BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010529
(508 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 140/291 (48%), Gaps = 28/291 (9%)
Query: 57 FSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTK-VAWPDPTQFKE 115
FS +L+ A++NFS+ NI+ G VYKGRL + +AVK+ + QF+
Sbjct: 28 FSLRELQVASDNFSNKNILGRGG---FGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 116 EAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQT--IEWPLRLRV 173
E E + + L L G+C ERLLV YM N ++A L + ++WP R R+
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 174 AFYIAEALDYCNTEGRP--LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK------SY 225
A A L Y + P ++ D+ A +L DE+ + + FGL K MD K +
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDXHVXXAV 203
Query: 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHI---------PPSHALDMIRG- 275
+ + PEYL G+ ++ ++ +G +LL+L++G+ LD ++G
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 276 ---ENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ L L+D L+G + EE Q++ +A C Q P ERP +V L
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 28/294 (9%)
Query: 54 FSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTK-VAWPDPTQ 112
FS +L+ A++NF + NI+ G VYKGRL + +AVK+ + Q
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGG---FGKVYKGRLADGXLVAVKRLKEERTQGGELQ 73
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQT--IEWPLR 170
F+ E E + + L L G+C ERLLV YM N ++A L + ++WP R
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 133
Query: 171 LRVAFYIAEALDYCNTEGRP--LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----- 223
R+A A L Y + P ++ D+ A +L DE+ + + FGL K MD K
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDXHVX 192
Query: 224 -SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHI---------PPSHALDMI 273
+ + + PEYL G+ ++ ++ +G +LL+L++G+ LD +
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 274 RG----ENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323
+G + L L+D L+G + EE Q++ +A C Q P ERP +V L
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 145/297 (48%), Gaps = 42/297 (14%)
Query: 54 FSEFSFLDLRAATNNFSSDNIV---SESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDP 110
F FSF +L+ TNNF I ++ GE VVYKG + N +AVKK A D
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLA--AMVDI 68
Query: 111 T------QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQ- 163
T QF +E + + K + + L L+G+ GD+ LV YMPN +L L +
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 164 TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS---- 219
+ W +R ++A A +++ + E ++ D+ + +L DE ++S FGL + S
Sbjct: 129 PLSWHMRCKIAQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 220 ---MDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE 276
M + T AY PE L+ G + P+S IYSFG VLL++++G +P A+D R
Sbjct: 188 QTVMXSRIVGTT-AYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREP 240
Query: 277 NLNLLMDS-----------HLEGKFSSEEATQV---VGLASQCLQYEPRERPSTKNL 319
L L + +++ K + ++T V +ASQCL + +RP K +
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 145/297 (48%), Gaps = 42/297 (14%)
Query: 54 FSEFSFLDLRAATNNFSSDNIV---SESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDP 110
F FSF +L+ TNNF I ++ GE VVYKG + N +AVKK A D
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLA--AMVDI 62
Query: 111 T------QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQ- 163
T QF +E + + K + + L L+G+ GD+ LV YMPN +L L +
Sbjct: 63 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 122
Query: 164 TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS---- 219
+ W +R ++A A +++ + E ++ D+ + +L DE ++S FGL + S
Sbjct: 123 PLSWHMRCKIAQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 220 ---MDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE 276
M + T AY PE L+ G + P+S IYSFG VLL++++G +P A+D R
Sbjct: 182 QXVMXXRIVGTT-AYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREP 234
Query: 277 NLNLLMDS-----------HLEGKFSSEEATQV---VGLASQCLQYEPRERPSTKNL 319
L L + +++ K + ++T V +ASQCL + +RP K +
Sbjct: 235 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 145/297 (48%), Gaps = 42/297 (14%)
Query: 54 FSEFSFLDLRAATNNFSSDNIV---SESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDP 110
F FSF +L+ TNNF I ++ GE VVYKG + N +AVKK A D
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLA--AMVDI 68
Query: 111 T------QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQ- 163
T QF +E + + K + + L L+G+ GD+ LV YMPN +L L +
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 164 TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS---- 219
+ W +R ++A A +++ + E ++ D+ + +L DE ++S FGL + S
Sbjct: 129 PLSWHMRCKIAQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 220 ---MDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE 276
M + T AY PE L+ G + P+S IYSFG VLL++++G +P A+D R
Sbjct: 188 QTVMXXRIVGTT-AYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREP 240
Query: 277 NLNLLMDS-----------HLEGKFSSEEATQV---VGLASQCLQYEPRERPSTKNL 319
L L + +++ K + ++T V +ASQCL + +RP K +
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 140/296 (47%), Gaps = 40/296 (13%)
Query: 54 FSEFSFLDLRAATNNFSSDNIV---SESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDP 110
F FSF +L+ TNNF I ++ GE VVYKG + N +AVKK A D
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTT-VAVKKLA--AMVDI 59
Query: 111 T------QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQ- 163
T QF +E + K + + L L+G+ GD+ LV Y PN +L L +
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP 119
Query: 164 TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS---- 219
+ W R ++A A +++ + E ++ D+ + +L DE ++S FGL + S
Sbjct: 120 PLSWHXRCKIAQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 220 --MDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGEN 277
+ AY PE L+ G + P+S IYSFG VLL++++G +P A+D R
Sbjct: 179 QXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQ 232
Query: 278 LNLLMDS-----------HLEGKFSSEEATQV---VGLASQCLQYEPRERPSTKNL 319
L L + +++ K + ++T V +ASQCL + +RP K +
Sbjct: 233 LLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 138/292 (47%), Gaps = 28/292 (9%)
Query: 59 FLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAE 118
+DL ATNNF ++ G VYKG L + +A+K+ T + +F+ E E
Sbjct: 31 LVDLEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 119 GVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQT--IEWPLRLRVAFY 176
+ R L +LIG+C +E +L+ +YM N L +HL+ + T + W RL +
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 177 IAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMD-GKSY-----STNL 229
A L Y +T R + H D+ + +L DE+ P+++ FG+ K + G+++ L
Sbjct: 148 AARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTL 205
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKH-IPPSHALDMI----------RGENL 278
Y PEY GR+ +S +YSFG VL ++L + I S +M+ L
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 279 NLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL---ARLQ 327
++D +L K E + A +CL +RPS +++ L RLQ
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 28/292 (9%)
Query: 59 FLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAE 118
+DL ATNNF ++ G VYKG L + +A+K+ T + +F+ E E
Sbjct: 31 LVDLEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 119 GVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQT--IEWPLRLRVAFY 176
+ R L +LIG+C +E +L+ +YM N L +HL+ + T + W RL +
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 177 IAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMD------GKSYSTNL 229
A L Y +T R + H D+ + +L DE+ P+++ FG+ K + L
Sbjct: 148 AARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKH-IPPSHALDMI----------RGENL 278
Y PEY GR+ +S +YSFG VL ++L + I S +M+ L
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 279 NLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL---ARLQ 327
++D +L K E + A +CL +RPS +++ L RLQ
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 17/230 (7%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLR 172
F E A + KL K L G C GDE +LV E++ +L +L K I +L
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLE 117
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLF--DED---GDP---RLSCFGLMKNSMDGKS 224
VA +A A+ + E ++ ++ A +L +ED G+P +LS G+ +
Sbjct: 118 VAKQLAAAMHFLE-ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 225 YSTNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD 283
+ + PPE ++N + + + +SFGT L ++ SG P S ALD R L D
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALDSQR--KLQFYED 233
Query: 284 SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVP 333
H + + +A ++ L + C+ YEP RPS + ++ L L T VP
Sbjct: 234 RH---QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 17/230 (7%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLR 172
F E A + KL K L G C GDE +LV E++ +L +L K I +L
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKK-NKNCINILWKLE 117
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLF--DED---GDP---RLSCFGLMKNSMDGKS 224
VA +A A+ + E ++ ++ A +L +ED G+P +LS G+ +
Sbjct: 118 VAKQLAWAMHFLE-ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 225 YSTNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD 283
+ + PPE ++N + + + +SFGT L ++ SG P S ALD R L D
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALDSQR--KLQFYED 233
Query: 284 SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVP 333
H + + +A ++ L + C+ YEP RPS + ++ L L T VP
Sbjct: 234 RH---QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 24/263 (9%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI---GYC 135
G + VYKG+ +AVK A P P Q + VG LR+ R N++ GY
Sbjct: 33 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
A + +V ++ +L HL H + E + +A A +DY + + ++ DL
Sbjct: 90 TA-PQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDL 146
Query: 196 NAYRVLFDEDGDPRLSCFGL------MKNSMDGKSYSTNLAYTPPEYLKNGRVIP---ES 246
+ + ED ++ FGL S + S ++ + PE ++ P +S
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSEEATQVVGLAS 303
+Y+FG VL +L++G+ +P S+ + R + + ++ L K S ++ L +
Sbjct: 207 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 263
Query: 304 QCLQYEPRERPSTKNLVVTLARL 326
+CL+ + ERPS ++ + L
Sbjct: 264 ECLKKKRDERPSFPRILAEIEEL 286
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 120/263 (45%), Gaps = 24/263 (9%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI---GYC 135
G + VYKG+ +AVK A P P Q + VG LR+ R N++ GY
Sbjct: 21 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
+ +V ++ +L HL H + E + +A A +DY + + ++ DL
Sbjct: 78 TK-PQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDL 134
Query: 196 NAYRVLFDEDGDPRLSCFGL--MKNSMDG----KSYSTNLAYTPPEYLKNGRVIP---ES 246
+ + ED ++ FGL +K+ G + S ++ + PE ++ P +S
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSEEATQVVGLAS 303
+Y+FG VL +L++G+ +P S+ + R + + ++ L K S ++ L +
Sbjct: 195 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 251
Query: 304 QCLQYEPRERPSTKNLVVTLARL 326
+CL+ + ERPS ++ + L
Sbjct: 252 ECLKKKRDERPSFPRILAEIEEL 274
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 12/259 (4%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
V E G +V+ G N+ +A+K + A + F EEAE + KL +L L
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLY 69
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C LV E+M + L+ +L ++ L + + E + Y E ++
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE-EACVIH 127
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A L E+ ++S FG+ + +D + S+ + + PE R +S
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 248 IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307
++SFG ++ ++ S IP + + E+++ + + + +S T V + + C +
Sbjct: 188 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY-KPRLAS---THVYQIMNHCWR 243
Query: 308 YEPRERPSTKNLVVTLARL 326
P +RP+ L+ LA +
Sbjct: 244 ERPEDRPAFSRLLRQLAEI 262
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 12/259 (4%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
V E G +V+ G N+ +A+K + A + F EEAE + KL +L L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLY 68
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C LV E+M + L+ +L ++ L + + E + Y E ++
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE-EASVIH 126
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A L E+ ++S FG+ + +D + S+ + + PE R +S
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 248 IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307
++SFG ++ ++ S IP + + E+++ + + + +S T V + + C +
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY-KPRLAS---THVYQIMNHCWK 242
Query: 308 YEPRERPSTKNLVVTLARL 326
P +RP+ L+ LA +
Sbjct: 243 ERPEDRPAFSRLLRQLAAI 261
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 12/259 (4%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
V E G +V+ G N+ +A+K + A + F EEAE + KL +L L
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLY 66
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C LV E+M + L+ +L ++ L + + E + Y E ++
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE-EACVIH 124
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A L E+ ++S FG+ + +D + S+ + + PE R +S
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 248 IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307
++SFG ++ ++ S IP + + E+++ + + + +S T V + + C +
Sbjct: 185 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY-KPRLAS---THVYQIMNHCWK 240
Query: 308 YEPRERPSTKNLVVTLARL 326
P +RP+ L+ LA +
Sbjct: 241 ERPEDRPAFSRLLRQLAEI 259
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 12/259 (4%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
V E G +V+ G N+ +A+K + A + F EEAE + KL +L L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLY 68
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C LV E+M + L+ +L ++ L + + E + Y E ++
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE-EACVIH 126
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A L E+ ++S FG+ + +D + S+ + + PE R +S
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 248 IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307
++SFG ++ ++ S IP + + E+++ + + + +S T V + + C +
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY-KPRLAS---THVYQIMNHCWK 242
Query: 308 YEPRERPSTKNLVVTLARL 326
P +RP+ L+ LA +
Sbjct: 243 ERPEDRPAFSRLLRQLAEI 261
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 117/263 (44%), Gaps = 24/263 (9%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI---GYC 135
G + VYKG+ +AVK A P P Q + VG LR+ R N++ GY
Sbjct: 33 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
+ +V ++ +L HL H + E + +A A +DY + + ++ DL
Sbjct: 90 TK-PQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDL 146
Query: 196 NAYRVLFDEDGDPRLSCFGL------MKNSMDGKSYSTNLAYTPPEYLKNGRVIP---ES 246
+ + ED ++ FGL S + S ++ + PE ++ P +S
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSEEATQVVGLAS 303
+Y+FG VL +L++G+ +P S+ + R + + ++ L K S ++ L +
Sbjct: 207 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 263
Query: 304 QCLQYEPRERPSTKNLVVTLARL 326
+CL+ + ERPS ++ + L
Sbjct: 264 ECLKKKRDERPSFPRILAEIEEL 286
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 12/259 (4%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
V E G +V+ G N+ +A+K + A + F EEAE + KL +L L
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLY 71
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C LV E+M + L+ +L ++ L + + E + Y E ++
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE-EACVIH 129
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A L E+ ++S FG+ + +D + S+ + + PE R +S
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 248 IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307
++SFG ++ ++ S IP + + E+++ + + + +S T V + + C +
Sbjct: 190 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY-KPRLAS---THVYQIMNHCWR 245
Query: 308 YEPRERPSTKNLVVTLARL 326
P +RP+ L+ LA +
Sbjct: 246 ERPEDRPAFSRLLRQLAEI 264
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 116/257 (45%), Gaps = 20/257 (7%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
+ E G VV G+ + +A+K + + + +F EEA+ + L ++L L
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 69
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C ++ EYM N L +L + + L + + EA++Y ++ + L+
Sbjct: 70 GVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLH 127
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA------YTPPEYLKNGRVIPES 246
DL A L ++ G ++S FGL + +D + Y++++ ++PPE L + +S
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNL---LMDSHLEGKFSSEEATQVVGLAS 303
I++FG ++ ++ S +P + E++ L HL + +V +
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL-------ASEKVYTIMY 239
Query: 304 QCLQYEPRERPSTKNLV 320
C + ERP+ K L+
Sbjct: 240 SCWHEKADERPTFKILL 256
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 18/256 (7%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
+ E G VV G+ + +A+K + + + +F EEA+ + L ++L L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 70
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C ++ EYM N L +L + + L + + EA++Y ++ + L+
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLH 128
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A L ++ G ++S FGL + +D + S+ + ++PPE L + +S
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 248 IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNL---LMDSHLEGKFSSEEATQVVGLASQ 304
I++FG ++ ++ S +P + E++ L HL + +V +
Sbjct: 189 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL-------ASEKVYTIMYS 241
Query: 305 CLQYEPRERPSTKNLV 320
C + ERP+ K L+
Sbjct: 242 CWHEKADERPTFKILL 257
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 116/257 (45%), Gaps = 20/257 (7%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
+ E G VV G+ + +A+K + + + +F EEA+ + L ++L L
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 65
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C ++ EYM N L +L + + L + + EA++Y ++ + L+
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLH 123
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA------YTPPEYLKNGRVIPES 246
DL A L ++ G ++S FGL + +D + Y++++ ++PPE L + +S
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNL---LMDSHLEGKFSSEEATQVVGLAS 303
I++FG ++ ++ S +P + E++ L HL + +V +
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL-------ASEKVYTIMY 235
Query: 304 QCLQYEPRERPSTKNLV 320
C + ERP+ K L+
Sbjct: 236 SCWHEKADERPTFKILL 252
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 12/259 (4%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
V E G +V+ G N+ +A+K + + + F EEAE + KL +L L
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLY 88
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C LV E+M + L+ +L ++ L + + E + Y E ++
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE-EACVIH 146
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A L E+ ++S FG+ + +D + S+ + + PE R +S
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 248 IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307
++SFG ++ ++ S IP + + E+++ + + + +S T V + + C +
Sbjct: 207 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY-KPRLAS---THVYQIMNHCWK 262
Query: 308 YEPRERPSTKNLVVTLARL 326
P +RP+ L+ LA +
Sbjct: 263 ERPEDRPAFSRLLRQLAEI 281
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 18/259 (6%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
+ E G VV G+ + +A+K + + + +F EEA+ + L ++L L
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 85
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C ++ EYM N L +L + + L + + EA++Y ++ + L+
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLH 143
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A L ++ G ++S FGL + +D + S+ + ++PPE L + +S
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 248 IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNL---LMDSHLEGKFSSEEATQVVGLASQ 304
I++FG ++ ++ S +P + E++ L HL + +V +
Sbjct: 204 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL-------ASEKVYTIMYS 256
Query: 305 CLQYEPRERPSTKNLVVTL 323
C + ERP+ K L+ +
Sbjct: 257 CWHEKADERPTFKILLSNI 275
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 116/257 (45%), Gaps = 20/257 (7%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
+ E G VV G+ + +A+K + + + +F EEA+ + L ++L L
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 76
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C ++ EYM N L +L + + L + + EA++Y ++ + L+
Sbjct: 77 GVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLH 134
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA------YTPPEYLKNGRVIPES 246
DL A L ++ G ++S FGL + +D + Y++++ ++PPE L + +S
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNL---LMDSHLEGKFSSEEATQVVGLAS 303
I++FG ++ ++ S +P + E++ L HL + +V +
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL-------ASEKVYTIMY 246
Query: 304 QCLQYEPRERPSTKNLV 320
C + ERP+ K L+
Sbjct: 247 SCWHEKADERPTFKILL 263
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 116/257 (45%), Gaps = 20/257 (7%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
+ E G VV G+ + +A+K + + + +F EEA+ + L ++L L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 70
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C ++ EYM N L +L + + L + + EA++Y ++ + L+
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLH 128
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA------YTPPEYLKNGRVIPES 246
DL A L ++ G ++S FGL + +D + Y++++ ++PPE L + +S
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNL---LMDSHLEGKFSSEEATQVVGLAS 303
I++FG ++ ++ S +P + E++ L HL + +V +
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL-------ASEKVYTIMY 240
Query: 304 QCLQYEPRERPSTKNLV 320
C + ERP+ K L+
Sbjct: 241 SCWHEKADERPTFKILL 257
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 117/260 (45%), Gaps = 20/260 (7%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
+ E G VV G+ + +A+K + + + +F EEA+ + L ++L L
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 85
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C ++ EYM N L +L + + L + + EA++Y ++ + L+
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLH 143
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA------YTPPEYLKNGRVIPES 246
DL A L ++ G ++S FGL + +D + Y++++ ++PPE L + +S
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNL---LMDSHLEGKFSSEEATQVVGLAS 303
I++FG ++ ++ S +P + E++ L HL + +V +
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL-------ASEKVYTIMY 255
Query: 304 QCLQYEPRERPSTKNLVVTL 323
C + ERP+ K L+ +
Sbjct: 256 SCWHEKADERPTFKILLSNI 275
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 122/263 (46%), Gaps = 24/263 (9%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI---GYC 135
G + VYKG+ +AVK A P P Q + VG LR+ R N++ GY
Sbjct: 17 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
A + +V ++ +L HL H + E + +A A+ +DY + + ++ DL
Sbjct: 74 TA-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 130
Query: 196 NAYRVLFDEDGDPRLSCFGL--MKNSMDG----KSYSTNLAYTPPEYLKNGRVIP---ES 246
+ + ED ++ FGL +K+ G + S ++ + PE ++ P +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSEEATQVVGLAS 303
+Y+FG VL +L++G+ +P S+ + R + + ++ +L K S + L +
Sbjct: 191 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 247
Query: 304 QCLQYEPRERPSTKNLVVTLARL 326
+CL+ + ERP ++ ++ L
Sbjct: 248 ECLKKKRDERPLFPQILASIELL 270
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 21/221 (9%)
Query: 109 DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWP 168
D + K E E + LR + + L ++ +V EY P L ++ ++ + E
Sbjct: 51 DLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE-- 108
Query: 169 LRLRVAF-YIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSY-- 225
RV F I A+ Y +++G + DL +LFDE +L FGL K Y
Sbjct: 109 -ETRVVFRQIVSAVAYVHSQGYA-HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL 166
Query: 226 ---STNLAYTPPEYLKNGRVI-PESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLL 281
+LAY PE ++ + E+ ++S G +L L+ G +P +N+ L
Sbjct: 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG-FLP-------FDDDNVMAL 218
Query: 282 MDSHLEGKFSSEE--ATQVVGLASQCLQYEPRERPSTKNLV 320
+ GK+ + + + L Q LQ +P++R S KNL+
Sbjct: 219 YKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI---GYC 135
G + VYKG+ +AVK KV P P QF+ V LR+ R N++ GY
Sbjct: 45 GSGSFGTVYKGKWHGD--VAVK-ILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
D +V ++ +L KHL H ++ + + +A A+ +DY + + ++ D+
Sbjct: 102 TK-DNLAIVTQWCEGSSLYKHL-HVQETKFQMFQLIDIARQTAQGMDYLHAK-NIIHRDM 158
Query: 196 NAYRVLFDEDGDPRLSCFGL--MKNSMDGKSY----STNLAYTPPEYLK---NGRVIPES 246
+ + E ++ FGL +K+ G + ++ + PE ++ N +S
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 247 VIYSFGTVLLDLLSGKHIPPSH 268
+YS+G VL +L++G+ +P SH
Sbjct: 219 DVYSYGIVLYELMTGE-LPYSH 239
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 24/263 (9%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI---GYC 135
G + VYKG+ +AVK A P P Q + VG LR+ R N++ GY
Sbjct: 44 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
+ +V ++ +L HL H + E + +A A+ +DY + + ++ DL
Sbjct: 101 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 157
Query: 196 NAYRVLFDEDGDPRLSCFGL--MKNSMDG----KSYSTNLAYTPPEYLKNGRVIP---ES 246
+ + ED ++ FGL +K+ G + S ++ + PE ++ P +S
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 217
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSEEATQVVGLAS 303
+Y+FG VL +L++G+ +P S+ + R + + ++ +L K S + L +
Sbjct: 218 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 274
Query: 304 QCLQYEPRERPSTKNLVVTLARL 326
+CL+ + ERP ++ ++ L
Sbjct: 275 ECLKKKRDERPLFPQILASIELL 297
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 24/263 (9%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI---GYC 135
G + VYKG+ +AVK A P P Q + VG LR+ R N++ GY
Sbjct: 45 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
+ +V ++ +L HL H + E + +A A+ +DY + + ++ DL
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 158
Query: 196 NAYRVLFDEDGDPRLSCFGL--MKNSMDG----KSYSTNLAYTPPEYLKNGRVIP---ES 246
+ + ED ++ FGL +K+ G + S ++ + PE ++ P +S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSEEATQVVGLAS 303
+Y+FG VL +L++G+ +P S+ + R + + ++ +L K S + L +
Sbjct: 219 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 275
Query: 304 QCLQYEPRERPSTKNLVVTLARL 326
+CL+ + ERP ++ ++ L
Sbjct: 276 ECLKKKRDERPLFPQILASIELL 298
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 24/263 (9%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI---GYC 135
G + VYKG+ +AVK A P P Q + VG LR+ R N++ GY
Sbjct: 22 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
+ +V ++ +L HL H + E + +A A+ +DY + + ++ DL
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 135
Query: 196 NAYRVLFDEDGDPRLSCFGL--MKNSMDG----KSYSTNLAYTPPEYLKNGRVIP---ES 246
+ + ED ++ FGL +K+ G + S ++ + PE ++ P +S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSEEATQVVGLAS 303
+Y+FG VL +L++G+ +P S+ + R + + ++ +L K S + L +
Sbjct: 196 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 252
Query: 304 QCLQYEPRERPSTKNLVVTLARL 326
+CL+ + ERP ++ ++ L
Sbjct: 253 ECLKKKRDERPLFPQILASIELL 275
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 24/263 (9%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI---GYC 135
G + VYKG+ +AVK A P P Q + VG LR+ R N++ GY
Sbjct: 19 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
+ +V ++ +L HL H + E + +A A+ +DY + + ++ DL
Sbjct: 76 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 132
Query: 196 NAYRVLFDEDGDPRLSCFGL--MKNSMDG----KSYSTNLAYTPPEYLKNGRVIP---ES 246
+ + ED ++ FGL +K+ G + S ++ + PE ++ P +S
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 192
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSEEATQVVGLAS 303
+Y+FG VL +L++G+ +P S+ + R + + ++ +L K S + L +
Sbjct: 193 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 249
Query: 304 QCLQYEPRERPSTKNLVVTLARL 326
+CL+ + ERP ++ ++ L
Sbjct: 250 ECLKKKRDERPLFPQILASIELL 272
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 24/263 (9%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI---GYC 135
G + VYKG+ +AVK A P P Q + VG LR+ R N++ GY
Sbjct: 22 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
+ +V ++ +L HL H + E + +A A+ +DY + + ++ DL
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 135
Query: 196 NAYRVLFDEDGDPRLSCFGL--MKNSMDG----KSYSTNLAYTPPEYLKNGRVIP---ES 246
+ + ED ++ FGL +K+ G + S ++ + PE ++ P +S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSEEATQVVGLAS 303
+Y+FG VL +L++G+ +P S+ + R + + ++ +L K S + L +
Sbjct: 196 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 252
Query: 304 QCLQYEPRERPSTKNLVVTLARL 326
+CL+ + ERP ++ ++ L
Sbjct: 253 ECLKKKRDERPLFPQILASIELL 275
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 24/263 (9%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI---GYC 135
G + VYKG+ +AVK A P P Q + VG LR+ R N++ GY
Sbjct: 17 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
+ +V ++ +L HL H + E + +A A+ +DY + + ++ DL
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 130
Query: 196 NAYRVLFDEDGDPRLSCFGL--MKNSMDG----KSYSTNLAYTPPEYLKNGRVIP---ES 246
+ + ED ++ FGL +K+ G + S ++ + PE ++ P +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSEEATQVVGLAS 303
+Y+FG VL +L++G+ +P S+ + R + + ++ +L K S + L +
Sbjct: 191 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 247
Query: 304 QCLQYEPRERPSTKNLVVTLARL 326
+CL+ + ERP ++ ++ L
Sbjct: 248 ECLKKKRDERPLFPQILASIELL 270
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
F EA + +LR L L+G L +V EYM +L +L + + L
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105
Query: 172 RVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-SYSTNL 229
+ + + EA++Y EG H DL A VL ED ++S FGL K + + + +
Sbjct: 106 KFSLDVCEAMEY--LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 163
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP 265
+T PE L+ + +S ++SFG +L ++ S +P
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
F EA + +LR L L+G L +V EYM +L +L + + L
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 120
Query: 172 RVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-SYSTNL 229
+ + + EA++Y EG H DL A VL ED ++S FGL K + + + +
Sbjct: 121 KFSLDVCEAMEYL--EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 178
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP 265
+T PE L+ + +S ++SFG +L ++ S +P
Sbjct: 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
F EA + +LR L L+G L +V EYM +L +L + + L
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 292
Query: 172 RVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-SYSTNL 229
+ + + EA++Y EG H DL A VL ED ++S FGL K + + + +
Sbjct: 293 KFSLDVCEAMEY--LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 350
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP 265
+T PE L+ + +S ++SFG +L ++ S +P
Sbjct: 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 17 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 73
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 132
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 133 ANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 192
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + EP E
Sbjct: 193 ILLTELTTKGRVPYP---GMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKEPEE 248
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 249 RPTFEYL 255
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 24/263 (9%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI---GYC 135
G + VYKG+ +AVK A P P Q + VG LR+ R N++ GY
Sbjct: 45 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
+ +V ++ +L HL H + E + +A A+ +DY + + ++ DL
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 158
Query: 196 NAYRVLFDEDGDPRLSCFGL------MKNSMDGKSYSTNLAYTPPEYLKNGRVIP---ES 246
+ + ED ++ FGL S + S ++ + PE ++ P +S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSEEATQVVGLAS 303
+Y+FG VL +L++G+ +P S+ + R + + ++ +L K S + L +
Sbjct: 219 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 275
Query: 304 QCLQYEPRERPSTKNLVVTLARL 326
+CL+ + ERP ++ ++ L
Sbjct: 276 ECLKKKRDERPLFPQILASIELL 298
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 24/263 (9%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI---GYC 135
G + VYKG+ +AVK A P P Q + VG LR+ R N++ GY
Sbjct: 37 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
+ +V ++ +L HL H + E + +A A+ +DY + + ++ DL
Sbjct: 94 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 150
Query: 196 NAYRVLFDEDGDPRLSCFGL------MKNSMDGKSYSTNLAYTPPEYLKNGRVIP---ES 246
+ + ED ++ FGL S + S ++ + PE ++ P +S
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 210
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSEEATQVVGLAS 303
+Y+FG VL +L++G+ +P S+ + R + + ++ +L K S + L +
Sbjct: 211 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 267
Query: 304 QCLQYEPRERPSTKNLVVTLARL 326
+CL+ + ERP ++ ++ L
Sbjct: 268 ECLKKKRDERPLFPQILASIELL 290
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C +V EYMP L +L ++ + + L
Sbjct: 74 EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLL 133
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+ +
Sbjct: 134 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHVVKVADFGLSR-LMTGDTYTAHAGA 191
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L +S +++FG +L ++ + + P +D+ + +L
Sbjct: 192 KFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYDL------- 243
Query: 286 LEGKFSSEEAT----QVVGLASQCLQYEPRERPS 315
LE + E+ +V L C ++ P +RPS
Sbjct: 244 LEKGYRMEQPEGCPPKVYELMRACWKWSPADRPS 277
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 249
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 308
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 309 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + EP E
Sbjct: 369 ILLTELTTKGRVPYP---GMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKEPEE 424
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 425 RPTFEYL 431
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 24/263 (9%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI---GYC 135
G + VYKG+ +AVK A P P Q + VG LR+ R N++ GY
Sbjct: 17 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
+ +V ++ +L HL H + E + +A A+ +DY + + ++ DL
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 130
Query: 196 NAYRVLFDEDGDPRLSCFGL------MKNSMDGKSYSTNLAYTPPEYLKNGRVIP---ES 246
+ + ED ++ FGL S + S ++ + PE ++ P +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSEEATQVVGLAS 303
+Y+FG VL +L++G+ +P S+ + R + + ++ +L K S + L +
Sbjct: 191 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 247
Query: 304 QCLQYEPRERPSTKNLVVTLARL 326
+CL+ + ERP ++ ++ L
Sbjct: 248 ECLKKKRDERPLFPQILASIELL 270
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+ +
Sbjct: 120 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 177
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 235
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 236 MERPEGCPE--KVYELMRACWQWNPSDRPS 263
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 249
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 308
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 309 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + EP E
Sbjct: 369 ILLTELTTKGRVPYP---GMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKEPEE 424
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 425 RPTFEYL 431
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+ +
Sbjct: 120 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 177
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 235
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 236 MERPEGCPE--KVYELMRACWQWNPSDRPS 263
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 249
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 308
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 309 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + EP E
Sbjct: 369 ILLTELTTKGRVPYP---GMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKEPEE 424
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 425 RPTFEYL 431
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 119
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+ +
Sbjct: 120 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 177
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 235
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 236 MERPEGCPE--KVYELMRACWQWNPSDRPS 263
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 59 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 118
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+ +
Sbjct: 119 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 176
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 177 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 234
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 235 MERPEGCPE--KVYELMRACWQWNPSDRPS 262
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 20 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 76
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 135
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 136 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 195
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + EP E
Sbjct: 196 ILLTELTTKGRVPYP---GMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKEPEE 251
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 252 RPTFEYL 258
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
F EA + +LR L L+G L +V EYM +L +L + + L
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 111
Query: 172 RVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-SYSTNL 229
+ + + EA++Y EG H DL A VL ED ++S FGL K + + + +
Sbjct: 112 KFSLDVCEAMEY--LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 169
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP 265
+T PE L+ +S ++SFG +L ++ S +P
Sbjct: 170 KWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+ +
Sbjct: 117 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 174
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 232
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 233 MERPEGCPE--KVYELMRACWQWNPSDRPS 260
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+ +
Sbjct: 115 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 172
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 230
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 231 MERPEGCPE--KVYELMRACWQWNPSDRPS 258
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 114
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+ +
Sbjct: 115 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 172
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 230
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 231 MERPEGCPE--KVYELMRACWQWNPSDRPS 258
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 114
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+ +
Sbjct: 115 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 172
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 230
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 231 MERPEGCPE--KVYELMRACWQWNPSDRPS 258
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+ +
Sbjct: 117 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 174
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 232
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 233 MERPEGCPE--KVYELMRACWQWNPSDRPS 260
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+ +
Sbjct: 120 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 177
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 235
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 236 MERPEGCPE--KVYELMRACWQWNPSDRPS 263
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+ +
Sbjct: 115 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 172
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 230
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 231 MERPEGCPE--KVYELMRACWQWNPSDRPS 258
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 68 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 127
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+ +
Sbjct: 128 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 185
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 186 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 243
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 244 MERPEGCPE--KVYELMRACWQWNPSDRPS 271
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 276 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 332
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 391
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 392 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 451
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + EP E
Sbjct: 452 ILLTELTTKGRVP---YPGMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKEPEE 507
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 508 RPTFEYL 514
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+ +
Sbjct: 115 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 172
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 230
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 231 MERPEGCPE--KVYELMRACWQWNPSDRPS 258
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+ +
Sbjct: 115 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 172
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 230
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 231 MERPEGCPE--KVYELMRACWQWNPSDRPS 258
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 109
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + + S
Sbjct: 110 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS 168
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 169 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 221
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 222 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 270
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 107/251 (42%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ EY+P +L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+L K+ I+ L+ I + ++Y T+ R ++ DL +L + + ++ FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K + + + + PE L + S ++SFG VL +L +
Sbjct: 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 280 RDLALRVDQIR 290
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 56 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 115
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST---- 227
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+
Sbjct: 116 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGA 173
Query: 228 --NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 231
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 232 MERPEGCPE--KVYELMRACWQWNPSDRPS 259
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST---- 227
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +Y+
Sbjct: 117 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGA 174
Query: 228 --NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 232
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 233 MERPEGCPE--KVYELMRACWQWNPSDRPS 260
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 107/251 (42%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ EY+P +L
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+L K+ I+ L+ I + ++Y T+ R ++ +L +L + + ++ FG
Sbjct: 103 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRNLATRNILVENENRVKIGDFG 160
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K Y + + + PE L + S ++SFG VL +L +
Sbjct: 161 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 220
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 221 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 280
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 281 RDLALRVDQIR 291
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 142
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + +P E
Sbjct: 203 ILLTELTTKGRVPYP---GMVNREVLDQV-ERGYRMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 259 RPTFEYL 265
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 142
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + +P E
Sbjct: 203 ILLTELTTKGRVPYP---GMVNREVLDQV-ERGYRMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 259 RPTFEYL 265
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 110
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 111 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC 169
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 170 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 222
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 223 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 271
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 18 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 74
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 133
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 134 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 193
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + +P E
Sbjct: 194 ILLTELTTKGRVPYP---GMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKDPEE 249
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 250 RPTFEYL 256
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 24 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 80
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + ++ IA + Y ++ DL A
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY-VHRDLRA 139
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 140 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 199
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + EP E
Sbjct: 200 ILLTELTTKGRVPYP---GMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKEPEE 255
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 256 RPTFEYL 262
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 16 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 72
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 131
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 132 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 191
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + +P E
Sbjct: 192 ILLTELTTKGRVPYP---GMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKDPEE 247
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 248 RPTFEYL 254
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 142
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + +P E
Sbjct: 203 ILLTELTTKGRVPYP---GMVNREVLDQV-ERGYRMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 259 RPTFEYL 265
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 125
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 126 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 184
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 185 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 237
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 238 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 286
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 24 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 80
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + ++ IA + Y ++ DL A
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY-VHRDLRA 139
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 140 ANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 199
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + EP E
Sbjct: 200 ILLTELTTKGRVPYP---GMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKEPEE 255
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 256 RPTFEYL 262
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 109
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 110 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC 168
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 169 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 221
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 222 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 270
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 111
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 112 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC 170
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 171 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 223
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 224 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 272
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 22/246 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 112
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G +++ +
Sbjct: 113 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTFTAHAGA 170
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-----PSHALDMIRGENLNL 280
+ +T PE L + +S +++FG +L ++ + P PS +++
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK----- 225
Query: 281 LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRV 340
D +E E +V L C Q+ P +RPS + + +S + V +
Sbjct: 226 --DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 281
Query: 341 SKHEEA 346
K E
Sbjct: 282 GKRGEG 287
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P + K L Q +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQ 113
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 114 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 172
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 173 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 225
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 226 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 274
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 111
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 112 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 170
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 171 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 223
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 224 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 272
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 113
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 114 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 172
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 173 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 225
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 226 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 274
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLAA 142
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + +P E
Sbjct: 203 ILLTELTTKGRVPYP---GMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 259 RPTFEYL 265
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 142
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + +P E
Sbjct: 203 ILLTELTTKGRVPYP---GMVNREVLDQV-ERGYRMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 259 RPTFEYL 265
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM L L + + P + +A IA + Y ++ DL A
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 142
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + +P E
Sbjct: 203 ILLTELTTKGRVPYP---GMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 259 RPTFEYL 265
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 134
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 135 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 193
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 194 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 246
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 247 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 295
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 262 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 321
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ +L A L E+ +++ FGL + M G +Y+ +
Sbjct: 322 YMATQISSAMEYLEKKNF-IHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 379
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 437
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 438 MERPEGCPE--KVYELMRACWQWNPSDRPS 465
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 108
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 109 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 167
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 168 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 220
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 221 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 269
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ EY+P +L
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+L K+ I+ L+ I + ++Y T+ R ++ DL +L + + ++ FG
Sbjct: 108 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 165
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K + + + PE L + S ++SFG VL +L +
Sbjct: 166 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 225
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 226 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 285
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 286 RDLALRVDQIR 296
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ EY+P +L
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+L K+ I+ L+ I + ++Y T+ R ++ DL +L + + ++ FG
Sbjct: 107 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 164
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K + + + PE L + S ++SFG VL +L +
Sbjct: 165 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 224
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 225 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 284
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 285 RDLALRVDQIR 295
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 111
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 112 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC 170
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 171 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 223
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 224 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 272
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ EY+P +L
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+L K+ I+ L+ I + ++Y T+ R ++ DL +L + + ++ FG
Sbjct: 133 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 190
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K + + + PE L + S ++SFG VL +L +
Sbjct: 191 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 251 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 310
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 311 RDLALRVDQIR 321
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 301 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 360
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ +L A L E+ +++ FGL + M G +Y+ +
Sbjct: 361 YMATQISSAMEYLEKKNF-IHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 418
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 419 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 476
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 477 MERPEGCPE--KVYELMRACWQWNPSDRPS 504
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ EY+P +L
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+L K+ I+ L+ I + ++Y T+ R ++ DL +L + + ++ FG
Sbjct: 109 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 166
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K + + + PE L + S ++SFG VL +L +
Sbjct: 167 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 226
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 227 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 286
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 287 RDLALRVDQIR 297
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM L L + + P + +A IA + Y ++ DL A
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 142
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + +P E
Sbjct: 203 ILLTELTTKGRVPYP---GMVNREVLDQV-ERGYRMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 259 RPTFEYL 265
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + K+R ++L L Y
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQL--YAVVS 83
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 142
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + +P E
Sbjct: 203 ILLTELTTKGRVPYP---GMVNREVLDQV-ERGYRMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 259 RPTFEYL 265
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ EY+P +L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+L K+ I+ L+ I + ++Y T+ R ++ DL +L + + ++ FG
Sbjct: 105 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K + + + PE L + S ++SFG VL +L +
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 223 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 283 RDLALRVDQIR 293
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ EY+P +L
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+L K+ I+ L+ I + ++Y T+ R ++ DL +L + + ++ FG
Sbjct: 106 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 163
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K + + + PE L + S ++SFG VL +L +
Sbjct: 164 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 223
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 224 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 283
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 284 RDLALRVDQIR 294
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 259 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 318
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ +L A L E+ +++ FGL + M G +Y+ +
Sbjct: 319 YMATQISSAMEYLEKKNF-IHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 376
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 377 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 434
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 435 MERPEGCPE--KVYELMRACWQWNPSDRPS 462
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ EY+P +L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+L K+ I+ L+ I + ++Y T+ R ++ DL +L + + ++ FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K + + + PE L + S ++SFG VL +L +
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 280 RDLALRVDQIR 290
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 113
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 114 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 172
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR E V ++S G + + L GK PP A E + S
Sbjct: 173 GTLDYLPPEXIE-GRXHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 225
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 226 VEFTFPDFVTEGARDLISRLLKHNPSQRPXLRE-VLEHPWITANSSKPSN 274
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 194 GQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 250
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 309
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 310 ANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 369
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + +P E
Sbjct: 370 ILLTELTTKGRVPYP---GMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKDPEE 425
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 426 RPTFEYL 432
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ EY+P +L
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+L K+ I+ L+ I + ++Y T+ R ++ DL +L + + ++ FG
Sbjct: 101 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 158
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K + + + PE L + S ++SFG VL +L +
Sbjct: 159 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 218
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 219 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 278
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 279 RDLALRVDQIR 289
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP--- 233
I + LDY ++E R ++ D+ A VL E GD +L+ FG+ D + TP
Sbjct: 125 ILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWM 183
Query: 234 -PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSS 292
PE +K ++ I+S G ++L G+ PP+ L +R + L+ +
Sbjct: 184 APEVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDLHPMR---VLFLIPKNSPPTLEG 238
Query: 293 EEATQVVGLASQCLQYEPRERPSTKNLV 320
+ + CL +PR RP+ K L+
Sbjct: 239 QHSKPFKEFVEACLNKDPRFRPTAKELL 266
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 109
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 110 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC 168
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 169 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 221
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 222 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 270
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ EY+P +L
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+L K+ I+ L+ I + ++Y T+ R ++ DL +L + + ++ FG
Sbjct: 100 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 157
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K + + + PE L + S ++SFG VL +L +
Sbjct: 158 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 217
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 218 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 277
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 278 RDLALRVDQIR 288
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 108
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 109 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC 167
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 168 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 220
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 221 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 269
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 26/254 (10%)
Query: 97 IAVKKFTKVAWPDP-TQFKEEAEGVGKLRRKRLANLIGYCC--AGDERL-LVAEYMPNDT 152
+AVK P + +K+E + + L + + G CC G++ L LV EY+P +
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKG-CCEDQGEKSLQLVMEYVPLGS 104
Query: 153 LAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC 212
L +L + +I L A I E + Y +++ ++ +L A VL D D ++
Sbjct: 105 LRDYL---PRHSIGLAQLLLFAQQICEGMAYLHSQ-HYIHRNLAARNVLLDNDRLVKIGD 160
Query: 213 FGLMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GK 262
FGL K +G Y + + + PE LK + S ++SFG L +LL+
Sbjct: 161 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSS 220
Query: 263 HIPPSHALDMI---RGENLNLLMDSHLEGK----FSSEEATQVVGLASQCLQYEPRERPS 315
PP+ L++I +G+ L + LE + +V L C + E RP+
Sbjct: 221 QSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPT 280
Query: 316 TKNLVVTLARLQTK 329
+NL+ L + K
Sbjct: 281 FENLIPILKTVHEK 294
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 113
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 114 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC 172
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 173 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 225
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 226 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 274
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ EY+P +L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+L K+ I+ L+ I + ++Y T+ R ++ DL +L + + ++ FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K + + + PE L + S ++SFG VL +L +
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 280 RDLALRVDQIR 290
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P + K L Q +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQ 113
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 114 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX 172
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 173 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 225
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 226 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 274
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G + + +
Sbjct: 120 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGA 177
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 235
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 236 MERPEGCPE--KVYELMRACWQWNPSDRPS 263
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 134
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 135 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC 193
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 194 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 246
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 247 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 295
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 110
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 111 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC 169
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 170 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 222
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 223 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 271
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 110/254 (43%), Gaps = 26/254 (10%)
Query: 97 IAVKKFTKVAWPDP-TQFKEEAEGVGKLRRKRLANLIGYCC--AGDERL-LVAEYMPNDT 152
+AVK A P + +K+E + + L + + G CC AG L LV EY+P +
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKG-CCEDAGAASLQLVMEYVPLGS 121
Query: 153 LAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC 212
L +L + +I L A I E + Y + + ++ DL A VL D D ++
Sbjct: 122 LRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLLDNDRLVKIGD 177
Query: 213 FGLMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GK 262
FGL K +G + + + PE LK + S ++SFG L +LL+
Sbjct: 178 FGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSS 237
Query: 263 HIPPSHALDMI---RGENLNLLMDSHLEGK----FSSEEATQVVGLASQCLQYEPRERPS 315
PP+ L++I +G+ L + LE + +V L C + E RP+
Sbjct: 238 QSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPT 297
Query: 316 TKNLVVTLARLQTK 329
+NL+ L + K
Sbjct: 298 FENLIPILKTVHEK 311
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 108
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 109 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC 167
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 168 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 220
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 221 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 269
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 108/252 (42%), Gaps = 23/252 (9%)
Query: 79 GEKAANVVYKGRLENRQWI-AVKKFTKVAWPDPT---QFKEEAEGVGKLRRKRLANLIGY 134
G+ VY R + R++I A+K K Q + E E LR + L GY
Sbjct: 14 GKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 73
Query: 135 CCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPL 191
L+ EY P T+ + L Q + R A YI E AL YC+++ R +
Sbjct: 74 FHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSK-RVI 127
Query: 192 YHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYSTNLAYTPPEYLKNGRVIPESV-I 248
+ D+ +L G+ +++ FG ++ + + L Y PPE ++ GR+ E V +
Sbjct: 128 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIE-GRMHDEKVDL 186
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+S G + + L GK PP A E + S +E F L S+ L++
Sbjct: 187 WSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKH 240
Query: 309 EPRERPSTKNLV 320
P +RP + ++
Sbjct: 241 NPSQRPMLREVL 252
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ EY+P +L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+L K+ I+ L+ I + ++Y T+ R ++ DL +L + + ++ FG
Sbjct: 120 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 177
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K + + + PE L + S ++SFG VL +L +
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 237
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 238 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 297
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 298 RDLALRVDQIR 308
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 20/230 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 108
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 109 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC 167
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 168 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 220
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+E F L S+ L++ P +RP + V+ + S PSN
Sbjct: 221 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE-VLEHPWITANSSKPSN 269
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 24/257 (9%)
Query: 80 EKAANVVYKGRLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
E A + KG E R +AVK + A + +F EA + + L+G G
Sbjct: 35 EGNARDIIKGEAETR--VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 92
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR--------LRVAFYIAEALDYCNTEGRP 190
L+V E M + L +L + P R +++A IA+ + Y N + +
Sbjct: 93 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KF 151
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIP 244
++ DL A + D ++ FG+ ++ + Y + + PE LK+G
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTT 211
Query: 245 ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD-SHLEGKFSSEEATQVVGLAS 303
S ++SFG VL ++ S P + + L +MD +L+ + E +V L
Sbjct: 212 SSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDGGYLDQPDNCPE--RVTDLMR 266
Query: 304 QCLQYEPRERPSTKNLV 320
C Q+ P+ RP+ +V
Sbjct: 267 MCWQFNPKMRPTFLEIV 283
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 24/257 (9%)
Query: 80 EKAANVVYKGRLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
E A + KG E R +AVK + A + +F EA + + L+G G
Sbjct: 35 EGNARDIIKGEAETR--VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 92
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR--------LRVAFYIAEALDYCNTEGRP 190
L+V E M + L +L + P R +++A IA+ + Y N + +
Sbjct: 93 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KF 151
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIP 244
++ DL A + D ++ FG+ ++ + Y + + PE LK+G
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTT 211
Query: 245 ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD-SHLEGKFSSEEATQVVGLAS 303
S ++SFG VL ++ S P + + L +MD +L+ + E +V L
Sbjct: 212 SSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDGGYLDQPDNCPE--RVTDLMR 266
Query: 304 QCLQYEPRERPSTKNLV 320
C Q+ P+ RP+ +V
Sbjct: 267 MCWQFNPKMRPTFLEIV 283
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ EY+P +L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+L K+ I+ L+ I + ++Y T+ R ++ DL +L + + ++ FG
Sbjct: 120 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 177
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K + + + PE L + S ++SFG VL +L +
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 237
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 238 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 297
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 298 RDLALRVDQIR 308
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 26/254 (10%)
Query: 97 IAVKKFTKVAWPDP-TQFKEEAEGVGKLRRKRLANLIGYCC--AGDERL-LVAEYMPNDT 152
+AVK P + +K+E + + L + + G CC G++ L LV EY+P +
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKG-CCEDQGEKSLQLVMEYVPLGS 104
Query: 153 LAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC 212
L +L + +I L A I E + Y + + ++ +L A VL D D ++
Sbjct: 105 LRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRNLAARNVLLDNDRLVKIGD 160
Query: 213 FGLMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GK 262
FGL K +G Y + + + PE LK + S ++SFG L +LL+
Sbjct: 161 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSS 220
Query: 263 HIPPSHALDMI---RGENLNLLMDSHLEGK----FSSEEATQVVGLASQCLQYEPRERPS 315
PP+ L++I +G+ L + LE + +V L C + E RP+
Sbjct: 221 QSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPT 280
Query: 316 TKNLVVTLARLQTK 329
+NL+ L + K
Sbjct: 281 FENLIPILKTVHEK 294
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 24/260 (9%)
Query: 80 EKAANVVYKGRLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
E A + KG E R +AVK + A + +F EA + + L+G G
Sbjct: 34 EGNARDIIKGEAETR--VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 91
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR--------LRVAFYIAEALDYCNTEGRP 190
L+V E M + L +L + P R +++A IA+ + Y N + +
Sbjct: 92 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KF 150
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIP 244
++ DL A + D ++ FG+ ++ + Y + + PE LK+G
Sbjct: 151 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTT 210
Query: 245 ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD-SHLEGKFSSEEATQVVGLAS 303
S ++SFG VL ++ S P + + L +MD +L+ + E +V L
Sbjct: 211 SSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDGGYLDQPDNCPE--RVTDLMR 265
Query: 304 QCLQYEPRERPSTKNLVVTL 323
C Q+ P+ RP+ +V L
Sbjct: 266 MCWQFNPKMRPTFLEIVNLL 285
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 8/96 (8%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----SY 225
V FY+AE ALD+ ++ G +Y DL +L DE+G +L+ FGL K S+D + S+
Sbjct: 129 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 187
Query: 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSG 261
+ Y PE + + +SFG ++ ++L+G
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 13/135 (9%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----SY 225
V FY+AE ALD+ ++ G +Y DL +L DE+G +L+ FGL K S+D + S+
Sbjct: 128 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ Y PE + + +SFG ++ ++L+G P D R E + +++ +
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG--TLPFQGKD--RKETMTMILKAK 242
Query: 286 LE-GKFSSEEATQVV 299
L +F S EA ++
Sbjct: 243 LGMPQFLSPEAQSLL 257
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 8/96 (8%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----SY 225
V FY+AE ALD+ ++ G +Y DL +L DE+G +L+ FGL K S+D + S+
Sbjct: 128 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSG 261
+ Y PE + + +SFG ++ ++L+G
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ E++P +L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
++L K+ I+ L+ I + ++Y T+ R ++ DL +L + + ++ FG
Sbjct: 105 EYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K + + + PE L + S ++SFG VL +L +
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 223 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 283 RDLALRVDQIR 293
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 12/210 (5%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 56 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLL 115
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G + + +
Sbjct: 116 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGA 173
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ +T PE L + +S +++FG +L ++ + + P +D+ + L L D
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYR 231
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+E E +V L C Q+ P +RPS
Sbjct: 232 MERPEGCPE--KVYELMRACWQWNPSDRPS 259
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 21/234 (8%)
Query: 111 TQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFH--WEKQTIEWP 168
+F E + +LR + +G +V EY+ +L + L H ++ ++
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDER 137
Query: 169 LRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST 227
RL +A+ +A+ ++Y + P+ H DL + +L D+ ++ FGL + S
Sbjct: 138 RRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSK 197
Query: 228 NLAYTP----PEYLKNGRVIPESVIYSFGTVLLDLLSGK----HIPPSHALDMIRGENLN 279
A TP PE L++ +S +YSFG +L +L + + ++ P+ + + +
Sbjct: 198 XAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
Query: 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVP 333
L + +L QV + C EP +RPS ++ L R KS VP
Sbjct: 258 LEIPRNLN--------PQVAAIIEGCWTNEPWKRPSFAT-IMDLLRPLIKSAVP 302
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 111
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 112 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 170
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 171 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 223
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+E F L S+ L++ P +RP + ++
Sbjct: 224 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 24/257 (9%)
Query: 80 EKAANVVYKGRLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
E A + KG E R +AVK + A + +F EA + + L+G G
Sbjct: 32 EGNARDIIKGEAETR--VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 89
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR--------LRVAFYIAEALDYCNTEGRP 190
L+V E M + L +L + P R +++A IA+ + Y N + +
Sbjct: 90 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KF 148
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD------GKSYSTNLAYTPPEYLKNGRVIP 244
++ DL A + D ++ FG+ ++ + G + + PE LK+G
Sbjct: 149 VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTT 208
Query: 245 ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD-SHLEGKFSSEEATQVVGLAS 303
S ++SFG VL ++ S P + + L +MD +L+ + E +V L
Sbjct: 209 SSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDGGYLDQPDNCPE--RVTDLMR 263
Query: 304 QCLQYEPRERPSTKNLV 320
C Q+ P+ RP+ +V
Sbjct: 264 MCWQFNPKMRPTFLEIV 280
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 105/246 (42%), Gaps = 22/246 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 112
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G + + +
Sbjct: 113 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGA 170
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-----PSHALDMIRGENLNL 280
+ +T PE L + +S +++FG +L ++ + P PS +++
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK----- 225
Query: 281 LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRV 340
D +E E +V L C Q+ P +RPS + + +S + V +
Sbjct: 226 --DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 281
Query: 341 SKHEEA 346
K E
Sbjct: 282 GKRGEG 287
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 107
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 108 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 166
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 167 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 219
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+E F L S+ L++ P +RP + ++
Sbjct: 220 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 33/257 (12%)
Query: 79 GEKAANVVYKGRLENRQWI-AVKKFTKVAWPDPT---QFKEEAEGVGKLRRKRLANLIGY 134
G+ VY R +N ++I A+K K Q + E E LR + L GY
Sbjct: 17 GKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 135 CCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPL 191
L+ EY P T+ + L Q + R A YI E AL YC+++ + +
Sbjct: 77 FHDSTRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSK-KVI 130
Query: 192 YHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYSTNLAYTPPEYLKNGRVIPESV-I 248
+ D+ +L G+ +++ FG ++ + + L Y PPE ++ GR+ E V +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIE-GRMHDEKVDL 189
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD-----SHLEGKFSSEEATQVVGLAS 303
+S G + + L GK PP A N D S +E F L S
Sbjct: 190 WSLGVLCYEFLVGK--PPFEA---------NTYQDTYKRISRVEFTFPDFVTEGARDLIS 238
Query: 304 QCLQYEPRERPSTKNLV 320
+ L++ P +RP + ++
Sbjct: 239 RLLKHNPSQRPMLREVL 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 108
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 109 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC 167
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 168 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 220
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+E F L S+ L++ P +RP + ++
Sbjct: 221 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 112
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 113 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 171
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 172 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 224
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+E F L S+ L++ P +RP + ++
Sbjct: 225 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 259
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 24/257 (9%)
Query: 80 EKAANVVYKGRLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
E A + KG E R +AVK + A + +F EA + + L+G G
Sbjct: 35 EGNARDIIKGEAETR--VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 92
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR--------LRVAFYIAEALDYCNTEGRP 190
L+V E M + L +L + P R +++A IA+ + Y N + +
Sbjct: 93 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KF 151
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD------GKSYSTNLAYTPPEYLKNGRVIP 244
++ DL A + D ++ FG+ ++ + G + + PE LK+G
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTT 211
Query: 245 ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD-SHLEGKFSSEEATQVVGLAS 303
S ++SFG VL ++ S P + + L +MD +L+ + E +V L
Sbjct: 212 SSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDGGYLDQPDNCPE--RVTDLMR 266
Query: 304 QCLQYEPRERPSTKNLV 320
C Q+ P+ RP+ +V
Sbjct: 267 MCWQFNPKMRPTFLEIV 283
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 33/233 (14%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCC--AGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR 170
K+E E + L + + G C G+ L+ E++P+ +L ++L K I +
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK-NKNKINLKQQ 128
Query: 171 LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST--- 227
L+ A I + +DY + + ++ DL A VL + + ++ FGL K K T
Sbjct: 129 LKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD 187
Query: 228 ----NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSG------------KHIPPSHA-L 270
+ + PE L + S ++SFG L +LL+ K I P+H +
Sbjct: 188 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQM 247
Query: 271 DMIRGENLNLLMDSHLEGK---FSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+ R L+++ EGK +V L +C +++P R S +NL+
Sbjct: 248 TVTR------LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 294
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 33/233 (14%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCC--AGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR 170
K+E E + L + + G C G+ L+ E++P+ +L ++L K I +
Sbjct: 58 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK-NKNKINLKQQ 116
Query: 171 LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST--- 227
L+ A I + +DY + + ++ DL A VL + + ++ FGL K K T
Sbjct: 117 LKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD 175
Query: 228 ----NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSG------------KHIPPSHA-L 270
+ + PE L + S ++SFG L +LL+ K I P+H +
Sbjct: 176 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQM 235
Query: 271 DMIRGENLNLLMDSHLEGK---FSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+ R L+++ EGK +V L +C +++P R S +NL+
Sbjct: 236 TVTR------LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 282
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 14/182 (7%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG----RPLYHD 194
D LV M L H++H + R FY AE C E R +Y D
Sbjct: 257 DALCLVLTLMNGGDLKFHIYHMGQAGFP---EARAVFYAAEIC--CGLEDLHRERIVYRD 311
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSF 251
L +L D+ G R+S GL + +G K + Y PE +KN R ++
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWAL 371
Query: 252 GTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPR 311
G +L ++++G+ P I+ E + L+ E ++S + Q L SQ L +P
Sbjct: 372 GCLLYEMIAGQS-PFQQRKKKIKREEVERLVKEVPE-EYSERFSPQARSLCSQLLCKDPA 429
Query: 312 ER 313
ER
Sbjct: 430 ER 431
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 121/265 (45%), Gaps = 18/265 (6%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
++ E G VV G+ + + +AVK + + + +F +EA+ + KL +L
Sbjct: 11 TLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFY 69
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C +V EY+ N L +L + +E L + + + E + + + + ++
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESH-QFIH 127
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A L D D ++S FG+ + +D + S+ + ++ PE + +S
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 248 IYSFGTVLLDLLSGKHIP---PSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304
+++FG ++ ++ S +P +++ +++ + L HL +S+ Q++
Sbjct: 188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHL----ASDTIYQIM---YS 240
Query: 305 CLQYEPRERPSTKNLVVTLARLQTK 329
C P +RP+ + L+ ++ L+ K
Sbjct: 241 CWHELPEKRPTFQQLLSSIEPLREK 265
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 14/182 (7%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG----RPLYHD 194
D LV M L H++H + R FY AE C E R +Y D
Sbjct: 257 DALCLVLTLMNGGDLKFHIYHMGQAGFP---EARAVFYAAEIC--CGLEDLHRERIVYRD 311
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSF 251
L +L D+ G R+S GL + +G K + Y PE +KN R ++
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWAL 371
Query: 252 GTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPR 311
G +L ++++G+ P I+ E + L+ E ++S + Q L SQ L +P
Sbjct: 372 GCLLYEMIAGQS-PFQQRKKKIKREEVERLVKEVPE-EYSERFSPQARSLCSQLLCKDPA 429
Query: 312 ER 313
ER
Sbjct: 430 ER 431
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 111
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 112 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC 170
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 171 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 223
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+E F L S+ L++ P +RP + ++
Sbjct: 224 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 111
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 112 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC 170
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 171 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 223
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+E F L S+ L++ P +RP + ++
Sbjct: 224 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 106/234 (45%), Gaps = 21/234 (8%)
Query: 111 TQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFH--WEKQTIEWP 168
+F E + +LR + +G +V EY+ +L + L H ++ ++
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDER 137
Query: 169 LRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGL--MKNS--MDGK 223
RL +A+ +A+ ++Y + P+ H +L + +L D+ ++ FGL +K S + K
Sbjct: 138 RRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSK 197
Query: 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGK----HIPPSHALDMIRGENLN 279
S + + PE L++ +S +YSFG +L +L + + ++ P+ + + +
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
Query: 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVP 333
L + +L QV + C EP +RPS ++ L R KS VP
Sbjct: 258 LEIPRNLN--------PQVAAIIEGCWTNEPWKRPSFAT-IMDLLRPLIKSAVP 302
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 105/251 (41%), Gaps = 22/251 (8%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLA 154
+AVKK F+ E E + L+ + G C + R L+ EY+P +L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+L + I+ L+ I + ++Y T+ R ++ DL +L + + ++ FG
Sbjct: 105 DYL-QAHAERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 215 LMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHI 264
L K K + + + PE L + S ++SFG VL +L +
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 265 PPSHALDMIRGENLNLLMDSHL------EGKFSSEEAT--QVVGLASQCLQYEPRERPST 316
PP+ + MI + ++ HL G+ + ++ + ++C +RPS
Sbjct: 223 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 317 KNLVVTLARLQ 327
++L + + +++
Sbjct: 283 RDLALRVDQIR 293
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 108
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 109 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC 167
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 168 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 220
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+E F L S+ L++ P +RP + ++
Sbjct: 221 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 108
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 109 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC 167
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
L Y PPE ++ GR+ E V ++S G + + L GK PP A E + S
Sbjct: 168 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA--NTYQETYKRI--SR 220
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+E F L S+ L++ P +RP + ++
Sbjct: 221 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 24/257 (9%)
Query: 80 EKAANVVYKGRLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
E A + KG E R +AVK + A + +F EA + + L+G G
Sbjct: 35 EGNARDIIKGEAETR--VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 92
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR--------LRVAFYIAEALDYCNTEGRP 190
L+V E M + L +L + P R +++A IA+ + Y N + +
Sbjct: 93 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KF 151
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD------GKSYSTNLAYTPPEYLKNGRVIP 244
++ DL A + D ++ FG+ ++ + G + + PE LK+G
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTT 211
Query: 245 ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD-SHLEGKFSSEEATQVVGLAS 303
S ++SFG VL ++ S P + + L +MD +L+ + E +V L
Sbjct: 212 SSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDGGYLDQPDNCPE--RVTDLMR 266
Query: 304 QCLQYEPRERPSTKNLV 320
C Q+ P RP+ +V
Sbjct: 267 MCWQFNPNMRPTFLEIV 283
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQ 112
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L +G+ +++ FG ++ + +
Sbjct: 113 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC 171
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHA 269
L Y PPE ++ GR+ E V ++S G + + L G +PP A
Sbjct: 172 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVG--MPPFEA 212
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F +EA + +++ L L+G C ++ E+M L +L +Q + + L
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL 112
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A I+ A++Y + ++ DL A L E+ +++ FGL + M G + + +
Sbjct: 113 YMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGA 170
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-----PSHALDMIRGENLNL 280
+ +T PE L + +S +++FG +L ++ + P PS +++
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK----- 225
Query: 281 LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPS 315
D +E E +V L C Q+ P +RPS
Sbjct: 226 --DYRMERPEGCPE--KVYELMRACWQWNPSDRPS 256
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E LR + L GY L+ EY P T+ + L Q +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQ 112
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--SYS 226
R A YI E AL YC+++ R ++ D+ +L +G+ +++ FG ++ + +
Sbjct: 113 RTATYITELANALSYCHSK-RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC 171
Query: 227 TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHA 269
L Y PPE ++ GR+ E V ++S G + + L G +PP A
Sbjct: 172 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVG--MPPFEA 212
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 10/201 (4%)
Query: 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLAN 130
S ++ G V+ G +A+K K P F EEA+ + KL+ +L
Sbjct: 10 SLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQ 68
Query: 131 LIGYCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGR 189
L Y +E + +V EYM +L L E + ++ P + +A +A + Y
Sbjct: 69 L--YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY 126
Query: 190 PLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIP 244
++ DL + +L +++ FGL + D + + + +T PE GR
Sbjct: 127 -IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 245 ESVIYSFGTVLLDLLSGKHIP 265
+S ++SFG +L +L++ +P
Sbjct: 186 KSDVWSFGILLTELVTKGRVP 206
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 102/254 (40%), Gaps = 18/254 (7%)
Query: 86 VYKGRLE-NRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143
V+ GRL + +AVK + PD +F +EA + + + LIG C +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD 203
V E + L E + L++ A ++Y ++ ++ DL A L
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVT 247
Query: 204 EDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIPESVIYSFGTVLLD 257
E ++S FG+ + DG ++ + +T PE L GR ES ++SFG +L +
Sbjct: 248 EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 258 LLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT--QVVGLASQCLQYEPRERPS 315
S P + + E + G+ E V L QC YEP +RPS
Sbjct: 308 TFSLGASPYPNLSNQQTREFVE------KGGRLPCPELCPDAVFRLMEQCWAYEPGQRPS 361
Query: 316 TKNLVVTLARLQTK 329
+ L ++ +
Sbjct: 362 FSTIYQELQSIRKR 375
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 26/268 (9%)
Query: 77 ESGEKAANVVYKG------RLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLA 129
E G+ + +VY+G + E +A+K + A + +F EA + + +
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPL--------RLRVAFYIAEAL 181
L+G G L++ E M L +L + P+ +++A IA+ +
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 182 DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPE 235
Y N + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 143 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 201
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
LK+G S ++SFG VL ++ + P + + L +M+ L K
Sbjct: 202 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEGGLLDK-PDNCP 257
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ L C QY P+ RPS ++ ++
Sbjct: 258 DMLFELMRMCWQYNPKMRPSFLEIISSI 285
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR------------- 170
+ K + NL+G C ++ EY L ++L E +E+
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 171 -LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN--SMDGKSYST 227
+ A+ +A ++Y ++ + ++ DL A VL ED +++ FGL ++ +D +T
Sbjct: 152 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDL--LSGKHIPPSHALDMIRGENLNLL 281
N + + PE L + +S ++SFG +L ++ L G P ++ + LL
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-----LL 265
Query: 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ H K S ++ + C P +RP+ K LV L R+
Sbjct: 266 KEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 26/268 (9%)
Query: 77 ESGEKAANVVYKG------RLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLA 129
E G+ + +VY+G + E +A+K + A + +F EA + + +
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPL--------RLRVAFYIAEAL 181
L+G G L++ E M L +L + P+ +++A IA+ +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 182 DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPE 235
Y N + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 145 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
LK+G S ++SFG VL ++ + P + + L +M+ L K
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEGGLLDK-PDNCP 259
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ L C QY P+ RPS ++ ++
Sbjct: 260 DMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 26/268 (9%)
Query: 77 ESGEKAANVVYKG------RLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLA 129
E G+ + +VY+G + E +A+K + A + +F EA + + +
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPL--------RLRVAFYIAEAL 181
L+G G L++ E M L +L + P+ +++A IA+ +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 182 DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPE 235
Y N + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 146 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 204
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
LK+G S ++SFG VL ++ + P + + L +M+ L K
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEGGLLDK-PDNCP 260
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ L C QY P+ RPS ++ ++
Sbjct: 261 DMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 26/268 (9%)
Query: 77 ESGEKAANVVYKG------RLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLA 129
E G+ + +VY+G + E +A+K + A + +F EA + + +
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPL--------RLRVAFYIAEAL 181
L+G G L++ E M L +L + P+ +++A IA+ +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 182 DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPE 235
Y N + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 139 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
LK+G S ++SFG VL ++ + P + + L +M+ L K
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEGGLLDK-PDNCP 253
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ L C QY P+ RPS ++ ++
Sbjct: 254 DMLFELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 109/268 (40%), Gaps = 26/268 (9%)
Query: 77 ESGEKAANVVYKG------RLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLA 129
E G+ + +VY+G + E +A+K + A + +F EA + + +
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPL--------RLRVAFYIAEAL 181
L+G G L++ E M L +L P+ +++A IA+ +
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 182 DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPE 235
Y N + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 142 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 200
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
LK+G S ++SFG VL ++ + P + + L +M+ L K
Sbjct: 201 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEGGLLDK-PDNCP 256
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ L C QY P+ RPS ++ ++
Sbjct: 257 DMLFELMRMCWQYNPKMRPSFLEIISSI 284
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 26/268 (9%)
Query: 77 ESGEKAANVVYKG------RLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLA 129
E G+ + +VY+G + E +A+K + A + +F EA + + +
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPL--------RLRVAFYIAEAL 181
L+G G L++ E M L +L + P+ +++A IA+ +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 182 DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPE 235
Y N + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 152 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
LK+G S ++SFG VL ++ + P + + L +M+ L K
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEGGLLDK-PDNCP 266
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ L C QY P+ RPS ++ ++
Sbjct: 267 DMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 24/257 (9%)
Query: 80 EKAANVVYKGRLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
E A + KG E R +AVK + A + +F EA + + L+G G
Sbjct: 35 EGNARDIIKGEAETR--VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 92
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR--------LRVAFYIAEALDYCNTEGRP 190
L+V E M + L +L + P R +++A IA+ + Y N + +
Sbjct: 93 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KF 151
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIP 244
++ +L A + D ++ FG+ ++ + Y + + PE LK+G
Sbjct: 152 VHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTT 211
Query: 245 ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD-SHLEGKFSSEEATQVVGLAS 303
S ++SFG VL ++ S P + + L +MD +L+ + E +V L
Sbjct: 212 SSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDGGYLDQPDNCPE--RVTDLMR 266
Query: 304 QCLQYEPRERPSTKNLV 320
C Q+ P RP+ +V
Sbjct: 267 MCWQFNPNMRPTFLEIV 283
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 109/268 (40%), Gaps = 26/268 (9%)
Query: 77 ESGEKAANVVYKG------RLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLA 129
E G+ + +VY+G + E +A+K + A + +F EA + + +
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPL--------RLRVAFYIAEAL 181
L+G G L++ E M L +L P+ +++A IA+ +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 182 DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPE 235
Y N + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 152 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
LK+G S ++SFG VL ++ + P + + L +M+ L K
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEGGLLDK-PDNCP 266
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ L C QY P+ RPS ++ ++
Sbjct: 267 DMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 26/268 (9%)
Query: 77 ESGEKAANVVYKG------RLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLA 129
E G+ + +VY+G + E +A+K + A + +F EA + + +
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPL--------RLRVAFYIAEAL 181
L+G G L++ E M L +L + P+ +++A IA+ +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 182 DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPE 235
Y N + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 145 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
LK+G S ++SFG VL ++ + P + + L +M+ L K
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEGGLLDK-PDNCP 259
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ L C QY P+ RPS ++ ++
Sbjct: 260 DMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 102/254 (40%), Gaps = 18/254 (7%)
Query: 86 VYKGRLE-NRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143
V+ GRL + +AVK + PD +F +EA + + + LIG C +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD 203
V E + L E + L++ A ++Y ++ ++ DL A L
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVT 247
Query: 204 EDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIPESVIYSFGTVLLD 257
E ++S FG+ + DG ++ + +T PE L GR ES ++SFG +L +
Sbjct: 248 EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 258 LLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT--QVVGLASQCLQYEPRERPS 315
S P + + E + G+ E V L QC YEP +RPS
Sbjct: 308 TFSLGASPYPNLSNQQTREFVE------KGGRLPCPELCPDAVFRLMEQCWAYEPGQRPS 361
Query: 316 TKNLVVTLARLQTK 329
+ L ++ +
Sbjct: 362 FSTIYQELQSIRKR 375
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 24/257 (9%)
Query: 80 EKAANVVYKGRLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
E A + KG E R +AVK + A + +F EA + + L+G G
Sbjct: 36 EGNARDIIKGEAETR--VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 93
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR--------LRVAFYIAEALDYCNTEGRP 190
L+V E M + L +L + P R +++A IA+ + Y N + +
Sbjct: 94 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KF 152
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIP 244
++ +L A + D ++ FG+ ++ + Y + + PE LK+G
Sbjct: 153 VHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTT 212
Query: 245 ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD-SHLEGKFSSEEATQVVGLAS 303
S ++SFG VL ++ S P + + L +MD +L+ + E +V L
Sbjct: 213 SSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDGGYLDQPDNCPE--RVTDLMR 267
Query: 304 QCLQYEPRERPSTKNLV 320
C Q+ P RP+ +V
Sbjct: 268 MCWQFNPNMRPTFLEIV 284
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 10/198 (5%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+V G A V+ G +AVK + + P F EA + +L+ +RL L
Sbjct: 17 LVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRL-- 73
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
Y E + ++ EYM N +L L + L +A IAE + + E ++
Sbjct: 74 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIH 132
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A +L + +++ FGL + D + + + +T PE + G +S
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 248 IYSFGTVLLDLLSGKHIP 265
++SFG +L ++++ IP
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 39/237 (16%)
Query: 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDLNAY 198
V EY+ L H+ K + R FY AE L + +++G +Y DL
Sbjct: 95 FFVMEYLNGGDLMYHIQSCHKFDLS-----RATFYAAEIILGLQFLHSKG-IVYRDLKLD 148
Query: 199 RVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYSFGTV 254
+L D+DG +++ FG+ K +M G + + TP PE L + +SFG +
Sbjct: 149 NILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVL 208
Query: 255 LLDLLSGKHIPPSHALDMIRGENL--NLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
L ++L G+ P H D E L ++ MD+ ++ +EA L + EP +
Sbjct: 209 LYEMLIGQ--SPFHGQD---EEELFHSIRMDNPFYPRWLEKEAKD---LLVKLFVREPEK 260
Query: 313 RPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQ----STPQRPLSPLAEACSRMD 365
RL + D+ + + R EE + P RP CS D
Sbjct: 261 ------------RLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFD 305
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR------------- 170
+ K + NL+G C ++ EY L ++L +E+
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 171 -LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN--SMDGKSYST 227
+ A+ +A ++Y ++ + ++ DL A VL ED +++ FGL ++ +D +T
Sbjct: 152 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDL--LSGKHIPPSHALDMIRGENLNLL 281
N + + PE L + +S ++SFG +L ++ L G P ++ + LL
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-----LL 265
Query: 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ H K S ++ + C P +RP+ K LV L R+
Sbjct: 266 KEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 111/268 (41%), Gaps = 26/268 (9%)
Query: 77 ESGEKAANVVYKG------RLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLA 129
E G+ + +VY+G + E +A+K + A + +F EA + + +
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPL--------RLRVAFYIAEAL 181
L+G G L++ E M L +L + P+ +++A IA+ +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 182 DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD------GKSYSTNLAYTPPE 235
Y N + ++ DL A + ED ++ FG+ ++ + G + + PE
Sbjct: 137 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 195
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
LK+G S ++SFG VL ++ + P + + L +M+ L K
Sbjct: 196 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEGGLLDK-PDNCP 251
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTL 323
++ L C QY P+ RPS ++ ++
Sbjct: 252 DMLLELMRMCWQYNPKMRPSFLEIISSI 279
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 26/268 (9%)
Query: 77 ESGEKAANVVYKG------RLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLA 129
E G+ + +VY+G + E +A+K + A + +F EA + + +
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPL--------RLRVAFYIAEAL 181
L+G G L++ E M L +L + P+ +++A IA+ +
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 182 DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPE 235
Y N + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 174 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 232
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
LK+G S ++SFG VL ++ + P + + L +M+ L K
Sbjct: 233 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEGGLLDK-PDNCP 288
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ L C QY P+ RPS ++ ++
Sbjct: 289 DMLFELMRMCWQYNPKMRPSFLEIISSI 316
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 39/237 (16%)
Query: 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDLNAY 198
V EY+ L H+ K + R FY AE L + +++G +Y DL
Sbjct: 94 FFVMEYLNGGDLMYHIQSCHKFDLS-----RATFYAAEIILGLQFLHSKG-IVYRDLKLD 147
Query: 199 RVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYSFGTV 254
+L D+DG +++ FG+ K +M G + + TP PE L + +SFG +
Sbjct: 148 NILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVL 207
Query: 255 LLDLLSGKHIPPSHALDMIRGENL--NLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
L ++L G+ P H D E L ++ MD+ ++ +EA L + EP +
Sbjct: 208 LYEMLIGQ--SPFHGQD---EEELFHSIRMDNPFYPRWLEKEAKD---LLVKLFVREPEK 259
Query: 313 RPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQ----STPQRPLSPLAEACSRMD 365
RL + D+ + + R EE + P RP CS D
Sbjct: 260 ------------RLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFD 304
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 24/185 (12%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY L FH ++ + R R FY AE ALDY ++E +Y DL
Sbjct: 221 DRLCFVMEYANGGEL---FFHLSRERVFSEDRAR--FYGAEIVSALDYLHSEKNVVYRDL 275
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSM-DG---KSYSTNLAYTPPEYLKN---GRVIPESVI 248
++ D+DG +++ FGL K + DG K++ Y PE L++ GR +
Sbjct: 276 KLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVD---W 332
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+ G V+ +++ G+ P + D + L +LM+ E +F + L S L+
Sbjct: 333 WGLGVVMYEMMCGR--LPFYNQDHEKLFEL-ILME---EIRFPRTLGPEAKSLLSGLLKK 386
Query: 309 EPRER 313
+P++R
Sbjct: 387 DPKQR 391
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 114/301 (37%), Gaps = 38/301 (12%)
Query: 66 TNNFSSDNIV--SESGEKAANVVYKGRLEN------RQWIAVKKFTKVAWPDPTQFKEEA 117
+ NIV E GE A V+ N + +AVK + F EA
Sbjct: 7 VQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREA 66
Query: 118 EGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTI-----------E 166
E + L+ + + G C GD ++V EYM + L K L +
Sbjct: 67 ELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELT 126
Query: 167 WPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYS 226
L +A IA + Y ++ ++ DL L E+ ++ FG+ ++ Y
Sbjct: 127 QSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYR 185
Query: 227 TN------LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLN 279
+ + PPE + + ES ++S G VL ++ + GK P + L N
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ--PWYQLSN------N 237
Query: 280 LLMDSHLEGKFSSEEAT---QVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
+++ +G+ T +V L C Q EP R + K + L L S V ++
Sbjct: 238 EVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPVYLDI 297
Query: 337 M 337
+
Sbjct: 298 L 298
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 24/185 (12%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY L FH ++ + R R FY AE ALDY ++E +Y DL
Sbjct: 224 DRLCFVMEYANGGEL---FFHLSRERVFSEDRAR--FYGAEIVSALDYLHSEKNVVYRDL 278
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSM-DG---KSYSTNLAYTPPEYLKN---GRVIPESVI 248
++ D+DG +++ FGL K + DG K++ Y PE L++ GR +
Sbjct: 279 KLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVD---W 335
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+ G V+ +++ G+ P + D + L +LM+ E +F + L S L+
Sbjct: 336 WGLGVVMYEMMCGR--LPFYNQDHEKLFEL-ILME---EIRFPRTLGPEAKSLLSGLLKK 389
Query: 309 EPRER 313
+P++R
Sbjct: 390 DPKQR 394
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 26/268 (9%)
Query: 77 ESGEKAANVVYKG------RLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLA 129
E G+ + +VY+G + E +A+K + A + +F EA + + +
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPL--------RLRVAFYIAEAL 181
L+G G L++ E M L +L + P+ +++A IA+ +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 182 DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD------GKSYSTNLAYTPPE 235
Y N + ++ DL A + ED ++ FG+ ++ + G + + PE
Sbjct: 146 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 204
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
LK+G S ++SFG VL ++ + P + + L +M+ L K
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEGGLLDK-PDNCP 260
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ L C QY P+ RPS ++ ++
Sbjct: 261 DMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 26/268 (9%)
Query: 77 ESGEKAANVVYKG------RLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLA 129
E G+ + +VY+G + E +A+K + A + +F EA + + +
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPL--------RLRVAFYIAEAL 181
L+G G L++ E M L +L + P+ +++A IA+ +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 182 DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPE 235
Y N + ++ DL A ED ++ FG+ ++ + Y + + PE
Sbjct: 139 AYLNAN-KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
LK+G S ++SFG VL ++ + P + + L +M+ L K
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEGGLLDK-PDNCP 253
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTL 323
++ L C QY P+ RPS ++ ++
Sbjct: 254 DMLLELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 118/304 (38%), Gaps = 49/304 (16%)
Query: 64 AATNNFSSDNIV--SESGEKAANVVYKGRLEN------RQWIAVKKFTKVAWPDPTQFKE 115
A ++ +IV E GE A V+ N + +AVK + + F+
Sbjct: 10 ACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR 69
Query: 116 EAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHL---------FHWEKQTIE 166
EAE + L+ + + G C G L+V EYM + L + L +
Sbjct: 70 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 129
Query: 167 WPLRL----RVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMD 221
PL L VA +A + Y G H DL L + ++ FG+ ++
Sbjct: 130 GPLGLGQLLAVASQVAAGMVY--LAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 187
Query: 222 GKSYSTN------LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKH----IPPSHAL 270
Y + + PPE + + ES ++SFG VL ++ + GK + + A+
Sbjct: 188 TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 247
Query: 271 DMI-RGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329
D I +G L + +V + C Q EP++R S K++ ARLQ
Sbjct: 248 DCITQGREL----------ERPRACPPEVYAIMRGCWQREPQQRHSIKDV---HARLQAL 294
Query: 330 SDVP 333
+ P
Sbjct: 295 AQAP 298
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 118/304 (38%), Gaps = 49/304 (16%)
Query: 64 AATNNFSSDNIV--SESGEKAANVVYKGRLEN------RQWIAVKKFTKVAWPDPTQFKE 115
A ++ +IV E GE A V+ N + +AVK + + F+
Sbjct: 4 ACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR 63
Query: 116 EAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHL---------FHWEKQTIE 166
EAE + L+ + + G C G L+V EYM + L + L +
Sbjct: 64 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 123
Query: 167 WPLRL----RVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMD 221
PL L VA +A + Y G H DL L + ++ FG+ ++
Sbjct: 124 GPLGLGQLLAVASQVAAGMVY--LAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 181
Query: 222 GKSYSTN------LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKH----IPPSHAL 270
Y + + PPE + + ES ++SFG VL ++ + GK + + A+
Sbjct: 182 TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 241
Query: 271 DMI-RGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329
D I +G L + +V + C Q EP++R S K++ ARLQ
Sbjct: 242 DCITQGREL----------ERPRACPPEVYAIMRGCWQREPQQRHSIKDV---HARLQAL 288
Query: 330 SDVP 333
+ P
Sbjct: 289 AQAP 292
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP--- 233
I + LDY ++E + ++ D+ A VL E G+ +L+ FG+ D + TP
Sbjct: 113 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 171
Query: 234 -PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH---LEGK 289
PE +K ++ I+S G ++L G+ PP L ++ L L+ ++ LEG
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGE--PPHSELHPMK--VLFLIPKNNPPTLEGN 227
Query: 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+S + CL EP RP+ K L+
Sbjct: 228 YSK----PLKEFVEACLNKEPSFRPTAKELL 254
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----SY 225
V FY+AE LD+ ++ G +Y DL +L DE+G +L+ FGL K ++D + S+
Sbjct: 132 VKFYLAELALGLDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF 190
Query: 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ Y PE + + +S+G ++ ++L+G P D R E + L++ +
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGS--LPFQGKD--RKETMTLILKAK 246
Query: 286 LE-GKFSSEEATQVV 299
L +F S EA ++
Sbjct: 247 LGMPQFLSTEAQSLL 261
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP--- 233
I + LDY ++E + ++ D+ A VL E G+ +L+ FG+ D + TP
Sbjct: 128 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWM 186
Query: 234 -PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH---LEGK 289
PE +K ++ I+S G ++L G+ PP L ++ L L+ ++ LEG
Sbjct: 187 APEVIKQSAYDSKADIWSLGITAIELARGE--PPHSELHPMK--VLFLIPKNNPPTLEGN 242
Query: 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+S + CL EP RP+ K L+
Sbjct: 243 YSKP----LKEFVEACLNKEPSFRPTAKELL 269
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR------------- 170
+ K + NL+G C ++ EY L ++L +E+
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 171 -LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN--SMDGKSYST 227
+ A+ +A ++Y ++ + ++ DL A VL ED +++ FGL ++ +D +T
Sbjct: 152 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDL--LSGKHIPPSHALDMIRGENLNLL 281
N + + PE L + +S ++SFG +L ++ L G P ++ + LL
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-----LL 265
Query: 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ H K S ++ + C P +RP+ K LV L R+
Sbjct: 266 KEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR------------- 170
+ K + NL+G C ++ EY L ++L +E+
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 171 -LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN--SMDGKSYST 227
+ A+ +A ++Y ++ + ++ DL A VL ED +++ FGL ++ +D +T
Sbjct: 145 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDL--LSGKHIPPSHALDMIRGENLNLL 281
N + + PE L + +S ++SFG +L ++ L G P ++ + LL
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-----LL 258
Query: 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ H K S ++ + C P +RP+ K LV L R+
Sbjct: 259 KEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR------------- 170
+ K + NL+G C ++ EY L ++L +E+
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 171 -LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN--SMDGKSYST 227
+ A+ +A ++Y ++ + ++ DL A VL ED +++ FGL ++ +D +T
Sbjct: 144 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDL--LSGKHIPPSHALDMIRGENLNLL 281
N + + PE L + +S ++SFG +L ++ L G P ++ + LL
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-----LL 257
Query: 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ H K S ++ + C P +RP+ K LV L R+
Sbjct: 258 KEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR------------- 170
+ K + NL+G C ++ EY L ++L +E+
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 171 -LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN--SMDGKSYST 227
+ A+ +A ++Y ++ + ++ DL A VL ED +++ FGL ++ +D +T
Sbjct: 141 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDL--LSGKHIPPSHALDMIRGENLNLL 281
N + + PE L + +S ++SFG +L ++ L G P ++ + LL
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-----LL 254
Query: 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ H K S ++ + C P +RP+ K LV L R+
Sbjct: 255 KEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 7/200 (3%)
Query: 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLAN 130
S +V G V+ G N +AVK K F EEA + L+ +L
Sbjct: 14 SIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVR 72
Query: 131 LIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRP 190
L + ++ EYM +L L E + P + + IAE + Y +
Sbjct: 73 LYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY- 131
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPE 245
++ DL A VL E +++ FGL + D + + + +T PE + G +
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 246 SVIYSFGTVLLDLLSGKHIP 265
S ++SFG +L ++++ IP
Sbjct: 192 SDVWSFGILLYEIVTYGKIP 211
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP--- 233
I + LDY ++E + ++ D+ A VL E G+ +L+ FG+ D + TP
Sbjct: 113 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWM 171
Query: 234 -PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH---LEGK 289
PE +K ++ I+S G ++L G+ PP L ++ L L+ ++ LEG
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGE--PPHSELHPMK--VLFLIPKNNPPTLEGN 227
Query: 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+S + CL EP RP+ K L+
Sbjct: 228 YSK----PLKEFVEACLNKEPSFRPTAKELL 254
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 120/278 (43%), Gaps = 51/278 (18%)
Query: 71 SDNIVSESGEKAANVVYKG----RLENRQWIAVKKFTKVAWPDPTQ-FKEEAEGVGKLRR 125
SD ++ G+ VVY G + +NR A+K +++ + F E + L
Sbjct: 25 SDRVI---GKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNH 81
Query: 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEK-QTIEWPLR-------LRVAFYI 177
+ LIG +L E +P+ L ++ H + Q I P R + +
Sbjct: 82 PNVLALIGI-------MLPPEGLPH-VLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQV 133
Query: 178 AEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------L 229
A ++Y E + ++ DL A + DE +++ FGL ++ +D + YS +
Sbjct: 134 ARGMEYL-AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV 192
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALD-------MIRGENLNLLM 282
+T E L+ R +S ++SFG +L +LL+ + PP +D + +G L
Sbjct: 193 KWTALESLQTYRFTTKSDVWSFGVLLWELLT-RGAPPYRHIDPFDLTHFLAQGRRLP--- 248
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+ ++ + QV+ QC + +P RP+ + LV
Sbjct: 249 ----QPEYCPDSLYQVM---QQCWEADPAVRPTFRVLV 279
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL-RV--------- 173
+ K + NL+G C ++ EY L ++L +E+ + RV
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 174 ----AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYST 227
+ +A ++Y ++ + ++ DL A VL E+ R++ FGL + N++D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLM 282
N + + PE L + +S ++SFG ++ ++ + P P ++ E LL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELFKLLK 273
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
+ H K + ++ + C P +RP+ K LV L R+ T
Sbjct: 274 EGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAE--GVGKLRRKRLANLIGYCC 136
G VYKG L+ R +AVK F+ + + F E V + +A I
Sbjct: 22 GRGRYGAVYKGSLDERP-VAVKVFS---FANRQNFINEKNIYRVPLMEHDNIARFI---- 73
Query: 137 AGDER---------LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE 187
GDER LLV EY PN +L K+L T +W R+A + L Y +TE
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHTE 130
Query: 188 ------GRPL--YHDLNAYRVLFDEDGDPRLSCFGL 215
+P + DLN+ VL DG +S FGL
Sbjct: 131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 118/304 (38%), Gaps = 49/304 (16%)
Query: 64 AATNNFSSDNIV--SESGEKAANVVYKGRLEN------RQWIAVKKFTKVAWPDPTQFKE 115
A ++ +IV E GE A V+ N + +AVK + + F+
Sbjct: 33 ACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR 92
Query: 116 EAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHL---------FHWEKQTIE 166
EAE + L+ + + G C G L+V EYM + L + L +
Sbjct: 93 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 152
Query: 167 WPLRLR----VAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMD 221
PL L VA +A + Y G H DL L + ++ FG+ ++
Sbjct: 153 GPLGLGQLLAVASQVAAGMVY--LAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 210
Query: 222 GKSYSTN------LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKH----IPPSHAL 270
Y + + PPE + + ES ++SFG VL ++ + GK + + A+
Sbjct: 211 TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 270
Query: 271 DMI-RGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329
D I +G L + +V + C Q EP++R S K++ ARLQ
Sbjct: 271 DCITQGREL----------ERPRACPPEVYAIMRGCWQREPQQRHSIKDV---HARLQAL 317
Query: 330 SDVP 333
+ P
Sbjct: 318 AQAP 321
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 7/200 (3%)
Query: 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLAN 130
S +V + G V+ G N +AVK K F EEA + L+ +L
Sbjct: 13 SIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVR 71
Query: 131 LIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRP 190
L + ++ E+M +L L E + P + + IAE + Y +
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY- 130
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPE 245
++ DL A VL E +++ FGL + D + + + +T PE + G +
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 246 SVIYSFGTVLLDLLSGKHIP 265
S ++SFG +L ++++ IP
Sbjct: 191 SNVWSFGILLYEIVTYGKIP 210
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL-RV--------- 173
+ K + NL+G C ++ EY L ++L +E+ + RV
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 174 ----AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYST 227
+ +A ++Y ++ + ++ DL A VL E+ +++ FGL + N++D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLM 282
N + + PE L + +S ++SFG ++ ++ + P P ++ E LL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELFKLLK 273
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
+ H K + ++ + C P +RP+ K LV L R+ T
Sbjct: 274 EGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP--- 233
I + LDY ++E + ++ D+ A VL E G+ +L+ FG+ D + TP
Sbjct: 133 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 191
Query: 234 -PEYLKNGRVIPESVIYSFGTVLLDLLSGK----HIPPSHALDMIRGENLNLLMDSHLEG 288
PE +K ++ I+S G ++L G+ + P L +I N LEG
Sbjct: 192 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTLEG 246
Query: 289 KFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+S + CL EP RP+ K L+
Sbjct: 247 NYSK----PLKEFVEACLNKEPSFRPTAKELL 274
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 24/185 (12%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY L FH ++ + R R FY AE ALDY ++E +Y DL
Sbjct: 82 DRLCFVMEYANGGEL---FFHLSRERVFSEDRAR--FYGAEIVSALDYLHSEKNVVYRDL 136
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSM-DG---KSYSTNLAYTPPEYLKN---GRVIPESVI 248
++ D+DG +++ FGL K + DG K + Y PE L++ GR +
Sbjct: 137 KLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVD---W 193
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+ G V+ +++ G+ P + D + L +LM+ E +F + L S L+
Sbjct: 194 WGLGVVMYEMMCGR--LPFYNQDHEKLFEL-ILME---EIRFPRTLGPEAKSLLSGLLKK 247
Query: 309 EPRER 313
+P++R
Sbjct: 248 DPKQR 252
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 24/185 (12%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY L FH ++ + R R FY AE ALDY ++E +Y DL
Sbjct: 83 DRLCFVMEYANGGEL---FFHLSRERVFSEDRAR--FYGAEIVSALDYLHSEKNVVYRDL 137
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSM-DG---KSYSTNLAYTPPEYLKN---GRVIPESVI 248
++ D+DG +++ FGL K + DG K + Y PE L++ GR +
Sbjct: 138 KLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVD---W 194
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+ G V+ +++ G+ P + D + L +LM+ E +F + L S L+
Sbjct: 195 WGLGVVMYEMMCGR--LPFYNQDHEKLFEL-ILME---EIRFPRTLGPEAKSLLSGLLKK 248
Query: 309 EPRER 313
+P++R
Sbjct: 249 DPKQR 253
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR------------- 170
+ K + NL+G C ++ EY L ++L +E+
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 171 -LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN--SMDGKSYST 227
+ A+ +A ++Y ++ + ++ DL A VL ED +++ FGL ++ +D +T
Sbjct: 193 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDL--LSGKHIPPSHALDMIRGENLNLL 281
N + + PE L + +S ++SFG +L ++ L G P ++ + LL
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-----LL 306
Query: 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ H K S ++ + C P +RP+ K LV L R+
Sbjct: 307 KEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 24/185 (12%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY L FH ++ + R R FY AE ALDY ++E +Y DL
Sbjct: 81 DRLCFVMEYANGGEL---FFHLSRERVFSEDRAR--FYGAEIVSALDYLHSEKNVVYRDL 135
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSM-DG---KSYSTNLAYTPPEYLKN---GRVIPESVI 248
++ D+DG +++ FGL K + DG K + Y PE L++ GR +
Sbjct: 136 KLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVD---W 192
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+ G V+ +++ G+ P + D + L +LM+ E +F + L S L+
Sbjct: 193 WGLGVVMYEMMCGR--LPFYNQDHEKLFEL-ILME---EIRFPRTLGPEAKSLLSGLLKK 246
Query: 309 EPRER 313
+P++R
Sbjct: 247 DPKQR 251
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR------------- 170
+ K + NL+G C ++ EY L ++L +E+
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 171 -LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN--SMDGKSYST 227
+ A+ +A ++Y ++ + ++ DL A VL ED +++ FGL ++ +D +T
Sbjct: 137 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDL--LSGKHIPPSHALDMIRGENLNLL 281
N + + PE L + +S ++SFG +L ++ L G P ++ + LL
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-----LL 250
Query: 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ H K S ++ + C P +RP+ K LV L R+
Sbjct: 251 KEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+V G V+ G +AVK + + P F EA + +L+ +RL L
Sbjct: 26 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRL-- 82
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
Y E + ++ EYM N +L L + L +A IAE + + E ++
Sbjct: 83 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIH 141
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A +L + +++ FGL + D + + + +T PE + G +S
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 248 IYSFGTVLLDLLSGKHIP 265
++SFG +L ++++ IP
Sbjct: 202 VWSFGILLTEIVTHGRIP 219
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+V G V+ G +AVK + + P F EA + +L+ +RL L
Sbjct: 25 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRL-- 81
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
Y E + ++ EYM N +L L + L +A IAE + + E ++
Sbjct: 82 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIH 140
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A +L + +++ FGL + D + + + +T PE + G +S
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 200
Query: 248 IYSFGTVLLDLLSGKHIP 265
++SFG +L ++++ IP
Sbjct: 201 VWSFGILLTEIVTHGRIP 218
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL-RV--------- 173
+ K + NL+G C ++ EY L ++L +E+ + RV
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 174 ----AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYST 227
+ +A ++Y ++ + ++ DL A VL E+ +++ FGL + N++D +T
Sbjct: 146 LVSCTYQLARGMEYLASQ-KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLM 282
N + + PE L + +S ++SFG ++ ++ + P P ++ E LL
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELFKLLK 260
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
+ H K + ++ + C P +RP+ K LV L R+ T
Sbjct: 261 EGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 305
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+V G V+ G +AVK + + P F EA + +L+ +RL L
Sbjct: 23 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRL-- 79
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
Y E + ++ EYM N +L L + L +A IAE + + E ++
Sbjct: 80 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIH 138
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A +L + +++ FGL + D + + + +T PE + G +S
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 248 IYSFGTVLLDLLSGKHIP 265
++SFG +L ++++ IP
Sbjct: 199 VWSFGILLTEIVTHGRIP 216
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+V G V+ G +AVK + + P F EA + +L+ +RL L
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL-- 73
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
Y E + ++ EYM N +L L + L +A IAE + + E ++
Sbjct: 74 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIH 132
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A +L + +++ FGL + D + + + +T PE + G +S
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 248 IYSFGTVLLDLLSGKHIP 265
++SFG +L ++++ IP
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+V G V+ G +AVK + + P F EA + +L+ +RL L
Sbjct: 18 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL-- 74
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
Y E + ++ EYM N +L L + L +A IAE + + E ++
Sbjct: 75 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIH 133
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A +L + +++ FGL + D + + + +T PE + G +S
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 193
Query: 248 IYSFGTVLLDLLSGKHIP 265
++SFG +L ++++ IP
Sbjct: 194 VWSFGILLTEIVTHGRIP 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+V G V+ G +AVK + + P F EA + +L+ +RL L
Sbjct: 19 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL-- 75
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
Y E + ++ EYM N +L L + L +A IAE + + E ++
Sbjct: 76 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIH 134
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A +L + +++ FGL + D + + + +T PE + G +S
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 248 IYSFGTVLLDLLSGKHIP 265
++SFG +L ++++ IP
Sbjct: 195 VWSFGILLTEIVTHGRIP 212
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR------------- 170
+ K + NL+G C ++ EY L ++L +E+
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 171 -LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN--SMDGKSYST 227
+ A+ +A ++Y ++ + ++ DL A VL ED +++ FGL ++ +D +T
Sbjct: 152 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDL--LSGKHIPPSHALDMIRGENLNLL 281
N + + PE L + +S ++SFG +L ++ L G P ++ + LL
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-----LL 265
Query: 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ H K S ++ + C P +RP+ K LV L R+
Sbjct: 266 KEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+V G V+ G +AVK + + P F EA + +L+ +RL L
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL-- 73
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
Y E + ++ EYM N +L L + L +A IAE + + E ++
Sbjct: 74 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIH 132
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A +L + +++ FGL + D + + + +T PE + G +S
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 248 IYSFGTVLLDLLSGKHIP 265
++SFG +L ++++ IP
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+V G V+ G +AVK + + P F EA + +L+ +RL L
Sbjct: 12 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRL-- 68
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
Y E + ++ EYM N +L L + L +A IAE + + E ++
Sbjct: 69 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIH 127
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A +L + +++ FGL + D + + + +T PE + G +S
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 248 IYSFGTVLLDLLSGKHIP 265
++SFG +L ++++ IP
Sbjct: 188 VWSFGILLTEIVTHGRIP 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+V G V+ G +AVK + + P F EA + +L+ +RL L
Sbjct: 23 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL-- 79
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
Y E + ++ EYM N +L L + L +A IAE + + E ++
Sbjct: 80 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIH 138
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A +L + +++ FGL + D + + + +T PE + G +S
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 248 IYSFGTVLLDLLSGKHIP 265
++SFG +L ++++ IP
Sbjct: 199 VWSFGILLTEIVTHGRIP 216
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL-RV--------- 173
+ K + NL+G C ++ EY L ++L +E+ + RV
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 174 ----AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYST 227
+ +A ++Y ++ + ++ DL A VL E+ +++ FGL + N++D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLM 282
N + + PE L + +S ++SFG ++ ++ + P P ++ E LL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELFKLLK 273
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
+ H K + ++ + C P +RP+ K LV L R+ T
Sbjct: 274 EGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+V G V+ G +AVK + + P F EA + +L+ +RL L
Sbjct: 22 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL-- 78
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
Y E + ++ EYM N +L L + L +A IAE + + E ++
Sbjct: 79 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIH 137
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A +L + +++ FGL + D + + + +T PE + G +S
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 248 IYSFGTVLLDLLSGKHIP 265
++SFG +L ++++ IP
Sbjct: 198 VWSFGILLTEIVTHGRIP 215
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+V G V+ G +AVK + + P F EA + +L+ +RL L
Sbjct: 27 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRL-- 83
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
Y E + ++ EYM N +L L + L +A IAE + + E ++
Sbjct: 84 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIH 142
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A +L + +++ FGL + D + + + +T PE + G +S
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 202
Query: 248 IYSFGTVLLDLLSGKHIP 265
++SFG +L ++++ IP
Sbjct: 203 VWSFGILLTEIVTHGRIP 220
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 40/242 (16%)
Query: 88 KGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147
K R E+R+ +AV + P+ Q++E E G L ++ YC GD
Sbjct: 65 KEREESRREVAV--LANMKHPNIVQYRESFEENGSL-----YIVMDYCEGGD-------L 110
Query: 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD 207
K + E Q ++W ++ I AL + + + + L+ D+ + + +DG
Sbjct: 111 FKRINAQKGVLFQEDQILDWFVQ------ICLALKHVH-DRKILHRDIKSQNIFLTKDGT 163
Query: 208 PRLSCFGL---------MKNSMDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDL 258
+L FG+ + + G Y Y PE +N +S I++ G VL +L
Sbjct: 164 VQLGDFGIARVLNSTVELARACIGTPY-----YLSPEICENKPYNNKSDIWALGCVLYEL 218
Query: 259 LSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKN 318
+ K HA + +NL L + S S + + L SQ + PR+RPS +
Sbjct: 219 CTLK-----HAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNS 273
Query: 319 LV 320
++
Sbjct: 274 IL 275
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL-RV--------- 173
+ K + NL+G C ++ EY L ++L +E+ + RV
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 174 ----AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYST 227
+ +A ++Y ++ + ++ DL A VL E+ +++ FGL + N++D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLM 282
N + + PE L + +S ++SFG ++ ++ + P P ++ E LL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELFKLLK 273
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
+ H K + ++ + C P +RP+ K LV L R+ T
Sbjct: 274 EGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL-RV--------- 173
+ K + NL+G C ++ EY L ++L +E+ + RV
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 174 ----AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYST 227
+ +A ++Y ++ + ++ DL A VL E+ +++ FGL + N++D +T
Sbjct: 151 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLM 282
N + + PE L + +S ++SFG ++ ++ + P P ++ E LL
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELFKLLK 265
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
+ H K + ++ + C P +RP+ K LV L R+ T
Sbjct: 266 EGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 310
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL-RV--------- 173
+ K + NL+G C ++ EY L ++L +E+ + RV
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 174 ----AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYST 227
+ +A ++Y ++ + ++ DL A VL E+ +++ FGL + N++D +T
Sbjct: 205 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLM 282
N + + PE L + +S ++SFG ++ ++ + P P ++ E LL
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELFKLLK 319
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
+ H K + ++ + C P +RP+ K LV L R+ T
Sbjct: 320 EGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL-RV--------- 173
+ K + NL+G C ++ EY L ++L +E+ + RV
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 174 ----AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYST 227
+ +A ++Y ++ + ++ DL A VL E+ +++ FGL + N++D +T
Sbjct: 148 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLM 282
N + + PE L + +S ++SFG ++ ++ + P P ++ E LL
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELFKLLK 262
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
+ H K + ++ + C P +RP+ K LV L R+ T
Sbjct: 263 EGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 307
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+V G V+ G +AVK + + P F EA + +L+ +RL L
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL-- 73
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
Y E + ++ EYM N +L L + L +A IAE + + E ++
Sbjct: 74 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIH 132
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A +L + +++ FGL + D + + + +T PE + G +S
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 248 IYSFGTVLLDLLSGKHIP 265
++SFG +L ++++ IP
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP--- 233
I + LDY ++E + ++ D+ A VL E GD +L+ FG+ D + TP
Sbjct: 129 ILKGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 187
Query: 234 -PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH---LEGK 289
PE ++ ++ I+S G ++L G+ PP+ + +R L L+ ++ L G
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGE--PPNSDMHPMR--VLFLIPKNNPPTLVGD 243
Query: 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
F+ + CL +P RP+ K L+
Sbjct: 244 FTKSFKEFI----DACLNKDPSFRPTAKELL 270
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 38/229 (16%)
Query: 69 FSSDNI--VSESGEKAANVVYKGR------LENRQWIAVKKFTKVAWPD-PTQFKEEAEG 119
+ +NI V + GE A V++ R E +AVK + A D F+ EA
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103
Query: 120 VGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTI-------------- 165
+ + + L+G C G L+ EYM L + L T+
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 166 ----EWPL----RLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217
PL +L +A +A + Y +E + ++ DL L E+ +++ FGL +
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYL-SERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 218 NSMDGKSYSTN------LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
N Y + + + PPE + R ES ++++G VL ++ S
Sbjct: 223 NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 110/277 (39%), Gaps = 28/277 (10%)
Query: 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRR 125
+F N +++ E + ++KGR + I VK W F EE +
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGND-IVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 126 KRLANLIGYCCA--GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDY 183
+ ++G C + L+ +MP +L L ++ ++ A +A + +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126
Query: 184 CNTEGRPLY--HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNGR 241
+T PL H LN+ V+ DED R+S +K S A+ PE L+
Sbjct: 127 LHTL-EPLIPRHALNSRSVMIDEDMTARIS-MADVKFSFQSPGRMYAPAWVAPEALQKK- 183
Query: 242 VIPESV------IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG---KFSS 292
PE ++SF +L +L++ + +P + N+ + M LEG
Sbjct: 184 --PEDTNRRSADMWSFAVLLWELVT-REVPFADL------SNMEIGMKVALEGLRPTIPP 234
Query: 293 EEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329
+ V L C+ +P +RP +V L ++Q K
Sbjct: 235 GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 26/254 (10%)
Query: 97 IAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCC--AGDERL-LVAEYMPNDT 152
+AVK + P + ++ E E + L + + G CC G++ + LV EY+P +
Sbjct: 41 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKG-CCEDQGEKSVQLVMEYVPLGS 99
Query: 153 LAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC 212
L +L + + L A I E + Y + + ++ L A VL D D ++
Sbjct: 100 LRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ-HYIHRALAARNVLLDNDRLVKIGD 155
Query: 213 FGLMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS----- 260
FGL K +G Y + + + PE LK + S ++SFG L +LL+
Sbjct: 156 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSN 215
Query: 261 -GKHIPPSHALDMIRGENLNLLMDSHLEGK----FSSEEATQVVGLASQCLQYEPRERPS 315
H + + +G+ L + LE ++ L C + E RP+
Sbjct: 216 QSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPT 275
Query: 316 TKNLVVTLARLQTK 329
+NLV L Q K
Sbjct: 276 FQNLVPILQTAQEK 289
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL-RV--------- 173
+ K + NL+G C ++ EY L ++L +E + RV
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 174 ----AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYST 227
+ +A ++Y ++ + ++ DL A VL E+ +++ FGL + N++D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLM 282
N + + PE L + +S ++SFG ++ ++ + P P ++ E LL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELFKLLK 273
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
+ H K + ++ + C P +RP+ K LV L R+ T
Sbjct: 274 EGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 26/254 (10%)
Query: 97 IAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCC--AGDERL-LVAEYMPNDT 152
+AVK + P + ++ E E + L + + G CC G++ + LV EY+P +
Sbjct: 40 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKG-CCEDQGEKSVQLVMEYVPLGS 98
Query: 153 LAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC 212
L +L + + L A I E + Y + + ++ L A VL D D ++
Sbjct: 99 LRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ-HYIHRALAARNVLLDNDRLVKIGD 154
Query: 213 FGLMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS----- 260
FGL K +G Y + + + PE LK + S ++SFG L +LL+
Sbjct: 155 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSN 214
Query: 261 -GKHIPPSHALDMIRGENLNLLMDSHLEGK----FSSEEATQVVGLASQCLQYEPRERPS 315
H + + +G+ L + LE ++ L C + E RP+
Sbjct: 215 QSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPT 274
Query: 316 TKNLVVTLARLQTK 329
+NLV L Q K
Sbjct: 275 FQNLVPILQTAQEK 288
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 114/265 (43%), Gaps = 22/265 (8%)
Query: 79 GEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQ-------FKEEAEGVGKLRRKRLAN 130
G+ +V+KGRL +++ +A+K T+ F+ E + L +
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 131 LIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRP 190
L Y + +V E++P L L + I+W ++LR+ IA ++Y + P
Sbjct: 88 L--YGLMHNPPRMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 191 LYH-DL---NAYRVLFDEDGD--PRLSCFGLMKNSMDGKS-YSTNLAYTPPEYL--KNGR 241
+ H DL N + DE+ +++ FGL + S+ S N + PE + +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 242 VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301
++ YSF +L +L+G+ ++ I+ +N++ + L + ++ +
Sbjct: 205 YTEKADTYSFAMILYTILTGEGPFDEYSYGKIK--FINMIREEGLRPTIPEDCPPRLRNV 262
Query: 302 ASQCLQYEPRERPSTKNLVVTLARL 326
C +P++RP +V L+ L
Sbjct: 263 IELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 77 ESGEKAANVVYKGRLEN------RQWIAVKKFTKVAWPDPT-----QFKEEAEGVGKLRR 125
E GE A V+ N + +AVK A DPT F+ EAE + L+
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVK-----ALKDPTLAARKDFQREAELLTNLQH 76
Query: 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLF--------------HWEKQTIEWPLRL 171
+ + G C GD ++V EYM + L K L K + L
Sbjct: 77 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+A IA + Y ++ ++ DL L + ++ FG+ ++ Y
Sbjct: 137 HIASQIASGMVYLASQ-HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
+ + PPE + + ES ++SFG +L ++ +
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 44 VQPTNEEAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVK-KF 102
V P E P + F ATN S D +V +GE + +L +++ I+V K
Sbjct: 23 VDPHTYEDPTQTVHEFAKELDATN-ISIDKVVG-AGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 103 TKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHW 160
KV + + + F EA +G+ + L G ++V EYM N +L L
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140
Query: 161 EKQ--TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218
+ Q I+ LR IA + Y + G ++ DL A +L + + ++S FGL +
Sbjct: 141 DAQFTVIQLVGMLR---GIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 219 SMDG--KSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
D +Y+T + +T PE + + S ++S+G VL +++S
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 44 VQPTNEEAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVK-KF 102
V P E P + F ATN S D +V +GE + +L +++ I+V K
Sbjct: 23 VDPHTYEDPTQTVHEFAKELDATN-ISIDKVVG-AGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 103 TKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHW 160
KV + + + F EA +G+ + L G ++V EYM N +L L
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140
Query: 161 EKQ--TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218
+ Q I+ LR IA + Y + G ++ DL A +L + + ++S FGL +
Sbjct: 141 DAQFTVIQLVGMLR---GIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 219 SMDG--KSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
D +Y+T + +T PE + + S ++S+G VL +++S
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+V G V+ G +AVK + + P F EA + +L+ +RL L
Sbjct: 13 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRL-- 69
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
Y E + ++ EYM N +L L + L +A IAE + + E ++
Sbjct: 70 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIH 128
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
+L A +L + +++ FGL + D + + + +T PE + G +S
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 248 IYSFGTVLLDLLSGKHIP 265
++SFG +L ++++ IP
Sbjct: 189 VWSFGILLTEIVTHGRIP 206
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 44 VQPTNEEAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVK-KF 102
V P E P + F ATN S D +V +GE + +L +++ I+V K
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATN-ISIDKVVG-AGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 103 TKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHW 160
KV + + + F EA +G+ + L G ++V EYM N +L L
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140
Query: 161 EKQ--TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218
+ Q I+ LR IA + Y + G ++ DL A +L + + ++S FGL +
Sbjct: 141 DAQFTVIQLVGMLR---GIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLARV 196
Query: 219 SMDG--KSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
D +Y+T + +T PE + + S ++S+G VL +++S
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 44 VQPTNEEAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVK-KF 102
V P E P + F ATN S D +V +GE + +L +++ I+V K
Sbjct: 21 VDPHTYEDPTQTVHEFAKELDATN-ISIDKVVG-AGEFGEVCSGRLKLPSKKEISVAIKT 78
Query: 103 TKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHW 160
KV + + + F EA +G+ + L G ++V EYM N +L L
Sbjct: 79 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 138
Query: 161 EKQ--TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218
+ Q I+ LR IA + Y + G ++ DL A +L + + ++S FGL +
Sbjct: 139 DAQFTVIQLVGMLR---GIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRV 194
Query: 219 SMDG--KSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
D +Y+T + +T PE + + S ++S+G VL +++S
Sbjct: 195 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 44 VQPTNEEAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVK-KF 102
V P E P + F ATN S D +V +GE + +L +++ I+V K
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATN-ISIDKVVG-AGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 103 TKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHW 160
KV + + + F EA +G+ + L G ++V EYM N +L L
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140
Query: 161 EKQ--TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218
+ Q I+ LR IA + Y + G ++ DL A +L + + ++S FGL +
Sbjct: 141 DAQFTVIQLVGMLR---GIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 219 SMDG--KSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
D +Y+T + +T PE + + S ++S+G VL +++S
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 44 VQPTNEEAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVK-KF 102
V P E P + F ATN S D +V +GE + +L +++ I+V K
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATN-ISIDKVVG-AGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 103 TKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHW 160
KV + + + F EA +G+ + L G ++V EYM N +L L
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140
Query: 161 EKQ--TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218
+ Q I+ LR IA + Y + G ++ DL A +L + + ++S FGL +
Sbjct: 141 DAQFTVIQLVGMLR---GIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 219 SMDG--KSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
D +Y+T + +T PE + + S ++S+G VL +++S
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 75 VSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLI 132
+ + GE VVYK + + +A+K+ A + P+ E + +L + +LI
Sbjct: 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI 85
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFY-IAEALDYCNTEGRPL 191
+ LV E+M D L K L E +T ++++ Y + + +C+ + R L
Sbjct: 86 DVIHSERCLTLVFEFMEKD-LKKVLD--ENKTGLQDSQIKIYLYQLLRGVAHCH-QHRIL 141
Query: 192 YHDLNAYRVLFDEDGDPRLSCFGLMKN-SMDGKSYS---TNLAYTPPEYLKNGRVIPESV 247
+ DL +L + DG +L+ FGL + + +SY+ L Y P+ L + SV
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSV 201
Query: 248 -IYSFGTVLLDLLSGKHIPPS 267
I+S G + ++++GK + P
Sbjct: 202 DIWSIGCIFAEMITGKPLFPG 222
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 75 VSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLI 132
+ + GE VVYK + + +A+K+ A + P+ E + +L + +LI
Sbjct: 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI 85
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFY-IAEALDYCNTEGRPL 191
+ LV E+M D L K L E +T ++++ Y + + +C+ + R L
Sbjct: 86 DVIHSERCLTLVFEFMEKD-LKKVLD--ENKTGLQDSQIKIYLYQLLRGVAHCH-QHRIL 141
Query: 192 YHDLNAYRVLFDEDGDPRLSCFGLMKN-SMDGKSYS---TNLAYTPPEYLKNGRVIPESV 247
+ DL +L + DG +L+ FGL + + +SY+ L Y P+ L + SV
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSV 201
Query: 248 -IYSFGTVLLDLLSGKHIPPS 267
I+S G + ++++GK + P
Sbjct: 202 DIWSIGCIFAEMITGKPLFPG 222
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL-RV--------- 173
+ K + +L+G C ++ EY L ++L +E+ + RV
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 174 ----AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYST 227
+ +A ++Y ++ + ++ DL A VL E+ +++ FGL + N++D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLM 282
N + + PE L + +S ++SFG ++ ++ + P P ++ E LL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELFKLLK 273
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
+ H K + ++ + C P +RP+ K LV L R+ T
Sbjct: 274 EGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 44 VQPTNEEAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVK-KF 102
V P E P + F ATN S D +V +GE + +L +++ I+V K
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATN-ISIDKVVG-AGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 103 TKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHW 160
KV + + + F EA +G+ + L G ++V EYM N +L L
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140
Query: 161 EKQ--TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218
+ Q I+ LR IA + Y + G ++ DL A +L + + ++S FGL +
Sbjct: 141 DAQFTVIQLVGMLR---GIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLGRV 196
Query: 219 SMDG--KSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
D +Y+T + +T PE + + S ++S+G VL +++S
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL-RV--------- 173
+ K + NL+G C ++ Y L ++L +E+ + RV
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 174 ----AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYST 227
+ +A ++Y ++ + ++ DL A VL E+ +++ FGL + N++D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLM 282
N + + PE L + +S ++SFG ++ ++ + P P ++ E LL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELFKLLK 273
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
+ H K + ++ + C P +RP+ K LV L R+ T
Sbjct: 274 EGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 44 VQPTNEEAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVK-KF 102
V P E P + F ATN S D +V +GE + +L +++ I+V K
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATN-ISIDKVVG-AGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 103 TKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHW 160
KV + + + F EA +G+ + L G ++V EYM N +L L
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140
Query: 161 EKQ--TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218
+ Q I+ LR IA + Y + G ++ DL A +L + + ++S FGL +
Sbjct: 141 DAQFTVIQLVGMLR---GIASGMKYLSDMGF-VHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 219 SMDG--KSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
D +Y+T + +T PE + + S ++S+G VL +++S
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL-RV--------- 173
+ K + L+G C ++ EY L ++L +E+ + RV
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 174 ----AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYST 227
+ +A ++Y ++ + ++ DL A VL E+ +++ FGL + N++D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLM 282
N + + PE L + +S ++SFG ++ ++ + P P ++ E LL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELFKLLK 273
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
+ H K + ++ + C P +RP+ K LV L R+ T
Sbjct: 274 EGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---------KSYST 227
+ E L+Y + G+ ++ D+ A +L EDG +++ FG+ G K++
Sbjct: 130 VLEGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 228 NLAYTPPEYLKNGRVIP-ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD-SH 285
+ PE ++ R ++ I+SFG ++L +G P H ++ L L D
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGA--APYHKYPPMKVLMLTLQNDPPS 246
Query: 286 LEGKFSSEEATQVVG-----LASQCLQYEPRERPSTKNLV 320
LE +E + G + S CLQ +P +RP+ L+
Sbjct: 247 LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---------KSYST 227
+ E L+Y + G+ ++ D+ A +L EDG +++ FG+ G K++
Sbjct: 125 VLEGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 228 NLAYTPPEYLKNGRVIP-ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD-SH 285
+ PE ++ R ++ I+SFG ++L +G P H ++ L L D
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGA--APYHKYPPMKVLMLTLQNDPPS 241
Query: 286 LEGKFSSEEATQVVG-----LASQCLQYEPRERPSTKNLV 320
LE +E + G + S CLQ +P +RP+ L+
Sbjct: 242 LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL-RV--------- 173
+ K + NL+G C ++ Y L ++L +E+ + RV
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 174 ----AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYST 227
+ +A ++Y ++ + ++ DL A VL E+ +++ FGL + N++D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLM 282
N + + PE L + +S ++SFG ++ ++ + P P ++ E LL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELFKLLK 273
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
+ H K + ++ + C P +RP+ K LV L R+ T
Sbjct: 274 EGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 113/265 (42%), Gaps = 22/265 (8%)
Query: 79 GEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQ-------FKEEAEGVGKLRRKRLAN 130
G+ +V+KGRL +++ +A+K T+ F+ E + L +
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 131 LIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRP 190
L Y + +V E++P L L + I+W ++LR+ IA ++Y + P
Sbjct: 88 L--YGLMHNPPRMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 191 LYH-DL---NAYRVLFDEDGD--PRLSCFGLMKNSMDGKS-YSTNLAYTPPEYL--KNGR 241
+ H DL N + DE+ +++ FG + S+ S N + PE + +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 242 VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301
++ YSF +L +L+G+ ++ I+ +N++ + L + ++ +
Sbjct: 205 YTEKADTYSFAMILYTILTGEGPFDEYSYGKIK--FINMIREEGLRPTIPEDCPPRLRNV 262
Query: 302 ASQCLQYEPRERPSTKNLVVTLARL 326
C +P++RP +V L+ L
Sbjct: 263 IELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVK-KFTKVAWPDPTQ--FKEEAEGVGKLR 124
N S D +V +GE + +L +++ I+V K KV + + + F EA +G+
Sbjct: 17 NISIDKVVG-AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 125 RKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQ--TIEWPLRLRVAFYIAEALD 182
+ L G ++V EYM N +L L + Q I+ LR IA +
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 132
Query: 183 YCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KSYSTN-----LAYTPPE 235
Y + G ++ DL A +L + + ++S FGL + D +Y+T + +T PE
Sbjct: 133 YLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLS 260
+ + S ++S+G VL +++S
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVK-KFTKVAWPDPTQ--FKEEAEGVGKLR 124
N S D +V +GE + +L +++ I+V K KV + + + F EA +G+
Sbjct: 34 NISIDKVVG-AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 92
Query: 125 RKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQ--TIEWPLRLRVAFYIAEALD 182
+ L G ++V EYM N +L L + Q I+ LR IA +
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 149
Query: 183 YCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KSYSTN-----LAYTPPE 235
Y + G ++ DL A +L + + ++S FGL + D +Y+T + +T PE
Sbjct: 150 YLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 208
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLS 260
+ + S ++S+G VL +++S
Sbjct: 209 AIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 113/265 (42%), Gaps = 22/265 (8%)
Query: 79 GEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQ-------FKEEAEGVGKLRRKRLAN 130
G+ +V+KGRL +++ +A+K T+ F+ E + L +
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 131 LIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRP 190
L Y + +V E++P L L + I+W ++LR+ IA ++Y + P
Sbjct: 88 L--YGLMHNPPRMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 191 LYH-DL---NAYRVLFDEDGD--PRLSCFGLMKNSMDGKS-YSTNLAYTPPEYL--KNGR 241
+ H DL N + DE+ +++ F L + S+ S N + PE + +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 242 VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301
++ YSF +L +L+G+ ++ I+ +N++ + L + ++ +
Sbjct: 205 YTEKADTYSFAMILYTILTGEGPFDEYSYGKIK--FINMIREEGLRPTIPEDCPPRLRNV 262
Query: 302 ASQCLQYEPRERPSTKNLVVTLARL 326
C +P++RP +V L+ L
Sbjct: 263 IELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 21/190 (11%)
Query: 109 DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWP 168
D K E + +++ + +LI G + L+ EY+ L L E++ I
Sbjct: 64 DTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIF-- 118
Query: 169 LRLRVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM-DG-- 222
+ FY+AE AL + + +G +Y DL ++ + G +L+ FGL K S+ DG
Sbjct: 119 MEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV 177
Query: 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLL 281
++ + Y PE L +S G ++ D+L+G PP GEN
Sbjct: 178 THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA--PP------FTGENRKKT 229
Query: 282 MDSHLEGKFS 291
+D L+ K +
Sbjct: 230 IDKILKCKLN 239
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 137 AGDERLLVAEYMPNDTLAKHLFHW---EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH 193
GDE +V E++ L + H E+Q V + +AL + +G ++
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQGV-IHR 271
Query: 194 DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIY 249
D+ + +L DG +LS FG L TP PE + PE I+
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 331
Query: 250 SFGTVLLDLLSGK----HIPPSHALDMIR 274
S G ++++++ G+ + PP A+ MIR
Sbjct: 332 SLGIMVIEMVDGEPPYFNEPPLKAMKMIR 360
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 31/221 (14%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+ K E + + R + L + +V EY+ L ++ + +E
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEAR 114
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA- 230
R+ I A+DYC+ ++ DL VL D + +++ FGL DG+ T+
Sbjct: 115 RLFQQILSAVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGS 173
Query: 231 --YTPPEYLKNGRVI--PESVIYSFGTVLLDLLSG------KHIPPSHALDMIRGENLNL 280
Y PE + +GR+ PE I+S G +L LL G +H+P IRG
Sbjct: 174 PNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT--LFKKIRG----- 225
Query: 281 LMDSHLEGKFSSEEATQ--VVGLASQCLQYEPRERPSTKNL 319
G F E V L LQ +P +R + K++
Sbjct: 226 -------GVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 30/238 (12%)
Query: 50 EAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRL------ENRQWIAVKKFT 103
E PL ++ L+ + S+ + E GE VYKG L E Q +A+K
Sbjct: 8 EMPLINQHKQAKLKEIS--LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK 65
Query: 104 -KVAWPDPTQFKEEAEGVGKLRRKRLANLIG-------------YCCAGD-ERLLVAEYM 148
K P +F+ EA +L+ + L+G YC GD LV
Sbjct: 66 DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSP 125
Query: 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDP 208
+D + K +E P + + IA ++Y ++ ++ DL VL + +
Sbjct: 126 HSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKLNV 184
Query: 209 RLSCFGLMKNSMDGKSYST------NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
++S GL + Y + + PE + G+ +S I+S+G VL ++ S
Sbjct: 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN-SMDGK--SYSTNLAYTP 233
I A+ YC+ + R ++ DL A +L D D + +++ FG ++ GK ++ + Y
Sbjct: 120 IVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAA 178
Query: 234 PEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF 290
PE + + PE ++S G +L L+SG S D G+NL L + L GK+
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 228
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 137 AGDERLLVAEYMPNDTLAKHLFHW---EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH 193
GDE +V E++ L + H E+Q V + +AL + +G ++
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQGV-IHR 149
Query: 194 DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIY 249
D+ + +L DG +LS FG L TP PE + PE I+
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 209
Query: 250 SFGTVLLDLLSGK----HIPPSHALDMIR 274
S G ++++++ G+ + PP A+ MIR
Sbjct: 210 SLGIMVIEMVDGEPPYFNEPPLKAMKMIR 238
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 137 AGDERLLVAEYMPNDTLAKHLFHW---EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH 193
GDE +V E++ L + H E+Q V + +AL + +G ++
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQGV-IHR 151
Query: 194 DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIY 249
D+ + +L DG +LS FG L TP PE + PE I+
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 211
Query: 250 SFGTVLLDLLSGK----HIPPSHALDMIR 274
S G ++++++ G+ + PP A+ MIR
Sbjct: 212 SLGIMVIEMVDGEPPYFNEPPLKAMKMIR 240
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 137 AGDERLLVAEYMPNDTLAKHLFHW---EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH 193
GDE +V E++ L + H E+Q V + +AL + +G ++
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQGV-IHR 140
Query: 194 DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIY 249
D+ + +L DG +LS FG L TP PE + PE I+
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 200
Query: 250 SFGTVLLDLLSGK----HIPPSHALDMIR 274
S G ++++++ G+ + PP A+ MIR
Sbjct: 201 SLGIMVIEMVDGEPPYFNEPPLKAMKMIR 229
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 137 AGDERLLVAEYMPNDTLAKHLFHW---EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH 193
GDE +V E++ L + H E+Q V + +AL + +G ++
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQGV-IHR 194
Query: 194 DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIY 249
D+ + +L DG +LS FG L TP PE + PE I+
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 254
Query: 250 SFGTVLLDLLSGK----HIPPSHALDMIR 274
S G ++++++ G+ + PP A+ MIR
Sbjct: 255 SLGIMVIEMVDGEPPYFNEPPLKAMKMIR 283
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 109 DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWP 168
D K E + +++ + +LI G + L+ EY+ L L E++ I
Sbjct: 64 DTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIF-- 118
Query: 169 LRLRVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM-DG-- 222
+ FY+AE AL + + +G +Y DL ++ + G +L+ FGL K S+ DG
Sbjct: 119 MEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV 177
Query: 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLL 281
+ + Y PE L +S G ++ D+L+G PP GEN
Sbjct: 178 THXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA--PP------FTGENRKKT 229
Query: 282 MDSHLEGKFS 291
+D L+ K +
Sbjct: 230 IDKILKCKLN 239
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 134 YCC--AGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEG 188
+CC D V E++ L +FH +K R R FY AE AL + + +G
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARAR--FYAAEIISALMFLHDKG 144
Query: 189 RPLYHDLNAYRVLFDEDGDPRLSCFGLMK----NSMDGKSYSTNLAYTPPEYLKNGRVIP 244
+Y DL VL D +G +L+ FG+ K N + ++ Y PE L+ P
Sbjct: 145 I-IYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGP 203
Query: 245 ESVIYSFGTVLLDLLSGKHIP 265
++ G +L ++L G H P
Sbjct: 204 AVDWWAMGVLLYEMLCG-HAP 223
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 137 AGDERLLVAEYMPNDTLAKHLFHW---EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH 193
GDE +V E++ L + H E+Q V + +AL + +G ++
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQGV-IHR 144
Query: 194 DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIY 249
D+ + +L DG +LS FG L TP PE + PE I+
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 204
Query: 250 SFGTVLLDLLSGK----HIPPSHALDMIR 274
S G ++++++ G+ + PP A+ MIR
Sbjct: 205 SLGIMVIEMVDGEPPYFNEPPLKAMKMIR 233
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 13/118 (11%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN-SMDGK--SYSTNLAYTP 233
I A+ YC+ + R ++ DL A +L D D + +++ FG ++ GK ++ Y
Sbjct: 123 IVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAA 181
Query: 234 PEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF 290
PE + + PE ++S G +L L+SG S D G+NL L + L GK+
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 231
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 18/229 (7%)
Query: 44 VQPTNEEAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVK-KF 102
V P E P + F ATN S D +V +GE + +L +++ I+V K
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATN-ISIDKVVG-AGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 103 TKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHW 160
KV + + + F EA +G+ + L G ++V E M N +L L
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH 140
Query: 161 EKQ--TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218
+ Q I+ LR IA + Y + G ++ DL A +L + + ++S FGL +
Sbjct: 141 DAQFTVIQLVGMLR---GIASGMKYLSDMG-AVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 219 SMDG--KSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
D +Y+T + +T PE + + S ++S+G VL +++S
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY L FH ++ + R R FY AE AL+Y ++ +Y D+
Sbjct: 81 DRLCFVMEYANGGEL---FFHLSRERVFTEERAR--FYGAEIVSALEYLHSRD-VVYRDI 134
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSM-DG---KSYSTNLAYTPPEYLKN---GRVIPESVI 248
++ D+DG +++ FGL K + DG K++ Y PE L++ GR +
Sbjct: 135 KLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVD---W 191
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+ G V+ +++ G+ P + D R L L+ + S E + + GL L+
Sbjct: 192 WGLGVVMYEMMCGR--LPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL----LKK 245
Query: 309 EPRER 313
+P++R
Sbjct: 246 DPKQR 250
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 18/229 (7%)
Query: 44 VQPTNEEAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVK-KF 102
V P E P + F ATN S D +V +GE + +L +++ I+V K
Sbjct: 23 VDPHTYEDPTQTVHEFAKELDATN-ISIDKVVG-AGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 103 TKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHW 160
KV + + + F EA +G+ + L G ++V E M N +L L
Sbjct: 81 LKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH 140
Query: 161 EKQ--TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218
+ Q I+ LR IA + Y + G ++ DL A +L + + ++S FGL +
Sbjct: 141 DAQFTVIQLVGMLR---GIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 219 SMDG--KSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
D +Y+T + +T PE + + S ++S+G VL +++S
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY L FH ++ + R R FY AE AL+Y ++ +Y D+
Sbjct: 78 DRLCFVMEYANGGEL---FFHLSRERVFTEERAR--FYGAEIVSALEYLHSRD-VVYRDI 131
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSM-DG---KSYSTNLAYTPPEYLKN---GRVIPESVI 248
++ D+DG +++ FGL K + DG K++ Y PE L++ GR +
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVD---W 188
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+ G V+ +++ G+ P + D R L L+ + S E + + GL L+
Sbjct: 189 WGLGVVMYEMMCGR--LPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL----LKK 242
Query: 309 EPRER 313
+P++R
Sbjct: 243 DPKQR 247
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 113/292 (38%), Gaps = 43/292 (14%)
Query: 73 NIVSESGEKAANVVYKGRLENRQ------WIAVKKFTKV-AWPDPTQFKEEAEGVGKLRR 125
++ G A VY+G++ +AVK +V + D F EA + KL
Sbjct: 34 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNH 93
Query: 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR---------LRVAFY 176
+ + IG R ++ E M L L ++T P + L VA
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 149
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC---FGLMKNSMDGKSYSTN----- 228
IA Y E ++ D+ A L G R++ FG+ ++ Y
Sbjct: 150 IACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 229 -LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHL 286
+ + PPE G ++ +SFG +L ++ S ++P PS + N +L
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTS 261
Query: 287 EGKFSSEE--ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
G+ + V + +QC Q++P +RP N + L R++ + P +
Sbjct: 262 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRP---NFAIILERIEYCTQDPDVI 310
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 88/220 (40%), Gaps = 28/220 (12%)
Query: 68 NFSSDNIVSESGEKAANVVYKGRL------ENRQWIAVKKFT-KVAWPDPTQFKEEAEGV 120
+ S+ + E GE VYKG L E Q +A+K K P +F+ EA
Sbjct: 7 SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLR 66
Query: 121 GKLRRKRLANLIG-------------YCCAGD-ERLLVAEYMPNDTLAKHLFHWEKQTIE 166
+L+ + L+G YC GD LV +D + K +E
Sbjct: 67 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 126
Query: 167 WPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYS 226
P + + IA ++Y ++ ++ DL VL + + ++S GL + Y
Sbjct: 127 PPDFVHLVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK 185
Query: 227 T------NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
+ + PE + G+ +S I+S+G VL ++ S
Sbjct: 186 LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY L FH ++ + R R FY AE AL+Y ++ +Y D+
Sbjct: 78 DRLCFVMEYANGGEL---FFHLSRERVFTEERAR--FYGAEIVSALEYLHSRD-VVYRDI 131
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSM-DG---KSYSTNLAYTPPEYLKN---GRVIPESVI 248
++ D+DG +++ FGL K + DG K++ Y PE L++ GR +
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVD---W 188
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+ G V+ +++ G+ P + D R L L+ + S E + + GL L+
Sbjct: 189 WGLGVVMYEMMCGR--LPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL----LKK 242
Query: 309 EPRER 313
+P++R
Sbjct: 243 DPKQR 247
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 93/211 (44%), Gaps = 14/211 (6%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQ-FKEEAEGVGKLRRKRLANLI 132
IV E G+ A VYK + + +A K + + + + E E + + L+
Sbjct: 23 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 82
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G + ++ E+ P + + ++ E +++ V + EAL++ +++ R ++
Sbjct: 83 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSK-RIIH 140
Query: 193 HDLNAYRVLFDEDGDPRLSCFGL---------MKNSMDGKSYSTNLAYTPPEYLKNGRVI 243
DL A VL +GD RL+ FG+ ++S G Y E +K+
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 200
Query: 244 PESVIYSFGTVLLDLLSGKHIPPSHALDMIR 274
++ I+S G L+++ + PP H L+ +R
Sbjct: 201 YKADIWSLGITLIEMAQIE--PPHHELNPMR 229
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 113/292 (38%), Gaps = 43/292 (14%)
Query: 73 NIVSESGEKAANVVYKGRLENRQ------WIAVKKFTKV-AWPDPTQFKEEAEGVGKLRR 125
++ G A VY+G++ +AVK +V + D F EA + KL
Sbjct: 48 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNH 107
Query: 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR---------LRVAFY 176
+ + IG R ++ E M L L ++T P + L VA
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 163
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC---FGLMKNSMDGKSYSTN----- 228
IA Y E ++ D+ A L G R++ FG+ ++ Y
Sbjct: 164 IACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 229 -LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHL 286
+ + PPE G ++ +SFG +L ++ S ++P PS + N +L
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTS 275
Query: 287 EGKFSSEE--ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
G+ + V + +QC Q++P +RP N + L R++ + P +
Sbjct: 276 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRP---NFAIILERIEYCTQDPDVI 324
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 14/211 (6%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQ-FKEEAEGVGKLRRKRLANLI 132
IV E G+ A VYK + + +A K + + + + E E + + L+
Sbjct: 15 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 74
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G + ++ E+ P + + ++ E P V + EAL++ +++ R ++
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE-PQIQVVCRQMLEALNFLHSK-RIIH 132
Query: 193 HDLNAYRVLFDEDGDPRLSCFGL---------MKNSMDGKSYSTNLAYTPPEYLKNGRVI 243
DL A VL +GD RL+ FG+ ++S G Y E +K+
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 192
Query: 244 PESVIYSFGTVLLDLLSGKHIPPSHALDMIR 274
++ I+S G L+++ + PP H L+ +R
Sbjct: 193 YKADIWSLGITLIEMAQIE--PPHHELNPMR 221
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 112/292 (38%), Gaps = 43/292 (14%)
Query: 73 NIVSESGEKAANVVYKGRLENRQ------WIAVKKFTKV-AWPDPTQFKEEAEGVGKLRR 125
++ G A VY+G++ +AVK +V + D F EA + K
Sbjct: 60 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 119
Query: 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR---------LRVAFY 176
+ + IG R ++ E M L L ++T P + L VA
Sbjct: 120 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 175
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC---FGLMKNSMDGKSYSTN----- 228
IA Y E ++ D+ A L G R++ FG+ ++ Y
Sbjct: 176 IACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 234
Query: 229 -LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHL 286
+ + PPE G ++ +SFG +L ++ S ++P PS + N +L
Sbjct: 235 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTS 287
Query: 287 EGKFSSEE--ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
G+ + V + +QC Q++P +RP N + L R++ + P +
Sbjct: 288 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRP---NFAIILERIEYCTQDPDVI 336
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY L FH ++ + R R FY AE AL+Y ++ +Y D+
Sbjct: 78 DRLCFVMEYANGGEL---FFHLSRERVFTEERAR--FYGAEIVSALEYLHSRD-VVYRDI 131
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSM-DG---KSYSTNLAYTPPEYLKN---GRVIPESVI 248
++ D+DG +++ FGL K + DG K + Y PE L++ GR +
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVD---W 188
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+ G V+ +++ G+ P + D R L L+ + S E + + GL L+
Sbjct: 189 WGLGVVMYEMMCGR--LPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL----LKK 242
Query: 309 EPRER 313
+P++R
Sbjct: 243 DPKQR 247
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY L FH ++ + R R FY AE AL+Y ++ +Y D+
Sbjct: 78 DRLCFVMEYANGGEL---FFHLSRERVFTEERAR--FYGAEIVSALEYLHSRD-VVYRDI 131
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSM-DG---KSYSTNLAYTPPEYLKN---GRVIPESVI 248
++ D+DG +++ FGL K + DG K + Y PE L++ GR +
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVD---W 188
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+ G V+ +++ G+ P + D R L L+ + S E + + GL L+
Sbjct: 189 WGLGVVMYEMMCGR--LPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL----LKK 242
Query: 309 EPRER 313
+P++R
Sbjct: 243 DPKQR 247
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY L FH ++ + R R FY AE AL+Y ++ +Y D+
Sbjct: 83 DRLCFVMEYANGGEL---FFHLSRERVFTEERAR--FYGAEIVSALEYLHSRD-VVYRDI 136
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSM-DG---KSYSTNLAYTPPEYLKN---GRVIPESVI 248
++ D+DG +++ FGL K + DG K + Y PE L++ GR +
Sbjct: 137 KLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVD---W 193
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+ G V+ +++ G+ P + D R L L+ + S E + + GL L+
Sbjct: 194 WGLGVVMYEMMCGR--LPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL----LKK 247
Query: 309 EPRER 313
+P++R
Sbjct: 248 DPKQR 252
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 8/135 (5%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAK---HLFHWEKQ-TIEWP 168
FK E + + ++ + G DE ++ EYM ND++ K + F +K T P
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 169 LRLR--VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYS 226
+++ + + + Y + E + D+ +L D++G +LS FG + +D K
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKG 209
Query: 227 TNLAY--TPPEYLKN 239
+ Y PPE+ N
Sbjct: 210 SRGTYEFMPPEFFSN 224
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 108/286 (37%), Gaps = 43/286 (15%)
Query: 79 GEKAANVVYKGRLENRQ------WIAVKKFTKV-AWPDPTQFKEEAEGVGKLRRKRLANL 131
G A VY+G++ +AVK +V + D F EA + K + +
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 99
Query: 132 IGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR---------LRVAFYIAEALD 182
IG R ++ E M L L ++T P + L VA IA
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 183 YCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD---------GKSYSTNLAYTP 233
Y E ++ D+ A L G R++ G + D G + + P
Sbjct: 156 YLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 234 PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHLEGKFSS 292
PE G ++ +SFG +L ++ S ++P PS + N +L G+
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDP 267
Query: 293 EE--ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
+ V + +QC Q++P +RP N + L R++ + P +
Sbjct: 268 PKNCPGPVYRIMTQCWQHQPEDRP---NFAIILERIEYCTQDPDVI 310
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY L FH ++ + R R FY AE AL+Y ++ +Y D+
Sbjct: 78 DRLCFVMEYANGGEL---FFHLSRERVFTEERAR--FYGAEIVSALEYLHSRD-VVYRDI 131
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSM-DG---KSYSTNLAYTPPEYLKN---GRVIPESVI 248
++ D+DG +++ FGL K + DG K + Y PE L++ GR +
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVD---W 188
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+ G V+ +++ G+ P + D R L L+ + S E + + GL L+
Sbjct: 189 WGLGVVMYEMMCGR--LPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL----LKK 242
Query: 309 EPRER 313
+P++R
Sbjct: 243 DPKQR 247
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVK-KFTKVAWPDPTQ--FKEEAEGVGKLR 124
N S D +V +GE + +L +++ I+V K KV + + + F EA +G+
Sbjct: 17 NISIDKVVG-AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 125 RKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQ--TIEWPLRLRVAFYIAEALD 182
+ L G ++V E M N +L L + Q I+ LR IA +
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 132
Query: 183 YCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KSYSTN-----LAYTPPE 235
Y + G ++ DL A +L + + ++S FGL + D +Y+T + +T PE
Sbjct: 133 YLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLS 260
+ + S ++S+G VL +++S
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
D+RL + EY+ TL + + Q W R+ A IA + Y ++ ++ DLN+
Sbjct: 79 DKRLNFITEYIKGGTLRGIIKSMDSQY-PWSQRVSFAKDIASGMAYLHSMN-IIHRDLNS 136
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKS----------------YST--NLAYTPPEYLKN 239
+ L E+ + ++ FGL + +D K+ Y+ N + PE + N
Sbjct: 137 HNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI-N 195
Query: 240 GRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298
GR E V ++SFG VL +++ + P + + R + L + L+
Sbjct: 196 GRSYDEKVDVFSFGIVLCEIIGRVNADPDY---LPRTMDFGLNVRGFLDRYCPPNCPPSF 252
Query: 299 VGLASQCLQYEPRERPSTKNL 319
+ +C +P +RPS L
Sbjct: 253 FPITVRCCDLDPEKRPSFVKL 273
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 112/292 (38%), Gaps = 43/292 (14%)
Query: 73 NIVSESGEKAANVVYKGRLENRQ------WIAVKKFTKV-AWPDPTQFKEEAEGVGKLRR 125
++ G A VY+G++ +AVK +V + D F EA + K
Sbjct: 34 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 93
Query: 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR---------LRVAFY 176
+ + IG R ++ E M L L ++T P + L VA
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 149
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC---FGLMKNSMDGKSYSTN----- 228
IA Y E ++ D+ A L G R++ FG+ ++ Y
Sbjct: 150 IACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 229 -LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHL 286
+ + PPE G ++ +SFG +L ++ S ++P PS + N +L
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTS 261
Query: 287 EGKFSSEE--ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
G+ + V + +QC Q++P +RP N + L R++ + P +
Sbjct: 262 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRP---NFAIILERIEYCTQDPDVI 310
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 112/292 (38%), Gaps = 43/292 (14%)
Query: 73 NIVSESGEKAANVVYKGRLENRQ------WIAVKKFTKV-AWPDPTQFKEEAEGVGKLRR 125
++ G A VY+G++ +AVK +V + D F EA + K
Sbjct: 48 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 107
Query: 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR---------LRVAFY 176
+ + IG R ++ E M L L ++T P + L VA
Sbjct: 108 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 163
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC---FGLMKNSMDGKSYSTN----- 228
IA Y E ++ D+ A L G R++ FG+ ++ Y
Sbjct: 164 IACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 229 -LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHL 286
+ + PPE G ++ +SFG +L ++ S ++P PS + N +L
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTS 275
Query: 287 EGKFSSEE--ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
G+ + V + +QC Q++P +RP N + L R++ + P +
Sbjct: 276 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRP---NFAIILERIEYCTQDPDVI 324
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 112/292 (38%), Gaps = 43/292 (14%)
Query: 73 NIVSESGEKAANVVYKGRLENRQ------WIAVKKFTKV-AWPDPTQFKEEAEGVGKLRR 125
++ G A VY+G++ +AVK +V + D F EA + K
Sbjct: 33 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 92
Query: 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR---------LRVAFY 176
+ + IG R ++ E M L L ++T P + L VA
Sbjct: 93 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 148
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC---FGLMKNSMDGKSYSTN----- 228
IA Y E ++ D+ A L G R++ FG+ ++ Y
Sbjct: 149 IACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 229 -LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHL 286
+ + PPE G ++ +SFG +L ++ S ++P PS + N +L
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTS 260
Query: 287 EGKFSSEE--ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
G+ + V + +QC Q++P +RP N + L R++ + P +
Sbjct: 261 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRP---NFAIILERIEYCTQDPDVI 309
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 112/292 (38%), Gaps = 43/292 (14%)
Query: 73 NIVSESGEKAANVVYKGRLENRQ------WIAVKKFTKV-AWPDPTQFKEEAEGVGKLRR 125
++ G A VY+G++ +AVK +V + D F EA + K
Sbjct: 50 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 109
Query: 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR---------LRVAFY 176
+ + IG R ++ E M L L ++T P + L VA
Sbjct: 110 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 165
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC---FGLMKNSMDGKSYSTN----- 228
IA Y E ++ D+ A L G R++ FG+ ++ Y
Sbjct: 166 IACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 224
Query: 229 -LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHL 286
+ + PPE G ++ +SFG +L ++ S ++P PS + N +L
Sbjct: 225 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTS 277
Query: 287 EGKFSSEE--ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
G+ + V + +QC Q++P +RP N + L R++ + P +
Sbjct: 278 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRP---NFAIILERIEYCTQDPDVI 326
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 88/221 (39%), Gaps = 31/221 (14%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+ K E + + R + L + +V EY+ L ++ + +E
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEAR 114
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA- 230
R+ I A+DYC+ ++ DL VL D + +++ FGL DG+ +
Sbjct: 115 RLFQQILSAVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGS 173
Query: 231 --YTPPEYLKNGRVI--PESVIYSFGTVLLDLLSG------KHIPPSHALDMIRGENLNL 280
Y PE + +GR+ PE I+S G +L LL G +H+P IRG
Sbjct: 174 PNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT--LFKKIRG----- 225
Query: 281 LMDSHLEGKFSSEEATQ--VVGLASQCLQYEPRERPSTKNL 319
G F E V L LQ +P +R + K++
Sbjct: 226 -------GVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 112/292 (38%), Gaps = 43/292 (14%)
Query: 73 NIVSESGEKAANVVYKGRLENRQ------WIAVKKFTKV-AWPDPTQFKEEAEGVGKLRR 125
++ G A VY+G++ +AVK +V + D F EA + K
Sbjct: 40 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 99
Query: 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR---------LRVAFY 176
+ + IG R ++ E M L L ++T P + L VA
Sbjct: 100 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 155
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC---FGLMKNSMDGKSYSTN----- 228
IA Y E ++ D+ A L G R++ FG+ ++ Y
Sbjct: 156 IACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 214
Query: 229 -LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHL 286
+ + PPE G ++ +SFG +L ++ S ++P PS + N +L
Sbjct: 215 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTS 267
Query: 287 EGKFSSEE--ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
G+ + V + +QC Q++P +RP N + L R++ + P +
Sbjct: 268 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRP---NFAIILERIEYCTQDPDVI 316
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 102/255 (40%), Gaps = 33/255 (12%)
Query: 89 GRLENRQWIAVKKFTKVAWPDPTQ--------FKEEAEGVGKLRRKRLANLIGYCCAGDE 140
G++ WI + K A DP + ++EA+ L+ + L G C
Sbjct: 21 GKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80
Query: 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG-RPLYH-DLNAY 198
LV E+ L + L + I + + A IA ++Y + E P+ H DL +
Sbjct: 81 LCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 199 RVLF---DEDGDP-----RLSCFGLMK--NSMDGKSYSTNLAYTPPEYLKNGRVIPESVI 248
+L E+GD +++ FGL + + S + A+ PE ++ S +
Sbjct: 138 NILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDV 197
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIR---GENLNLLMDSHLEGKFSSEEATQVVGLASQC 305
+S+G +L +LL+G+ P +D + G +N L S L C
Sbjct: 198 WSYGVLLWELLTGEV--PFRGIDGLAVAYGVAMN-----KLALPIPSTCPEPFAKLMEDC 250
Query: 306 LQYEPRERPSTKNLV 320
+P RPS N++
Sbjct: 251 WNPDPHSRPSFTNIL 265
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 112/292 (38%), Gaps = 43/292 (14%)
Query: 73 NIVSESGEKAANVVYKGRLENRQ------WIAVKKFTKV-AWPDPTQFKEEAEGVGKLRR 125
++ G A VY+G++ +AVK +V + D F EA + K
Sbjct: 33 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 92
Query: 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR---------LRVAFY 176
+ + IG R ++ E M L L ++T P + L VA
Sbjct: 93 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 148
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC---FGLMKNSMDGKSYSTN----- 228
IA Y E ++ D+ A L G R++ FG+ ++ Y
Sbjct: 149 IACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 229 -LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHL 286
+ + PPE G ++ +SFG +L ++ S ++P PS + N +L
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTS 260
Query: 287 EGKFSSEE--ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
G+ + V + +QC Q++P +RP N + L R++ + P +
Sbjct: 261 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRP---NFAIILERIEYCTQDPDVI 309
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 112/292 (38%), Gaps = 43/292 (14%)
Query: 73 NIVSESGEKAANVVYKGRLENRQ------WIAVKKFTKV-AWPDPTQFKEEAEGVGKLRR 125
++ G A VY+G++ +AVK +V + D F EA + K
Sbjct: 74 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 133
Query: 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR---------LRVAFY 176
+ + IG R ++ E M L L ++T P + L VA
Sbjct: 134 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 189
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC---FGLMKNSMDGKSYSTN----- 228
IA Y E ++ D+ A L G R++ FG+ ++ Y
Sbjct: 190 IACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 248
Query: 229 -LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHL 286
+ + PPE G ++ +SFG +L ++ S ++P PS + N +L
Sbjct: 249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTS 301
Query: 287 EGKFSSEE--ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
G+ + V + +QC Q++P +RP N + L R++ + P +
Sbjct: 302 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRP---NFAIILERIEYCTQDPDVI 350
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA---YTP 233
I +DYC+ ++ DL VL D + +++ FGL DG+ + Y
Sbjct: 125 ILSGVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAA 183
Query: 234 PEYLKNGRVI--PESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291
PE + +GR+ PE I+S G +L LL G +P +++ L +G F
Sbjct: 184 PEVI-SGRLYAGPEVDIWSSGVILYALLCGT-LP-------FDDDHVPTLFKKICDGIFY 234
Query: 292 SEEATQ--VVGLASQCLQYEPRERPSTKNL 319
+ + V+ L LQ +P +R + K++
Sbjct: 235 TPQYLNPSVISLLKHMLQVDPMKRATIKDI 264
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 112/292 (38%), Gaps = 43/292 (14%)
Query: 73 NIVSESGEKAANVVYKGRLENRQ------WIAVKKFTKV-AWPDPTQFKEEAEGVGKLRR 125
++ G A VY+G++ +AVK +V + D F EA + K
Sbjct: 25 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 84
Query: 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR---------LRVAFY 176
+ + IG R ++ E M L L ++T P + L VA
Sbjct: 85 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 140
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC---FGLMKNSMDGKSYSTN----- 228
IA Y E ++ D+ A L G R++ FG+ ++ Y
Sbjct: 141 IACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 199
Query: 229 -LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHL 286
+ + PPE G ++ +SFG +L ++ S ++P PS + N +L
Sbjct: 200 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTS 252
Query: 287 EGKFSSEE--ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
G+ + V + +QC Q++P +RP N + L R++ + P +
Sbjct: 253 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRP---NFAIILERIEYCTQDPDVI 301
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 112/291 (38%), Gaps = 43/291 (14%)
Query: 74 IVSESGEKAANVVYKGRLENRQ------WIAVKKFTKV-AWPDPTQFKEEAEGVGKLRRK 126
++ G A VY+G++ +AVK +V + D F EA + K +
Sbjct: 49 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQ 108
Query: 127 RLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR---------LRVAFYI 177
+ IG R ++ E M L L ++T P + L VA I
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARDI 164
Query: 178 AEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC---FGLMKNSMDGKSYSTN------ 228
A Y E ++ D+ A L G R++ FG+ ++ Y
Sbjct: 165 ACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHLE 287
+ + PPE G ++ +SFG +L ++ S ++P PS + N +L
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSG 276
Query: 288 GKFSSEE--ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
G+ + V + +QC Q++P +RP N + L R++ + P +
Sbjct: 277 GRMDPPKNCPGPVYRIMTQCWQHQPEDRP---NFAIILERIEYCTQDPDVI 324
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 110/292 (37%), Gaps = 43/292 (14%)
Query: 73 NIVSESGEKAANVVYKGRLENRQ------WIAVKKFTKV-AWPDPTQFKEEAEGVGKLRR 125
++ G A VY+G++ +AVK +V + D F EA + K
Sbjct: 51 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 110
Query: 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR---------LRVAFY 176
+ + IG R ++ E M L L ++T P + L VA
Sbjct: 111 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 166
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD---------GKSYST 227
IA Y E ++ D+ A L G R++ G + D G
Sbjct: 167 IACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 225
Query: 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHL 286
+ + PPE G ++ +SFG +L ++ S ++P PS + N +L
Sbjct: 226 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTS 278
Query: 287 EGKFSSEE--ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
G+ + V + +QC Q++P +RP N + L R++ + P +
Sbjct: 279 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRP---NFAIILERIEYCTQDPDVI 327
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 21/226 (9%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQ--TIEWPLR 170
F EA +G+ + +L G +++ E+M N +L L + Q I+
Sbjct: 81 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 140
Query: 171 LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL---MKNSMDGKSYST 227
LR IA + Y + ++ DL A +L + + ++S FGL +++ +Y++
Sbjct: 141 LR---GIAAGMKYL-ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 196
Query: 228 NLA------YTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLL 281
L +T PE ++ + S ++S+G V+ +++S P DM + +N +
Sbjct: 197 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMTNQDVINAI 253
Query: 282 -MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
D L A + L C Q + RP +V TL ++
Sbjct: 254 EQDYRLPPPMDCPSALHQLML--DCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 116/287 (40%), Gaps = 37/287 (12%)
Query: 79 GEKAANVVYKGRLEN---RQWIAVKKFTKVAWPDPTQ-FKEEAEGVGKL-RRKRLANLIG 133
GE V K R++ R A+K+ + A D + F E E + KL + NL+G
Sbjct: 24 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG 83
Query: 134 YCCAGDERLLVAEYMPNDTL--------------AKHLFHWEKQTIEWPLRLRVAFYIAE 179
C L EY P+ L A + + T+ L A +A
Sbjct: 84 ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR 143
Query: 180 ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL-------MKNSMDGKSYSTNLAYT 232
+DY ++ + ++ DL A +L E+ +++ FGL +K +M + +
Sbjct: 144 GMDYL-SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG----RLPVRWM 198
Query: 233 PPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH-LEGKFS 291
E L S ++S+G +L +++S P M E L + LE +
Sbjct: 199 AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP---YCGMTCAELYEKLPQGYRLEKPLN 255
Query: 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVML 338
++ +V L QC + +P ERPS ++V+L R+ + N L
Sbjct: 256 CDD--EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTL 300
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 116/287 (40%), Gaps = 37/287 (12%)
Query: 79 GEKAANVVYKGRLEN---RQWIAVKKFTKVAWPDPTQ-FKEEAEGVGKL-RRKRLANLIG 133
GE V K R++ R A+K+ + A D + F E E + KL + NL+G
Sbjct: 34 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG 93
Query: 134 YCCAGDERLLVAEYMPNDTL--------------AKHLFHWEKQTIEWPLRLRVAFYIAE 179
C L EY P+ L A + + T+ L A +A
Sbjct: 94 ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR 153
Query: 180 ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL-------MKNSMDGKSYSTNLAYT 232
+DY ++ + ++ DL A +L E+ +++ FGL +K +M + +
Sbjct: 154 GMDYL-SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG----RLPVRWM 208
Query: 233 PPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH-LEGKFS 291
E L S ++S+G +L +++S P M E L + LE +
Sbjct: 209 AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP---YCGMTCAELYEKLPQGYRLEKPLN 265
Query: 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVML 338
++ +V L QC + +P ERPS ++V+L R+ + N L
Sbjct: 266 CDD--EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTL 310
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 17/120 (14%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL-----MKNSMDGKSYSTNLAY 231
I A+ YC+ + ++ DL A +L D D + +++ FG N +D ++ + Y
Sbjct: 122 IVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD--TFCGSPPY 178
Query: 232 TPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF 290
PE + + PE ++S G +L L+SG S D G+NL L + L GK+
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 17/120 (14%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL-----MKNSMDGKSYSTNLAY 231
I A+ YC+ + ++ DL A +L D D + +++ FG N +D ++ + Y
Sbjct: 122 IVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD--TFCGSPPY 178
Query: 232 TPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF 290
PE + + PE ++S G +L L+SG S D G+NL L + L GK+
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 17/120 (14%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL-----MKNSMDGKSYSTNLAY 231
I A+ YC+ + ++ DL A +L D D + +++ FG N +D ++ + Y
Sbjct: 122 IVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD--TFCGSPPY 178
Query: 232 TPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF 290
PE + + PE ++S G +L L+SG S D G+NL L + L GK+
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 29/159 (18%)
Query: 143 LVAEYMPN----DTLAKHLFHWEKQTIEWPLRLRVAF-YIAEALDYCNTEGRPLYHDLNA 197
LV EY D L H + EK+ R F I A+ YC+ + ++ DL A
Sbjct: 83 LVMEYASGGEVFDYLVAHGWMKEKEA-------RAKFRQIVSAVQYCHQK-FIVHRDLKA 134
Query: 198 YRVLFDEDGDPRLSCFGL-----MKNSMDGKSYSTNLAYTPPEYLKNGRV-IPESVIYSF 251
+L D D + +++ FG N +D ++ + Y PE + + PE ++S
Sbjct: 135 ENLLLDADMNIKIADFGFSNEFTFGNKLD--TFCGSPPYAAPELFQGKKYDGPEVDVWSL 192
Query: 252 GTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF 290
G +L L+SG S D G+NL L + L GK+
Sbjct: 193 GVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 223
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLR 172
F EA +G+ + L G G ++V EYM N +L L + Q L +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL-VG 155
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KSYSTN-- 228
+ + + Y + G ++ DL A VL D + ++S FGL + D +Y+T
Sbjct: 156 MLRGVGAGMRYLSDLGY-VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGG 214
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
+ +T PE + S ++SFG V+ ++L+
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLR 172
F EA +G+ + L G G ++V EYM N +L L + Q L +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL-VG 155
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL---MKNSMDGKSYSTN- 228
+ + + Y + G ++ DL A VL D + ++S FGL +++ D +T
Sbjct: 156 MLRGVGAGMRYLSDLGY-VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGG 214
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
+ +T PE + S ++SFG V+ ++L+
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 104/262 (39%), Gaps = 34/262 (12%)
Query: 97 IAVK--KFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER------LLVAEYM 148
+AVK K +A D +F EA + + +A L+G + +++ +M
Sbjct: 54 VAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFM 113
Query: 149 PNDTLAKHLFHWEKQTIEWPLRL------RVAFYIAEALDYCNTEGRPLYHDLNAYRVLF 202
+ L H F + E P L R IA ++Y ++ ++ DL A +
Sbjct: 114 KHGDL--HAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNF-IHRDLAARNCML 170
Query: 203 DEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPP------EYLKNGRVIPESVIYSFGTVLL 256
ED ++ FGL + G Y A P E L + S +++FG +
Sbjct: 171 AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMW 230
Query: 257 DLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPS- 315
++++ P + + E N L+ + K E +V L QC +P++RPS
Sbjct: 231 EIMTRGQTPYA---GIENAEIYNYLIGGN-RLKQPPECMEEVYDLMYQCWSADPKQRPSF 286
Query: 316 ------TKNLVVTLARLQTKSD 331
+N++ L+ L T D
Sbjct: 287 TCLRMELENILGHLSVLSTSQD 308
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 111/266 (41%), Gaps = 33/266 (12%)
Query: 86 VYKGRLENRQW-----IAVKKFTKVAWPDP--TQFKEEAEGVGKLRRKRLANLIGYCCAG 138
VYKG L+ +A+K K + + F EA +G+ + L G
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTL-KAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 118
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFY--IAEALDYCNTEGRPLYHDLN 196
+++ EYM N L K L ++ E+ + V IA + Y ++ DL
Sbjct: 119 KPMMIITEYMENGALDKFL---REKDGEFSVLQLVGMLRGIAAGMKYLANMNY-VHRDLA 174
Query: 197 AYRVLFDEDGDPRLSCFGLMKNSMDG--KSYSTN-----LAYTPPEYLKNGRVIPESVIY 249
A +L + + ++S FGL + D +Y+T+ + +T PE + + S ++
Sbjct: 175 ARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVW 234
Query: 250 SFGTVLLDLLSGKHIP----PSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305
SFG V+ ++++ P +H ++++ N + + ++ + + L QC
Sbjct: 235 SFGIVMWEVMTYGERPYWELSNH--EVMKAINDGFRLPTPMDC------PSAIYQLMMQC 286
Query: 306 LQYEPRERPSTKNLVVTLARLQTKSD 331
Q E RP ++V L +L D
Sbjct: 287 WQQERARRPKFADIVSILDKLIRAPD 312
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 17/120 (14%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL-----MKNSMDGKSYSTNLAY 231
I A+ YC+ + ++ DL A +L D D + +++ FG N +D ++ Y
Sbjct: 122 IVSAVQYCHQK-FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLD--AFCGAPPY 178
Query: 232 TPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF 290
PE + + PE ++S G +L L+SG S D G+NL L + L GK+
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 135 CCAGDERLL-VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRP 190
C + RL V EY+ L +FH ++Q + P FY AE AL+Y + G
Sbjct: 121 CFQTESRLFFVIEYVNGGDL---MFHMQRQR-KLPEE-HARFYSAEISLALNYLHERG-I 174
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPES 246
+Y DL VL D +G +L+ +G+ K + ++ TP PE L+
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 234
Query: 247 VIYSFGTVLLDLLSGK 262
++ G ++ ++++G+
Sbjct: 235 DWWALGVLMFEMMAGR 250
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS---MDGKSYSTNL 229
+ + + L Y ++ G ++ DL V +ED + R+ FGL + + M G Y
Sbjct: 136 LVYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTG--YVATR 192
Query: 230 AYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHI-PPSHALDMIR 274
Y PE + N ++V I+S G ++ +LL GK + P S +D ++
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLK 239
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 25/195 (12%)
Query: 137 AGDERLLVAEYMPNDTLAKHLFHW---EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH 193
GDE +V E++ L + H E+Q V + AL Y + +G ++
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT------VCLSVLRALSYLHNQGV-IHR 165
Query: 194 DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIY 249
D+ + +L DG +LS FG L TP PE + E I+
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIW 225
Query: 250 SFGTVLLDLLSGK----HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305
S G ++++++ G+ + PP A+ IR + D H K SS + G
Sbjct: 226 SLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLH---KVSS----VLRGFLDLM 278
Query: 306 LQYEPRERPSTKNLV 320
L EP +R + + L+
Sbjct: 279 LVREPSQRATAQELL 293
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 14/144 (9%)
Query: 123 LRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFY--IAEA 180
LR + L + DE ++V EY N+ L ++ +K + + R F+ I A
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNE-LFDYIVQRDKMSEQEARR----FFQQIISA 125
Query: 181 LDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYL 237
++YC+ + ++ DL +L DE + +++ FGL DG T+ Y PE +
Sbjct: 126 VEYCHRH-KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 184
Query: 238 KNGRVI--PESVIYSFGTVLLDLL 259
+G++ PE ++S G +L +L
Sbjct: 185 -SGKLYAGPEVDVWSCGVILYVML 207
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS---MDGKSYSTNL 229
+ + + L Y ++ G ++ DL V +ED + R+ FGL + + M G Y
Sbjct: 136 LVYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTG--YVATR 192
Query: 230 AYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHI-PPSHALDMIR 274
Y PE + N ++V I+S G ++ +LL GK + P S +D ++
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLK 239
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 135 CCAGDERLL-VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRP 190
C + RL V EY+ L +FH ++Q + P FY AE AL+Y + G
Sbjct: 89 CFQTESRLFFVIEYVNGGDL---MFHMQRQR-KLPEE-HARFYSAEISLALNYLHERG-I 142
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPES 246
+Y DL VL D +G +L+ +G+ K + ++ TP PE L+
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSV 202
Query: 247 VIYSFGTVLLDLLSGK 262
++ G ++ ++++G+
Sbjct: 203 DWWALGVLMFEMMAGR 218
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 163 QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222
QTI + ++A I +AL++ +++ ++ D+ VL + G ++ FG+ +D
Sbjct: 148 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS 207
Query: 223 KSYSTNLAYTPPEYLKNGRVIPE---------SVIYSFGTVLLDLLSGKH------IPPS 267
+ + + P Y+ R+ PE S I+S G +++L + P
Sbjct: 208 VAKTIDAGCKP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ 265
Query: 268 HALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
++ + L D KFS+E V SQCL+ +ERP+ L+
Sbjct: 266 QLKQVVEEPSPQLPAD-----KFSAE----FVDFTSQCLKKNSKERPTYPELM 309
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 14/144 (9%)
Query: 123 LRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFY--IAEA 180
LR + L + DE ++V EY N+ L ++ +K + + R F+ I A
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNE-LFDYIVQRDKMSEQEARR----FFQQIISA 124
Query: 181 LDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYL 237
++YC+ + ++ DL +L DE + +++ FGL DG T+ Y PE +
Sbjct: 125 VEYCHRH-KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 183
Query: 238 KNGRVI--PESVIYSFGTVLLDLL 259
+G++ PE ++S G +L +L
Sbjct: 184 -SGKLYAGPEVDVWSCGVILYVML 206
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA---YTP 233
I A++YC+ + ++ DL +L D++ + +++ FGL DG T+ Y
Sbjct: 117 IICAIEYCHRH-KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAA 175
Query: 234 PEYLKNGRVI--PESVIYSFGTVLLDLLSGK 262
PE + NG++ PE ++S G VL +L G+
Sbjct: 176 PEVI-NGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 14/144 (9%)
Query: 123 LRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFY--IAEA 180
LR + L + DE ++V EY N+ L ++ +K + + R F+ I A
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNE-LFDYIVQRDKMSEQEARR----FFQQIISA 115
Query: 181 LDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYL 237
++YC+ + ++ DL +L DE + +++ FGL DG T+ Y PE +
Sbjct: 116 VEYCHRH-KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 174
Query: 238 KNGRVI--PESVIYSFGTVLLDLL 259
+G++ PE ++S G +L +L
Sbjct: 175 -SGKLYAGPEVDVWSCGVILYVML 197
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 15/139 (10%)
Query: 138 GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFY---IAEALDYCNTEGRPLYHD 194
D+ V +Y+ L HL Q L R FY IA AL Y ++ +Y D
Sbjct: 111 ADKLYFVLDYINGGELFYHL-----QRERCFLEPRARFYAAEIASALGYLHSLNI-VYRD 164
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYS 250
L +L D G L+ FGL K +++ S ++ TP PE L +
Sbjct: 165 LKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWC 224
Query: 251 FGTVLLDLLSGKHIPPSHA 269
G VL ++L G +PP ++
Sbjct: 225 LGAVLYEMLYG--LPPFYS 241
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 4/115 (3%)
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST--NLAYTPPEYLKNGRVIPESV- 247
+Y DL +L DE G R+S GL + K +++ Y PE L+ G S
Sbjct: 313 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSAD 372
Query: 248 IYSFGTVLLDLLSGKHIPPSHAL-DMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301
+S G +L LL G H D + + L M L FS E + + GL
Sbjct: 373 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 427
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 14/144 (9%)
Query: 123 LRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFY--IAEA 180
LR + L + DE ++V EY N+ L ++ +K + + R F+ I A
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNE-LFDYIVQRDKMSEQEARR----FFQQIISA 119
Query: 181 LDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYL 237
++YC+ + ++ DL +L DE + +++ FGL DG T+ Y PE +
Sbjct: 120 VEYCHRH-KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 178
Query: 238 KNGRVI--PESVIYSFGTVLLDLL 259
+G++ PE ++S G +L +L
Sbjct: 179 -SGKLYAGPEVDVWSCGVILYVML 201
>pdb|1WAO|1 Chain 1, Pp5 Structure
pdb|1WAO|2 Chain 2, Pp5 Structure
pdb|1WAO|3 Chain 3, Pp5 Structure
pdb|1WAO|4 Chain 4, Pp5 Structure
Length = 477
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQA 460
E + Q + F+ KD++ AI +YSQ I +N + Y RSL +L ++ AL DA +A
Sbjct: 8 ELKTQANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATRA 66
Query: 461 QCAHPDWPTAFYMQS---VALSKL 481
+ +Y ++ +AL K
Sbjct: 67 IELDKKYIKGYYRRAASNMALGKF 90
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 16/129 (12%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDLNAYR 199
L+ +Y+ L HL E+ T V Y+ E AL++ + G +Y D+
Sbjct: 136 LILDYINGGELFTHLSQRERFT-----EHEVQIYVGEIVLALEHLHKLG-IIYRDIKLEN 189
Query: 200 VLFDEDGDPRLSCFGLMKNSMDGKS-----YSTNLAYTPPEYLKNGRVIPESVI--YSFG 252
+L D +G L+ FGL K + ++ + + Y P+ ++ G + + +S G
Sbjct: 190 ILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG 249
Query: 253 TVLLDLLSG 261
++ +LL+G
Sbjct: 250 VLMYELLTG 258
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 4/115 (3%)
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST--NLAYTPPEYLKNGRVIPESV- 247
+Y DL +L DE G R+S GL + K +++ Y PE L+ G S
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSAD 373
Query: 248 IYSFGTVLLDLLSGKHIPPSHAL-DMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301
+S G +L LL G H D + + L M L FS E + + GL
Sbjct: 374 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 428
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 4/115 (3%)
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST--NLAYTPPEYLKNGRVIPESV- 247
+Y DL +L DE G R+S GL + K +++ Y PE L+ G S
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSAD 373
Query: 248 IYSFGTVLLDLLSGKHIPPSHAL-DMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301
+S G +L LL G H D + + L M L FS E + + GL
Sbjct: 374 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 428
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 4/115 (3%)
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST--NLAYTPPEYLKNGRVIPESV- 247
+Y DL +L DE G R+S GL + K +++ Y PE L+ G S
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSAD 373
Query: 248 IYSFGTVLLDLLSGKHIPPSHAL-DMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301
+S G +L LL G H D + + L M L FS E + + GL
Sbjct: 374 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 428
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 116/287 (40%), Gaps = 37/287 (12%)
Query: 79 GEKAANVVYKGRLEN---RQWIAVKKFTKVAWPDPTQ-FKEEAEGVGKL-RRKRLANLIG 133
GE V K R++ R A+K+ + A D + F E E + KL + NL+G
Sbjct: 31 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG 90
Query: 134 YCCAGDERLLVAEYMPNDTL--------------AKHLFHWEKQTIEWPLRLRVAFYIAE 179
C L EY P+ L A + + T+ L A +A
Sbjct: 91 ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR 150
Query: 180 ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL-------MKNSMDGKSYSTNLAYT 232
+DY ++ + ++ +L A +L E+ +++ FGL +K +M + +
Sbjct: 151 GMDYL-SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG----RLPVRWM 205
Query: 233 PPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH-LEGKFS 291
E L S ++S+G +L +++S P M E L + LE +
Sbjct: 206 AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP---YCGMTCAELYEKLPQGYRLEKPLN 262
Query: 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVML 338
++ +V L QC + +P ERPS ++V+L R+ + N L
Sbjct: 263 CDD--EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTL 307
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 81 KAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140
KA+ VY +L + KF + D F EE + + + L +C D+
Sbjct: 97 KASQKVYAMKL-------LSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL--FCAFQDD 147
Query: 141 RLL--VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
+ L V EYMP L + +++ +W FY AE ALD ++ G ++ D+
Sbjct: 148 KYLYMVMEYMPGGDLVNLMSNYDVPE-KW-----AKFYTAEVVLALDAIHSMGL-IHRDV 200
Query: 196 NAYRVLFDEDGDPRLSCFG-LMKNSMDGKSYSTNLAYTP----PEYLK----NGRVIPES 246
+L D+ G +L+ FG MK G + TP PE LK +G E
Sbjct: 201 KPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGREC 260
Query: 247 VIYSFGTVLLDLLSG 261
+S G L ++L G
Sbjct: 261 DWWSVGVFLFEMLVG 275
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 108/251 (43%), Gaps = 20/251 (7%)
Query: 79 GEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYC-- 135
G+ A+ VY + Q +A+++ P E + +R + N++ Y
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE---ILVMRENKNPNIVNYLDS 86
Query: 136 -CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHD 194
GDE +V EY+ +L + + ++ V +AL++ ++ + ++ D
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHS-NQVIHRD 142
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYS 250
+ + +L DG +L+ FG +S + + TP PE + P+ I+S
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWS 202
Query: 251 FGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV-GLASQCLQYE 309
G + ++++ G+ PP + +R L L+ + + E+ + + ++CL+ +
Sbjct: 203 LGIMAIEMIEGE--PPYLNENPLRA--LYLIATNGTPELQNPEKLSAIFRDFLNRCLEMD 258
Query: 310 PRERPSTKNLV 320
+R S K L+
Sbjct: 259 VEKRGSAKELI 269
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 135 CCAGDERLL-VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRP 190
C + RL V EY+ L +FH ++Q + P FY AE AL+Y + G
Sbjct: 74 CFQTESRLFFVIEYVNGGDL---MFHMQRQR-KLPEE-HARFYSAEISLALNYLHERGI- 127
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPES 246
+Y DL VL D +G +L+ +G+ K + ++ TP PE L+
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSV 187
Query: 247 VIYSFGTVLLDLLSGK 262
++ G ++ ++++G+
Sbjct: 188 DWWALGVLMFEMMAGR 203
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS---MDGKSYSTNL 229
+ + + L Y ++ G ++ DL V +ED + R+ FGL + + M G Y
Sbjct: 128 LVYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTG--YVATR 184
Query: 230 AYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHI-PPSHALDMIR 274
Y PE + N ++V I+S G ++ +LL GK + P S +D ++
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLK 231
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAY 198
D V EY+ L H+ + + P + A IA L + ++G +Y DL
Sbjct: 415 DRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQSKGI-IYRDLKLD 471
Query: 199 RVLFDEDGDPRLSCFGLMK-NSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTV 254
V+ D +G +++ FG+ K N DG K + Y PE + ++FG +
Sbjct: 472 NVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 531
Query: 255 LLDLLSGK 262
L ++L+G+
Sbjct: 532 LYEMLAGQ 539
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 86 VYKGRLE---NRQWIAVKKFTKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAGDE 140
V GRL+ R+ K KV + + + F EA +G+ + +L G
Sbjct: 38 VCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKP 97
Query: 141 RLLVAEYMPNDTLAKHLFHWEKQ--TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAY 198
++V EYM N +L L + Q I+ LR I+ + Y + G ++ DL A
Sbjct: 98 VMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR---GISAGMKYLSDMGY-VHRDLAAR 153
Query: 199 RVLFDEDGDPRLSCFGLMKNSMDG--KSYSTN-----LAYTPPEYLKNGRVIPESVIYSF 251
+L + + ++S FGL + D +Y+T + +T PE + + S ++S+
Sbjct: 154 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSY 213
Query: 252 GTVLLDLLS 260
G V+ +++S
Sbjct: 214 GIVMWEVVS 222
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 84/196 (42%), Gaps = 17/196 (8%)
Query: 79 GEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYC-- 135
G+ A+ VY + Q +A+++ P E + +R + N++ Y
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE---ILVMRENKNPNIVNYLDS 85
Query: 136 -CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHD 194
GDE +V EY+ +L + + ++ V +AL++ ++ + ++ D
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHS-NQVIHRD 141
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYS 250
+ + +L DG +L+ FG +S + + TP PE + P+ I+S
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWS 201
Query: 251 FGTVLLDLLSGKHIPP 266
G + ++++ G+ PP
Sbjct: 202 LGIMAIEMIEGE--PP 215
>pdb|1A17|A Chain A, Tetratricopeptide Repeats Of Protein Phosphatase 5
Length = 166
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQA 460
E + Q + F+ KD++ AI +YSQ I +N + Y RSL +L ++ AL DA +A
Sbjct: 15 ELKTQANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATRA 73
Query: 461 QCAHPDWPTAFYMQS---VALSKL 481
+ +Y ++ +AL K
Sbjct: 74 IELDKKYIKGYYRRAASNMALGKF 97
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 19/224 (8%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQ--TIEWPLR 170
F EA +G+ + +L G G ++V E+M N L L + Q I+
Sbjct: 91 FLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGM 150
Query: 171 LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS--YSTN 228
LR IA + Y G ++ DL A +L + + ++S FGL + D Y+T
Sbjct: 151 LR---GIAAGMRYLADMGY-VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTT 206
Query: 229 -----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD 283
+ +T PE ++ + S ++S+G V+ +++S P DM + + + +
Sbjct: 207 GGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMSNQDVIKAIEE 263
Query: 284 SH-LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ L + L C Q E ERP + +V L ++
Sbjct: 264 GYRLPAPMDCPAGLHQLML--DCWQKERAERPKFEQIVGILDKM 305
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 135 CCAGDERLL-VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRP 190
C + RL V EY+ L +FH ++Q + P FY AE AL+Y + G
Sbjct: 78 CFQTESRLFFVIEYVNGGDL---MFHMQRQR-KLPEE-HARFYSAEISLALNYLHERGI- 131
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPES 246
+Y DL VL D +G +L+ +G+ K + ++ TP PE L+
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSV 191
Query: 247 VIYSFGTVLLDLLSGK 262
++ G ++ ++++G+
Sbjct: 192 DWWALGVLMFEMMAGR 207
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 84/196 (42%), Gaps = 17/196 (8%)
Query: 79 GEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYC-- 135
G+ A+ VY + Q +A+++ P E + +R + N++ Y
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE---ILVMRENKNPNIVNYLDS 85
Query: 136 -CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHD 194
GDE +V EY+ +L + + ++ V +AL++ ++ + ++ D
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHS-NQVIHRD 141
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYS 250
+ + +L DG +L+ FG +S + + TP PE + P+ I+S
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWS 201
Query: 251 FGTVLLDLLSGKHIPP 266
G + ++++ G+ PP
Sbjct: 202 LGIMAIEMIEGE--PP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 84/196 (42%), Gaps = 17/196 (8%)
Query: 79 GEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYC-- 135
G+ A+ VY + Q +A+++ P E + +R + N++ Y
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE---ILVMRENKNPNIVNYLDS 85
Query: 136 -CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHD 194
GDE +V EY+ +L + + ++ V +AL++ ++ + ++ D
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHS-NQVIHRD 141
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYS 250
+ + +L DG +L+ FG +S + + TP PE + P+ I+S
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWS 201
Query: 251 FGTVLLDLLSGKHIPP 266
G + ++++ G+ PP
Sbjct: 202 LGIMAIEMIEGE--PP 215
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 88/214 (41%), Gaps = 18/214 (8%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIE----WPLRLRVAFY--- 176
+ + + NL+G C G L++ EY L L + ++ PL LR +
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 177 -IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------L 229
+A+ + + ++ ++ D+ A VL ++ FGL ++ M+ +Y +
Sbjct: 160 QVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK 289
+ PE + + +S ++S+G +L ++ S P L + + L+ D + +
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL--VNSKFYKLVKDGYQMAQ 276
Query: 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ + + C EP RP+ + + L
Sbjct: 277 -PAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 309
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 88/214 (41%), Gaps = 18/214 (8%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIE----WPLRLRVAFY--- 176
+ + + NL+G C G L++ EY L L + ++ PL LR +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 177 -IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------L 229
+A+ + + ++ ++ D+ A VL ++ FGL ++ M+ +Y +
Sbjct: 168 QVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK 289
+ PE + + +S ++S+G +L ++ S P L + + L+ D + +
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL--VNSKFYKLVKDGYQMAQ 284
Query: 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ + + C EP RP+ + + L
Sbjct: 285 -PAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 317
>pdb|2BUG|A Chain A, Solution Structure Of The Tpr Domain From Protein
Phosphatase 5 In Complex With Hsp90 Derived Peptide
Length = 140
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQA 460
E + Q + F+ KD++ AI +YSQ I +N + Y RSL +L ++ AL DA +A
Sbjct: 23 ELKTQANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALNDATRA 81
Query: 461 QCAHPDWPTAFYMQS---VALSKL 481
+ +Y ++ +AL K
Sbjct: 82 IELDKKYIKGYYRRAASNMALGKF 105
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 71/164 (43%), Gaps = 19/164 (11%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFD-EDGDPRLSCFG--LMKNSMDGKSYSTNLAYTP 233
+ A+ +C++ G ++ D+ +L D G +L FG + + + Y+P
Sbjct: 148 VVAAIQHCHSRGV-VHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSP 206
Query: 234 PEYLKNGR--VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291
PE++ + +P +V +S G +L D++ G I E ++++ L F
Sbjct: 207 PEWISRHQYHALPATV-WSLGILLYDMVCGD----------IPFERDQEILEAELH--FP 253
Query: 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+ + L +CL +P RPS + +++ DVP N
Sbjct: 254 AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLN 297
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 48/285 (16%)
Query: 75 VSESGEKAANVVYKGRLENR---QWIAVKKFTKVAWPDPTQFK---EEAEGVGKLRRKRL 128
+ + GE + VV+K R NR Q +A+KKF + + DP K E + +L+ L
Sbjct: 8 IGKIGEGSYGVVFKCR--NRDTGQIVAIKKFLE-SEDDPVIKKIALREIRMLKQLKHPNL 64
Query: 129 ANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG 188
NL+ LV EY + T+ L +++ E ++ + + +A+++C+
Sbjct: 65 VNLLEVFRRKRRLHLVFEYC-DHTVLHELDRYQRGVPEHLVK-SITWQTLQAVNFCHKHN 122
Query: 189 RPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS--YSTNLA---YTPPEYL-KNGRV 242
++ D+ +L + +L FG + + G S Y +A Y PE L + +
Sbjct: 123 -CIHRDVKPENILITKHSVIKLCDFGFAR-LLTGPSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 243 IPESVIYSFGTVLLDLLSGKHIPPSHA----LDMIRGENLNLLMDSH------------- 285
P +++ G V +LLSG + P + L +IR + L L+ H
Sbjct: 181 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIR-KTLGDLIPRHQQVFSTNQYFSGV 239
Query: 286 ----------LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
LE KF + + +GL CL +P ER + + L+
Sbjct: 240 KIPDPEDMEPLELKFPNI-SYPALGLLKGCLHMDPTERLTCEQLL 283
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAY 198
D V EY+ L H+ + + P + A IA L + ++G +Y DL
Sbjct: 94 DRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQSKGI-IYRDLKLD 150
Query: 199 RVLFDEDGDPRLSCFGLMK-NSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTV 254
V+ D +G +++ FG+ K N DG K + Y PE + ++FG +
Sbjct: 151 NVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 210
Query: 255 LLDLLSGK 262
L ++L+G+
Sbjct: 211 LYEMLAGQ 218
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 16/163 (9%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F+ E +L + + ++I D LV EY+ TL++++ PL +
Sbjct: 57 RFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH------GPLSV 110
Query: 172 RVAF-YIAEALDYCNT--EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN 228
A + + LD + R ++ D+ +L D + ++ FG+ K + TN
Sbjct: 111 DTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTN 170
Query: 229 -----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPP 266
+ Y PE K + IYS G VL ++L G+ PP
Sbjct: 171 HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE--PP 211
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 21/191 (10%)
Query: 91 LENRQWIAVKKFTKVAWPDPT---QFKEEAEGVGKLRRKRLANLI----GYCCAGDERLL 143
L + + +AVK DP+ +F+ EA+ L + + AG +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 144 VAEYMPNDTLAKHLFHWEKQTIEWPLR-LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF 202
V EY+ TL + + H E P R + V +AL++ + G ++ D+ ++
Sbjct: 94 VMEYVDGVTL-RDIVHTEGPM--TPKRAIEVIADACQALNFSHQNGI-IHRDVKPANIMI 149
Query: 203 DEDGDPRLSCFGLMKNSMDGKSYSTNLA-------YTPPEYLKNGRVIPESVIYSFGTVL 255
++ FG+ + D + T A Y PE + V S +YS G VL
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 256 LDLLSGKHIPP 266
++L+G+ PP
Sbjct: 210 YEVLTGE--PP 218
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 22/186 (11%)
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED 205
E+ TL + + + ++ L L + I + +DY +++ + ++ DL + +
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLIHRDLKPSNIFLVDT 172
Query: 206 GDPRLSCFGL---MKNSMDGKSYSTN--LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
++ FGL +KN DGK + L Y PE + + E +Y+ G +L +LL
Sbjct: 173 KQVKIGDFGLVTSLKN--DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL- 229
Query: 261 GKHIPPSHALDMI--RGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKN 318
H D + L D + F +E T L + L +P +RP+T
Sbjct: 230 -------HVCDTAFETSKFFTDLRDGIISDIFDKKEKT----LLQKLLSKKPEDRPNTSE 278
Query: 319 LVVTLA 324
++ TL
Sbjct: 279 ILRTLT 284
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 69/163 (42%), Gaps = 12/163 (7%)
Query: 171 LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-- 228
+ +F +A +++ ++ + ++ DL A +L E+ ++ FGL ++ Y
Sbjct: 202 ISYSFQVARGMEFLSSR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGD 260
Query: 229 ----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMD 283
L + PE + + +S ++S+G +L ++ S P P +D E+ +
Sbjct: 261 TRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMD----EDFCSRLR 316
Query: 284 SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ + ++ + C +P+ERP LV L L
Sbjct: 317 EGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 21/226 (9%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQ--TIEWPLR 170
F EA +G+ + +L G +++ E+M N +L L + Q I+
Sbjct: 55 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 114
Query: 171 LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL---MKNSMDGKSYST 227
LR IA + Y + ++ L A +L + + ++S FGL +++ +Y++
Sbjct: 115 LR---GIAAGMKYL-ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 170
Query: 228 NLA------YTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLL 281
L +T PE ++ + S ++S+G V+ +++S P DM + +N +
Sbjct: 171 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMTNQDVINAI 227
Query: 282 -MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
D L A + L C Q + RP +V TL ++
Sbjct: 228 EQDYRLPPPMDCPSALHQLML--DCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 26/173 (15%)
Query: 163 QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222
QTI + ++A I +AL++ +++ ++ D+ VL + G ++ FG+ +D
Sbjct: 104 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163
Query: 223 KSYSTNLAYTPPEYLKNGRVIPE---------SVIYSFGTVLLDLLSGKH------IPPS 267
+ + P Y+ R+ PE S I+S G +++L + P
Sbjct: 164 VAKDIDAGCKP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ 221
Query: 268 HALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
++ + L D KFS+E V SQCL+ +ERP+ L+
Sbjct: 222 QLKQVVEEPSPQLPAD-----KFSAE----FVDFTSQCLKKNSKERPTYPELM 265
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 21/191 (10%)
Query: 91 LENRQWIAVKKFTKVAWPDPT---QFKEEAEGVGKLRRKRLANLI----GYCCAGDERLL 143
L + + +AVK DP+ +F+ EA+ L + + AG +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 144 VAEYMPNDTLAKHLFHWEKQTIEWPLR-LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF 202
V EY+ TL + + H E P R + V +AL++ + G ++ D+ ++
Sbjct: 94 VMEYVDGVTL-RDIVHTEGPM--TPKRAIEVIADACQALNFSHQNGI-IHRDVKPANIMI 149
Query: 203 DEDGDPRLSCFGLMKNSMDGKSYSTNLA-------YTPPEYLKNGRVIPESVIYSFGTVL 255
++ FG+ + D + T A Y PE + V S +YS G VL
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 256 LDLLSGKHIPP 266
++L+G+ PP
Sbjct: 210 YEVLTGE--PP 218
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 171 LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-- 228
+ A+ I++ + Y E + ++ DL A +L E ++S FGL ++ + SY
Sbjct: 153 ISFAWQISQGMQYL-AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQ 211
Query: 229 ----LAYTPPEYLKNGRVIPESVIYSFGTVLLDL--LSGK---HIPPSHALDMIRGENLN 279
+ + E L + +S ++SFG +L ++ L G IPP ++++ +
Sbjct: 212 GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM 271
Query: 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329
D+ SEE + L QC + EP +RP ++ L ++ K
Sbjct: 272 ERPDN------CSEEMYR---LMLQCWKQEPDKRPVFADISKDLEKMMVK 312
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF 202
LV EY+P+ L + + ++ L + I + ++Y + R ++ DL A +L
Sbjct: 90 LVMEYLPSGCL-RDFLQRHRARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILV 147
Query: 203 DEDGDPRLSCFGLMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVL 255
+ + +++ FGL K K Y + + + PE L + +S ++SFG VL
Sbjct: 148 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 207
Query: 256 LDLLS 260
+L +
Sbjct: 208 YELFT 212
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 57 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 116
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + Y ++ + ++
Sbjct: 117 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVH 174
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + YS + + + E L+ +
Sbjct: 175 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 234
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 235 KSDVWSFGVLLWELMT-RGAPP 255
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 39 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 98
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + Y ++ + ++
Sbjct: 99 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVH 156
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + YS + + + E L+ +
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 217 KSDVWSFGVLLWELMT-RGAPP 237
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF 202
LV EY+P+ L + + ++ L + I + ++Y + R ++ DL A +L
Sbjct: 103 LVMEYLPSGCL-RDFLQRHRARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILV 160
Query: 203 DEDGDPRLSCFGLMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVL 255
+ + +++ FGL K K Y + + + PE L + +S ++SFG VL
Sbjct: 161 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 220
Query: 256 LDLLS 260
+L +
Sbjct: 221 YELFT 225
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 21/191 (10%)
Query: 91 LENRQWIAVKKFTKVAWPDPT---QFKEEAEGVGKLRRKRLANLI----GYCCAGDERLL 143
L + + +AVK DP+ +F+ EA+ L + + AG +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 144 VAEYMPNDTLAKHLFHWEKQTIEWPLR-LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF 202
V EY+ TL + + H E P R + V +AL++ + G ++ D+ +L
Sbjct: 94 VMEYVDGVTL-RDIVHTEGPM--TPKRAIEVIADACQALNFSHQNGI-IHRDVKPANILI 149
Query: 203 DEDGDPRLSCFGLMKNSMD-GKSYSTNLA------YTPPEYLKNGRVIPESVIYSFGTVL 255
++ FG+ + D G S A Y PE + V S +YS G VL
Sbjct: 150 SATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 256 LDLLSGKHIPP 266
++L+G+ PP
Sbjct: 210 YEVLTGE--PP 218
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 39 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 98
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + Y ++ + ++
Sbjct: 99 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVH 156
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + YS + + + E L+ +
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 217 KSDVWSFGVLLWELMT-RGAPP 237
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF 202
LV EY+P+ L + + ++ L + I + ++Y + R ++ DL A +L
Sbjct: 91 LVMEYLPSGCL-RDFLQRHRARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILV 148
Query: 203 DEDGDPRLSCFGLMKNSMDGKSY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVL 255
+ + +++ FGL K K Y + + + PE L + +S ++SFG VL
Sbjct: 149 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 208
Query: 256 LDLLS 260
+L +
Sbjct: 209 YELFT 213
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 58 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 117
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + Y ++ + ++
Sbjct: 118 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVH 175
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + YS + + + E L+ +
Sbjct: 176 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 235
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 236 KSDVWSFGVLLWELMT-RGAPP 256
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 37 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 96
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + Y ++ + ++
Sbjct: 97 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVH 154
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + YS + + + E L+ +
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 214
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 215 KSDVWSFGVLLWELMT-RGAPP 235
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 36 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 95
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + Y ++ + ++
Sbjct: 96 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVH 153
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + YS + + + E L+ +
Sbjct: 154 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 213
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 214 KSDVWSFGVLLWELMT-RGAPP 234
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 38 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 97
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + Y ++ + ++
Sbjct: 98 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVH 155
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + YS + + + E L+ +
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 215
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 216 KSDVWSFGVLLWELMT-RGAPP 236
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 21/209 (10%)
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
Q + E E L + L Y L+ EY P L K L + T +
Sbjct: 69 QLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTA 126
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG--LMKNSMDGKSYSTNL 229
+ +A+AL YC+ + + ++ D+ +L G+ +++ FG + S+ K+ L
Sbjct: 127 TIMEELADALMYCHGK-KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTL 185
Query: 230 AYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPP----SHALDMIRGENLNLLMDS 284
Y PPE ++ GR+ E V ++ G + +LL G PP SH R ++L
Sbjct: 186 DYLPPEMIE-GRMHNEKVDLWCIGVLCYELLVGN--PPFESASHNETYRRIVKVDL---- 238
Query: 285 HLEGKFSSEEATQVVGLASQCLQYEPRER 313
KF + T L S+ L++ P ER
Sbjct: 239 ----KFPASVPTGAQDLISKLLRHNPSER 263
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 7/158 (4%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLR 172
F EA + L+ +L L + ++ E+M +L L E P +
Sbjct: 57 FLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 115
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN---- 228
+ IAE + + ++ DL A +L +++ FGL + D + +
Sbjct: 116 FSAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 174
Query: 229 -LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP 265
+ +T PE + G +S ++SFG +L+++++ IP
Sbjct: 175 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 34 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 93
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + Y ++ + ++
Sbjct: 94 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVH 151
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + YS + + + E L+ +
Sbjct: 152 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 211
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 212 KSDVWSFGVLLWELMT-RGAPP 232
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 66/153 (43%), Gaps = 7/153 (4%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLR 172
F EA + L+ +L L + ++ E+M +L L E P +
Sbjct: 224 FLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 282
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYT 232
+ IAE + + ++ DL A +L +++ FGL + G + + +T
Sbjct: 283 FSAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARV---GAKFP--IKWT 336
Query: 233 PPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP 265
PE + G +S ++SFG +L+++++ IP
Sbjct: 337 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 108/251 (43%), Gaps = 20/251 (7%)
Query: 79 GEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYC-- 135
G+ A+ VY + Q +A+++ P E + +R + N++ Y
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE---ILVMRENKNPNIVNYLDS 86
Query: 136 -CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHD 194
GDE +V EY+ +L + + ++ V +AL++ ++ + ++ +
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHS-NQVIHRN 142
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYS 250
+ + +L DG +L+ FG +S + + TP PE + P+ I+S
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWS 202
Query: 251 FGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV-GLASQCLQYE 309
G + ++++ G+ PP + +R L L+ + + E+ + + ++CL+ +
Sbjct: 203 LGIMAIEMIEGE--PPYLNENPLRA--LYLIATNGTPELQNPEKLSAIFRDFLNRCLEMD 258
Query: 310 PRERPSTKNLV 320
+R S K L+
Sbjct: 259 VEKRGSAKELI 269
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 120 VGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE 179
+G L + L+G C G LV +Y+P +L H+ + + L L IA+
Sbjct: 87 IGSLDHAHIVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAK 144
Query: 180 ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK-NSMDGKSYSTNLAYTPPEY-- 236
+ Y G ++ +L A VL +++ FG+ D K + A TP ++
Sbjct: 145 GMYYLEEHGM-VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 237 ---LKNGRVIPESVIYSFGTVLLDLLS 260
+ G+ +S ++S+G + +L++
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 31 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 90
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + Y ++ + ++
Sbjct: 91 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVH 148
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + YS + + + E L+ +
Sbjct: 149 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 208
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 209 KSDVWSFGVLLWELMT-RGAPP 229
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF 202
++ E+M +L L E P + + IAE + + ++ DL A +L
Sbjct: 259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY-IHRDLRAANILV 317
Query: 203 DEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLD 257
+++ FGL + D + + + +T PE + G +S ++SFG +L++
Sbjct: 318 SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLME 377
Query: 258 LLSGKHIP 265
+++ IP
Sbjct: 378 IVTYGRIP 385
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 26/172 (15%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY+ L H+ Q + + FY AE L + + G +Y DL
Sbjct: 93 DRLYFVMEYVNGGDLMYHI-----QQVGKFKEPQAVFYAAEISIGLFFLHKRGI-IYRDL 146
Query: 196 NAYRVLFDEDGDPRLSCFGLMK-NSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSF 251
V+ D +G +++ FG+ K + MDG + + Y PE + +++
Sbjct: 147 KLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAY 206
Query: 252 GTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS-----SEEATQV 298
G +L ++L+G+ PP GE+ + L S +E S S+EA +
Sbjct: 207 GVLLYEMLAGQ--PP------FDGEDEDELFQSIMEHNVSYPKSLSKEAVSI 250
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 22/186 (11%)
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED 205
E+ TL + + + ++ L L + I + +DY +++ + + DL + +
Sbjct: 100 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFLVDT 158
Query: 206 GDPRLSCFGL---MKNSMDGKSYSTN--LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
++ FGL +KN DGK + L Y PE + + E +Y+ G +L +LL
Sbjct: 159 KQVKIGDFGLVTSLKN--DGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL- 215
Query: 261 GKHIPPSHALDMI--RGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKN 318
H D + L D + F +E T L + L +P +RP+T
Sbjct: 216 -------HVCDTAFETSKFFTDLRDGIISDIFDKKEKT----LLQKLLSKKPEDRPNTSE 264
Query: 319 LVVTLA 324
++ TL
Sbjct: 265 ILRTLT 270
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 21/185 (11%)
Query: 97 IAVKKFTKVAWPDPT---QFKEEAEGVGKLRRKRLANLIGY----CCAGDERLLVAEYMP 149
+AVK DP+ +F+ EA+ L + + AG +V EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVD 99
Query: 150 NDTLAKHLFHWEKQTIEWPLR-LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDP 208
TL + + H E P R + V +AL++ + G ++ D+ ++
Sbjct: 100 GVTL-RDIVHTEGPM--TPKRAIEVIADACQALNFSHQNGI-IHRDVKPANIMISATNAV 155
Query: 209 RLSCFGLMKNSMDGKSYSTNLA-------YTPPEYLKNGRVIPESVIYSFGTVLLDLLSG 261
++ FG+ + D + T A Y PE + V S +YS G VL ++L+G
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 262 KHIPP 266
+ PP
Sbjct: 216 E--PP 218
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 120 VGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE 179
+G L + L+G C G LV +Y+P +L H+ + + L L IA+
Sbjct: 69 IGSLDHAHIVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAK 126
Query: 180 ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK-NSMDGKSYSTNLAYTPPEY-- 236
+ Y G ++ +L A VL +++ FG+ D K + A TP ++
Sbjct: 127 GMYYLEEHGM-VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 237 ---LKNGRVIPESVIYSFGTVLLDLLS 260
+ G+ +S ++S+G + +L++
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 84/214 (39%), Gaps = 22/214 (10%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHL------------FHWEKQTIEWPLRL 171
+ + + NL+G C G L++ EY L L F T+ L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+ +A+ + + ++ ++ D+ A VL ++ FGL ++ M+ +Y
Sbjct: 168 HFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ + PE + + +S ++S+G +L ++ S P L + + L+ D +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL--VNSKFYKLVKDGY 284
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319
+ + + + C EP RP+ + +
Sbjct: 285 QMAQ-PAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 23/200 (11%)
Query: 75 VSESGEKAANVVYKGRLE---NRQWIAVKKFTKVAWPDPTQ--FKEEAEGVGKLRRKRLA 129
V E GE V GRL+ R+ K K + D + F EA +G+ +
Sbjct: 39 VGEFGE-----VCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQ--TIEWPLRLRVAFYIAEALDYCNTE 187
+L G +++ EYM N +L L + + I+ LR I + Y ++
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYL-SD 149
Query: 188 GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KSYSTN-----LAYTPPEYLKNG 240
++ DL A +L + + ++S FG+ + D +Y+T + +T PE +
Sbjct: 150 MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 209
Query: 241 RVIPESVIYSFGTVLLDLLS 260
+ S ++S+G V+ +++S
Sbjct: 210 KFTSASDVWSYGIVMWEVMS 229
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 21/185 (11%)
Query: 97 IAVKKFTKVAWPDPT---QFKEEAEGVGKLRRKRLANLI----GYCCAGDERLLVAEYMP 149
+AVK DP+ +F+ EA+ L + + AG +V EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 150 NDTLAKHLFHWEKQTIEWPLR-LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDP 208
TL + + H E P R + V +AL++ + G ++ D+ ++
Sbjct: 100 GVTL-RDIVHTEGPM--TPKRAIEVIADACQALNFSHQNGI-IHRDVKPANIMISATNAV 155
Query: 209 RLSCFGLMKNSMDGKSYSTNLA-------YTPPEYLKNGRVIPESVIYSFGTVLLDLLSG 261
++ FG+ + D + T A Y PE + V S +YS G VL ++L+G
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 262 KHIPP 266
+ PP
Sbjct: 216 E--PP 218
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 16/161 (9%)
Query: 174 AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP 233
A+ ++ AL Y ++ R ++ D+ A VL + +L FGL + D Y + P
Sbjct: 119 AYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 177
Query: 234 -----PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG 288
PE + R S ++ FG + ++L H + +G N ++ G
Sbjct: 178 IKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGVKPFQGVKNNDVIGRIENG 230
Query: 289 K---FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ + L ++C Y+P RP L L+ +
Sbjct: 231 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 21/185 (11%)
Query: 97 IAVKKFTKVAWPDPT---QFKEEAEGVGKLRRKRLANLI----GYCCAGDERLLVAEYMP 149
+AVK DP+ +F+ EA+ L + + AG +V EY+
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 116
Query: 150 NDTLAKHLFHWEKQTIEWPLR-LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDP 208
TL + + H E P R + V +AL++ + G ++ D+ ++
Sbjct: 117 GVTL-RDIVHTEGPM--TPKRAIEVIADACQALNFSHQNGI-IHRDVKPANIMISATNAV 172
Query: 209 RLSCFGLMKNSMDGKSYSTNLA-------YTPPEYLKNGRVIPESVIYSFGTVLLDLLSG 261
++ FG+ + D + T A Y PE + V S +YS G VL ++L+G
Sbjct: 173 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
Query: 262 KHIPP 266
+ PP
Sbjct: 233 E--PP 235
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 16/161 (9%)
Query: 174 AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN----- 228
A+ ++ AL Y ++ R ++ D+ A VL + +L FGL + D Y +
Sbjct: 114 AYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 172
Query: 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG 288
+ + PE + R S ++ FG + ++L H + +G N ++ G
Sbjct: 173 IKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGVKPFQGVKNNDVIGRIENG 225
Query: 289 K---FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ + L ++C Y+P RP L L+ +
Sbjct: 226 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 16/161 (9%)
Query: 174 AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP 233
A+ ++ AL Y ++ R ++ D+ A VL + +L FGL + D Y + P
Sbjct: 120 AYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 178
Query: 234 -----PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG 288
PE + R S ++ FG + ++L H + +G N ++ G
Sbjct: 179 IKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGVKPFQGVKNNDVIGRIENG 231
Query: 289 K---FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ + L ++C Y+P RP L L+ +
Sbjct: 232 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 16/161 (9%)
Query: 174 AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN----- 228
A+ ++ AL Y ++ R ++ D+ A VL + +L FGL + D Y +
Sbjct: 117 AYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG 288
+ + PE + R S ++ FG + ++L H + +G N ++ G
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGVKPFQGVKNNDVIGRIENG 228
Query: 289 K---FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ + L ++C Y+P RP L L+ +
Sbjct: 229 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 16/161 (9%)
Query: 174 AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN----- 228
A+ ++ AL Y ++ R ++ D+ A VL + +L FGL + D Y +
Sbjct: 122 AYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 180
Query: 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG 288
+ + PE + R S ++ FG + ++L H + +G N ++ G
Sbjct: 181 IKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGVKPFQGVKNNDVIGRIENG 233
Query: 289 K---FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ + L ++C Y+P RP L L+ +
Sbjct: 234 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 16/161 (9%)
Query: 174 AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN----- 228
A+ ++ AL Y ++ R ++ D+ A VL + +L FGL + D Y +
Sbjct: 145 AYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 203
Query: 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG 288
+ + PE + R S ++ FG + ++L H + +G N ++ G
Sbjct: 204 IKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGVKPFQGVKNNDVIGRIENG 256
Query: 289 K---FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ + L ++C Y+P RP L L+ +
Sbjct: 257 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS-YSTNLAY 231
+ + I L Y ++ ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 137 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWY 195
Query: 232 TPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPS 267
PE + N ++V I+S G ++ +LL+G+ + P
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 16/161 (9%)
Query: 174 AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN----- 228
A+ ++ AL Y ++ R ++ D+ A VL + +L FGL + D Y +
Sbjct: 117 AYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG 288
+ + PE + R S ++ FG + ++L H + +G N ++ G
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGVKPFQGVKNNDVIGRIENG 228
Query: 289 K---FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ + L ++C Y+P RP L L+ +
Sbjct: 229 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS-YSTNLAY 231
+ + I L Y ++ ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 137 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWY 195
Query: 232 TPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPS 267
PE + N ++V I+S G ++ +LL+G+ + P
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS-YSTNLAY 231
+ + I L Y ++ ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 137 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWY 195
Query: 232 TPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPS 267
PE + N ++V I+S G ++ +LL+G+ + P
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS-YSTNLAY 231
+ + I L Y ++ ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 136 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWY 194
Query: 232 TPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPS 267
PE + N ++V I+S G ++ +LL+G+ + P
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 16/161 (9%)
Query: 174 AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP 233
A+ ++ AL Y ++ R ++ D+ A VL + +L FGL + D Y + P
Sbjct: 497 AYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 555
Query: 234 -----PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG 288
PE + R S ++ FG + ++L H + +G N ++ G
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGVKPFQGVKNNDVIGRIENG 608
Query: 289 K---FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ + L ++C Y+P RP L L+ +
Sbjct: 609 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 87/221 (39%), Gaps = 38/221 (17%)
Query: 128 LANLIGYCCAGDERLLVAEYMPNDTLAKHL------FHWEKQT----------IEWPLRL 171
+ NL+G C G L++ EY L L F K + ++ L
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
++ +A+ + + ++ ++ DL A +L ++ FGL ++ + +Y
Sbjct: 165 SFSYQVAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALD-----MIRGENLN 279
+ + PE + N ES ++S+G L +L S P P +D MI+ E
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK-EGFR 282
Query: 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+L H ++ + C +P +RP+ K +V
Sbjct: 283 MLSPEH--------APAEMYDIMKTCWDADPLKRPTFKQIV 315
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 83/214 (38%), Gaps = 22/214 (10%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHL------------FHWEKQTIEWPLRL 171
+ + + NL+G C G L++ EY L L F T L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
+ +A+ + + ++ ++ D+ A VL ++ FGL ++ M+ +Y
Sbjct: 168 HFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
+ + PE + + +S ++S+G +L ++ S P L + + L+ D +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL--VNSKFYKLVKDGY 284
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319
+ + + + C EP RP+ + +
Sbjct: 285 QMAQ-PAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS-YSTNLAY 231
+ + I L Y ++ ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 132 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWY 190
Query: 232 TPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPS 267
PE + N ++V I+S G ++ +LL+G+ + P
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 23/200 (11%)
Query: 75 VSESGEKAANVVYKGRLE---NRQWIAVKKFTKVAWPDPTQ--FKEEAEGVGKLRRKRLA 129
V E GE V GRL+ R+ K K + D + F EA +G+ +
Sbjct: 24 VGEFGE-----VCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQ--TIEWPLRLRVAFYIAEALDYCNTE 187
+L G +++ EYM N +L L + + I+ LR I + Y ++
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYL-SD 134
Query: 188 GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KSYSTN-----LAYTPPEYLKNG 240
++ DL A +L + + ++S FG+ + D +Y+T + +T PE +
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 194
Query: 241 RVIPESVIYSFGTVLLDLLS 260
+ S ++S+G V+ +++S
Sbjct: 195 KFTSASDVWSYGIVMWEVMS 214
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS-YSTNLAY 231
+ + I L Y ++ ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWY 188
Query: 232 TPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPS 267
PE + N ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 103/275 (37%), Gaps = 24/275 (8%)
Query: 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRR 125
+F N +++ E + ++KGR + I VK W F EE +
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGND-IVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 126 KRLANLIGYCCA--GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDY 183
+ ++G C + L+ + P +L L ++ ++ A A +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAF 126
Query: 184 CNTEGRPLY--HDLNAYRVLFDEDGDPRLSCFGL-MKNSMDGKSYSTNLAYTPPEYLKNG 240
+T PL H LN+ V DED R+S + G+ Y+ A+ PE L+
Sbjct: 127 LHTL-EPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAP--AWVAPEALQKK 183
Query: 241 RVIPESV------IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEE 294
PE +SF +L +L++ + +P + + G + L L
Sbjct: 184 ---PEDTNRRSADXWSFAVLLWELVT-REVPFADLSNXEIGXKVAL---EGLRPTIPPGI 236
Query: 295 ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329
+ V L C +P +RP +V L + Q K
Sbjct: 237 SPHVSKLXKICXNEDPAKRPKFDXIVPILEKXQDK 271
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 23/200 (11%)
Query: 75 VSESGEKAANVVYKGRLE---NRQWIAVKKFTKVAWPDPTQ--FKEEAEGVGKLRRKRLA 129
V E GE V GRL+ R+ K K + D + F EA +G+ +
Sbjct: 18 VGEFGE-----VCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQ--TIEWPLRLRVAFYIAEALDYCNTE 187
+L G +++ EYM N +L L + + I+ LR I + Y ++
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYL-SD 128
Query: 188 GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KSYSTN-----LAYTPPEYLKNG 240
++ DL A +L + + ++S FG+ + D +Y+T + +T PE +
Sbjct: 129 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 188
Query: 241 RVIPESVIYSFGTVLLDLLS 260
+ S ++S+G V+ +++S
Sbjct: 189 KFTSASDVWSYGIVMWEVMS 208
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPES 246
+Y DL VL D+DG+ R+S GL G++ + A TP PE L
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSV 370
Query: 247 VIYSFGTVLLDLLSGK 262
++ G L ++++ +
Sbjct: 371 DYFALGVTLYEMIAAR 386
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 73/173 (42%), Gaps = 11/173 (6%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG--YCCAGDERLLVAEYMPNDTLA 154
+AVK+ F+ E + + L + G Y E LV EY+P+ L
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCL- 97
Query: 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214
+ + ++ L + I + ++Y + R ++ DL A +L + + +++ FG
Sbjct: 98 RDFLQRHRARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFG 156
Query: 215 LMK-------NSMDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
L K + + + + + PE L + +S ++SFG VL +L +
Sbjct: 157 LAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPES 246
+Y DL VL D+DG+ R+S GL G++ + A TP PE L
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSV 370
Query: 247 VIYSFGTVLLDLLSGK 262
++ G L ++++ +
Sbjct: 371 DYFALGVTLYEMIAAR 386
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS-YSTNLAY 231
+ + I L Y ++ ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 135 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 193
Query: 232 TPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPS 267
PE + N ++V I+S G ++ +LL+G+ + P
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS-YSTNLAY 231
+ + I L Y ++ ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 135 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 193
Query: 232 TPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPS 267
PE + N ++V I+S G ++ +LL+G+ + P
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPES 246
+Y DL VL D+DG+ R+S GL G++ + A TP PE L
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSV 370
Query: 247 VIYSFGTVLLDLLSGK 262
++ G L ++++ +
Sbjct: 371 DYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPES 246
+Y DL VL D+DG+ R+S GL G++ + A TP PE L
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSV 370
Query: 247 VIYSFGTVLLDLLSGK 262
++ G L ++++ +
Sbjct: 371 DYFALGVTLYEMIAAR 386
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 38 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 97
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + Y ++ + ++
Sbjct: 98 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVH 155
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + S + + + E L+ +
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTT 215
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 216 KSDVWSFGVLLWELMT-RGAPP 236
>pdb|3SZ7|A Chain A, Crystal Structure Of The Sgt2 Tpr Domain From Aspergillus
Fumigatus
Length = 164
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 403 RKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQC 462
+ +G+ A K++ AID Y+Q +++ +P + R+ + S + + A DA A
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQALSI-APANPIYLSNRAAAYSASGQHEKAAEDAELATV 73
Query: 463 AHPDWPTAFYMQSVALSKLDM 483
P + A+ + L++ DM
Sbjct: 74 VDPKYSKAW--SRLGLARFDM 92
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 179 EALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLM---------KNSMDGKSYSTNL 229
+AL+Y + + + ++ DL A +LF DGD +L+ FG+ ++S G Y
Sbjct: 146 DALNYLH-DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAP 204
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR 274
E K+ ++ ++S G L+++ + PP H L+ +R
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS-YSTNLAY 231
+ + I L Y ++ ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 188
Query: 232 TPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPS 267
PE + N ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2DBA|A Chain A, The Solution Structure Of The Tetratrico Peptide Repeat Of
Human Smooth Muscle Cell Associated Protein-1, Isoform 2
Length = 148
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 403 RKQGDTAFRDKDFKTAIDYYSQFINVNIMV--SPTVYARRSLCHLFSDRSDAALLDAMQA 460
RK+G+ F+ D+ A+ Y+Q + ++ ++ R+ CHL + D A +A +A
Sbjct: 32 RKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91
Query: 461 QCAHPDWPTAFYMQSVALSKL 481
A Y +S AL KL
Sbjct: 92 IEKDGGDVKALYRRSQALEKL 112
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 179 EALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLM---------KNSMDGKSYSTNL 229
+AL+Y + + + ++ DL A +LF DGD +L+ FG+ ++S G Y
Sbjct: 146 DALNYLH-DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAP 204
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR 274
E K+ ++ ++S G L+++ + PP H L+ +R
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS-YSTNLAY 231
+ + I L Y ++ ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 141 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 199
Query: 232 TPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPS 267
PE + N ++V I+S G ++ +LL+G+ + P
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 236
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 87/221 (39%), Gaps = 38/221 (17%)
Query: 128 LANLIGYCCAGDERLLVAEYMPNDTLAKHL------FHWEKQT----------IEWPLRL 171
+ NL+G C G L++ EY L L F K + ++ L
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
++ +A+ + + ++ ++ DL A +L ++ FGL ++ + +Y
Sbjct: 167 SFSYQVAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALD-----MIRGENLN 279
+ + PE + N ES ++S+G L +L S P P +D MI+ E
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK-EGFR 284
Query: 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+L H ++ + C +P +RP+ K +V
Sbjct: 285 MLSPEH--------APAEMYDIMKTCWDADPLKRPTFKQIV 317
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 16/161 (9%)
Query: 174 AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN----- 228
A+ ++ AL Y ++ R ++ D+ A VL +L FGL + D Y +
Sbjct: 117 AYQLSTALAYLESK-RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG 288
+ + PE + R S ++ FG + ++L H + +G N ++ G
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGVKPFQGVKNNDVIGRIENG 228
Query: 289 K---FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ + L ++C Y+P RP L L+ +
Sbjct: 229 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/220 (17%), Positives = 85/220 (38%), Gaps = 24/220 (10%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR------------- 170
+ + + NL+G C G L++ EY L L +E+
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 171 -LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN- 228
L + +A+ + + ++ ++ D+ A VL ++ FGL ++ M+ +Y
Sbjct: 168 LLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 229 -----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD 283
+ + PE + + +S ++S+G +L ++ S P L + + L+ D
Sbjct: 227 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL--VNSKFYKLVKD 284
Query: 284 SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ + + + + C EP RP+ + + L
Sbjct: 285 GYQMAQ-PAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 323
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED 205
EY N TL L H E + R+ I EAL Y +++G ++ DL + DE
Sbjct: 95 EYCENGTLYD-LIHSENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDES 152
Query: 206 GDPRLSCFGLMKN 218
+ ++ FGL KN
Sbjct: 153 RNVKIGDFGLAKN 165
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 16/161 (9%)
Query: 174 AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL---MKNSMDGKSYSTNL- 229
A+ ++ AL Y ++ R ++ D+ A VL + +L FGL M++S K+ L
Sbjct: 117 AYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLP 175
Query: 230 -AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG 288
+ PE + R S ++ FG + ++L H + +G N ++ G
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGVKPFQGVKNNDVIGRIENG 228
Query: 289 K---FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ + L ++C Y+P RP L L+ +
Sbjct: 229 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 87/221 (39%), Gaps = 38/221 (17%)
Query: 128 LANLIGYCCAGDERLLVAEYMPNDTLAKHL------FHWEKQT----------IEWPLRL 171
+ NL+G C G L++ EY L L F K + ++ L
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
++ +A+ + + ++ ++ DL A +L ++ FGL ++ + +Y
Sbjct: 149 SFSYQVAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALD-----MIRGENLN 279
+ + PE + N ES ++S+G L +L S P P +D MI+ E
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK-EGFR 266
Query: 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+L H ++ + C +P +RP+ K +V
Sbjct: 267 MLSPEH--------APAEMYDIMKTCWDADPLKRPTFKQIV 299
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTI-EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVL 201
LV E++ N+T K L+ QT+ ++ +R + + I +ALDYC++ G ++ D+ + VL
Sbjct: 111 LVFEHV-NNTDFKQLY----QTLTDYDIRFYM-YEILKALDYCHSMG-IMHRDVKPHNVL 163
Query: 202 FD-EDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPESV-IYSFGTVLL 256
D E RL +GL + G+ Y+ +A + PE L + ++ S+ ++S G +L
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 257 DLLSGKHIPPSHALD 271
++ K P H D
Sbjct: 224 SMIFRKE-PFFHGHD 237
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 179 EALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL-MKNSMDGKSYSTNLAYTP---- 233
+AL+Y + + + ++ DL A +LF DGD +L+ FG+ KN+ + TP
Sbjct: 119 DALNYLH-DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMA 177
Query: 234 PEYL-----KNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR 274
PE + K+ ++ ++S G L+++ + PP H L+ +R
Sbjct: 178 PEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 221
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 87/221 (39%), Gaps = 38/221 (17%)
Query: 128 LANLIGYCCAGDERLLVAEYMPNDTLAKHL------FHWEKQT----------IEWPLRL 171
+ NL+G C G L++ EY L L F K + ++ L
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
++ +A+ + + ++ ++ DL A +L ++ FGL ++ + +Y
Sbjct: 172 SFSYQVAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALD-----MIRGENLN 279
+ + PE + N ES ++S+G L +L S P P +D MI+ E
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK-EGFR 289
Query: 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+L H ++ + C +P +RP+ K +V
Sbjct: 290 MLSPEH--------APAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 21/170 (12%)
Query: 171 LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-- 228
+ A+ I++ + Y E + ++ DL A +L E ++S FGL ++ + S
Sbjct: 153 ISFAWQISQGMQYL-AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQ 211
Query: 229 ----LAYTPPEYLKNGRVIPESVIYSFGTVLLDL--LSGK---HIPPSHALDMIRGENLN 279
+ + E L + +S ++SFG +L ++ L G IPP ++++ +
Sbjct: 212 GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM 271
Query: 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329
D+ SEE + L QC + EP +RP ++ L ++ K
Sbjct: 272 ERPDN------CSEEMYR---LMLQCWKQEPDKRPVFADISKDLEKMMVK 312
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 87/221 (39%), Gaps = 38/221 (17%)
Query: 128 LANLIGYCCAGDERLLVAEYMPNDTLAKHL------FHWEKQT----------IEWPLRL 171
+ NL+G C G L++ EY L L F K + ++ L
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--- 228
++ +A+ + + ++ ++ DL A +L ++ FGL ++ + +Y
Sbjct: 172 SFSYQVAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 229 ---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALD-----MIRGENLN 279
+ + PE + N ES ++S+G L +L S P P +D MI+ E
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK-EGFR 289
Query: 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+L H ++ + C +P +RP+ K +V
Sbjct: 290 MLSPEH--------APAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 16/161 (9%)
Query: 174 AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP 233
A+ ++ AL Y ++ R ++ D+ A VL +L FGL + D Y + P
Sbjct: 497 AYQLSTALAYLESK-RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 555
Query: 234 -----PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG 288
PE + R S ++ FG + ++L H + +G N ++ G
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGVKPFQGVKNNDVIGRIENG 608
Query: 289 K---FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ + L ++C Y+P RP L L+ +
Sbjct: 609 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 127/304 (41%), Gaps = 54/304 (17%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+V + G+ V+ G+ + +AVK F + + F+E + + R N++G
Sbjct: 41 MVKQIGKGRYGEVWMGKWRGEK-VAVKVFFTTE--EASWFRETE--IYQTVLMRHENILG 95
Query: 134 YCCAG-------DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT 186
+ A + L+ +Y N +L +L + T++ L++A+ L + +T
Sbjct: 96 FIAADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHT 152
Query: 187 E-----GRPL--YHDLNAYRVLFDEDGDPRLSCFGLM------KNSMD--GKSYSTNLAY 231
E G+P + DL + +L ++G ++ GL N +D + Y
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRY 212
Query: 232 TPPEYLKNG--RVIPESVI----YSFGTVLLDL----LSGKHIP----PSHAL------- 270
PPE L R +S I YSFG +L ++ +SG + P H L
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSY 272
Query: 271 -DMIRGENLNLLMDSHLEGKFSSEEATQVVG-LASQCLQYEPRERPSTKNLVVTLARLQT 328
DM + L S ++SS+E + +G L ++C + P R + + TLA++
Sbjct: 273 EDMREIVCIKKLRPS-FPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331
Query: 329 KSDV 332
D+
Sbjct: 332 SQDI 335
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 26/198 (13%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGK--LRRKRL------AN 130
GE VYK R +N I K K+ E +G+ + LR +L N
Sbjct: 19 GEGQFATVYKARDKNTNQIVAIKKIKLG-----HRSEAKDGINRTALREIKLLQELSHPN 73
Query: 131 LIGYCCAGDERL---LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIA-EALDYCNT 186
+IG A + LV ++M D + + + P ++ + + L+Y +
Sbjct: 74 IIGLLDAFGHKSNISLVFDFMETDL---EVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 187 EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN-SMDGKSYSTNLA---YTPPEYLKNGRV 242
L+ DL +L DE+G +L+ FGL K+ ++Y + Y PE L R+
Sbjct: 131 HWI-LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARM 189
Query: 243 IPESV-IYSFGTVLLDLL 259
V +++ G +L +LL
Sbjct: 190 YGVGVDMWAVGCILAELL 207
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED 205
EY N TL L H E + R+ I EAL Y +++G ++ DL + DE
Sbjct: 95 EYCENRTLYD-LIHSENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDES 152
Query: 206 GDPRLSCFGLMKN 218
+ ++ FGL KN
Sbjct: 153 RNVKIGDFGLAKN 165
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 19/106 (17%)
Query: 171 LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK------- 223
L + IAEA+++ +++G ++ DL + F D ++ FGL+ +MD
Sbjct: 167 LHIFIQIAEAVEFLHSKGL-MHRDLKPSNIFFTMDDVVKVGDFGLV-TAMDQDEEEQTVL 224
Query: 224 ----SYSTNLA------YTPPEYLKNGRVIPESVIYSFGTVLLDLL 259
+Y+T+ Y PE + + I+S G +L +LL
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 26/172 (15%)
Query: 163 QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222
QTI + ++A I +AL++ +++ ++ D+ VL + G + FG+ +D
Sbjct: 131 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD 190
Query: 223 KSYSTNLAYTPPEYLKNGRVIPE---------SVIYSFGTVLLDLLSGKH------IPPS 267
+ + P Y R+ PE S I+S G ++L + P
Sbjct: 191 VAKDIDAGCKP--YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQ 248
Query: 268 HALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319
++ + L D KFS+E V SQCL+ +ERP+ L
Sbjct: 249 QLKQVVEEPSPQLPAD-----KFSAE----FVDFTSQCLKKNSKERPTYPEL 291
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFD-EDGDPRLSCFGLMKNSMDGKSYSTN 228
+ FY+ E ALDYC++ G ++ D+ + V+ D E RL +GL + G+ Y+
Sbjct: 133 IRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR 191
Query: 229 LA---YTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALD 271
+A + PE L + ++ S+ ++S G +L ++ K P H D
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHD 237
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFD-EDGDPRLSCFGLMKNSMDGKSYSTN 228
+ FY+ E ALDYC++ G ++ D+ + V+ D E RL +GL + G+ Y+
Sbjct: 133 IRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR 191
Query: 229 LA---YTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALD 271
+A + PE L + ++ S+ ++S G +L ++ K P H D
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHD 237
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTI-EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVL 201
LV E++ N+T K L+ QT+ ++ +R + + I +ALDYC++ G ++ D+ + V+
Sbjct: 111 LVFEHV-NNTDFKQLY----QTLTDYDIRFYM-YEILKALDYCHSMG-IMHRDVKPHNVM 163
Query: 202 FD-EDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPESV-IYSFGTVLL 256
D E RL +GL + G+ Y+ +A + PE L + ++ S+ ++S G +L
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 257 DLLSGKHIPPSHALD 271
++ K P H D
Sbjct: 224 SMIFRKE-PFFHGHD 237
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTI-EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVL 201
LV E++ N+T K L+ QT+ ++ +R + + I +ALDYC++ G ++ D+ + V+
Sbjct: 111 LVFEHV-NNTDFKQLY----QTLTDYDIRFYM-YEILKALDYCHSMG-IMHRDVKPHNVM 163
Query: 202 FD-EDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPESV-IYSFGTVLL 256
D E RL +GL + G+ Y+ +A + PE L + ++ S+ ++S G +L
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 257 DLLSGKHIPPSHALD 271
++ K P H D
Sbjct: 224 SMIFRKE-PFFHGHD 237
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTI-EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVL 201
LV E++ N+T K L+ QT+ ++ +R + + I +ALDYC++ G ++ D+ + V+
Sbjct: 111 LVFEHV-NNTDFKQLY----QTLTDYDIRFYM-YEILKALDYCHSMG-IMHRDVKPHNVM 163
Query: 202 FD-EDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPESV-IYSFGTVLL 256
D E RL +GL + G+ Y+ +A + PE L + ++ S+ ++S G +L
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 257 DLLSGKHIPPSHALD 271
++ K P H D
Sbjct: 224 SMIFRKE-PFFHGHD 237
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTI-EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVL 201
LV E++ N+T K L+ QT+ ++ +R + + I +ALDYC++ G ++ D+ + V+
Sbjct: 110 LVFEHV-NNTDFKQLY----QTLTDYDIRFYM-YEILKALDYCHSMG-IMHRDVKPHNVM 162
Query: 202 FD-EDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPESV-IYSFGTVLL 256
D E RL +GL + G+ Y+ +A + PE L + ++ S+ ++S G +L
Sbjct: 163 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 222
Query: 257 DLLSGKHIPPSHALD 271
++ K P H D
Sbjct: 223 SMIFRKE-PFFHGHD 236
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTI-EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVL 201
LV E++ N+T K L+ QT+ ++ +R + + I +ALDYC++ G ++ D+ + V+
Sbjct: 111 LVFEHV-NNTDFKQLY----QTLTDYDIRFYM-YEILKALDYCHSMG-IMHRDVKPHNVM 163
Query: 202 FD-EDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPESV-IYSFGTVLL 256
D E RL +GL + G+ Y+ +A + PE L + ++ S+ ++S G +L
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 257 DLLSGKHIPPSHALD 271
++ K P H D
Sbjct: 224 SMIFRKE-PFFHGHD 237
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTI-EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVL 201
LV E++ N+T K L+ QT+ ++ +R + + I +ALDYC++ G ++ D+ + V+
Sbjct: 111 LVFEHV-NNTDFKQLY----QTLTDYDIRFYM-YEILKALDYCHSMG-IMHRDVKPHNVM 163
Query: 202 FD-EDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPESV-IYSFGTVLL 256
D E RL +GL + G+ Y+ +A + PE L + ++ S+ ++S G +L
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 257 DLLSGKHIPPSHALD 271
++ K P H D
Sbjct: 224 SMIFRKE-PFFHGHD 237
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTI-EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVL 201
LV E++ N+T K L+ QT+ ++ +R + + I +ALDYC++ G ++ D+ + V+
Sbjct: 111 LVFEHV-NNTDFKQLY----QTLTDYDIRFYM-YEILKALDYCHSMG-IMHRDVKPHNVM 163
Query: 202 FD-EDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPESV-IYSFGTVLL 256
D E RL +GL + G+ Y+ +A + PE L + ++ S+ ++S G +L
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 257 DLLSGKHIPPSHALD 271
++ K P H D
Sbjct: 224 SMIFRKE-PFFHGHD 237
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTI-EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVL 201
LV E++ N+T K L+ QT+ ++ +R + + I +ALDYC++ G ++ D+ + V+
Sbjct: 111 LVFEHV-NNTDFKQLY----QTLTDYDIRFYM-YEILKALDYCHSMG-IMHRDVKPHNVM 163
Query: 202 FD-EDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPESV-IYSFGTVLL 256
D E RL +GL + G+ Y+ +A + PE L + ++ S+ ++S G +L
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 257 DLLSGKHIPPSHALD 271
++ K P H D
Sbjct: 224 SMIFRKE-PFFHGHD 237
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTI-EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVL 201
LV E++ N+T K L+ QT+ ++ +R + + I +ALDYC++ G ++ D+ + V+
Sbjct: 111 LVFEHV-NNTDFKQLY----QTLTDYDIRFYM-YEILKALDYCHSMG-IMHRDVKPHNVM 163
Query: 202 FD-EDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPESV-IYSFGTVLL 256
D E RL +GL + G+ Y+ +A + PE L + ++ S+ ++S G +L
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 257 DLLSGKHIPPSHALD 271
++ K P H D
Sbjct: 224 SMIFRKE-PFFHGHD 237
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTI-EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVL 201
LV E++ N+T K L+ QT+ ++ +R + + I +ALDYC++ G ++ D+ + V+
Sbjct: 110 LVFEHV-NNTDFKQLY----QTLTDYDIRFYM-YEILKALDYCHSMG-IMHRDVKPHNVM 162
Query: 202 FD-EDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPESV-IYSFGTVLL 256
D E RL +GL + G+ Y+ +A + PE L + ++ S+ ++S G +L
Sbjct: 163 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 222
Query: 257 DLLSGKHIPPSHALD 271
++ K P H D
Sbjct: 223 SMIFRKE-PFFHGHD 236
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 179 EALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----P 234
+AL+Y + + + ++ DL A +LF DGD +L+ FG+ + TP P
Sbjct: 146 DALNYLH-DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAP 204
Query: 235 EYL-----KNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR 274
E + K+ ++ ++S G L+++ + PP H L+ +R
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTI-EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVL 201
LV E++ N+T K L+ QT+ ++ +R + + I +ALDYC++ G ++ D+ + V+
Sbjct: 116 LVFEHV-NNTDFKQLY----QTLTDYDIRFYM-YEILKALDYCHSMG-IMHRDVKPHNVM 168
Query: 202 FD-EDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPESV-IYSFGTVLL 256
D E RL +GL + G+ Y+ +A + PE L + ++ S+ ++S G +L
Sbjct: 169 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 228
Query: 257 DLLSGKHIPPSHALD 271
++ K P H D
Sbjct: 229 SMIFRKE-PFFHGHD 242
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTI-EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVL 201
LV E++ N+T K L+ QT+ ++ +R + + I +ALDYC++ G ++ D+ + V+
Sbjct: 109 LVFEHV-NNTDFKQLY----QTLTDYDIRFYM-YEILKALDYCHSMG-IMHRDVKPHNVM 161
Query: 202 FD-EDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPESV-IYSFGTVLL 256
D E RL +GL + G+ Y+ +A + PE L + ++ S+ ++S G +L
Sbjct: 162 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 221
Query: 257 DLLSGKHIPPSHALD 271
++ K P H D
Sbjct: 222 SMIFRKE-PFFHGHD 235
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 40 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 99
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + + ++ + ++
Sbjct: 100 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVH 157
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ +D + S + + + E L+ +
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 217
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 218 KSDVWSFGVLLWELMT-RGAPP 238
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 175 FYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAY 231
FY AE AL+Y +++ +Y DL +L D++G +++ FG K D + L
Sbjct: 110 FYAAEVCLALEYLHSKDI-IYRDLKPENILLDKNGHIKITDFGFAKYVPD---VTYXLCG 165
Query: 232 TP----PEYLKNGRVIPESVIYSFGTVLLDLLSG 261
TP PE + +SFG ++ ++L+G
Sbjct: 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 171 LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-- 228
+ A+ I++ + Y E ++ DL A +L E ++S FGL ++ + S
Sbjct: 153 ISFAWQISQGMQYL-AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQ 211
Query: 229 ----LAYTPPEYLKNGRVIPESVIYSFGTVLLDL--LSGK---HIPPSHALDMIRGENLN 279
+ + E L + +S ++SFG +L ++ L G IPP ++++ +
Sbjct: 212 GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM 271
Query: 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329
D+ SEE + L QC + EP +RP ++ L ++ K
Sbjct: 272 ERPDN------CSEEMYR---LMLQCWKQEPDKRPVFADISKDLEKMMVK 312
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 28/201 (13%)
Query: 74 IVSESGEKAANVVYKGRL--ENRQ-W-IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLA 129
I ++GE+ A + L +NR+ W + ++ K+ P+ +E +G+ KL
Sbjct: 35 IHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKL------ 88
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEK--QTIEWPLRLRVAFYIAEALDYCNTE 187
D LL EY L K+L +E E P+R ++ I+ AL Y + E
Sbjct: 89 ------APNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLH-E 140
Query: 188 GRPLYHDLNAYRVLFDEDGDPRLSC----FGLMKNSMDGK---SYSTNLAYTPPEYLKNG 240
R ++ DL ++ + G RL G K G+ + L Y PE L+
Sbjct: 141 NRIIHRDLKPENIVL-QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQK 199
Query: 241 RVIPESVIYSFGTVLLDLLSG 261
+ +SFGT+ + ++G
Sbjct: 200 KYTVTVDYWSFGTLAFECITG 220
>pdb|1MDX|A Chain A, Crystal Structure Of Arnb Transferase With Pyridoxal 5'
Phosphate
pdb|1MDZ|A Chain A, Crystal Structure Of Arnb Aminotransferase With
Cycloserine And Pyridoxal 5' Phosphate
Length = 393
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 315 STKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQ-RPLSPLAEACSRMDLTAIHQI 372
ST N++V L DV + ++ +H EA TPQ + + P+ A + DL AI+ +
Sbjct: 91 STLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPVHYAGAPADLDAIYAL 149
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 28/201 (13%)
Query: 74 IVSESGEKAANVVYKGRL--ENRQ-W-IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLA 129
I ++GE+ A + L +NR+ W + ++ K+ P+ +E +G+ KL
Sbjct: 34 IHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKL------ 87
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEK--QTIEWPLRLRVAFYIAEALDYCNTE 187
D LL EY L K+L +E E P+R ++ I+ AL Y + E
Sbjct: 88 ------APNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLH-E 139
Query: 188 GRPLYHDLNAYRVLFDEDGDPRLSC----FGLMKNSMDGK---SYSTNLAYTPPEYLKNG 240
R ++ DL ++ + G RL G K G+ + L Y PE L+
Sbjct: 140 NRIIHRDLKPENIVL-QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQK 198
Query: 241 RVIPESVIYSFGTVLLDLLSG 261
+ +SFGT+ + ++G
Sbjct: 199 KYTVTVDYWSFGTLAFECITG 219
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSMDGKSYSTN 228
+ +YI E ALDYC+++G ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 128 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 186
Query: 229 LA---YTPPEYL 237
+A + PE L
Sbjct: 187 VASRYFKGPELL 198
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSMDGKSYSTN 228
+ +YI E ALDYC+++G ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 148 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 206
Query: 229 LA---YTPPEYL 237
+A + PE L
Sbjct: 207 VASRYFKGPELL 218
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED 205
EY N TL L H E + R+ I EAL Y +++G ++ +L + DE
Sbjct: 95 EYCENRTLYD-LIHSENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRNLKPXNIFIDES 152
Query: 206 GDPRLSCFGLMKN 218
+ ++ FGL KN
Sbjct: 153 RNVKIGDFGLAKN 165
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSMDGKSYSTN 228
+ +YI E ALDYC+++G ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 128 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 186
Query: 229 LA---YTPPEYL 237
+A + PE L
Sbjct: 187 VASRYFKGPELL 198
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSMDGKSYSTN 228
+ +YI E ALDYC+++G ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 229 LA---YTPPEYL 237
+A + PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 19/136 (13%)
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---KSYSTNLAYTPPEYLK------NGR 241
++ DL +L D++ RLS FG + G + Y PE LK +
Sbjct: 222 VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPG 281
Query: 242 VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEE----ATQ 297
E +++ G +L LL+G PP R + L L M + +FSS E ++
Sbjct: 282 YGKEVDLWACGVILFTLLAGS--PPFWH----RRQILMLRMIMEGQYQFSSPEWDDRSST 335
Query: 298 VVGLASQCLQYEPRER 313
V L S+ LQ +P R
Sbjct: 336 VKDLISRLLQVDPEAR 351
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSMDGKSYSTN 228
+ +YI E ALDYC+++G ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 129 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 187
Query: 229 LA---YTPPEYL 237
+A + PE L
Sbjct: 188 VASRYFKGPELL 199
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSMDGKSYSTN 228
+ +YI E ALDYC+++G ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 229 LA---YTPPEYL 237
+A + PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSMDGKSYSTN 228
+ +YI E ALDYC+++G ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 229 LA---YTPPEYL 237
+A + PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSMDGKSYSTN 228
+ +YI E ALDYC+++G ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 229 LA---YTPPEYL 237
+A + PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLF---DEDGDPRLSCFGLMKNSMDGKSYSTN 228
R+ F + +A+ Y + G ++ DL +L+ DED +S FGL K G ST
Sbjct: 120 RLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 229 L---AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPP 266
Y PE L +S G + LL G PP
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPP 217
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDLNAYR 199
LV EY+ N KQ + + FY+ E ALDYC+++G ++ D+ +
Sbjct: 112 LVFEYINNTDF--------KQLYQILTDFDIRFYMYELLKALDYCHSKG-IMHRDVKPHN 162
Query: 200 VLFD-EDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPESV-IYSFGTV 254
V+ D + RL +GL + + Y+ +A + PE L + ++ S+ ++S G +
Sbjct: 163 VMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 222
Query: 255 LLDLL 259
L ++
Sbjct: 223 LASMI 227
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSMDGKSYSTN 228
+ +YI E ALDYC+++G ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 229 LA---YTPPEYL 237
+A + PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSMDGKSYSTN 228
+ +YI E ALDYC+++G ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 229 LA---YTPPEYL 237
+A + PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas
pdb|1W0I|B Chain B, Arabidopsis Thaliana Mitochondrial Kas
pdb|2IX4|A Chain A, Arabidopsis Thaliana Mitochondrial Beta-Ketoacyl Acp
Synthase Hexanoic Acid Complex
pdb|2IX4|B Chain B, Arabidopsis Thaliana Mitochondrial Beta-Ketoacyl Acp
Synthase Hexanoic Acid Complex
Length = 431
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 123 LRRKRLANLIGYC-CAGDERLLVAEYMPND 151
L K +AN IGY CA DE L AE++P +
Sbjct: 80 LNSKAVANFIGYAVCAADEALRDAEWLPTE 109
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLF---DEDGDPRLSCFGLMKNSMDGKSYSTN 228
R+ F + +A+ Y + G ++ DL +L+ DED +S FGL K G ST
Sbjct: 120 RLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 229 L---AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPP 266
Y PE L +S G + LL G PP
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPP 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLF---DEDGDPRLSCFGLMKNSMDGKSYSTN 228
R+ F + +A+ Y + G ++ DL +L+ DED +S FGL K G ST
Sbjct: 120 RLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 229 L---AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPP 266
Y PE L +S G + LL G PP
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPP 217
>pdb|1N3L|A Chain A, Crystal Structure Of A Human Aminoacyl-Trna Synthetase
Cytokine
pdb|1Q11|A Chain A, Crystal Structure Of An Active Fragment Of Human
Tyrosyl-Trna Synthetase With Tyrosinol
Length = 372
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 16/87 (18%)
Query: 52 PLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAV------------ 99
PL SEF L N + V + AA VV+ G L+N +A+
Sbjct: 270 PLKSEFVILRDEKWGGNKTYTAYVDLEKDFAAEVVHPGDLKNSVEVALNKLLDPIREKFN 329
Query: 100 ----KKFTKVAWPDPTQFKEEAEGVGK 122
KK A+PDP++ K A+G K
Sbjct: 330 TPALKKLASAAYPDPSKQKPMAKGPAK 356
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDLNAYR 199
LV EY+ N KQ + + FY+ E ALDYC+++G ++ D+ +
Sbjct: 117 LVFEYINNTDF--------KQLYQILTDFDIRFYMYELLKALDYCHSKG-IMHRDVKPHN 167
Query: 200 VLFD-EDGDPRLSCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPESV-IYSFGTV 254
V+ D + RL +GL + + Y+ +A + PE L + ++ S+ ++S G +
Sbjct: 168 VMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 227
Query: 255 LLDLL 259
L ++
Sbjct: 228 LASMI 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 98 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 157
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + + ++ + ++
Sbjct: 158 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVH 215
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + S + + + E L+ +
Sbjct: 216 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 275
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 276 KSDVWSFGVLLWELMT-RGAPP 296
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 162 KQTIEWPLRLRV----AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217
K+ ++ P+ R+ I +AL Y + ++ D+ +L DE G +L FG+
Sbjct: 114 KKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISG 173
Query: 218 NSMDGKSYSTN---LAYTPPEYLKNGRVIP----------ESVIYSFGTVLLDLLSGK 262
+D K+ + AY PE R+ P + ++S G L++L +G+
Sbjct: 174 RLVDDKAKDRSAGCAAYMAPE-----RIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 39 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 98
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + + ++ + ++
Sbjct: 99 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVH 156
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + S + + + E L+ +
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 217 KSDVWSFGVLLWELMT-RGAPP 237
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLF---DEDGDPRLSCFGLMKNSMDGKSYSTN 228
R+ F + +A+ Y + G ++ DL +L+ DED +S FGL K G ST
Sbjct: 120 RLIFQVLDAVKYLHDLGI-VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 229 L---AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPP 266
Y PE L +S G + LL G PP
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPP 217
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 40 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 99
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + + ++ + ++
Sbjct: 100 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVH 157
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + S + + + E L+ +
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 217
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 218 KSDVWSFGVLLWELMT-RGAPP 238
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 37 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 96
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + + ++ + ++
Sbjct: 97 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVH 154
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + S + + + E L+ +
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 214
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 215 KSDVWSFGVLLWELMT-RGAPP 235
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 44 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 103
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + + ++ + ++
Sbjct: 104 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVH 161
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + S + + + E L+ +
Sbjct: 162 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 221
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 222 KSDVWSFGVLLWELMT-RGAPP 242
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 79 GEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIG 133
G VY G L + + AVK ++ + +QF E + + +L+G
Sbjct: 39 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 98
Query: 134 YCCAGDER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
C + L+V YM + L ++ E + +A+ + + ++ + ++
Sbjct: 99 ICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVH 156
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIP 244
DL A + DE +++ FGL ++ D + S + + + E L+ +
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 245 ESVIYSFGTVLLDLLSGKHIPP 266
+S ++SFG +L +L++ + PP
Sbjct: 217 KSDVWSFGVLLWELMT-RGAPP 237
>pdb|1MJG|A Chain A, Crystal Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL-Coa Synthase(CodhACS) FROM MOORELLA
Thermoacetica (F. Clostridium Thermoaceticum)
pdb|1MJG|B Chain B, Crystal Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL-Coa Synthase(CodhACS) FROM MOORELLA
Thermoacetica (F. Clostridium Thermoaceticum)
pdb|1MJG|C Chain C, Crystal Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL-Coa Synthase(CodhACS) FROM MOORELLA
Thermoacetica (F. Clostridium Thermoaceticum)
pdb|1MJG|D Chain D, Crystal Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL-Coa Synthase(CodhACS) FROM MOORELLA
Thermoacetica (F. Clostridium Thermoaceticum)
pdb|1OAO|A Chain A, Nizn[fe4s4] And Nini[fe4s4] Clusters In Closed And Open
Alpha Subunits Of Acetyl-Coa SynthaseCARBON MONOXIDE
Dehydrogenase
pdb|1OAO|B Chain B, Nizn[fe4s4] And Nini[fe4s4] Clusters In Closed And Open
Alpha Subunits Of Acetyl-Coa SynthaseCARBON MONOXIDE
Dehydrogenase
pdb|2Z8Y|A Chain A, Xenon-Bound Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL-Coa Synthase(CodhACS) FROM MOORELLA
Thermoacetica
pdb|2Z8Y|B Chain B, Xenon-Bound Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL-Coa Synthase(CodhACS) FROM MOORELLA
Thermoacetica
pdb|2Z8Y|C Chain C, Xenon-Bound Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL-Coa Synthase(CodhACS) FROM MOORELLA
Thermoacetica
pdb|2Z8Y|D Chain D, Xenon-Bound Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL-Coa Synthase(CodhACS) FROM MOORELLA
Thermoacetica
pdb|3I01|A Chain A, Native Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL- Coa Synthase From Moorella
Thermoacetica, Water-Bound C-Cluster.
pdb|3I01|B Chain B, Native Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL- Coa Synthase From Moorella
Thermoacetica, Water-Bound C-Cluster.
pdb|3I01|C Chain C, Native Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL- Coa Synthase From Moorella
Thermoacetica, Water-Bound C-Cluster.
pdb|3I01|D Chain D, Native Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL- Coa Synthase From Moorella
Thermoacetica, Water-Bound C-Cluster
Length = 674
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 111 TQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143
Q E EG K + NL+G CC G+E L+
Sbjct: 292 VQAAREMEGEAKAAGAKGINLVGICCTGNEVLM 324
>pdb|3I04|A Chain A, Cyanide-Bound Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL-Coa Synthase From Moorella
Thermoacetica, Cyanide-Bound C-Cluster
pdb|3I04|B Chain B, Cyanide-Bound Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL-Coa Synthase From Moorella
Thermoacetica, Cyanide-Bound C-Cluster
pdb|3I04|C Chain C, Cyanide-Bound Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL-Coa Synthase From Moorella
Thermoacetica, Cyanide-Bound C-Cluster
pdb|3I04|D Chain D, Cyanide-Bound Structure Of Bifunctional Carbon Monoxide
DehydrogenaseACETYL-Coa Synthase From Moorella
Thermoacetica, Cyanide-Bound C-Cluster
Length = 673
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 111 TQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143
Q E EG K + NL+G CC G+E L+
Sbjct: 291 VQAAREMEGEAKAAGAKGINLVGICCTGNEVLM 323
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 118/311 (37%), Gaps = 55/311 (17%)
Query: 85 VVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144
V+ R NR+ ++ + P+ Q + +G+ R+ + + V
Sbjct: 56 VIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNV-----------V 104
Query: 145 AEYMPNDTLAKHL-FHWEKQTIEWPLRLRV-AFYIAEALDYCNTEGRPLYH-DLNAYRVL 201
EY+P DTL + ++ +Q P+ ++V F + ++ + + H D+ + VL
Sbjct: 105 MEYVP-DTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVL 163
Query: 202 FDE-DGDPRLSCFGLMKN---SMDGKSYSTNLAYTPPEYLKNGRVIPESV-IYSFGTVLL 256
+E DG +L FG K S +Y + Y PE + + +V I+S G +
Sbjct: 164 VNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFA 223
Query: 257 DLLSGKHIPPS-------HALDMIRG----ENLNLLMDSHLE---------------GKF 290
+++ G+ I H + + G E L L SH +
Sbjct: 224 EMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDH 283
Query: 291 SSEEATQVVGLASQCLQYEPRER---------PSTKNLVVTLARLQTKSDVPSNVMLRVS 341
S ++A + L S LQY P ER P L +L D+P ++ +
Sbjct: 284 SLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPATKLPNNKDLPEDLFRFLP 343
Query: 342 KHEEAQSTPQR 352
E S Q+
Sbjct: 344 NEIEVMSEAQK 354
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG------LMKNSMDGKSY 225
RV + L Y + + L+ D+ A VL DG +L+ FG L KNS +
Sbjct: 129 RVMQMLLNGLYYIH-RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 226 S--TNLAYTPPEYLKNGR 241
+ L Y PPE L R
Sbjct: 188 NRVVTLWYRPPELLLGER 205
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.131 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,435,967
Number of Sequences: 62578
Number of extensions: 594492
Number of successful extensions: 1990
Number of sequences better than 100.0: 488
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 414
Number of HSP's that attempted gapping in prelim test: 1612
Number of HSP's gapped (non-prelim): 504
length of query: 508
length of database: 14,973,337
effective HSP length: 103
effective length of query: 405
effective length of database: 8,527,803
effective search space: 3453760215
effective search space used: 3453760215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)