998743 356789999999999999999999999874332 11 11
Q ss_pred cccccccccccCCCCCCCeEEEEecCCCeEEEcCCeEEEEeeccccEEEE-EEEecC-----CCceEEcceeeeeEEEEE
Q 010525 342 YPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPVD-----GDIGTIGQNFMTGYRVVF 415 (508)
Q Consensus 342 ~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVF 415 (508)
.....|+.. ..+|+|+|+| ||.+++|++++|++.........|+ +|+..+ .+.||||++|||++|+||
T Consensus 155 ~~~~~C~~~-----~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vf 228 (241)
T 1lya_B 155 EYMIPCEKV-----STLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVF 228 (241)
T ss_dssp EEEEEGGGG-----GGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEEEEE
T ss_pred cEEEECCCC-----ccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcceEEEE
Confidence 223456543 4789999999 7889999999999876532245787 587752 468999999999999999
Q ss_pred eCCCCEEEEeeCC
Q 010525 416 DRENLKLGWSHSN 428 (508)
Q Consensus 416 D~e~~rIGfa~~~ 428 (508)
|++++|||||+.+
T Consensus 229 D~~~~~igfA~~~ 241 (241)
T 1lya_B 229 DRDNNRVGFAEAA 241 (241)
T ss_dssp ETTTTEEEEEEEC
T ss_pred ECCCCEEEEEEcC
Confidence 9999999999863
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.67 E-value=4e-17 Score=135.06 Aligned_cols=78 Identities=22% Similarity=0.353 Sum_probs=68.6
Q ss_pred CCceeeeecCCCceeEeccccCCceeEEecc-CC----CCCCCccccccccCCCCCCCCCCCCCCCccccCCCcCCCCCC
Q 010525 79 PQFQMLFPSQGSKTMSLGNDFGCDLLWIPCD-CV----RCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGT 153 (508)
Q Consensus 79 ~~~~~l~~~~g~q~~~l~~DTGS~~~WV~c~-C~----~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~ 153 (508)
.+...|.+++|+|++.|++||||+++||+|. |. .|.. ++.|||++|+||+...
T Consensus 14 ~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~------------~~~y~p~~SsT~~~~~---------- 71 (97)
T 1lya_A 14 QYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWI------------HHKYNSDKSSTYVKNG---------- 71 (97)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHT------------SCCBCGGGCTTCEEEE----------
T ss_pred eEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCC------------CCCCCchhCCCceeCC----------
Confidence 3566788899999999999999999999998 86 4643 4799999999999876
Q ss_pred CCCCCCCCCCeeeecCCCCceeeeEEEEEEEEecc
Q 010525 154 SCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLIS 188 (508)
Q Consensus 154 ~C~~~~~~c~y~i~Y~dg~s~~~G~l~~D~v~l~~ 188 (508)
|.|.|.|++| ++.|.+++|+|+|++
T Consensus 72 --------~~~~i~Yg~G--s~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 --------TSFDIHYGSG--SLSGYLSQDTVSVPC 96 (97)
T ss_dssp --------EEEEEECSSC--EEEEEEEEEEEEESC
T ss_pred --------CcEEEEECCc--EEEEEEEEEEEEECC
Confidence 8999999996 489999999999975
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.58 E-value=6.2e-16 Score=125.42 Aligned_cols=78 Identities=21% Similarity=0.425 Sum_probs=62.8
Q ss_pred cccCCCCCCCeEEEEecCCCeEEEcCCeEEEEeeccccEEEE-EEEec----CCCceEEcceeeeeEEEEEeCCCCEEEE
Q 010525 350 SSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPV----DGDIGTIGQNFMTGYRVVFDRENLKLGW 424 (508)
Q Consensus 350 ~~~~~~~~~P~i~f~f~g~~~~~i~~~~~~~~~~~~~~~~Cl-~i~~~----~~~~~IlG~~fl~~~yvVFD~e~~rIGf 424 (508)
.+|.....+|+|+|+| ||..+++++++|++....+....|+ +++.. .++.||||+.|||++|+|||++|+||||
T Consensus 5 v~C~~~~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGf 83 (87)
T 1b5f_B 5 VDCNTLSSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGF 83 (87)
T ss_dssp ECGGGGGGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEE
T ss_pred EECCCCCcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEE
Confidence 3443335789999999 7889999999999876543346788 58764 2457999999999999999999999999
Q ss_pred eeCC
Q 010525 425 SHSN 428 (508)
Q Consensus 425 a~~~ 428 (508)
|+.+
T Consensus 84 A~~~ 87 (87)
T 1b5f_B 84 AEAA 87 (87)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 9863
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.47 E-value=0.1 Score=45.30 Aligned_cols=26 Identities=15% Similarity=0.058 Sum_probs=24.6
Q ss_pred ceEEcceeeeeEEEEEeCCCCEEEEe
Q 010525 400 IGTIGQNFMTGYRVVFDRENLKLGWS 425 (508)
Q Consensus 400 ~~IlG~~fl~~~yvVFD~e~~rIGfa 425 (508)
..|||..||+++.++.|.++++|-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 48999999999999999999999996
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=93.08 E-value=0.15 Score=44.56 Aligned_cols=36 Identities=11% Similarity=0.002 Sum_probs=29.2
Q ss_pred EEecCCCceEEcceeeeeEEEEEeCCCCEEEEeeCC
Q 010525 393 IQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 428 (508)
Q Consensus 393 i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 428 (508)
+.+...-..|||..||+.+-.+.|++++++-|...+
T Consensus 101 Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~~ 136 (148)
T 3s8i_A 101 ILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTTG 136 (148)
T ss_dssp EETTCSSSEEECHHHHHHTTCEEETTTTEEECTTTC
T ss_pred EeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEccCC
Confidence 344333358999999999999999999999997754
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=57.71 E-value=7.7 Score=33.08 Aligned_cols=21 Identities=10% Similarity=0.012 Sum_probs=18.1
Q ss_pred CCceeEeccccCCceeEEecc
Q 010525 89 GSKTMSLGNDFGCDLLWIPCD 109 (508)
Q Consensus 89 g~q~~~l~~DTGS~~~WV~c~ 109 (508)
.++++++++|||++.+-+.-.
T Consensus 34 nG~~~~~LvDTGAs~s~is~~ 54 (148)
T 2i1a_A 34 NNYPVKAFVDTGAQTTIMSTR 54 (148)
T ss_dssp TTEEEEEEECTTCSSCEEEHH
T ss_pred CCEEEEEEEECCCCccccCHH
Confidence 567999999999999988754
No 41
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=40.74 E-value=15 Score=29.11 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=27.2
Q ss_pred eeeEEcCCCceeEEEEeeeEEECCeeeccCccceEEccCccceeccHH
Q 010525 272 TSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 319 (508)
Q Consensus 272 tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~~~~~aiiDSGTs~t~LP~~ 319 (508)
.|+.+.. ...|.++ |.||.- +..+.++||||++.+++|..
T Consensus 5 ~~l~n~~--~~~Y~~~---i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 5 EVLKNYM--DAQYYGE---IGIGTP---PQCFTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEEET--TTEEEEE---EEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred EeeEECC--CCeEEEE---EEECCC---CeEEEEEEeCCCCceEEeEc
Confidence 4554322 2456664 778852 24567999999999999864
No 42
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=31.87 E-value=19 Score=29.02 Aligned_cols=20 Identities=15% Similarity=0.167 Sum_probs=17.9
Q ss_pred CCceeEeccccCCceeEEec
Q 010525 89 GSKTMSLGNDFGCDLLWIPC 108 (508)
Q Consensus 89 g~q~~~l~~DTGS~~~WV~c 108 (508)
++|.+...+|||.|++-+.-
T Consensus 16 ~Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 16 NDTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp TTEEEEEEECTTCSSCEEEH
T ss_pred CCEEEEEEeccCCCcEEEcc
Confidence 67899999999999999973
No 43
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=29.38 E-value=23 Score=28.31 Aligned_cols=20 Identities=25% Similarity=0.087 Sum_probs=17.8
Q ss_pred CCceeEeccccCCceeEEec
Q 010525 89 GSKTMSLGNDFGCDLLWIPC 108 (508)
Q Consensus 89 g~q~~~l~~DTGS~~~WV~c 108 (508)
++|.+...+|||.|++-+.-
T Consensus 16 ~Gq~~eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 16 GGQLKEALLDTGADDTIIEE 35 (99)
T ss_dssp TTEEEEEEECTTCSSEEESC
T ss_pred CCEEEEEEeccCCCcEEEec
Confidence 67899999999999999863
No 44
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=27.36 E-value=45 Score=32.22 Aligned_cols=33 Identities=15% Similarity=0.274 Sum_probs=24.7
Q ss_pred ceeEEEEeeeEEECCeeeccCccceEEccCccceeccHHHH
Q 010525 281 YITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVY 321 (508)
Q Consensus 281 ~~~y~V~l~~i~Vg~~~~~~~~~~aiiDSGTs~t~LP~~~~ 321 (508)
...|.++ |.|| +..+.++||||++.+++|..-.
T Consensus 13 ~~~Y~~~---i~iG-----~Q~~~v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 13 DEEYLTP---VTVG-----KSTLHLDFDTGSADLWVFSDEL 45 (325)
T ss_dssp TSCEEEE---EEEB-----TEEEEEEEETTCCCEEEECTTS
T ss_pred CCEEEEE---EEEC-----CEEEEEEEeCCCccceEeeCCC
Confidence 3567664 6788 2557799999999999997543
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=24.55 E-value=31 Score=28.42 Aligned_cols=20 Identities=15% Similarity=0.150 Sum_probs=18.0
Q ss_pred CCceeEeccccCCceeEEec
Q 010525 89 GSKTMSLGNDFGCDLLWIPC 108 (508)
Q Consensus 89 g~q~~~l~~DTGS~~~WV~c 108 (508)
++|.+...+|||.|++-+.-
T Consensus 21 ~Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 21 NGYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp TTEEEEEEECTTCSSCEEEG
T ss_pred CCEEEEEEecCCCCcEEEcc
Confidence 67999999999999999864
No 46
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=21.37 E-value=61 Score=27.25 Aligned_cols=24 Identities=25% Similarity=0.451 Sum_probs=20.1
Q ss_pred eEEECCeeeccCccceEEccCccceeccH
Q 010525 290 TCCIGSSCLKQTSFKAIVDSGSSFTFLPK 318 (508)
Q Consensus 290 ~i~Vg~~~~~~~~~~aiiDSGTs~t~LP~ 318 (508)
.+.|||+.++ +++|||...+.|.+
T Consensus 26 ~i~I~G~~~~-----~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 26 TLKVGGQPVT-----FLVDTGAQHSVLTQ 49 (132)
T ss_dssp EEEETTEEEE-----EEECTTCSSCEECS
T ss_pred EEEECCEEEE-----EEEeCCCCeEEEcc
Confidence 4778887655 89999999999887
No 47
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=21.29 E-value=82 Score=28.81 Aligned_cols=40 Identities=25% Similarity=0.449 Sum_probs=27.0
Q ss_pred eeeEEcCCCceeEEEEeeeEEECCeeeccCccceEEccCccceeccHH
Q 010525 272 TSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 319 (508)
Q Consensus 272 tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~~~~~aiiDSGTs~t~LP~~ 319 (508)
.|+.... ...|.++ |.||.- +..+.++||||++.+++|..
T Consensus 5 ~~l~n~~--~~~Y~~~---i~iGtP---~q~~~v~~DTGSs~lWv~~~ 44 (239)
T 1b5f_A 5 VALTNDR--DTSYFGE---IGIGTP---PQKFTVIFDTGSSVLWVPSS 44 (239)
T ss_dssp EEEEEET--TTEEEEE---EEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred eeeeecC--CCEEEEE---EEECCC---CeEEEEEEeCCCcceEEEcC
Confidence 5554322 2457664 678852 24567999999999999864
No 48
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=21.09 E-value=38 Score=27.01 Aligned_cols=20 Identities=15% Similarity=0.091 Sum_probs=17.6
Q ss_pred CCCceeEeccccCCceeEEe
Q 010525 88 QGSKTMSLGNDFGCDLLWIP 107 (508)
Q Consensus 88 ~g~q~~~l~~DTGS~~~WV~ 107 (508)
-++|.+...+|||.|++-+.
T Consensus 15 I~Gq~~e~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 15 IEGQPVEVLLDTGADDSIVA 34 (99)
T ss_dssp ETTEEEEEEECTTCSSCEES
T ss_pred ECCEEEEEEEecCCCceEEc
Confidence 36789999999999999885
No 49
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=21.09 E-value=77 Score=31.58 Aligned_cols=42 Identities=7% Similarity=-0.057 Sum_probs=28.6
Q ss_pred EeeeEEcCCCceeEEEEeeeEEECCeeeccCccceEEccCccceeccHH
Q 010525 271 STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 319 (508)
Q Consensus 271 ~tp~v~~~~~~~~y~V~l~~i~Vg~~~~~~~~~~aiiDSGTs~t~LP~~ 319 (508)
..|+..... ...|.+ .|.||.- +..+.++||||++.+++|-.
T Consensus 11 ~~pl~~~~~-~~~Y~~---~i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 11 VLPVQNDGS-TGLHWA---NLQKRTP---LMQVPVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEECTT-TCCEEE---EEEETTT---TEEEEEEEETTCSSEEEECS
T ss_pred EEeeecCCC-CceEEE---EEECCCC---CceeEEEEECCCCceeECCC
Confidence 467753322 356766 4678852 34577999999999999854
Done!