BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>010528
MPNAVYASTSDAVEATAYLAVEDFLHASVKGLWEAFWGHDEPMPFSVSCLYNANLKFYQA
EKAIANGKLEGLCGTGILLKNPRHPHGKIAVSPIDRIWNKLGNANWGDIGVLQILFATFH
CIIQYAGLPKHSIEDLAADHSSRLQTRRVERQLGDTGVNGNGVFRFQRHGVSTEIVEVQD
ESINIESEELMKLEIGSVLWLEDSNFQKGYQINEVLRNGDLTYYVASPVEDPGKSLFLYV
GSHPSQLEPAWQDMNLWYQVQRQTKVLTIMKQKGFSSKYLPQLSASGRIIHPGQCRRPSS
GGNCDHPLCGTPILVTSPVGETVANMVSEGRFGLDEAIRCCHDCLSALSTVSSAGIRHGD
IRPENVICVRSGVRHPYFVLIGWGHAILEDRDRPAMNLHFSSTYALQEGKLCSASDAESL
VYMLYFSCGGALPELDSVEGALQWRETSWSRRIIQQKLGDVSTVLKAFADYVDSLCGTPY
PIDYDIWLRRLRKNIHEEDHGKEIDTSG

High Scoring Gene Products

Symbol, full name Information P value
AT2G40980 protein from Arabidopsis thaliana 4.7e-207

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  010528
        (508 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2063187 - symbol:AT2G40980 species:3702 "Arabi...  1867  4.7e-207  2


>TAIR|locus:2063187 [details] [associations]
            symbol:AT2G40980 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0016772 "transferase
            activity, transferring phosphorus-containing groups" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR011009
            GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR
            SUPFAM:SSF56112 GO:GO:0016301 EMBL:AC004261 IPI:IPI00543351
            PIR:T02097 PIR:T02121 RefSeq:NP_181631.1 UniGene:At.42886
            ProteinModelPortal:Q9SLM4 PRIDE:Q9SLM4 EnsemblPlants:AT2G40980.1
            GeneID:818698 KEGG:ath:AT2G40980 TAIR:At2g40980
            HOGENOM:HOG000239088 InParanoid:Q9SLM4 OMA:PAWEDMN PhylomeDB:Q9SLM4
            ProtClustDB:CLSN2683651 Genevestigator:Q9SLM4 Uniprot:Q9SLM4
        Length = 617

 Score = 1867 (662.3 bits), Expect = 4.7e-207, Sum P(2) = 4.7e-207
 Identities = 339/423 (80%), Positives = 386/423 (91%)

Query:    86 HGKIAVSPIDRIWNKLGNANWGDIGVLQILFATFHCIIQYAGLPKHSIEDLAADHSSRLQ 145
             H KIAVSP+DRIWNKLGNANWGDIG LQ++FAT+H I+QY G P+HSIEDLAADHSSRL 
Sbjct:   197 HSKIAVSPVDRIWNKLGNANWGDIGALQVVFATYHSIMQYFGAPRHSIEDLAADHSSRLH 256

Query:   146 TRRVERQLGDTGVNGNGVFRFQRHGVSTEIVEVQDESINIESEELMKLEIGSVLWLEDSN 205
             +RR ERQLGDT ++ NG+FRFQ+  +S EIVEVQ+ES  IE E  MKLE+GSVLWLE+SN
Sbjct:   257 SRRQERQLGDTSLSENGMFRFQQSTMSPEIVEVQEESTKIEPEPSMKLEVGSVLWLEESN 316

Query:   206 FQKGYQINEVLRNGDLTYYVASPVEDPGKSLFLYVGSHPSQLEPAWQDMNLWYQVQRQTK 265
             +QKGYQINE+L NG L Y++ASPV+D GKS+FLYVGS PSQLEPAW+DMNLWYQVQRQTK
Sbjct:   317 YQKGYQINEILTNGTLPYHIASPVDDAGKSVFLYVGSPPSQLEPAWEDMNLWYQVQRQTK 376

Query:   266 VLTIMKQKGFSSKYLPQLSASGRIIHPGQCRRPSSGGNCDHPLCGTPILVTSPVGETVAN 325
             +L+IMKQ+G SSKYLPQL  SGRIIHPGQC++PSSGG CDHP CGTPILVT+PVGETVA+
Sbjct:   377 ILSIMKQRGLSSKYLPQLHGSGRIIHPGQCQKPSSGGRCDHPWCGTPILVTTPVGETVAD 436

Query:   326 MVSEGRFGLDEAIRCCHDCLSALSTVSSAGIRHGDIRPENVICVRSGVRHPYFVLIGWGH 385
             +V+EGRFG +EAIRCCHDCLSALS+ SSAGIRHGDIRPENV+ V SGVRHPYFVLIGWGH
Sbjct:   437 LVNEGRFGPEEAIRCCHDCLSALSSSSSAGIRHGDIRPENVVYVTSGVRHPYFVLIGWGH 496

Query:   386 AILEDRDRPAMNLHFSSTYALQEGKLCSASDAESLVYMLYFSCGGALPELDSVEGALQWR 445
             A+LEDRDRPAMNLHFSSTYALQEGKLC+ASDAESL+YMLYF C G  PELDSVEGALQWR
Sbjct:   497 AVLEDRDRPAMNLHFSSTYALQEGKLCAASDAESLIYMLYF-CSGDFPELDSVEGALQWR 555

Query:   446 ETSWSRRIIQQKLGDVSTVLKAFADYVDSLCGTPYPIDYDIWLRRLRKNIHEEDHGKEID 505
             ETSWS+R+IQQKLGD+STVLKAF+DYVDSLCGTPYP+DYDIWLRRL++N+  EDHGKEI+
Sbjct:   556 ETSWSKRLIQQKLGDISTVLKAFSDYVDSLCGTPYPLDYDIWLRRLKRNL-SEDHGKEIE 614

Query:   506 TSG 508
             +SG
Sbjct:   615 SSG 617

 Score = 158 (60.7 bits), Expect = 4.7e-207, Sum P(2) = 4.7e-207
 Identities = 34/67 (50%), Positives = 46/67 (68%)

Query:     1 MPNAVYASTSDAVEATAYLAVEDFLHASVKGLWEAFWGHDEPMPFSVSCLYN---ANLKF 57
             MP+ VYAS+S+A+EA AYLA+EDFLHA+VK LWEAFW   E + ++V  L     + L F
Sbjct:    93 MPSPVYASSSNALEAKAYLAIEDFLHATVKSLWEAFWS--EALFYAVRILIARSVSRLDF 150

Query:    58 YQAEKAI 64
              Q+   +
Sbjct:   151 SQSSNCV 157


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.424    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      508       508   0.00086  119 3  11 22  0.40    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  630 (67 KB)
  Total size of DFA:  335 KB (2168 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  41.28u 0.11s 41.39t   Elapsed:  00:00:02
  Total cpu time:  41.28u 0.11s 41.39t   Elapsed:  00:00:02
  Start:  Mon May 20 17:20:25 2013   End:  Mon May 20 17:20:27 2013

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